Query 020546
Match_columns 325
No_of_seqs 269 out of 2004
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:15:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020546.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020546hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.3E-83 5E-88 570.5 18.0 296 14-320 2-298 (303)
2 PTZ00480 serine/threonine-prot 100.0 5.4E-76 1.2E-80 556.9 31.6 298 14-311 10-310 (320)
3 KOG0374 Serine/threonine speci 100.0 2.1E-75 4.7E-80 554.6 26.2 293 10-302 4-303 (331)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.2E-74 2.6E-79 544.3 29.0 288 15-302 2-292 (293)
5 cd07420 MPP_RdgC Drosophila me 100.0 5.3E-74 1.1E-78 544.0 31.6 283 11-299 3-320 (321)
6 PTZ00244 serine/threonine-prot 100.0 2.8E-74 6E-79 541.4 29.4 288 14-301 3-293 (294)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 7E-74 1.5E-78 537.2 28.8 283 15-303 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 1.9E-73 4E-78 537.5 30.7 286 15-306 3-290 (303)
9 KOG0373 Serine/threonine speci 100.0 7.3E-75 1.6E-79 509.2 16.8 286 14-305 5-292 (306)
10 smart00156 PP2Ac Protein phosp 100.0 7.3E-72 1.6E-76 521.0 29.8 270 33-302 1-270 (271)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.1E-71 2.4E-76 528.6 29.6 292 7-304 7-306 (316)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 3.3E-71 7.2E-76 523.9 31.4 284 15-304 3-299 (305)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.8E-69 3.9E-74 513.8 28.4 283 19-301 2-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 4E-67 8.6E-72 504.2 31.3 294 8-302 5-366 (377)
15 KOG0371 Serine/threonine prote 100.0 1.2E-65 2.6E-70 459.9 14.0 289 14-308 19-308 (319)
16 KOG0375 Serine-threonine phosp 100.0 1.2E-65 2.7E-70 477.1 11.7 262 31-292 59-333 (517)
17 KOG0377 Protein serine/threoni 100.0 6.9E-57 1.5E-61 427.2 14.4 286 10-301 116-431 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.2E-49 2.5E-54 385.0 14.7 272 32-304 182-460 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2E-36 4.3E-41 273.5 20.1 214 63-287 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 7.2E-27 1.6E-31 210.4 16.6 176 63-273 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 1.1E-26 2.4E-31 214.0 17.3 121 60-182 1-145 (245)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1.8E-24 4E-29 197.9 18.9 120 60-182 1-142 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 1.3E-24 2.8E-29 197.5 16.9 115 63-180 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 3.5E-24 7.7E-29 200.2 18.1 219 60-292 1-262 (275)
25 cd07422 MPP_ApaH Escherichia c 99.9 2.5E-24 5.5E-29 199.3 12.2 119 62-184 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 6.1E-24 1.3E-28 197.7 12.5 121 60-184 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 1.9E-23 4.1E-28 189.3 14.6 115 60-180 17-146 (218)
28 PHA02239 putative protein phos 99.9 7.5E-23 1.6E-27 187.4 15.2 172 60-273 1-219 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.1E-22 4.6E-27 180.9 16.2 168 60-258 1-183 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 5E-22 1.1E-26 185.4 16.5 195 61-286 3-290 (304)
31 PRK09968 serine/threonine-spec 99.9 1.9E-21 4.1E-26 176.4 12.2 115 60-180 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 3.1E-13 6.7E-18 112.1 11.4 159 60-254 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 3.1E-11 6.8E-16 102.8 14.2 82 61-179 1-85 (155)
34 PF12850 Metallophos_2: Calcin 99.3 2.8E-11 6.1E-16 102.3 11.7 137 60-272 1-137 (156)
35 PRK09453 phosphodiesterase; Pr 99.3 1.6E-10 3.5E-15 101.6 15.0 69 60-132 1-77 (182)
36 TIGR00040 yfcE phosphoesterase 99.2 1.8E-10 3.9E-15 98.9 13.2 63 60-131 1-64 (158)
37 cd07388 MPP_Tt1561 Thermus the 99.2 8.6E-10 1.9E-14 100.5 18.2 71 60-131 5-75 (224)
38 cd07379 MPP_239FB Homo sapiens 99.1 4.6E-10 9.9E-15 93.8 10.7 118 61-259 1-120 (135)
39 COG0639 ApaH Diadenosine tetra 99.1 2.3E-10 5E-15 94.7 6.9 143 133-276 3-154 (155)
40 cd07397 MPP_DevT Myxococcus xa 99.0 1.5E-09 3.3E-14 99.5 10.1 156 61-255 2-208 (238)
41 cd00838 MPP_superfamily metall 98.9 1.2E-08 2.6E-13 82.1 10.8 118 63-260 1-120 (131)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.9 2E-08 4.2E-13 87.4 12.2 66 62-133 1-67 (188)
43 cd07394 MPP_Vps29 Homo sapiens 98.9 9.4E-08 2E-12 84.1 15.1 59 61-131 1-65 (178)
44 cd07404 MPP_MS158 Microscilla 98.8 8.3E-09 1.8E-13 89.0 7.5 67 62-131 1-68 (166)
45 cd07403 MPP_TTHA0053 Thermus t 98.8 8.3E-08 1.8E-12 80.0 10.6 107 63-259 1-107 (129)
46 PRK05340 UDP-2,3-diacylglucosa 98.7 2.8E-07 6E-12 84.7 14.6 208 60-291 1-231 (241)
47 cd07400 MPP_YydB Bacillus subt 98.6 4.8E-07 1E-11 75.9 11.9 118 62-260 1-130 (144)
48 COG2129 Predicted phosphoester 98.6 3.3E-06 7.1E-11 76.2 17.6 204 59-291 3-217 (226)
49 COG0622 Predicted phosphoester 98.6 1.8E-06 3.9E-11 75.6 14.6 158 60-301 2-165 (172)
50 TIGR03729 acc_ester putative p 98.5 7.4E-07 1.6E-11 81.6 11.4 68 61-131 1-74 (239)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 1.2E-06 2.5E-11 80.1 12.5 205 62-291 1-229 (231)
52 cd07399 MPP_YvnB Bacillus subt 98.5 7.5E-06 1.6E-10 74.0 15.5 193 61-301 2-213 (214)
53 cd07383 MPP_Dcr2 Saccharomyces 98.3 1.7E-05 3.7E-10 70.5 14.9 70 60-129 3-87 (199)
54 cd07396 MPP_Nbla03831 Homo sap 98.3 8.1E-06 1.8E-10 76.1 12.7 73 61-133 2-88 (267)
55 cd07402 MPP_GpdQ Enterobacter 98.3 1.6E-05 3.5E-10 72.2 13.2 69 61-131 1-83 (240)
56 PRK11148 cyclic 3',5'-adenosin 98.2 7.3E-05 1.6E-09 69.9 16.4 70 60-131 15-98 (275)
57 cd07395 MPP_CSTP1 Homo sapiens 98.2 0.00012 2.6E-09 67.7 17.0 71 61-131 6-99 (262)
58 PRK11340 phosphodiesterase Yae 98.2 4.3E-06 9.3E-11 78.3 7.1 70 60-131 50-125 (271)
59 cd07385 MPP_YkuE_C Bacillus su 98.1 5.8E-06 1.3E-10 74.2 6.1 71 60-132 2-77 (223)
60 cd07393 MPP_DR1119 Deinococcus 98.1 5.1E-05 1.1E-09 69.4 12.2 67 62-130 1-83 (232)
61 PRK04036 DNA polymerase II sma 98.0 4.1E-05 8.9E-10 77.8 12.0 112 59-178 243-387 (504)
62 TIGR00619 sbcd exonuclease Sbc 97.9 3.7E-05 8.1E-10 71.3 7.3 73 60-132 1-89 (253)
63 KOG0376 Serine-threonine phosp 97.8 3.6E-06 7.9E-11 83.0 -0.7 242 32-277 14-299 (476)
64 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00024 5.2E-09 61.1 10.1 47 86-132 38-90 (156)
65 PHA02546 47 endonuclease subun 97.7 6.2E-05 1.3E-09 72.8 6.9 72 60-131 1-89 (340)
66 COG2908 Uncharacterized protei 97.6 0.00026 5.6E-09 64.6 8.9 194 64-293 2-229 (237)
67 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00011 2.4E-09 68.7 6.6 70 62-131 1-86 (262)
68 cd07401 MPP_TMEM62_N Homo sapi 97.6 0.00033 7.2E-09 65.0 9.8 71 62-132 2-90 (256)
69 cd07398 MPP_YbbF-LpxH Escheric 97.6 0.00016 3.5E-09 64.5 7.2 28 231-258 177-204 (217)
70 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00018 4E-09 62.6 7.3 58 75-132 30-89 (172)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00016 3.4E-09 64.6 6.3 74 61-134 1-92 (223)
72 PRK10966 exonuclease subunit S 97.5 0.00023 4.9E-09 70.6 7.0 72 60-132 1-88 (407)
73 cd07384 MPP_Cdc1_like Saccharo 97.5 0.0015 3.2E-08 57.1 10.9 49 84-132 43-101 (171)
74 cd00839 MPP_PAPs purple acid p 97.5 0.001 2.3E-08 62.3 10.6 70 60-133 5-83 (294)
75 TIGR00024 SbcD_rel_arch putati 97.4 0.0004 8.7E-09 63.4 7.3 72 60-132 15-103 (225)
76 PF06874 FBPase_2: Firmicute f 97.4 0.0022 4.8E-08 65.7 13.2 71 231-303 507-587 (640)
77 TIGR00583 mre11 DNA repair pro 97.4 0.00057 1.2E-08 67.7 7.8 73 60-132 4-124 (405)
78 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.00041 9E-09 60.1 5.8 67 62-133 1-84 (168)
79 cd07380 MPP_CWF19_N Schizosacc 97.3 0.0016 3.5E-08 55.8 9.2 119 63-254 1-121 (150)
80 COG1409 Icc Predicted phosphoh 97.3 0.00098 2.1E-08 61.6 8.2 74 60-135 1-82 (301)
81 PF14582 Metallophos_3: Metall 97.3 0.0012 2.5E-08 60.1 8.0 73 60-132 6-103 (255)
82 COG1408 Predicted phosphohydro 97.0 0.0059 1.3E-07 57.7 10.0 72 61-134 46-121 (284)
83 cd08163 MPP_Cdc1 Saccharomyces 96.9 0.027 5.8E-07 52.5 13.4 31 230-262 203-233 (257)
84 COG1311 HYS2 Archaeal DNA poly 96.7 0.027 5.9E-07 56.3 12.9 208 61-291 227-461 (481)
85 cd07386 MPP_DNA_pol_II_small_a 96.7 0.0055 1.2E-07 56.2 7.3 70 63-132 2-95 (243)
86 cd08166 MPP_Cdc1_like_1 unchar 96.5 0.0045 9.8E-08 55.3 5.6 46 86-131 42-93 (195)
87 COG4186 Predicted phosphoester 96.5 0.0061 1.3E-07 52.3 5.7 71 61-135 5-90 (186)
88 COG0420 SbcD DNA repair exonuc 96.2 0.013 2.8E-07 57.5 7.4 75 60-134 1-91 (390)
89 cd00845 MPP_UshA_N_like Escher 95.9 0.015 3.2E-07 53.3 5.5 66 61-131 2-82 (252)
90 KOG3325 Membrane coat complex 95.6 0.18 4E-06 43.0 10.6 116 62-260 3-124 (183)
91 cd08164 MPP_Ted1 Saccharomyces 95.6 0.027 5.8E-07 50.3 5.7 65 67-131 24-111 (193)
92 cd00842 MPP_ASMase acid sphing 95.4 0.18 4E-06 47.3 11.4 72 62-134 40-125 (296)
93 cd07387 MPP_PolD2_C PolD2 (DNA 95.3 0.52 1.1E-05 44.0 13.7 49 244-297 204-255 (257)
94 COG1407 Predicted ICC-like pho 95.0 0.074 1.6E-06 48.8 6.9 74 58-134 18-113 (235)
95 PLN02533 probable purple acid 95.0 0.032 7E-07 55.7 4.9 71 59-132 139-212 (427)
96 cd07378 MPP_ACP5 Homo sapiens 94.7 0.064 1.4E-06 49.7 5.9 70 61-131 2-83 (277)
97 cd07410 MPP_CpdB_N Escherichia 94.4 0.055 1.2E-06 50.5 4.7 65 61-130 2-94 (277)
98 PF08321 PPP5: PPP5 TPR repeat 93.9 0.18 4E-06 39.8 5.9 46 8-58 50-95 (95)
99 cd07408 MPP_SA0022_N Staphyloc 93.3 0.12 2.5E-06 47.9 4.6 69 61-131 2-82 (257)
100 KOG3662 Cell division control 92.3 0.26 5.5E-06 48.8 5.6 71 60-130 49-143 (410)
101 cd07412 MPP_YhcR_N Bacillus su 92.3 0.16 3.4E-06 48.0 4.0 66 61-131 2-88 (288)
102 COG1768 Predicted phosphohydro 92.1 0.26 5.7E-06 43.5 4.8 74 85-169 42-117 (230)
103 KOG3339 Predicted glycosyltran 90.4 2.9 6.3E-05 37.1 9.6 85 88-177 40-140 (211)
104 KOG2863 RNA lariat debranching 90.2 0.79 1.7E-05 44.5 6.5 74 60-133 1-90 (456)
105 cd07411 MPP_SoxB_N Thermus the 89.5 0.58 1.3E-05 43.4 5.0 65 61-131 2-95 (264)
106 KOG1432 Predicted DNA repair e 87.5 1.5 3.3E-05 42.3 6.4 48 85-133 99-149 (379)
107 PRK09419 bifunctional 2',3'-cy 87.4 0.69 1.5E-05 52.0 4.7 66 60-130 661-735 (1163)
108 cd07409 MPP_CD73_N CD73 ecto-5 87.1 1.3 2.9E-05 41.5 5.8 66 61-131 2-94 (281)
109 TIGR00282 metallophosphoestera 86.2 1.3 2.9E-05 41.4 5.2 67 60-131 1-71 (266)
110 PF04042 DNA_pol_E_B: DNA poly 86.1 1.2 2.6E-05 39.5 4.7 72 62-133 1-93 (209)
111 cd07406 MPP_CG11883_N Drosophi 85.4 1.6 3.4E-05 40.4 5.3 56 70-130 21-82 (257)
112 cd07405 MPP_UshA_N Escherichia 82.9 1.6 3.5E-05 41.1 4.2 66 61-131 2-87 (285)
113 KOG0918 Selenium-binding prote 82.8 0.038 8.2E-07 54.0 -6.8 194 87-291 48-250 (476)
114 KOG2476 Uncharacterized conser 81.9 2.8 6E-05 42.1 5.5 69 59-128 5-75 (528)
115 cd07407 MPP_YHR202W_N Saccharo 79.5 2.3 5E-05 40.1 4.0 66 61-131 7-97 (282)
116 COG0737 UshA 5'-nucleotidase/2 78.9 2.5 5.3E-05 43.2 4.3 67 60-131 27-115 (517)
117 KOG3947 Phosphoesterases [Gene 77.0 4.4 9.6E-05 38.1 4.9 93 32-132 25-127 (305)
118 cd07382 MPP_DR1281 Deinococcus 76.4 5.5 0.00012 37.1 5.5 66 61-131 1-70 (255)
119 cd08162 MPP_PhoA_N Synechococc 76.0 4.1 8.8E-05 39.0 4.6 65 61-130 2-90 (313)
120 PTZ00235 DNA polymerase epsilo 75.9 9.1 0.0002 36.4 6.8 73 60-132 28-123 (291)
121 PRK09558 ushA bifunctional UDP 70.9 5.6 0.00012 41.0 4.6 68 59-131 34-121 (551)
122 PTZ00422 glideosome-associated 70.9 7.6 0.00017 38.5 5.2 72 60-131 27-109 (394)
123 PF14164 YqzH: YqzH-like prote 70.2 15 0.00033 26.9 5.3 45 10-54 1-47 (64)
124 TIGR01390 CycNucDiestase 2',3' 70.1 5.7 0.00012 41.8 4.4 67 60-131 3-99 (626)
125 PRK09420 cpdB bifunctional 2', 69.0 6.7 0.00014 41.5 4.7 69 58-131 24-122 (649)
126 COG3855 Fbp Uncharacterized pr 68.5 4.8 0.0001 40.5 3.2 41 88-133 192-232 (648)
127 PRK09419 bifunctional 2',3'-cy 68.4 6.1 0.00013 44.6 4.5 42 60-101 42-100 (1163)
128 KOG2310 DNA repair exonuclease 61.3 26 0.00056 36.2 6.8 54 60-113 14-79 (646)
129 TIGR01530 nadN NAD pyrophospha 59.5 16 0.00034 37.8 5.2 65 62-131 3-94 (550)
130 PRK11907 bifunctional 2',3'-cy 58.1 14 0.00029 40.2 4.6 67 60-131 116-213 (814)
131 KOG2679 Purple (tartrate-resis 52.8 13 0.00028 35.1 3.0 71 60-131 44-126 (336)
132 PF02875 Mur_ligase_C: Mur lig 46.8 64 0.0014 24.3 5.7 72 57-128 9-82 (91)
133 PF12641 Flavodoxin_3: Flavodo 45.8 88 0.0019 26.9 6.9 102 63-183 2-116 (160)
134 PF15007 CEP44: Centrosomal sp 43.3 15 0.00031 30.9 1.6 85 67-165 1-87 (131)
135 PRK09418 bifunctional 2',3'-cy 42.5 32 0.00069 37.3 4.4 42 59-100 39-97 (780)
136 PF06874 FBPase_2: Firmicute f 41.1 24 0.00052 36.9 3.1 42 89-135 187-228 (640)
137 KOG2463 Predicted RNA-binding 39.1 93 0.002 30.2 6.4 90 225-324 206-307 (376)
138 smart00854 PGA_cap Bacterial c 35.6 62 0.0013 29.3 4.6 40 235-276 197-236 (239)
139 KOG1378 Purple acid phosphatas 34.7 65 0.0014 32.5 4.9 33 234-266 323-355 (452)
140 PF13258 DUF4049: Domain of un 32.1 1.6E+02 0.0036 27.3 6.6 57 118-181 127-186 (318)
141 PRK10773 murF UDP-N-acetylmura 31.6 1.8E+02 0.0039 29.1 7.6 66 60-126 325-392 (453)
142 COG4320 Uncharacterized protei 30.8 94 0.002 30.2 5.0 60 48-115 45-108 (410)
143 PF09949 DUF2183: Uncharacteri 30.0 1.4E+02 0.0031 23.6 5.3 43 73-124 53-95 (100)
144 TIGR00282 metallophosphoestera 29.9 39 0.00084 31.7 2.3 39 89-131 2-41 (266)
145 TIGR03439 methyl_EasF probable 29.7 5.1E+02 0.011 24.9 11.2 97 62-160 132-233 (319)
146 cd07381 MPP_CapA CapA and rela 29.1 77 0.0017 28.6 4.1 39 235-275 199-237 (239)
147 cd07382 MPP_DR1281 Deinococcus 28.0 68 0.0015 29.8 3.6 37 89-126 1-37 (255)
148 PF09637 Med18: Med18 protein; 26.9 98 0.0021 28.6 4.4 38 231-271 139-176 (250)
149 PF09587 PGA_cap: Bacterial ca 23.5 1.3E+02 0.0028 27.3 4.6 40 235-276 208-247 (250)
150 PRK02135 hypothetical protein; 21.6 4.3E+02 0.0093 23.8 7.2 24 60-83 147-170 (201)
151 cd03035 ArsC_Yffb Arsenate Red 21.5 2.3E+02 0.0049 22.4 5.0 23 43-67 75-97 (105)
152 PF06861 BALF1: BALF1 protein; 20.5 1.6E+02 0.0034 25.9 4.0 85 31-133 51-135 (182)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-83 Score=570.52 Aligned_cols=296 Identities=47% Similarity=0.931 Sum_probs=282.6
Q ss_pred HHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeee
Q 020546 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (325)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfL 93 (325)
+++..|+++.+. ..+.++++..||.++.++|.+|+++++++.|++|+|||||+++||..+|+..|-+|+++|+||
T Consensus 2 dldr~ie~L~~~-----~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFL 76 (303)
T KOG0372|consen 2 DLDRQIEQLRRC-----ELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFL 76 (303)
T ss_pred cHHHHHHHHHhc-----CCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEee
Confidence 477888888776 357899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh-HHHHHHHhhhhhcCCeEEEEcCcE
Q 020546 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKI 172 (325)
Q Consensus 94 GD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~i 172 (325)
|||||||-+|+|++.+|+.||++||++|++||||||++.+++.|||++||.++|+ ..+|+.+.+.|+.||++|+|++++
T Consensus 77 GDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ki 156 (303)
T KOG0372|consen 77 GDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKI 156 (303)
T ss_pred cchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcE
Confidence 9999999999999999999999999999999999999999999999999999995 689999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeE
Q 020546 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (325)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~ 252 (325)
||||||+||.++++|||+.+.|-.++|..+.++|+|||||++. .+|.-||||+|+.||.+++++|++.||++.|+|+||
T Consensus 157 fCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQ 235 (303)
T KOG0372|consen 157 FCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQ 235 (303)
T ss_pred EEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 699999999999999999999999999999999999
Q ss_pred eeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCCCCCCCcCCCCCCCCCC
Q 020546 253 VVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKSLPSSSNSKLPLKKPP 320 (325)
Q Consensus 253 ~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (325)
.+.+||++.++++++|||||||||+.++|.|||+.+|++....|.+|+.++...+ +.|-|||-
T Consensus 236 Lv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~-----~~~~kk~~ 298 (303)
T KOG0372|consen 236 LVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR-----GIPAKKPI 298 (303)
T ss_pred HHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc-----CCcccCcc
Confidence 9999999999999999999999999999999999999999999999998876665 36666663
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=5.4e-76 Score=556.86 Aligned_cols=298 Identities=72% Similarity=1.309 Sum_probs=283.8
Q ss_pred HHHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCce
Q 020546 14 VLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANY 90 (325)
Q Consensus 14 ~~~~~i~~~~~~~---~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~ 90 (325)
+++++|+++++.. ++....|+++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 4888999998763 2445679999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcC
Q 020546 91 LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE 170 (325)
Q Consensus 91 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~ 170 (325)
||||||||||++++||+.+++++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|+.||+||++++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~ 169 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDE 169 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEe
Q 020546 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (325)
Q Consensus 171 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrg 250 (325)
++||||||++|.+.++++|++++||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++|++++||||
T Consensus 170 ~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~ 249 (320)
T PTZ00480 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRA 249 (320)
T ss_pred cEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEc
Confidence 99999999999999999999999999999999999999999998788999999999999999999999999999999999
Q ss_pred eEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCCCCCCCcC
Q 020546 251 HQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKSLPSSSN 311 (325)
Q Consensus 251 H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~~~ 311 (325)
||++++||++.++++|+||||||+||+..+|+||++.+++++.++|++|+|.+.+..-+.+
T Consensus 250 Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~ 310 (320)
T PTZ00480 250 HQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGASQQ 310 (320)
T ss_pred CccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccccccccc
Confidence 9999999999999999999999999999999999999999999999999988776554443
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.1e-75 Score=554.56 Aligned_cols=293 Identities=69% Similarity=1.213 Sum_probs=281.4
Q ss_pred CChHHHHHHHHHHHccC---CCc--cccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcC-
Q 020546 10 MDKVVLDDIIRRLLEGR---GGK--QVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGG- 83 (325)
Q Consensus 10 ~~~~~~~~~i~~~~~~~---~~~--~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~- 83 (325)
+....++++|.+++... ..+ +..++++++.+||..+.++|..+|+++++++||.|+|||||++.||.++|...|
T Consensus 4 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~ 83 (331)
T KOG0374|consen 4 MASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGS 83 (331)
T ss_pred cchhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCC
Confidence 45567888888888763 222 456999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh-HHHHHHHhhhhhcC
Q 020546 84 YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCL 162 (325)
Q Consensus 84 ~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~L 162 (325)
+|++++|||||||||||++|+|++.+|+++|++||++|++||||||.+.++..|||++||.++|+ ..+|..+++.|..|
T Consensus 84 ~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~m 163 (331)
T KOG0374|consen 84 FPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCL 163 (331)
T ss_pred CCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 69999999999999
Q ss_pred CeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhC
Q 020546 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (325)
Q Consensus 163 Plaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~ 242 (325)
|++|+|+++++|+|||++|.+.++++|+.|.||.+.++.++++|++||||.....+|.+|.||.++.||++++++||+++
T Consensus 164 p~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~ 243 (331)
T KOG0374|consen 164 PLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKL 243 (331)
T ss_pred chhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCC
Q 020546 243 DLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (325)
Q Consensus 243 ~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 302 (325)
++++||||||++++||+++.+++++||||||+||+.++|.||++.+|+++.++|++++|.
