Query 020547
Match_columns 325
No_of_seqs 281 out of 2033
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:15:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 6.3E-81 1.4E-85 553.9 16.7 285 5-297 2-288 (303)
2 PTZ00480 serine/threonine-prot 100.0 9.1E-76 2E-80 554.6 30.6 299 3-301 8-308 (320)
3 KOG0374 Serine/threonine speci 100.0 6.5E-76 1.4E-80 557.4 26.9 293 2-294 5-303 (331)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3.3E-74 7.2E-79 540.6 29.9 289 6-294 2-292 (293)
5 PTZ00244 serine/threonine-prot 100.0 3.7E-74 7.9E-79 540.0 28.7 290 4-293 2-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 2.2E-73 4.8E-78 539.0 31.1 282 2-291 3-320 (321)
7 KOG0373 Serine/threonine speci 100.0 6.4E-75 1.4E-79 508.5 16.9 289 1-297 1-292 (306)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.9E-73 6.3E-78 532.4 28.3 282 6-295 2-285 (285)
9 PTZ00239 serine/threonine prot 100.0 1.4E-72 3E-77 530.9 28.3 284 6-297 3-289 (303)
10 smart00156 PP2Ac Protein phosp 100.0 4.3E-71 9.2E-76 515.2 29.6 269 26-294 1-270 (271)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 7E-71 1.5E-75 521.1 30.2 284 6-297 3-300 (305)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.8E-71 1E-75 523.6 28.3 288 2-297 12-307 (316)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.4E-69 2.9E-74 514.0 27.8 285 9-293 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 9.4E-67 2E-71 501.0 31.0 297 2-299 8-374 (377)
15 KOG0375 Serine-threonine phosp 100.0 5.9E-67 1.3E-71 485.1 11.7 272 25-297 60-345 (517)
16 KOG0371 Serine/threonine prote 100.0 7.4E-64 1.6E-68 447.5 11.5 283 6-296 20-304 (319)
17 KOG0377 Protein serine/threoni 100.0 4.7E-57 1E-61 427.6 14.1 267 25-292 133-430 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.8E-50 3.9E-55 390.0 14.2 281 24-305 181-471 (476)
19 cd00144 MPP_PPP_family phospho 100.0 8.6E-36 1.9E-40 269.2 19.7 214 55-279 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 1.2E-25 2.6E-30 202.2 17.0 176 55-265 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.6E-24 7.7E-29 197.2 15.5 119 55-175 4-146 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 6.1E-23 1.3E-27 186.4 16.6 115 55-172 2-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 2.3E-22 5.1E-27 187.8 18.0 215 55-284 4-262 (275)
24 cd07422 MPP_ApaH Escherichia c 99.9 6.4E-23 1.4E-27 189.8 12.5 118 55-176 2-126 (257)
25 cd07423 MPP_PrpE Bacillus subt 99.9 7.1E-22 1.5E-26 180.6 16.4 118 54-174 2-142 (234)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 3.4E-22 7.3E-27 185.8 11.9 121 55-180 4-131 (279)
27 PRK11439 pphA serine/threonine 99.9 2.2E-21 4.7E-26 175.7 10.6 112 55-172 20-146 (218)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.8 2.7E-20 5.8E-25 167.1 15.3 166 55-251 4-184 (207)
29 cd07421 MPP_Rhilphs Rhilph pho 99.8 2.9E-20 6.2E-25 173.3 15.6 186 55-269 5-283 (304)
30 PHA02239 putative protein phos 99.8 1.9E-20 4.1E-25 171.4 12.1 169 55-265 4-219 (235)
31 PRK09968 serine/threonine-spec 99.8 5.5E-19 1.2E-23 160.1 9.9 113 54-172 16-144 (218)
32 PF00149 Metallophos: Calcineu 99.3 1.6E-11 3.4E-16 101.8 11.6 156 55-246 4-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.1 3.1E-09 6.7E-14 90.4 15.4 80 56-172 4-86 (155)
34 cd07388 MPP_Tt1561 Thermus the 99.1 6.1E-09 1.3E-13 94.8 16.9 68 55-123 8-75 (224)
35 COG0639 ApaH Diadenosine tetra 99.1 1.9E-10 4.1E-15 95.2 5.1 143 125-268 3-154 (155)
36 PF12850 Metallophos_2: Calcin 99.0 9.4E-09 2E-13 86.7 12.7 133 56-264 5-137 (156)
37 cd07379 MPP_239FB Homo sapiens 98.9 7.6E-09 1.6E-13 86.4 10.1 116 55-251 3-120 (135)
38 PRK09453 phosphodiesterase; Pr 98.9 4.7E-09 1E-13 92.2 8.9 65 55-123 4-76 (182)
39 TIGR00040 yfcE phosphoesterase 98.9 3.9E-08 8.5E-13 84.2 13.3 59 56-123 5-64 (158)
40 cd00838 MPP_superfamily metall 98.8 7.9E-08 1.7E-12 77.2 11.2 117 56-252 2-120 (131)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.7 3.1E-07 6.7E-12 79.8 12.4 63 56-124 3-66 (188)
42 cd07397 MPP_DevT Myxococcus xa 98.7 2.1E-07 4.6E-12 85.3 11.4 154 55-247 4-208 (238)
43 cd07394 MPP_Vps29 Homo sapiens 98.6 1.8E-06 3.9E-11 75.9 16.1 56 56-123 4-65 (178)
44 cd07403 MPP_TTHA0053 Thermus t 98.5 8.2E-07 1.8E-11 73.9 10.5 106 56-251 2-107 (129)
45 cd07404 MPP_MS158 Microscilla 98.5 2.1E-07 4.6E-12 80.1 6.8 65 56-123 3-68 (166)
46 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 2E-06 4.4E-11 78.4 12.0 202 55-283 2-229 (231)
47 cd07400 MPP_YydB Bacillus subt 98.4 5E-06 1.1E-10 69.6 11.7 102 70-252 27-130 (144)
48 PRK05340 UDP-2,3-diacylglucosa 98.4 3.2E-06 6.8E-11 77.6 10.7 201 55-283 4-231 (241)
49 COG2129 Predicted phosphoester 98.4 3.1E-05 6.6E-10 69.9 16.5 202 55-283 7-217 (226)
50 cd07399 MPP_YvnB Bacillus subt 98.3 4.1E-05 8.8E-10 69.1 16.5 190 57-293 6-213 (214)
51 TIGR03729 acc_ester putative p 98.3 1.2E-05 2.6E-10 73.6 12.2 65 56-123 4-74 (239)
52 COG0622 Predicted phosphoester 98.2 7E-05 1.5E-09 65.6 14.9 155 55-293 5-165 (172)
53 cd07385 MPP_YkuE_C Bacillus su 97.9 1.4E-05 3.1E-10 71.6 5.6 67 56-124 6-77 (223)
54 PRK11340 phosphodiesterase Yae 97.9 2.3E-05 4.9E-10 73.3 6.6 63 59-123 57-125 (271)
55 cd07383 MPP_Dcr2 Saccharomyces 97.8 0.00077 1.7E-08 59.8 15.0 45 77-121 40-87 (199)
56 PRK04036 DNA polymerase II sma 97.8 0.0001 2.2E-09 74.9 10.4 66 57-124 249-344 (504)
57 PRK11148 cyclic 3',5'-adenosin 97.8 0.0015 3.3E-08 61.0 17.2 58 64-123 39-98 (275)
58 cd07395 MPP_CSTP1 Homo sapiens 97.8 0.00058 1.3E-08 63.1 13.9 57 67-123 36-99 (262)
59 cd08165 MPP_MPPE1 human MPPE1 97.7 0.00038 8.3E-09 59.8 10.2 47 78-124 38-90 (156)
60 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00021 4.6E-09 62.1 7.5 57 67-123 30-88 (172)
61 TIGR00619 sbcd exonuclease Sbc 97.5 0.0002 4.4E-09 66.3 6.6 59 65-123 26-88 (253)
62 cd07396 MPP_Nbla03831 Homo sap 97.5 0.00032 7E-09 65.3 7.4 62 64-125 26-88 (267)
63 KOG0376 Serine-threonine phosp 97.5 8.4E-06 1.8E-10 80.4 -3.6 238 24-269 13-299 (476)
64 PHA02546 47 endonuclease subun 97.4 0.00033 7.2E-09 67.7 6.7 59 65-123 26-89 (340)
65 cd07401 MPP_TMEM62_N Homo sapi 97.4 0.0026 5.7E-08 58.9 12.4 28 227-254 190-217 (256)
66 COG2908 Uncharacterized protei 97.3 0.0016 3.4E-08 59.5 9.8 197 56-285 2-229 (237)
67 cd07402 MPP_GpdQ Enterobacter 97.3 0.00065 1.4E-08 61.5 7.3 66 56-123 4-83 (240)
68 TIGR00024 SbcD_rel_arch putati 97.3 0.00077 1.7E-08 61.5 7.3 71 53-124 16-103 (225)
69 PRK10966 exonuclease subunit S 97.2 0.00084 1.8E-08 66.5 6.6 55 68-123 29-87 (407)
70 cd07390 MPP_AQ1575 Aquifex aeo 97.1 0.00077 1.7E-08 58.4 5.5 44 77-125 41-84 (168)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.1 0.001 2.2E-08 59.2 6.3 60 66-125 29-91 (223)
72 cd07398 MPP_YbbF-LpxH Escheric 97.0 0.0012 2.6E-08 58.8 5.8 29 223-251 177-205 (217)
73 PF14582 Metallophos_3: Metall 97.0 0.0025 5.5E-08 57.8 7.3 204 55-282 9-247 (255)
74 cd07393 MPP_DR1119 Deinococcus 97.0 0.0019 4.1E-08 59.0 6.7 45 77-123 40-84 (232)
75 COG1409 Icc Predicted phosphoh 96.9 0.0035 7.6E-08 57.8 7.7 69 56-126 5-81 (301)
76 COG1408 Predicted phosphohydro 96.8 0.0072 1.6E-07 57.1 9.5 67 57-125 50-120 (284)
77 TIGR00583 mre11 DNA repair pro 96.8 0.0037 8.1E-08 61.9 7.7 61 64-124 28-124 (405)
78 cd07380 MPP_CWF19_N Schizosacc 96.8 0.0071 1.5E-07 51.8 8.4 118 56-246 2-121 (150)
79 cd07386 MPP_DNA_pol_II_small_a 96.8 0.0019 4.1E-08 59.2 4.9 68 55-124 2-95 (243)
80 cd07384 MPP_Cdc1_like Saccharo 96.7 0.0033 7.1E-08 54.8 5.8 48 77-124 44-101 (171)
81 cd00844 MPP_Dbr1_N Dbr1 RNA la 96.6 0.0044 9.4E-08 57.9 6.0 68 56-123 2-86 (262)
82 cd08166 MPP_Cdc1_like_1 unchar 96.6 0.0042 9.1E-08 55.4 5.6 46 78-123 42-93 (195)
83 cd08163 MPP_Cdc1 Saccharomyces 96.5 0.051 1.1E-06 50.5 12.9 24 222-245 203-226 (257)
84 cd00839 MPP_PAPs purple acid p 96.0 0.02 4.3E-07 53.5 7.1 66 56-125 9-83 (294)
85 cd08164 MPP_Ted1 Saccharomyces 95.8 0.018 3.9E-07 51.3 5.6 65 59-123 24-111 (193)
86 COG1311 HYS2 Archaeal DNA poly 95.8 0.18 3.9E-06 50.5 12.9 205 55-283 229-461 (481)
87 COG0420 SbcD DNA repair exonuc 95.7 0.02 4.3E-07 56.2 6.0 62 64-125 26-90 (390)
88 cd00845 MPP_UshA_N_like Escher 95.1 0.032 6.9E-07 51.1 4.8 62 57-123 6-82 (252)
89 cd00842 MPP_ASMase acid sphing 95.1 0.62 1.3E-05 43.7 13.7 62 65-126 53-125 (296)
90 COG4186 Predicted phosphoester 94.4 0.082 1.8E-06 45.5 5.2 45 77-125 44-88 (186)
91 COG1407 Predicted ICC-like pho 94.0 0.18 3.8E-06 46.3 6.9 51 78-131 63-118 (235)
92 PF08321 PPP5: PPP5 TPR repeat 93.9 0.16 3.5E-06 40.1 5.6 44 1-51 52-95 (95)
93 PLN02533 probable purple acid 93.6 0.097 2.1E-06 52.3 4.8 24 225-248 312-335 (427)
94 cd07410 MPP_CpdB_N Escherichia 92.9 0.13 2.9E-06 47.9 4.4 21 227-247 209-230 (277)
95 KOG3325 Membrane coat complex 92.8 1.2 2.6E-05 38.1 9.4 114 56-252 5-124 (183)
96 KOG3662 Cell division control 92.2 0.26 5.6E-06 48.7 5.5 64 59-122 73-143 (410)
97 cd07408 MPP_SA0022_N Staphyloc 92.0 0.2 4.3E-06 46.3 4.4 62 57-123 6-82 (257)
98 PF06874 FBPase_2: Firmicute f 90.9 0.17 3.7E-06 52.2 2.8 64 223-288 507-580 (640)
99 cd07378 MPP_ACP5 Homo sapiens 90.9 0.52 1.1E-05 43.6 5.9 24 225-248 191-214 (277)
100 cd07412 MPP_YhcR_N Bacillus su 90.6 0.32 6.8E-06 45.9 4.2 62 57-123 6-88 (288)
101 cd07411 MPP_SoxB_N Thermus the 88.6 0.62 1.3E-05 43.2 4.5 51 67-123 38-95 (264)
102 KOG0918 Selenium-binding prote 88.4 0.0076 1.7E-07 58.6 -8.5 193 79-283 48-250 (476)
103 PRK09419 bifunctional 2',3'-cy 85.7 0.98 2.1E-05 50.8 4.7 59 59-122 668-735 (1163)
104 cd07406 MPP_CG11883_N Drosophi 85.3 1.3 2.8E-05 40.9 4.7 56 62-122 21-82 (257)
105 KOG1432 Predicted DNA repair e 84.9 2 4.2E-05 41.6 5.6 47 77-124 99-148 (379)
106 cd07387 MPP_PolD2_C PolD2 (DNA 84.2 34 0.00075 31.8 13.6 48 236-288 204-254 (257)
107 cd07409 MPP_CD73_N CD73 ecto-5 84.0 1.9 4.2E-05 40.4 5.2 25 223-247 193-218 (281)
108 KOG3339 Predicted glycosyltran 83.8 8 0.00017 34.3 8.5 85 80-169 40-140 (211)
109 COG0737 UshA 5'-nucleotidase/2 80.1 2.1 4.6E-05 43.6 4.3 60 59-123 34-115 (517)
110 PF04042 DNA_pol_E_B: DNA poly 78.1 3.3 7.1E-05 36.7 4.4 67 59-125 6-93 (209)
111 cd07407 MPP_YHR202W_N Saccharo 78.0 2.7 5.9E-05 39.6 4.0 37 82-123 54-97 (282)
112 COG3855 Fbp Uncharacterized pr 77.2 1.9 4.1E-05 43.2 2.7 42 79-125 191-232 (648)
113 COG1768 Predicted phosphohydro 75.0 5.4 0.00012 35.4 4.6 85 62-157 28-114 (230)
114 cd08162 MPP_PhoA_N Synechococc 73.6 4.9 0.00011 38.4 4.6 60 59-123 8-91 (313)
115 cd07405 MPP_UshA_N Escherichia 73.3 4.1 8.8E-05 38.3 3.8 15 234-248 208-222 (285)
116 TIGR01390 CycNucDiestase 2',3' 72.1 4.8 0.0001 42.3 4.4 60 59-123 10-99 (626)
117 PRK09420 cpdB bifunctional 2', 69.6 6.2 0.00013 41.7 4.5 60 59-123 33-122 (649)
118 KOG2863 RNA lariat debranching 69.2 13 0.00027 36.5 6.1 70 55-124 3-89 (456)
119 PRK09419 bifunctional 2',3'-cy 68.9 5.6 0.00012 44.8 4.3 23 224-246 256-279 (1163)
120 PF14164 YqzH: YqzH-like prote 68.1 21 0.00045 26.1 5.6 47 1-47 1-47 (64)
121 PRK11907 bifunctional 2',3'-cy 62.9 10 0.00022 41.1 4.7 38 81-123 162-213 (814)
122 KOG2310 DNA repair exonuclease 59.8 26 0.00057 36.0 6.6 43 63-105 37-79 (646)
123 PF02875 Mur_ligase_C: Mur lig 58.8 31 0.00067 26.1 5.6 68 53-120 13-82 (91)
124 TIGR00282 metallophosphoestera 57.5 25 0.00055 32.9 5.8 64 55-123 4-71 (266)
125 TIGR01530 nadN NAD pyrophospha 57.1 17 0.00037 37.5 5.0 39 80-123 51-94 (550)
126 PF13258 DUF4049: Domain of un 55.4 6.8 0.00015 36.1 1.5 60 109-173 126-186 (318)
127 KOG3947 Phosphoesterases [Gene 53.9 15 0.00032 34.7 3.5 60 57-124 67-127 (305)
128 PF06874 FBPase_2: Firmicute f 52.9 22 0.00047 37.2 4.8 39 79-122 185-223 (640)
129 cd07382 MPP_DR1281 Deinococcus 51.0 40 0.00086 31.3 5.9 64 55-123 3-70 (255)
130 PF15007 CEP44: Centrosomal sp 49.9 9.6 0.00021 31.9 1.5 86 59-158 1-88 (131)
131 PRK09558 ushA bifunctional UDP 48.8 18 0.00039 37.3 3.6 18 229-246 236-256 (551)
132 PRK09418 bifunctional 2',3'-cy 48.2 23 0.00051 38.2 4.4 17 231-247 272-289 (780)
133 PTZ00422 glideosome-associated 47.2 34 0.00073 34.0 5.1 22 226-247 239-260 (394)
134 PF12641 Flavodoxin_3: Flavodo 42.6 1.1E+02 0.0023 26.4 6.9 98 59-175 6-116 (160)
135 COG0634 Hpt Hypoxanthine-guani 40.1 2.6E+02 0.0056 24.7 8.8 79 22-103 8-117 (178)
136 KOG2476 Uncharacterized conser 39.5 53 0.0011 33.2 5.0 67 53-120 6-75 (528)
137 KOG1752 Glutaredoxin and relat 39.2 85 0.0018 25.1 5.4 50 34-89 26-78 (104)
138 TIGR01143 murF UDP-N-acetylmur 38.1 1.1E+02 0.0023 30.1 7.2 64 53-116 296-362 (417)
139 KOG1378 Purple acid phosphatas 36.1 42 0.00091 33.8 3.8 34 225-258 322-355 (452)
140 PRK10773 murF UDP-N-acetylmura 33.2 1.2E+02 0.0025 30.4 6.5 65 53-118 325-392 (453)
141 PTZ00235 DNA polymerase epsilo 30.2 2.7E+02 0.0058 26.5 8.0 67 55-121 31-120 (291)
142 PF10083 DUF2321: Uncharacteri 29.9 19 0.00041 30.9 0.2 45 220-270 20-73 (158)
143 TIGR00282 metallophosphoestera 28.7 41 0.00088 31.5 2.2 39 81-123 2-41 (266)
144 smart00854 PGA_cap Bacterial c 28.5 1.1E+02 0.0023 27.7 5.0 38 229-268 199-236 (239)
145 PF09637 Med18: Med18 protein; 26.9 1.3E+02 0.0028 27.8 5.2 39 223-264 139-177 (250)
146 PRK11929 putative bifunctional 26.5 1.9E+02 0.0041 31.9 7.3 68 53-120 834-904 (958)
147 cd07382 MPP_DR1281 Deinococcus 25.2 65 0.0014 29.9 2.9 37 81-118 1-37 (255)
148 PF09949 DUF2183: Uncharacteri 22.0 2.4E+02 0.0052 22.3 5.2 44 64-116 52-95 (100)
149 COG3855 Fbp Uncharacterized pr 21.1 1.3E+02 0.0028 30.7 4.1 55 224-279 515-579 (648)
150 COG1692 Calcineurin-like phosp 20.3 94 0.002 29.0 2.8 38 81-119 2-39 (266)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-81 Score=553.88 Aligned_cols=285 Identities=47% Similarity=0.947 Sum_probs=273.7
Q ss_pred HHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceE
Q 020547 5 VLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYL 83 (325)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~v 83 (325)
+++..|++|.+.+ .+.++++..||.++.++|.+|++++++++|++|+ |||||++||..+|+..|.++..+|+
T Consensus 2 dldr~ie~L~~~~-------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YL 74 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE-------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYL 74 (303)
T ss_pred cHHHHHHHHHhcC-------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceE
Confidence 4677888887654 7889999999999999999999999999999999 9999999999999999999999999
Q ss_pred eeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhc-hHHHHHHHHHhccCCcEEEEcC
Q 020547 84 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDE 162 (325)
Q Consensus 84 fLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPla~~i~~ 162 (325)
|||||||||-+|+|++.+|++||++||+++.+||||||++.++..|||++||.++|+ ..+|+.+.+.|++||++|+|++
T Consensus 75 FLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ 154 (303)
T KOG0372|consen 75 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDG 154 (303)
T ss_pred eecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecC
Confidence 999999999999999999999999999999999999999999999999999999996 5899999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEe
Q 020547 163 KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRA 242 (325)
Q Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRg 242 (325)
++||||||+||.+.+++||+.+.|-.++|..+.++|+|||||.+. .+|+.++||+|+.||.++++.|++.||+++|+|+
T Consensus 155 kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~Ra 233 (303)
T KOG0372|consen 155 KIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRA 233 (303)
T ss_pred cEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHH
Confidence 999999999999999999999999999999999999999999864 7999999999999999999999999999999999
Q ss_pred eeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020547 243 HQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 297 (325)
Q Consensus 243 H~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 297 (325)
||.+.+||++.++++++|||||||||+.++|.||||.++++....|.+|+..+..
