BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020557
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic
OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1
Length = 541
Score = 350 bits (899), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/314 (59%), Positives = 222/314 (70%), Gaps = 36/314 (11%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCG 60
+ +S S+ SPLCTW VAACMS + G D Q ++ + +R LS KC
Sbjct: 2 VGASSSYASPLCTWFVAACMSVSHGGGDSRQAVALQSGGRSRRRRQLS---------KCS 52
Query: 61 VGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNN 120
V SGS+ SIQ+L+ SCL F PC Y + +N SS FGSN
Sbjct: 53 VA------------SGSA-SIQALVTSCLDFGPCTHYNN---------NNALSSLFGSN- 89
Query: 121 STATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGH 180
+ +LNR QRRL NR SG AMAV ++ ++E KKP +Q+RVVVTGMG+ + LGH
Sbjct: 90 -SVSLNRNQRRL--NRAASSGGAMAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGH 145
Query: 181 EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240
+P FY NLL+G SGIS+IE FDC+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLL
Sbjct: 146 DPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLL 205
Query: 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300
TAGKKALADGG+T++VM E DK+KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPF
Sbjct: 206 TAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPF 265
Query: 301 ATTNMGSAMLAMDL 314
ATTNMGSAMLAMDL
Sbjct: 266 ATTNMGSAMLAMDL 279
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2
Length = 473
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 154 VTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAA 213
V+ K+ +KRVV+TGMGLVS G++ D +Y LL G SGIS I+ FD + FPT+
Sbjct: 50 VSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGG 109
Query: 214 EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
+I+ FS++G++ K +R+D + Y + AGKKAL + D +N +DK K GVL+G+G+
Sbjct: 110 QIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGM 169
Query: 274 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQY 324
GG+ VF + ++ L +++++PF +P+A TNMGSA+LA+D L L+ P Y
Sbjct: 170 GGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAID---LGLMGPNY 218
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Hordeum vulgare GN=KAS12 PE=1 SV=1
Length = 462
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 109/164 (66%), Gaps = 6/164 (3%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+KRVV+TGMGL S G + D FY+ LL G SG+ I+ FD +SFPT+ A +I+ FS++G+
Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGY 106
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGI--TEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K +R+D + Y + +GKKAL G+ D +LD + GVL+G+G+GG+ VF D
Sbjct: 107 IDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGGLSVFSD 166
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQY 324
++ L Y+K++PF +P+A TNMGSA+LA+D + + P Y
Sbjct: 167 GVQNLIEKGYRKISPFFIPYAITNMGSALLAID---VGFMGPNY 207
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis
(strain 168) GN=fabF PE=3 SV=1
Length = 413
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M +KRVVVTG+G +SPLG++ D +NN + GVSGI I D +P K+AAE+K F+ +
Sbjct: 1 MTKKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +++MD+F Y + A K A+ D + ++ +E+ + GV +GSG+GG++
Sbjct: 61 DYMDKKEARKMDRFTQYAVVAAKMAVEDADL--NITDEI-APRVGVWVGSGIGGLETLES 117
Query: 282 AIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDL 314
E L ++++PF VP +M + +++ L
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIAL 151
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1
Length = 414
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 6/161 (3%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAM--DLVSLNL 319
+AL S +K++PF +P A NM S M+++ DL N+
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNI 158
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabF PE=3 SV=3
Length = 414
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNM 305
+AL +K++PF VP NM
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNM 142
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi
GN=fabF PE=3 SV=2
Length = 415