T Consensus 244 ~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 244 DLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred CcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999995
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.2e-74 Score=544.29 Aligned_cols=288 Identities=76% Similarity=1.376 Sum_probs=276.7
Q ss_pred HHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCcee
Q 020546 15 LDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYL 91 (325)
Q Consensus 15 ~~~~i~~~~~~~---~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~v 91 (325)
++++|+++++.. .+....|+++++.+||++++++|++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 567888888763 35566899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCc
Q 020546 92 FLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEK 171 (325)
Q Consensus 92 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~ 171 (325)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEee
Q 020546 172 ILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGH 251 (325)
Q Consensus 172 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH 251 (325)
++|||||++|.+.++++|++++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred EeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCC
Q 020546 252 QVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (325)
Q Consensus 252 ~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 302 (325)
|++++||+++++++|+||||||+||+..+|+||++.+++++.++|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=5.3e-74 Score=543.96 Aligned_cols=283 Identities=37% Similarity=0.669 Sum_probs=260.2
Q ss_pred ChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEcCCCCCHHHHHHHHHhcCCCC
Q 020546 11 DKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPP 86 (325)
Q Consensus 11 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~----~i~ViGDIHG~~~~L~~il~~~~~~~ 86 (325)
+.++++.+|+++.+.. .|+++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..|+++
T Consensus 3 ~~~~~~~~i~~~~~~~-----~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~ 77 (321)
T cd07420 3 TKDHIDALIEAFKEKQ-----LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPS 77 (321)
T ss_pred CHHHHHHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCC
Confidence 5678999999998652 58899999999999999999999999976 89999999999999999999999885
Q ss_pred -CCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh---HHHHHHHhhhhhcC
Q 020546 87 -TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKIFTDCFNCL 162 (325)
Q Consensus 87 -~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~~L 162 (325)
.++|||||||||||++|+||+.+|++||+.+|++|++||||||.+.++..|||.+||..+|+ ..+|+.+.++|+.|
T Consensus 78 ~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~L 157 (321)
T cd07420 78 PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWL 157 (321)
T ss_pred ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999999999999999999999999999999999999996 78999999999999
Q ss_pred CeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCC-----CCC----------------------CchhhhccccCCCCC
Q 020546 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPTD-----IPD----------------------NGLLCDLLWSDPDAN 215 (325)
Q Consensus 163 Plaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~-----~~~----------------------~~~~~dlLWsdP~~~ 215 (325)
|+||++++++|||||||+| ..++++|++++|+.. +|. .+++.|+|||||...
T Consensus 158 Plaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~ 236 (321)
T cd07420 158 PLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQ 236 (321)
T ss_pred CceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccC
Confidence 9999999999999999997 678999999988421 111 146789999999876
Q ss_pred CCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeE
Q 020546 216 IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCS 295 (325)
Q Consensus 216 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~ 295 (325)
...|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||++.+++++.++
T Consensus 237 ~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~ 316 (321)
T cd07420 237 KGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPH 316 (321)
T ss_pred CCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCcee
Confidence 55577789999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEE
Q 020546 296 FEIL 299 (325)
Q Consensus 296 ~~~~ 299 (325)
|.+|
T Consensus 317 f~~~ 320 (321)
T cd07420 317 FVQY 320 (321)
T ss_pred EEEe
Confidence 8876
No 6
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.8e-74 Score=541.44 Aligned_cols=288 Identities=56% Similarity=1.087 Sum_probs=275.0
Q ss_pred HHHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCce
Q 020546 14 VLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANY 90 (325)
Q Consensus 14 ~~~~~i~~~~~~~---~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~ 90 (325)
-++++|.++++.. .+....++++++.+||++++++|++||++++++.|++||||||||+.+|.++|+..++++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 4677888888763 2345578999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcC
Q 020546 91 LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE 170 (325)
Q Consensus 91 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~ 170 (325)
||||||||||++|+||+.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|+.+.++|+.||++|++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEe
Q 020546 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (325)
Q Consensus 171 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrg 250 (325)
+++|||||++|.+.+++++++++||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++|++++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999998778999999999999999999999999999999999
Q ss_pred eEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcC
Q 020546 251 HQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKP 301 (325)
Q Consensus 251 H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 301 (325)
||++++||+++++++|+||||||+||+..+|+||++.+++++.++|.++++
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999998765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=7e-74 Score=537.16 Aligned_cols=283 Identities=51% Similarity=0.980 Sum_probs=271.6
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeec
Q 020546 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (325)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (325)
++++|+++++. ..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|||||
T Consensus 2 ~~~~~~~~~~~-----~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLG 76 (285)
T cd07415 2 LDKWIEQLKKC-----ELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLG 76 (285)
T ss_pred HHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEe
Confidence 67788888764 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh-HHHHHHHhhhhhcCCeEEEEcCcEE
Q 020546 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (325)
Q Consensus 95 D~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il 173 (325)
||||||++|+||+.++++||+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|..+.++|+.||++|+++++++
T Consensus 77 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~ 156 (285)
T cd07415 77 DYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIF 156 (285)
T ss_pred EECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEE
Confidence 999999999999999999999999999999999999999999999999999997 4899999999999999999999999
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEe
Q 020546 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (325)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~ 253 (325)
|||||++|.+.++++|++++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++||||||+
T Consensus 157 cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 235 (285)
T cd07415 157 CVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL 235 (285)
T ss_pred EEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc
Confidence 999999999999999999999999999999999999999865 7899999999999999999999999999999999999
Q ss_pred eecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCC
Q 020546 254 VEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPAD 303 (325)
Q Consensus 254 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 303 (325)
+++||++.++++|+||||||+||+..+|+||++.+++++++++.+|+|.+
T Consensus 236 ~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 236 VMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999864
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.9e-73 Score=537.52 Aligned_cols=286 Identities=46% Similarity=0.928 Sum_probs=271.8
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeec
Q 020546 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (325)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (325)
++++|+.+.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||
T Consensus 3 ~~~~~~~~~~~~-----~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLG 77 (303)
T PTZ00239 3 IDRHIATLLNGG-----CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIG 77 (303)
T ss_pred HHHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEee
Confidence 678888887642 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhH-HHHHHHhhhhhcCCeEEEEcCcEE
Q 020546 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALINEKIL 173 (325)
Q Consensus 95 D~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaa~i~~~il 173 (325)
||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.++|++||++|+++++++
T Consensus 78 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~ 157 (303)
T PTZ00239 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQIL 157 (303)
T ss_pred eEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEE
Confidence 9999999999999999999999999999999999999999999999999999964 799999999999999999999999
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEe
Q 020546 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (325)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~ 253 (325)
|||||++|.+.++++|+++.||.+.|..++++|+|||||.. ..+|.+|+||.|+.||++++++||++|++++||||||+
T Consensus 158 cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 236 (303)
T PTZ00239 158 CVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL 236 (303)
T ss_pred EEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh
Confidence 99999999999999999999999999999999999999984 47899999999999999999999999999999999999
Q ss_pred eecCeEEecCC-eEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCCCC
Q 020546 254 VEDGYEFFARR-RLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKSL 306 (325)
Q Consensus 254 ~~~G~~~~~~~-~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 306 (325)
+++||++.+++ +|+||||||+||+..+|+||++.+++++++.|..|+|.+.+.
T Consensus 237 ~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 237 VMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred hccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 99999987654 599999999999999999999999999999999999987764
No 9
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-75 Score=509.15 Aligned_cols=286 Identities=45% Similarity=0.906 Sum_probs=275.7
Q ss_pred HHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeee
Q 020546 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (325)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfL 93 (325)
++++-|+.+...+ .|+++++..||+-++++|..|.++..++.|+.|+|||||+|.||.++|+..|-.|++.|||+
T Consensus 5 d~d~wi~~vk~ck-----yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFm 79 (306)
T KOG0373|consen 5 DLDQWIETVKKCK-----YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFM 79 (306)
T ss_pred CHHHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEe
Confidence 5788888886653 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh-HHHHHHHhhhhhcCCeEEEEcCcE
Q 020546 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKI 172 (325)
Q Consensus 94 GD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~i 172 (325)
|||||||-+|+|++.+++.||.+||.++.+||||||++.+...|||++||+.+|+ ..+|+.+.++|+.|+++|+|++++
T Consensus 80 GDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~v 159 (306)
T KOG0373|consen 80 GDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKV 159 (306)
T ss_pred ccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcE
Confidence 9999999999999999999999999999999999999999999999999999995 579999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeE
Q 020546 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (325)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~ 252 (325)
+|||||+||++.++|||+.+.|..++|..+.++|++||||+. ++.|.-|+||+|+.||.+++.+|..-|++++|+|+||
T Consensus 160 LCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQ 238 (306)
T KOG0373|consen 160 LCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQ 238 (306)
T ss_pred EEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhHHH
Confidence 999999999999999999999999999999999999999975 7999999999999999999999999999999999999
Q ss_pred eeecCeEEecCCe-EEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCCC
Q 020546 253 VVEDGYEFFARRR-LVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (325)
Q Consensus 253 ~~~~G~~~~~~~~-~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 305 (325)
.+++||++.+++| ++|||||||||+.++|.|+|+.++++++.++++|.+.+..
T Consensus 239 LV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 239 LVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 9999999998888 9999999999999999999999999999999999987665
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.3e-72 Score=520.97 Aligned_cols=270 Identities=58% Similarity=1.055 Sum_probs=262.5
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHH
Q 020546 33 LSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLA 112 (325)
Q Consensus 33 l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 112 (325)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhcc
Q 020546 113 YKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNI 192 (325)
Q Consensus 113 Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i 192 (325)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|+.||++|+++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeC
Q 020546 193 SRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (325)
Q Consensus 193 ~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa 272 (325)
+||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||++.++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeEEEecCCceeEEEEEcCC
Q 020546 273 PNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (325)
Q Consensus 273 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 302 (325)
|+||+..+|+||++.++++.++++.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999998875
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.1e-71 Score=528.62 Aligned_cols=292 Identities=41% Similarity=0.797 Sum_probs=274.0
Q ss_pred cCC-CChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----EEEEcCCCCCHHHHHHHHHh
Q 020546 7 EGM-MDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAP----IRICGDVHGQYQDLLRLFEH 81 (325)
Q Consensus 7 ~~~-~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~----i~ViGDIHG~~~~L~~il~~ 81 (325)
++. .+.+.++++++++.... .|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+.
T Consensus 7 ~~~~i~~~~~~~~~~~~~~~~-----~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 7 EDEKVTLEFVKEMIEWFKDQK-----KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CCCCCCHHHHHHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 444 78889999999997652 588999999999999999999999999866 99999999999999999999
Q ss_pred cCCCCC-CceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhh
Q 020546 82 GGYPPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFN 160 (325)
Q Consensus 82 ~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~ 160 (325)
.++++. ++|||||||||||++|+||+.++++||+.+|.+|++||||||.+.++..|||..|+..+|+..+|+.+.++|+
T Consensus 82 ~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~ 161 (316)
T cd07417 82 NGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFN 161 (316)
T ss_pred cCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHH
Confidence 998765 4699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcCcEEEecCCC-CCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHH
Q 020546 161 CLPVAALINEKILCMHGGL-SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFL 239 (325)
Q Consensus 161 ~LPlaa~i~~~il~vHgGi-~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl 239 (325)
+||++++++++++|||||+ +|...++++++++.|+.+.+.+++++|+|||||... .+|.+|+||.|+.||++++++||
T Consensus 162 ~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl 240 (316)
T cd07417 162 WLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFL 240 (316)
T ss_pred hchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHH
Confidence 9999999999999999999 567899999999999998888999999999999864 68999999999999999999999
Q ss_pred HhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecC-CceeEEEEEcCCCC
Q 020546 240 DKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNE-SLVCSFEILKPADK 304 (325)
Q Consensus 240 ~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~ 304 (325)
++||+++||||||++++||++.++++|+|||||||||+..+|+||++.+++ +++++|++|+|.+.
T Consensus 241 ~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 241 EENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred HHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCC
Confidence 999999999999999999999999999999999999999999999999999 88999999987644
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.3e-71 Score=523.86 Aligned_cols=284 Identities=41% Similarity=0.793 Sum_probs=265.4
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeec
Q 020546 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (325)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLG 94 (325)
++-+++.+.+. ..|+++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||
T Consensus 3 ~~~~~~~~~~~-----~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLG 77 (305)
T cd07416 3 IDVLKAHFMRE-----GRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLG 77 (305)
T ss_pred HHHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEEC
Confidence 45566666544 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEE
Q 020546 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILC 174 (325)
Q Consensus 95 D~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~ 174 (325)
||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||..++..+|+.++|+.+.++|++||++|+++++++|
T Consensus 78 DyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~ 157 (305)
T cd07416 78 DYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLC 157 (305)
T ss_pred CccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCC------CcccC-CCCcccccChhHHHHHHHhCCCceE
Q 020546 175 MHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIE------GWADS-DRGVSCTFGSDVVADFLDKNDLDLI 247 (325)
Q Consensus 175 vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~------~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~i 247 (325)
||||++|.+.++++|++++||.+.+..++++|+|||||..... +|.++ +||.|+.||++++++||++||+++|
T Consensus 158 vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~i 237 (305)
T cd07416 158 VHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSI 237 (305)
T ss_pred EcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999999999999999975432 47765 8999999999999999999999999
Q ss_pred EEeeEeeecCeEEecCC------eEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCC
Q 020546 248 CRGHQVVEDGYEFFARR------RLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADK 304 (325)
Q Consensus 248 IrgH~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 304 (325)
|||||++++||++++++ +|+|||||||||+..+|+||++.++++. ..+++|+|.+.
T Consensus 238 iR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 238 IRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred EEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 99999999999998876 8999999999999999999999999885 68999988764
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.8e-69 Score=513.79 Aligned_cols=283 Identities=47% Similarity=0.871 Sum_probs=262.0
Q ss_pred HHHHHccCC-----CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCC------
Q 020546 19 IRRLLEGRG-----GKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPT------ 87 (325)
Q Consensus 19 i~~~~~~~~-----~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~------ 87 (325)
|.+++.+.. ..+..|+++++.+||++|+++|++||++++++.|++||||||||+++|.++|+..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~ 81 (311)
T cd07419 2 ITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDI 81 (311)
T ss_pred hHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCC
Confidence 566776622 235679999999999999999999999999999999999999999999999999998754
Q ss_pred --CceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhH------HHHHHHhhhh
Q 020546 88 --ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV------RLWKIFTDCF 159 (325)
Q Consensus 88 --~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~f 159 (325)
.+|||||||||||++|+||+.++++|++.+|.+|++||||||.+.++..+||..++..+|+. .+|..+.++|
T Consensus 82 ~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f 161 (311)
T cd07419 82 EYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLF 161 (311)
T ss_pred cCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988864 6999999999
Q ss_pred hcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCC-CCCCCchhhhccccCCCCC--CCCcccCC---CCcc--cccC
Q 020546 160 NCLPVAALINEKILCMHGGLSPELENLDQIRNISRPT-DIPDNGLLCDLLWSDPDAN--IEGWADSD---RGVS--CTFG 231 (325)
Q Consensus 160 ~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~-~~~~~~~~~dlLWsdP~~~--~~~~~~~~---rg~g--~~fg 231 (325)
+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|+|||||... ..+|.+++ ||.| +.||
T Consensus 162 ~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg 241 (311)
T cd07419 162 EWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFG 241 (311)
T ss_pred HhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeEC
Confidence 9999999999999999999999999999999999998 4566788999999999864 45777776 9998 6999
Q ss_pred hhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcC
Q 020546 232 SDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKP 301 (325)
Q Consensus 232 ~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 301 (325)
++++++||++||+++||||||++++||++.++++|+||||||+||+..+|+||++.+++++++++.+++|
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=4e-67 Score=504.21 Aligned_cols=294 Identities=34% Similarity=0.645 Sum_probs=259.4
Q ss_pred CCCChHHHHHHHHHHHccC----C-CccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEcCCCCCHHHHHHH
Q 020546 8 GMMDKVVLDDIIRRLLEGR----G-GKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRL 78 (325)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~----~-~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~----~~i~ViGDIHG~~~~L~~i 78 (325)
|..+.+.++++|+++.+.. + .....++.+++.+||++|+++|++||++++++ .|++||||||||+.+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~l 84 (377)
T cd07418 5 GALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFL 84 (377)
T ss_pred CccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHH
Confidence 4467888999999996651 1 11234789999999999999999999999998 7999999999999999999
Q ss_pred HHhcCCCCCC-ceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHh---HHHHHH
Q 020546 79 FEHGGYPPTA-NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKI 154 (325)
Q Consensus 79 l~~~~~~~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~ 154 (325)
|+..++++.+ .|||||||||||++|+||+.++++||+.+|.+|++||||||.+.++..|||.+++..+|+ ..+|+.
T Consensus 85 l~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~ 164 (377)
T cd07418 85 LEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRK 164 (377)
T ss_pred HHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHH
Confidence 9999998754 599999999999999999999999999999999999999999999999999999999996 379999
Q ss_pred HhhhhhcCCeEEEEcCcEEEecCCC---------------------------CCCCCCHHHhhccCCCC-CCCCCc---h
Q 020546 155 FTDCFNCLPVAALINEKILCMHGGL---------------------------SPELENLDQIRNISRPT-DIPDNG---L 203 (325)
Q Consensus 155 ~~~~f~~LPlaa~i~~~il~vHgGi---------------------------~p~~~~l~~i~~i~rp~-~~~~~~---~ 203 (325)
+.++|++||++|++++++||||||| +|.+.++++|++++||. +.+..+ +
T Consensus 165 ~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i 244 (377)
T cd07418 165 CLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLI 244 (377)
T ss_pred HHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccc
Confidence 9999999999999999999999999 44567999999999984 555444 4
Q ss_pred hhhccccCCCCCCCCcccC-CCCcccccChhHHHHHHHhCCCceEEEeeEe------------eecCeEEecC---CeEE
Q 020546 204 LCDLLWSDPDANIEGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQV------------VEDGYEFFAR---RRLV 267 (325)
Q Consensus 204 ~~dlLWsdP~~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~------------~~~G~~~~~~---~~~i 267 (325)
++|+|||||... .+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+
T Consensus 245 ~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~li 323 (377)
T cd07418 245 PGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLI 323 (377)
T ss_pred ceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEE
Confidence 789999999864 567665 7999999999999999999999999999996 6799999887 9999
Q ss_pred EEeeCCCCC------CCCCCceeEEEecCCc--eeEEEEEcCC
Q 020546 268 TIFSAPNYG------GEFDNAGALLSVNESL--VCSFEILKPA 302 (325)
Q Consensus 268 TvfSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~ 302 (325)
||||||||| +.++|+||++.++.+- ..+|++|+.+
T Consensus 324 TvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 324 TLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 999999999 5789999999986643 5667666543
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-65 Score=459.86 Aligned_cols=289 Identities=47% Similarity=0.916 Sum_probs=275.0
Q ss_pred HHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeee
Q 020546 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (325)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfL 93 (325)
+++.-|+.+... .++++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++++..|..++..|+|+
T Consensus 19 ~vd~~ie~L~~c-----k~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfm 93 (319)
T KOG0371|consen 19 DVDPWIEQLYKC-----KPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFM 93 (319)
T ss_pred ccccchHHHHhc-----CCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeee
Confidence 456677777665 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHH-hHHHHHHHhhhhhcCCeEEEEcCcE
Q 020546 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALINEKI 172 (325)
Q Consensus 94 GD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPlaa~i~~~i 172 (325)
|||||||++|.|++.++.++|++||++|.+||||||.+.+.+.|||++||.++| +..+|..|.+.|+.+|++|+|++++
T Consensus 94 GDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~i 173 (319)
T KOG0371|consen 94 GDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKI 173 (319)
T ss_pred eeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccce
Confidence 999999999999999999999999999999999999999999999999999999 5679999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeE
Q 020546 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (325)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~ 252 (325)
+|+|||++|.+.+++.++.+.|..++|.++.++|+|||||... .+|..++||.|+.||++..++|-.+||++++-|+||
T Consensus 174 fc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr-~gwg~sprgag~tfg~di~~~fn~~n~lslisRahq 252 (319)
T KOG0371|consen 174 FCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDR-CGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQ 252 (319)
T ss_pred eeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccC-CCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHH
Confidence 9999999999999999999999889999999999999999854 799999999999999999999999999999999999
Q ss_pred eeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEEcCCCCCCCC
Q 020546 253 VVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKSLPS 308 (325)
Q Consensus 253 ~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~ 308 (325)
.+.+||.+.+...++|+|||||||+.++|.+|++.+++.....|.+|+|++.+...