T Consensus 234 HQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 234 HQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred HHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 9999999999999999999999999999999999999999999999999876543
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=9.1e-76 Score=554.61 Aligned_cols=299 Identities=75% Similarity=1.370 Sum_probs=283.6
Q ss_pred hhHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCC
Q 020547 3 PAVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRS 80 (325)
Q Consensus 3 ~~~~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~ 80 (325)
+..++.+|+++++.+ ..++....|+++++.+||++|+++|++||+++++++|++|+ |||||+.+|.++|+..++++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 345899999999876 33455678999999999999999999999999999998887 9999999999999999999999
Q ss_pred ceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEE
Q 020547 81 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI 160 (325)
Q Consensus 81 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i 160 (325)
+|||||||||||++++|++.+++++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++||+||++
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEE
Q 020547 161 DEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELIC 240 (325)
Q Consensus 161 ~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iI 240 (325)
++++|||||||+|.+.++++|+.++||.+.++.+++.|+|||||.....+|.+|+||.|++||++++++||++|++++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred EeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCCCCCc
Q 020547 241 RAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFS 301 (325)
Q Consensus 241 RgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~ 301 (325)
||||++++||++.++++|+|||||||||+..+|+||+|.|++++.++|++++|.+.+...+
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~ 308 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGAS 308 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccccccc
Confidence 9999999999999999999999999999999999999999999999999999887754433
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=6.5e-76 Score=557.40 Aligned_cols=293 Identities=70% Similarity=1.251 Sum_probs=280.1
Q ss_pred ChhHHHHHHHHHHhccC---CCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCC-C
Q 020547 2 DPAVLDGVIRRLLEVRG---KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGG-L 76 (325)
Q Consensus 2 ~~~~~~~~i~~l~~~~~---~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g-~ 76 (325)
....+.++|.++++... ....+..++++++.+||..+.++|..+|+++++++|+.|+ |||||+.||.++|+..| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 34567788888887762 1222456999999999999999999999999999999999 99999999999999999 9
Q ss_pred CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhc-hHHHHHHHHHhccCC
Q 020547 77 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLP 155 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 155 (325)
|+..+|||||||||||++|+|++.+|+++|++||+++++||||||++.++..|||++||..+|+ ..+|..++..|+.||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred cEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCC
Q 020547 156 VAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD 235 (325)
Q Consensus 156 la~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~ 235 (325)
++|+++++++|+|||++|.+.++++|+.|.||++.++.++++|++||||.....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020547 236 LELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (325)
Q Consensus 236 ~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 294 (325)
+++||||||++++||+++.+++++||||||+|||++.|.||+|.+++++.++|++++|.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999995
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3.3e-74 Score=540.65 Aligned_cols=289 Identities=81% Similarity=1.446 Sum_probs=276.9
Q ss_pred HHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceE
Q 020547 6 LDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYL 83 (325)
Q Consensus 6 ~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~v 83 (325)
++.+|+++++.+ ...+....|+++++.+||++|+++|++||+++++++|++|+ |||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 678899999866 23456778999999999999999999999999999998877 9999999999999999999999999
Q ss_pred eeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCc
Q 020547 84 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEK 163 (325)
Q Consensus 84 fLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~ 163 (325)
|||||||||++++|++.+++++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEee
Q 020547 164 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 243 (325)
Q Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH 243 (325)
++|||||++|.+.++++|+.++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020547 244 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (325)
Q Consensus 244 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 294 (325)
|++++||++.++++|||||||||||+..+|+||+|.|+++++++|++++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.7e-74 Score=539.96 Aligned_cols=290 Identities=57% Similarity=1.121 Sum_probs=276.1
Q ss_pred hHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCc
Q 020547 4 AVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSN 81 (325)
Q Consensus 4 ~~~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~ 81 (325)
..++.+|.++++.. ...+....++.+++.+||++|+++|++||+++++++|++|+ |||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 45788999999876 33455678999999999999999999999999999998877 99999999999999999999999
Q ss_pred eEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEc
Q 020547 82 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 161 (325)
Q Consensus 82 ~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~ 161 (325)
|||||||||||++|+|++.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|+.+.++|++||++++++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEE
Q 020547 162 EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICR 241 (325)
Q Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIR 241 (325)
++++|||||++|.+.++++++.++||.+.++.+++.|++||||.....+|.+++||.|+.||++++++||++|++++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999999
Q ss_pred eeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEecc
Q 020547 242 AHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 293 (325)
Q Consensus 242 gH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 293 (325)
|||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|++++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999988753
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.2e-73 Score=539.00 Aligned_cols=282 Identities=35% Similarity=0.621 Sum_probs=258.0
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeC----CeEEE-ecCCCHHHHHHHHHhCCC
Q 020547 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKIC-DIHGQYSDLLRLFEYGGL 76 (325)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~----pi~I~-DIHG~~~~L~~il~~~g~ 76 (325)
|.+.++.+|+++++.. .|+++++.+||++|+++|++||++++++. |++|+ |||||+.+|.++|+..|+
T Consensus 3 ~~~~~~~~i~~~~~~~-------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~ 75 (321)
T cd07420 3 TKDHIDALIEAFKEKQ-------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGL 75 (321)
T ss_pred CHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCC
Confidence 5678999999998654 68899999999999999999999999986 67666 999999999999999999
Q ss_pred CC-CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhc---hHHHHHHHHHhc
Q 020547 77 PP-RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN---VRLWKIFTDCFN 152 (325)
Q Consensus 77 ~~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~ 152 (325)
++ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|+
T Consensus 76 ~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~ 155 (321)
T cd07420 76 PSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFS 155 (321)
T ss_pred CCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHH
Confidence 85 46899999999999999999999999999999999999999999999999999999999997 789999999999
Q ss_pred cCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCC-----CCC----------------------chhHHHHhhcCCC
Q 020547 153 CLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTD-----VPE----------------------SGLLCDLLWSDPS 205 (325)
Q Consensus 153 ~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~-----~~~----------------------~~~~~dllWsDP~ 205 (325)
+||+||++++++|||||||+| ..++++|+.++|+.. .|. .+++.|+|||||.
T Consensus 156 ~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~ 234 (321)
T cd07420 156 WLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPK 234 (321)
T ss_pred hCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCc
Confidence 999999999999999999996 578999999987421 111 1578899999999
Q ss_pred CCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcc
Q 020547 206 NDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLM 285 (325)
Q Consensus 206 ~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~ 285 (325)
+....|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|+++++
T Consensus 235 ~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~ 314 (321)
T cd07420 235 AQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314 (321)
T ss_pred cCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCc
Confidence 65555777899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eEEEEe
Q 020547 286 CSFQIL 291 (325)
Q Consensus 286 ~~~~~~ 291 (325)
++|+++
T Consensus 315 ~~f~~~ 320 (321)
T cd07420 315 PHFVQY 320 (321)
T ss_pred eeEEEe
Confidence 888775
No 7
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-75 Score=508.50 Aligned_cols=289 Identities=44% Similarity=0.903 Sum_probs=276.5
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCC
Q 020547 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPR 79 (325)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~ 79 (325)
|.+.++++-|+..-+.+ .|+++++..||+-++++|..|.+++.++.|++|+ |||||+.||.++|+..|--|.
T Consensus 1 m~~~d~d~wi~~vk~ck-------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~ 73 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKCK-------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPD 73 (306)
T ss_pred CCcCCHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCC
Confidence 44556777788876654 8999999999999999999999999999999999 999999999999999999999
Q ss_pred CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhc-hHHHHHHHHHhccCCcEE
Q 020547 80 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAA 158 (325)
Q Consensus 80 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPla~ 158 (325)
.+|||+|||||||-+|+|++.+|+.||.+||.++.+||||||++.+...|||++||+.+|+ ...|+.+.++|+.|+++|
T Consensus 74 tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaA 153 (306)
T KOG0373|consen 74 TNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAA 153 (306)
T ss_pred cceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 589999999999999999
Q ss_pred EEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCce
Q 020547 159 LIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLEL 238 (325)
Q Consensus 159 ~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~ 238 (325)
+|+++++|||||+||++.+++||+-+.|..++|..+.++|++||||+. ++.|.-++||+|+.||.+++++|...|++++
T Consensus 154 iID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~L 232 (306)
T KOG0373|consen 154 IIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNL 232 (306)
T ss_pred HhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHH
Confidence 999999999999999999999999999999999999999999999985 7999999999999999999999999999999
Q ss_pred EEEeeeeeccceEEecCCe-EEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020547 239 ICRAHQVVEDGYEFFANRR-LITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 297 (325)
Q Consensus 239 iIRgH~~~~~G~~~~~~~~-~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 297 (325)
|+|+||.+.+||++++++| ++|||||||||..++|.|+||.++++++.++++|...+..
T Consensus 233 icRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 233 ICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 9999999999999999988 9999999999999999999999999999999999877553
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.9e-73 Score=532.35 Aligned_cols=282 Identities=50% Similarity=0.978 Sum_probs=269.5
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEe
Q 020547 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLF 84 (325)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vf 84 (325)
++.+|+++++.. .++++++.+||++|+++|++||++++++.|++|+ |||||+.+|.++|+..++++.++|||
T Consensus 2 ~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lf 74 (285)
T cd07415 2 LDKWIEQLKKCE-------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLF 74 (285)
T ss_pred HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 677888887643 6899999999999999999999999999998887 99999999999999999999999999
Q ss_pred eCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhch-HHHHHHHHHhccCCcEEEEcCc
Q 020547 85 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALIDEK 163 (325)
Q Consensus 85 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPla~~i~~~ 163 (325)
||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|..+.++|++||++|+++++
T Consensus 75 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~ 154 (285)
T cd07415 75 LGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQ 154 (285)
T ss_pred EeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCe
Confidence 999999999999999999999999999999999999999999999999999999974 8999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEee
Q 020547 164 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 243 (325)
Q Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH 243 (325)
++|||||++|.+.++++|+.++||.+.+..+++.|+|||||.+. .+|.+|+||.|+.||++++++||++|++++|||||
T Consensus 155 i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 233 (285)
T cd07415 155 IFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAH 233 (285)
T ss_pred EEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcC
Confidence 99999999999999999999999999999999999999999864 78999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCC
Q 020547 244 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 295 (325)
Q Consensus 244 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 295 (325)
|++++||++.++++|+|||||||||+..+|+||+|.|+++.+++|.+++|.+
T Consensus 234 e~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 234 QLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999999999999999999999999998753
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.4e-72 Score=530.93 Aligned_cols=284 Identities=45% Similarity=0.926 Sum_probs=269.0
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEe
Q 020547 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLF 84 (325)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vf 84 (325)
++.+|+++.+.. .++++++.+||++|+++|++||+++++++|++|+ |||||+.+|.++|+..+.++.++|||
T Consensus 3 ~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lf 75 (303)
T PTZ00239 3 IDRHIATLLNGG-------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIF 75 (303)
T ss_pred HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEE
Confidence 678888887643 6889999999999999999999999999998887 99999999999999999999999999
Q ss_pred eCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhch-HHHHHHHHHhccCCcEEEEcCc
Q 020547 85 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALIDEK 163 (325)
Q Consensus 85 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPla~~i~~~ 163 (325)
||||||||++++|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.++|++||++|+++++
T Consensus 76 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~ 155 (303)
T PTZ00239 76 IGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQ 155 (303)
T ss_pred eeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCe
Confidence 999999999999999999999999999999999999999999999999999999974 7999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEee
Q 020547 164 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 243 (325)
Q Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH 243 (325)
++|||||++|.+.++++|+.+.||.+.|..+.++|+|||||.. ..+|.+|+||.|+.||++++++||++|++++|||||
T Consensus 156 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 234 (303)
T PTZ00239 156 ILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAH 234 (303)
T ss_pred EEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcC
Confidence 9999999999999999999999999999999999999999985 578999999999999999999999999999999999
Q ss_pred eeeccceEEecC-CeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020547 244 QVVEDGYEFFAN-RRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 297 (325)
Q Consensus 244 ~~~~~G~~~~~~-~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 297 (325)
|++++||++.++ ++|+|||||||||+..+|+||+|.+++++.+.|.+++|.+++
T Consensus 235 e~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 235 QLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred hhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 999999998765 459999999999999999999999999999999999998764
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.3e-71 Score=515.25 Aligned_cols=269 Identities=58% Similarity=1.068 Sum_probs=260.3
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHH
Q 020547 26 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLA 104 (325)
Q Consensus 26 l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 104 (325)
++++++.+||++|+++|++||++++++.|++|+ |||||+.+|.++|+..+.++.++|||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 467899999999999999999999999998887 9999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcC
Q 020547 105 YKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSL 184 (325)
Q Consensus 105 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i 184 (325)
+|+.+|.++++||||||.+.++..|||..++..+|+.++|+.+.++|++||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeC
Q 020547 185 PRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 264 (325)
Q Consensus 185 ~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa 264 (325)
+||.+.+..++++|+|||||.....+|.+|+||.|+.||++++++||++|++++||||||++++||++.++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020547 265 PNYCGEFDNAGAMMSVDETLMCSFQILKPA 294 (325)
Q Consensus 265 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 294 (325)
||||+..+|+||++.++++.++++.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998999999999999999999998864
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=7e-71 Score=521.07 Aligned_cols=284 Identities=43% Similarity=0.827 Sum_probs=264.9
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEe
Q 020547 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLF 84 (325)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vf 84 (325)
++.+++.+.+.. .|+++++.+||++|+++|++||+++++++|++|+ |||||+.+|.++|+..+.++.++|||
T Consensus 3 ~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylF 75 (305)
T cd07416 3 IDVLKAHFMREG-------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLF 75 (305)
T ss_pred HHHHHHHHHcCC-------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEE
Confidence 455667776443 5889999999999999999999999999998887 99999999999999999999999999
Q ss_pred eCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcE
Q 020547 85 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKI 164 (325)
Q Consensus 85 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~i 164 (325)
||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..++..+|+.++|..+.++|++||+++++++++
T Consensus 76 LGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i 155 (305)
T cd07416 76 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQF 155 (305)
T ss_pred ECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCC------CcccC-CCCCeeecChHHHHHHHHhCCCc
Q 020547 165 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIK------GWEAN-DRGVSYVFGADRVTEFLQKHDLE 237 (325)
Q Consensus 165 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~------~~~~~-~rg~g~~fg~~~~~~fl~~~~~~ 237 (325)
+|||||++|.+.++++|++++||.+.|..++++|+|||||..... +|.+| +||.|+.||++++++||++|+++
T Consensus 156 ~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~ 235 (305)
T cd07416 156 LCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLL 235 (305)
T ss_pred EEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCe
Confidence 999999999999999999999999999999999999999975432 47765 89999999999999999999999
Q ss_pred eEEEeeeeeccceEEecCC------eEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020547 238 LICRAHQVVEDGYEFFANR------RLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 297 (325)
Q Consensus 238 ~iIRgH~~~~~G~~~~~~~------~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 297 (325)
+||||||++++||++++++ +|||||||||||+..+|+||+|.++++. ..|+++.+.++.
T Consensus 236 ~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 236 SIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred EEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 9999999999999998876 8999999999999999999999999985 689999988764
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.8e-71 Score=523.58 Aligned_cols=288 Identities=41% Similarity=0.779 Sum_probs=268.9
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCC----eEEE-ecCCCHHHHHHHHHhCCC
Q 020547 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAP----IKIC-DIHGQYSDLLRLFEYGGL 76 (325)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~p----i~I~-DIHG~~~~L~~il~~~g~ 76 (325)
+.+.++.+++++...+ .|+++++.+||++|.++|++||++++++.| +.|+ |||||+.+|.++|+..|+
T Consensus 12 ~~~~~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~ 84 (316)
T cd07417 12 TLEFVKEMIEWFKDQK-------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGL 84 (316)
T ss_pred CHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCC
Confidence 5677888888887643 688999999999999999999999999877 5555 999999999999999998
Q ss_pred CCC-CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCC
Q 020547 77 PPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP 155 (325)
Q Consensus 77 ~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 155 (325)
++. ++|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++||
T Consensus 85 ~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LP 164 (316)
T cd07417 85 PSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLP 164 (316)
T ss_pred CCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhch
Confidence 765 5799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCcEEEecCCC-CCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhC
Q 020547 156 VAALIDEKILCMHGGL-SPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKH 234 (325)
Q Consensus 156 la~~i~~~il~vHgGi-~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~ 234 (325)
++++++++++|||||+ +|...+++++++++||.+.+..++++|+|||||.+. .+|.+|+||.|+.||++++++||++|
T Consensus 165 laaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n 243 (316)
T cd07417 165 LAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEEN 243 (316)
T ss_pred HhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHc
Confidence 9999999999999999 567889999999999998888999999999999864 68999999999999999999999999
Q ss_pred CCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcC-CcceEEEEeccCCCC
Q 020547 235 DLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDE-TLMCSFQILKPADKK 297 (325)
Q Consensus 235 ~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~ 297 (325)
++++||||||++++||++.++++|+|||||||||+..+|+||+|.|++ +++++|+++++.++.
T Consensus 244 ~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 244 NLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred CCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999999999999 889999999887554
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.4e-69 Score=514.05 Aligned_cols=285 Identities=47% Similarity=0.875 Sum_probs=263.2
Q ss_pred HHHHHHhcc-CCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCC-----
Q 020547 9 VIRRLLEVR-GKP--GKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPR----- 79 (325)
Q Consensus 9 ~i~~l~~~~-~~~--~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~----- 79 (325)
+|.+++++. +.+ ..+..|+++++.+||++|+++|++||+++++++|+.|+ |||||+++|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 477888887 322 45788999999999999999999999999999998877 999999999999999998754
Q ss_pred ---CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhch------HHHHHHHHH
Q 020547 80 ---SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV------RLWKIFTDC 150 (325)
Q Consensus 80 ---~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 150 (325)
.+|||||||||||++|+|++.+++++++.+|.++++||||||.+.++..|||..++..+++. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999988864 689999999
Q ss_pred hccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCC-CCCCchhHHHHhhcCCCCC--CCCcccCC---CCCe--eec
Q 020547 151 FNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPT-DVPESGLLCDLLWSDPSND--IKGWEAND---RGVS--YVF 222 (325)
Q Consensus 151 f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~-~~~~~~~~~dllWsDP~~~--~~~~~~~~---rg~g--~~f 222 (325)
|+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|++||||... ..+|.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4456788999999999864 35777776 9988 799
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEecc
Q 020547 223 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 293 (325)
Q Consensus 223 g~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 293 (325)
|++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||++.+++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=9.4e-67 Score=500.97 Aligned_cols=297 Identities=34% Similarity=0.614 Sum_probs=257.0
Q ss_pred ChhHHHHHHHHHHhccC---CCCccccCCHHHHHHHHHHHHHHHhhCCCeeEee----CCeEEE-ecCCCHHHHHHHHHh
Q 020547 2 DPAVLDGVIRRLLEVRG---KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIE----APIKIC-DIHGQYSDLLRLFEY 73 (325)
Q Consensus 2 ~~~~~~~~i~~l~~~~~---~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~----~pi~I~-DIHG~~~~L~~il~~ 73 (325)
|.+.+++||+++..... .......++.+++.+||++|+++|++||++++++ .|++|+ |||||+.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 56788999998865421 1222356889999999999999999999999998 677777 999999999999999
Q ss_pred CCCCCC-CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhch---HHHHHHHH
Q 020547 74 GGLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV---RLWKIFTD 149 (325)
Q Consensus 74 ~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~ 149 (325)
.|+++. +.|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+++..+|+. .+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 999875 45999999999999999999999999999999999999999999999999999999999964 69999999
Q ss_pred HhccCCcEEEEcCcEEEecCCC---------------------------CCCCCChhhhhcCCCCC-CCCCch---hHHH
Q 020547 150 CFNCLPVAALIDEKILCMHGGL---------------------------SPDLHNLNQIRSLPRPT-DVPESG---LLCD 198 (325)
Q Consensus 150 ~f~~LPla~~i~~~il~vHgGi---------------------------~p~~~~l~~i~~i~rp~-~~~~~~---~~~d 198 (325)
+|++||++++++++++|||||| +|.+.++++|+.++||. +.+..+ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 9999999999999999999999 44567999999999974 555544 5789
Q ss_pred HhhcCCCCCCCCcccC-CCCCeeecChHHHHHHHHhCCCceEEEeeee------------eccceEEecC---CeEEEEe
Q 020547 199 LLWSDPSNDIKGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQV------------VEDGYEFFAN---RRLITIF 262 (325)
Q Consensus 199 llWsDP~~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~------------~~~G~~~~~~---~~~iTif 262 (325)
+|||||... .+|.+| +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|||
T Consensus 248 lLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvF 326 (377)
T cd07418 248 VLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLF 326 (377)
T ss_pred eEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEe
Confidence 999999864 566666 7999999999999999999999999999996 6799999887 8999999
Q ss_pred eCCCCC------CCCCCeEEEEEEcCCc--ceEEEEec---cCCCCCC
Q 020547 263 SAPNYC------GEFDNAGAMMSVDETL--MCSFQILK---PADKKPK 299 (325)
Q Consensus 263 Sa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~---~~~~~~~ 299 (325)
|||||| +.++|+||++.++.+- ..+|.+++ |.++-.|
T Consensus 327 Sa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (377)
T cd07418 327 SAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANP 374 (377)
T ss_pred cCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCc
Confidence 999999 5789999999996543 45555554 4444333
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.9e-67 Score=485.06 Aligned_cols=272 Identities=43% Similarity=0.854 Sum_probs=255.7
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHH
Q 020547 25 QLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLL 103 (325)
Q Consensus 25 ~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~ 103 (325)
.++++..+.|+.+++.+|++|++++++++|++|+ ||||||.||.++|+..|.|.+.+|+|||||||||..|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 5889999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhc
Q 020547 104 AYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRS 183 (325)
Q Consensus 104 ~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~ 183 (325)
+||+.||...++||||||++.+..++.|.+||..+|+.++|+++.+.|+.||+||+.++.++|||||+||++.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHhhcCCCCCC------CCcccC-CCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCC
Q 020547 184 LPRPTDVPESGLLCDLLWSDPSNDI------KGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 256 (325)
Q Consensus 184 i~rp~~~~~~~~~~dllWsDP~~~~------~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~ 256 (325)
+.|..++|..|.+||+|||||.++. +.|.+| .||++|.|...|+++||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998652 345555 699999999999999999999999999999999999987665
Q ss_pred e------EEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020547 257 R------LITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 297 (325)
Q Consensus 257 ~------~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 297 (325)
| +|||||||||.+.++|+||||+.+++.+ .+.+|.-.++.