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LLEG SGI IE FD T+F T+ A +K F
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCT 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ + E + ++ GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---ITEENAARVGVAIGSGIGGLDLIEA 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAM 312
AL +K++PF VP NM + L++
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSI 149
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MW2) GN=fabF PE=1 SV=1
Length = 414
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
+ L ++++PF VP +M + +++DL
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MSSA476) GN=fabF PE=3 SV=1
Length = 414
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
+ L ++++PF VP +M + +++DL
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|Q5HHA1|FABF_STAAC 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain COL) GN=fabF PE=1 SV=1
Length = 414
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
+ L ++++PF VP +M + +++DL
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1
Length = 416
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
Query: 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 220
++++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 3 NLEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDA 62
Query: 221 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 280
++ K +KRMD+F + + A ++A+ D + V+NEL+ + GVLIG+G+GG+KV
Sbjct: 63 TQFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLE 119
Query: 281 DAIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDL 314
D L + +PF +P NM S + A++L
Sbjct: 120 DQQTILLDKGPSRCSPFMIPMMIANMASGLTAINL 154
>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain N315) GN=fabF PE=1 SV=1
Length = 414
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +N+ + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INDNTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
+ L ++++PF VP +M + +++DL
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|Q99VA6|FABF_STAAM 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1
Length = 414
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +N+ + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INDNTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
+ L ++++PF VP +M + +++DL
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MRSA252) GN=fabF PE=3 SV=1
Length = 414
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVA 225
RVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ + +
Sbjct: 6 RVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHID 65
Query: 226 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEA 285
K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A +
Sbjct: 66 KKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIAHKQ 122
Query: 286 L-RISYKKMNPFCVPFATTNMGSAMLAMDL 314
L ++++PF VP +M + +++DL
Sbjct: 123 LMDKGPRRVSPFFVPMLIPDMATGQVSIDL 152
>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment)
OS=Staphylococcus aureus GN=fabF PE=3 SV=1
Length = 403
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 168 VVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK 227
V+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ + + K
Sbjct: 1 VITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKK 60
Query: 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL- 286
++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A + L
Sbjct: 61 EARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIAHKQLM 117
Query: 287 RISYKKMNPFCVPFATTNMGSAMLAMDL 314
++++PF VP +M + +++DL
Sbjct: 118 DKGPRRVSPFFVPMLIPDMATGQVSIDL 145
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti
(strain 1021) GN=fabF PE=3 SV=2
Length = 421
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------S 217
+RVV+TG G+VSPLG +V + LL G + ++ F+ P KIA I +
Sbjct: 2 RRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDGT 61
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
F+ D W+ PK +++D F++Y + A ALAD G + ++ D+ GVLIGSG+GG++
Sbjct: 62 FNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPE--SDEDQISTGVLIGSGIGGLE 119