T Consensus 253 lvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~ 308 (319)
T KOG0371|consen 253 LVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEP 308 (319)
T ss_pred HHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcccccc
Confidence 99999999999999999999999999999999999999999999999997665543
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.2e-65 Score=477.08 Aligned_cols=262 Identities=42% Similarity=0.832 Sum_probs=249.4
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHH
Q 020546 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL 110 (325)
Q Consensus 31 ~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll 110 (325)
.+++++..+.|+.++..+|++|+++++++.||.|+|||||||.||.++|+..|-|..++|+|||||||||.+|+||+.+|
T Consensus 59 Grl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYL 138 (517)
T KOG0375|consen 59 GRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYL 138 (517)
T ss_pred cchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhh
Q 020546 111 LAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIR 190 (325)
Q Consensus 111 ~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~ 190 (325)
.+||+.||..+++||||||++.+..++.|.+||.-+|+.++|+++.+.|+.||+||+.++++||||||+||++.++++|+
T Consensus 139 wsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr 218 (517)
T KOG0375|consen 139 WSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIR 218 (517)
T ss_pred HHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCchhhhccccCCCCCC------CCcccC-CCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecC
Q 020546 191 NISRPTDIPDNGLLCDLLWSDPDANI------EGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFAR 263 (325)
Q Consensus 191 ~i~rp~~~~~~~~~~dlLWsdP~~~~------~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~ 263 (325)
++.|..++|..+++||+|||||.++. ..|.+| .||++|.|...|+++||+.||+--|||+|+.++.||+.+.+
T Consensus 219 ~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrk 298 (517)
T KOG0375|consen 219 KLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRK 298 (517)
T ss_pred hhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhc
Confidence 99999999999999999999998652 234444 69999999999999999999999999999999999998765
Q ss_pred Ce------EEEEeeCCCCCCCCCCceeEEEecCCc
Q 020546 264 RR------LVTIFSAPNYGGEFDNAGALLSVNESL 292 (325)
Q Consensus 264 ~~------~iTvfSa~~y~~~~~n~ga~l~i~~~~ 292 (325)
.+ +|||||||||.+.++|+|||+..+++.
T Consensus 299 sqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV 333 (517)
T KOG0375|consen 299 SQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 333 (517)
T ss_pred ccccCCchheeeecCCchhhhhccHHHHhhhhccc
Confidence 43 899999999999999999999987764
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-57 Score=427.19 Aligned_cols=286 Identities=34% Similarity=0.656 Sum_probs=255.9
Q ss_pred CChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEcCCCCCHHHHHHHHHhcCCC
Q 020546 10 MDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRLFEHGGYP 85 (325)
Q Consensus 10 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~~----~~i~ViGDIHG~~~~L~~il~~~~~~ 85 (325)
.....++.+|+..... -.|++..++.|+.+|+++|++-|++-+++ ..|+|+||+||.++||.-+|.+.|+|
T Consensus 116 l~~~~i~~lieaFk~k-----q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 116 LRKNHIDLLIEAFKKK-----QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred cCchHHHHHHHHHHHh-----hhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 4455677777776443 26899999999999999999999999985 36999999999999999999999999
Q ss_pred CCC-ceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHH---hHHHHHHHhhhhhc
Q 020546 86 PTA-NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF---NVRLWKIFTDCFNC 161 (325)
Q Consensus 86 ~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~ 161 (325)
..+ -|||.||+||||.+|+|||+.|+++-+.||..+++-|||||+..+|..|||..|+..+| +.++.+.+.++|++
T Consensus 191 S~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~W 270 (631)
T KOG0377|consen 191 SSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRW 270 (631)
T ss_pred CCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHh
Confidence 865 59999999999999999999999999999999999999999999999999999999999 56899999999999
Q ss_pred CCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCC-----CCC-----------------CCchhhhccccCCCCCCCCc
Q 020546 162 LPVAALINEKILCMHGGLSPELENLDQIRNISRPT-----DIP-----------------DNGLLCDLLWSDPDANIEGW 219 (325)
Q Consensus 162 LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~-----~~~-----------------~~~~~~dlLWsdP~~~~~~~ 219 (325)
||++.++++++|+||||+|. .++++-+.+|+|.. .+| ++..+.|+|||||.....+|
T Consensus 271 LPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~ 349 (631)
T KOG0377|consen 271 LPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCV 349 (631)
T ss_pred cchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCC
Confidence 99999999999999999974 56777777766531 111 24567899999999887788
Q ss_pred ccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEE
Q 020546 220 ADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEIL 299 (325)
Q Consensus 220 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 299 (325)
.+.-||.|++||++++.+||++++++++||+|+|.++||++.++++|+|||||+||....+|+||++.+...+.-.|.++
T Consensus 350 pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY 429 (631)
T KOG0377|consen 350 PNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQY 429 (631)
T ss_pred cccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999988777665
Q ss_pred cC
Q 020546 300 KP 301 (325)
Q Consensus 300 ~~ 301 (325)
..
T Consensus 430 ~a 431 (631)
T KOG0377|consen 430 QA 431 (631)
T ss_pred Hh
Confidence 54
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.2e-49 Score=385.01 Aligned_cols=272 Identities=43% Similarity=0.808 Sum_probs=255.6
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEcCCCCCHHHHHHHHHhcCCCCC-CceeeecCccCCCCCcHHH
Q 020546 32 QLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLET 106 (325)
Q Consensus 32 ~l~~~~~~~l~~~~~~~l~~ep~~l~~~~----~i~ViGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~ev 106 (325)
.+....+-.|+..+.++++++|++++++. .+.|+||+||++.++.+++...|.|+. ..|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 46667778899999999999999999864 589999999999999999999999876 4699999999999999999
Q ss_pred HHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCC-CCCCC
Q 020546 107 ICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLS-PELEN 185 (325)
Q Consensus 107 l~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~-p~~~~ 185 (325)
...++..|+.+|+++|++|||||+..++..|||..++..+|..+.+..+.+.|..||++..++++++.+|||+. |.-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 45578
Q ss_pred HHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCe
Q 020546 186 LDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRR 265 (325)
Q Consensus 186 l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~ 265 (325)
++++++|.|+...++.+..+++|||||... .|..+|.||.|..||++++++||+.|+++.|||||+..+.||+..++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988899999999999999865 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCCCCCCCCceeEEEec-CCceeEEEEEcCCCC
Q 020546 266 LVTIFSAPNYGGEFDNAGALLSVN-ESLVCSFEILKPADK 304 (325)
Q Consensus 266 ~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~ 304 (325)
|+|||||||||...+|.||++.++ ++++..+..|+|.+.
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~ 460 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPH 460 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCC
Confidence 999999999999999999999998 678888999986543
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2e-36 Score=273.46 Aligned_cols=214 Identities=53% Similarity=0.846 Sum_probs=177.5
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHH
Q 020546 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 142 (325)
+|||||||++++|.++++..+..+.+++||||||||||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 489999999999999999999988999999999999999999999999999877 8899999999999998876665543
Q ss_pred H---------HHHHhHHHHHHHhhhhhcCCeEEEEcC-cEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCC
Q 020546 143 C---------KRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDP 212 (325)
Q Consensus 143 ~---------~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP 212 (325)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345678888999999999999976 99999999999876555444 2234456789999999
Q ss_pred CCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEE
Q 020546 213 DANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLS 287 (325)
Q Consensus 213 ~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~ 287 (325)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 76544344444444 899999999999999999999999999876778899999999999876667766553
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=7.2e-27 Score=210.39 Aligned_cols=176 Identities=23% Similarity=0.361 Sum_probs=130.7
Q ss_pred EEEcCCCCCHHHHHHHHHhcCC--------CCCCceeeecCccCCCCCcHHHHHHHHHHhhh---CCCcEEEEcCCcchh
Q 020546 63 RICGDVHGQYQDLLRLFEHGGY--------PPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIHLLRGNHEDA 131 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~~~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~---~p~~v~~LrGNHE~~ 131 (325)
+||||||||+++|.++++..++ .+.+.+||+||+||||+++.+|+.++++|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 35678999999999999999999999999754 457899999999999
Q ss_pred hhhhhhCchH--HHHHHHh-----HHHH---HHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCC
Q 020546 132 KINRIYGFYD--ECKRRFN-----VRLW---KIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDN 201 (325)
Q Consensus 132 ~~~~~~gf~~--e~~~~~~-----~~~~---~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~ 201 (325)
.+...+.+.. ....... ...+ ..+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443321 1111000 1111 34478999999998875 79999999833
Q ss_pred chhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCC
Q 020546 202 GLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAP 273 (325)
Q Consensus 202 ~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~ 273 (325)
+|++.-...... .+ =++..++++++.++.+++|+|||+++.|....+++++++|.+..
T Consensus 140 ------~w~r~y~~~~~~---~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKETSD---KE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhhhh---cc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 343221000000 00 01256888999999999999999999887668999999998844
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=1.1e-26 Score=214.04 Aligned_cols=121 Identities=23% Similarity=0.420 Sum_probs=98.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC---------CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcch
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP---------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~ 130 (325)
++++||||||||++.|.++++.+++. ..+++|||||||||||+|.||+.+++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998874 45789999999999999999999998884 56689999999999
Q ss_pred hhhhhhhCc-------hHHHHHHH-------hHHHHHHHhhhhhcCCeEEEEc-CcEEEecCCCCCC
Q 020546 131 AKINRIYGF-------YDECKRRF-------NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (325)
Q Consensus 131 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~ 182 (325)
+.++...+- ..+....| ...+.+.+.++++++|++..++ ++++|||||+.|.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 887654321 11222223 1346778899999999998774 5799999999885
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=1.8e-24 Score=197.90 Aligned_cols=120 Identities=28% Similarity=0.526 Sum_probs=97.5
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCC----------CCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcc
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPP----------TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE 129 (325)
+|+.||||||||+++|.++|+.+++.+ .+++||||||||||++|.||+.++.+++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999987753 46899999999999999999999998864 357999999999
Q ss_pred hhhhhhhhC--------chHHHHHHH---hHHHHHHHhhhhhcCCeEEEEc-CcEEEecCCCCCC
Q 020546 130 DAKINRIYG--------FYDECKRRF---NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (325)
Q Consensus 130 ~~~~~~~~g--------f~~e~~~~~---~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~ 182 (325)
.+.++...+ +. +....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 988765332 21 222333 2456778899999999998775 4799999998764
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=1.3e-24 Score=197.53 Aligned_cols=115 Identities=24% Similarity=0.363 Sum_probs=91.9
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCC--------CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhh
Q 020546 63 RICGDVHGQYQDLLRLFEHGGYP--------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~~~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~ 134 (325)
+||||||||++.|.++++.+++. +.+++|||||||||||+|.+|+.+++++.. +.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 68999999999999999998775 467899999999999999999999998853 45899999999998875
Q ss_pred hhhCc------------h-----HHHHHHHh--HHHHHHHhhhhhcCCeEEEEcCcEEEecCCCC
Q 020546 135 RIYGF------------Y-----DECKRRFN--VRLWKIFTDCFNCLPVAALINEKILCMHGGLS 180 (325)
Q Consensus 135 ~~~gf------------~-----~e~~~~~~--~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~ 180 (325)
...+. . .+..+.+. .+..+...+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 42221 0 12222222 34567889999999999766 68999999985
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=3.5e-24 Score=200.25 Aligned_cols=219 Identities=18% Similarity=0.316 Sum_probs=142.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
|+++||||||||+++|.++++.+++. ..+.++|+||+|||||+|.||+.++.++ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999998875 4678999999999999999999999876 457999999999998877666
Q ss_pred chH-----HHHHHHhHHHHHHHhhhhhcCCeEEEE-cCcEEEecCCCCCCCCCHHHh---hccCCCCCCCC-Cchhhhcc
Q 020546 139 FYD-----ECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPELENLDQI---RNISRPTDIPD-NGLLCDLL 208 (325)
Q Consensus 139 f~~-----e~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~p~~~~l~~i---~~i~rp~~~~~-~~~~~dlL 208 (325)
... ...........+.+.+|++++|+...+ .+++++||||++|.+...+.+ ++++..+..++ ...+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 431 111111223456688999999998776 568999999999976322211 11222222222 23555566
Q ss_pred ccCCCCCCCCcccCCCCcc-cccChhHHH--HHHHhC-----------------------------CCceEEEeeEeeec
Q 020546 209 WSDPDANIEGWADSDRGVS-CTFGSDVVA--DFLDKN-----------------------------DLDLICRGHQVVED 256 (325)
Q Consensus 209 WsdP~~~~~~~~~~~rg~g-~~fg~~~~~--~fl~~~-----------------------------~~~~iIrgH~~~~~ 256 (325)
|+.|. .|.++-.|.. ..|--.++. +||... .-..||-||.+...
T Consensus 157 ~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~ 232 (275)
T PRK00166 157 GNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALE 232 (275)
T ss_pred CCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccC
Confidence 65563 2333322211 111111111 122221 23479999999877
Q ss_pred CeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCc
Q 020546 257 GYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESL 292 (325)
Q Consensus 257 G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~ 292 (325)
|... ...++.+-|..-+. ++=..+.+++..
T Consensus 233 G~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~~ 262 (275)
T PRK00166 233 GLTT--PPNIIALDTGCVWG----GKLTALRLEDKQ 262 (275)
T ss_pred CccC--CCCeEEeecccccC----CeEEEEEeCCCc
Confidence 8765 45577777766553 333446666543
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=2.5e-24 Score=199.34 Aligned_cols=119 Identities=26% Similarity=0.404 Sum_probs=98.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCch
Q 020546 62 IRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (325)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 140 (325)
++||||||||+++|.++++.+++. +.+.++|+||||||||+|+||+.++.+++ .+++.|+||||.+.+...++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999886 57889999999999999999999998875 5899999999999888766643
Q ss_pred H-----HHHHHHhHHHHHHHhhhhhcCCeEEEEcC-cEEEecCCCCCCCC
Q 020546 141 D-----ECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELE 184 (325)
Q Consensus 141 ~-----e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~ 184 (325)
. .....+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 1 11111222344678899999999988764 79999999999863
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=6.1e-24 Score=197.67 Aligned_cols=121 Identities=24% Similarity=0.412 Sum_probs=101.2
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCC-CCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPP-TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~-~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
|+++||||||||+++|.++|+++++.+ .++++|+||+|||||+|+||+.++.++ ++++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 468999999999999999999999764 678999999999999999999999876 346889999999999988777
Q ss_pred ch-----HHHHHHHhHHHHHHHhhhhhcCCeEEEEc-CcEEEecCCCCCCCC
Q 020546 139 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPELE 184 (325)
Q Consensus 139 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~~~ 184 (325)
+. +.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 23333344566788899999999997654 369999999999873
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.90 E-value=1.9e-23 Score=189.34 Aligned_cols=115 Identities=24% Similarity=0.377 Sum_probs=89.1
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
++++||||||||+++|.++|+.+++. ..++++||||+|||||+|.||+.++.+ .+++.|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999854 25789999999998875322
Q ss_pred chH--------HHHHHH---hHHHHHHHhhhhhcCCeEEEEc---CcEEEecCCCC
Q 020546 139 FYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (325)
Q Consensus 139 f~~--------e~~~~~---~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 180 (325)
-.. +....+ ..+.+....+++++||+...+. +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 110 000011 1234456678999999997653 46999999974
No 28
>PHA02239 putative protein phosphatase
Probab=99.90 E-value=7.5e-23 Score=187.45 Aligned_cols=172 Identities=23% Similarity=0.312 Sum_probs=117.9
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC--CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhh
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIY 137 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~ 137 (325)
|++++||||||+++.|.++++..... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+.+....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987533 46789999999999999999999998875 3466899999999998765321
Q ss_pred Cch--------------HHHHHHHh-------------------------------HHHHHHHhhhhhcCCeEEEEcCcE
Q 020546 138 GFY--------------DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALINEKI 172 (325)
Q Consensus 138 gf~--------------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPlaa~i~~~i 172 (325)
... .+....|+ ...+..+..|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 100 11112221 01234556689999999775 589
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeE
Q 020546 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (325)
Q Consensus 173 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~ 252 (325)
+|||||+.|... +++ ....+++|.+. . .+.. .-+.||.|||
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCC
Confidence 999999988532 221 12368999875 2 1111 1235899999
Q ss_pred eeecCeEEecCCeEEEEeeCC
Q 020546 253 VVEDGYEFFARRRLVTIFSAP 273 (325)
Q Consensus 253 ~~~~G~~~~~~~~~iTvfSa~ 273 (325)
++.++..... ++.|.|-+..
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCCCCccccc-CCEEEeecCc
Confidence 9876543222 3345554443
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=2.1e-22 Score=180.86 Aligned_cols=168 Identities=23% Similarity=0.319 Sum_probs=115.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
++++||||||||+.+|.++++..++. ..+.++|+|||||||+++.|++.++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467888999999999999999988854 36899999999998876544
Q ss_pred c--hHHHHHHH---------hHHHHHHHhhhhhcCCeEEEEc---CcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchh
Q 020546 139 F--YDECKRRF---------NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLL 204 (325)
Q Consensus 139 f--~~e~~~~~---------~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~ 204 (325)
- ..+..... ..++++...+|+++||+...++ .++++||||+++... ...+. + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 2 11111111 1224566788999999998774 368999999865431 11100 0 11122345
Q ss_pred hhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCe
Q 020546 205 CDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGY 258 (325)
Q Consensus 205 ~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 258 (325)
.+++|+++...... +...-+.+.||.||++.+..+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPL 183 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcce
Confidence 67899876421100 000114567999999987544
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.88 E-value=5e-22 Score=185.39 Aligned_cols=195 Identities=19% Similarity=0.302 Sum_probs=128.2
Q ss_pred cEEEEcCCCCCHHHHHHHHHhcCCC------CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCC-cEEEEcCCcchhhh
Q 020546 61 PIRICGDVHGQYQDLLRLFEHGGYP------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPD-KIHLLRGNHEDAKI 133 (325)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~~~~------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~-~v~~LrGNHE~~~~ 133 (325)
++++||||||+++.|.++++.+... ..+.+|||||||||||+|.+|+.+|.+++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999865421 2457999999999999999999999999888876 68999999998765
Q ss_pred hhhhC---------ch------------------------------------------------------HHHHHHHh--
Q 020546 134 NRIYG---------FY------------------------------------------------------DECKRRFN-- 148 (325)
Q Consensus 134 ~~~~g---------f~------------------------------------------------------~e~~~~~~-- 148 (325)
..... |. .+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 00 12222332
Q ss_pred -------HHHHHHHhhhhhcCCeEEEEcCcE-------------EEecCCCCCCCCCHHHhhccC-CCCCCCCCchhhhc
Q 020546 149 -------VRLWKIFTDCFNCLPVAALINEKI-------------LCMHGGLSPELENLDQIRNIS-RPTDIPDNGLLCDL 207 (325)
Q Consensus 149 -------~~~~~~~~~~f~~LPlaa~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-rp~~~~~~~~~~dl 207 (325)
..+-+...+|++.||..... +++ +|||||+-|...--+|...+. +....|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 13345667899999998664 356 999999999876555554422 2222222 388
Q ss_pred cccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEE
Q 020546 208 LWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALL 286 (325)
Q Consensus 208 LWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l 286 (325)
||.+... | ..++.. . ..-.+||.||+. +....+.=|.|-+...|.+. -.||++
T Consensus 238 l~~R~~f----~-~~~~~~---~-----------~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~~--l~aa~v 290 (304)
T cd07421 238 LSGRKNV----W-NIPQEL---A-----------DKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDDR--PIAAIV 290 (304)
T ss_pred cccchhh----h-cCcccc---c-----------CCCeEEEECCCC-----CceecCCEEEEECCCCcCCc--eeEEEE
Confidence 8877642 1 111111 0 012468999992 23334444556676666542 245544
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=1.9e-21 Score=176.38 Aligned_cols=115 Identities=25% Similarity=0.294 Sum_probs=86.1
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
.|++||||||||+++|.++++...+. ..++++|+||||||||+|.||+.++.+ .+++.||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998765 467888999999999999999998743 36899999999988864321
Q ss_pred chH--------HHHHHHh---HHHHHHHhhhhhcCCeEEEEc---CcEEEecCCCC
Q 020546 139 FYD--------ECKRRFN---VRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (325)
Q Consensus 139 f~~--------e~~~~~~---~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 180 (325)
-.. +....+. .........++++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 0001111 122334456899999997663 36899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.48 E-value=3.1e-13 Score=112.10 Aligned_cols=159 Identities=23% Similarity=0.265 Sum_probs=101.7
Q ss_pred CcEEEEcCCCCCHHHH----HHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHH--HHHhhhCCCcEEEEcCCcchhhh
Q 020546 60 APIRICGDVHGQYQDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL--LAYKIRYPDKIHLLRGNHEDAKI 133 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll--~~Lk~~~p~~v~~LrGNHE~~~~ 133 (325)
++|++|||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..++.++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444444456678889999999999887776654 45556678899999999999876
Q ss_pred hhhhCchHHHH----------------------------------HHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCC
Q 020546 134 NRIYGFYDECK----------------------------------RRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGL 179 (325)
Q Consensus 134 ~~~~gf~~e~~----------------------------------~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi 179 (325)
...+....... .............+........-....++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 54322211111 00011111112222222233334455799999988
Q ss_pred CCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEee
Q 020546 180 SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVV 254 (325)
Q Consensus 180 ~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~ 254 (325)
.+....-... .....+.+.+..++++.++++++.||++.
