Query 020557
Match_columns 324
No_of_seqs 207 out of 1217
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 03:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020557.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020557hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02787 3-oxoacyl-[acyl-carri 100.0 1.4E-49 3.1E-54 405.7 21.4 286 2-323 1-287 (540)
2 KOG1394 3-oxoacyl-(acyl-carrie 100.0 4.7E-33 1E-37 266.1 12.2 160 164-323 23-183 (440)
3 PRK08722 3-oxoacyl-(acyl carri 100.0 8.7E-29 1.9E-33 246.0 16.9 157 164-323 3-160 (414)
4 cd00832 CLF Chain-length facto 100.0 8.1E-28 1.8E-32 237.8 16.4 156 165-323 1-157 (399)
5 PRK07314 3-oxoacyl-(acyl carri 100.0 9.1E-28 2E-32 236.8 16.5 156 165-323 2-158 (411)
6 PRK09116 3-oxoacyl-(acyl carri 99.9 4.4E-27 9.4E-32 233.2 16.0 157 165-323 2-160 (405)
7 PRK06333 3-oxoacyl-(acyl carri 99.9 4.9E-27 1.1E-31 232.8 16.3 158 163-323 2-169 (424)
8 PRK08439 3-oxoacyl-(acyl carri 99.9 9.4E-27 2E-31 230.5 17.1 156 165-323 2-158 (406)
9 TIGR03150 fabF beta-ketoacyl-a 99.9 3E-26 6.5E-31 224.9 16.7 157 165-324 1-158 (407)
10 PRK07967 3-oxoacyl-(acyl carri 99.9 8.8E-26 1.9E-30 224.1 16.8 155 165-323 2-158 (406)
11 PLN02836 3-oxoacyl-[acyl-carri 99.9 1.4E-25 2.9E-30 224.4 15.1 157 162-323 3-180 (437)
12 PF00109 ketoacyl-synt: Beta-k 99.9 5.2E-26 1.1E-30 209.1 10.5 153 164-323 1-172 (254)
13 PRK07103 polyketide beta-ketoa 99.9 2.3E-25 5.1E-30 220.8 15.6 154 165-323 2-163 (410)
14 COG3321 Polyketide synthase mo 99.9 8.1E-26 1.8E-30 246.4 10.6 148 167-323 6-170 (1061)
15 cd00834 KAS_I_II Beta-ketoacyl 99.9 9.7E-25 2.1E-29 213.7 16.4 157 165-324 1-158 (406)
16 PRK07910 3-oxoacyl-(acyl carri 99.9 9.3E-25 2E-29 217.5 16.0 153 164-323 11-167 (418)
17 TIGR02813 omega_3_PfaA polyket 99.9 1E-24 2.3E-29 252.0 14.8 155 165-323 7-202 (2582)
18 cd00828 elong_cond_enzymes "el 99.9 3.5E-23 7.6E-28 203.6 16.3 147 166-323 2-158 (407)
19 PRK06519 3-oxoacyl-(acyl carri 99.9 2.7E-23 5.9E-28 205.9 15.2 153 164-323 5-171 (398)
20 COG0304 FabB 3-oxoacyl-(acyl-c 99.9 2.4E-23 5.1E-28 206.8 14.4 155 164-323 2-158 (412)
21 cd00833 PKS polyketide synthas 99.9 8.6E-22 1.9E-26 193.5 13.3 150 166-324 2-167 (421)
22 smart00825 PKS_KS Beta-ketoacy 99.9 4.3E-21 9.4E-26 189.6 13.0 149 167-324 1-167 (424)
23 PRK09185 3-oxoacyl-(acyl carri 99.8 6.4E-20 1.4E-24 181.0 16.2 151 164-323 1-156 (392)
24 PTZ00050 3-oxoacyl-acyl carrie 99.8 3.6E-20 7.8E-25 184.4 13.5 145 174-324 1-165 (421)
25 PRK05952 3-oxoacyl-(acyl carri 99.8 7.8E-20 1.7E-24 180.3 13.1 138 164-323 1-142 (381)
26 PRK06501 3-oxoacyl-(acyl carri 99.8 2.6E-18 5.6E-23 171.5 15.0 150 164-323 10-171 (425)
27 KOG1202 Animal-type fatty acid 99.7 1.6E-18 3.4E-23 183.8 6.0 150 164-323 10-166 (2376)
28 PRK14691 3-oxoacyl-(acyl carri 99.2 9.9E-11 2.1E-15 114.3 9.2 86 232-323 1-87 (342)
29 cd00825 decarbox_cond_enzymes 98.4 7.6E-07 1.7E-11 84.7 7.9 82 235-323 11-92 (332)
30 PF13723 Ketoacyl-synt_2: Beta 98.2 8.9E-06 1.9E-10 75.1 8.9 90 222-323 21-110 (218)
31 PRK06147 3-oxoacyl-(acyl carri 98.1 1.5E-05 3.3E-10 77.9 10.9 94 164-272 2-95 (348)
32 cd00327 cond_enzymes Condensin 94.9 0.075 1.6E-06 48.4 6.7 58 235-324 7-65 (254)
33 PRK07515 3-oxoacyl-(acyl carri 89.8 2.4 5.2E-05 41.6 9.8 32 234-272 94-125 (372)
34 PRK09352 3-oxoacyl-(acyl carri 87.6 3.6 7.9E-05 39.0 9.2 81 165-273 2-83 (319)
35 PRK08256 lipid-transfer protei 80.2 3.3 7.3E-05 41.1 5.6 35 234-271 21-55 (391)
36 PRK06064 acetyl-CoA acetyltran 78.5 2.8 6.2E-05 41.5 4.5 34 235-275 22-55 (389)
37 PLN03172 chalcone synthase fam 78.4 8.4 0.00018 38.6 7.8 101 166-274 16-134 (393)
38 TIGR00747 fabH 3-oxoacyl-(acyl 76.5 5.5 0.00012 37.8 5.7 32 235-273 51-82 (318)
39 PRK09258 3-oxoacyl-(acyl carri 75.9 24 0.00052 33.8 10.0 32 235-273 61-92 (338)
40 PF00108 Thiolase_N: Thiolase, 72.0 4.4 9.6E-05 38.2 3.8 32 236-274 27-58 (264)
41 PLN03168 chalcone synthase; Pr 71.6 12 0.00027 37.3 7.0 39 229-274 95-133 (389)
42 PRK06059 lipid-transfer protei 70.7 8.1 0.00017 38.5 5.5 19 236-254 24-42 (399)
43 COG0332 FabH 3-oxoacyl-[acyl-c 70.0 6.6 0.00014 38.5 4.6 22 234-255 51-72 (323)
44 cd00751 thiolase Thiolase are 67.4 10 0.00022 37.5 5.4 32 235-273 22-53 (386)
45 PRK07204 3-oxoacyl-(acyl carri 65.6 11 0.00023 36.1 5.0 33 235-274 52-84 (329)
46 PLN03173 chalcone synthase; Pr 64.2 18 0.00038 36.3 6.4 89 166-254 16-121 (391)
47 PLN03171 chalcone synthase-lik 63.8 26 0.00057 35.1 7.5 37 232-275 105-141 (399)
48 PRK05656 acetyl-CoA acetyltran 62.9 13 0.00029 37.0 5.3 31 236-273 27-57 (393)
49 PRK07108 acetyl-CoA acetyltran 60.2 17 0.00036 36.4 5.4 33 235-274 27-59 (392)
50 PLN03170 chalcone synthase; Pr 56.4 30 0.00064 34.8 6.5 102 166-274 20-138 (401)
51 PRK06366 acetyl-CoA acetyltran 56.0 22 0.00048 35.3 5.5 31 235-272 26-56 (388)
52 cd00829 SCP-x_thiolase Thiolas 54.6 25 0.00053 34.3 5.5 33 235-274 16-48 (375)
53 PLN03169 chalcone synthase fam 54.1 73 0.0016 31.8 8.8 21 234-254 105-125 (391)
54 TIGR01930 AcCoA-C-Actrans acet 49.4 32 0.0007 34.1 5.4 32 235-273 21-52 (386)
55 PRK08170 acetyl-CoA acetyltran 49.2 37 0.0008 34.3 5.9 31 236-273 28-58 (426)
56 cd00830 KAS_III Ketoacyl-acyl 48.6 28 0.00061 32.7 4.7 33 235-274 50-82 (320)
57 PRK06205 acetyl-CoA acetyltran 46.3 38 0.00082 33.9 5.4 33 236-275 27-59 (404)
58 PRK12879 3-oxoacyl-(acyl carri 43.9 34 0.00074 32.4 4.5 20 235-254 53-72 (325)
59 PRK06289 acetyl-CoA acetyltran 41.7 26 0.00056 35.0 3.4 30 236-272 27-56 (403)
60 PRK07851 acetyl-CoA acetyltran 39.3 51 0.0011 33.1 5.1 30 236-272 28-58 (406)
61 cd00831 CHS_like Chalcone and 38.8 1.1E+02 0.0024 29.7 7.2 27 228-254 78-104 (361)
62 PRK05790 putative acyltransfer 38.8 29 0.00062 34.4 3.2 30 235-271 26-55 (393)
63 PRK07516 acetyl-CoA acetyltran 37.7 37 0.00081 33.6 3.8 31 236-273 23-53 (389)
64 cd00827 init_cond_enzymes "ini 37.3 68 0.0015 30.2 5.4 33 235-274 48-80 (324)
65 PRK06840 hypothetical protein; 36.8 73 0.0016 30.5 5.6 20 235-254 53-72 (339)
66 PRK12578 acetyl-CoA acetyltran 33.5 48 0.001 32.7 3.8 32 235-273 21-52 (385)
67 PRK07937 lipid-transfer protei 31.8 52 0.0011 32.5 3.7 20 236-255 25-44 (352)
68 TIGR00748 HMG_CoA_syn_Arc hydr 31.3 51 0.0011 32.1 3.5 34 235-275 50-83 (345)
69 PRK06157 acetyl-CoA acetyltran 31.2 45 0.00097 33.3 3.2 30 236-272 28-57 (398)
70 PRK12880 3-oxoacyl-(acyl carri 30.4 66 0.0014 31.6 4.1 35 234-275 59-93 (353)
71 PRK06065 acetyl-CoA acetyltran 29.5 50 0.0011 33.0 3.2 29 236-271 30-58 (392)
72 PRK06158 thiolase; Provisional 29.0 53 0.0011 32.6 3.2 30 236-272 29-58 (384)
73 PRK06445 acetyl-CoA acetyltran 28.7 52 0.0011 32.7 3.2 31 236-273 33-63 (394)
74 PRK08313 acetyl-CoA acetyltran 28.6 54 0.0012 32.6 3.2 29 236-271 25-53 (386)