Query: 278 VFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAM 312
DA LR ++++PF +P N+ + +++
Sbjct: 120 GIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSI 155
>sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri
GN=fabF PE=3 SV=2
Length = 413
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGG--ITED 255
++ K ++MD F+ Y + AG +A+ D G ITE+
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
(strain K12) GN=fabF PE=1 SV=2
Length = 413
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGG--ITED 255
++ K ++MD F+ Y + AG +A+ D G ITE+
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
>sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3
SV=2
Length = 413
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGG--ITED 255
++ K ++MD F+ Y + AG +A+ D G ITE+
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
>sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=fabF PE=3 SV=2
Length = 413
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGG--ITED 255
++ K ++MD F+ Y + AG +A+ D G ITE+
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
>sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos
taurus GN=OXSM PE=2 SV=1
Length = 460
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK------S 217
++RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA +
Sbjct: 42 RRRVVITGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGCDEGQ 101
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
F+ +V +K M + + A + AL D G +E D++ GV IG G+ ++
Sbjct: 102 FNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQ--SEADQAATGVAIGMGMVPLE 159
Query: 278 VFYD-AIEALRISYKKMNPFCVPFATTNMGSAMLAM 312
V + A+ Y K++PF VP NM S +++
Sbjct: 160 VISETALTFQTKGYSKVSPFFVPKILVNMASGQVSI 195
>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus
musculus GN=Oxsm PE=2 SV=1
Length = 459
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK----- 216
M ++RVV+TG+GLV+PLG + ++ LL G SGI + + + P +AA +
Sbjct: 39 MLRRRVVITGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYKNIPCSVAAYVPRGPHE 98
Query: 217 -SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
F+ + +V+ +K M + + A + AL D G E D+ GV IG G+
Sbjct: 99 GQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPK--READQVATGVAIGMGMVP 156
Query: 276 MKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAM 312
++V + + Y K++PF VP NM + +++
Sbjct: 157 LEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSI 194
>sp|P16539|KAS2_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces glaucescens GN=tcmL PE=3 SV=2
Length = 409
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAP 226
VVVTG+G+V+P G + ++ L G SGI I+ FD +P ++ E+ +F +
Sbjct: 7 VVVTGLGIVAPNGTGTEEYWAATLAGKSGIDVIQRFDPHGYPVRVGGEVLAFDAAAHLPG 66
Query: 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
+L + D+ + L A + ALAD G+ + + D+ GVL +G GG +
Sbjct: 67 RLLPQTDRMTQHALVAAEWALADAGLEPE---KQDEYGLGVLTAAGAGGFE 114
>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo
sapiens GN=OXSM PE=1 SV=1
Length = 459
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG- 222
+RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA + S +G
Sbjct: 41 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 100
Query: 223 -----WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
+V+ K M + + A + A+ D G +E D+ GV IG G+ ++
Sbjct: 101 FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 158
Query: 278 VFYD-AIEALRISYKKMNPFCVPFATTNMGSAMLAM 312
V + A+ Y K++PF VP NM + +++
Sbjct: 159 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSI 194
>sp|P23155|KAS1_STRCO Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5318 PE=3 SV=1
Length = 423
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RV VTG+G+V+P G F+ L EG + I FD + ++IAAE +D
Sbjct: 1 MTRRRVAVTGIGVVAPGGIGTPQFWRLLSEGRTATRRISLFDPSGLRSQIAAECDFEPSD 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
+ ++R D+++ + L A +A+ D + MN D + G +G+ +GG
Sbjct: 61 HGLGLATAQRCDRYVQFALVAASEAVRDANLD---MNREDPWRAGATLGTAVGG 111
>sp|P16540|KAS1_STRVN Granaticin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1
Length = 421
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+ +P G F++ L G + I FD + F ++IA EI +