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVM-NIRQFncSPHP 345 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM-NIRQFNCSPHP 345 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcccc-eeeccCCCCCC
Confidence 4 8999999999999999999999998875 45666554443
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-64 Score=447.50 Aligned_cols=283 Identities=47% Similarity=0.944 Sum_probs=268.6
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEE-ecCCCHHHHHHHHHhCCCCCCCceEe
Q 020547 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKIC-DIHGQYSDLLRLFEYGGLPPRSNYLF 84 (325)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~-DIHG~~~~L~~il~~~g~~~~~~~vf 84 (325)
++.-|++|.+.+ .+++.++..+|+.|+++|.+|.++..+..|++|+ |+||||++|.++|+..|..+...|+|
T Consensus 20 vd~~ie~L~~ck-------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylf 92 (319)
T KOG0371|consen 20 VDPWIEQLYKCK-------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLF 92 (319)
T ss_pred cccchHHHHhcC-------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceee
Confidence 344556665554 7888999999999999999999999999999999 99999999999999999999999999
Q ss_pred eCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHh-chHHHHHHHHHhccCCcEEEEcCc
Q 020547 85 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDEK 163 (325)
Q Consensus 85 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPla~~i~~~ 163 (325)
+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++| ...+|..|.+.|+++|++|.|+++
T Consensus 93 mGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ 172 (319)
T KOG0371|consen 93 MGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESK 172 (319)
T ss_pred eeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999 468999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEee
Q 020547 164 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 243 (325)
Q Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH 243 (325)
++|.|||++|.+.+++.++.+.|-.++|.++.++|+|||||.. .-+|..++||.|+.||.+..++|-.+||+++|-|+|
T Consensus 173 ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRah 251 (319)
T KOG0371|consen 173 IFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAH 251 (319)
T ss_pred eeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHH
Confidence 9999999999999999999999988999999999999999984 578999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCC
Q 020547 244 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 296 (325)
Q Consensus 244 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 296 (325)
|.+.+||.+.+...++|||||||||...+|.+|++.++++....|.+|+|.+.
T Consensus 252 qlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~ 304 (319)
T KOG0371|consen 252 QLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPR 304 (319)
T ss_pred HHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcc
Confidence 99999999999999999999999999999999999999999999999999543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-57 Score=427.60 Aligned_cols=267 Identities=35% Similarity=0.640 Sum_probs=243.7
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeEeeC----CeEEE-ecCCCHHHHHHHHHhCCCCCCC-ceEeeCCccCCCCCcHHH
Q 020547 25 QLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKIC-DIHGQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQSLET 98 (325)
Q Consensus 25 ~l~~~~~~~l~~~a~~il~~ep~ll~~~~----pi~I~-DIHG~~~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s~ev 98 (325)
.|++..+..|+.+|+++|++.|++-+|+. .++|+ |+||.++||.-+|-+.|+|+.+ -|||.||+||||.+|+|+
T Consensus 133 ~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEv 212 (631)
T KOG0377|consen 133 RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEV 212 (631)
T ss_pred hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhh
Confidence 78999999999999999999999999863 48898 9999999999999999999865 599999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHh---chHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCC
Q 020547 99 ICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF---NVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL 175 (325)
Q Consensus 99 l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~ 175 (325)
+.+|+++-+.||..+++-|||||...+|..|||..|+..+| +.++.+.+.++|++||++.++++++++||||+| +.
T Consensus 213 LmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiS-d~ 291 (631)
T KOG0377|consen 213 LMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGIS-DS 291 (631)
T ss_pred HHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcc-cc
Confidence 99999999999999999999999999999999999999999 578999999999999999999999999999998 55
Q ss_pred CChhhhhcCCCC---------CCC-------------CCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHh
Q 020547 176 HNLNQIRSLPRP---------TDV-------------PESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQK 233 (325)
Q Consensus 176 ~~l~~i~~i~rp---------~~~-------------~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~ 233 (325)
++++-+.+++|. ++. .++..+.|+|||||.....+|.+.-||.|++||+|++.+||++
T Consensus 292 Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk 371 (631)
T KOG0377|consen 292 TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQK 371 (631)
T ss_pred hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHH
Confidence 777777777652 110 1246789999999997767777678999999999999999999
Q ss_pred CCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCcceEEEEec
Q 020547 234 HDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 292 (325)
Q Consensus 234 ~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 292 (325)
++++++||+|||.++||++.++++|+|||||+||....+|+||++++.+.++..|.+..
T Consensus 372 ~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 372 HRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred hCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999987666554
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.8e-50 Score=390.04 Aligned_cols=281 Identities=42% Similarity=0.822 Sum_probs=259.6
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeEeeCC----eEEE-ecCCCHHHHHHHHHhCCCCCC-CceEeeCCccCCCCCcHH
Q 020547 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIEAP----IKIC-DIHGQYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLE 97 (325)
Q Consensus 24 ~~l~~~~~~~l~~~a~~il~~ep~ll~~~~p----i~I~-DIHG~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~e 97 (325)
..++...+-.|+..+..++++.|++++++.| +.|+ |+||++.++.+++...|.|+. ..|+|.||++|||..+.|
T Consensus 181 ~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e 260 (476)
T KOG0376|consen 181 KKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVE 260 (476)
T ss_pred cccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeeccccee
Confidence 3566777889999999999999999999865 5566 999999999999999999875 569999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCC-CCCC
Q 020547 98 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLS-PDLH 176 (325)
Q Consensus 98 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~-p~~~ 176 (325)
++..+++.|+.+|+++|++|||||+..++..|||.+++..+|..+.+..+.++|..||++..++++++.+|||+. |.-.
T Consensus 261 ~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v 340 (476)
T KOG0376|consen 261 VILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGV 340 (476)
T ss_pred eeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999995 4457
Q ss_pred ChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCC
Q 020547 177 NLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 256 (325)
Q Consensus 177 ~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~ 256 (325)
+++++++|.|+...++.+.+++++||||... .|..++.||.|..||++++++||+.|++++|||||++.+.||++.++|
T Consensus 341 ~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g 419 (476)
T KOG0376|consen 341 TLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSG 419 (476)
T ss_pred cHHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCC
Confidence 8999999999988889999999999999864 889999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeCCCCCCCCCCeEEEEEEc-CCcceEEEEeccCCCC--CCCccCcc
Q 020547 257 RLITIFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPADKK--PKFSFGST 305 (325)
Q Consensus 257 ~~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~--~~~~~~~~ 305 (325)
+|+|||||||||+..+|.||++.++ ++++..+..|+++++. .++.++++
T Consensus 420 ~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma~~ns 471 (476)
T KOG0376|consen 420 KLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMAYANS 471 (476)
T ss_pred cEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCcccccc
Confidence 9999999999999999999999998 7788999999987765 34444444
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=8.6e-36 Score=269.18 Aligned_cols=214 Identities=52% Similarity=0.828 Sum_probs=176.8
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHH
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 134 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e 134 (325)
++|+||||++++|.++++..+..+.+.+||||||||||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 367799999999999999999988999999999999999999999999998876 8899999999999888766655433
Q ss_pred H---------HHHhchHHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCC
Q 020547 135 C---------KRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDP 204 (325)
Q Consensus 135 ~---------~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP 204 (325)
. .......++..+..++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345678888999999999999887 99999999999876555543 2334456789999999
Q ss_pred CCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEE
Q 020547 205 SNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMS 279 (325)
Q Consensus 205 ~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~ 279 (325)
.........+.|+. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85444344444444 999999999999999999999999999876678899999999999877777777653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=1.2e-25 Score=202.19 Aligned_cols=176 Identities=21% Similarity=0.317 Sum_probs=129.4
Q ss_pred eEEEecCCCHHHHHHHHHhCCC--------CCCCceEeeCCccCCCCCcHHHHHHHHHHHHh---cCCcEEEeCCCcccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGL--------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 123 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~---~p~~v~llrGNHE~~ 123 (325)
++|+|||||+++|.++|+.+++ .+.+.+||+||+||||+++.+++.++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 4677999999999999999875 35678999999999999999999999999754 457899999999999
Q ss_pred ccccccCchH--HHHHHhc-----hHH---HHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCc
Q 020547 124 SVNRVYGFYD--ECKRRFN-----VRL---WKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPES 193 (325)
Q Consensus 124 ~~~~~~gf~~--e~~~~~~-----~~~---~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~ 193 (325)
.++..+.+.. ....... ... ...+.+|++.+|+...++ +++|||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH-------------------
Confidence 8875443321 1111000 111 134578999999998876 799999999321
Q ss_pred hhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCC
Q 020547 194 GLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAP 265 (325)
Q Consensus 194 ~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~ 265 (325)
+.-.|..+.. +.+ =++..++++++.++.++||+||++++.|....+++++|+|.++.
T Consensus 141 ---w~r~y~~~~~-------~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 141 ---WYRGYSKETS-------DKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ---HhhHhhhhhh-------hcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 1111111110 000 01256889999999999999999999887668899999999843
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.92 E-value=3.6e-24 Score=197.22 Aligned_cols=119 Identities=24% Similarity=0.384 Sum_probs=92.7
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC---------CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP---------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
.+|+|||||++.|.++|+++++. ..+++|||||||||||+|.+|+.+++++. .+.++++||||||.+.+
T Consensus 4 ~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~l 81 (245)
T PRK13625 4 DIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKLY 81 (245)
T ss_pred EEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHHH
Confidence 45669999999999999998873 46789999999999999999999998884 45689999999998766
Q ss_pred ccccCc-------hHHHHHHh-------chHHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCCC
Q 020547 126 NRVYGF-------YDECKRRF-------NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDL 175 (325)
Q Consensus 126 ~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~~ 175 (325)
+...+- ..+....| ...+.+.+.++++++|++..++ ++++|||||+.|..
T Consensus 82 ~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 82 RFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 532210 11111222 1246678889999999998774 57999999998763
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.90 E-value=6.1e-23 Score=186.43 Aligned_cols=115 Identities=23% Similarity=0.326 Sum_probs=90.0
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC--------CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP--------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVN 126 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~ 126 (325)
++|+|||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++. .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 46779999999999999998774 46789999999999999999999999885 345899999999988764
Q ss_pred cccC------------ch-----HHHHHHhc--hHHHHHHHHHhccCCcEEEEcCcEEEecCCCC
Q 020547 127 RVYG------------FY-----DECKRRFN--VRLWKIFTDCFNCLPVAALIDEKILCMHGGLS 172 (325)
Q Consensus 127 ~~~g------------f~-----~e~~~~~~--~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~ 172 (325)
...+ .. .+..+.+. .+.++.+.+||++||++... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 2211 00 11122221 34567888999999999775 58999999986
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.89 E-value=2.3e-22 Score=187.79 Aligned_cols=215 Identities=17% Similarity=0.288 Sum_probs=139.2
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchH
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYD 133 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (325)
++|+|||||+++|.++++++++. ..+.++|+||+|||||+|.+|+.++.++ +.++++|+||||.+.+...+|...
T Consensus 4 ~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~~~ 79 (275)
T PRK00166 4 YAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGIKR 79 (275)
T ss_pred EEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCCcc
Confidence 56669999999999999998874 5688999999999999999999999876 457999999999987765555421
Q ss_pred -----HHHHHhchHHHHHHHHHhccCCcEEEE-cCcEEEecCCCCCCCCChhhhh----cCCCCCCCCCc-hhHHHHhhc
Q 020547 134 -----ECKRRFNVRLWKIFTDCFNCLPVAALI-DEKILCMHGGLSPDLHNLNQIR----SLPRPTDVPES-GLLCDLLWS 202 (325)
Q Consensus 134 -----e~~~~~~~~~~~~~~~~f~~LPla~~i-~~~il~vHgGi~p~~~~l~~i~----~i~rp~~~~~~-~~~~dllWs 202 (325)
...........+.+.+|++++|+...+ +.++++||||++|.+. +++.. .++..+.-++. ..+..+.|+
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~-~~~~~~~a~eve~~l~~~~~~~~~~~my~~ 158 (275)
T PRK00166 80 NKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD-LATALALAREVEAVLRSDDYRDFLANMYGN 158 (275)
T ss_pred ccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC-HHHHHHHHHHHHHHhcCCcHHHHHHHhcCC
Confidence 111112234456688999999998776 5589999999999873 22211 11111112222 355555565
Q ss_pred CCCCCCCCcccCCCCCe-eecChHHHH--HHHHhC-----------------------------CCceEEEeeeeeccce
Q 020547 203 DPSNDIKGWEANDRGVS-YVFGADRVT--EFLQKH-----------------------------DLELICRAHQVVEDGY 250 (325)
Q Consensus 203 DP~~~~~~~~~~~rg~g-~~fg~~~~~--~fl~~~-----------------------------~~~~iIRgH~~~~~G~ 250 (325)
.|.. |.++-.|.. ..|--.++. +||... .-..||-||.+...|.
T Consensus 159 ~p~~----W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G~ 234 (275)
T PRK00166 159 EPDR----WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEGL 234 (275)
T ss_pred CcCc----cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCCc
Confidence 5642 333332211 111111111 122222 2347999999987787
Q ss_pred EEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCCc
Q 020547 251 EFFANRRLITIFSAPNYCGEFDNAGAMMSVDETL 284 (325)
Q Consensus 251 ~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~ 284 (325)
.. ...++.+-+.--+ ++.=..+.+++.-
T Consensus 235 ~~--~~~~~~LDtGcvw----gg~Lta~~l~~~~ 262 (275)
T PRK00166 235 TT--PPNIIALDTGCVW----GGKLTALRLEDKQ 262 (275)
T ss_pred cC--CCCeEEeeccccc----CCeEEEEEeCCCc
Confidence 65 4567888877544 2344556776543
No 24
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.89 E-value=6.4e-23 Score=189.76 Aligned_cols=118 Identities=26% Similarity=0.383 Sum_probs=96.5
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchH
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYD 133 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (325)
++|+|||||+++|+++|+++++. +.+.++|+||||||||+|.||+.++++++ .++++|+||||.+.+...+|...
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~~ 77 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIKK 77 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCccc
Confidence 56779999999999999999875 57899999999999999999999999885 57999999999988776555421
Q ss_pred -----HHHHHhchHHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCC
Q 020547 134 -----ECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLH 176 (325)
Q Consensus 134 -----e~~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~ 176 (325)
.....+.....+.+.+|++++|++..+++ ++++||||++|.+.
T Consensus 78 ~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 78 PKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred cccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 11112233345678899999999988765 79999999999873
No 25
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.88 E-value=7.1e-22 Score=180.63 Aligned_cols=118 Identities=25% Similarity=0.479 Sum_probs=92.5
Q ss_pred CeEEE-ecCCCHHHHHHHHHhCCCCC----------CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccc
Q 020547 54 PIKIC-DIHGQYSDLLRLFEYGGLPP----------RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 122 (325)
Q Consensus 54 pi~I~-DIHG~~~~L~~il~~~g~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 122 (325)
+++|+ |||||+.+|.++|+++++.+ .+++||||||||||++|.||+.+|++++. +.++++||||||.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE~ 79 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHDN 79 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcHH
Confidence 45555 99999999999999997753 46899999999999999999999998863 3579999999998
Q ss_pred ccccccc--------CchHHHHHHh---chHHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCC
Q 020547 123 ASVNRVY--------GFYDECKRRF---NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPD 174 (325)
Q Consensus 123 ~~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~ 174 (325)
+.++... |+.. ....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 80 ~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 80 KLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 7665322 2221 11222 2456778889999999998775 4799999998864
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.87 E-value=3.4e-22 Score=185.77 Aligned_cols=121 Identities=23% Similarity=0.350 Sum_probs=98.8
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCc--
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF-- 131 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf-- 131 (325)
++|+|||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++. .++++|+||||.+.+...+|+
T Consensus 4 YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~~~ 79 (279)
T TIGR00668 4 YLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGISR 79 (279)
T ss_pred EEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCCCc
Confidence 56779999999999999999875 46889999999999999999999998773 468899999999888776665
Q ss_pred ---hHHHHHHhchHHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCCCCChhh
Q 020547 132 ---YDECKRRFNVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDLHNLNQ 180 (325)
Q Consensus 132 ---~~e~~~~~~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~~~~l~~ 180 (325)
.+.....+.....+.+.+|++++|+....+ .++++||||++|.+. +++
T Consensus 80 ~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~-l~~ 131 (279)
T TIGR00668 80 NKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD-LQT 131 (279)
T ss_pred cCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc-HHH
Confidence 223333344566788899999999987654 369999999999873 443
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.85 E-value=2.2e-21 Score=175.70 Aligned_cols=112 Identities=24% Similarity=0.289 Sum_probs=84.0
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchH
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYD 133 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (325)
++|+|||||+++|.++|+.+++. ..++++||||+|||||+|.+|++++.+. +++.|+||||.+.++...+-..
T Consensus 20 ~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~~~~ 93 (218)
T PRK11439 20 WLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALASQQM 93 (218)
T ss_pred EEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHCCcc
Confidence 44559999999999999999876 5788999999999999999999998642 5889999999887753221100
Q ss_pred --------HHHHHh---chHHHHHHHHHhccCCcEEEEc---CcEEEecCCCC
Q 020547 134 --------ECKRRF---NVRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 172 (325)
Q Consensus 134 --------e~~~~~---~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~ 172 (325)
+....+ ..+.+..+.+++++||+...+. +++++||||++
T Consensus 94 ~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 94 SLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred chhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 000111 1234556678999999987653 46999999984
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.84 E-value=2.7e-20 Score=167.09 Aligned_cols=166 Identities=23% Similarity=0.316 Sum_probs=110.8
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCc--
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF-- 131 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf-- 131 (325)
++|+|||||+.+|.++++..++. ..+.++|+||+||||+++.+++.++.. .++++++||||.+.+....+.
T Consensus 4 ~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~~~ 77 (207)
T cd07424 4 FVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAEPL 77 (207)
T ss_pred EEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCCCc
Confidence 34559999999999999998874 468899999999999999999988864 369999999999887654331
Q ss_pred hHHHHHHh---------chHHHHHHHHHhccCCcEEEEc---CcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHH
Q 020547 132 YDECKRRF---------NVRLWKIFTDCFNCLPVAALID---EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDL 199 (325)
Q Consensus 132 ~~e~~~~~---------~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dl 199 (325)
..+..... ..+.++.+.+|+++||+...++ .++++||||+++... ...+.. +........++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~~~~ 151 (207)
T cd07424 78 DAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDIEEL 151 (207)
T ss_pred chhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccceee
Confidence 11221111 1225566788999999998765 368999999865431 111100 01122234568
Q ss_pred hhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020547 200 LWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 251 (325)
Q Consensus 200 lWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 251 (325)
+|+++..... . +...-+.+.||.||++.+..+.
T Consensus 152 ~w~~~~~~~~-~------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 152 LWSRTRIQKA-Q------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeccchhhhc-C------------------ccccCCCCEEEECCCCCCcceE
Confidence 8876642100 0 0001145789999999875443
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.84 E-value=2.9e-20 Score=173.34 Aligned_cols=186 Identities=20% Similarity=0.255 Sum_probs=120.8
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC------CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCC-cEEEeCCCcccccccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASVNR 127 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~~~~ 127 (325)
++|+||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+.+..
T Consensus 5 yaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~f 84 (304)
T cd07421 5 ICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAAF 84 (304)
T ss_pred EEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHhH
Confidence 45559999999999999865421 2457999999999999999999999999888876 6899999999654331
Q ss_pred ccC---------ch------------------------------------------------------HHHHHHhc----
Q 020547 128 VYG---------FY------------------------------------------------------DECKRRFN---- 140 (325)
Q Consensus 128 ~~g---------f~------------------------------------------------------~e~~~~~~---- 140 (325)
... |. .+....|+
T Consensus 85 L~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~~~ 164 (304)
T cd07421 85 LGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPHG 164 (304)
T ss_pred hhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCCcc
Confidence 110 00 01112222
Q ss_pred -----hHHHHHHHHHhccCCcEEEEcCcE-------------EEecCCCCCCCCChhhhhcCC-CCCCCCCchhHHHHhh
Q 020547 141 -----VRLWKIFTDCFNCLPVAALIDEKI-------------LCMHGGLSPDLHNLNQIRSLP-RPTDVPESGLLCDLLW 201 (325)
Q Consensus 141 -----~~~~~~~~~~f~~LPla~~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-rp~~~~~~~~~~dllW 201 (325)
..+-+...+|++.||+....+ ++ +|||||+.|...--+|.+.+. +-...|. .+++|
T Consensus 165 ~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~l~ 239 (304)
T cd07421 165 SSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAPLS 239 (304)
T ss_pred hHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccccc
Confidence 123455679999999987644 55 999999999987667766543 2122222 26777
Q ss_pred cCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCC
Q 020547 202 SDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCG 269 (325)
Q Consensus 202 sDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~ 269 (325)
....- -..++.. ...-.+||-||.. +....+.=|.|-+...|.+
T Consensus 240 ~R~~f-----~~~~~~~--------------~~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 240 GRKNV-----WNIPQEL--------------ADKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred cchhh-----hcCcccc--------------cCCCeEEEECCCC-----CceecCCEEEEECCCCcCC
Confidence 65541 1111110 0012578889992 2333444566777776644
No 30
>PHA02239 putative protein phosphatase
Probab=99.84 E-value=1.9e-20 Score=171.41 Aligned_cols=169 Identities=22% Similarity=0.292 Sum_probs=114.7
Q ss_pred eEEEecCCCHHHHHHHHHhCCCC--CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccC--
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLP--PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG-- 130 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g-- 130 (325)
++|+||||++..|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+.+....+
T Consensus 4 ~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~~~~ 82 (235)
T PHA02239 4 YVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIMENVD 82 (235)
T ss_pred EEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHhCch
Confidence 56679999999999999987533 46889999999999999999999998875 34568999999999875432110
Q ss_pred ---ch---------HHHHHHhc-------------------------------hHHHHHHHHHhccCCcEEEEcCcEEEe
Q 020547 131 ---FY---------DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALIDEKILCM 167 (325)
Q Consensus 131 ---f~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPla~~i~~~il~v 167 (325)
.. .+....|+ ...+..+..|+++||+.... ++++||
T Consensus 83 ~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ifV 161 (235)
T PHA02239 83 RLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKYIFS 161 (235)
T ss_pred hcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCEEEE
Confidence 00 01112221 11334556789999999775 489999
Q ss_pred cCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeec
Q 020547 168 HGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVE 247 (325)
Q Consensus 168 HgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~ 247 (325)
|||+.|... +++ ....+++|.+. . .+.. .-+.||-||+++.