75 KOG3308 Uncharacterized protei 28.1 58 0.0013 30.3 3.0 40 165-204 2-42 (225)
76 PRK07801 acetyl-CoA acetyltran 26.1 62 0.0013 32.0 3.1 20 236-255 27-46 (382)
77 PLN02326 3-oxoacyl-[acyl-carri 26.1 92 0.002 30.7 4.3 20 235-254 96-115 (379)
78 PRK08963 fadI 3-ketoacyl-CoA t 24.9 1.5E+02 0.0032 30.0 5.6 31 236-273 30-60 (428)
79 PRK05963 3-oxoacyl-(acyl carri 24.7 1.1E+02 0.0023 29.1 4.4 34 235-275 52-85 (326)
80 PRK04262 hypothetical protein; 24.5 79 0.0017 30.7 3.5 34 235-275 51-84 (347)
81 PTZ00455 3-ketoacyl-CoA thiola 24.5 76 0.0016 32.3 3.5 31 236-273 49-81 (438)
82 PRK06633 acetyl-CoA acetyltran 24.1 1.6E+02 0.0034 29.6 5.6 32 236-274 28-59 (392)
83 PLN02644 acetyl-CoA C-acetyltr 23.6 74 0.0016 31.7 3.2 29 236-271 26-54 (394)
84 PLN02287 3-ketoacyl-CoA thiola 22.3 85 0.0018 32.2 3.3 31 236-273 72-102 (452)
85 PRK07661 acetyl-CoA acetyltran 22.1 1.8E+02 0.0039 29.1 5.5 31 236-273 28-58 (391)
86 PRK09051 beta-ketothiolase; Pr 21.7 89 0.0019 31.2 3.3 31 236-273 28-58 (394)
87 PRK08235 acetyl-CoA acetyltran 20.9 97 0.0021 30.9 3.4 31 236-273 27-57 (393)
88 PLN02377 3-ketoacyl-CoA syntha 20.2 2.5E+02 0.0054 29.3 6.3 25 230-254 167-191 (502)
89 PF11248 DUF3046: Protein of u 20.1 46 0.00099 25.1 0.6 28 166-193 25-57 (63)
90 PRK06365 acetyl-CoA acetyltran 20.0 95 0.0021 31.4 3.1 20 236-255 38-57 (430)
No 1
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=100.00 E-value=1.4e-49 Score=405.71 Aligned_cols=286 Identities=72% Similarity=1.114 Sum_probs=240.6
Q ss_pred CCcccccchhHHHHHHHhhhcccCCCCCCCCCcccccccccccccchHHHHhhhhh-hcCCCCcccCCccccccCCCcch
Q 020557 2 ASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSA-KCGVGGEVVNGSLVSSFSGSSHS 80 (324)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 80 (324)
|+++++++||||||||||||++|+++.++..... +..+| .+|||.+. .| +..|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~---------------~~~~~~ 56 (540)
T PLN02787 1 MASASAASPLCTWLVAACMSVSCAGEDAHQAVAL--------QSGGR-SRRRRKRRKCS---------------SASGSA 56 (540)
T ss_pred CcccccchhHHHHHHHHHhhhhhccCCCcccccc--------ccccc-cchhhhhhhhc---------------cccccc
Confidence 6889999999999999999999998887544432 22333 22222221 11 224666
Q ss_pred hhhhhhccCCCCCccccccccccccccCCCCccccccCCCcchhhhHHHhhhhcccccCcccccccccCCCccccccCCC
Q 020557 81 IQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKP 160 (324)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~f~~~~~~~~~~~~~~r~~~~r~~~s~~~~a~~~~p~~~~~~~~~~ 160 (324)
++.+ ..||.+|||++|+++ |+++ ..+||+.++.+ .++++|| .++...+++++++.++|..+..+++++
T Consensus 57 ~~~~-~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (540)
T PLN02787 57 SILV-TSCLAFGPCTHYNSS------GGNA-LSSLFGSNSVS--LNRNQRR--RNRAARSGKAMAVAVQPEKEVETKKKP 124 (540)
T ss_pred hhhc-cchhcccchhhcccc------cccc-ccccccCCCcc--ccccccc--ccccCCCcccceeccCcccccccccCC
Confidence 6654 469999999999987 3333 34679999887 8899999 999999999999999998777777777
Q ss_pred CCCCCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHH
Q 020557 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (324)
Q Consensus 161 ~~~~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL 240 (324)
+++.+||||||||+++|+|.++|+||++|++|+++|+++++|+...++++++|+|++|++..|+++++.++||++++|++
T Consensus 125 ~~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al 204 (540)
T PLN02787 125 LTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLL 204 (540)
T ss_pred CCCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHH
Confidence 66778999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHHHHHHhCCCCcc
Q 020557 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLL 320 (324)
Q Consensus 241 ~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs 320 (324)
.+++|||+||||+++.++.+++.|+||++|++.|++..+++.++.+....++++|+.++..+.|+.+++|++.||++||+
T Consensus 205 ~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~ 284 (540)
T PLN02787 205 TAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPN 284 (540)
T ss_pred HHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCCCc
Confidence 99999999999975322356788999999999999998888877776667788999999999999999999999999999
Q ss_pred ccc
Q 020557 321 FPQ 323 (324)
Q Consensus 321 ~TV 323 (324)
+||
T Consensus 285 ~ti 287 (540)
T PLN02787 285 YSI 287 (540)
T ss_pred ccc
Confidence 987
No 2
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-33 Score=266.07 Aligned_cols=160 Identities=38% Similarity=0.609 Sum_probs=151.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
++||||||||++||+|++++++|++|++|++||+.++.+|...+|+.++|+|+.|+...|+++...++|+.+.+|+|.|+
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
.|||+||||.++.+++.+..++||.||+++|+++.+.+..+.+.+ ++++++||++|..+.||.+++||+.|||+||+++
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs 182 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS 182 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence 999999999876566778999999999999999999887777764 6999999999999999999999999999999998
Q ss_pred c
Q 020557 323 Q 323 (324)
Q Consensus 323 V 323 (324)
|
T Consensus 183 v 183 (440)
T KOG1394|consen 183 V 183 (440)
T ss_pred h
Confidence 6
No 3
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.96 E-value=8.7e-29 Score=245.97 Aligned_cols=157 Identities=36% Similarity=0.583 Sum_probs=144.6
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
.+||||||||+++|+|.++++||++|++|+++|+++++|+...++.+++|+|++||+.+|+++++.+.||+++++++.++
T Consensus 3 ~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
+|||+||||+.+ ..+..|+||++|++.+++..++++++.+.+ +...++|++++..++|+++++|++.||++||++|
T Consensus 83 ~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~t 159 (414)
T PRK08722 83 IQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIA 159 (414)
T ss_pred HHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCccc
Confidence 999999999752 456789999999999999988887776543 5567899999999999999999999999999999
Q ss_pred c
Q 020557 323 Q 323 (324)
Q Consensus 323 V 323 (324)
|
T Consensus 160 i 160 (414)
T PRK08722 160 I 160 (414)
T ss_pred c
Confidence 7
No 4
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.95 E-value=8.1e-28 Score=237.81 Aligned_cols=156 Identities=23% Similarity=0.371 Sum_probs=142.1
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
+||||||||+++|+|.++++||++|++|+++|+++++|+...++.+++|+|++||+.+++++++.++|||+++|++.+++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~ 80 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD 80 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988899999999999998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
|||+||||+++ .++..|+||++|++.|++...+..+..+.. +...++|+.++..+.|.++++|++.||++||++||