Sbjct: 3 RRVVITGVGVRAPGGSGTKEFWDLLTAGRTATRPISFFDASPFRSRIAGEIDFDAVAEGF 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
+P+ +RMD+ + + + ALAD G+ LD S+ GV +GS +
Sbjct: 63 SPREVRRMDRATQFAVACTRDALADSGLD---TGALDPSRIGVALGSAV 108
>sp|P43678|KAS1_STRRM Oxytetracycline polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces rimosus PE=3 SV=2
Length = 425
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 165 KRVVVTGMGLVSP--LGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+RVV+TG+G+V+P +G +P F+ L G + I +FD + F +++AAE
Sbjct: 8 RRVVITGIGVVAPGDVGTKP--FWEMLTAGRTATRPISSFDASPFRSQVAAECDFDPAAE 65
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274
++ + + D+ M + A ++ALAD G+T E D + GV+ G+ G
Sbjct: 66 GLSQRQVRAWDRTMQFAYVAAREALADSGVT----GEADPLRTGVMAGTACG 113
>sp|Q05357|KAS2_STRHA Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
halstedii GN=sch2 PE=3 SV=1
Length = 414
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+R VVTG+G+V+P G + F+ ++G S ++ I+ C P KIA ++ F +
Sbjct: 5 RRAVVTGLGVVAPHGIGAETFWKTAVDGTSSLARIDREGCGHLPLKIAGQVPDFDPAALI 64
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
+ D+F + + A + AL D ++ ++ GV+ +G GG
Sbjct: 65 EDTYLVQTDRFTHFAMAATQLALDDARLSRADIDS--PYSVGVVTAAGSGG 113
>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CEM1 PE=1
SV=1
Length = 442
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC---------TSFPTKI-AAE 214
+RVV+TG+G V+PLG + NLL +G++ I + S P+ I +
Sbjct: 3 RRVVITGLGCVTPLGRSLSESWGNLLSSKNGLTPITSLPNYNEDYKLREKSIPSTITVGK 62
Query: 215 I-KSFSTDGWVAPKL------SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC-- 265
I ++F + KL +R F+ L +AL + G+ ++ S C
Sbjct: 63 IPENFQNENSAINKLLFTSQDERRTSSFIKLALRTTYEALHNAGLLNPNDITINTSLCNL 122
Query: 266 ---GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312
G LIGSG+G ++ Y K++NP+ VP TNM + +++
Sbjct: 123 DHFGCLIGSGIGSIQDIYQTSLQFHNDNKRINPYFVPKILTNMAAGNVSI 172
>sp|Q02578|KAS1_STRCN Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cyaneus GN=curA PE=3 SV=1
Length = 422
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RV VTG+G+V+P G F++ L G + I FD ++IAAE +
Sbjct: 3 RRVAVTGIGVVAPGGIGVPAFWDLLSSGRTATRGITLFDPEGLRSRIAAECDFDPLAHGL 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
P+L +R D+++ + L A +A+ D GI N + V +GS +GG
Sbjct: 63 DPELVERADRYIQFALVAADEAVTDSGIDFGTENPW---RVAVSLGSAVGG 110
>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.13c PE=3 SV=1
Length = 426
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETF-DCTSFPTKIAA------EIKS 217
KRVV+TG+G V+PLG+ + NL++G SGI ++ F + P+K+A E +
Sbjct: 2 KRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPEYEQIPSKVAGVIPRGKEKEE 61
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 276
++ +V + + F LT+ +AL D + ++E +K GV G+G+G +
Sbjct: 62 WNVLDYVDQGKLREVATFTQLALTSAAEALKDARWID--IDEQEKLATGVCFGTGIGNL 118
>sp|Q05356|KAS1_STRHA Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
halstedii GN=sch1 PE=3 SV=1
Length = 422
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G+V+P G F++ L G + I FD ++IAAE + +
Sbjct: 3 RRVVVTGIGVVAPGGIGAARFWDLLAGGRTATRRISLFDPARLRSQIAAECDFDPSAHGL 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
+ +R D+++ + L A +A+ D G+ D E D + G ++G+ +GG
Sbjct: 63 DDETVRRCDRYVQFALVATAEAVRDAGL--DTTRE-DPWRMGAVLGTAVGG 110
>sp|P23156|KAS2_STRCO Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5317 PE=3 SV=1
Length = 424
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+R VVTG+G++SP G + + + +G S + + C P ++A E+ F V
Sbjct: 14 RRAVVTGLGVLSPHGTGVEAHWKAVADGTSSLGPVTREGCAHLPLRVAGEVHGFDAAETV 73
Query: 225 APKLSKRMDKFMLYLLTAGKKALAD 249
+ + D+F + L+A + ALAD
Sbjct: 74 EDRFLVQTDRFTHFALSATQHALAD 98
>sp|P16538|KAS1_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1
Length = 426
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+KRVV+TG+G+ +P G F++ L G + I FD + ++IA EI
Sbjct: 6 EKRVVITGIGVRAPGGAGTAAFWDLLTAGRTATRTISLFDAAPYRSRIAGEIDFDPIGEG 65
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274
++P+ + D+ + ++AL D G+ +N + GV IG+ +G
Sbjct: 66 LSPRQASTYDRATQLAVVCAREALKDSGLDPAAVN---PERIGVSIGTAVG 113
>sp|Q02059|KASA_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5087 PE=1 SV=2