T Consensus 162 HAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp~~ 202 (235)
T PHA02239 162 HSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTPTD 202 (235)
T ss_pred eCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCCCCC
Confidence 999988743 222 12368899765 1 1111 1247899999987
Q ss_pred cceEEecCCeEEEEeeCC
Q 020547 248 DGYEFFANRRLITIFSAP 265 (325)
Q Consensus 248 ~G~~~~~~~~~iTifSa~ 265 (325)
++..... ++.|.|-...
T Consensus 203 ~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 203 SGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCccccc-CCEEEeecCc
Confidence 6543322 3456676654
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.78 E-value=5.5e-19 Score=160.07 Aligned_cols=113 Identities=25% Similarity=0.277 Sum_probs=82.1
Q ss_pred CeEEE-ecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCc
Q 020547 54 PIKIC-DIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 131 (325)
Q Consensus 54 pi~I~-DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf 131 (325)
++.|+ |||||+++|+++++.+.+. ..+.++|+||||||||+|.+++.++.+ .+++.||||||.+.+....+-
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~ 89 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETG 89 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcC
Confidence 45555 9999999999999998754 568899999999999999999998853 368999999998877532110
Q ss_pred h-H-------HHHHHhch---HHHHHHHHHhccCCcEEEEc---CcEEEecCCCC
Q 020547 132 Y-D-------ECKRRFNV---RLWKIFTDCFNCLPVAALID---EKILCMHGGLS 172 (325)
Q Consensus 132 ~-~-------e~~~~~~~---~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~ 172 (325)
. . +....+.. ........++++||+...+. .++++||||++
T Consensus 90 ~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 90 DGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred ChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 0 0 00011111 22334456899999997664 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.33 E-value=1.6e-11 Score=101.82 Aligned_cols=156 Identities=24% Similarity=0.285 Sum_probs=98.6
Q ss_pred eEEEecCCCHHHH----HHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHH--HHHHHhcCCcEEEeCCCccccccccc
Q 020547 55 IKICDIHGQYSDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASVNRV 128 (325)
Q Consensus 55 i~I~DIHG~~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll--~~lk~~~p~~v~llrGNHE~~~~~~~ 128 (325)
++|+|+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||.......
T Consensus 4 ~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~~ 83 (200)
T PF00149_consen 4 LVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNSF 83 (200)
T ss_dssp EEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHHH
T ss_pred EEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceeccc
Confidence 3455999999987 34444444456678999999999999888776654 44555677789999999997765432
Q ss_pred cCchHHHH----------------------------------HHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCC
Q 020547 129 YGFYDECK----------------------------------RRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPD 174 (325)
Q Consensus 129 ~gf~~e~~----------------------------------~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~ 174 (325)
+....... .............+.............++++|.++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~ 163 (200)
T PF00149_consen 84 YGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSS 163 (200)
T ss_dssp HHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTT
T ss_pred cccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCCCc
Confidence 21111111 00111122222233333333444456799999998765
Q ss_pred CCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeee
Q 020547 175 LHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 246 (325)
Q Consensus 175 ~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~ 246 (325)
...-... .....+.+.+..++++.++++++.||+..
T Consensus 164 ~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 164 SSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp SSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred ccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 4322211 12356778899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.12 E-value=3.1e-09 Score=90.43 Aligned_cols=80 Identities=26% Similarity=0.359 Sum_probs=59.9
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHH
Q 020547 56 KICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDEC 135 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~ 135 (325)
+|+|+||+...+.++++.+.. .+.++++||++++++.+. + .....++.++||||....
T Consensus 4 ~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~---------- 61 (155)
T cd00841 4 VISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD---------- 61 (155)
T ss_pred EEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC----------
Confidence 455999999999999998654 688999999999998765 1 123469999999997532
Q ss_pred HHHhchHHHHHHHHHhccCCcEEEEc---CcEEEecCCCC
Q 020547 136 KRRFNVRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 172 (325)
Q Consensus 136 ~~~~~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~ 172 (325)
+..+|....+. .+++++||...
T Consensus 62 ---------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ---------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ---------------cccCCceEEEEECCEEEEEECCccc
Confidence 35566554433 26999999654
No 34
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.09 E-value=6.1e-09 Score=94.82 Aligned_cols=68 Identities=10% Similarity=0.203 Sum_probs=54.2
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
++++|+||++..+.++++.+.....+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 8 l~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 8 LATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred EEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 4555999999999999987655567889999999999977767766666664 2334699999999975
No 35
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.05 E-value=1.9e-10 Score=95.22 Aligned_cols=143 Identities=41% Similarity=0.673 Sum_probs=116.5
Q ss_pred cccccCchHHHHHHhchH-HHHH---HHHHhccCCcEEEEcC-cEEEecCCCCCCC-CChhhhhcCCCCC--CCCCchhH
Q 020547 125 VNRVYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-HNLNQIRSLPRPT--DVPESGLL 196 (325)
Q Consensus 125 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPla~~i~~-~il~vHgGi~p~~-~~l~~i~~i~rp~--~~~~~~~~ 196 (325)
+...+++.+++...++.. .|.. ..++|+.||+.+..+. ..+|.|++++|.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 344567777766666543 5655 8999999999999888 8999999999976 6777777776655 56667777
Q ss_pred HHHhhcCCCCC-CCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCC
Q 020547 197 CDLLWSDPSND-IKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 268 (325)
Q Consensus 197 ~dllWsDP~~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 268 (325)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+....++...+.+..+|.||+++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 78899999863 678999999998877 788889998888888999999999999888776899999999986
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.98 E-value=9.4e-09 Score=86.71 Aligned_cols=133 Identities=23% Similarity=0.317 Sum_probs=80.9
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHH
Q 020547 56 KICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDEC 135 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~ 135 (325)
+++|+|++...+.++++.+ ...+.++++||++|+ .+++..+... .++.++||||.+.........
T Consensus 5 ~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~--- 69 (156)
T PF12850_consen 5 VISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDEE--- 69 (156)
T ss_dssp EEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECTC---
T ss_pred EEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhcc---
Confidence 4559999999999999987 346788899999993 6666666444 599999999965432211100
Q ss_pred HHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCC
Q 020547 136 KRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEAND 215 (325)
Q Consensus 136 ~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~ 215 (325)
. +.+..... .-..+++++||....
T Consensus 70 -------~------~~~~~~~~-~~~~~i~~~H~~~~~------------------------------------------ 93 (156)
T PF12850_consen 70 -------Y------LLDALRLT-IDGFKILLSHGHPYD------------------------------------------ 93 (156)
T ss_dssp -------S------SHSEEEEE-ETTEEEEEESSTSSS------------------------------------------
T ss_pred -------c------cccceeee-ecCCeEEEECCCCcc------------------------------------------
Confidence 0 11222221 123479999996653
Q ss_pred CCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeC
Q 020547 216 RGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 264 (325)
Q Consensus 216 rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa 264 (325)
...+.+.+.+.+...+.++++.||...+.-.+ ..+..+++.-|.
T Consensus 94 ----~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 94 ----VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp ----STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred ----cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 01334556677778999999999998754433 334344544443
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.93 E-value=7.6e-09 Score=86.36 Aligned_cols=116 Identities=21% Similarity=0.234 Sum_probs=76.0
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcH--HHHHHHHHHHHhcCCcEEEeCCCccccccccccCch
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 132 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 132 (325)
++|+|+||++. .......+.+|++||+++++..+. +.+.++.+++ . ..+++++||||....
T Consensus 3 ~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~------- 65 (135)
T cd07379 3 VCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD------- 65 (135)
T ss_pred EEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-------
Confidence 34559999987 122345678889999999986432 2333333321 1 236789999996421
Q ss_pred HHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcc
Q 020547 133 DECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWE 212 (325)
Q Consensus 133 ~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~ 212 (325)
.-+.+++++||.+.+.. +. .+ +
T Consensus 66 --------------------------~~~~~ilv~H~~p~~~~---~~-------------------~~--~-------- 87 (135)
T cd07379 66 --------------------------PEDTDILVTHGPPYGHL---DL-------------------VS--S-------- 87 (135)
T ss_pred --------------------------CCCCEEEEECCCCCcCc---cc-------------------cc--c--------
Confidence 12447999999542110 00 00 0
Q ss_pred cCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020547 213 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 251 (325)
Q Consensus 213 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 251 (325)
....|...+.+++++.+.++++-||...+.|++
T Consensus 88 ------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 ------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred ------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123677889999999999999999999988887
No 38
>PRK09453 phosphodiesterase; Provisional
Probab=98.92 E-value=4.7e-09 Score=92.19 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=50.6
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCC--------cHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
.+|+|+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ ...+++++||||..
T Consensus 4 ~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 4 MFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred EEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 3455999999999999988755667899999999999873 45566555433 34699999999975
No 39
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.89 E-value=3.9e-08 Score=84.25 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=43.9
Q ss_pred EEEecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 56 KICDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+|+|+||+..++..+++..... ..+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 5 viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 5 VISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred EEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 4459999998877766655544 568899999999 45676666544 23599999999973
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.79 E-value=7.9e-08 Score=77.22 Aligned_cols=117 Identities=27% Similarity=0.363 Sum_probs=83.6
Q ss_pred EEEecCCCHHHHHHHH--HhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchH
Q 020547 56 KICDIHGQYSDLLRLF--EYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYD 133 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il--~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (325)
+++|+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 2 ~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD------------ 69 (131)
T cd00838 2 VISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD------------ 69 (131)
T ss_pred eeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce------------
Confidence 5669999999888765 33334556778899999999988777655433333345668999999999
Q ss_pred HHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCccc
Q 020547 134 ECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEA 213 (325)
Q Consensus 134 e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~ 213 (325)
++++|+.+.+........
T Consensus 70 ------------------------------i~~~H~~~~~~~~~~~~~-------------------------------- 87 (131)
T cd00838 70 ------------------------------ILLTHGPPYDPLDELSPD-------------------------------- 87 (131)
T ss_pred ------------------------------EEEeccCCCCCchhhccc--------------------------------
Confidence 889999876542111000
Q ss_pred CCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEE
Q 020547 214 NDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEF 252 (325)
Q Consensus 214 ~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~ 252 (325)
.......+...+...+.+.+|.||......+..
T Consensus 88 ------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 88 ------EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred ------chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 000566788888999999999999998766543
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.68 E-value=3.1e-07 Score=79.82 Aligned_cols=63 Identities=22% Similarity=0.240 Sum_probs=43.8
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCc-HHHHHHHHHHHHhcCCcEEEeCCCccccc
Q 020547 56 KICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 124 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-~evl~ll~~lk~~~p~~v~llrGNHE~~~ 124 (325)
+++|+||++..+.. ......+.+.+|+.||++++|... .+.+..+ + ..+..+++++||||...
T Consensus 3 ~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l---~-~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 3 AISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLL---L-AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred EEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHH---H-hcCCCEEEEcCCCCCHH
Confidence 45699999998876 323334567899999999998763 2222222 2 23556999999999753
No 42
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.67 E-value=2.1e-07 Score=85.29 Aligned_cols=154 Identities=18% Similarity=0.219 Sum_probs=92.2
Q ss_pred eEEEecCCCHHHHH-HHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccc-----
Q 020547 55 IKICDIHGQYSDLL-RLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRV----- 128 (325)
Q Consensus 55 i~I~DIHG~~~~L~-~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~----- 128 (325)
++|+||||++.... +.++.. ..+.+|++||+++. +.+++..+..+ +..++.++||||.+.....
T Consensus 4 a~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~~ 73 (238)
T cd07397 4 AIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKGD 73 (238)
T ss_pred EEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccchHH
Confidence 34559999987642 333332 35789999999864 46666655443 3459999999997543200
Q ss_pred ---------------cC------------------------c-hHHHHHHhc-hHHHHHHHHHhccCCcEEEEcCcEEEe
Q 020547 129 ---------------YG------------------------F-YDECKRRFN-VRLWKIFTDCFNCLPVAALIDEKILCM 167 (325)
Q Consensus 129 ---------------~g------------------------f-~~e~~~~~~-~~~~~~~~~~f~~LPla~~i~~~il~v 167 (325)
++ + ..+++..|+ ....+++...++.++.+......+++.
T Consensus 74 ~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vlia 153 (238)
T cd07397 74 RVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLA 153 (238)
T ss_pred HHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEEe
Confidence 00 0 124555563 345666777777776443434579999
Q ss_pred cCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCC----CceEEEee
Q 020547 168 HGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD----LELICRAH 243 (325)
Q Consensus 168 HgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----~~~iIRgH 243 (325)
|++++-.. ++.++ |. ...|.+. |..+|...+.+-+++.. .++++-||
T Consensus 154 H~~~~G~g---~~~~~--------------------~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fGH 204 (238)
T cd07397 154 HNGPSGLG---SDAED--------------------PC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFGH 204 (238)
T ss_pred CcCCcCCC---ccccc--------------------cc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeCC
Confidence 99986432 22111 11 1223321 12467777766666544 79999999
Q ss_pred eeec
Q 020547 244 QVVE 247 (325)
Q Consensus 244 ~~~~ 247 (325)
-...
T Consensus 205 ~H~~ 208 (238)
T cd07397 205 MHHR 208 (238)
T ss_pred ccCc
Confidence 7754
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.64 E-value=1.8e-06 Score=75.87 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=39.2
Q ss_pred EEEecC-CCHH-----HHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 56 KICDIH-GQYS-----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 56 ~I~DIH-G~~~-----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+|+|.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||..
T Consensus 4 viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 4 VIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred EEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 455999 6533 35555543 44678999999986 77777665542 2599999999964
No 44
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.54 E-value=8.2e-07 Score=73.89 Aligned_cols=106 Identities=20% Similarity=0.209 Sum_probs=73.8
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHH
Q 020547 56 KICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDEC 135 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~ 135 (325)
+|+|.||..+.+.++... ..+.+.++++||+. .+++..+..+ ....++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D-------------- 56 (129)
T cd07403 2 VISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD-------------- 56 (129)
T ss_pred eeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc--------------
Confidence 566999998877777665 45678899999973 3445555544 1335899999999
Q ss_pred HHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCC
Q 020547 136 KRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEAND 215 (325)
Q Consensus 136 ~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~ 215 (325)
-+++++|+-+.+. .... +
T Consensus 57 --------------------------~~Ilv~H~pp~~~-~~~~------------------~----------------- 74 (129)
T cd07403 57 --------------------------VDILLTHAPPAGI-GDGE------------------D----------------- 74 (129)
T ss_pred --------------------------cCEEEECCCCCcC-cCcc------------------c-----------------
Confidence 3789999832210 0000 0
Q ss_pred CCCeeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020547 216 RGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 251 (325)
Q Consensus 216 rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 251 (325)
...-|..++.+++++.+.++++-||...+..+.
T Consensus 75 ---~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ---FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ---ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356778899999999999999999877765
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.52 E-value=2.1e-07 Score=80.11 Aligned_cols=65 Identities=25% Similarity=0.261 Sum_probs=45.1
Q ss_pred EEEecCCCHHHHHHHH-HhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 56 KICDIHGQYSDLLRLF-EYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il-~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+++|+|++.......+ +.......+.++++||+++++....... ++. ....+..+++++||||..
T Consensus 3 ~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 3 YLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred eEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 3459999988776655 2233445677889999999987665543 222 223456799999999976
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.46 E-value=2e-06 Score=78.39 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=99.3
Q ss_pred eEEEecCCCH------HHHHHHHHhCCCCCCCceEeeCCccCCC-----CC--cHHHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 55 IKICDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 55 i~I~DIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG-----~~--s~evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
+.|+|+|... ..+.+.+.... ...+.++++||++|.. +. ..++..++..|+. .+..+++++||||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCCc
Confidence 4567999542 23444444332 1467888999999952 11 1344555555542 3457999999999
Q ss_pred ccccccccCchHHHHHHhchHHHHHHHHHhccCCcE--EEE-cCcEEEecCCCCCCC-CChhhhhcCCC-CC------CC
Q 020547 122 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVA--ALI-DEKILCMHGGLSPDL-HNLNQIRSLPR-PT------DV 190 (325)
Q Consensus 122 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla--~~i-~~~il~vHgGi~p~~-~~l~~i~~i~r-p~------~~ 190 (325)
...-. .+.+... +..+|-. ..+ +.+++++||-.-..- ....-.+++-| |. ..
T Consensus 80 ~~~~~---------------~~~~~~g--i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l 142 (231)
T TIGR01854 80 FLIGK---------------RFAREAG--MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHL 142 (231)
T ss_pred hhhhH---------------HHHHHCC--CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 64210 0011000 1122222 222 357999999654210 11111112111 10 00
Q ss_pred CC--chhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCC
Q 020547 191 PE--SGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 268 (325)
Q Consensus 191 ~~--~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 268 (325)
|. ...+...+++..... . ....-.-....+.++++.+++.+.+++|.||...+.=+.+..++.-.+-.+-++..
T Consensus 143 ~~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~ 218 (231)
T TIGR01854 143 PLAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY 218 (231)
T ss_pred CHHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc
Confidence 10 112233343322110 0 00000112235677889999999999999999876545443333223445545442
Q ss_pred CCCCCeEEEEEEcCC
Q 020547 269 GEFDNAGAMMSVDET 283 (325)
Q Consensus 269 ~~~~n~ga~l~i~~~ 283 (325)
..+.++.++++
T Consensus 219 ----~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ----RQGSILRVDAD 229 (231)
T ss_pred ----cCCeEEEEcCC
Confidence 23556666654
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.39 E-value=5e-06 Score=69.63 Aligned_cols=102 Identities=21% Similarity=0.244 Sum_probs=66.2
Q ss_pred HHHhCCCCCCCceEeeCCccCCCCCc--HHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHH
Q 020547 70 LFEYGGLPPRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIF 147 (325)
Q Consensus 70 il~~~g~~~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~ 147 (325)
+++.......+.++++||+++.|... .+...++..+.... ..+++++||||.
T Consensus 27 ~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~------------------------- 80 (144)
T cd07400 27 LLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV------------------------- 80 (144)
T ss_pred HHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE-------------------------
Confidence 44444445567899999999998742 12223333332111 269999999997
Q ss_pred HHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHH
Q 020547 148 TDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRV 227 (325)
Q Consensus 148 ~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~ 227 (325)
++++|..+.+.... +... . -+.+++
T Consensus 81 ----------------iv~~Hhp~~~~~~~---------------------------------~~~~-----~-~~~~~~ 105 (144)
T cd07400 81 ----------------IVVLHHPLVPPPGS---------------------------------GRER-----L-LDAGDA 105 (144)
T ss_pred ----------------EEEecCCCCCCCcc---------------------------------cccc-----C-CCHHHH
Confidence 88899866432100 0000 0 156778
Q ss_pred HHHHHhCCCceEEEeeeeeccceEE
Q 020547 228 TEFLQKHDLELICRAHQVVEDGYEF 252 (325)
Q Consensus 228 ~~fl~~~~~~~iIRgH~~~~~G~~~ 252 (325)
.+++++.+.++++.||...+..+.+
T Consensus 106 ~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 106 LKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred HHHHHHcCCCEEEECCCCCcCeeec
Confidence 8899999999999999998765553
No 48
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.36 E-value=3.2e-06 Score=77.60 Aligned_cols=201 Identities=17% Similarity=0.201 Sum_probs=99.5
Q ss_pred eEEEecCCC------HHHHHHHHHhCCCCCCCceEeeCCccCC--C-----CCcHHHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 55 IKICDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 55 i~I~DIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
+.|+|+|.. ...+.+.++.. ....+.++++||++|. | +...+++.++..++. .+..+++++||||
T Consensus 4 ~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GNHD 81 (241)
T PRK05340 4 LFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGNRD 81 (241)
T ss_pred EEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCCCc
Confidence 455699954 22455555432 2345788999999985 2 234566677766653 3346999999999
Q ss_pred ccccccccCchHHHHHHhchHHHHHHHHHhccCC--cEEEEc-CcEEEecCCCCCCCC-ChhhhhcCCC-CC-----CCC
Q 020547 122 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP--VAALID-EKILCMHGGLSPDLH-NLNQIRSLPR-PT-----DVP 191 (325)
Q Consensus 122 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP--la~~i~-~~il~vHgGi~p~~~-~l~~i~~i~r-p~-----~~~ 191 (325)
..... ...+..+ ...+| ....++ .+++++||-.-+.-. ....++++-| |. ..+
T Consensus 82 ~~~~~-------~~~~~~g----------~~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~ 144 (241)
T PRK05340 82 FLLGK-------RFAKAAG----------MTLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLAL 144 (241)
T ss_pred hhhhH-------HHHHhCC----------CEEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 74311 1111111 12222 222333 369999997654211 1111222211 10 000
Q ss_pred CchhHHHHhh--cCCCCCCCCcccCCCCCe--eecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCC
Q 020547 192 ESGLLCDLLW--SDPSNDIKGWEANDRGVS--YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNY 267 (325)
Q Consensus 192 ~~~~~~dllW--sDP~~~~~~~~~~~rg~g--~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y 267 (325)
......++-+ +.-+ -..+.+... ....++++.+.+++.+.+.+|.||...+.=.....++.-++-.+-++.