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7632111110 12345678899999999999999999874
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.33 E-value=3.1e-11 Score=102.82 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=62.4
Q ss_pred cEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCch
Q 020546 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (325)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 140 (325)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998654 678999999999998655 1 223469999999998532
Q ss_pred HHHHHHHhHHHHHHHhhhhhcCCeEEEEc---CcEEEecCCC
Q 020546 141 DECKRRFNVRLWKIFTDCFNCLPVAALIN---EKILCMHGGL 179 (325)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi 179 (325)
+..+|....+. .+++++||..
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcc
Confidence 34556544432 2699999964
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.30 E-value=2.8e-11 Score=102.28 Aligned_cols=137 Identities=21% Similarity=0.292 Sum_probs=85.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCc
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf 139 (325)
|+++++||+|++..++.++++.+ ...+.++++||++|+ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 346778899999993 6666666443 79999999997653322110
Q ss_pred hHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCc
Q 020546 140 YDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGW 219 (325)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~ 219 (325)
.. +....... .-..+++++||....
T Consensus 69 ~~----------------~~~~~~~~-~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 EY----------------LLDALRLT-IDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp CS----------------SHSEEEEE-ETTEEEEEESSTSSS--------------------------------------
T ss_pred cc----------------cccceeee-ecCCeEEEECCCCcc--------------------------------------
Confidence 00 11111111 223589999995433
Q ss_pred ccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeC
Q 020546 220 ADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (325)
Q Consensus 220 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa 272 (325)
...+.+.+.+.+...+.++++.||...+.-.+ ..+..+++.-|.
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 01334456677779999999999999754433 233344444443
No 35
>PRK09453 phosphodiesterase; Provisional
Probab=99.26 E-value=1.6e-10 Score=101.57 Aligned_cols=69 Identities=26% Similarity=0.333 Sum_probs=54.9
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCC--------cHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ--------SLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
|++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+.. ....+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~----~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA----YADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh----cCCceEEEccCCcch
Confidence 5899999999999999999988655567889999999999874 3455555533 234799999999975
Q ss_pred h
Q 020546 132 K 132 (325)
Q Consensus 132 ~ 132 (325)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.23 E-value=1.8e-10 Score=98.85 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=48.6
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
|++.|+||+||+..++..+++..... ..+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 57999999999998877776665554 567888999998 45666666443 23599999999983
No 37
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.23 E-value=8.6e-10 Score=100.48 Aligned_cols=71 Identities=8% Similarity=0.135 Sum_probs=58.2
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+++.+++|+||++..+.++++.......+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987654567889999999999976766666666554 3345789999999985
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.13 E-value=4.6e-10 Score=93.84 Aligned_cols=118 Identities=20% Similarity=0.205 Sum_probs=78.6
Q ss_pred cEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcH--HHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--ETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++..+ ....+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~---~~~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSL---PHPHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhC---CCCeEEEEECCCCCcCC-----
Confidence 4789999999987 122345677889999999986432 233333322 11236789999996411
Q ss_pred chHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCC
Q 020546 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEG 218 (325)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~ 218 (325)
.-+.+++++||.+.+.. +..+
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~--------- 86 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVS--------- 86 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------cccc---------
Confidence 11347999999432200 0000
Q ss_pred cccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeE
Q 020546 219 WADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (325)
Q Consensus 219 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 259 (325)
.....|.+.+.+++++.+.++++.||++.+.|++
T Consensus 87 -------~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 87 -------SGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred -------cCcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 0124677889999999999999999999988876
No 39
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.08 E-value=2.3e-10 Score=94.75 Aligned_cols=143 Identities=40% Similarity=0.631 Sum_probs=117.5
Q ss_pred hhhhhCchHHHHHHHhHH-HHHH---HhhhhhcCCeEEEEcC-cEEEecCCCCCCC-CCHHHhhccCCCC--CCCCCchh
Q 020546 133 INRIYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALINE-KILCMHGGLSPEL-ENLDQIRNISRPT--DIPDNGLL 204 (325)
Q Consensus 133 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPlaa~i~~-~il~vHgGi~p~~-~~l~~i~~i~rp~--~~~~~~~~ 204 (325)
+...+++.+++...++.. .|.. ..++|+.+|++++++. .++|.|++++|.+ ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 445567777766666543 4555 9999999999999988 8999999999976 7788888777765 56666777
Q ss_pred hhccccCCCCC-CCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCC
Q 020546 205 CDLLWSDPDAN-IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYG 276 (325)
Q Consensus 205 ~dlLWsdP~~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~ 276 (325)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+.+..++...+.+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 77899998863 678999999998877 788889998888888999999999999888776899999999986
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.02 E-value=1.5e-09 Score=99.46 Aligned_cols=156 Identities=22% Similarity=0.293 Sum_probs=95.1
Q ss_pred cEEEEcCCCCCHHHHH-HHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhh---
Q 020546 61 PIRICGDVHGQYQDLL-RLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRI--- 136 (325)
Q Consensus 61 ~i~ViGDIHG~~~~L~-~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~--- 136 (325)
+|+++|||||++.... +.++.. ..+.++++||+++ .+.+++..+.++ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 333332 3478899999986 356666665443 3468999999998653200
Q ss_pred -----------------hC----------------c---------hHHHHHHHh-HHHHHHHhhhhhcCCeEEEEcCcEE
Q 020546 137 -----------------YG----------------F---------YDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (325)
Q Consensus 137 -----------------~g----------------f---------~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il 173 (325)
++ | ..++++.|+ ....+.+...++.++.+.-....||
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 025555563 2345566667777753333344799
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCC----CceEEE
Q 020546 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKND----LDLICR 249 (325)
Q Consensus 174 ~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----~~~iIr 249 (325)
+.|++++-.. ++.+.+ |. ..|.+. |..+|...+.+.+++.. .++++-
T Consensus 152 iaH~~~~G~g---~~~~~~------------cg----------~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAEDP------------CG----------RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---cccccc------------cc----------cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999976422 111100 00 123221 23567777777666654 799999
Q ss_pred eeEeee
Q 020546 250 GHQVVE 255 (325)
Q Consensus 250 gH~~~~ 255 (325)
||-+-.
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 998864
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.92 E-value=1.2e-08 Score=82.07 Aligned_cols=118 Identities=27% Similarity=0.380 Sum_probs=84.6
Q ss_pred EEEcCCCCCHHHHHHHH--HhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCch
Q 020546 63 RICGDVHGQYQDLLRLF--EHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il--~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 140 (325)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 37899999999988765 33334456778899999999988777655433334456778999999999
Q ss_pred HHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcc
Q 020546 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (325)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~ 220 (325)
++++|.++.+...... +
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~----------- 86 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------P----------- 86 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------c-----------
Confidence 8999997654210000 0
Q ss_pred cCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEE
Q 020546 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (325)
Q Consensus 221 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 260 (325)
........+...+...+.+.+|.||++....+..
T Consensus 87 ------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 87 ------DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred ------cchhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 0001456788889999999999999998765543
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.90 E-value=2e-08 Score=87.43 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=46.8
Q ss_pred EEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCc-HHHHHHHHHHhhhCCCcEEEEcCCcchhhh
Q 020546 62 IRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQS-LETICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (325)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~ 133 (325)
|+++||+||++..+.. ......+.+.+|+.||++++|... .+.+ ..++ ..+..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~---~~l~-~~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEI---NLLL-AIGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHH---HHHH-hcCCCEEEEcCCCCCHHH
Confidence 5789999999999877 222334567888999999998753 2222 2222 335579999999997543
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.86 E-value=9.4e-08 Score=84.11 Aligned_cols=59 Identities=20% Similarity=0.370 Sum_probs=42.1
Q ss_pred cEEEEcCCC-CCHH-----HHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 61 PIRICGDVH-GQYQ-----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 61 ~i~ViGDIH-G~~~-----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 35555543 34578889999987 66766664442 2589999999973
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.84 E-value=8.3e-09 Score=89.01 Aligned_cols=67 Identities=21% Similarity=0.173 Sum_probs=47.4
Q ss_pred EEEEcCCCCCHHHHHHHHH-hcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 62 IRICGDVHGQYQDLLRLFE-HGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 62 i~ViGDIHG~~~~L~~il~-~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+.++||+|++.......+. .......+.++++||+++++.....+. ++ . ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~-~-~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LL-L-ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HH-H-hhcCCccEEEeCCCcceE
Confidence 4689999999887766552 233345567889999999987655443 22 2 223456899999999985
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.75 E-value=8.3e-08 Score=79.99 Aligned_cols=107 Identities=20% Similarity=0.203 Sum_probs=74.8
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHH
Q 020546 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 142 (325)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998888777664 45668899999973 3445555444 2335899999999
Q ss_pred HHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcccC
Q 020546 143 CKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADS 222 (325)
Q Consensus 143 ~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~ 222 (325)
-+++++|+-+.+. .+.+
T Consensus 57 ---------------------------~~Ilv~H~pp~~~-------------------------~~~~----------- 73 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGI-------------------------GDGE----------- 73 (129)
T ss_pred ---------------------------cCEEEECCCCCcC-------------------------cCcc-----------
Confidence 3799999832110 0000
Q ss_pred CCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeE
Q 020546 223 DRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (325)
Q Consensus 223 ~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 259 (325)
+ ...-|.+++.+++++.+.++++.||...+..+.
T Consensus 74 -~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 012356778899999999999999999877665
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.74 E-value=2.8e-07 Score=84.66 Aligned_cols=208 Identities=15% Similarity=0.173 Sum_probs=103.3
Q ss_pred CcEEEEcCCCCCH------HHHHHHHHhcCCCCCCceeeecCccCC--C-----CCcHHHHHHHHHHhhhCCCcEEEEcC
Q 020546 60 APIRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDR--G-----KQSLETICLLLAYKIRYPDKIHLLRG 126 (325)
Q Consensus 60 ~~i~ViGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~Lk~~~p~~v~~LrG 126 (325)
|++++++|+|... ..+.+.++.. ....+.++++||++|. | +...+++.++..++. .+..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 5899999999542 2455555432 1345778899999985 2 234566677666652 3357999999
Q ss_pred CcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcC-cEEEecCCCCCCCC-CHHHhhccCCCC------CC
Q 020546 127 NHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELE-NLDQIRNISRPT------DI 198 (325)
Q Consensus 127 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~-~l~~i~~i~rp~------~~ 198 (325)
|||..... ...+..+. .++.. |....+++ +++++||-.-+.-. ....++++-|.. ..
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 143 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLA 143 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHh
Confidence 99974321 01111111 11211 23223343 69999997654221 111122222210 00
Q ss_pred CCCchhhhccccCCCCCCCCcccCC-CCc-ccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCC
Q 020546 199 PDNGLLCDLLWSDPDANIEGWADSD-RGV-SCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYG 276 (325)
Q Consensus 199 ~~~~~~~dlLWsdP~~~~~~~~~~~-rg~-g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~ 276 (325)
+......++-+ .-....-..+. +.. -....++++.+.+++.+.+++|.||++.+.-.....++.-++-.+-++..
T Consensus 144 ~p~~~~~~ia~---~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw~ 220 (241)
T PRK05340 144 LPLSIRLRIAA---KMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDWH 220 (241)
T ss_pred CCHHHHHHHHH---HHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCCC
Confidence 00000000000 00000000000 111 12234567888899999999999999986443332333112223333332
Q ss_pred CCCCCceeEEEecCC
Q 020546 277 GEFDNAGALLSVNES 291 (325)
Q Consensus 277 ~~~~n~ga~l~i~~~ 291 (325)
..+.++.++++
T Consensus 221 ----~~~~~~~~~~~ 231 (241)
T PRK05340 221 ----EQGSVLKVDAD 231 (241)
T ss_pred ----CCCeEEEEECC
Confidence 24777777775
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.63 E-value=4.8e-07 Score=75.90 Aligned_cols=118 Identities=22% Similarity=0.232 Sum_probs=73.6
Q ss_pred EEEEcCCCCCHH----------HHHHHHHhcCCCCCCceeeecCccCCCCCc-H-HHHHHHHHHhhhCCCcEEEEcCCcc
Q 020546 62 IRICGDVHGQYQ----------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS-L-ETICLLLAYKIRYPDKIHLLRGNHE 129 (325)
Q Consensus 62 i~ViGDIHG~~~----------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-~-evl~ll~~Lk~~~p~~v~~LrGNHE 129 (325)
|+.++|+|=... .|.++++...-...+.++++||+++.|... . +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122244444444567888999999988742 1 2223333332111 37999999999
Q ss_pred hhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccc
Q 020546 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLW 209 (325)
Q Consensus 130 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLW 209 (325)
. ++++|..+.+.-
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~-------------------------- 92 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPP-------------------------- 92 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCC--------------------------
Confidence 8 888998554310
Q ss_pred cCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEE
Q 020546 210 SDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (325)
Q Consensus 210 sdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 260 (325)
..+.. ... +.+.+.+++++.++++++.||+..+..+.+
T Consensus 93 -------~~~~~-----~~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 93 -------GSGRE-----RLL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred -------ccccc-----cCC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 00000 001 567788999999999999999998765543
No 48
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.63 E-value=3.3e-06 Score=76.22 Aligned_cols=204 Identities=21% Similarity=0.218 Sum_probs=118.2
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCcc--CCCCCcHHHHHH--HHHHhhhCCCcEEEEcCCcchhhhh
Q 020546 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYV--DRGKQSLETICL--LLAYKIRYPDKIHLLRGNHEDAKIN 134 (325)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~V--DRG~~s~evl~l--l~~Lk~~~p~~v~~LrGNHE~~~~~ 134 (325)
.+++..+.|+||..+.+.+++........+.+++.||+. ++|+ ..++... +..++ ...-.|+.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~-~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGP-KEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCc-hHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 478999999999999999999988777778888999999 8887 3333333 34443 3456899999999987554
Q ss_pred hhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCC-C-----CHHHhhccCCCC-CCCCCchhhhc
Q 020546 135 RIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL-E-----NLDQIRNISRPT-DIPDNGLLCDL 207 (325)
Q Consensus 135 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~-~-----~l~~i~~i~rp~-~~~~~~~~~dl 207 (325)
.. ....+..+.. -...+++-.+|-=||..|.- . +-++|....+.. ....+ ...=+
T Consensus 81 ~~-------l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~~~Il 142 (226)
T COG2129 81 DV-------LKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-PVNIL 142 (226)
T ss_pred HH-------HHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC-cceEE
Confidence 21 0001111110 11122333344455544321 1 122222111100 00000 00000
Q ss_pred cccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEE
Q 020546 208 LWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLS 287 (325)
Q Consensus 208 LWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~ 287 (325)
+.--|.-. ....++-| -..-|+.+++++.++.+-.+.++||-+...|+..-.+ ||+.+|.-.+ .-..|++.
T Consensus 143 ~~HaPP~g--t~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~ 213 (226)
T COG2129 143 LTHAPPYG--TLLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIE 213 (226)
T ss_pred EecCCCCC--ccccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEE
Confidence 00011100 00001112 1346899999999999999999999998888876544 7888887644 36788888
Q ss_pred ecCC
Q 020546 288 VNES 291 (325)
Q Consensus 288 i~~~ 291 (325)
+++.
T Consensus 214 l~~~ 217 (226)
T COG2129 214 LEKE 217 (226)
T ss_pred ecCc
Confidence 8776
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.59 E-value=1.8e-06 Score=75.61 Aligned_cols=158 Identities=16% Similarity=0.163 Sum_probs=96.1
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCc
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf 139 (325)
+++.|+||.||...+..+..+.......+.+|.+||++...+. ..+ ......+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l---~~~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DAL---EGGLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHh---hcccccceEEEEccCCCcccc-----
Confidence 6899999999999766666665555667888899999986642 111 110246899999999986433
Q ss_pred hHHHHHHHhHHHHHHHhhhhhcCCeEEE--Ec-CcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCC
Q 020546 140 YDECKRRFNVRLWKIFTDCFNCLPVAAL--IN-EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANI 216 (325)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~f~~LPlaa~--i~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~ 216 (325)
..+|-..+ ++ -+++++||.....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 12222222 23 4899999954320
Q ss_pred CCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEE--eeCCCCCCCCCCceeEEEecCC-ce
Q 020546 217 EGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTI--FSAPNYGGEFDNAGALLSVNES-LV 293 (325)
Q Consensus 217 ~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTv--fSa~~y~~~~~n~ga~l~i~~~-~~ 293 (325)
......++.+-+..+.+.+|.|||+.+.-++. ++ ++-| -|.+.+-+ .+..+++.++.+ .+
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~--~~-i~~vNPGS~s~pr~--~~~~sy~il~~~~~~ 157 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV--GG-ILLVNPGSVSGPRG--GNPASYAILDVDNLE 157 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE--CC-EEEEcCCCcCCCCC--CCCcEEEEEEcCCCE
Confidence 12234567777888899999999998643322 22 1111 23333332 244455555543 45
Q ss_pred eEEEEEcC
Q 020546 294 CSFEILKP 301 (325)
Q Consensus 294 ~~~~~~~~ 301 (325)
+....+..
T Consensus 158 ~~~~~~~~ 165 (172)
T COG0622 158 VEVLFLER 165 (172)
T ss_pred EEEEEeec
Confidence 55555543
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.54 E-value=7.4e-07 Score=81.63 Aligned_cols=68 Identities=22% Similarity=0.137 Sum_probs=47.9
Q ss_pred cEEEEcCCCCCH------HHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 61 PIRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 61 ~i~ViGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
++.+++|+|.++ ..+.++++...-...+.+|+.||++++.+.+.+.+..+.+ ..+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~---~~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQE---LKGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHH---hcCCcEEEECCCCCCC
Confidence 588999999763 2355666655444567788999999987655555544433 2445799999999964
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.54 E-value=1.2e-06 Score=80.07 Aligned_cols=205 Identities=15% Similarity=0.134 Sum_probs=99.8
Q ss_pred EEEEcCCCCCH------HHHHHHHHhcCCCCCCceeeecCccCCC-----CC--cHHHHHHHHHHhhhCCCcEEEEcCCc
Q 020546 62 IRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRG-----KQ--SLETICLLLAYKIRYPDKIHLLRGNH 128 (325)
Q Consensus 62 i~ViGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG-----~~--s~evl~ll~~Lk~~~p~~v~~LrGNH 128 (325)
+++++|+|... ..+.+.+.... ...+.++++||++|.. +. ..++...+..|+. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 23444444322 1457788999999952 11 1344555555543 356899999999
Q ss_pred chhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEE-cCcEEEecCCCCCCC-CCHHHhhccCC-CC------CCC
Q 020546 129 EDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPEL-ENLDQIRNISR-PT------DIP 199 (325)
Q Consensus 129 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~p~~-~~l~~i~~i~r-p~------~~~ 199 (325)
|...-. ...+..+ ..++.. |....+ +.+++++||-.-..- ......+++-| |. ..|
T Consensus 79 D~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 0000001 112222 122222 357999999643210 11111222211 10 000
Q ss_pred --CCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCC
Q 020546 200 --DNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGG 277 (325)
Q Consensus 200 --~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~ 277 (325)
....+...+|+..... . ......-....++.++++++..+.+++|.||++.+.-.....++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0111222233221100 0 00000112235677888899999999999999986544433333223444444442
Q ss_pred CCCCceeEEEecCC
Q 020546 278 EFDNAGALLSVNES 291 (325)
Q Consensus 278 ~~~n~ga~l~i~~~ 291 (325)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23555666553
No 52
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.46 E-value=7.5e-06 Score=73.96 Aligned_cols=193 Identities=18% Similarity=0.179 Sum_probs=99.1
Q ss_pred cEEEEcCCCCCH----HHH----HHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhh--CCCcEEEEcCCcch
Q 020546 61 PIRICGDVHGQY----QDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR--YPDKIHLLRGNHED 130 (325)
Q Consensus 61 ~i~ViGDIHG~~----~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~--~p~~v~~LrGNHE~ 130 (325)
+++++||+|--. ..+ ..+.+...-...+.+|++||++|.+....+--.+...++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 588999999522 223 33344433334567889999999998433222222222222 34468999999994
Q ss_pred hhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhcccc
Q 020546 131 AKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWS 210 (325)
Q Consensus 131 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWs 210 (325)
. +...+.. ..+.++.+.+.++..|- ..-++++|--+.+.-. |.