T Consensus 81 eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti 157 (399)
T cd00832 81 WALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV 157 (399)
T ss_pred HHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence 99999999863 567789999999999999877776665543 45677888888889999999999999999999997
No 5
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=9.1e-28 Score=236.80 Aligned_cols=156 Identities=37% Similarity=0.643 Sum_probs=144.7
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
++|||||||+++|+|.++++||++|++|+++|+++++|+..+++..++|+|++||+..|+++++.++|||+++|++.+++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 81 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAAK 81 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988999999999999999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
+||+||||++ ++++..++||++|++.+++..+++++..+.+ +...+.|+.++..+.|..+++|++.||++||+++|
T Consensus 82 ~Al~dAGl~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~tv 158 (411)
T PRK07314 82 QAVEDAGLEI---TEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSI 158 (411)
T ss_pred HHHHHcCCCc---ccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCccccc
Confidence 9999999986 3678899999999999999988888876654 45667888888999999999999999999999987
No 6
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=4.4e-27 Score=233.20 Aligned_cols=157 Identities=23% Similarity=0.280 Sum_probs=140.0
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCC-CCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC-TSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~-~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
+||||||||+++|+|.++|+||++|++|+++|+++++|+. ..++++++|+|++||+..++++++.++||+.++|++.++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~aa 81 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRAS 81 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999875 578899999999999888889999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
+|||+||||..+ ...+..|+||++|++.|+++.++++++.+.+ +...++++.++..++|.++++|++.||++||++|
T Consensus 82 ~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~t 159 (405)
T PRK09116 82 ELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIP 159 (405)
T ss_pred HHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCccc
Confidence 999999999532 2346689999999999999887777666554 4456788888899999999999999999999999
Q ss_pred c
Q 020557 323 Q 323 (324)
Q Consensus 323 V 323 (324)
|
T Consensus 160 i 160 (405)
T PRK09116 160 T 160 (405)
T ss_pred c
Confidence 7
No 7
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=4.9e-27 Score=232.84 Aligned_cols=158 Identities=35% Similarity=0.645 Sum_probs=143.0
Q ss_pred CCCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCC--------CCCCCCCChhhhhcCCH
Q 020557 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS--------FSTDGWVAPKLSKRMDK 234 (324)
Q Consensus 163 ~~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~d--------Fd~~~~Isp~ear~mDp 234 (324)
.+++|||||||+++|+|.++++||++|++|+++|++++.|+...++++++|+|++ ||+..|+++++.+.|||
T Consensus 2 ~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d~ 81 (424)
T PRK06333 2 NKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMDR 81 (424)
T ss_pred CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcCH
Confidence 3578999999999999999999999999999999999998888889999999987 88888899999999999
Q ss_pred hHHHHHHHHHHHHHhCCCCccccccc-CCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHH
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNEL-DKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAM 312 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~-~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~ 312 (324)
+++|++.++++||+||||+++ .+ +..|+||++|++.+++..+++.+..+. .+...++|+.++..+.|+++++|++
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~---~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 158 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPD---TLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI 158 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCcc---ccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHH
Confidence 999999999999999999763 33 678999999999999988877776654 3556788999999999999999999
Q ss_pred HhCCCCccccc
Q 020557 313 DLVSLNLLFPQ 323 (324)
Q Consensus 313 ~lGl~GPs~TV 323 (324)
.|||+||+++|
T Consensus 159 ~~gl~Gp~~~v 169 (424)
T PRK06333 159 RYGFKGPLGAP 169 (424)
T ss_pred HhCCCCCCccc
Confidence 99999999987
No 8
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=9.4e-27 Score=230.53 Aligned_cols=156 Identities=31% Similarity=0.524 Sum_probs=143.6
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
+||||||||+++|+|.++++||++|++|+++|+++++|+...+++.++|+|++||+..++++++.++||++.+|++.+++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~ 81 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999998999999999999999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
+||+||||++ .+++..++||++|++.+++..+++.+..+. ++.+.++|+.++..++|+++++|++.||++||+++|
T Consensus 82 ~AL~dAGl~~---~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~ 158 (406)
T PRK08439 82 EAMKDAGFLP---EELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS 158 (406)
T ss_pred HHHHHcCCCc---ccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence 9999999986 356788999999999999988777665544 456778999999999999999999999999999987
No 9
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.94 E-value=3e-26 Score=224.88 Aligned_cols=157 Identities=36% Similarity=0.675 Sum_probs=143.9
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
++|||||||+++|+|.++++||++|++|+++|+++++|+..+++..++|+|++||+.+|+++++.++|||++++++++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999998899999999999999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
+||+||||++ ++++..++||++|++.+++..+++++..+.+ +...++|+.++..+.|.++++|++.||++||+++|
T Consensus 81 ~Al~dAgl~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v 157 (407)
T TIGR03150 81 EAVEDSGLDI---EEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV 157 (407)
T ss_pred HHHHhcCCCc---ccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence 9999999986 3678899999999999999888877766553 45668888889999999999999999999999987
Q ss_pred C
Q 020557 324 Y 324 (324)
Q Consensus 324 ~ 324 (324)
.
T Consensus 158 ~ 158 (407)
T TIGR03150 158 V 158 (407)
T ss_pred c
Confidence 3
No 10
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.94 E-value=8.8e-26 Score=224.11 Aligned_cols=155 Identities=28% Similarity=0.451 Sum_probs=139.3
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
+||||||||+++|+|.++++||++|++|+++|+++++|+...++++++|+++ ||+..+++++..++||+..+|++.++.