T Consensus 145 p~~~~~~ia~~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw 219 (241)
T PRK05340 145 PLSIRLRIAAKMRAKS-----KAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW 219 (241)
T ss_pred CHHHHHHHHHHHHHHH-----HHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC
Confidence 0001111100 0000 000011111 223557788899999999999999987654443333322233333333
Q ss_pred CCCCCCeEEEEEEcCC
Q 020547 268 CGEFDNAGAMMSVDET 283 (325)
Q Consensus 268 ~~~~~n~ga~l~i~~~ 283 (325)
. ..+.++.++++
T Consensus 220 ~----~~~~~~~~~~~ 231 (241)
T PRK05340 220 H----EQGSVLKVDAD 231 (241)
T ss_pred C----CCCeEEEEECC
Confidence 1 23777888776
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.35 E-value=3.1e-05 Score=69.88 Aligned_cols=202 Identities=18% Similarity=0.186 Sum_probs=112.6
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCcc--CCCCCcHHHHHH-HHHHHHhcCCcEEEeCCCccccccccccCc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASVNRVYGF 131 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~V--DRG~~s~evl~l-l~~lk~~~p~~v~llrGNHE~~~~~~~~gf 131 (325)
+++.|+||..+.+.+++..+.....+-+|+.||+. +.|+.-...-.. +..++ .....++.++||.|...+-.
T Consensus 7 l~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~---- 81 (226)
T COG2129 7 LAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID---- 81 (226)
T ss_pred EEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH----
Confidence 45559999999999999988777778889999999 888743332221 33333 24457999999998764421
Q ss_pred hHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCC-C-----ChhhhhcCCCCCCCCCchhHHHHhhcCCC
Q 020547 132 YDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL-H-----NLNQIRSLPRPTDVPESGLLCDLLWSDPS 205 (325)
Q Consensus 132 ~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~-~-----~l~~i~~i~rp~~~~~~~~~~dllWsDP~ 205 (325)
. ....+..+ .+-...+++-.+|-=||..|.. . +.++|.+..+..-........=++.--|+
T Consensus 82 --~-l~~~~~~v----------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~HaPP 148 (226)
T COG2129 82 --V-LKNAGVNV----------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLTHAPP 148 (226)
T ss_pred --H-HHhccccc----------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEecCCC
Confidence 0 00011000 0112222322233335554432 1 22333221110000000000000000111
Q ss_pred CCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCC
Q 020547 206 NDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET 283 (325)
Q Consensus 206 ~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~ 283 (325)
... ....+-| -..-|..+++++.++.+-.+.|.||-....|++.-.+ ||+-.|.-.+ .-..|++.++.+
T Consensus 149 ~gt--~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~~~ 217 (226)
T COG2129 149 YGT--LLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELEKE 217 (226)
T ss_pred CCc--cccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEecCc
Confidence 000 0001122 1346899999999999999999999998889887655 8899887644 367788888776
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.31 E-value=4.1e-05 Score=69.10 Aligned_cols=190 Identities=16% Similarity=0.126 Sum_probs=95.8
Q ss_pred EEecCC----CHHHH----HHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHh--cCCcEEEeCCCccccccc
Q 020547 57 ICDIHG----QYSDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK--YPENFFLLRGNHECASVN 126 (325)
Q Consensus 57 I~DIHG----~~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~--~p~~v~llrGNHE~~~~~ 126 (325)
++|+|- ....+ ..+.+.......+.+|++||++|.+....+--.+...++.. .+-.++.++||||... .
T Consensus 6 ~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~~~-~ 84 (214)
T cd07399 6 LPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDLVL-A 84 (214)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcchh-h
Confidence 339984 22223 33444443344577889999999998443222222222222 2345899999999421 1
Q ss_pred cccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCC
Q 020547 127 RVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSN 206 (325)
Q Consensus 127 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~ 206 (325)
..+.. ..+.++.+.+.++..|- ..-++++|--+.+.....+ ...|.+
T Consensus 85 ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~~------------------~~~~~~--- 131 (214)
T cd07399 85 LEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRPD------------------SIDYDS--- 131 (214)
T ss_pred CCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcCc------------------cccccc---
Confidence 11111 23334445555554331 1247788874432110000 000100
Q ss_pred CCCCcccCCCCCeeecChHHHHHHHHhC-CCceEEEeeeeeccceEEe-----cCCeEEEEeeCCCCCCCCCCeE-EEEE
Q 020547 207 DIKGWEANDRGVSYVFGADRVTEFLQKH-DLELICRAHQVVEDGYEFF-----ANRRLITIFSAPNYCGEFDNAG-AMMS 279 (325)
Q Consensus 207 ~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~~~~iIRgH~~~~~G~~~~-----~~~~~iTifSa~~y~~~~~n~g-a~l~ 279 (325)
...-+...+.+.++++ ++++++-||.... +.... .++.+..+.+........+|.. .++.
T Consensus 132 ------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~ 198 (214)
T cd07399 132 ------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLE 198 (214)
T ss_pred ------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEE
Confidence 1123456678889888 7999999998753 33332 1344555554432211111211 3566
Q ss_pred EcCCc-ceEEEEecc
Q 020547 280 VDETL-MCSFQILKP 293 (325)
Q Consensus 280 i~~~~-~~~~~~~~~ 293 (325)
++++. ++.+..+.|
T Consensus 199 f~~~~~~i~~~tysp 213 (214)
T cd07399 199 FDPDNNKIDVRTYSP 213 (214)
T ss_pred EecCCCEEEEEeCCC
Confidence 66663 666666554
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.27 E-value=1.2e-05 Score=73.60 Aligned_cols=65 Identities=22% Similarity=0.130 Sum_probs=44.4
Q ss_pred EEEecCCCH------HHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 56 KICDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 56 ~I~DIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
.|+|+|+++ ..+.++++.+.....+.+|+.||++++.+.+.+.+..+..+ .+..+++++||||..
T Consensus 4 ~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 4 FSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred EEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 345999753 23556666554455778999999999876555555444432 345699999999964
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.20 E-value=7e-05 Score=65.56 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=93.6
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHH
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 134 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e 134 (325)
++|+|.||...+..+..+.....+.+.+|.+||++...... .+.. ....+++.++||.|.....
T Consensus 5 lviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~-------- 68 (172)
T COG0622 5 LVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ-------- 68 (172)
T ss_pred EEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc--------
Confidence 35559999997666666666666778899999999765422 1111 0245799999999986432
Q ss_pred HHHHhchHHHHHHHHHhccCCcEEE--Ec-CcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCc
Q 020547 135 CKRRFNVRLWKIFTDCFNCLPVAAL--ID-EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGW 211 (325)
Q Consensus 135 ~~~~~~~~~~~~~~~~f~~LPla~~--i~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~ 211 (325)
..+|-... ++ -+++++||.....-
T Consensus 69 -----------------~~~p~~~~~~~~g~ki~l~HGh~~~~~------------------------------------ 95 (172)
T COG0622 69 -----------------EELPEELVLEVGGVKIFLTHGHLYFVK------------------------------------ 95 (172)
T ss_pred -----------------ccCChhHeEEECCEEEEEECCCccccc------------------------------------
Confidence 22333222 23 48999999654211
Q ss_pred ccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCC--CCCeEEEEEEcCC-cceEE
Q 020547 212 EANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGE--FDNAGAMMSVDET-LMCSF 288 (325)
Q Consensus 212 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~--~~n~ga~l~i~~~-~~~~~ 288 (325)
.....++.+-+..+.+.+|.||+..+.=++ . ++ +++-+|.-+.. +++..+++.++.+ .++..
T Consensus 96 ----------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~-~-~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~ 160 (172)
T COG0622 96 ----------TDLSLLEYLAKELGADVLIFGHTHKPVAEK-V-GG---ILLVNPGSVSGPRGGNPASYAILDVDNLEVEV 160 (172)
T ss_pred ----------cCHHHHHHHHHhcCCCEEEECCCCcccEEE-E-CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEE
Confidence 123456666777789999999999854333 2 22 34445544332 2244355555444 45555
Q ss_pred EEecc
Q 020547 289 QILKP 293 (325)
Q Consensus 289 ~~~~~ 293 (325)
..++.
T Consensus 161 ~~~~~ 165 (172)
T COG0622 161 LFLER 165 (172)
T ss_pred EEeec
Confidence 55544
No 53
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.93 E-value=1.4e-05 Score=71.65 Aligned_cols=67 Identities=28% Similarity=0.287 Sum_probs=47.4
Q ss_pred EEEecCCCHH----HHHHHHHhCCCCCCCceEeeCCccCCCCCcH-HHHHHHHHHHHhcCCcEEEeCCCccccc
Q 020547 56 KICDIHGQYS----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 124 (325)
Q Consensus 56 ~I~DIHG~~~----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll~~lk~~~p~~v~llrGNHE~~~ 124 (325)
.++|+|+... .+.++++.+.....+.++++||++|.+.... +...++..+. .+..++.+.||||...
T Consensus 6 ~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 6 HLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred EEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 3449998743 6677777665555677889999999988765 4445444442 3456999999999753
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.90 E-value=2.3e-05 Score=73.32 Aligned_cols=63 Identities=22% Similarity=0.104 Sum_probs=45.0
Q ss_pred ecCCC----HHHHHHHHHhCCCCCCCceEeeCCccCCC--CCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 59 DIHGQ----YSDLLRLFEYGGLPPRSNYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 59 DIHG~----~~~L~~il~~~g~~~~~~~vfLGD~VDRG--~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
|+|.. ...+.++++.......+-++++||++|++ ....++...+..|+.. ..++.+.||||..
T Consensus 57 DlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 57 DLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred ccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 99976 55677777765555667888999999954 2333455666666543 3599999999974
No 55
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.84 E-value=0.00077 Score=59.76 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=31.2
Q ss_pred CCCCceEeeCCccCCCCCc---HHHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 77 PPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
...+.+|++||+++.+... .+.+..+++......-.++++.||||
T Consensus 40 ~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 40 EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 3457799999999977754 44444444433333456999999999
No 56
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.83 E-value=0.0001 Score=74.87 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=38.4
Q ss_pred EEecC-CCH----HHHHHHHHhCC---------CCCCCceEeeCCccCC-CCCc---------------HHHHHHHHHHH
Q 020547 57 ICDIH-GQY----SDLLRLFEYGG---------LPPRSNYLFLGDYVDR-GKQS---------------LETICLLLAYK 106 (325)
Q Consensus 57 I~DIH-G~~----~~L~~il~~~g---------~~~~~~~vfLGD~VDR-G~~s---------------~evl~ll~~lk 106 (325)
|+|+| |.. ..+..+++.+. ....+.+|++||++|. |.++ .++..+|.++.
T Consensus 249 ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~L~~L~ 328 (504)
T PRK04036 249 ISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEYLKQIP 328 (504)
T ss_pred EcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHHHHhhh
Confidence 34999 652 23444444332 2234678999999995 3221 12334444442
Q ss_pred HhcCCcEEEeCCCccccc
Q 020547 107 IKYPENFFLLRGNHECAS 124 (325)
Q Consensus 107 ~~~p~~v~llrGNHE~~~ 124 (325)
..-.|++++||||...
T Consensus 329 --~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 329 --EDIKIIISPGNHDAVR 344 (504)
T ss_pred --cCCeEEEecCCCcchh
Confidence 2336999999999754
No 57
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.81 E-value=0.0015 Score=60.97 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCC--CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 64 YSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 64 ~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
...|.++++.+.. +..+-+|+.||+++.|. .+-+..+.+.-...+..+++++||||..
T Consensus 39 ~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~GNHD~~ 98 (275)
T PRK11148 39 WESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPGNHDFQ 98 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCCCCCCh
Confidence 4567777776532 24577889999999874 3333333333234456799999999973
No 58
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.79 E-value=0.00058 Score=63.08 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=34.2
Q ss_pred HHHHHHhCCC--CCCCceEeeCCccCCCCCcH---HHHHHHHH-HHHh-cCCcEEEeCCCcccc
Q 020547 67 LLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL---ETICLLLA-YKIK-YPENFFLLRGNHECA 123 (325)
Q Consensus 67 L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~---evl~ll~~-lk~~-~p~~v~llrGNHE~~ 123 (325)
|.++++.+.. +..+-+|++||+++.|.... +....+.+ ++.. .+-.++.++||||..
T Consensus 36 l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~ 99 (262)
T cd07395 36 TEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVG 99 (262)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCC
Confidence 5566665432 24567888999999987542 11122222 2211 234699999999974
No 59
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.68 E-value=0.00038 Score=59.78 Aligned_cols=47 Identities=26% Similarity=0.286 Sum_probs=29.8
Q ss_pred CCCceEeeCCccCCCCCcH-HHH-HHHHHHHHh---c-CCcEEEeCCCccccc
Q 020547 78 PRSNYLFLGDYVDRGKQSL-ETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 124 (325)
Q Consensus 78 ~~~~~vfLGD~VDRG~~s~-evl-~ll~~lk~~---~-p~~v~llrGNHE~~~ 124 (325)
..+.+|++||++|.+.... +.. ..+..++.. . +..+++++||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4578999999999876432 221 222233222 1 346999999999743
No 60
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.60 E-value=0.00021 Score=62.07 Aligned_cols=57 Identities=19% Similarity=0.144 Sum_probs=33.9
Q ss_pred HHHHHHhCCCCCCCceEeeCCccCCCCCcH-HHHHHH-HHHHHhcCCcEEEeCCCcccc
Q 020547 67 LLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 67 L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~lk~~~p~~v~llrGNHE~~ 123 (325)
+.++.+.+.....+.+|++||++|...... +....+ .......+..+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 344444443445688999999998654332 211211 111123455799999999975
No 61
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.52 E-value=0.0002 Score=66.33 Aligned_cols=59 Identities=22% Similarity=0.308 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHH----HHHHHHHHhcCCcEEEeCCCcccc
Q 020547 65 SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 65 ~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
..|.++++.+.....+.+|+.||++|+...+.+.. .++..|+...|-.++++.||||..
T Consensus 26 ~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 26 AFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 34556665554455678999999999986665443 333344332235699999999975
No 62
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.47 E-value=0.00032 Score=65.27 Aligned_cols=62 Identities=19% Similarity=0.146 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCCCCCceEeeCCccCCCCC-cHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 64 YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 64 ~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~-s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
...+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.++||||....
T Consensus 26 ~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~GNHD~~~~ 88 (267)
T cd07396 26 LEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLGNHDLYNP 88 (267)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecCccccccc
Confidence 4566777776654456778899999998873 2233444444333344579999999997643
No 63
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.46 E-value=8.4e-06 Score=80.39 Aligned_cols=238 Identities=13% Similarity=0.048 Sum_probs=155.6
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeEeeCC-----eEEEecCCCHHHHHHHHHhCCCCCC-CceEeeCCccCCCCCcHH
Q 020547 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIEAP-----IKICDIHGQYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLE 97 (325)
Q Consensus 24 ~~l~~~~~~~l~~~a~~il~~ep~ll~~~~p-----i~I~DIHG~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~e 97 (325)
..|...++..++.-+.+++..+|+...+.+- +.+.|.||.+.|+...++.- |.. .-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 4567788899999999999999988877432 34449999999999998763 433 349999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHhch---HHHHHHHHHhccCC-cEEEEcCcEEEecCCCCC
Q 020547 98 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV---RLWKIFTDCFNCLP-VAALIDEKILCMHGGLSP 173 (325)
Q Consensus 98 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LP-la~~i~~~il~vHgGi~p 173 (325)
.+..+...+...|....+.|++||+..+...++|..+....++. .+...+.. ..++ ++....+.+ .-|.-+.-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~-le~~kvt~ 167 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPV-LEDHKVTL 167 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCcc-cccchhhH
Confidence 99999999999999999999999998888877877665544421 12221211 1111 333323211 11111100
Q ss_pred C--------------C-----CC-hhh----hhcCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHH
Q 020547 174 D--------------L-----HN-LNQ----IRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTE 229 (325)
Q Consensus 174 ~--------------~-----~~-l~~----i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~ 229 (325)
. + -+ +++ .+.+..+.+.. .-.+..|+++......+....++.+...++.....
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ 244 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNP 244 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCccc
Confidence 0 0 00 001 11111111111 44567888887654455556677777778888889
Q ss_pred HHHhCCCceEEEeeeee------------ccceEEecC---CeEEEEeeCCCCCC
Q 020547 230 FLQKHDLELICRAHQVV------------EDGYEFFAN---RRLITIFSAPNYCG 269 (325)
Q Consensus 230 fl~~~~~~~iIRgH~~~------------~~G~~~~~~---~~~iTifSa~~y~~ 269 (325)
|+.+.++.-+++.|.-+ ..+|...++ +.++++|+.+.++.
T Consensus 245 ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 245 YLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 99988888888888542 233333332 24899999998874
No 64
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.40 E-value=0.00033 Score=67.69 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCCCCCceEeeCCccCCC-CCcHHHHHHHHH--HHH--hcCCcEEEeCCCcccc
Q 020547 65 SDLLRLFEYGGLPPRSNYLFLGDYVDRG-KQSLETICLLLA--YKI--KYPENFFLLRGNHECA 123 (325)
Q Consensus 65 ~~L~~il~~~g~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--lk~--~~p~~v~llrGNHE~~ 123 (325)
..|.++++.+.....+.+|+.||++|+. +.+.+++.++.. ++. ..+-.+++|.||||..
T Consensus 26 ~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 26 KFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 4566666665555668899999999985 455555544433 211 2345799999999974
No 65
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.39 E-value=0.0026 Score=58.93 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=23.3
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEec
Q 020547 227 VTEFLQKHDLELICRAHQVVEDGYEFFA 254 (325)
Q Consensus 227 ~~~fl~~~~~~~iIRgH~~~~~G~~~~~ 254 (325)
+.+.+++.++++++.||.....+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7778889999999999999988755543
No 66
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.34 E-value=0.0016 Score=59.46 Aligned_cols=197 Identities=16% Similarity=0.235 Sum_probs=101.3
Q ss_pred EEEecCCC------HHHHHHHHHhCCCCCCCceEeeCCccCC--CCC-c----HHHHHHHHHHHHhcCCcEEEeCCCccc
Q 020547 56 KICDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--GKQ-S----LETICLLLAYKIKYPENFFLLRGNHEC 122 (325)
Q Consensus 56 ~I~DIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDR--G~~-s----~evl~ll~~lk~~~p~~v~llrGNHE~ 122 (325)
.|+|+|=. .+.|.+.|+... +..+.+.++||++|- |.+ . .+|...|..+ .+...+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 57788854 344566666533 345778899999972 332 2 3333334333 2456789999999994
Q ss_pred cccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEE---cCcEEEecCCCCCCCC-Chhhhhc-----------CCCC
Q 020547 123 ASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---DEKILCMHGGLSPDLH-NLNQIRS-----------LPRP 187 (325)
Q Consensus 123 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i---~~~il~vHgGi~p~~~-~l~~i~~-----------i~rp 187 (325)
. +...++ .-...+.-+|-...+ +.+++++||-.--... .-...+. +..|
T Consensus 80 l-l~~~f~---------------~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 L-LGKRFA---------------QEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred H-HHHHHH---------------hhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 3 221110 001112333433332 4689999995531110 0000110 1111
Q ss_pred CCCCCchhHHHHhhcCCCCCCCCcccCCCCCe---eecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeC
Q 020547 188 TDVPESGLLCDLLWSDPSNDIKGWEANDRGVS---YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 264 (325)
Q Consensus 188 ~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa 264 (325)
+. -.--+..-+|+.- .|........ .-..+.++.+-+++++++.+|.||...+.........+| - -
T Consensus 144 l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi-~---l 212 (237)
T COG2908 144 LR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYI-N---L 212 (237)
T ss_pred HH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEE-e---c
Confidence 10 0011122245443 1222211111 124567788889999999999999998766554331111 1 1
Q ss_pred CCCCCCCCCeEEEEEEcCCcc
Q 020547 265 PNYCGEFDNAGAMMSVDETLM 285 (325)
Q Consensus 265 ~~y~~~~~n~ga~l~i~~~~~ 285 (325)
|.--..|++++++++..
T Consensus 213 ----GdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 ----GDWVSEGSILEVDDGGL 229 (237)
T ss_pred ----CcchhcceEEEEecCcE
Confidence 11125688999888754
No 67
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.32 E-value=0.00065 Score=61.54 Aligned_cols=66 Identities=24% Similarity=0.283 Sum_probs=42.1
Q ss_pred EEEecCCC------------HHHHHHHHHhCCCC--CCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 56 KICDIHGQ------------YSDLLRLFEYGGLP--PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 56 ~I~DIHG~------------~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
.|+|+|=. ...|.++++.+... ..+-+|++||+++.|... ....+.+.....+..++.++||||
T Consensus 4 ~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~GNHD 81 (240)
T cd07402 4 QISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPGNHD 81 (240)
T ss_pred EEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCCCCC
Confidence 34599944 34567777765433 567788999999987532 222222222223557999999999
Q ss_pred cc
Q 020547 122 CA 123 (325)
Q Consensus 122 ~~ 123 (325)
..
T Consensus 82 ~~ 83 (240)
T cd07402 82 DR 83 (240)
T ss_pred CH
Confidence 74
No 68
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.29 E-value=0.00077 Score=61.49 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=41.0
Q ss_pred CCeEEEecC-CCHHH----------------HHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEE
Q 020547 53 APIKICDIH-GQYSD----------------LLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 115 (325)
Q Consensus 53 ~pi~I~DIH-G~~~~----------------L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~l 115 (325)
.-++|+|+| |--.. |.++.+.......+.+|++||+++..... .....+.++.......+++
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~~~~~~v~~ 94 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKG-LEWRFIREFIEVTFRDLIL 94 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHHhcCCcEEE
Confidence 345666999 54222 23333333334467899999999765543 2222222211112347999
Q ss_pred eCCCccccc
Q 020547 116 LRGNHECAS 124 (325)
Q Consensus 116 lrGNHE~~~ 124 (325)
++||||...