T Consensus 82 ~-~~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------~~ 124 (214)
T cd07399 82 V-LALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------RP 124 (214)
T ss_pred h-hhCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------cC
Confidence 3 2211211 12223334444443331 1247788874322100 10
Q ss_pred CCCCCCCCcccCCCCcccccChhHHHHHHHhC-CCceEEEeeEeeecCeEEe-----cCCeEEEEeeCCCCCCCCCCce-
Q 020546 211 DPDANIEGWADSDRGVSCTFGSDVVADFLDKN-DLDLICRGHQVVEDGYEFF-----ARRRLVTIFSAPNYGGEFDNAG- 283 (325)
Q Consensus 211 dP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~-----~~~~~iTvfSa~~y~~~~~n~g- 283 (325)
+. ...| .....+.+.+.+.++++ ++++++.||.+.. +.... .++.+..+.+....... ...|
T Consensus 125 ~~---~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~-~g~~~ 193 (214)
T cd07399 125 DS---IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPN-GGNGF 193 (214)
T ss_pred cc---cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCC-CCcce
Confidence 00 0001 01123455678889888 7999999998863 33322 13445555554322211 1122
Q ss_pred -eEEEecCC-ceeEEEEEcC
Q 020546 284 -ALLSVNES-LVCSFEILKP 301 (325)
Q Consensus 284 -a~l~i~~~-~~~~~~~~~~ 301 (325)
.++.++++ ..+.+..|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 34666666 4677777765
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.35 E-value=1.7e-05 Score=70.46 Aligned_cols=70 Identities=13% Similarity=0.006 Sum_probs=44.6
Q ss_pred CcEEEEcCCCCCHH------------HHHHHHHhcCCCCCCceeeecCccCCCCCc---HHHHHHHHHHhhhCCCcEEEE
Q 020546 60 APIRICGDVHGQYQ------------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS---LETICLLLAYKIRYPDKIHLL 124 (325)
Q Consensus 60 ~~i~ViGDIHG~~~------------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~Lk~~~p~~v~~L 124 (325)
.++++++|+|-... .+..+.+.......+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996222 122222222233457789999999977653 455555544333345678999
Q ss_pred cCCcc
Q 020546 125 RGNHE 129 (325)
Q Consensus 125 rGNHE 129 (325)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.32 E-value=8.1e-06 Score=76.09 Aligned_cols=73 Identities=22% Similarity=0.241 Sum_probs=50.3
Q ss_pred cEEEEcCCC--C-----------CHHHHHHHHHhcCCCCCCceeeecCccCCCCC-cHHHHHHHHHHhhhCCCcEEEEcC
Q 020546 61 PIRICGDVH--G-----------QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ-SLETICLLLAYKIRYPDKIHLLRG 126 (325)
Q Consensus 61 ~i~ViGDIH--G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~-s~evl~ll~~Lk~~~p~~v~~LrG 126 (325)
++++++|+| . ....+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24566777776654456778899999998873 223344444433334457999999
Q ss_pred Ccchhhh
Q 020546 127 NHEDAKI 133 (325)
Q Consensus 127 NHE~~~~ 133 (325)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 55
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.27 E-value=1.6e-05 Score=72.18 Aligned_cols=69 Identities=26% Similarity=0.284 Sum_probs=46.7
Q ss_pred cEEEEcCCCCC------------HHHHHHHHHhcCCC--CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcC
Q 020546 61 PIRICGDVHGQ------------YQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRG 126 (325)
Q Consensus 61 ~i~ViGDIHG~------------~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrG 126 (325)
|+++++|+|=. ...|.++++.+.-. ..+.+|++||+++.|.. +....+.+.....+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 58899999944 34567777765443 55678899999998752 2223333332233567999999
Q ss_pred Ccchh
Q 020546 127 NHEDA 131 (325)
Q Consensus 127 NHE~~ 131 (325)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 56
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.21 E-value=7.3e-05 Score=69.91 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=48.2
Q ss_pred CcEEEEcCCC-C-----------CHHHHHHHHHhcCC--CCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEc
Q 020546 60 APIRICGDVH-G-----------QYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (325)
Q Consensus 60 ~~i~ViGDIH-G-----------~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~Lr 125 (325)
.+++.|+|+| . ....|.++++.+.. +..+.+|+.||+++.|. .+-+..+.+.-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 5799999999 1 24667777776532 23567889999999874 3333333333334466799999
Q ss_pred CCcchh
Q 020546 126 GNHEDA 131 (325)
Q Consensus 126 GNHE~~ 131 (325)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999974
No 57
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.18 E-value=0.00012 Score=67.74 Aligned_cols=71 Identities=13% Similarity=0.004 Sum_probs=43.7
Q ss_pred cEEEEcCCCCCH----------------HHHHHHHHhcCC--CCCCceeeecCccCCCCCcH---HHHHHHHH-Hhhh-C
Q 020546 61 PIRICGDVHGQY----------------QDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSL---ETICLLLA-YKIR-Y 117 (325)
Q Consensus 61 ~i~ViGDIHG~~----------------~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~---evl~ll~~-Lk~~-~ 117 (325)
+++++||+|-.. ..|.++++.+.- +..+.++++||+++.|...- +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578889998663 234556655432 24466789999999887542 11222222 2211 2
Q ss_pred CCcEEEEcCCcchh
Q 020546 118 PDKIHLLRGNHEDA 131 (325)
Q Consensus 118 p~~v~~LrGNHE~~ 131 (325)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34799999999974
No 58
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.17 E-value=4.3e-06 Score=78.28 Aligned_cols=70 Identities=19% Similarity=0.053 Sum_probs=50.9
Q ss_pred CcEEEEcCCCCC----HHHHHHHHHhcCCCCCCceeeecCccCCC--CCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQ----YQDLLRLFEHGGYPPTANYLFLGDYVDRG--KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~VDRG--~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
.++++++|+|.. ...+.++++...-...+.+++.||++|++ ....++...+..|+.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55677777765555667888999999954 2233455556666543 4599999999974
No 59
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.09 E-value=5.8e-06 Score=74.21 Aligned_cols=71 Identities=25% Similarity=0.194 Sum_probs=51.6
Q ss_pred CcEEEEcCCCCCHH----HHHHHHHhcCCCCCCceeeecCccCCCCCcH-HHHHHHHHHhhhCCCcEEEEcCCcchhh
Q 020546 60 APIRICGDVHGQYQ----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (325)
Q Consensus 60 ~~i~ViGDIHG~~~----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll~~Lk~~~p~~v~~LrGNHE~~~ 132 (325)
.++++++|+|.... .+.++++...-...+.+++.||++|.+.... ++..++..+ ..+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 57999999998743 6677776655445577889999999987665 444444333 23457999999999853
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.08 E-value=5.1e-05 Score=69.36 Aligned_cols=67 Identities=25% Similarity=0.232 Sum_probs=40.3
Q ss_pred EEEEcCCCCC---------H-----HHHHHHHHhcC--CCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEc
Q 020546 62 IRICGDVHGQ---------Y-----QDLLRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (325)
Q Consensus 62 i~ViGDIHG~---------~-----~~L~~il~~~~--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~Lr 125 (325)
|++++|+|-. + +-+.++.+... .++.+.+|+.||++++++.. +....+..++. .|..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 1 22222332211 23567788999999887633 33233323332 244589999
Q ss_pred CCcch
Q 020546 126 GNHED 130 (325)
Q Consensus 126 GNHE~ 130 (325)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 61
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.05 E-value=4.1e-05 Score=77.84 Aligned_cols=112 Identities=20% Similarity=0.240 Sum_probs=60.1
Q ss_pred cCcEEEEcCCC-CCH----HHHHHHHHhcC-C--------CCCCceeeecCccCC-CCCc---------------HHHHH
Q 020546 59 EAPIRICGDVH-GQY----QDLLRLFEHGG-Y--------PPTANYLFLGDYVDR-GKQS---------------LETIC 108 (325)
Q Consensus 59 ~~~i~ViGDIH-G~~----~~L~~il~~~~-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~ 108 (325)
+..+++|+|+| |.- ..+..+++... . ...+.+|++||++|. |.++ -++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35699999999 652 23344433322 1 223678899999994 3211 12333
Q ss_pred HHHHHhhhCCCcEEEEcCCcchhhhhhh-hCchHHHHHHHhHHHHH-HHhhhhhcCCeEEEEcC-cEEEecCC
Q 020546 109 LLLAYKIRYPDKIHLLRGNHEDAKINRI-YGFYDECKRRFNVRLWK-IFTDCFNCLPVAALINE-KILCMHGG 178 (325)
Q Consensus 109 ll~~Lk~~~p~~v~~LrGNHE~~~~~~~-~gf~~e~~~~~~~~~~~-~~~~~f~~LPlaa~i~~-~il~vHgG 178 (325)
++..+. ..-.|++++||||....... -.+..... ..+. .-..++.. |....+++ +++++||-
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~-----~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIR-----SLFPEHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHH-----HhcCcCCeEEecC-CeEEEECCEEEEEECCC
Confidence 443332 23479999999997643221 11222111 1111 12334444 65544454 78999994
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.86 E-value=3.7e-05 Score=71.30 Aligned_cols=73 Identities=23% Similarity=0.232 Sum_probs=49.5
Q ss_pred CcEEEEcCCCC-C-----------HHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHH----HHHHHHhhhCCCcEEE
Q 020546 60 APIRICGDVHG-Q-----------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETI----CLLLAYKIRYPDKIHL 123 (325)
Q Consensus 60 ~~i~ViGDIHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~~ 123 (325)
++++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+.. .++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555555544445677899999999986665443 3344444333357999
Q ss_pred EcCCcchhh
Q 020546 124 LRGNHEDAK 132 (325)
Q Consensus 124 LrGNHE~~~ 132 (325)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999853
No 63
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.80 E-value=3.6e-06 Score=83.05 Aligned_cols=242 Identities=14% Similarity=-0.035 Sum_probs=163.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC-c---EEEEcCCCCCHHHHHHHHHhcCCCCC-CceeeecCccCCCCCcHHH
Q 020546 32 QLSESEIRQLCVNARQIFLSQPNLVEVEA-P---IRICGDVHGQYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLET 106 (325)
Q Consensus 32 ~l~~~~~~~l~~~~~~~l~~ep~~l~~~~-~---i~ViGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~ev 106 (325)
.|...++..+++-+.+++..+|+...... | .+.++|.||.+.|+.++++.- |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 46678899999999999999998888743 3 789999999999999998753 333 3499999999999999999
Q ss_pred HHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhH---HHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCC-
Q 020546 107 ICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV---RLWKIFTDCFNCLPVAALINEKILCMHGGLSPE- 182 (325)
Q Consensus 107 l~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~- 182 (325)
+..+...+...|+...+.|++||+..+-..++|..+....++. .++..+...+.. |+++...+.+ +-|.-++-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~-le~~kvt~e~ 169 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPV-LEDHKVTLEF 169 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcc-cccchhhHHH
Confidence 9999999999999999999999999988888887665544421 122222221111 1443433222 222111100
Q ss_pred -------------C------CCHHHhhccCCCCCCC-CCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhC
Q 020546 183 -------------L------ENLDQIRNISRPTDIP-DNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (325)
Q Consensus 183 -------------~------~~l~~i~~i~rp~~~~-~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~ 242 (325)
+ .-+++...+.+-+..+ +...-.+..|+++......+.+..++.+...++.....|+.+.
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 0 0011111111111100 1114467889998866556667778888888899999999999
Q ss_pred CCceEEEeeEee------------ecCeEEecC---CeEEEEeeCCCCCC
Q 020546 243 DLDLICRGHQVV------------EDGYEFFAR---RRLVTIFSAPNYGG 277 (325)
Q Consensus 243 ~~~~iIrgH~~~------------~~G~~~~~~---~~~iTvfSa~~y~~ 277 (325)
+..-+.+.|.-+ ..+|...++ +.++++|+.+.++.
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 988888888653 223333332 34788999988873
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.76 E-value=0.00024 Score=61.08 Aligned_cols=47 Identities=28% Similarity=0.305 Sum_probs=30.1
Q ss_pred CCCceeeecCccCCCCCcH-HHH-HHHHHHhhh---C-CCcEEEEcCCcchhh
Q 020546 86 PTANYLFLGDYVDRGKQSL-ETI-CLLLAYKIR---Y-PDKIHLLRGNHEDAK 132 (325)
Q Consensus 86 ~~~~~vfLGD~VDRG~~s~-evl-~ll~~Lk~~---~-p~~v~~LrGNHE~~~ 132 (325)
..+.+|++||++|.+.... +.. .++..++.. . +..++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4578899999999876432 222 223333222 1 347999999999743
No 65
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.75 E-value=6.2e-05 Score=72.81 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=49.3
Q ss_pred CcEEEEcCCC-C-----------CHHHHHHHHHhcCCCCCCceeeecCccCCC-CCcHHHHHHHHH--Hh--hhCCCcEE
Q 020546 60 APIRICGDVH-G-----------QYQDLLRLFEHGGYPPTANYLFLGDYVDRG-KQSLETICLLLA--YK--IRYPDKIH 122 (325)
Q Consensus 60 ~~i~ViGDIH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--Lk--~~~p~~v~ 122 (325)
|+++.+||+| | ....|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5889999999 4 234556666555555567889999999985 445555544433 21 12355799
Q ss_pred EEcCCcchh
Q 020546 123 LLRGNHEDA 131 (325)
Q Consensus 123 ~LrGNHE~~ 131 (325)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 66
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.64 E-value=0.00026 Score=64.61 Aligned_cols=194 Identities=18% Similarity=0.254 Sum_probs=101.0
Q ss_pred EEcCCCCC------HHHHHHHHHhcCCCCCCceeeecCccCC--CCC-----cHHHHHHHHHHhhhCCCcEEEEcCCcch
Q 020546 64 ICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDR--GKQ-----SLETICLLLAYKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 64 ViGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDR--G~~-----s~evl~ll~~Lk~~~p~~v~~LrGNHE~ 130 (325)
.|+|+|=. .+.|.+.++... +..+.+.+|||++|- |.. --+|...|..+ .+...+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 58899844 344556665533 245678889999962 322 13444444443 2456799999999995
Q ss_pred hhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEE---cCcEEEecCCCCCCCCCHHHhhcc---------------
Q 020546 131 AKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---NEKILCMHGGLSPELENLDQIRNI--------------- 192 (325)
Q Consensus 131 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~p~~~~l~~i~~i--------------- 192 (325)
. +...+ + .-..-+.-+|-..++ +.+++.+||-. +.+.+.--.+
T Consensus 80 l-l~~~f----------~-----~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~---f~t~~~~y~~~r~~~~~~~~~~lfl 140 (237)
T COG2908 80 L-LGKRF----------A-----QEAGGMTLLPDPIVLDLYGKRILLAHGDT---FCTDDRAYQWFRYKVHWAWLQLLFL 140 (237)
T ss_pred H-HHHHH----------H-----hhcCceEEcCcceeeeecCcEEEEEeCCc---ccchHHHHHHHHHHcccHHHHHHHH
Confidence 3 32211 1 111112334444333 46899999954 2222211110
Q ss_pred CCCCCCCCCchhhhccccCCCCCCCCcccCCCCccc---ccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEE
Q 020546 193 SRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSC---TFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTI 269 (325)
Q Consensus 193 ~rp~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~---~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTv 269 (325)
..|+. -..-+..-+|+.. .|...+..... ...++++.+-+++++++.+|.||++.+..-.......|.
T Consensus 141 nl~l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~-- 211 (237)
T COG2908 141 NLPLR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN-- 211 (237)
T ss_pred HhHHH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe--
Confidence 01110 0001122244433 22222111111 235677888899999999999999987554432211111
Q ss_pred eeCCCCCCCCCCceeEEEecCCce
Q 020546 270 FSAPNYGGEFDNAGALLSVNESLV 293 (325)
Q Consensus 270 fSa~~y~~~~~n~ga~l~i~~~~~ 293 (325)
. |.-...++++.++++..
T Consensus 212 --l----GdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 --L----GDWVSEGSILEVDDGGL 229 (237)
T ss_pred --c----CcchhcceEEEEecCcE
Confidence 1 11225678888877653
No 67
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.64 E-value=0.00011 Score=68.67 Aligned_cols=70 Identities=20% Similarity=0.338 Sum_probs=45.8
Q ss_pred EEEEcCCCCCHHHHHHHHHh---cCCCCCCceeeecCccCCCCC-cHHHHH------HHH---HH---hhhCCCcEEEEc
Q 020546 62 IRICGDVHGQYQDLLRLFEH---GGYPPTANYLFLGDYVDRGKQ-SLETIC------LLL---AY---KIRYPDKIHLLR 125 (325)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~---~~~~~~~~~vfLGD~VDRG~~-s~evl~------ll~---~L---k~~~p~~v~~Lr 125 (325)
|+|+||+||+++.+.+.++. ....+.+.+|++||+-..+.. ..+.+. -+. ++ ....|-.++++-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999999775443 223466788899999755432 232221 111 11 223566789999
Q ss_pred CCcchh
Q 020546 126 GNHEDA 131 (325)
Q Consensus 126 GNHE~~ 131 (325)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 68
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.64 E-value=0.00033 Score=64.99 Aligned_cols=71 Identities=20% Similarity=0.036 Sum_probs=42.2
Q ss_pred EEEEcCCCCCHH------HH-HHHHHhcCCCCCCceeeecCccCCCCCc-------HHHH-HHHHHHhh---hCCCcEEE
Q 020546 62 IRICGDVHGQYQ------DL-LRLFEHGGYPPTANYLFLGDYVDRGKQS-------LETI-CLLLAYKI---RYPDKIHL 123 (325)
Q Consensus 62 i~ViGDIHG~~~------~L-~~il~~~~~~~~~~~vfLGD~VDRG~~s-------~evl-~ll~~Lk~---~~p~~v~~ 123 (325)
++.++|+|-... .. ..+++.+.....+.+|++||++|++... .+-. .++..++. ..+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567899995321 12 2334444444566888999999986521 1111 22222222 23568999
Q ss_pred EcCCcchhh
Q 020546 124 LRGNHEDAK 132 (325)
Q Consensus 124 LrGNHE~~~ 132 (325)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 69
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.61 E-value=0.00016 Score=64.51 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=21.9
Q ss_pred ChhHHHHHHHhCCCceEEEeeEeeecCe
Q 020546 231 GSDVVADFLDKNDLDLICRGHQVVEDGY 258 (325)
Q Consensus 231 g~~~~~~fl~~~~~~~iIrgH~~~~~G~ 258 (325)
.+..+.+.++..+.+.+|.||++.+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 3455777788999999999999976443
No 70
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.61 E-value=0.00018 Score=62.56 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=34.7
Q ss_pred HHHHHHhcCCCCCCceeeecCccCCCCCcH-HHHHHH-HHHhhhCCCcEEEEcCCcchhh
Q 020546 75 LLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLL-LAYKIRYPDKIHLLRGNHEDAK 132 (325)
Q Consensus 75 L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~Lk~~~p~~v~~LrGNHE~~~ 132 (325)
+.++.+.....+.+.+|++||++|....+. +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444445688999999998654332 211111 1112234568999999999853
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.56 E-value=0.00016 Score=64.57 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=49.9
Q ss_pred cEEEEcCCC-CCH--------------HHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhC---CCcEE
Q 020546 61 PIRICGDVH-GQY--------------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRY---PDKIH 122 (325)
Q Consensus 61 ~i~ViGDIH-G~~--------------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~---p~~v~ 122 (325)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 322 236666666554556778899999998876655444443332222 55799
Q ss_pred EEcCCcchhhhh
Q 020546 123 LLRGNHEDAKIN 134 (325)
Q Consensus 123 ~LrGNHE~~~~~ 134 (325)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999976543
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.49 E-value=0.00023 Score=70.61 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=47.2
Q ss_pred CcEEEEcCCC-CC-H------HH----HHHHHHhcCCCCCCceeeecCccCCCCCcHHHH----HHHHHHhhhCCCcEEE
Q 020546 60 APIRICGDVH-GQ-Y------QD----LLRLFEHGGYPPTANYLFLGDYVDRGKQSLETI----CLLLAYKIRYPDKIHL 123 (325)
Q Consensus 60 ~~i~ViGDIH-G~-~------~~----L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~~ 123 (325)
++++.++|+| |. + .+ |.++++.+.-...+.+|+.||++|++..+.+.. .++..|+. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 32 1 11 334444444455678889999999986554432 23334442 3457999
Q ss_pred EcCCcchhh
Q 020546 124 LRGNHEDAK 132 (325)
Q Consensus 124 LrGNHE~~~ 132 (325)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999754
No 73
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.46 E-value=0.0015 Score=57.06 Aligned_cols=49 Identities=24% Similarity=0.268 Sum_probs=31.5
Q ss_pred CCCCCceeeecCccCCCCCcH--HHHHHHHHHhhhC--------CCcEEEEcCCcchhh
Q 020546 84 YPPTANYLFLGDYVDRGKQSL--ETICLLLAYKIRY--------PDKIHLLRGNHEDAK 132 (325)
Q Consensus 84 ~~~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~--------p~~v~~LrGNHE~~~ 132 (325)
....+.+|++||++|.+.... +....+..++..+ +..++.+.||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 345578899999999887432 2222332222211 457999999999864
No 74
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.45 E-value=0.001 Score=62.25 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=41.7
Q ss_pred CcEEEEcCCCC----CHHHHHHHHHhcCCCCCCceeeecCccCCCCCc----HH-HHHHHHHHhhhCCCcEEEEcCCcch
Q 020546 60 APIRICGDVHG----QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQS----LE-TICLLLAYKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 60 ~~i~ViGDIHG----~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s----~e-vl~ll~~Lk~~~p~~v~~LrGNHE~ 130 (325)
-+++|+||.|. +...+.++.+. ....+-+|++||+++.+... -+ .+..+..+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 47899999995 33444444433 23456688999999644322 11 122222222 23468999999998
Q ss_pred hhh
Q 020546 131 AKI 133 (325)
Q Consensus 131 ~~~ 133 (325)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 644
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.44 E-value=0.0004 Score=63.43 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=43.9
Q ss_pred CcEEEEcCCC-CCHHH----------------HHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEE
Q 020546 60 APIRICGDVH-GQYQD----------------LLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIH 122 (325)
Q Consensus 60 ~~i~ViGDIH-G~~~~----------------L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~ 122 (325)
.++.||+|+| |--.. |.++.+.......+.+|++||+++..... .....+.++.......++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~~~~~~v~ 93 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKG-LEWRFIREFIEVTFRDLI 93 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHHhcCCcEE
Confidence 6789999999 54332 22233333333457899999999765543 222222222112234899
Q ss_pred EEcCCcchhh
Q 020546 123 LLRGNHEDAK 132 (325)
Q Consensus 123 ~LrGNHE~~~ 132 (325)
+++||||...
T Consensus 94 ~V~GNHD~~~ 103 (225)
T TIGR00024 94 LIRGNHDALI 103 (225)
T ss_pred EECCCCCCcc
Confidence 9999999754
No 76
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.44 E-value=0.0022 Score=65.70 Aligned_cols=71 Identities=23% Similarity=0.311 Sum_probs=48.6
Q ss_pred ChhHHHHHHHhCCCc----eEEEeeEeee--cCeEE-ecCCeEEEE---eeCCCCCCCCCCceeEEEecCCceeEEEEEc
Q 020546 231 GSDVVADFLDKNDLD----LICRGHQVVE--DGYEF-FARRRLVTI---FSAPNYGGEFDNAGALLSVNESLVCSFEILK 300 (325)
Q Consensus 231 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~-~~~~~~iTv---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 300 (325)
.++..+..|+..|++ .||-||+||. +|-.. -++||++.| ||.+ |.... ..|.+-.+.+.-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~T-GIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTT-GIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hcccc-CccceEEEecCCcceeccCC
Confidence 355677889999998 9999999986 67654 478999988 5655 44432 34555556555555555555
Q ss_pred CCC
Q 020546 301 PAD 303 (325)
Q Consensus 301 ~~~ 303 (325)
|-.