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEcC-CChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998899999999984 888777888889999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH--hhccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~--~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
|||+||||.. ++....|+||++|++.+++....+.++.+. .+.+.++|+.++..++|+++++|++.||++||++|
T Consensus 81 ~Al~dAGl~~---~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~t 157 (406)
T PRK07967 81 QAIADAGLSE---EQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYS 157 (406)
T ss_pred HHHHHcCCCC---ccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccc
Confidence 9999999975 346778999999999998776666555444 35567899999999999999999999999999998
Q ss_pred c
Q 020557 323 Q 323 (324)
Q Consensus 323 V 323 (324)
|
T Consensus 158 v 158 (406)
T PRK07967 158 I 158 (406)
T ss_pred c
Confidence 7
No 11
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.93 E-value=1.4e-25 Score=224.38 Aligned_cols=157 Identities=27% Similarity=0.514 Sum_probs=132.1
Q ss_pred CCCCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCC--------------CCCCcceeeecC------CCCCC
Q 020557 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTD 221 (324)
Q Consensus 162 ~~~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~--------------~~~~~~~~G~I~------dFd~~ 221 (324)
.+.++|||||||+++|+|.++|+||++|++|+++|+++++++. .+++++++|+|+ +||+.
T Consensus 3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 82 (437)
T PLN02836 3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE 82 (437)
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence 3457899999999999999999999999999999999986542 356788899885 46766
Q ss_pred CCCChhhhhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCccccc
Q 020557 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPF 300 (324)
Q Consensus 222 ~~Isp~ear~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~ 300 (324)
+|+. .++||+..+|++.++++||+||||.+. ......++||++|++.|++..+++.++.+.+ +.+.++|+.++.
T Consensus 83 ~~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~--~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (437)
T PLN02836 83 LWLN---SRSSSRFIGYALCAADEALSDARWLPS--EDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPR 157 (437)
T ss_pred Hhcc---ccccCHHHHHHHHHHHHHHHHcCCCcc--cccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhh
Confidence 5532 467999999999999999999999752 1245689999999999998887776665543 456788999999
Q ss_pred ccChHHHHHHHHHhCCCCccccc
Q 020557 301 ATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 301 ~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
.+.|+++++||+.||++||++||
T Consensus 158 ~~~n~~a~~is~~~gl~Gp~~tv 180 (437)
T PLN02836 158 ILINMAAGHVSIRYGFQGPNHAA 180 (437)
T ss_pred hcccHHHHHHHHHhCCCCceece
Confidence 99999999999999999999997
No 12
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.93 E-value=5.2e-26 Score=209.07 Aligned_cols=153 Identities=32% Similarity=0.558 Sum_probs=117.0
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCC-CCCCCCC---CcceeeecCC----------CCCCCC-CChhh
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSF---PTKIAAEIKS----------FSTDGW-VAPKL 228 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~-rfd~~~~---~~~~~G~I~d----------Fd~~~~-Isp~e 228 (324)
|++|||||||+++|+|.++++||++|++|+++|++++ +|+...+ +..++|+|++ ||...+ +++++
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE 80 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence 4789999999999999999999999999999999998 6777666 5677777764 344433 66777
Q ss_pred hhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCC-ceEEEEcccCCchHHHHHHHHHHH-hh--ccCCCCcccccccCh
Q 020557 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS-KCGVLIGSGLGGMKVFYDAIEALR-IS--YKKMNPFCVPFATTN 304 (324)
Q Consensus 229 ar~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~-r~GV~vGt~~Gg~~~~~~~~~~l~-~~--~~~~~p~~~~~~l~n 304 (324)
.++||++++|++.++++||+|||+.++ .++.. |+||++|++.+++ +.+..+. .+ .....|+.+...++|
T Consensus 81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~---~~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 81 ARRMDRQSRLALAAAREALEDAGLDPD---DLDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp HHTS-HHHHHHHHHHHHHHHHHTSTGG---GHTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred hhhhhhhhhHHHHHhhhhccccccccc---ccccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence 889999999999999999999999863 34444 5999999999844 2233332 22 355666556666999
Q ss_pred HHHHHHHHHhCCCCccccc
Q 020557 305 MGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 305 ~iA~rVS~~lGl~GPs~TV 323 (324)
.++++||+.||++||++||
T Consensus 154 ~~a~~ia~~~gl~G~~~tv 172 (254)
T PF00109_consen 154 SAAGRIAILFGLRGPSYTV 172 (254)
T ss_dssp HHHHHHHHHHTB-SSEEEE
T ss_pred ccccchhhhcCCCCccccc
Confidence 9999999999999999987
No 13
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.93 E-value=2.3e-25 Score=220.81 Aligned_cols=154 Identities=20% Similarity=0.172 Sum_probs=134.2
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCC--------CCCcceeeecCCCCCCCCCChhhhhcCCHhH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT--------SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFM 236 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~--------~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~ 236 (324)
+||||||||+++|+|.++++||++|++|+++|+++++|+.. ..++.++|+|++|++..+++++..++|+++.
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 81 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLSA 81 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHHH
Confidence 78999999999999999999999999999999999887653 3467789999999887778999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHHHHHHhCC
Q 020557 237 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLVS 316 (324)
Q Consensus 237 rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~rVS~~lGl 316 (324)
+|++.+++|||+||||++ .+..|+||++|++.++.......+..+.++...+.|++....+++.++++|++.||+
T Consensus 82 ~lal~Aa~eAl~dAgl~~-----~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 156 (410)
T PRK07103 82 QAALAAAREAWRDAALGP-----VDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI 156 (410)
T ss_pred HHHHHHHHHHHHhcCcCC-----CCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 999999999999999953 467899999999888777666666555444556678888888889999999999999
Q ss_pred CCccccc
Q 020557 317 LNLLFPQ 323 (324)
Q Consensus 317 ~GPs~TV 323 (324)
+||+++|
T Consensus 157 ~G~~~tv 163 (410)
T PRK07103 157 RGEGFTV 163 (410)
T ss_pred CCCcccc
Confidence 9999987
No 14
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=8.1e-26 Score=246.42 Aligned_cols=148 Identities=20% Similarity=0.288 Sum_probs=127.7
Q ss_pred EEEEecceeCCCCCCHHHHHHHHHcCCCCceeCC--CCCCC-----------CCCcceeeecC---CCCCCCC-CChhhh
Q 020557 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCT-----------SFPTKIAAEIK---SFSTDGW-VAPKLS 229 (324)
Q Consensus 167 VvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~--rfd~~-----------~~~~~~~G~I~---dFd~~~~-Isp~ea 229 (324)
|+|+||+|++|+.+++++||++|.+|+++|++++ |||.+ +.+++++|+|+ +||+.|| |+|+|+
T Consensus 6 IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrEA 85 (1061)
T COG3321 6 IAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPREA 85 (1061)
T ss_pred EEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHHH
Confidence 9999999999999999999999999999999995 56643 23578999987 4999999 999999
Q ss_pred hcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHH
Q 020557 230 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 309 (324)
Q Consensus 230 r~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~r 309 (324)
+.||||+|++|+.+|||||||||+++ .+.+.+||||+|++..+|......- .. ..+++...++..+.+++|
T Consensus 86 ~~mDPQqRllLe~aw~AlEdAG~~~~---~l~g~~tgV~~g~~~~~y~~~~~~~-----~~-~~~~~~~~g~~~~~~a~R 156 (1061)
T COG3321 86 EAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGVFAGASVADYLLLLLAD-----DE-AEPEYAITGNSSSVAAGR 156 (1061)
T ss_pred HhcCchHhHHHHHHHHHHHHcCCCcc---ccCCcceEEEEeeccCccccccccc-----cc-cccceecccchhhHHHHH
Confidence 99999999999999999999999984 6777899999999987765432110 11 456777888888999999
Q ss_pred HHHHhCCCCccccc
Q 020557 310 LAMDLVSLNLLFPQ 323 (324)
Q Consensus 310 VS~~lGl~GPs~TV 323 (324)
|||+|||+||+++|
T Consensus 157 isy~l~l~GPs~~v 170 (1061)
T COG3321 157 ISYVLGLSGPSVTV 170 (1061)
T ss_pred HHHHhcCCCCCccc
Confidence 99999999999987
No 15
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.92 E-value=9.7e-25 Score=213.66 Aligned_cols=157 Identities=39% Similarity=0.696 Sum_probs=143.7
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
++|||||||+++|.|.++++||++|++|+++|++++.|+...++..++|+|++|++.+.+++++.+.|||+++|++.+++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE 80 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999998888889999999999998867999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
+||+||||++ ++++..++||++|++.+++...++++..+.+ +...++|+.++..+.+.++++|++.||++||+++|
T Consensus 81 ~AL~dAgl~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v 157 (406)
T cd00834 81 EALADAGLDP---EELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV 157 (406)
T ss_pred HHHHHcCCCc---ccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence 9999999987 3577899999999999999988888876653 45668899999999999999999999999999987
Q ss_pred C
Q 020557 324 Y 324 (324)
Q Consensus 324 ~ 324 (324)
.