T Consensus 95 V~GNHD~~~ 103 (225)
T TIGR00024 95 IRGNHDALI 103 (225)
T ss_pred ECCCCCCcc
Confidence 999999754
No 69
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.15 E-value=0.00084 Score=66.51 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=36.7
Q ss_pred HHHHHhCCCCCCCceEeeCCccCCCCCcHHHH----HHHHHHHHhcCCcEEEeCCCcccc
Q 020547 68 LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 68 ~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
.++++.+.....+.+|+.||++|++..+.+.. .++..|+. .+-.++++.||||..
T Consensus 29 ~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 29 DWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEEcCCCCCh
Confidence 34445444456788999999999986554432 23334432 345699999999975
No 70
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.14 E-value=0.00077 Score=58.37 Aligned_cols=44 Identities=30% Similarity=0.439 Sum_probs=32.0
Q ss_pred CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 77 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
.+.+.+|++||++++|..+.. +.++.+ .+..+++++||||....
T Consensus 41 ~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEEeCCCCchhh
Confidence 356889999999999986543 333333 34569999999997543
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.12 E-value=0.001 Score=59.24 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhc---CCcEEEeCCCcccccc
Q 020547 66 DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFFLLRGNHECASV 125 (325)
Q Consensus 66 ~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~---p~~v~llrGNHE~~~~ 125 (325)
.|.++++.+.....+.+|+.||++|....+.+.+..+...-... ...++++.||||....
T Consensus 29 ~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 29 AFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHDSPSR 91 (223)
T ss_pred HHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEEecCCCCCccc
Confidence 46666666555556789999999998876555444333332222 4569999999997654
No 72
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.02 E-value=0.0012 Score=58.81 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=22.3
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020547 223 GADRVTEFLQKHDLELICRAHQVVEDGYE 251 (325)
Q Consensus 223 g~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 251 (325)
.+..+.+.++..+.+.+|.||...+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 44556777888999999999998764433
No 73
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.98 E-value=0.0025 Score=57.84 Aligned_cols=204 Identities=16% Similarity=0.203 Sum_probs=90.2
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHH-------------------------HHHHHHHHhc
Q 020547 55 IKICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETI-------------------------CLLLAYKIKY 109 (325)
Q Consensus 55 i~I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl-------------------------~ll~~lk~~~ 109 (325)
++|+|.||+++.+.++...+.-...|-+||+||++-....+.|-. +-++..--..
T Consensus 9 lA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L~~~ 88 (255)
T PF14582_consen 9 LAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRILGEL 88 (255)
T ss_dssp EEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHHHhc
Confidence 567799999999999988765556788999999986554433322 2222222345
Q ss_pred CCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecC-----CCCCCCCChhhhhcC
Q 020547 110 PENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHG-----GLSPDLHNLNQIRSL 184 (325)
Q Consensus 110 p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHg-----Gi~p~~~~l~~i~~i 184 (325)
+-.+++|+||||..... |..+ .++ .----|..-.+.+.++.--| |..-.++.-....
T Consensus 89 ~~p~~~vPG~~Dap~~~----~lr~---a~~---------~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~-- 150 (255)
T PF14582_consen 89 GVPVFVVPGNMDAPERF----FLRE---AYN---------AEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREE-- 150 (255)
T ss_dssp -SEEEEE--TTS-SHHH----HHHH---HHH---------CCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BC--
T ss_pred CCcEEEecCCCCchHHH----HHHH---Hhc---------cceeccceeeeeeeecccCCcEEEEecCccccCCCccc--
Confidence 66799999999986321 1111 111 00012333333333222221 1111111111110
Q ss_pred CCCCCCCCch--hHHHHhhcC-CCCCCCCcccCC-CCCe-eecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEE
Q 020547 185 PRPTDVPESG--LLCDLLWSD-PSNDIKGWEAND-RGVS-YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLI 259 (325)
Q Consensus 185 ~rp~~~~~~~--~~~dllWsD-P~~~~~~~~~~~-rg~g-~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~i 259 (325)
..++..|.+. ....++|-= +...+--+...| -+.+ ..-|+.++.+|.++.+-+..+.||-....|-+.-.+
T Consensus 151 ~~~LrYP~weaey~lk~l~elk~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~---- 226 (255)
T PF14582_consen 151 EFKLRYPAWEAEYSLKFLRELKDYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHGKESLGK---- 226 (255)
T ss_dssp SSS-EEEHHHHHHHHGGGGGCTSSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE--EEETT----
T ss_pred cccccchHHHHHHHHHHHHhcccccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcEEEecccccchhhHHhCC----
Confidence 1111222221 112334421 111111111111 2223 456899999999999999999999887777776655
Q ss_pred EEeeCCCCCCCCCCeEEEEEEcC
Q 020547 260 TIFSAPNYCGEFDNAGAMMSVDE 282 (325)
Q Consensus 260 TifSa~~y~~~~~n~ga~l~i~~ 282 (325)
|+-.+|.-... ..-|++.+..
T Consensus 227 TlVVNPGsL~~--G~yAvI~l~~ 247 (255)
T PF14582_consen 227 TLVVNPGSLAE--GDYAVIDLEQ 247 (255)
T ss_dssp EEEEE--BGGG--TEEEEEETTT
T ss_pred EEEecCccccc--CceeEEEecc
Confidence 34444543322 3566666544
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.98 E-value=0.0019 Score=58.96 Aligned_cols=45 Identities=29% Similarity=0.256 Sum_probs=29.5
Q ss_pred CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 77 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
++.|-+|+.||++++++.. +....+..++. .|..++++.||||..
T Consensus 40 ~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~GNHD~~ 84 (232)
T cd07393 40 APEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLKGNHDYW 84 (232)
T ss_pred CCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEeCCcccc
Confidence 4567788999999887633 33233323332 234589999999973
No 75
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.88 E-value=0.0035 Score=57.82 Aligned_cols=69 Identities=23% Similarity=0.249 Sum_probs=47.9
Q ss_pred EEEecCCC------HHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHH--hcCCcEEEeCCCccccccc
Q 020547 56 KICDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKI--KYPENFFLLRGNHECASVN 126 (325)
Q Consensus 56 ~I~DIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~--~~p~~v~llrGNHE~~~~~ 126 (325)
.|+|+|-- ...+.++++.....+.|-+|+.||+.+.|. .+-+..+..+-. ..+..+++++||||.+..+
T Consensus 5 ~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~~~ 81 (301)
T COG1409 5 HISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARVVN 81 (301)
T ss_pred EEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCchH
Confidence 45599976 345566677777666688999999999963 222333333323 5677899999999988654
No 76
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.83 E-value=0.0072 Score=57.08 Aligned_cols=67 Identities=24% Similarity=0.246 Sum_probs=43.3
Q ss_pred EEecCCCHHH--HHHHHHhCCCCCCCceEeeCCccCC-C-CCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 57 ICDIHGQYSD--LLRLFEYGGLPPRSNYLFLGDYVDR-G-KQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 57 I~DIHG~~~~--L~~il~~~g~~~~~~~vfLGD~VDR-G-~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
++|+|-.... ..+.+........|-+++.|||+|+ . +....+...+..|+ .|-.+|.+.||||...-
T Consensus 50 lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 50 LSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred eehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 4499987655 2222322222223778899999995 4 44455556666565 45579999999987644
No 77
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.81 E-value=0.0037 Score=61.86 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHh-----------------------------------
Q 020547 64 YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK----------------------------------- 108 (325)
Q Consensus 64 ~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~----------------------------------- 108 (325)
+..|.++++.+.....|-+|+.||++|++.-|.+++..++.+-.+
T Consensus 28 ~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~ 107 (405)
T TIGR00583 28 WNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNI 107 (405)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchhhccchhhhcccccccccccccccc
Confidence 557888888877667788999999999999998887655543222
Q ss_pred -cCCcEEEeCCCccccc
Q 020547 109 -YPENFFLLRGNHECAS 124 (325)
Q Consensus 109 -~p~~v~llrGNHE~~~ 124 (325)
..-.||.+-||||...
T Consensus 108 ~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 108 NVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCCCEEEEcCCCCCcc
Confidence 1236999999999864
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.81 E-value=0.0071 Score=51.77 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=78.6
Q ss_pred EEEecCCCHHHHHHHHHhCC--CCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchH
Q 020547 56 KICDIHGQYSDLLRLFEYGG--LPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYD 133 (325)
Q Consensus 56 ~I~DIHG~~~~L~~il~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (325)
+++|+||+++.+.+-++... -.+-+-+|++||+..-....-+. .-...=....|--.+++-||||
T Consensus 2 V~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~-~~y~~g~~~~pipTyf~ggn~~------------ 68 (150)
T cd07380 2 VCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEEL-EAYKDGSKKVPIPTYFLGGNNP------------ 68 (150)
T ss_pred eeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhH-HHHhcCCccCCCCEEEECCCCC------------
Confidence 56699999999877776532 13457788999999766655333 3333334467778999999997
Q ss_pred HHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCCCccc
Q 020547 134 ECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEA 213 (325)
Q Consensus 134 e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~ 213 (325)
+-+||++|.=+. ++...+++. .+.
T Consensus 69 ---------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~~--------- 92 (150)
T cd07380 69 ---------------------------GVDILLTSEWPK-GISKLSKVP-------------------FEE--------- 92 (150)
T ss_pred ---------------------------CCCEEECCCCch-hhhhhCCCc-------------------ccc---------
Confidence 447888887332 111111110 000
Q ss_pred CCCCCeeecChHHHHHHHHhCCCceEEEeeeee
Q 020547 214 NDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 246 (325)
Q Consensus 214 ~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~ 246 (325)
.+..-|...+++++++..-++.+.||...
T Consensus 93 ----~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 93 ----TLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----cccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 12345889999999999999999999754
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.75 E-value=0.0019 Score=59.20 Aligned_cols=68 Identities=19% Similarity=0.269 Sum_probs=37.4
Q ss_pred eEEEecC--CCH---HHHHHHHHhC-CCC----CCCceEeeCCccCCCCC------------cH----HHHHHHHHHHHh
Q 020547 55 IKICDIH--GQY---SDLLRLFEYG-GLP----PRSNYLFLGDYVDRGKQ------------SL----ETICLLLAYKIK 108 (325)
Q Consensus 55 i~I~DIH--G~~---~~L~~il~~~-g~~----~~~~~vfLGD~VDRG~~------------s~----evl~ll~~lk~~ 108 (325)
+.|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... .. ++..++.+|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 3566999 331 2223333332 221 23778899999997320 01 1222333332
Q ss_pred cCCcEEEeCCCccccc
Q 020547 109 YPENFFLLRGNHECAS 124 (325)
Q Consensus 109 ~p~~v~llrGNHE~~~ 124 (325)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2346999999999753
No 80
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.71 E-value=0.0033 Score=54.83 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=30.9
Q ss_pred CCCCceEeeCCccCCCCCcH--HHHHHHHHHHHhc--------CCcEEEeCCCccccc
Q 020547 77 PPRSNYLFLGDYVDRGKQSL--ETICLLLAYKIKY--------PENFFLLRGNHECAS 124 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~--------p~~v~llrGNHE~~~ 124 (325)
...+.+||+||++|.+.... +....+..++..+ ...+++++||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34578999999999987432 2222232222211 346999999999864
No 81
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=96.58 E-value=0.0044 Score=57.88 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=41.9
Q ss_pred EE-EecCCCHHHHHHHHHhC---CCCCCCceEeeCCccCCCCCc-HHHH----------HHHHHH--HHhcCCcEEEeCC
Q 020547 56 KI-CDIHGQYSDLLRLFEYG---GLPPRSNYLFLGDYVDRGKQS-LETI----------CLLLAY--KIKYPENFFLLRG 118 (325)
Q Consensus 56 ~I-~DIHG~~~~L~~il~~~---g~~~~~~~vfLGD~VDRG~~s-~evl----------~ll~~l--k~~~p~~v~llrG 118 (325)
+| +|+||+++.+...++.. ...+.+-+|++||+-..+..+ .+.+ ++..-+ ....|-.+++|.|
T Consensus 2 ~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~G 81 (262)
T cd00844 2 AVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGG 81 (262)
T ss_pred EEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECC
Confidence 44 49999999887644432 234567889999997554332 2222 111111 2235666899999
Q ss_pred Ccccc
Q 020547 119 NHECA 123 (325)
Q Consensus 119 NHE~~ 123 (325)
|||..
T Consensus 82 NHE~~ 86 (262)
T cd00844 82 NHEAS 86 (262)
T ss_pred CCCCH
Confidence 99964
No 82
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.57 E-value=0.0042 Score=55.44 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=33.1
Q ss_pred CCCceEeeCCccCCCCCc--HHHHHHHHHHHHhcC----CcEEEeCCCcccc
Q 020547 78 PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 123 (325)
Q Consensus 78 ~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p----~~v~llrGNHE~~ 123 (325)
..+-+|||||++|.|+.+ .+....+..++..++ -.++.|.||||--
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457799999999999964 335565555554322 3689999999964
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.54 E-value=0.051 Score=50.52 Aligned_cols=24 Identities=4% Similarity=-0.020 Sum_probs=21.8
Q ss_pred cChHHHHHHHHhCCCceEEEeeee
Q 020547 222 FGADRVTEFLQKHDLELICRAHQV 245 (325)
Q Consensus 222 fg~~~~~~fl~~~~~~~iIRgH~~ 245 (325)
-.+++.++.|++.+-.+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 478889999999999999999986
No 84
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=95.99 E-value=0.02 Score=53.50 Aligned_cols=66 Identities=17% Similarity=0.105 Sum_probs=37.2
Q ss_pred EEEecCC----CHHHHHHHHHhCCCCCCCceEeeCCccCCCCCc-----HHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 56 KICDIHG----QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 56 ~I~DIHG----~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
+++|.|. +...+.++.+. ....+-+|++||+++.+... -.....+..+.... .++.++||||....
T Consensus 9 v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD~~~~ 83 (294)
T cd00839 9 VFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHEADYN 83 (294)
T ss_pred EEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCcccccccC
Confidence 3349995 33344444443 23456788999999654332 12222222222223 59999999997643
No 85
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.81 E-value=0.018 Score=51.31 Aligned_cols=65 Identities=17% Similarity=0.181 Sum_probs=43.2
Q ss_pred ecCCCHHHHHHHHHhCCC-CCCCceEeeCCccCCCCCcHH-HHHHHHHHHHhc---------------------CCcEEE
Q 020547 59 DIHGQYSDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQSLE-TICLLLAYKIKY---------------------PENFFL 115 (325)
Q Consensus 59 DIHG~~~~L~~il~~~g~-~~~~~~vfLGD~VDRG~~s~e-vl~ll~~lk~~~---------------------p~~v~l 115 (325)
|++|+=.=|.++++.+-. -..+.++||||++|.|--+-+ -......++..+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 889888888888876533 334678899999998753322 223333343322 135789
Q ss_pred eCCCcccc
Q 020547 116 LRGNHECA 123 (325)
Q Consensus 116 lrGNHE~~ 123 (325)
|.||||--
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999973
No 86
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.79 E-value=0.18 Score=50.53 Aligned_cols=205 Identities=19% Similarity=0.205 Sum_probs=105.5
Q ss_pred eEEEecCC-CH----HHHHHHHHhCCCCC----CCceE-eeCCccCCC------------CCcHHHHHHHHHHHHhcCC-
Q 020547 55 IKICDIHG-QY----SDLLRLFEYGGLPP----RSNYL-FLGDYVDRG------------KQSLETICLLLAYKIKYPE- 111 (325)
Q Consensus 55 i~I~DIHG-~~----~~L~~il~~~g~~~----~~~~v-fLGD~VDRG------------~~s~evl~ll~~lk~~~p~- 111 (325)
+.|+|+|= .. +.+...++.++-+. .-+|+ ..||.||.. .+..+-+..+..+--+-|.
T Consensus 229 ~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp~~ 308 (481)
T COG1311 229 ALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVPEH 308 (481)
T ss_pred EEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCCCC
Confidence 34459995 32 33344444443332 23555 579999942 1223334444444444565
Q ss_pred -cEEEeCCCcccccccccc-CchHHHHHHhchHHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCCChhhhhcCCCCC
Q 020547 112 -NFFLLRGNHECASVNRVY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPRPT 188 (325)
Q Consensus 112 -~v~llrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~~l~~i~~i~rp~ 188 (325)
.|++.+||||........ .+.+..... +...+-.|=.=|....+++ .++..|| .++++|...-...
T Consensus 309 I~v~i~PGnhDa~r~a~PQp~~~~~~ksl-----f~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~~ 377 (481)
T COG1311 309 IKVFIMPGNHDAVRQALPQPHFPELIKSL-----FSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPGA 377 (481)
T ss_pred ceEEEecCCCCccccccCCCCcchhhccc-----ccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCCC
Confidence 479999999975443221 232222222 2222112222354444554 6888888 4677766543332
Q ss_pred CC--CCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCC
Q 020547 189 DV--PESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPN 266 (325)
Q Consensus 189 ~~--~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~ 266 (325)
+. +..-.-+-+.|.-=.+...+-.+ .+-|. -+-|.=.---+.++.||++. .|+....+.++|..+|.+.
T Consensus 378 ~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~---kD~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q~ 448 (481)
T COG1311 378 DYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPET---KDYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQE 448 (481)
T ss_pred CccchHHHHHHHHHhcccCCCCCCccc-----cccCC---cCceeeccCCcEEEEccccc-cceeEEeccceEEeeeecc
Confidence 22 11222333455432221111110 01111 11122222467899999997 7999888888999998886
Q ss_pred CCCCCCCeEEEEEEcCC
Q 020547 267 YCGEFDNAGAMMSVDET 283 (325)
Q Consensus 267 y~~~~~n~ga~l~i~~~ 283 (325)
+. ..+-++-|+..
T Consensus 449 qT----efqk~vni~p~ 461 (481)
T COG1311 449 QT----EFQKMVNINPT 461 (481)
T ss_pred hh----ccceEEEecCc
Confidence 54 34556666654
No 87
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.69 E-value=0.02 Score=56.16 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcC---CcEEEeCCCcccccc
Q 020547 64 YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYP---ENFFLLRGNHECASV 125 (325)
Q Consensus 64 ~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p---~~v~llrGNHE~~~~ 125 (325)
+.+|..+++.+.-...|-+|+-||++|++.-|.+++.++...-.+.. -.|++|.||||...-
T Consensus 26 ~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 26 KKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 34555566655555568899999999999888888766555432222 369999999997643
No 88
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.07 E-value=0.032 Score=51.05 Aligned_cols=62 Identities=27% Similarity=0.275 Sum_probs=38.1
Q ss_pred EEecCCCH---------HHHHHHHHhCCCCCCC-ceEeeCCccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 57 ICDIHGQY---------SDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 57 I~DIHG~~---------~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
++|+||.+ ..+.++++.......+ -+|..||+++.++.+. .++..+.++ +- .++..||||
T Consensus 6 ~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~-d~~~~GNHe 80 (252)
T cd00845 6 TNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GY-DAVTIGNHE 80 (252)
T ss_pred ecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CC-CEEeecccc
Confidence 44999886 5566666665433334 4566899999887643 344444333 22 334569999
Q ss_pred cc
Q 020547 122 CA 123 (325)
Q Consensus 122 ~~ 123 (325)
..
T Consensus 81 ~d 82 (252)
T cd00845 81 FD 82 (252)
T ss_pred cc
Confidence 63
No 89
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.07 E-value=0.62 Score=43.71 Aligned_cols=62 Identities=24% Similarity=0.266 Sum_probs=37.1
Q ss_pred HHHHHHHHhCCC--CCCCceEeeCCccCCCCCcH--H------HHHHHHHHHHhcCC-cEEEeCCCccccccc
Q 020547 65 SDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL--E------TICLLLAYKIKYPE-NFFLLRGNHECASVN 126 (325)
Q Consensus 65 ~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~lk~~~p~-~v~llrGNHE~~~~~ 126 (325)
..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 344444444322 35677889999998876431 1 11223334444443 699999999986543
No 90
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=94.39 E-value=0.082 Score=45.45 Aligned_cols=45 Identities=20% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 77 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
.|.|.+.+|||+.-.-....+...++-+ .|+++++++||||-..-
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~~ 88 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCHP 88 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCcc
Confidence 4677888999998655544444444433 47899999999996543
No 91
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=93.97 E-value=0.18 Score=46.28 Aligned_cols=51 Identities=22% Similarity=0.276 Sum_probs=32.1
Q ss_pred CCCceEeeCCccCCCCC-----cHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCc
Q 020547 78 PRSNYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 131 (325)
Q Consensus 78 ~~~~~vfLGD~VDRG~~-----s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf 131 (325)
..+++|++||+-.-.+. ..++-.++..++. . .+.+++||||...-....++
T Consensus 63 ~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~-~--evi~i~GNHD~~i~~~~~~~ 118 (235)
T COG1407 63 GPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE-R--EVIIIRGNHDNGIEEILPGF 118 (235)
T ss_pred CCCEEEEcCccccccCccccccHHHHHHHHHHhcc-C--cEEEEeccCCCccccccccC
Confidence 35789999999865433 2444444433332 2 49999999998654443333
No 92
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=93.88 E-value=0.16 Score=40.08 Aligned_cols=44 Identities=18% Similarity=0.352 Sum_probs=32.2
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeEe
Q 020547 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEI 51 (325)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~~ 51 (325)
+|.+.++.+++.+-..+ .|+...+..|+.+|.++|+++|++++|
T Consensus 52 it~efv~~mie~FK~~K-------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 52 ITLEFVKAMIEWFKNQK-------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --HHHHHHHHHHHHCT-----------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCHHHHHHHHHHHHhCC-------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 46677888888874332 788999999999999999999999986
No 93
>PLN02533 probable purple acid phosphatase
Probab=93.56 E-value=0.097 Score=52.28 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=20.3
Q ss_pred HHHHHHHHhCCCceEEEeeeeecc
Q 020547 225 DRVTEFLQKHDLELICRAHQVVED 248 (325)
Q Consensus 225 ~~~~~fl~~~~~~~iIRgH~~~~~ 248 (325)
+.++..++++++++++-||...-+
T Consensus 312 ~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 312 ESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHhCCcEEEecceeccc
Confidence 567888999999999999998533
No 94
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=92.87 E-value=0.13 Score=47.87 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=16.1
Q ss_pred HHHHHHh-CCCceEEEeeeeec
Q 020547 227 VTEFLQK-HDLELICRAHQVVE 247 (325)
Q Consensus 227 ~~~fl~~-~~~~~iIRgH~~~~ 247 (325)
..+++++ .++++||-||+...