Length = 467
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 151 DEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTK 210
D K+ ++RVV+TG+G+ +P G+ F+ L G + I FD + + ++
Sbjct: 32 DHRTNASKELFGLKRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQ 91
Query: 211 IAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIG 270
+AAE P+ RMD+ + + ++A A G+ D LD ++ GV +G
Sbjct: 92 VAAEADFDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLG 148
Query: 271 SGL 273
S +
Sbjct: 149 SAV 151
>sp|P16541|KAS2_STRVN Granaticin polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces violaceoruber GN=gra-orf2 PE=3 SV=2
Length = 415
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
++R VVTG+ + +P G + ++ +LL G +GI+E+ FD + +P+++A +I F
Sbjct: 6 RRRAVVTGLSVAAPGGLGTERYWKSLLTGENGIAELSRFDASRYPSRLAGQIDDFEASEH 65
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 276
+ +L + D Y L A ALAD G+ + + LD GV+ + GG
Sbjct: 66 LPSRLLPQTDVSTRYALAAADWALADAGVGPE--SGLDDYDLGVVTSTAQGGF 116
>sp|P0A953|FABB_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
(strain K12) GN=fabB PE=1 SV=1
Length = 406
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG--MKVF-YD 281
K+ + M +Y + ++A+AD G++ + + + G++ GSG G +VF D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ--NNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLA 311
A+ R K + P+ V A + SA LA
Sbjct: 119 AMRGPR-GLKAVGPYVVTKAMASGVSACLA 147
>sp|P0A954|FABB_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabB PE=3
SV=1
Length = 406
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG--MKVF-YD 281
K+ + M +Y + ++A+AD G++ + + + G++ GSG G +VF D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ--NNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLA 311
A+ R K + P+ V A + SA LA
Sbjct: 119 AMRGPR-GLKAVGPYVVTKAMASGVSACLA 147
>sp|Q02579|KAS2_STRCN Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
cyaneus GN=curB PE=3 SV=1
Length = 419
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
++ +R VTG+G+V+P G D ++ ++ EG S + I C P ++A E++ F
Sbjct: 8 IRTRRTAVTGIGVVAPNGLHADTYWKSVKEGASVLDRITREGCEHLPLRVAGEVRGFDPS 67
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
+ + D F + L A AL D G+T+ GV+ +G GG
Sbjct: 68 ALIEETFLVQTDLFTHFALAAADAALQDAGLTKAAAVADSPYSVGVVTAAGSGG 121
>sp|P72331|NODE_RHIS3 Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3
SV=1
Length = 402
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TG+G + LG + + + EG S I I T + I AEIK+
Sbjct: 2 DRRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLPEHDI 61
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+L MD+F L + A ++A+ G++ D E + + G ++G G G ++AI
Sbjct: 62 DRKQLVT-MDRFSLLAVLAAREAMRQAGLSCD---ERNAYRFGAIVGVGGSG----WEAI 113
Query: 284 EALRISYKKM 293
EA SY+ +
Sbjct: 114 EA---SYRAL 120
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabB PE=3 SV=1
Length = 406
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+R V+TG G++S +G+ + +L G SGI + F + + +A IK + +
Sbjct: 2 RRTVITGFGIISSIGNNKEEVLASLKAGKSGIEVVPEFVEMNMRSHVAGTIK-LNPSEHI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK---VFYD 281
K+ + M Y + ++A+ D G+TED ++ + G++IG+G G V D
Sbjct: 61 DRKVFRFMGDAAAYAYLSMREAIEDAGLTED---QVSNDRTGLVIGAGTGSAHNQLVACD 117
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLA 311
A+ R K + P+ V + SA LA
Sbjct: 118 AVRGPR-GVKAIGPYAVTKTMASSVSACLA 146
>sp|P41175|KAS1_STRCM Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cinnamonensis PE=3 SV=1
Length = 420
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M Q+RV +TG+ +++P G F+ L EG + I FD F +K+AAE +
Sbjct: 1 MTQRRVAITGIEVLAPGGLGRKEFWQLLSEGRTATRGITFFDPAPFRSKVAAEADFCGLE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274
++P+ +RMD+ + + +A+ D G + + GV++GS +G
Sbjct: 61 NGLSPQEVRRMDRAAQFAVVTA-RAVEDSGAE---LAAHPPHRIGVVVGSAVG 109
>sp|Q02062|KASB_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5088 PE=1 SV=1
Length = 407
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAP 226
V++TG+G+V+P G +++ +L+G G+ + FD + +P +A +I F +
Sbjct: 3 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 62
Query: 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