T Consensus 158 ~ 158 (406)
T cd00834 158 S 158 (406)
T ss_pred c
Confidence 3
No 16
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.92 E-value=9.3e-25 Score=217.46 Aligned_cols=153 Identities=22% Similarity=0.348 Sum_probs=134.2
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCcceeeecC-CCCCCCCCChhhhhcCCHhHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIK-SFSTDGWVAPKLSKRMDKFMLYLL 240 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd--~~~~~~~~~G~I~-dFd~~~~Isp~ear~mDp~~rlaL 240 (324)
++||||||||+++|+|.++++||++|++|+++|++++.+. ...++++++|+|. +||+ +++++++++|||++++++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~--~~~~~~~~~~d~~~~~~l 88 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--QLTRVELRRMSYLQRMST 88 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccc--cCCHHHHhhccHHHHHHH
Confidence 4789999999999999999999999999999999998653 3457888999985 4553 489999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHHhCCCCc
Q 020557 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNL 319 (324)
Q Consensus 241 ~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GP 319 (324)
.+++|||||||++ ..+..|+||++|++.|+++.+++.+..+. ++.+.++|+.++..++|.++.+|++.||++||
T Consensus 89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~ 163 (418)
T PRK07910 89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG 163 (418)
T ss_pred HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence 9999999999985 25678999999999999988887777665 35567888889999999999999999999999
Q ss_pred cccc
Q 020557 320 LFPQ 323 (324)
Q Consensus 320 s~TV 323 (324)
++||
T Consensus 164 ~~ti 167 (418)
T PRK07910 164 VITP 167 (418)
T ss_pred cccc
Confidence 9987
No 17
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.92 E-value=1e-24 Score=252.00 Aligned_cols=155 Identities=18% Similarity=0.246 Sum_probs=128.5
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCC--CCCCC-----------CCCcceeeecC--CCCCCCC-CChhh
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCT-----------SFPTKIAAEIK--SFSTDGW-VAPKL 228 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~--rfd~~-----------~~~~~~~G~I~--dFd~~~~-Isp~e 228 (324)
++|||||||+++|+|.|+++||++|++|+++|++++ +|+.+ +.+++++|+|+ +||+.+| |+|++
T Consensus 7 ~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p~e 86 (2582)
T TIGR02813 7 MPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPPNI 86 (2582)
T ss_pred CCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCHHH
Confidence 569999999999999999999999999999999994 67643 34688999998 5888888 99999
Q ss_pred hhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHH---------------------HHHHHH-
Q 020557 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY---------------------DAIEAL- 286 (324)
Q Consensus 229 ar~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~---------------------~~~~~l- 286 (324)
++.|||+++|+|+++|||||||||.. +.++.|||||+|++.+++.... +.++.+
T Consensus 87 a~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (2582)
T TIGR02813 87 LELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLI 162 (2582)
T ss_pred HHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhh
Confidence 99999999999999999999999974 3678999999999877543110 011111
Q ss_pred ---HhhccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 287 ---RISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 287 ---~~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
.+.+..+++..+++.+.|++++|||+.|||+||++||
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tV 202 (2582)
T TIGR02813 163 KKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVV 202 (2582)
T ss_pred hhhcccccccCccccccccccHHHHHHHHHhCCCCCcccc
Confidence 1123345677889999999999999999999999998
No 18
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.90 E-value=3.5e-23 Score=203.62 Aligned_cols=147 Identities=32% Similarity=0.500 Sum_probs=131.1
Q ss_pred cEEEEecceeCCCCCC---HHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcC---CHhHHHH
Q 020557 166 RVVVTGMGLVSPLGHE---PDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRM---DKFMLYL 239 (324)
Q Consensus 166 rVvITGmG~vtPlG~d---~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~m---Dp~~rla 239 (324)
||||||||+++|+|.+ +++||++|.+|+++|+++++|+ ..++..++|+|++|+ +++++.+++ ||+++|+
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l~ 76 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLLA 76 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHHH
Confidence 6999999999999999 9999999999999999999887 678889999999877 678888888 9999999
Q ss_pred HHHHHHHHHhCCCCcccccc-cCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccC--hHHHHHHHHHhCC
Q 020557 240 LTAGKKALADGGITEDVMNE-LDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT--NMGSAMLAMDLVS 316 (324)
Q Consensus 240 L~AA~eALeDAGl~~~~~~~-~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~--n~iA~rVS~~lGl 316 (324)
+.++++||+||||++ ++ ++..++||++|++.+++...+..+..+. +.++|+.++..+. |+++++|++.||+
T Consensus 77 ~~aa~~Al~dAGl~~---~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 77 LVATEEALADAGITD---PYEVHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHhCCCCc---cccCCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhCc
Confidence 999999999999986 34 6788999999999999888776665443 3467888888888 9999999999999
Q ss_pred -CCccccc
Q 020557 317 -LNLLFPQ 323 (324)
Q Consensus 317 -~GPs~TV 323 (324)
+||+++|
T Consensus 151 ~~Gp~~tv 158 (407)
T cd00828 151 SHGPIKTP 158 (407)
T ss_pred CCCCCcCc
Confidence 9999987
No 19
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.90 E-value=2.7e-23 Score=205.91 Aligned_cols=153 Identities=21% Similarity=0.242 Sum_probs=120.5
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChh-hhhcCCHhHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK-LSKRMDKFMLYLLTA 242 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~-ear~mDp~~rlaL~A 242 (324)
.+||||||||+++|+|.++|+||++|++|+++ ..++..+...++..+.++ +|+..+++++ ..++||+.++|++.+
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~~~r~~~~a~~A 80 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVHPLPE---IDWSQQIPKRGDQRQMETWQRLGTYA 80 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCcccccc---cChhhcCCchhhhhccCHHHHHHHHH
Confidence 57899999999999999999999999999998 323222222344444443 4444556666 778999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHH------------HHHHH-hhccCCCCcccccccChHHHHH
Q 020557 243 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA------------IEALR-ISYKKMNPFCVPFATTNMGSAM 309 (324)
Q Consensus 243 A~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~------------~~~l~-~~~~~~~p~~~~~~l~n~iA~r 309 (324)
+.|||+||||+.+ +.+..|+||++|++.|++...++. +..+. .+.+.++|++++..++|+++++
T Consensus 81 a~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~ 157 (398)
T PRK06519 81 AGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGN 157 (398)
T ss_pred HHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHH
Confidence 9999999999642 345679999999999998765533 12222 2456789999999999999999
Q ss_pred HHHHhCCCCccccc
Q 020557 310 LAMDLVSLNLLFPQ 323 (324)
Q Consensus 310 VS~~lGl~GPs~TV 323 (324)
|++.||++||++||
T Consensus 158 is~~~gl~Gp~~ti 171 (398)
T PRK06519 158 ISIVHKVTGSSRTF 171 (398)
T ss_pred HHHHhCCCCccccc
Confidence 99999999999997
No 20
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=2.4e-23 Score=206.78 Aligned_cols=155 Identities=35% Similarity=0.557 Sum_probs=137.6
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
++||||||||+++|+|++++++|++|+.|+++|+.+++|+...++++++|+|++| ..++.+++.++||+..+|++.|+
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa 79 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA 79 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999988 45678888889999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccC-CCCcccccccChHHHHHHHHHhCCCCccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKK-MNPFCVPFATTNMGSAMLAMDLVSLNLLF 321 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~-~~p~~~~~~l~n~iA~rVS~~lGl~GPs~ 321 (324)
.|||+|||++.+ ...+. |+||++|++.|+++.++..+..+. ++.++ ++|+.++..++|+.++.|++.||++||++
T Consensus 80 ~eAl~dAgl~~~--~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~ 156 (412)
T COG0304 80 VEALEDAGLDNE--LNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY 156 (412)
T ss_pred HHHHHHcCCCcc--cccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence 999999999732 22333 999999999999998876443333 45445 89999999999999999999999999999
Q ss_pred cc
Q 020557 322 PQ 323 (324)
Q Consensus 322 TV 323 (324)
++
T Consensus 157 ~~ 158 (412)
T COG0304 157 TP 158 (412)
T ss_pred Ch
Confidence 87
No 21
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.87 E-value=8.6e-22 Score=193.52 Aligned_cols=150 Identities=22% Similarity=0.318 Sum_probs=125.2
Q ss_pred cEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCC--CCCCC----------CCCcceeeecCC---CCCCCC-CChhhh
Q 020557 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCT----------SFPTKIAAEIKS---FSTDGW-VAPKLS 229 (324)
Q Consensus 166 rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~--rfd~~----------~~~~~~~G~I~d---Fd~~~~-Isp~ea 229 (324)
+|||||||+++|+|.++++||++|++|+++|++++ +|+.. .....++|+|++ ||+..| |++++.