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 543
No 77
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.35 E-value=0.00057 Score=67.69 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=57.0
Q ss_pred CcEEEEcCCCCC------------HHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhh-----------
Q 020546 60 APIRICGDVHGQ------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR----------- 116 (325)
Q Consensus 60 ~~i~ViGDIHG~------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~----------- 116 (325)
++|++++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 689999999942 567788888876666788889999999999998887665554322
Q ss_pred -------------------------CCCcEEEEcCCcchhh
Q 020546 117 -------------------------YPDKIHLLRGNHEDAK 132 (325)
Q Consensus 117 -------------------------~p~~v~~LrGNHE~~~ 132 (325)
..-.|+++-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1337999999999964
No 78
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.33 E-value=0.00041 Score=60.14 Aligned_cols=67 Identities=28% Similarity=0.407 Sum_probs=42.9
Q ss_pred EEEEcCCCCCHHHH---------------HHHHHhcC--CCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEE
Q 020546 62 IRICGDVHGQYQDL---------------LRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (325)
Q Consensus 62 i~ViGDIHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~L 124 (325)
+++|+|+|=..... .++++... ..+.+.++++||++++|..+.. +.++. ..+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~----~~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLS----RLNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHH----hCCCCeEEE
Confidence 36889998554432 22232211 2346789999999999986543 33332 234579999
Q ss_pred cCCcchhhh
Q 020546 125 RGNHEDAKI 133 (325)
Q Consensus 125 rGNHE~~~~ 133 (325)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 79
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.32 E-value=0.0016 Score=55.83 Aligned_cols=119 Identities=21% Similarity=0.272 Sum_probs=79.5
Q ss_pred EEEcCCCCCHHHHHHHHHhcCC--CCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCch
Q 020546 63 RICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 140 (325)
.|+||+||+++.+.+-++...- .+-+-++++||+..-...+-+ +.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 3899999999999877765321 244678899999976555433 33333334567888999999998
Q ss_pred HHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCCCCCcc
Q 020546 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (325)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~~~~~~ 220 (325)
.-+||++|.=+.. +...+++ ..+
T Consensus 69 ----------------------------~~DILlTh~wP~g-i~~~~~~-------------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPKG-ISKLSKV-------------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCchh-hhhhCCC-------------------ccc---------
Confidence 3478999983211 1000100 000
Q ss_pred cCCCCcccccChhHHHHHHHhCCCceEEEeeEee
Q 020546 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVV 254 (325)
Q Consensus 221 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~ 254 (325)
..+..-|...+++++++..-++.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012345889999999999999999999764
No 80
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.28 E-value=0.00098 Score=61.55 Aligned_cols=74 Identities=20% Similarity=0.198 Sum_probs=53.6
Q ss_pred CcEEEEcCCCCC------HHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhh--hCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKI--RYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~--~~p~~v~~LrGNHE~~ 131 (325)
++++.|+|+|-. ...+.++++.....+.+.+|+.||+.+.|. .+-+..+..+-. ..+..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999976 345566667777666688999999999963 333333333333 6678899999999998
Q ss_pred hhhh
Q 020546 132 KINR 135 (325)
Q Consensus 132 ~~~~ 135 (325)
....
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 7664
No 81
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.26 E-value=0.0012 Score=60.11 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=45.5
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcH-------------------------HHHHHHHHHh
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-------------------------ETICLLLAYK 114 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-------------------------evl~ll~~Lk 114 (325)
.+|..++|.||+++.+.++...+.-...|-+||+||++-....+- |.++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 469999999999999999988766666788999999986543333 2333333333
Q ss_pred hhCCCcEEEEcCCcchhh
Q 020546 115 IRYPDKIHLLRGNHEDAK 132 (325)
Q Consensus 115 ~~~p~~v~~LrGNHE~~~ 132 (325)
-..+-.+++++||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 456778999999999854
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.95 E-value=0.0059 Score=57.74 Aligned_cols=72 Identities=21% Similarity=0.179 Sum_probs=48.0
Q ss_pred cEEEEcCCCCCHHH--HHHHHHhcCCCCCCceeeecCccCC-CCCc-HHHHHHHHHHhhhCCCcEEEEcCCcchhhhh
Q 020546 61 PIRICGDVHGQYQD--LLRLFEHGGYPPTANYLFLGDYVDR-GKQS-LETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (325)
Q Consensus 61 ~i~ViGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~VDR-G~~s-~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~ 134 (325)
+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+.+ ..+...+..| ..|-.++.+-||||...-.
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccccc
Confidence 59999999987655 2223333222333778899999996 4444 4445555555 4566899999999876433
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.85 E-value=0.027 Score=52.47 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=25.0
Q ss_pred cChhHHHHHHHhCCCceEEEeeEeeecCeEEec
Q 020546 230 FGSDVVADFLDKNDLDLICRGHQVVEDGYEFFA 262 (325)
Q Consensus 230 fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~ 262 (325)
-.++.++..|++.+-.+|+-||.+ ++++..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 367889999999999999999987 4555444
No 84
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.72 E-value=0.027 Score=56.30 Aligned_cols=208 Identities=17% Similarity=0.218 Sum_probs=106.6
Q ss_pred cEEEEcCCCC-CHH----HHHHHHHhcC----CCCCCcee-eecCccCCC------------CCcHHHHHHHHHHhhhCC
Q 020546 61 PIRICGDVHG-QYQ----DLLRLFEHGG----YPPTANYL-FLGDYVDRG------------KQSLETICLLLAYKIRYP 118 (325)
Q Consensus 61 ~i~ViGDIHG-~~~----~L~~il~~~~----~~~~~~~v-fLGD~VDRG------------~~s~evl~ll~~Lk~~~p 118 (325)
.++.++|+|= .-. .+...++-++ ..+..+|+ .-||.||.. .+..|-+..+..+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4899999995 222 2223333222 22334566 688999942 122333444444444445
Q ss_pred C--cEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcC-cEEEecCCCCCCCCCHHHhhccCCC
Q 020546 119 D--KIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRNISRP 195 (325)
Q Consensus 119 ~--~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~~l~~i~~i~rp 195 (325)
. .|++.+||||..-....--...+. ...++...+-.|-.=|...-+++ ++|..|| .++++|...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 5 688999999986543221122221 12334444344455566655655 6888898 467776544333
Q ss_pred CCC--CCCchhhhccccCCCCCCCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCC
Q 020546 196 TDI--PDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAP 273 (325)
Q Consensus 196 ~~~--~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~ 273 (325)
.+. +...+-+-|.|.-=.+...+-.+ -+-|.+| -|.=.---++++.||++. .|+..+.+.+++..+|-+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~kD---~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETKD---YLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCcC---ceeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 222 11122223334321111100000 0001100 011111256789999998 688888888888888888
Q ss_pred CCCCCCCCceeEEEecCC
Q 020546 274 NYGGEFDNAGALLSVNES 291 (325)
Q Consensus 274 ~y~~~~~n~ga~l~i~~~ 291 (325)
.+.. .+-++-++..
T Consensus 448 ~qTe----fqk~vni~p~ 461 (481)
T COG1311 448 EQTE----FQKMVNINPT 461 (481)
T ss_pred chhc----cceEEEecCc
Confidence 7654 3445555443
No 85
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.67 E-value=0.0055 Score=56.20 Aligned_cols=70 Identities=21% Similarity=0.259 Sum_probs=38.4
Q ss_pred EEEcCCC--CCH---HHHHHHHHhc-CCC----CCCceeeecCccCCCCC------------cHHHHHHHHHH-h-hhCC
Q 020546 63 RICGDVH--GQY---QDLLRLFEHG-GYP----PTANYLFLGDYVDRGKQ------------SLETICLLLAY-K-IRYP 118 (325)
Q Consensus 63 ~ViGDIH--G~~---~~L~~il~~~-~~~----~~~~~vfLGD~VDRG~~------------s~evl~ll~~L-k-~~~p 118 (325)
++|+|+| +.. ..+..+++.. +.. ..+.+|++||++|+... ..+.+..+..+ + +...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 5799999 332 2223333322 221 23678899999997310 01112222222 1 1224
Q ss_pred CcEEEEcCCcchhh
Q 020546 119 DKIHLLRGNHEDAK 132 (325)
Q Consensus 119 ~~v~~LrGNHE~~~ 132 (325)
-.|+++.||||...
T Consensus 82 ~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 IKIIIIPGNHDAVR 95 (243)
T ss_pred CeEEEeCCCCCccc
Confidence 57999999999853
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.55 E-value=0.0045 Score=55.31 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=33.9
Q ss_pred CCCceeeecCccCCCCCc--HHHHHHHHHHhhhCC----CcEEEEcCCcchh
Q 020546 86 PTANYLFLGDYVDRGKQS--LETICLLLAYKIRYP----DKIHLLRGNHEDA 131 (325)
Q Consensus 86 ~~~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p----~~v~~LrGNHE~~ 131 (325)
..+.++|+||++|.|+.+ .+....+..++..++ -.++.|.||||--
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 467788999999999964 345666666654332 4788999999974
No 87
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.49 E-value=0.0061 Score=52.34 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=42.5
Q ss_pred cEEEEcCCCC------------CHHHHHHHH-Hh--cCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEc
Q 020546 61 PIRICGDVHG------------QYQDLLRLF-EH--GGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (325)
Q Consensus 61 ~i~ViGDIHG------------~~~~L~~il-~~--~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~Lr 125 (325)
.++.+||.|= +.+....++ .. .-..|++.+.+|||+.-.-...-+...++- +-++++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHH----HcCCcEEEee
Confidence 3678888883 333333322 11 113467788899999864433333332222 3488999999
Q ss_pred CCcchhhhhh
Q 020546 126 GNHEDAKINR 135 (325)
Q Consensus 126 GNHE~~~~~~ 135 (325)
||||..--..
T Consensus 81 GNhDk~~~~~ 90 (186)
T COG4186 81 GNHDKCHPMY 90 (186)
T ss_pred CCCCCCcccc
Confidence 9999865443
No 88
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.23 E-value=0.013 Score=57.52 Aligned_cols=75 Identities=21% Similarity=0.185 Sum_probs=53.9
Q ss_pred CcEEEEcCCCCC-------------HHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCC---CcEEE
Q 020546 60 APIRICGDVHGQ-------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYP---DKIHL 123 (325)
Q Consensus 60 ~~i~ViGDIHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p---~~v~~ 123 (325)
+|+..++|.|=- +.+|..+++.+.-...+-+|.-||++|++.-|.+++..+...-.+.. -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999944 34455555555545557788999999999888888776655433222 48999
Q ss_pred EcCCcchhhhh
Q 020546 124 LRGNHEDAKIN 134 (325)
Q Consensus 124 LrGNHE~~~~~ 134 (325)
|.||||.....
T Consensus 81 I~GNHD~~~~~ 91 (390)
T COG0420 81 IAGNHDSPSRL 91 (390)
T ss_pred ecCCCCchhcc
Confidence 99999987544
No 89
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.86 E-value=0.015 Score=53.26 Aligned_cols=66 Identities=27% Similarity=0.282 Sum_probs=42.3
Q ss_pred cEEEEcCCCCCH---------HHHHHHHHhcCCC-CCCceeeecCccCCCCCcH-----HHHHHHHHHhhhCCCcEEEEc
Q 020546 61 PIRICGDVHGQY---------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLR 125 (325)
Q Consensus 61 ~i~ViGDIHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~-----evl~ll~~Lk~~~p~~v~~Lr 125 (325)
+|+.++|+||.+ ..+.++++...-. ++..++..||+++..+.+. .++..+-++ +-.+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578999999886 5566666664433 3445678999999887643 333333222 2233 445
Q ss_pred CCcchh
Q 020546 126 GNHEDA 131 (325)
Q Consensus 126 GNHE~~ 131 (325)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 90
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.64 E-value=0.18 Score=43.02 Aligned_cols=116 Identities=26% Similarity=0.412 Sum_probs=78.6
Q ss_pred EEEEcCCCC--CHHHHHHHHHhcCCCCC-CceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhC
Q 020546 62 IRICGDVHG--QYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (325)
Q Consensus 62 i~ViGDIHG--~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~g 138 (325)
+.++||+|= ...+|-.=|++.-.|.. .+++++|++ .|.|++.+|..+ .++++++||.-|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 678999984 23445455555545554 568899996 578889988666 35899999977653
Q ss_pred chHHHHHHHhHHHHHHHhhhhhcCCeEEEEc---CcEEEecCCCCCCCCCHHHhhccCCCCCCCCCchhhhccccCCCCC
Q 020546 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDAN 215 (325)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsdP~~~ 215 (325)
...|..-++. =++-|+||-.- +-|.||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 1223332222 27899999421 2365553
Q ss_pred CCCcccCCCCcccccChhHHHHHHHhCCCceEEEeeEeeecCeEE
Q 020546 216 IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (325)
Q Consensus 216 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 260 (325)
++.-.-++.+++.++-||++..+.|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 466667788999999999998877763
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.56 E-value=0.027 Score=50.29 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHHhcCC-CCCCceeeecCccCCCCCcHH-HHHHHHHHhhhC---------------------CCcEEE
Q 020546 67 DVHGQYQDLLRLFEHGGY-PPTANYLFLGDYVDRGKQSLE-TICLLLAYKIRY---------------------PDKIHL 123 (325)
Q Consensus 67 DIHG~~~~L~~il~~~~~-~~~~~~vfLGD~VDRG~~s~e-vl~ll~~Lk~~~---------------------p~~v~~ 123 (325)
|++|+=.=|.++++.+.. -..+.++||||++|.|--+-+ -...+..++..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556766667777766443 345778899999998753322 223344443322 145789
Q ss_pred EcCCcchh
Q 020546 124 LRGNHEDA 131 (325)
Q Consensus 124 LrGNHE~~ 131 (325)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999983
No 92
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.44 E-value=0.18 Score=47.33 Aligned_cols=72 Identities=24% Similarity=0.254 Sum_probs=42.4
Q ss_pred EEEEcCCCCC---HHHHHHHHHhcCC--CCCCceeeecCccCCCCCcH--H------HHHHHHHHhhhCCC-cEEEEcCC
Q 020546 62 IRICGDVHGQ---YQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSL--E------TICLLLAYKIRYPD-KIHLLRGN 127 (325)
Q Consensus 62 i~ViGDIHG~---~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~Lk~~~p~-~v~~LrGN 127 (325)
..-.|+-. | ...+.++++.+.- ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 33455554 3 3445555554332 35677889999998876431 1 12223334444443 79999999
Q ss_pred cchhhhh
Q 020546 128 HEDAKIN 134 (325)
Q Consensus 128 HE~~~~~ 134 (325)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9986543
No 93
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.33 E-value=0.52 Score=43.96 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=30.7
Q ss_pred CceEEEeeEeeecCeEEec--CCeEEEEeeCCCCCCCCCCceeEEEec-CCceeEEE
Q 020546 244 LDLICRGHQVVEDGYEFFA--RRRLVTIFSAPNYGGEFDNAGALLSVN-ESLVCSFE 297 (325)
Q Consensus 244 ~~~iIrgH~~~~~G~~~~~--~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~ 297 (325)
-+.++.|||+.. |.+... +++-+.+.|.|.|.. .|.++.+| +++++...
T Consensus 204 PhVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 204 PHVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPI 255 (257)
T ss_pred CCEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEE
Confidence 456789999863 444442 366778889999864 45555554 34555443
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.00 E-value=0.074 Score=48.81 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=45.3
Q ss_pred ecCcEEEEcCCCCCHHHHH----------------HHHH-hcCCCCCCceeeecCccCCCCCc-----HHHHHHHHHHhh
Q 020546 58 VEAPIRICGDVHGQYQDLL----------------RLFE-HGGYPPTANYLFLGDYVDRGKQS-----LETICLLLAYKI 115 (325)
Q Consensus 58 ~~~~i~ViGDIHG~~~~L~----------------~il~-~~~~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~ 115 (325)
...++.||+|+|=-+.... +.++ ....-..+++|.+||+-.-.+.+ .++-.++..++
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~- 96 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD- 96 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-
Confidence 3578999999996554332 2222 11223457899999998654432 34433333333
Q ss_pred hCCCcEEEEcCCcchhhhh
Q 020546 116 RYPDKIHLLRGNHEDAKIN 134 (325)
Q Consensus 116 ~~p~~v~~LrGNHE~~~~~ 134 (325)
.. .+++++||||...-.
T Consensus 97 ~~--evi~i~GNHD~~i~~ 113 (235)
T COG1407 97 ER--EVIIIRGNHDNGIEE 113 (235)
T ss_pred cC--cEEEEeccCCCcccc
Confidence 22 599999999986543
No 95
>PLN02533 probable purple acid phosphatase
Probab=94.98 E-value=0.032 Score=55.71 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=40.4
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcH--HH-HHHHHHHhhhCCCcEEEEcCCcchhh
Q 020546 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--ET-ICLLLAYKIRYPDKIHLLRGNHEDAK 132 (325)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--ev-l~ll~~Lk~~~p~~v~~LrGNHE~~~ 132 (325)
.-+++++||+|-. ......++.+.....+-+|++||+++-+...- +. ..++..+... -.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 3468999999632 22223333333334567889999998654321 11 1222222222 35789999999864
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.73 E-value=0.064 Score=49.74 Aligned_cols=70 Identities=21% Similarity=0.167 Sum_probs=40.1
Q ss_pred cEEEEcCCCCC--H--HHHHHHHH-hcCCCCCCceeeecCcc-CCCCCcH------HHHHHHHHHhhhCCCcEEEEcCCc
Q 020546 61 PIRICGDVHGQ--Y--QDLLRLFE-HGGYPPTANYLFLGDYV-DRGKQSL------ETICLLLAYKIRYPDKIHLLRGNH 128 (325)
Q Consensus 61 ~i~ViGDIHG~--~--~~L~~il~-~~~~~~~~~~vfLGD~V-DRG~~s~------evl~ll~~Lk~~~p~~v~~LrGNH 128 (325)
+++++||.-.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998763 1 23333332 23224456788999997 5554221 222222221 11344799999999
Q ss_pred chh
Q 020546 129 EDA 131 (325)
Q Consensus 129 E~~ 131 (325)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 97
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.41 E-value=0.055 Score=50.52 Aligned_cols=65 Identities=22% Similarity=0.174 Sum_probs=37.1
Q ss_pred cEEEEcCCCCCH----------------HHHHHHHHhcCCCCCCcee-eecCccCCCCCc-----------HHHHHHHHH
Q 020546 61 PIRICGDVHGQY----------------QDLLRLFEHGGYPPTANYL-FLGDYVDRGKQS-----------LETICLLLA 112 (325)
Q Consensus 61 ~i~ViGDIHG~~----------------~~L~~il~~~~~~~~~~~v-fLGD~VDRG~~s-----------~evl~ll~~ 112 (325)
+|+.++|+||.+ ..+..+++...-...+.++ ..||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999996 3345555554332223333 479999865422 123333333
Q ss_pred HhhhCCCcEEEEcCCcch
Q 020546 113 YKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 113 Lk~~~p~~v~~LrGNHE~ 130 (325)
+ -. . ++..||||.
T Consensus 82 ~---g~-d-~~~lGNHe~ 94 (277)
T cd07410 82 L---GY-D-AGTLGNHEF 94 (277)
T ss_pred c---CC-C-EEeecccCc
Confidence 2 22 3 455699996
No 98
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=93.86 E-value=0.18 Score=39.84 Aligned_cols=46 Identities=20% Similarity=0.350 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 020546 8 GMMDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEV 58 (325)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~l~~ 58 (325)
+.++.+++.++|++..++ + .|+...+..|+.++.++|+++|+++++
T Consensus 50 ~~it~efv~~mie~FK~~---K--~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 50 EPITLEFVKAMIEWFKNQ---K--KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp TB--HHHHHHHHHHHHCT---------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCHHHHHHHHHHHHhC---C--CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 568888899999998644 3 477999999999999999999999986
No 99
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.27 E-value=0.12 Score=47.91 Aligned_cols=69 Identities=17% Similarity=0.075 Sum_probs=39.7
Q ss_pred cEEEEcCCCCCH----------HHHHHHHHhcCCCCCCceeeecCccCCCCCcHHH--HHHHHHHhhhCCCcEEEEcCCc
Q 020546 61 PIRICGDVHGQY----------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLET--ICLLLAYKIRYPDKIHLLRGNH 128 (325)
Q Consensus 61 ~i~ViGDIHG~~----------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~ev--l~ll~~Lk~~~p~~v~~LrGNH 128 (325)
+++-++|+||++ ..+..+++...-.+++.++..||+++..+.+... -..+..++.. .-.+ ...|||
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~-g~d~-~~~GNH 79 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV-GYDA-VTPGNH 79 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc-CCcE-Eccccc
Confidence 577889999985 3455566554333456677799999876543110 1112222222 2244 456999
Q ss_pred chh
Q 020546 129 EDA 131 (325)
Q Consensus 129 E~~ 131 (325)
|..