+L + D LTA AL D + + + D GV+ + GG
Sbjct: 63 RLLPQTDPSTRLALTAADWALQDAKADPESLTDYD---MGVVTANACGGFD 110
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Arabidopsis thaliana GN=KAS PE=1 SV=1
Length = 461
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 123 ATLNRRQR----RLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPL 178
AT N R+ RLRLNR ++T H +RVVVTG+G+V+PL
Sbjct: 2 ATSNLRRHLSASRLRLNRF----------------ISTSSSYH-SHRRVVVTGLGMVTPL 44
Query: 179 GHEPDVFYNNLLEGVSGI----------------SEIETFDCTSFPTKIAAEIKSFSTDG 222
G + + L++G GI +++ TFD S +K+AA + S G
Sbjct: 45 GRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLS--SKVAAFVPYGSNPG 102
Query: 223 WVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF 279
L SK + F+ Y + A +AL D E +++ + G
Sbjct: 103 EFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGI-----GSI 157
Query: 280 YDAIEALRI----SYKKMNPFCVPFATTNMGSAMLAM 312
D +EA ++ ++++PF +P NM S ++M
Sbjct: 158 CDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSM 194
>sp|Q89AY4|FABB_BUCBP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=fabB PE=3 SV=1
Length = 407
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVV+TG+G++S +G+ +LLE SGIS + + + + + IK + +
Sbjct: 2 KRVVITGLGIISSIGNNKIEVLTSLLETKSGISFSKEMERSGMRSHVWGNIKLDNYQENI 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K+ + M+ +Y + K+A+ D +T + + + GV+IGS G + + +
Sbjct: 62 DRKIFRFMNDASIYSYLSMKQAIEDAKLTSKMYQ--NNPRVGVIIGSSSGSPRCQINGVS 119
Query: 285 ALRIS--YKKMNPFCVPFATTNMGSAMLA 311
++ + K ++P+ V + T+ SA L+
Sbjct: 120 IIKKTKRLKSVSPYTVIKSMTSSISACLS 148
>sp|P06230|NODE_RHIME Nodulation protein E OS=Rhizobium meliloti (strain 1021) GN=nodE
PE=3 SV=1
Length = 402
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TGMG + LG + + + EG S I + + + AE+K+ D
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWMREGRSAIGPLLNTELHGLKGIVGAEVKALP-DHN 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+ + + A +A+ G++ NE + + G +G GLGG +DA
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGG----WDAT 113
Query: 284 E 284
E
Sbjct: 114 E 114
>sp|P04684|NODE_RHILT Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii
GN=nodE PE=3 SV=2
Length = 401
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TG+G + LG + + EG S IS I T D + EIK+
Sbjct: 2 DRRVVITGIGGLCGLGTNAASIWKEMREGPSAISPIITTDLYDLEGTVGLEIKAIPEHD- 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+F L + A +A+ G++ D E + + G +G G G +D I
Sbjct: 61 IPRKQLVSMDRFSLLAVIAATEAMKQAGLSCD---EQNAHRFGAAMGLGGPG----WDTI 113
Query: 284 E 284
E
Sbjct: 114 E 114
>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3
SV=1
Length = 406
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+VS +G+ +L +GVSGI E + + IK S + +
Sbjct: 2 RRVVITGIGIVSSIGNNKKEVLASLYKGVSGIVSSEEMKKLGMRSAVWGNIKLESIN-II 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272
KLS+ M+ Y A +A+ D I + + + G++ GSG
Sbjct: 61 TQKLSRFMNNASRYSFVAMMEAIKDAKIDREYYQK--NPRVGLISGSG 106
>sp|Q8KA28|FABB_BUCAP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=fabB PE=3 SV=1
Length = 407
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVV+TG G++S +G+ N+L G+SGI+ E + +++ IK + +
Sbjct: 2 KRVVITGFGIISSIGNNKKEVLNSLYNGISGITFSEEMKESGMRSQVWGNIKLENKKFFK 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGI 252
K+S+ M+ +Y + ++A+ D +
Sbjct: 62 KNKISRFMNNGSIYAFLSMEQAIKDANL 89
>sp|P06231|NOE4_RHIML Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1
Length = 401
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TGMG + LG + + S I + + + AEIK+ D
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWSARRRSAIGPVLNTELHGLKGIVGAEIKALP-DHN 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+ + + A +A+ G++ NE + + G +G GLGG +DA
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGG----WDAT 113
Query: 284 E 284
E
Sbjct: 114 E 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,687,285
Number of Sequences: 539616
Number of extensions: 4661621
Number of successful extensions: 11537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 11427
Number of HSP's gapped (non-prelim): 75
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)