T Consensus 2 ~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~ 81 (421)
T cd00833 2 PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPREA 81 (421)
T ss_pred CEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHHH
Confidence 69999999999999999999999999999999986 46543 235678899887 565556 899999
Q ss_pred hcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHH
Q 020557 230 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 309 (324)
Q Consensus 230 r~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~r 309 (324)
+.||++++|+++++++||+|||++. ++++..++||++|+..+.+.. ........++++.+...+.+..+++
T Consensus 82 ~~~~~~~~l~~~aa~~AL~dAgl~~---~~~~~~~~gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (421)
T cd00833 82 EAMDPQQRLLLEVAWEALEDAGYSP---ESLAGSRTGVFVGASSSDYLE------LLARDPDEIDAYAATGTSRAFLANR 152 (421)
T ss_pred HhcCHHHHHHHHHHHHHHHHcCCCc---hhcCCCCceEEeCcCHHHHHH------HHhhcccccCcccccCcchHHHHHH
Confidence 9999999999999999999999986 356788999999998663221 1222334578888899999999999
Q ss_pred HHHHhCCCCcccccC
Q 020557 310 LAMDLVSLNLLFPQY 324 (324)
Q Consensus 310 VS~~lGl~GPs~TV~ 324 (324)
|++.+|++||+++|.
T Consensus 153 i~~~~gl~g~~~~v~ 167 (421)
T cd00833 153 ISYFFDLRGPSLTVD 167 (421)
T ss_pred HHHHcCCCCCceeec
Confidence 999999999999873
No 22
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.85 E-value=4.3e-21 Score=189.56 Aligned_cols=149 Identities=20% Similarity=0.276 Sum_probs=125.0
Q ss_pred EEEEecceeCCCCCCHHHHHHHHHcCCCCceeCC--CCCCCC------------CCcceeeecC---CCCCCCC-CChhh
Q 020557 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTS------------FPTKIAAEIK---SFSTDGW-VAPKL 228 (324)
Q Consensus 167 VvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~--rfd~~~------------~~~~~~G~I~---dFd~~~~-Isp~e 228 (324)
|||||||+++|+|.++++||++|.+|+++|++++ +|+... .++.++|+|+ +||+..| +++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 7999999999999999999999999999999985 576543 3567788765 4787777 99999
Q ss_pred hhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHH
Q 020557 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (324)
Q Consensus 229 ar~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~ 308 (324)
.++||++++|++.++.+||+|||+++ .+++..|+||++|+..++ +...+.+....++++.++..+.+..++
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~---~~id~~~~gv~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 151 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDP---ESLRGSRTGVFVGAMSSD------YAELLARDPEDIEGYAATGTARSFIAN 151 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCh---hHcCCCCCEEEEEEcHHH------HHHHHhhCccccchhhhccchhHHHHH
Confidence 99999999999999999999999986 356778999999987543 222233445567788888888999999
Q ss_pred HHHHHhCCCCcccccC
Q 020557 309 MLAMDLVSLNLLFPQY 324 (324)
Q Consensus 309 rVS~~lGl~GPs~TV~ 324 (324)
+|++.||++||+++|.
T Consensus 152 ~i~~~lgl~g~~~~v~ 167 (424)
T smart00825 152 RISYFFDLRGPSVTVD 167 (424)
T ss_pred HHHHHhCCCCCccccc
Confidence 9999999999999873
No 23
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.83 E-value=6.4e-20 Score=181.03 Aligned_cols=151 Identities=16% Similarity=0.108 Sum_probs=120.2
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCC-CCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGV-SGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~-sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~A 242 (324)
|+||||||+|+++|+|.++++||++|++|+ ++|++++.|+.. ++. +.|.|++|+. .+++.+..+.|++..++++.+
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 77 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPT-WVGEVVGVEL-PALPAALAAFDCRNNRLALLA 77 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCe-EEEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence 468999999999999999999999999999 999999887654 444 4477887773 446777788899998988877
Q ss_pred HHH---HHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhc-cCCCCcccccccChHHHHHHHHHhCCCC
Q 020557 243 GKK---ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLVSLN 318 (324)
Q Consensus 243 A~e---ALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~-~~~~p~~~~~~l~n~iA~rVS~~lGl~G 318 (324)
+.+ |++|++- +.+..|+||++|++.+++...+..+..+.... ....++.++..++++.+++|++.||++|
T Consensus 78 ~~~~~~a~~~~~~------~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 151 (392)
T PRK09185 78 LQQIEPAVEAAIA------RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG 151 (392)
T ss_pred HHHHHHHHHhhcc------cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence 766 5555541 24567999999999999988887766543322 1224666778889999999999999999
Q ss_pred ccccc
Q 020557 319 LLFPQ 323 (324)
Q Consensus 319 Ps~TV 323 (324)
|+++|
T Consensus 152 p~~~i 156 (392)
T PRK09185 152 PAYTI 156 (392)
T ss_pred Ccccc
Confidence 99987
No 24
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.83 E-value=3.6e-20 Score=184.38 Aligned_cols=145 Identities=27% Similarity=0.487 Sum_probs=124.1
Q ss_pred eeCCCCCCHHHHHHHHHcCCCCceeCCCCC----------------CCCCCcceeeecC--CCCCCCCCChhhhhcCCHh
Q 020557 174 LVSPLGHEPDVFYNNLLEGVSGISEIETFD----------------CTSFPTKIAAEIK--SFSTDGWVAPKLSKRMDKF 235 (324)
Q Consensus 174 ~vtPlG~d~defWe~Ll~G~sgIs~i~rfd----------------~~~~~~~~~G~I~--dFd~~~~Isp~ear~mDp~ 235 (324)
+++|+|.++|+||++|++|+++|+++++|+ ...++++++|+|+ +||+.+|.. ..++|++
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~---~~~~~~~ 77 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAP---TKRESRA 77 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCC---cccCCHH
Confidence 479999999999999999999999998876 4568889999998 688776632 2246999
Q ss_pred HHHHHHHHHHHHHhCCCC-cccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHH
Q 020557 236 MLYLLTAGKKALADGGIT-EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMD 313 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~-~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~ 313 (324)
++|++.++++||+||||+ + ++++..++||++|++.+++....+.+..+. .+...++|+.++..+.|+++++|++.