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~~ 230 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHRR 230 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCccc
Confidence 4566666 68999999999863
No 95
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.76 E-value=1.2 Score=38.11 Aligned_cols=114 Identities=22% Similarity=0.347 Sum_probs=75.4
Q ss_pred EEEecCC--CHHHHHHHHHhCCCCCC-CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCch
Q 020547 56 KICDIHG--QYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 132 (325)
Q Consensus 56 ~I~DIHG--~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 132 (325)
+++|+|= ...+|-.-|++.-.|+. ..++++|++. |.|++++|..+. ..++++||--|..
T Consensus 5 ~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~--------- 66 (183)
T KOG3325|consen 5 VLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN--------- 66 (183)
T ss_pred EeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc---------
Confidence 4458774 23445555555556654 5688999976 889999987774 5799999977653
Q ss_pred HHHHHHhchHHHHHHHHHhccCCcEEEEc---CcEEEecCCCCCCCCChhhhhcCCCCCCCCCchhHHHHhhcCCCCCCC
Q 020547 133 DECKRRFNVRLWKIFTDCFNCLPVAALID---EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIK 209 (325)
Q Consensus 133 ~e~~~~~~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~ 209 (325)
...|..-++. =++-|+||-.- +=|.||.
T Consensus 67 -------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~---- 97 (183)
T KOG3325|consen 67 -------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE---- 97 (183)
T ss_pred -------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH----
Confidence 1123332222 27889999432 1244443
Q ss_pred CcccCCCCCeeecChHHHHHHHHhCCCceEEEeeeeeccceEE
Q 020547 210 GWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEF 252 (325)
Q Consensus 210 ~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~ 252 (325)
++.-.-+..+++.++-||+..-+.|+.
T Consensus 98 ----------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ----------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ----------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 455566778899999999998888874
No 96
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.22 E-value=0.26 Score=48.70 Aligned_cols=64 Identities=25% Similarity=0.316 Sum_probs=41.8
Q ss_pred ecCCCHHHHHHHHHhCCCC-CCCceEeeCCccCCCCCc--HHHHHHHHHHHHhcCC----cEEEeCCCccc
Q 020547 59 DIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 122 (325)
Q Consensus 59 DIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p~----~v~llrGNHE~ 122 (325)
|-=|+=.-|.+.+...-+. ..+.++||||++|-|... -|--.....++..++. .+..+.||||-
T Consensus 73 dk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 73 DKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 4444444556666554433 335677899999988744 4444555566666664 68999999994
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=92.01 E-value=0.2 Score=46.27 Aligned_cols=62 Identities=23% Similarity=0.152 Sum_probs=35.5
Q ss_pred EEecCCCH----------HHHHHHHHhCCCCCCCceEeeCCccCCCCCc-----HHHHHHHHHHHHhcCCcEEEeCCCcc
Q 020547 57 ICDIHGQY----------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHE 121 (325)
Q Consensus 57 I~DIHG~~----------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE 121 (325)
+.|+||++ ..+..+++.....+..-++..||+++..+.+ ..++..+-++ .-.+ ...||||
T Consensus 6 ~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~GNHe 80 (257)
T cd07408 6 TNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTPGNHE 80 (257)
T ss_pred eccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecccccc
Confidence 34999985 3455666554433344456689999876543 2233333222 2234 4569999
Q ss_pred cc
Q 020547 122 CA 123 (325)
Q Consensus 122 ~~ 123 (325)
..
T Consensus 81 fd 82 (257)
T cd07408 81 FD 82 (257)
T ss_pred cc
Confidence 63
No 98
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=90.87 E-value=0.17 Score=52.20 Aligned_cols=64 Identities=25% Similarity=0.324 Sum_probs=44.8
Q ss_pred ChHHHHHHHHhCCCc----eEEEeeeeec--cceE-EecCCeEEEE---eeCCCCCCCCCCeEEEEEEcCCcceEE
Q 020547 223 GADRVTEFLQKHDLE----LICRAHQVVE--DGYE-FFANRRLITI---FSAPNYCGEFDNAGAMMSVDETLMCSF 288 (325)
Q Consensus 223 g~~~~~~fl~~~~~~----~iIRgH~~~~--~G~~-~~~~~~~iTi---fSa~~y~~~~~n~ga~l~i~~~~~~~~ 288 (325)
.++..+..|+..|++ .||-||.||. +|-. ..++||++.| ||.+ |...++=+| +-.|.+....+.
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAG-YTLiyNS~gl~L 580 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAG-YTLIYNSYGLQL 580 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccc-eEEEecCCccee
Confidence 456678889999998 9999999987 6654 3578999999 7666 766544445 444444433333
No 99
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=90.87 E-value=0.52 Score=43.58 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCceEEEeeeeecc
Q 020547 225 DRVTEFLQKHDLELICRAHQVVED 248 (325)
Q Consensus 225 ~~~~~fl~~~~~~~iIRgH~~~~~ 248 (325)
..+.++++++++++++-||.....
T Consensus 191 ~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 191 DRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHcCCCEEEeCCcccce
Confidence 557788899999999999988643
No 100
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=90.58 E-value=0.32 Score=45.87 Aligned_cols=62 Identities=29% Similarity=0.350 Sum_probs=36.7
Q ss_pred EEecCCCHHH--------------HHHHHHhCCCC-CCCceEeeCCccCCCCC-c-----HHHHHHHHHHHHhcCCcEEE
Q 020547 57 ICDIHGQYSD--------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPENFFL 115 (325)
Q Consensus 57 I~DIHG~~~~--------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~lk~~~p~~v~l 115 (325)
+.|+||++.. +..+++..... +..-+|..||++...+. + ..++..+.++.. . .+
T Consensus 6 tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~----D-a~ 80 (288)
T cd07412 6 INDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV----D-AS 80 (288)
T ss_pred EeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----e-ee
Confidence 3499998553 55666654433 23345568999987664 2 234555544431 2 35
Q ss_pred eCCCcccc
Q 020547 116 LRGNHECA 123 (325)
Q Consensus 116 lrGNHE~~ 123 (325)
..||||.-
T Consensus 81 t~GNHefd 88 (288)
T cd07412 81 AVGNHEFD 88 (288)
T ss_pred eecccccc
Confidence 56999964
No 101
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=88.61 E-value=0.62 Score=43.17 Aligned_cols=51 Identities=18% Similarity=0.126 Sum_probs=26.6
Q ss_pred HHHHHHhCCCC-CCCce-EeeCCccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 67 LLRLFEYGGLP-PRSNY-LFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 67 L~~il~~~g~~-~~~~~-vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+..+++..... ..+.+ +..||+++..+.+. .++..+.++ +-.+ +. ||||..
T Consensus 38 ~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g~da-~~-GNHefd 95 (264)
T cd07411 38 IATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNAL----GVDA-MV-GHWEFT 95 (264)
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHhh----CCeE-Ee-cccccc
Confidence 44455544322 33334 45899998876432 333433332 2223 33 999964
No 102
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=88.43 E-value=0.0076 Score=58.59 Aligned_cols=193 Identities=11% Similarity=-0.097 Sum_probs=117.4
Q ss_pred CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHh----chHHHHHHHHHhccC
Q 020547 79 RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF----NVRLWKIFTDCFNCL 154 (325)
Q Consensus 79 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 154 (325)
.-..|+++++.+++...++.+.+-+..+..+..+.-..++||+.. +++++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 346889999999999999999999988888889999999999543 33333322111 124566677777888
Q ss_pred CcEEEEcCcEEEecCCCCCCCCChhhhhcCCCCC----CCCCchhHHHHhhcCCCCCCCCcccCCCCCeeecChHH--HH
Q 020547 155 PVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPT----DVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADR--VT 228 (325)
Q Consensus 155 Pla~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~----~~~~~~~~~dllWsDP~~~~~~~~~~~rg~g~~fg~~~--~~ 228 (325)
+...+.+ ++++.||+..|.......+..+.-.. +-...+ -..++=+|-.. ...|.. ++....||.+. .-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-eccccc--CCCccccccceeecc
Confidence 8887755 99999999999875544433221100 000011 11111111110 111211 22223333332 33
Q ss_pred HHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCCCCCCCeEEEEEEcCC
Q 020547 229 EFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET 283 (325)
Q Consensus 229 ~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~ 283 (325)
++....+.+...+.|.....+.....++ ++.++.+-|.-...+.++.|.+..+
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 4555666777777777654444444454 7788888887777888888888765
No 103
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=85.71 E-value=0.98 Score=50.75 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=34.9
Q ss_pred ecCCCH---HHHHHHHHhCCCCCCCceEe-eCCccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeCCCccc
Q 020547 59 DIHGQY---SDLLRLFEYGGLPPRSNYLF-LGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHEC 122 (325)
Q Consensus 59 DIHG~~---~~L~~il~~~g~~~~~~~vf-LGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE~ 122 (325)
|+||.+ ..+..+++.......+.+++ .||++++.+.+. .++.++.++. --+...||||.
T Consensus 668 D~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 668 DFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred ecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 999985 44444555433222333444 799999876442 3444444332 23569999996
No 104
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=85.34 E-value=1.3 Score=40.89 Aligned_cols=56 Identities=23% Similarity=0.140 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHhCCCCCCC-ceEeeCCccCCCCCc-----HHHHHHHHHHHHhcCCcEEEeCCCccc
Q 020547 62 GQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 122 (325)
Q Consensus 62 G~~~~L~~il~~~g~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~ 122 (325)
|.+..+..+++.......+ -+|..||+++.++.+ ..++..+..+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 3466777777765443334 455689999877532 34555554442 23567899996
No 105
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=84.91 E-value=2 Score=41.58 Aligned_cols=47 Identities=19% Similarity=0.197 Sum_probs=30.7
Q ss_pred CCCCceEeeCCccCCCCCc---HHHHHHHHHHHHhcCCcEEEeCCCccccc
Q 020547 77 PPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHECAS 124 (325)
Q Consensus 77 ~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~llrGNHE~~~ 124 (325)
...|-+||+||.|+. ... ..++.-..+-.+.+.=....+.||||...
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 445789999999987 333 33333333334444446889999999763
No 106
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=84.24 E-value=34 Score=31.84 Aligned_cols=48 Identities=17% Similarity=0.306 Sum_probs=30.2
Q ss_pred CceEEEeeeeeccceEEec--CCeEEEEeeCCCCCCCCCCeEEEEEEc-CCcceEE
Q 020547 236 LELICRAHQVVEDGYEFFA--NRRLITIFSAPNYCGEFDNAGAMMSVD-ETLMCSF 288 (325)
Q Consensus 236 ~~~iIRgH~~~~~G~~~~~--~~~~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~ 288 (325)
-+.++.|||+. -|.+... +++-+.+.|.|.|.. .|.++.+| +++.++.
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 56788999986 4555443 266778888898854 44444443 4455544
No 107
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=83.97 E-value=1.9 Score=40.36 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=16.3
Q ss_pred ChHHHHHHHHh-CCCceEEEeeeeec
Q 020547 223 GADRVTEFLQK-HDLELICRAHQVVE 247 (325)
Q Consensus 223 g~~~~~~fl~~-~~~~~iIRgH~~~~ 247 (325)
|.+.-.++.++ -++++||-||+...
T Consensus 193 G~~~d~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 193 GYEVDKEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred CchhHHHHHHcCCCCcEEEeCCcCcc
Confidence 33333445554 48999999998764
No 108
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=83.80 E-value=8 Score=34.33 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=65.4
Q ss_pred CceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCch----------------HHHHHHhchHH
Q 020547 80 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY----------------DECKRRFNVRL 143 (325)
Q Consensus 80 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 143 (325)
..+||+| .|-+.-|.+.++-+|+..|..+.++ .|+-|.+..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4588998 6899999999999998888776665 8999988877544432 23334444567
Q ss_pred HHHHHHHhccCCcEEEEcCcEEEecC
Q 020547 144 WKIFTDCFNCLPVAALIDEKILCMHG 169 (325)
Q Consensus 144 ~~~~~~~f~~LPla~~i~~~il~vHg 169 (325)
|..+...+.++++...+..+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888899998888778877777
No 109
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=80.09 E-value=2.1 Score=43.64 Aligned_cols=60 Identities=27% Similarity=0.341 Sum_probs=35.6
Q ss_pred ecCCCHH------------HHHHH---HHhCCCCCCCceEe-eCCccCCCC------CcHHHHHHHHHHHHhcCCcEEEe
Q 020547 59 DIHGQYS------------DLLRL---FEYGGLPPRSNYLF-LGDYVDRGK------QSLETICLLLAYKIKYPENFFLL 116 (325)
Q Consensus 59 DIHG~~~------------~L~~i---l~~~g~~~~~~~vf-LGD~VDRG~------~s~evl~ll~~lk~~~p~~v~ll 116 (325)
|+||++. .+.++ ++.........+++ .||++++.+ .....+.++-.++ -=...
T Consensus 34 D~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-----yDa~t 108 (517)
T COG0737 34 DLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-----YDAMT 108 (517)
T ss_pred cccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC-----CcEEe
Confidence 9999998 33333 33222222233333 799999843 2344556666664 23578
Q ss_pred CCCcccc
Q 020547 117 RGNHECA 123 (325)
Q Consensus 117 rGNHE~~ 123 (325)
.||||.-
T Consensus 109 iGNHEFd 115 (517)
T COG0737 109 LGNHEFD 115 (517)
T ss_pred ecccccc
Confidence 8999975
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=78.14 E-value=3.3 Score=36.66 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=37.0
Q ss_pred ecCCC-----HHHHHHHHHhCC-CCCCCceEeeCCccCCCCCcH----------HHHHHHHHHHHh-----cCCcEEEeC
Q 020547 59 DIHGQ-----YSDLLRLFEYGG-LPPRSNYLFLGDYVDRGKQSL----------ETICLLLAYKIK-----YPENFFLLR 117 (325)
Q Consensus 59 DIHG~-----~~~L~~il~~~g-~~~~~~~vfLGD~VDRG~~s~----------evl~ll~~lk~~-----~p~~v~llr 117 (325)
|+|=. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+... .--+|++++
T Consensus 6 g~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvlvP 85 (209)
T PF04042_consen 6 GPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQVVLVP 85 (209)
T ss_dssp S--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSEEEEE-
T ss_pred cCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccEEEEeC
Confidence 55544 677888888777 555678999999999632221 111122222111 224799999
Q ss_pred CCcccccc
Q 020547 118 GNHECASV 125 (325)
Q Consensus 118 GNHE~~~~ 125 (325)
|+||....
T Consensus 86 g~~D~~~~ 93 (209)
T PF04042_consen 86 GPNDPTSS 93 (209)
T ss_dssp -TTCTT-S
T ss_pred CCcccccc
Confidence 99997654
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=77.99 E-value=2.7 Score=39.60 Aligned_cols=37 Identities=24% Similarity=0.124 Sum_probs=23.0
Q ss_pred eEeeCCccCCCCCc-------HHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 82 YLFLGDYVDRGKQS-------LETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 82 ~vfLGD~VDRG~~s-------~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
++..||.++.-+.+ .-++.++-++. -=....||||.-
T Consensus 54 lld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg-----yDa~tlGNHEFd 97 (282)
T cd07407 54 LVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP-----YDLLTIGNHELY 97 (282)
T ss_pred EEeCCCccCCeeceeeecCCChHHHHHHHhcC-----CcEEeecccccC
Confidence 44589999865433 22344444442 346789999984
No 112
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=77.16 E-value=1.9 Score=43.19 Aligned_cols=42 Identities=24% Similarity=0.358 Sum_probs=33.7
Q ss_pred CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 79 RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 79 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
.+++=.+||+.||||++-.+++-|..+- .+-+-.||||--.+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 3566679999999999999999887653 68888999994433
No 113
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=75.01 E-value=5.4 Score=35.37 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHhCCCCCCCceEeeCCcc--CCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHHHHh
Q 020547 62 GQYSDLLRLFEYGGLPPRSNYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF 139 (325)
Q Consensus 62 G~~~~L~~il~~~g~~~~~~~vfLGD~V--DRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~ 139 (325)
|.-+...+-.+.. ..++|.++.-||+- -|=++..+-+.++-+| |+.=+++|||||.+.-. ...+...+
T Consensus 28 gh~ekI~k~W~~~-v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~l 97 (230)
T COG1768 28 GHHEKIKKHWRSK-VSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNAL 97 (230)
T ss_pred CchHHHHHHHHhc-CChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhc
Confidence 4444444433321 23455555669985 4555666666666554 88999999999987532 23333333
Q ss_pred chHHHHHHHHHhccCCcE
Q 020547 140 NVRLWKIFTDCFNCLPVA 157 (325)
Q Consensus 140 ~~~~~~~~~~~f~~LPla 157 (325)
... ....++.|..+-.|
T Consensus 98 p~~-l~~~n~~f~l~n~a 114 (230)
T COG1768 98 PPI-LFYLNNGFELLNYA 114 (230)
T ss_pred Cch-HhhhccceeEeeEE
Confidence 333 33456666666643
No 114
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=73.64 E-value=4.9 Score=38.41 Aligned_cols=60 Identities=22% Similarity=0.061 Sum_probs=35.0
Q ss_pred ecCCCHH------HHHHHHHhCCC-----CCCCceEeeCCccCCCCC-------------cHHHHHHHHHHHHhcCCcEE
Q 020547 59 DIHGQYS------DLLRLFEYGGL-----PPRSNYLFLGDYVDRGKQ-------------SLETICLLLAYKIKYPENFF 114 (325)
Q Consensus 59 DIHG~~~------~L~~il~~~g~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~lk~~~p~~v~ 114 (325)
|+||++. .+..+++.... .++.-++..||.+..++. ...++.++-++. -=.
T Consensus 8 D~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-----~Da 82 (313)
T cd08162 8 DGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-----VQA 82 (313)
T ss_pred ccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC-----CcE
Confidence 9999953 34334443321 223345558999976543 334455555554 235
Q ss_pred EeCCCcccc
Q 020547 115 LLRGNHECA 123 (325)
Q Consensus 115 llrGNHE~~ 123 (325)
...||||.-
T Consensus 83 ~tlGNHEFD 91 (313)
T cd08162 83 IALGNHEFD 91 (313)
T ss_pred Eeccccccc
Confidence 779999953
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=73.29 E-value=4.1 Score=38.31 Aligned_cols=15 Identities=27% Similarity=0.253 Sum_probs=12.5
Q ss_pred CCCceEEEeeeeecc
Q 020547 234 HDLELICRAHQVVED 248 (325)
Q Consensus 234 ~~~~~iIRgH~~~~~ 248 (325)
.++++||-||+...-
T Consensus 208 ~giD~IigGHsH~~~ 222 (285)
T cd07405 208 GGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCCEEEeCCCCccc
Confidence 589999999988644
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=72.06 E-value=4.8 Score=42.31 Aligned_cols=60 Identities=20% Similarity=0.119 Sum_probs=34.6
Q ss_pred ecCCCHHH----------------HHHHHHhCCCC-CCCceEeeCCccCCCCCc-------------HHHHHHHHHHHHh
Q 020547 59 DIHGQYSD----------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQS-------------LETICLLLAYKIK 108 (325)
Q Consensus 59 DIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~s-------------~evl~ll~~lk~~ 108 (325)
|+||++.. +..+++..... ++.-+|-.||.+...+.+ .-++.++-.|.
T Consensus 10 DlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~mN~lg-- 87 (626)
T TIGR01390 10 DLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAMNLLK-- 87 (626)
T ss_pred CCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHHhhcC--
Confidence 99999753 33444443222 233355589999866543 22445554443
Q ss_pred cCCcEEEeCCCcccc
Q 020547 109 YPENFFLLRGNHECA 123 (325)
Q Consensus 109 ~p~~v~llrGNHE~~ 123 (325)
-=....||||.-
T Consensus 88 ---yDa~tlGNHEFd 99 (626)
T TIGR01390 88 ---YDVGNLGNHEFN 99 (626)
T ss_pred ---ccEEeccccccc
Confidence 245789999953
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=69.60 E-value=6.2 Score=41.68 Aligned_cols=60 Identities=18% Similarity=0.107 Sum_probs=35.6
Q ss_pred ecCCCHHH----------------HHHHHHhCCCC-CCCceEeeCCccCCCCCcH-------------HHHHHHHHHHHh
Q 020547 59 DIHGQYSD----------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQSL-------------ETICLLLAYKIK 108 (325)
Q Consensus 59 DIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~-------------evl~ll~~lk~~ 108 (325)
|+||++.. +..+++..... ++.-+|-.||.+...+.+- .++..+-.+.