T Consensus 80 efd 82 (257)
T cd07408 80 EFD 82 (257)
T ss_pred ccc
Confidence 963
No 100
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.30 E-value=0.26 Score=48.77 Aligned_cols=71 Identities=25% Similarity=0.353 Sum_probs=46.8
Q ss_pred CcEEEEcCCC--CC---------H------HHHHHHHHhcCCC-CCCceeeecCccCCCCCc--HHHHHHHHHHhhhCCC
Q 020546 60 APIRICGDVH--GQ---------Y------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQS--LETICLLLAYKIRYPD 119 (325)
Q Consensus 60 ~~i~ViGDIH--G~---------~------~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p~ 119 (325)
.++..|+|-| |+ + .-|.+.+....+. ..+.++||||++|-|... -|=-....+++..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 4688888866 31 1 1234455544443 345677899999988754 3445556666666665
Q ss_pred ----cEEEEcCCcch
Q 020546 120 ----KIHLLRGNHED 130 (325)
Q Consensus 120 ----~v~~LrGNHE~ 130 (325)
.+..+.||||-
T Consensus 129 k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCeeEEeCCcccc
Confidence 78999999996
No 101
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.27 E-value=0.16 Score=47.99 Aligned_cols=66 Identities=26% Similarity=0.274 Sum_probs=40.3
Q ss_pred cEEEEcCCCCCHHH--------------HHHHHHhcCC-CCCCceeeecCccCCCCC-c-----HHHHHHHHHHhhhCCC
Q 020546 61 PIRICGDVHGQYQD--------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQ-S-----LETICLLLAYKIRYPD 119 (325)
Q Consensus 61 ~i~ViGDIHG~~~~--------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~-s-----~evl~ll~~Lk~~~p~ 119 (325)
+|+.+.|+||++.. +..+++.... .++..++..||++...+. + ..++..+-++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 57889999998553 5555655433 234556679999986654 2 13344443332 2
Q ss_pred cEEEEcCCcchh
Q 020546 120 KIHLLRGNHEDA 131 (325)
Q Consensus 120 ~v~~LrGNHE~~ 131 (325)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 33 555999964
No 102
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=92.08 E-value=0.26 Score=43.48 Aligned_cols=74 Identities=19% Similarity=0.237 Sum_probs=45.3
Q ss_pred CCCCceeeecCcc--CCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcC
Q 020546 85 PPTANYLFLGDYV--DRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCL 162 (325)
Q Consensus 85 ~~~~~~vfLGD~V--DRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 162 (325)
.+++.++.-||+- -|=+...+=+.++-+| |+.=+++|||||.+.-.. ..+...+... ....++.|+.+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEe
Confidence 3556677789974 3445555556666544 889999999999986531 2233333322 34456667766
Q ss_pred CeEEEEc
Q 020546 163 PVAALIN 169 (325)
Q Consensus 163 Plaa~i~ 169 (325)
-+| +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 644 444
No 103
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=90.37 E-value=2.9 Score=37.10 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=68.1
Q ss_pred CceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCch----------------HHHHHHHhHHH
Q 020546 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY----------------DECKRRFNVRL 151 (325)
Q Consensus 88 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 151 (325)
..+||+|- |-+.-|.+.++-.|+.+|.++-++ .|+-|.+..+....|. .|..+.|-..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 46889985 889999999999999988877666 8999999887755443 34444555578
Q ss_pred HHHHhhhhhcCCeEEEEcCcEEEecC
Q 020546 152 WKIFTDCFNCLPVAALINEKILCMHG 177 (325)
Q Consensus 152 ~~~~~~~f~~LPlaa~i~~~il~vHg 177 (325)
|..+...+.++++...+..+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888999999888888888887
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=90.22 E-value=0.79 Score=44.54 Aligned_cols=74 Identities=24% Similarity=0.433 Sum_probs=48.1
Q ss_pred CcEEEEcCCCCCHHHHHH---HHHhcCCCCCCceeeecCccC-CCC---CcHHH---HHHHHHH------hhhCCCcEEE
Q 020546 60 APIRICGDVHGQYQDLLR---LFEHGGYPPTANYLFLGDYVD-RGK---QSLET---ICLLLAY------KIRYPDKIHL 123 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~---il~~~~~~~~~~~vfLGD~VD-RG~---~s~ev---l~ll~~L------k~~~p~~v~~ 123 (325)
+||.|=|=-||.++.+-+ ..++.|-.+.+.++++||+=. |.. +++.| +.-+-.. ....|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999999999984 445566667788999999852 211 11111 1111111 2345656788
Q ss_pred EcCCcchhhh
Q 020546 124 LRGNHEDAKI 133 (325)
Q Consensus 124 LrGNHE~~~~ 133 (325)
+=||||.++.
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999753
No 105
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=89.50 E-value=0.58 Score=43.41 Aligned_cols=65 Identities=22% Similarity=0.184 Sum_probs=36.0
Q ss_pred cEEEEcCCCCCHH----------------------HHHHHHHhcCCC--CCCceeeecCccCCCCCcH-----HHHHHHH
Q 020546 61 PIRICGDVHGQYQ----------------------DLLRLFEHGGYP--PTANYLFLGDYVDRGKQSL-----ETICLLL 111 (325)
Q Consensus 61 ~i~ViGDIHG~~~----------------------~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~-----evl~ll~ 111 (325)
.+..++|+||++. .+..+++...-. ++..++..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3667889998743 334455543322 3333456999998776432 2233332
Q ss_pred HHhhhCCCcEEEEcCCcchh
Q 020546 112 AYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 112 ~Lk~~~p~~v~~LrGNHE~~ 131 (325)
. .+-.+.. ||||..
T Consensus 82 ~----~g~da~~--GNHefd 95 (264)
T cd07411 82 A----LGVDAMV--GHWEFT 95 (264)
T ss_pred h----hCCeEEe--cccccc
Confidence 2 2333333 999964
No 106
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=87.48 E-value=1.5 Score=42.35 Aligned_cols=48 Identities=19% Similarity=0.187 Sum_probs=30.2
Q ss_pred CCCCceeeecCccCCCCCcHH---HHHHHHHHhhhCCCcEEEEcCCcchhhh
Q 020546 85 PPTANYLFLGDYVDRGKQSLE---TICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (325)
Q Consensus 85 ~~~~~~vfLGD~VDRG~~s~e---vl~ll~~Lk~~~p~~v~~LrGNHE~~~~ 133 (325)
...+.+||+||.|+. ..... ++.-..+=.+.+.=....+.||||....
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 446789999999996 33333 2322222233444467889999998643
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.42 E-value=0.69 Score=52.02 Aligned_cols=66 Identities=18% Similarity=0.088 Sum_probs=38.9
Q ss_pred CcEEEEcCCCCCH---HHHHHHHHhcCC-CCCCceeeecCccCCCCCcH-----HHHHHHHHHhhhCCCcEEEEcCCcch
Q 020546 60 APIRICGDVHGQY---QDLLRLFEHGGY-PPTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 60 ~~i~ViGDIHG~~---~~L~~il~~~~~-~~~~~~vfLGD~VDRG~~s~-----evl~ll~~Lk~~~p~~v~~LrGNHE~ 130 (325)
..|+.++|+||.+ ..+..+++...- .++..++..||++++.+.+. .++..+-.+ . --+...||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l---g--~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM---G--YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc---C--CCEEEeccccc
Confidence 3588999999985 444444544322 23333344899999776442 333333222 1 22568999997
No 108
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=87.10 E-value=1.3 Score=41.51 Aligned_cols=66 Identities=18% Similarity=0.119 Sum_probs=36.9
Q ss_pred cEEEEcCCCCCH---------------------HHHHHHHHhcCC-CCCCceeeecCccCCCCCc-----HHHHHHHHHH
Q 020546 61 PIRICGDVHGQY---------------------QDLLRLFEHGGY-PPTANYLFLGDYVDRGKQS-----LETICLLLAY 113 (325)
Q Consensus 61 ~i~ViGDIHG~~---------------------~~L~~il~~~~~-~~~~~~vfLGD~VDRG~~s-----~evl~ll~~L 113 (325)
+++-++|+||++ ..+..+++...- .++..++..||+++..+.+ ...+.. +
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~---l 78 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEF---M 78 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHH---H
Confidence 467789999875 334445554332 2333455589999876533 222222 2
Q ss_pred hhhCCCcEEEEcCCcchh
Q 020546 114 KIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 114 k~~~p~~v~~LrGNHE~~ 131 (325)
+..-. .+.. .||||..
T Consensus 79 n~~g~-D~~~-lGNHefd 94 (281)
T cd07409 79 NLLGY-DAMT-LGNHEFD 94 (281)
T ss_pred HhcCC-CEEE-ecccccc
Confidence 32222 3444 4999964
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=86.21 E-value=1.3 Score=41.45 Aligned_cols=67 Identities=16% Similarity=0.084 Sum_probs=47.0
Q ss_pred CcEEEEcCCCCC--HHHHHHHHHhcCCCC-CCceeeecCccCCC-CCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 60 APIRICGDVHGQ--YQDLLRLFEHGGYPP-TANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 60 ~~i~ViGDIHG~--~~~L~~il~~~~~~~-~~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
++|.++|||=|. ...+...|..+...- .+-+|..||....| .-+-++...|..+ .-+++.+ |||+..
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 579999999999 566666666544332 34555689999766 4567777777654 3466666 999875
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.10 E-value=1.2 Score=39.49 Aligned_cols=72 Identities=11% Similarity=0.122 Sum_probs=40.8
Q ss_pred EEEEcCCCCC-----HHHHHHHHHhcC-CCCCCceeeecCccCCCCCcH----------HHHHHHHHHhh-----hCCCc
Q 020546 62 IRICGDVHGQ-----YQDLLRLFEHGG-YPPTANYLFLGDYVDRGKQSL----------ETICLLLAYKI-----RYPDK 120 (325)
Q Consensus 62 i~ViGDIHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~VDRG~~s~----------evl~ll~~Lk~-----~~p~~ 120 (325)
|++++|+|=. ++.|.+++.... ....+.+|++|+++|.-.... .....+..+.. ..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677888755 667778887776 556678999999999632221 11111111111 12248
Q ss_pred EEEEcCCcchhhh
Q 020546 121 IHLLRGNHEDAKI 133 (325)
Q Consensus 121 v~~LrGNHE~~~~ 133 (325)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998655
No 111
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=85.41 E-value=1.6 Score=40.39 Aligned_cols=56 Identities=25% Similarity=0.169 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCc-----HHHHHHHHHHhhhCCCcEEEEcCCcch
Q 020546 70 GQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDKIHLLRGNHED 130 (325)
Q Consensus 70 G~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~~LrGNHE~ 130 (325)
|.+..+..+++...-. ++.-++..||+++..+.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765433 334566799999877532 34444443332 22557899996
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=82.93 E-value=1.6 Score=41.09 Aligned_cols=66 Identities=20% Similarity=0.025 Sum_probs=35.2
Q ss_pred cEEEEcCCCCCHHH----------HHHHHHhcCC-----CCCCceeeecCccCCCCCc-----HHHHHHHHHHhhhCCCc
Q 020546 61 PIRICGDVHGQYQD----------LLRLFEHGGY-----PPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDK 120 (325)
Q Consensus 61 ~i~ViGDIHG~~~~----------L~~il~~~~~-----~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~ 120 (325)
.|+.+.|+||++.. +..+++...- .++..++-.||.+...+.+ .-++.++-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 46788999998633 3344443221 2344455699998433322 12233333332 24
Q ss_pred EEEEcCCcchh
Q 020546 121 IHLLRGNHEDA 131 (325)
Q Consensus 121 v~~LrGNHE~~ 131 (325)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 113
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=82.79 E-value=0.038 Score=54.01 Aligned_cols=194 Identities=11% Similarity=-0.097 Sum_probs=109.6
Q ss_pred CCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHHHHH----hHHHHHHHhhhhhcC
Q 020546 87 TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF----NVRLWKIFTDCFNCL 162 (325)
Q Consensus 87 ~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 162 (325)
.-..|+++++.+++.+.++.+-+-+..+..+..+....++||+... ++++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 3458899999999999999999988888889999999999995432 2222211111 123567778888888
Q ss_pred CeEEEEcCcEEEecCCCCCCCCCHHHhhccCCCC--CC-CCCchhhhccccCCCCCCCCcccCCCCcccccChhH--HHH
Q 020546 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPT--DI-PDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDV--VAD 237 (325)
Q Consensus 163 Plaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~--~~-~~~~~~~dlLWsdP~~~~~~~~~~~rg~g~~fg~~~--~~~ 237 (325)
+..++.+ ++++.||+..|.......+..+.-.. +. -..+.-..++=+|-.. ...|... +..-.||.+. .-+
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~~--~~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEKP--GHSPLFGYDFWYQPR 198 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-ecccccC--CCccccccceeeccc
Confidence 8887765 99999999999765443333221100 00 0000111122222111 1123211 1222222221 122
Q ss_pred HHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCC
Q 020546 238 FLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNES 291 (325)
Q Consensus 238 fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~ 291 (325)
+......+...+.|.....+.....++ .+.++.+-|.-...+.++.+.+..+
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 334444555556665543333333444 6667777776666677777777664
No 114
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.94 E-value=2.8 Score=42.05 Aligned_cols=69 Identities=22% Similarity=0.391 Sum_probs=52.0
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhcCCC--CCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCc
Q 020546 59 EAPIRICGDVHGQYQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (325)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNH 128 (325)
+.+|.|+||+-|.++.|.+-++...-. |-+.++++||+++-...+.|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 468999999999999998776654332 3467889999999777788887766443 35677778887765
No 115
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=79.50 E-value=2.3 Score=40.14 Aligned_cols=66 Identities=21% Similarity=0.066 Sum_probs=36.1
Q ss_pred cEEEEcCCCCCHHH-------------HHHHHHhc----CC-CCCCceeeecCccCCCCCcH-------HHHHHHHHHhh
Q 020546 61 PIRICGDVHGQYQD-------------LLRLFEHG----GY-PPTANYLFLGDYVDRGKQSL-------ETICLLLAYKI 115 (325)
Q Consensus 61 ~i~ViGDIHG~~~~-------------L~~il~~~----~~-~~~~~~vfLGD~VDRG~~s~-------evl~ll~~Lk~ 115 (325)
.|+-..|+||.+.. +.++.+.. .. .++..++..||.++.-+.+- -.+.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 57888999998641 22222211 11 23344556999997654331 1233332221
Q ss_pred hCCCcEEEEcCCcchh
Q 020546 116 RYPDKIHLLRGNHEDA 131 (325)
Q Consensus 116 ~~p~~v~~LrGNHE~~ 131 (325)
-=....||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 225778999994
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=78.88 E-value=2.5 Score=43.22 Aligned_cols=67 Identities=27% Similarity=0.283 Sum_probs=40.3
Q ss_pred CcEEEEcCCCCCHH------------HHHHH---HHhcCCC-CCCceeeecCccCCCCC------cHHHHHHHHHHhhhC
Q 020546 60 APIRICGDVHGQYQ------------DLLRL---FEHGGYP-PTANYLFLGDYVDRGKQ------SLETICLLLAYKIRY 117 (325)
Q Consensus 60 ~~i~ViGDIHG~~~------------~L~~i---l~~~~~~-~~~~~vfLGD~VDRG~~------s~evl~ll~~Lk~~~ 117 (325)
.+|+-..|+||++. .+.++ ++...-. ++..+|=.||+++..+- ....+.++-.++.
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y-- 104 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY-- 104 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC--
Confidence 47888999999998 33332 3322221 23344559999998432 2334555544432
Q ss_pred CCcEEEEcCCcchh
Q 020546 118 PDKIHLLRGNHEDA 131 (325)
Q Consensus 118 p~~v~~LrGNHE~~ 131 (325)
+ ..-.||||.-
T Consensus 105 -D--a~tiGNHEFd 115 (517)
T COG0737 105 -D--AMTLGNHEFD 115 (517)
T ss_pred -c--EEeecccccc
Confidence 2 5677999985
No 117
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=77.02 E-value=4.4 Score=38.12 Aligned_cols=93 Identities=18% Similarity=0.194 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeee---------cCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCC
Q 020546 32 QLSESEIRQLCVNARQIFLSQPNLVEV---------EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ 102 (325)
Q Consensus 32 ~l~~~~~~~l~~~~~~~l~~ep~~l~~---------~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~ 102 (325)
+++++......+-++..=.-+|++-.+ ..+.+.|+|.|+...+.. ..++.+.++-+||+-.-|.
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 455555555555444444445543333 136899999998655543 3556677788999987664
Q ss_pred cHHHHHHHHHHhhhCC-CcEEEEcCCcchhh
Q 020546 103 SLETICLLLAYKIRYP-DKIHLLRGNHEDAK 132 (325)
Q Consensus 103 s~evl~ll~~Lk~~~p-~~v~~LrGNHE~~~ 132 (325)
+-||..+=..+- ..| ++=+.|+||||.-.
T Consensus 98 ~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 98 PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 555554432221 122 35578999999853
No 118
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=76.43 E-value=5.5 Score=37.08 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=42.2
Q ss_pred cEEEEcCCCCCHH--HHHHHHHhcCCC-CCCceeeecCccCCC-CCcHHHHHHHHHHhhhCCCcEEEEcCCcchh
Q 020546 61 PIRICGDVHGQYQ--DLLRLFEHGGYP-PTANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 61 ~i~ViGDIHG~~~--~L~~il~~~~~~-~~~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+|.+||||=|.-. .+.+.+....-. +.+-++-.||..-.| .-+.++...|..+. -.+..+ ||||..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5789999999853 344455443222 234455689998766 36677777776553 355555 999764
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=75.99 E-value=4.1 Score=39.03 Aligned_cols=65 Identities=20% Similarity=0.086 Sum_probs=37.6
Q ss_pred cEEEEcCCCCCHH------HHHHHHHhcCC-----CCCCceeeecCccCCCCC-------------cHHHHHHHHHHhhh
Q 020546 61 PIRICGDVHGQYQ------DLLRLFEHGGY-----PPTANYLFLGDYVDRGKQ-------------SLETICLLLAYKIR 116 (325)
Q Consensus 61 ~i~ViGDIHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~Lk~~ 116 (325)
.|+-..|+||++. .+..+++...- .++..++..||.+..++. ..-++.++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 3667899999953 33333443221 234556679999876543 2233344433332
Q ss_pred CCCcEEEEcCCcch
Q 020546 117 YPDKIHLLRGNHED 130 (325)
Q Consensus 117 ~p~~v~~LrGNHE~ 130 (325)
=.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 2567899996
No 120
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=75.87 E-value=9.1 Score=36.35 Aligned_cols=73 Identities=14% Similarity=0.225 Sum_probs=48.8
Q ss_pred CcEEEEcCCCCC----HHHHHHHHHhcC-CCC----CCceeeecCccCCC----CCc----HHHHHHHHHH-hhhCC---
Q 020546 60 APIRICGDVHGQ----YQDLLRLFEHGG-YPP----TANYLFLGDYVDRG----KQS----LETICLLLAY-KIRYP--- 118 (325)
Q Consensus 60 ~~i~ViGDIHG~----~~~L~~il~~~~-~~~----~~~~vfLGD~VDRG----~~s----~evl~ll~~L-k~~~p--- 118 (325)
..++|+||+|=+ ++.|.++|+... ..+ ..-+||+|++.-+. ..+ .|-+.-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 468999999944 788888888762 222 45689999999763 222 2334444432 23444
Q ss_pred --CcEEEEcCCcchhh
Q 020546 119 --DKIHLLRGNHEDAK 132 (325)
Q Consensus 119 --~~v~~LrGNHE~~~ 132 (325)
.++++++|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 69999999999753
No 121
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=70.91 E-value=5.6 Score=40.99 Aligned_cols=68 Identities=19% Similarity=0.047 Sum_probs=36.8
Q ss_pred cCcEEEEcCCCCCHHH----------HHHHHHhcC-----CCCCCceeeecCccCCCCCc-----HHHHHHHHHHhhhCC
Q 020546 59 EAPIRICGDVHGQYQD----------LLRLFEHGG-----YPPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYP 118 (325)
Q Consensus 59 ~~~i~ViGDIHG~~~~----------L~~il~~~~-----~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p 118 (325)
+-.|+-+.|+||++.. +..+++... -.++..+|.-||.+...+.+ .-++.++-.+ +
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 3468889999998742 223333321 12345566799998643322 1122223222 2
Q ss_pred CcEEEEcCCcchh
Q 020546 119 DKIHLLRGNHEDA 131 (325)
Q Consensus 119 ~~v~~LrGNHE~~ 131 (325)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 24444 4999964
No 122
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=70.89 E-value=7.6 Score=38.49 Aligned_cols=72 Identities=7% Similarity=-0.043 Sum_probs=40.9
Q ss_pred CcEEEEcCCCCCHHHHHH---HHHhc-CCCCCCceeeecCccCCCCCcHH------HHHHHHHHhh-hCCCcEEEEcCCc
Q 020546 60 APIRICGDVHGQYQDLLR---LFEHG-GYPPTANYLFLGDYVDRGKQSLE------TICLLLAYKI-RYPDKIHLLRGNH 128 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~---il~~~-~~~~~~~~vfLGD~VDRG~~s~e------vl~ll~~Lk~-~~p~~v~~LrGNH 128 (325)
-+.+++||-=+-...-.. .+... .-.+.+-+|-+||-++.|..++. .++-++.-.. ...-.++++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 478999996432222222 22221 22344566779999988877643 3333332211 0123789999999
Q ss_pred chh
Q 020546 129 EDA 131 (325)
Q Consensus 129 E~~ 131 (325)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 123
>PF14164 YqzH: YqzH-like protein
Probab=70.24 E-value=15 Score=26.86 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHHccC--CCccccCCHHHHHHHHHHHHHHHhhCCC
Q 020546 10 MDKVVLDDIIRRLLEGR--GGKQVQLSESEIRQLCVNARQIFLSQPN 54 (325)
Q Consensus 10 ~~~~~~~~~i~~~~~~~--~~~~~~l~~~~~~~l~~~~~~~l~~ep~ 54 (325)
|+...|+++|.+.+... .....+|++.+...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 56667899999988873 3456789999999999999999999886
No 124
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=70.08 E-value=5.7 Score=41.80 Aligned_cols=67 Identities=18% Similarity=0.052 Sum_probs=38.8
Q ss_pred CcEEEEcCCCCCHHH----------------HHHHHHhcCC-CCCCceeeecCccCCCCCc-------------HHHHHH
Q 020546 60 APIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQS-------------LETICL 109 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s-------------~evl~l 109 (325)
-+|+-..|+||++.. +..+++...- .++..+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367888999999753 3334443321 1344566799999865433 123333
Q ss_pred HHHHhhhCCCcEEEEcCCcchh
Q 020546 110 LLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 110 l~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+-.|. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 33332 125778999953
No 125
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=68.95 E-value=6.7 Score=41.46 Aligned_cols=69 Identities=17% Similarity=0.074 Sum_probs=41.2
Q ss_pred ecCcEEEEcCCCCCHHH----------------HHHHHHhcCC-CCCCceeeecCccCCCCCcH-------------HHH
Q 020546 58 VEAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQSL-------------ETI 107 (325)
Q Consensus 58 ~~~~i~ViGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s~-------------evl 107 (325)
...+|.-..|+||++.. +..+++...- .++..+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34588899999999743 2333443321 13455667999998665431 134
Q ss_pred HHHHHHhhhCCCcEEEEcCCcchh
Q 020546 108 CLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 108 ~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