T Consensus 78 ~~l~~~aa~~Al~dAGl~~~---~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 78 THFAMAAAREALADAKLDIL---SEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred HHHHHHHHHHHHHHcCCCcc---cccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999997 4 256778999999999999887777666554 35667889999999999999999999
Q ss_pred hCCCCcccccC
Q 020557 314 LVSLNLLFPQY 324 (324)
Q Consensus 314 lGl~GPs~TV~ 324 (324)
|||+||++||.
T Consensus 155 ~~l~Gp~~ti~ 165 (421)
T PTZ00050 155 HKLKGPSGSAV 165 (421)
T ss_pred hCCCCcccccc
Confidence 99999999983
No 25
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.82 E-value=7.8e-20 Score=180.34 Aligned_cols=138 Identities=25% Similarity=0.314 Sum_probs=107.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
++||||||||+++|+|. +++||++|++|+++|++++.|+. ++....+.+. ++ + ..++ ++.+.++
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~~------~---~~~~---~~~~~a~ 64 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-NQ------P---SSLE---DLTKTVV 64 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-cc------c---cccc---HHHHHHH
Confidence 46899999999999999 99999999999999999988752 2222222211 11 1 1233 3666899
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hc---cCCCCcccccccChHHHHHHHHHhCCCCc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SY---KKMNPFCVPFATTNMGSAMLAMDLVSLNL 319 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~---~~~~p~~~~~~l~n~iA~rVS~~lGl~GP 319 (324)
.|||+||||+. +..|+||++|++.|++..+++++..+.+ +. ..++|..++..++|+++++|++.||++||
T Consensus 65 ~~Al~dagl~~------~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp 138 (381)
T PRK05952 65 TAALKDAGLTP------PLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP 138 (381)
T ss_pred HHHHHhcCCCC------CCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence 99999999974 2479999999999999888877665543 21 25678888899999999999999999999
Q ss_pred cccc
Q 020557 320 LFPQ 323 (324)
Q Consensus 320 s~TV 323 (324)
++||
T Consensus 139 ~~ti 142 (381)
T PRK05952 139 VLAP 142 (381)
T ss_pred cccc
Confidence 9987
No 26
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.78 E-value=2.6e-18 Score=171.48 Aligned_cols=150 Identities=20% Similarity=0.131 Sum_probs=114.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
+.+|||||||+++|+|.++++||++|++|+++|+++++|+...++++++|+|+.++.. ....+++.++|.+.++
T Consensus 10 ~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~aa 83 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPES------PFGASALSEALARLAA 83 (425)
T ss_pred CcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccc------cccccCHHHHHHHHHH
Confidence 4579999999999999999999999999999999999999989999999999633322 1234678899999999
Q ss_pred HHHHHhCCCCccccc-----------ccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHH
Q 020557 244 KKALADGGITEDVMN-----------ELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLA 311 (324)
Q Consensus 244 ~eALeDAGl~~~~~~-----------~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS 311 (324)
+|||+||||...... .....++|++.++..+.... ++.+. ....+..+.++...+.+.++++|+
T Consensus 84 ~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 84 EEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPS----YDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHH----HHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 999999999532100 01256899999887654332 23322 222233344566777889999999
Q ss_pred HHhCCCCccccc
Q 020557 312 MDLVSLNLLFPQ 323 (324)
Q Consensus 312 ~~lGl~GPs~TV 323 (324)
+.||++||+++|
T Consensus 160 ~~~gl~G~~~~i 171 (425)
T PRK06501 160 DRFGTRGLPISL 171 (425)
T ss_pred HHhCCCCCceee
Confidence 999999999987
No 27
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.74 E-value=1.6e-18 Score=183.85 Aligned_cols=150 Identities=23% Similarity=0.336 Sum_probs=126.0
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCC-CCCC--CCCcceeeec---CCCCCCCC-CChhhhhcCCHhH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCT--SFPTKIAAEI---KSFSTDGW-VAPKLSKRMDKFM 236 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~r-fd~~--~~~~~~~G~I---~dFd~~~~-Isp~ear~mDp~~ 236 (324)
+.+|||+||.+..|-.+++++||++|++|.+-+++-++ |... ++|.+. |.. +.||..+| +.+|++..||||.
T Consensus 10 ~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~-gKlKdL~kFDa~ff~vh~KQa~~MDPq~ 88 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRS-GKLKDLNKFDAGFFGVHPKQANTMDPQL 88 (2376)
T ss_pred CCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhh-cchhhhhhhcccccCcCcccccccCHHH
Confidence 56799999999999999999999999999999988754 5432 334333 444 45999888 9999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHHHHHHhCC
Q 020557 237 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLVS 316 (324)
Q Consensus 237 rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~rVS~~lGl 316 (324)
|+.|++.|||+-||||.| .++.+.++|||+|.+..+++.. +......+..|.+.+-...|.||||||.|+|
T Consensus 89 RlLLE~t~EAivDaGiNP---~~LRGs~tGv~vg~s~seTs~~------~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf 159 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGINP---DDLRGSRTGVFVGVSGSETSGA------LSQDPDTVNGYSMTGCVRAMFANRISYTFDF 159 (2376)
T ss_pred HHHHHHHHHHHHhCCCCh---hhcCcccceeEEeecCcccccc------ccCCCccccceeecccHHHHhhcceeEEEec
Confidence 999999999999999998 4799999999999987665532 2234455777888888899999999999999
Q ss_pred CCccccc
Q 020557 317 LNLLFPQ 323 (324)
Q Consensus 317 ~GPs~TV 323 (324)
+||+++|
T Consensus 160 qGPS~s~ 166 (2376)
T KOG1202|consen 160 QGPSFSV 166 (2376)
T ss_pred cCCchhh
Confidence 9999976
No 28
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.16 E-value=9.9e-11 Score=114.33 Aligned_cols=86 Identities=19% Similarity=0.315 Sum_probs=77.3
Q ss_pred CCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHH
Q 020557 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAML 310 (324)
Q Consensus 232 mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rV 310 (324)
||+.++|++.++.|||+|||+. .+..|+||++|++.|++..+++.++.+. ++.+.++|+.++..++|+++++|
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 74 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV 74 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence 6889999999999999999985 2467999999999999999888877664 46677899999999999999999
Q ss_pred HHHhCCCCccccc
Q 020557 311 AMDLVSLNLLFPQ 323 (324)
Q Consensus 311 S~~lGl~GPs~TV 323 (324)
++.||++||++||
T Consensus 75 s~~~~l~Gp~~ti 87 (342)
T PRK14691 75 SIKHHFKGPIGAP 87 (342)
T ss_pred HHHhCCCCCcccc
Confidence 9999999999987
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=98.40 E-value=7.6e-07 Score=84.70 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHHHHHHh
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~rVS~~l 314 (324)
++++++.|+++||+|||++++ ....+.++|++|++.+.+..... ..+....+.|+.+.+.+.+..+++|+..|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 83 (332)
T cd00825 11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPRFQVF----GADAMRAVGPYVVTKAMFPGASGQIATPL 83 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHHHHhh----hhccccccCcchhhcccchHHHHHHHHHh
Confidence 678999999999999999852 34567789999998776542211 12334567899999999999999999999
Q ss_pred CCCCccccc
Q 020557 315 VSLNLLFPQ 323 (324)
Q Consensus 315 Gl~GPs~TV 323 (324)
|++||+++|
T Consensus 84 gl~g~~~~v 92 (332)
T cd00825 84 GIHGPAYDV 92 (332)
T ss_pred CCCCCcccc
Confidence 999999987
No 30
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=98.16 E-value=8.9e-06 Score=75.11 Aligned_cols=90 Identities=16% Similarity=0.270 Sum_probs=78.4
Q ss_pred CCCChhhhhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccc
Q 020557 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 301 (324)
Q Consensus 222 ~~Isp~ear~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~ 301 (324)
.+|++-+.|+|++..|+++.++++++++.+ +.+ .+++++..|.+....+..+.+.++ ..++|..|..+