T Consensus 33 DlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~amN~lg-- 110 (649)
T PRK09420 33 DLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAMNTLD-- 110 (649)
T ss_pred ccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHHHhcC--
Confidence 99999743 33344433222 2334555899998766431 2455555553
Q ss_pred cCCcEEEeCCCcccc
Q 020547 109 YPENFFLLRGNHECA 123 (325)
Q Consensus 109 ~p~~v~llrGNHE~~ 123 (325)
-=....||||.-
T Consensus 111 ---yDa~tlGNHEFd 122 (649)
T PRK09420 111 ---YDVGNLGNHEFN 122 (649)
T ss_pred ---CcEEeccchhhh
Confidence 346789999953
No 118
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=69.17 E-value=13 Score=36.45 Aligned_cols=70 Identities=29% Similarity=0.401 Sum_probs=42.7
Q ss_pred eEEE-ecCCCHHHHH---HHHHhCCCCCCCceEeeCCccC-CCCCcHHHH------HHHHH------HHHhcCCcEEEeC
Q 020547 55 IKIC-DIHGQYSDLL---RLFEYGGLPPRSNYLFLGDYVD-RGKQSLETI------CLLLA------YKIKYPENFFLLR 117 (325)
Q Consensus 55 i~I~-DIHG~~~~L~---~il~~~g~~~~~~~vfLGD~VD-RG~~s~evl------~ll~~------lk~~~p~~v~llr 117 (325)
|+|- =.||.++.+- ...++.|-.+.|-++++||+=. |....+..+ .-+.. -....|--.+++-
T Consensus 3 IaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIG 82 (456)
T KOG2863|consen 3 IAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIG 82 (456)
T ss_pred eeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEec
Confidence 4444 7899999887 4455566667888999999853 222111111 11111 1224565678899
Q ss_pred CCccccc
Q 020547 118 GNHECAS 124 (325)
Q Consensus 118 GNHE~~~ 124 (325)
||||...
T Consensus 83 GNHEAsn 89 (456)
T KOG2863|consen 83 GNHEASN 89 (456)
T ss_pred CchHHHH
Confidence 9999863
No 119
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=68.93 E-value=5.6 Score=44.85 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=16.8
Q ss_pred hHHHHHHHHh-CCCceEEEeeeee
Q 020547 224 ADRVTEFLQK-HDLELICRAHQVV 246 (325)
Q Consensus 224 ~~~~~~fl~~-~~~~~iIRgH~~~ 246 (325)
+++..+..++ -+++.||-||+..
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~ 279 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHG 279 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCcc
Confidence 4455566644 4899999999875
No 120
>PF14164 YqzH: YqzH-like protein
Probab=68.14 E-value=21 Score=26.07 Aligned_cols=47 Identities=21% Similarity=0.303 Sum_probs=39.5
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 020547 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPN 47 (325)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ 47 (325)
|+...|+.+|.+-+..=.......+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 77888888888888665455567899999999999999999988874
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=62.92 E-value=10 Score=41.05 Aligned_cols=38 Identities=21% Similarity=0.009 Sum_probs=24.0
Q ss_pred ceEeeCCccCCCCCc--------------HHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 81 NYLFLGDYVDRGKQS--------------LETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 81 ~~vfLGD~VDRG~~s--------------~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
-+|..||.+...+.. ..++.++-.|. -=....||||.-
T Consensus 162 LllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 162 VLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred EEEecCCCCCCCcccchhhhccccccCcchHHHHHHhccC-----CCEEEechhhcc
Confidence 455589999865432 12555555553 346789999953
No 122
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=59.84 E-value=26 Score=36.03 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=32.1
Q ss_pred CHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHH
Q 020547 63 QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAY 105 (325)
Q Consensus 63 ~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~l 105 (325)
.+..|.+||..+.-...+-++.=||++.-..-|..++.-...+
T Consensus 37 Sf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 37 SFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred hHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 3778889998876666777777899999888887776544443
No 123
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=58.83 E-value=31 Score=26.08 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=45.6
Q ss_pred CCeEEEecCCCHHHHHHHHHhCCC--CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCc
Q 020547 53 APIKICDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 120 (325)
Q Consensus 53 ~pi~I~DIHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 120 (325)
.+.+|.|---|.+.+..+++.+.. +....++.+|+.-|+|....+....+-.+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 445555988888888888876532 34556778999999888888766666666666666666655554
No 124
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=57.46 E-value=25 Score=32.89 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=43.0
Q ss_pred eEEEecCCC--HHHHHHHHHhCCCCC-CCceEeeCCccCCC-CCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 55 IKICDIHGQ--YSDLLRLFEYGGLPP-RSNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 55 i~I~DIHG~--~~~L~~il~~~g~~~-~~~~vfLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+.|+||=|. ...+...|..+.... .+-+|..||....| .-+-++...|..+ .-.++.+ |||+..
T Consensus 4 lfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 4 LFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 456699999 566677776655433 34455589999766 4567777777655 3356656 999875
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=57.14 E-value=17 Score=37.50 Aligned_cols=39 Identities=26% Similarity=0.144 Sum_probs=23.8
Q ss_pred CceEeeCCccCCCCCc-----HHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 80 SNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 80 ~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
.-+|..||.+...+.+ ...+.++-++. --....||||.-
T Consensus 51 ~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 51 ALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred eEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 3455689999765433 22344444443 357789999964
No 126
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=55.41 E-value=6.8 Score=36.05 Aligned_cols=60 Identities=23% Similarity=0.247 Sum_probs=32.8
Q ss_pred cCCcEEEeCCCccccccccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEc-CcEEEecCCCCC
Q 020547 109 YPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSP 173 (325)
Q Consensus 109 ~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p 173 (325)
-.++|++|-||||.- .++.|.-.-.-.+-...+.| ..+..+|++-.-. .+++-.|-||-.
T Consensus 126 inknvvvlagnhein-~ngny~arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 126 INKNVVVLAGNHEIN-FNGNYMARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred cccceEEEecCceec-cCchHHHHHhhCCCCccchh----hccccccccccCcchhhhhcccCcee
Confidence 346899999999964 23333211110001122333 3346778775422 268888888854
No 127
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=53.87 E-value=15 Score=34.67 Aligned_cols=60 Identities=27% Similarity=0.351 Sum_probs=37.6
Q ss_pred EEecCCCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcC-CcEEEeCCCccccc
Q 020547 57 ICDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECAS 124 (325)
Q Consensus 57 I~DIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p-~~v~llrGNHE~~~ 124 (325)
|+|.|+...+.. ..|+.|.++-+||+-.-|. +-||..+=-.+- ..| +.=++|+||||.-.
T Consensus 67 isdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 67 ISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred ecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 349998666543 3567777888999887654 445544322221 223 23578999999653
No 128
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=52.91 E-value=22 Score=37.21 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=33.7
Q ss_pred CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccc
Q 020547 79 RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 122 (325)
Q Consensus 79 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 122 (325)
.+++-.+||+.||||.+-.+++.|+.. .+|=+-.||||-
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDI 223 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDI 223 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHH
Confidence 356778999999999999999999865 378899999993
No 129
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=50.99 E-value=40 Score=31.33 Aligned_cols=64 Identities=17% Similarity=0.099 Sum_probs=39.9
Q ss_pred eEEEecCCCHH--HHHHHHHhCCCCC-CCceEeeCCccCCC-CCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 020547 55 IKICDIHGQYS--DLLRLFEYGGLPP-RSNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 55 i~I~DIHG~~~--~L~~il~~~g~~~-~~~~vfLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+.|+||=|... .+...|....... .+-+|-.||..-.| .-+-++...|..+. -.+..+ ||||.-
T Consensus 3 lfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 3 LFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 45679999854 3455555443222 34444579998766 36777777776664 245555 999764
No 130
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=49.94 E-value=9.6 Score=31.85 Aligned_cols=86 Identities=26% Similarity=0.415 Sum_probs=49.0
Q ss_pred ecCCCHHHHHHHHHhCCCCCCCce--EeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccccccccCchHHHH
Q 020547 59 DIHGQYSDLLRLFEYGGLPPRSNY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECK 136 (325)
Q Consensus 59 DIHG~~~~L~~il~~~g~~~~~~~--vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~ 136 (325)
|+.|++..|++.|+.+++|..-.+ +-.|| +...+.++--.-+.|+..|.-.. +...|.....-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999843221 23444 33333333333333443332111 111222223333
Q ss_pred HHhchHHHHHHHHHhccCCcEE
Q 020547 137 RRFNVRLWKIFTDCFNCLPVAA 158 (325)
Q Consensus 137 ~~~~~~~~~~~~~~f~~LPla~ 158 (325)
.++-+.+|..+.+.|.+-|.-.
T Consensus 67 ~RF~E~vyk~LRdef~YkP~lT 88 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSLT 88 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC
Confidence 4556678888888888888753
No 131
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=48.82 E-value=18 Score=37.27 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=13.7
Q ss_pred HHHHhC---CCceEEEeeeee
Q 020547 229 EFLQKH---DLELICRAHQVV 246 (325)
Q Consensus 229 ~fl~~~---~~~~iIRgH~~~ 246 (325)
++.++. ++++||-||+..
T Consensus 236 ~la~~~~~~~IDvIlgGHsH~ 256 (551)
T PRK09558 236 EMARSLPAGGLDMIVGGHSQD 256 (551)
T ss_pred HHHHhCCccCceEEEeCCCCc
Confidence 444444 799999999985
No 132
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=48.22 E-value=23 Score=38.25 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=13.2
Q ss_pred HHhC-CCceEEEeeeeec
Q 020547 231 LQKH-DLELICRAHQVVE 247 (325)
Q Consensus 231 l~~~-~~~~iIRgH~~~~ 247 (325)
|++. +++.||-||+...
T Consensus 272 l~~v~gID~IlgGHsH~~ 289 (780)
T PRK09418 272 LTEVPGVDAVLMGHSHTE 289 (780)
T ss_pred HhcCCCCCEEEECCCCCc
Confidence 4444 8999999999863
No 133
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=47.19 E-value=34 Score=33.96 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=18.9
Q ss_pred HHHHHHHhCCCceEEEeeeeec
Q 020547 226 RVTEFLQKHDLELICRAHQVVE 247 (325)
Q Consensus 226 ~~~~fl~~~~~~~iIRgH~~~~ 247 (325)
.+.-.|+++++++.|-||+..-
T Consensus 239 ~L~PLL~ky~VdlYisGHDH~l 260 (394)
T PTZ00422 239 YLLPLLKDAQVDLYISGYDRNM 260 (394)
T ss_pred HHHHHHHHcCcCEEEEccccce
Confidence 4677899999999999999853
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=42.63 E-value=1.1e+02 Score=26.35 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=57.1
Q ss_pred ecCCCHHHHHHHHH-hCCC------------CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccccc
Q 020547 59 DIHGQYSDLLRLFE-YGGL------------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 125 (325)
Q Consensus 59 DIHG~~~~L~~il~-~~g~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 125 (325)
-.+||...+.+.+. .++. .....+||+|-.+|+|.-+-++..+|-.|+ +.+|++.
T Consensus 6 S~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF--------- 73 (160)
T PF12641_consen 6 SRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF--------- 73 (160)
T ss_pred CCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE---------
Confidence 66788777765543 2222 123579999999999999999999988764 4455432
Q ss_pred ccccCchHHHHHHhchHHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCC
Q 020547 126 NRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL 175 (325)
Q Consensus 126 ~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~ 175 (325)
...|+... ..|...+.+....++ |-...+- +.|+++|-++|.+
T Consensus 74 -~T~G~~~~--s~~~~~~~~~~~~~~---~~~~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 74 -GTAGAGPD--SEYAKKILKNVEALL---PKGNEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred -EecCCCCc--hHHHHHHHHHHHHhh---ccCCeec-ceEEeCCcCCHHH
Confidence 12233211 112223333333333 3222223 5788899988754
No 135
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=40.14 E-value=2.6e+02 Score=24.67 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=59.8
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhCCCeeEeeCCeEEEecCCCHHHHHHHHHhCCCCC-----------------------
Q 020547 22 KQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICDIHGQYSDLLRLFEYGGLPP----------------------- 78 (325)
Q Consensus 22 ~~~~l~~~~~~~l~~~a~~il~~ep~ll~~~~pi~I~DIHG~~~~L~~il~~~g~~~----------------------- 78 (325)
..+.++++++.+-+.+..+.+.++..= +.|++|+=++|++--+..++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~g---~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~ 84 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYGG---KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKIL 84 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhCC---CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEe
Confidence 456899999999998888888877533 678888899999988888877665432
Q ss_pred --------CCceEeeCCccCCCCCcHHHHHHHH
Q 020547 79 --------RSNYLFLGDYVDRGKQSLETICLLL 103 (325)
Q Consensus 79 --------~~~~vfLGD~VDRG~~s~evl~ll~ 103 (325)
..+++.+=|++|-|.---.+.++|.
T Consensus 85 kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 85 KDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 1258889999999876666655553
No 136
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.45 E-value=53 Score=33.24 Aligned_cols=67 Identities=21% Similarity=0.368 Sum_probs=48.6
Q ss_pred CCeEEE-ecCCCHHHHHHHHHhCCC--CCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCc
Q 020547 53 APIKIC-DIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 120 (325)
Q Consensus 53 ~pi~I~-DIHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 120 (325)
..|.|+ |+-|+++.|.+-++.... .|-+-++++|++++-...+-|++.+.... ...|-.++++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 345566 999999998776665433 23577889999999867777877665443 35677788887776
No 137
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=39.23 E-value=85 Score=25.07 Aligned_cols=50 Identities=14% Similarity=0.206 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhCCCeeEeeCCeEEE--ecCCCHHHHHHHHHhCCCCCCCceEe-eCCcc
Q 020547 34 LCVVSKGIFLRQPNLLEIEAPIKIC--DIHGQYSDLLRLFEYGGLPPRSNYLF-LGDYV 89 (325)
Q Consensus 34 l~~~a~~il~~ep~ll~~~~pi~I~--DIHG~~~~L~~il~~~g~~~~~~~vf-LGD~V 89 (325)
.|..|+.+|.+ ...+..|+ |-|.+-.++++.+....-...--.|| -|.+|
T Consensus 26 ~c~~~k~ll~~------~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~i 78 (104)
T KOG1752|consen 26 YCHRAKELLSD------LGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFI 78 (104)
T ss_pred hHHHHHHHHHh------CCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEE
Confidence 46667888877 23333333 99999999999887654333334566 58888
No 138
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=38.14 E-value=1.1e+02 Score=30.15 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=42.2
Q ss_pred CCeEEE-ecC-CCHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcC-CcEEEe
Q 020547 53 APIKIC-DIH-GQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLL 116 (325)
Q Consensus 53 ~pi~I~-DIH-G~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p-~~v~ll 116 (325)
.++.|+ |-+ -+.+.+.+.|+.+...+..+++.+|+...-|.++.+....+......+. +.+++.
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~ 362 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV 362 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 345555 855 4899999988876533345677899998888888776666555543444 445543
No 139
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=36.09 E-value=42 Score=33.83 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCceEEEeeeeeccceEEecCCeE
Q 020547 225 DRVTEFLQKHDLELICRAHQVVEDGYEFFANRRL 258 (325)
Q Consensus 225 ~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~ 258 (325)
..++..+-++++++++-||...-+......+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3689999999999999999987666555455443
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=33.23 E-value=1.2e+02 Score=30.41 Aligned_cols=65 Identities=11% Similarity=0.037 Sum_probs=45.0
Q ss_pred CCeEEE-ecCC-CHHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhc-CCcEEEeCC
Q 020547 53 APIKIC-DIHG-QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 118 (325)
Q Consensus 53 ~pi~I~-DIHG-~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~-p~~v~llrG 118 (325)
.+++|+ |-+. +.+.+.+.|+.+...+..+++.+||+...|+.+.+...-+....... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 456777 7444 68888888876643344578889999999999999887776654443 3445443 5
No 141
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=30.18 E-value=2.7e+02 Score=26.52 Aligned_cols=67 Identities=15% Similarity=0.305 Sum_probs=0.0
Q ss_pred eEEEecCCC----HHHHHHHHHhC-CCCC----CCceEeeCCccCCC--CCc------HHHHHHHHH-HHHhcC-----C
Q 020547 55 IKICDIHGQ----YSDLLRLFEYG-GLPP----RSNYLFLGDYVDRG--KQS------LETICLLLA-YKIKYP-----E 111 (325)
Q Consensus 55 i~I~DIHG~----~~~L~~il~~~-g~~~----~~~~vfLGD~VDRG--~~s------~evl~ll~~-lk~~~p-----~ 111 (325)
++++|+|=+ ++.|.++|+.. ...+ ...+||+|+++-+. ... .+-.+-|.. +...+| .
T Consensus 31 VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~~~s 110 (291)
T PTZ00235 31 IIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLILEHC 110 (291)
T ss_pred EEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHHhcC
Q ss_pred cEEEeCCCcc
Q 020547 112 NFFLLRGNHE 121 (325)
Q Consensus 112 ~v~llrGNHE 121 (325)
++++++|-.|
T Consensus 111 ~fVFVPGpnD 120 (291)
T PTZ00235 111 YLIFIPGIND 120 (291)
T ss_pred eEEEECCCCC
No 142
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.86 E-value=19 Score=30.93 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=29.5
Q ss_pred eecChHHHHHHHHhCC---------CceEEEeeeeeccceEEecCCeEEEEeeCCCCCCC
Q 020547 220 YVFGADRVTEFLQKHD---------LELICRAHQVVEDGYEFFANRRLITIFSAPNYCGE 270 (325)
Q Consensus 220 ~~fg~~~~~~fl~~~~---------~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~ 270 (325)
+.-++...+.||.+-| +..-|||+-+++..+.+.++ +.+|.||.+
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~ 73 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHN 73 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHh
Confidence 3445566778887764 55568999887544444333 669999964
No 143
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=28.71 E-value=41 Score=31.53 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=24.6
Q ss_pred ceEeeCCccCCCCCcHHHH-HHHHHHHHhcCCcEEEeCCCcccc
Q 020547 81 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 123 (325)
Q Consensus 81 ~~vfLGD~VDRG~~s~evl-~ll~~lk~~~p~~v~llrGNHE~~ 123 (325)
+++|+||+|.+ ...+.+ ..|-.+|.+++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 58999999954 333333 5666777777755444 455544
No 144
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=28.48 E-value=1.1e+02 Score=27.67 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=28.1
Q ss_pred HHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeCCCCC
Q 020547 229 EFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 268 (325)
Q Consensus 229 ~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 268 (325)
+.+-..|+++||-||..+..+++.. ++++| +||-=|+.
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 3333469999999999999999976 45655 67765553
No 145
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=26.94 E-value=1.3e+02 Score=27.76 Aligned_cols=39 Identities=23% Similarity=0.444 Sum_probs=31.9
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEeeC
Q 020547 223 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 264 (325)
Q Consensus 223 g~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~iTifSa 264 (325)
....+-+||+.+|.. .-+|++.+||.|++++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 456688999999965 468999999999998877887653
No 146
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=26.49 E-value=1.9e+02 Score=31.92 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=43.2
Q ss_pred CCeEEE-ecC-CCHHHHHHHHHhCCCCC-CCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCc
Q 020547 53 APIKIC-DIH-GQYSDLLRLFEYGGLPP-RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 120 (325)
Q Consensus 53 ~pi~I~-DIH-G~~~~L~~il~~~g~~~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 120 (325)
..+.|. |-+ -|.+.+...|+.+...+ ..+++.+|+.-+.|+.+.+.-..+-..........+++-|.+
T Consensus 834 ~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~ 904 (958)
T PRK11929 834 CGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEA 904 (958)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcC
Confidence 345555 866 47888888887764322 456888999999999887765544444333333445455644
No 147
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=25.17 E-value=65 Score=29.93 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=24.8
Q ss_pred ceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCC
Q 020547 81 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 118 (325)
Q Consensus 81 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrG 118 (325)
+++|+||+|.+.-.. -+-..|-.+|.+++..+.+.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 579999999875432 3346677788777766555433
No 148
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=22.05 E-value=2.4e+02 Score=22.26 Aligned_cols=44 Identities=16% Similarity=0.483 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCCCCCceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEe
Q 020547 64 YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 116 (325)
Q Consensus 64 ~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~ll 116 (325)
...+.++++. -|+.++|++|| .|..-.|++.-+ ...+|++|..+
T Consensus 52 ~~~i~~i~~~---fP~~kfiLIGD---sgq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 52 RDNIERILRD---FPERKFILIGD---SGQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHH---CCCCcEEEEee---CCCcCHHHHHHH---HHHCCCCEEEE
Confidence 3455566654 45778999997 666667777654 44688887543
No 149
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=21.08 E-value=1.3e+02 Score=30.66 Aligned_cols=55 Identities=27% Similarity=0.369 Sum_probs=38.2
Q ss_pred hHHHHHHHHhCCCc----eEEEeeeeeccc--eE-EecCCeEEEE---eeCCCCCCCCCCeEEEEE
Q 020547 224 ADRVTEFLQKHDLE----LICRAHQVVEDG--YE-FFANRRLITI---FSAPNYCGEFDNAGAMMS 279 (325)
Q Consensus 224 ~~~~~~fl~~~~~~----~iIRgH~~~~~G--~~-~~~~~~~iTi---fSa~~y~~~~~n~ga~l~ 279 (325)
++..++.|+..|++ .||-||.++.++ -. .-++||+|.| ||-. |...++=+|--|.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~TgiAGYTll 579 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTGIAGYTLL 579 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccccceeEee
Confidence 45577888888887 799999998754 22 3478899988 6544 7665554554443
No 150
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=20.31 E-value=94 Score=28.97 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=23.3
Q ss_pred ceEeeCCccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCC
Q 020547 81 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 119 (325)
Q Consensus 81 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGN 119 (325)
+++|+||+|.+-- -.-+-..|-.||.+|.-.++++-|+
T Consensus 2 riLfiGDvvGk~G-r~~v~~~Lp~lk~kyk~dfvI~N~E 39 (266)
T COG1692 2 RILFIGDVVGKPG-RKAVKEHLPQLKSKYKIDFVIVNGE 39 (266)
T ss_pred eEEEEecccCcch-HHHHHHHhHHHHHhhcCcEEEEcCc
Confidence 5789999986522 1223356667777776556665543
Done!