..+-.|. -=....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 4443332 226778999963
No 126
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=68.51 E-value=4.8 Score=40.49 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=32.7
Q ss_pred CceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhh
Q 020546 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (325)
Q Consensus 88 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~ 133 (325)
+++=.+||+-||||++-.+++-|..+ ..+=+--||||--++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 55667999999999999998888654 256677899997655
No 127
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=68.41 E-value=6.1 Score=44.57 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=26.0
Q ss_pred CcEEEEcCCCCCHHH----------------HHHHHHhcCC-CCCCceeeecCccCCCC
Q 020546 60 APIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGK 101 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG~ 101 (325)
-+|+-..|+||++.. +..+++...- .++..+|-.||.+...+
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~ 100 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNP 100 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCh
Confidence 468999999998643 3334443322 13333445999998665
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=61.29 E-value=26 Score=36.16 Aligned_cols=54 Identities=20% Similarity=0.193 Sum_probs=41.1
Q ss_pred CcEEEEcCCCC------------CHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHH
Q 020546 60 APIRICGDVHG------------QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAY 113 (325)
Q Consensus 60 ~~i~ViGDIHG------------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~L 113 (325)
.+|.|-.|+|= .|..|..++..+.-...+-++.=||+++-..-|.+++--...+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 57889999983 3678889998877666777888999998877777766554444
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=59.51 E-value=16 Score=37.83 Aligned_cols=65 Identities=22% Similarity=0.053 Sum_probs=36.2
Q ss_pred EEEEcCCCCCHHH---------------------HHHHHHhcC-CCCCCceeeecCccCCCCCc-----HHHHHHHHHHh
Q 020546 62 IRICGDVHGQYQD---------------------LLRLFEHGG-YPPTANYLFLGDYVDRGKQS-----LETICLLLAYK 114 (325)
Q Consensus 62 i~ViGDIHG~~~~---------------------L~~il~~~~-~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk 114 (325)
|+-+.|+||++.. +..+++... -.++..++..||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887643 233333322 12445666799999755433 12233332332
Q ss_pred hhCCCcEEEEcCCcchh
Q 020546 115 IRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 115 ~~~p~~v~~LrGNHE~~ 131 (325)
-=....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 236778999963
No 130
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=58.10 E-value=14 Score=40.23 Aligned_cols=67 Identities=21% Similarity=0.101 Sum_probs=38.8
Q ss_pred CcEEEEcCCCCCHHHH----------------HHHHHhcCC-CCCCceeeecCccCCCCCc--------------HHHHH
Q 020546 60 APIRICGDVHGQYQDL----------------LRLFEHGGY-PPTANYLFLGDYVDRGKQS--------------LETIC 108 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L----------------~~il~~~~~-~~~~~~vfLGD~VDRG~~s--------------~evl~ 108 (325)
.+|+-..|+||++... ..+++...- .++..+|..||.+..-+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 4688899999996432 223333221 2344566799999765432 12444
Q ss_pred HHHHHhhhCCCcEEEEcCCcchh
Q 020546 109 LLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 109 ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
++-.|. -=....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 443332 225778999963
No 131
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=52.79 E-value=13 Score=35.12 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=42.3
Q ss_pred CcEEEEcCC--CCCHHHHHHHHHhcCCC---CCCceeeecCcc-CCCCCcHH------HHHHHHHHhhhCCCcEEEEcCC
Q 020546 60 APIRICGDV--HGQYQDLLRLFEHGGYP---PTANYLFLGDYV-DRGKQSLE------TICLLLAYKIRYPDKIHLLRGN 127 (325)
Q Consensus 60 ~~i~ViGDI--HG~~~~L~~il~~~~~~---~~~~~vfLGD~V-DRG~~s~e------vl~ll~~Lk~~~p~~v~~LrGN 127 (325)
-+++||||- +|.+..-+..++..... +.+-+|-+||=+ |-|..++- .+.=++.-. .-....+.+.||
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~p-SLQkpWy~vlGN 122 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAP-SLQKPWYSVLGN 122 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCc-ccccchhhhccC
Confidence 469999995 78887776666553322 234566799966 55654431 122221110 012368999999
Q ss_pred cchh
Q 020546 128 HEDA 131 (325)
Q Consensus 128 HE~~ 131 (325)
||.+
T Consensus 123 HDyr 126 (336)
T KOG2679|consen 123 HDYR 126 (336)
T ss_pred cccc
Confidence 9986
No 132
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=46.76 E-value=64 Score=24.32 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=47.4
Q ss_pred eecCcEEEEcCCCCCHHHHHHHHHhcCC--CCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCc
Q 020546 57 EVEAPIRICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (325)
Q Consensus 57 ~~~~~i~ViGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNH 128 (325)
.....+.||=|---|.+.+.++++.+.- +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 9 ~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 9 REPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3334577778877788888888876532 34456678999999888888766666666666666665555554
No 133
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=45.82 E-value=88 Score=26.92 Aligned_cols=102 Identities=17% Similarity=0.252 Sum_probs=61.3
Q ss_pred EEEcCCCCCHHHHHHHHHh-cCC------------CCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcc
Q 020546 63 RICGDVHGQYQDLLRLFEH-GGY------------PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (325)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~-~~~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE 129 (325)
++.+=.+||-..+.+.+.. ++. ..+..+||+|-.+|+|.-+-++..+|-.|+ +.+|++. |-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T-- 75 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GT-- 75 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Ee--
Confidence 4556678888777665543 222 234579999999999999999999987764 4565543 21
Q ss_pred hhhhhhhhCchHHHHHHHhHHHHHHHhhhhhcCCeEEEEcCcEEEecCCCCCCC
Q 020546 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL 183 (325)
Q Consensus 130 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~ 183 (325)
.|+.. ...|...+.+....++..= ..+- +.|+|+|-++|.+
T Consensus 76 -------~G~~~--~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 76 -------AGAGP--DSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred -------cCCCC--chHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH
Confidence 22221 1222333444444443332 2222 5788999988754
No 134
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=43.26 E-value=15 Score=30.86 Aligned_cols=85 Identities=26% Similarity=0.468 Sum_probs=46.4
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCce--eeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhhhhCchHHHH
Q 020546 67 DVHGQYQDLLRLFEHGGYPPTANY--LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECK 144 (325)
Q Consensus 67 DIHG~~~~L~~il~~~~~~~~~~~--vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~ 144 (325)
|+.|++..|++.|+.+++|..-.+ +-.|| +...+.++-..-..|+..|.-.. +...+..+..-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999844322 23443 22222222222233443222111 111122222233
Q ss_pred HHHhHHHHHHHhhhhhcCCeE
Q 020546 145 RRFNVRLWKIFTDCFNCLPVA 165 (325)
Q Consensus 145 ~~~~~~~~~~~~~~f~~LPla 165 (325)
.+|-+.+|+.+.+.|..-|.-
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 455667888888888887754
No 135
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=42.45 E-value=32 Score=37.26 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=25.7
Q ss_pred cCcEEEEcCCCCCHHH----------------HHHHHHhcCC-CCCCceeeecCccCCC
Q 020546 59 EAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRG 100 (325)
Q Consensus 59 ~~~i~ViGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG 100 (325)
.-+|+-..|+||++.. +..+++...- .++..+|-.||++-.-
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGs 97 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCc
Confidence 4578999999999632 2233333221 2345566799988543
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=41.08 E-value=24 Score=36.94 Aligned_cols=42 Identities=24% Similarity=0.425 Sum_probs=34.7
Q ss_pred ceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcCCcchhhhhh
Q 020546 89 NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINR 135 (325)
Q Consensus 89 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrGNHE~~~~~~ 135 (325)
++-.+||+.||||.+-.+++.|+.. ..|=+--||||--++..
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMGA 228 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHHH
Confidence 4557999999999999999999754 36778899999877644
No 137
>KOG2463 consensus Predicted RNA-binding protein Nob1p involved in 26S proteasome assembly [Posttranslational modification, protein turnover, chaperones]
Probab=39.06 E-value=93 Score=30.17 Aligned_cols=90 Identities=20% Similarity=0.210 Sum_probs=54.8
Q ss_pred CcccccChhHHHHHHHhCCCceEEEeeEeeecCeEEe-------cCCeEEEEee--CCCCCCCCCCc---eeEEEecCCc
Q 020546 225 GVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFF-------ARRRLVTIFS--APNYGGEFDNA---GALLSVNESL 292 (325)
Q Consensus 225 g~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~-------~~~~~iTvfS--a~~y~~~~~n~---ga~l~i~~~~ 292 (325)
-.++.-|--+++..|-..|+.++- .+|+.++ ....|+|||| .-.||..++|. -+.+.++++.
T Consensus 206 ~Vac~TtDfamQNVlLqm~L~l~~------~~G~~Ir~~r~~iLRCh~Cfsit~~m~k~FCp~CG~~TL~K~aVsv~~dG 279 (376)
T KOG2463|consen 206 LVACLTTDFAMQNVLLQMNLNLLA------MSGMKIRSVRSYILRCHGCFSITSEMPKDFCPSCGHKTLTKCAVSVDEDG 279 (376)
T ss_pred eeeeecccHHHHHHHHHhcccccC------ccchhhhhhhhheeEeeeeeEecCccchhcccccCCCeeeEEEEEecCCC
Confidence 346667777899999999987763 2444432 1245888887 34667666663 3346677776
Q ss_pred eeEEEEEcCCCCCCCCCcCCCCCCCCCCCCCC
Q 020546 293 VCSFEILKPADKSLPSSSNSKLPLKKPPKTGK 324 (325)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (325)
..+.++.+-.++ ..||-...|.+| |.||
T Consensus 280 ~~~~h~k~r~~~---n~RG~~YSlp~P-kGgk 307 (376)
T KOG2463|consen 280 NGQTHFKKRFQW---NNRGLQYSLPKP-KGGK 307 (376)
T ss_pred ceeEEeeccccc---ccCcceeecCCC-CCCc
Confidence 665554433333 455666666665 4455
No 138
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=35.56 E-value=62 Score=29.30 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=28.6
Q ss_pred HHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCC
Q 020546 235 VADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYG 276 (325)
Q Consensus 235 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~ 276 (325)
+.+.+-..|+++||-||+++..+++.. +++.| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 334444479999999999999999876 45555 57755543
No 139
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=34.70 E-value=65 Score=32.54 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCceEEEeeEeeecCeEEecCCeE
Q 020546 234 VVADFLDKNDLDLICRGHQVVEDGYEFFARRRL 266 (325)
Q Consensus 234 ~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~ 266 (325)
.++..+-++++++++-||.+.-+......+.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 689999999999999999987666554455444
No 140
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=32.08 E-value=1.6e+02 Score=27.33 Aligned_cols=57 Identities=23% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCcEEEEcCCcchhhhhhhhCchHHHH-HHH-hHHHHHHHhhhhhcCCeEEEEc-CcEEEecCCCCC
Q 020546 118 PDKIHLLRGNHEDAKINRIYGFYDECK-RRF-NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSP 181 (325)
Q Consensus 118 p~~v~~LrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p 181 (325)
..+|++|-||||.- .++.|. +.+. .+. ..+.| ..+..+|++-.-. .+++-.|-||-.
T Consensus 127 nknvvvlagnhein-~ngny~--arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 127 NKNVVVLAGNHEIN-FNGNYM--ARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ccceEEEecCceec-cCchHH--HHHhhCCCCccchh----hccccccccccCcchhhhhcccCcee
Confidence 46899999999974 233221 1111 011 12223 3456778774433 268888888854
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=31.56 E-value=1.8e+02 Score=29.06 Aligned_cols=66 Identities=14% Similarity=0.044 Sum_probs=47.3
Q ss_pred CcEEEEcCCCC-CHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhC-CCcEEEEcC
Q 020546 60 APIRICGDVHG-QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRY-PDKIHLLRG 126 (325)
Q Consensus 60 ~~i~ViGDIHG-~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~-p~~v~~LrG 126 (325)
..+.||=|-|. +.+.+.+.++.+...+..+++.+||+...|+.+.+...-+..+.... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 46888999555 57888888776554344578889999999999998887776654444 3455444 6
No 142
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.81 E-value=94 Score=30.18 Aligned_cols=60 Identities=18% Similarity=0.342 Sum_probs=39.2
Q ss_pred HHhhCCCeeeecCcEEEEcCCC-CCHHHHHHHHHhcCCCCCCceee-ecCcc--CCCCCcHHHHHHHHHHhh
Q 020546 48 IFLSQPNLVEVEAPIRICGDVH-GQYQDLLRLFEHGGYPPTANYLF-LGDYV--DRGKQSLETICLLLAYKI 115 (325)
Q Consensus 48 ~l~~ep~~l~~~~~i~ViGDIH-G~~~~L~~il~~~~~~~~~~~vf-LGD~V--DRG~~s~evl~ll~~Lk~ 115 (325)
-++.-|-.+.-.+.+.|+||.| |||.++... +..++| +-|+= .-|+....++.+..+|..
T Consensus 45 ~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 45 DMKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHhcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 3456676666677899999999 777766422 223444 55542 136777888888887754
No 143
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=30.05 E-value=1.4e+02 Score=23.60 Aligned_cols=43 Identities=21% Similarity=0.538 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEE
Q 020546 73 QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (325)
Q Consensus 73 ~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~L 124 (325)
..+.++++ .-|+.++|++|| -|..-.|+..-+ ...+|++|..+
T Consensus 53 ~~i~~i~~---~fP~~kfiLIGD---sgq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILR---DFPERKFILIGD---SGQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHHHHHH---HCCCCcEEEEee---CCCcCHHHHHHH---HHHCCCCEEEE
Confidence 44445544 456788999998 466667877654 44688877654
No 144
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=29.88 E-value=39 Score=31.70 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=25.3
Q ss_pred ceeeecCccCCCCCcHHHH-HHHHHHhhhCCCcEEEEcCCcchh
Q 020546 89 NYLFLGDYVDRGKQSLETI-CLLLAYKIRYPDKIHLLRGNHEDA 131 (325)
Q Consensus 89 ~~vfLGD~VDRG~~s~evl-~ll~~Lk~~~p~~v~~LrGNHE~~ 131 (325)
+++|+||+|.+ ...+.+ ..|-.+|.+++..+++. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 233332 55677788887766555 44443
No 145
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=29.69 E-value=5.1e+02 Score=24.87 Aligned_cols=97 Identities=21% Similarity=0.310 Sum_probs=59.0
Q ss_pred EEEEcCCCCCHHHHHHHHHhcCCC-CCCceeeecCccCCCCCcHHHHHHHHHHhh--hCCCcEEEE--cCCcchhhhhhh
Q 020546 62 IRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKI--RYPDKIHLL--RGNHEDAKINRI 136 (325)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~--~~p~~v~~L--rGNHE~~~~~~~ 136 (325)
+.|.| |+|+|.+....+.....+ ....++|+|--+.- -..-|...+|..+.. ..|+..++| =+..+...+...
T Consensus 132 l~v~~-l~gdy~~~l~~l~~~~~~~~~r~~~flGSsiGN-f~~~ea~~fL~~~~~~~l~~~d~lLiG~D~~k~~~~l~~A 209 (319)
T TIGR03439 132 VRCAG-LLGTYDDGLAWLKRPENRSRPTTILWLGSSIGN-FSRPEAAAFLAGFLATALSPSDSFLIGLDGCKDPDKVLRA 209 (319)
T ss_pred eEEEE-EEecHHHHHhhcccccccCCccEEEEeCccccC-CCHHHHHHHHHHHHHhhCCCCCEEEEecCCCCCHHHHHHH
Confidence 44444 889999988877542122 23456689977653 345777888877754 456655444 345555556666
Q ss_pred hCchHHHHHHHhHHHHHHHhhhhh
Q 020546 137 YGFYDECKRRFNVRLWKIFTDCFN 160 (325)
Q Consensus 137 ~gf~~e~~~~~~~~~~~~~~~~f~ 160 (325)
|.-.....+.|...+...+++.+.
T Consensus 210 Y~d~~gvTa~FnlN~L~~~Nr~Lg 233 (319)
T TIGR03439 210 YNDPGGVTRRFVLNGLVHANEILG 233 (319)
T ss_pred hcCCcchhHHHHHHHHHHHHHHhC
Confidence 655555666666666666665443
No 146
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=29.13 E-value=77 Score=28.57 Aligned_cols=39 Identities=28% Similarity=0.453 Sum_probs=27.8
Q ss_pred HHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCC
Q 020546 235 VADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNY 275 (325)
Q Consensus 235 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y 275 (325)
+.+.+-..|+++||-||+++..+++... ++.| +||-=|+
T Consensus 199 la~~l~~~G~D~IiG~H~Hv~q~~E~~~-~~~I-~YSlGNf 237 (239)
T cd07381 199 LARALIDAGADLVIGHHPHVLQGIEIYK-GKLI-FYSLGNF 237 (239)
T ss_pred HHHHHHHCCCCEEEcCCCCcCCCeEEEC-CEEE-EEcCCCc
Confidence 3444445799999999999999999854 4443 5665444
No 147
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=27.96 E-value=68 Score=29.82 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=26.1
Q ss_pred ceeeecCccCCCCCcHHHHHHHHHHhhhCCCcEEEEcC
Q 020546 89 NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRG 126 (325)
Q Consensus 89 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~LrG 126 (325)
+++|+||+|.+.-. .-+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEECC
Confidence 47899999987542 23456677888888777666544
No 148
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=26.90 E-value=98 Score=28.56 Aligned_cols=38 Identities=24% Similarity=0.495 Sum_probs=30.6
Q ss_pred ChhHHHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEee
Q 020546 231 GSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFS 271 (325)
Q Consensus 231 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfS 271 (325)
....+-+||+.+|... -+|++.+||.|++++-+|+||-
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~r 176 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFR 176 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEE
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEE
Confidence 4566889999999654 6889999999999887777764
No 149
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=23.53 E-value=1.3e+02 Score=27.34 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=29.8
Q ss_pred HHHHHHhCCCceEEEeeEeeecCeEEecCCeEEEEeeCCCCC
Q 020546 235 VADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYG 276 (325)
Q Consensus 235 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTvfSa~~y~ 276 (325)
+.+.|-..|.++||-+|.++..|++++ ++++| +||-=|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 444555589999999999999999987 44444 57765553
No 150
>PRK02135 hypothetical protein; Provisional
Probab=21.65 E-value=4.3e+02 Score=23.82 Aligned_cols=24 Identities=25% Similarity=0.378 Sum_probs=16.2
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcC
Q 020546 60 APIRICGDVHGQYQDLLRLFEHGG 83 (325)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~~ 83 (325)
.|++|.||=+|=-.+-.+.|+..|
T Consensus 147 ~~~FvLgDH~~~~~ee~~~L~~~g 170 (201)
T PRK02135 147 NPVFVLGDHIGFTEEEENLLKRLG 170 (201)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHhC
Confidence 357777777777677777766554
No 151
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=21.52 E-value=2.3e+02 Score=22.37 Aligned_cols=23 Identities=26% Similarity=0.561 Sum_probs=15.8
Q ss_pred HHHHHHHhhCCCeeeecCcEEEEcC
Q 020546 43 VNARQIFLSQPNLVEVEAPIRICGD 67 (325)
Q Consensus 43 ~~~~~~l~~ep~~l~~~~~i~ViGD 67 (325)
+++.+++.++|.+++ .||++.|+
T Consensus 75 ~e~~~~l~~~p~Lik--RPIi~~~~ 97 (105)
T cd03035 75 AKAIALMLEHPSLIK--RPVLETGG 97 (105)
T ss_pred HHHHHHHHhCcCeee--cceEEeCC
Confidence 567778888888877 36665543
No 152
>PF06861 BALF1: BALF1 protein; InterPro: IPR010677 Epstein-Barr virus (strain GD1) (HHV-4), a human tumour DNA virus and a prominent member of gamma-herpesviruses, encodes homologues of cellular antiapoptotic viral Bcl-2 proteins BALF1 and BHRF1. They protect the virus from apoptosis in its host cell during virus synthesis [, ]. The virus infects B lymphocytes to establish a latent infection and yield proliferating, growth-transformed B cells in vitro. Bcl-2 genes are essential for the initial evasion of apoptosis which allows it to establish a latent infection or cause cellular transformation, or both []. Bcl-2 family proteins can inhibit or induce programmed cell death in part by counteracting the activity of other BCL-2 family members. BALF1, inhibits the antiapoptotic activity of EBV BHRF1 and of KSBcl-2 in several transfected cell lines. BALF1 fails, however, to inhibit the cellular BCL-2 family member, BCL-x(L). Thus, BALF1 acts as a negative regulator of the survival function of BHRF1, similar to the counterbalance observed between cellular BCL-2 family members [].
Probab=20.53 E-value=1.6e+02 Score=25.95 Aligned_cols=85 Identities=21% Similarity=0.239 Sum_probs=55.5
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEcCCCCCHHHHHHHHHhcCCCCCCceeeecCccCCCCCcHHHHHHH
Q 020546 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL 110 (325)
Q Consensus 31 ~~l~~~~~~~l~~~~~~~l~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll 110 (325)
...++..+.+|+.++.+- ..-.++++.......||-|+....+..+++..= + -|.++.+=++..
T Consensus 51 Lt~~E~lL~~LVk~~iKk--~~~~~~elv~~~~~~~~~h~~iq~l~~iir~~Y----------~----D~~D~~~rL~~t 114 (182)
T PF06861_consen 51 LTTEEALLCWLVKQSIKK--NFKQLAELVCQPSHNADKHAHIQWLMSIIRAVY----------R----DHYDSWSRLCAT 114 (182)
T ss_pred CCcHHHHHHHHHHHHHHH--HHHHHHHHHhccCCCCchhHHHHHHHHHHHHHH----------h----chhhHHHHHHHH
Confidence 344555666666655432 233566666777899999999999999988632 1 255677767777
Q ss_pred HHHhhhCCCcEEEEcCCcchhhh
Q 020546 111 LAYKIRYPDKIHLLRGNHEDAKI 133 (325)
Q Consensus 111 ~~Lk~~~p~~v~~LrGNHE~~~~ 133 (325)
+++...| -++.+.+-||...+
T Consensus 115 La~a~~y--~~~~l~~d~e~~s~ 135 (182)
T PF06861_consen 115 LAYASMY--AMRNLLNDHENASL 135 (182)
T ss_pred HHHHHHH--HHHHhcCchHHHHH
Confidence 6666555 33566777776543
Done!