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~-------~~d----~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~S 88 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDE-------QPD----AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQS 88 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccC-------CCC----cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhhh
Confidence 469999999999999999999999886521 111 689999999999988888888764 46999999999
Q ss_pred cChHHHHHHHHHhCCCCccccc
Q 020557 302 TTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 302 l~n~iA~rVS~~lGl~GPs~TV 323 (324)
++|++++.+++..+.+||+.+|
T Consensus 89 VHNA~aG~~sI~~~~~~~~tal 110 (218)
T PF13723_consen 89 VHNAAAGYWSIATKNTGPNTAL 110 (218)
T ss_pred hhhHHHHHHHHHhCCCCceEEE
Confidence 9999999999999999999886
No 31
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=98.15 E-value=1.5e-05 Score=77.93 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=61.4
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
+++|+|||+|+++|+|.+.++.|.+|+.|.+.......++... ..++.+. ..+-++......+..+|+..|+
T Consensus 2 ~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~-~~~i~~~-------~~~~~~~~~~~~r~~~La~~Al 73 (348)
T PRK06147 2 MRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPG-GEWLIGA-------PVPLPPPWRGPERLAEMAAPAI 73 (348)
T ss_pred CCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCC-CCceEee-------cCcCCcccCchHHHHHHHHHHH
Confidence 4569999999999999999999999988887765444333210 1111110 0011111122457788999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
.+||++++.. +..+++++|+.+
T Consensus 74 ~~aL~~a~~~-------~~~~i~lil~~~ 95 (348)
T PRK06147 74 AEALEGLPAL-------DASEAPLLLCVA 95 (348)
T ss_pred HHHHHhcccc-------cccCCcEEEEeC
Confidence 9999999831 124577888764
No 32
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=94.87 E-value=0.075 Score=48.40 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhhccCCCCcccccccChHHHHHHHHHh
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~~~~~~p~~~~~~l~n~iA~rVS~~l 314 (324)
+..++.+|+.+||+++|+++ .+..+|++|+..++.. .+..+.+|+..+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~-------~~i~~li~~~~~~~~~-------------------------~~~~a~~i~~~l 54 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSK-------GPIVGVIVGTTGGSGE-------------------------FSGAAGQLAYHL 54 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCC-------CCceEEEEEECCCCcc-------------------------ccHHHHHHHHHh
Confidence 56789999999999999975 2456899998755421 246677888888
Q ss_pred CC-CCcccccC
Q 020557 315 VS-LNLLFPQY 324 (324)
Q Consensus 315 Gl-~GPs~TV~ 324 (324)
|+ ++|+++|.
T Consensus 55 g~~~~~~~~i~ 65 (254)
T cd00327 55 GISGGPAYSVN 65 (254)
T ss_pred CCCCCCcceec
Confidence 88 78887763
No 33
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.82 E-value=2.4 Score=41.63 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=24.3
Q ss_pred HhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 234 p~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
....|+..|+.+||+++|++++ +++ .|++++.
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~---~Id----~li~~~~ 125 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAE---DID----AVIVACS 125 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEECC
Confidence 4457999999999999999863 343 4677765
No 34
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.59 E-value=3.6 Score=39.00 Aligned_cols=81 Identities=22% Similarity=0.215 Sum_probs=46.4
Q ss_pred CcEEEEecceeCCCC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 165 ~rVvITGmG~vtPlG-~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
.+|.|+++|...|.- ...+++++.+ |.+- ..+.+ ..++..+. +..+ -.....|+.+|+
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~--~~~~-~~i~~--~~gi~~r~-----------~~~~-----~~~~~~la~~A~ 60 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMV--DTSD-EWIVT--RTGIKERR-----------IAAP-----DETTSDLATEAA 60 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHc--CCCH-HHhhh--hcCeEEEE-----------eCCC-----CCCHHHHHHHHH
Confidence 459999999999975 3567777654 2110 00100 00000000 0000 123578899999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.+||+++|++++ +++ .|++|++.
T Consensus 61 ~~al~~agl~~~---~id----~vi~~~~~ 83 (319)
T PRK09352 61 KKALEAAGIDPE---DID----LIIVATTT 83 (319)
T ss_pred HHHHHHcCCCHH---HCC----EEEEEcCC
Confidence 999999999863 333 47777764
No 35
>PRK08256 lipid-transfer protein; Provisional
Probab=80.15 E-value=3.3 Score=41.06 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=25.8
Q ss_pred HhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcc
Q 020557 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGS 271 (324)
Q Consensus 234 p~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt 271 (324)
....|+.+|+++||+|||++++ +++.-.+|.+++.
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~---dID~~~~g~~~~~ 55 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYD---AVQQAYVGYVYGD 55 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChH---HCCeeEEEEEeCC
Confidence 3568899999999999999863 5555455555544
No 36
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=78.49 E-value=2.8 Score=41.45 Aligned_cols=34 Identities=29% Similarity=0.503 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
..-|+.+++++||+|+|++++ +++ +|++|+..++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~---~Id----~vi~g~~~~~ 55 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGK---DID----AMYVGNMSAG 55 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecccc
Confidence 356789999999999999863 344 6788876433
No 37
>PLN03172 chalcone synthase family protein; Provisional
Probab=78.44 E-value=8.4 Score=38.60 Aligned_cols=101 Identities=11% Similarity=0.177 Sum_probs=52.8
Q ss_pred cEEEEecceeCCCCC-C---HHHHHHHHHcC--CCCcee-CCC-CCCCCCCcceeee----cCCCCCCC--C----CChh
Q 020557 166 RVVVTGMGLVSPLGH-E---PDVFYNNLLEG--VSGISE-IET-FDCTSFPTKIAAE----IKSFSTDG--W----VAPK 227 (324)
Q Consensus 166 rVvITGmG~vtPlG~-d---~defWe~Ll~G--~sgIs~-i~r-fd~~~~~~~~~G~----I~dFd~~~--~----Isp~ 227 (324)
+++|.|+|.-+|.-. . ..+++..+.+- ...++. +.+ |+..+...+.... ++++ +.. + +..+
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~-~~~~~~~~p~~~~r 94 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKEN-PNMCAYMAPSLDAR 94 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhC-ccccccCCCCHHHH
Confidence 488999999999753 2 33444444432 122222 111 2333333333322 1111 111 1 2233
Q ss_pred hhhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 228 ear~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
....+.-...|+.+|+.+||+++|++++ +++ -|++.|+.+
T Consensus 95 ~~~~~~~a~~La~~Aa~~aL~~ag~~~~---dId----~ii~~t~t~ 134 (393)
T PLN03172 95 QDMVVVEVPKLGKEAAAKAIKEWGQPKS---KIT----HLVFCTTSG 134 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEccCC
Confidence 3344455667899999999999999762 222 245566655
No 38
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=76.48 E-value=5.5 Score=37.82 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
...|+++|+++||+++|++++ +++ .|++++..
T Consensus 51 ~~~la~~A~~~al~~agl~~~---~Id----~~i~~~~~ 82 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKD---DID----LIIVATTT 82 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEECCC
Confidence 467799999999999999763 333 46666654
No 39
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=75.86 E-value=24 Score=33.80 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..-|+.+|+++||+++|++++ +++ .|++++..
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~---~Id----~li~~s~~ 92 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPS---DIG----LLINTSVC 92 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEcCC
Confidence 456899999999999999763 333 35666654
No 40
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=71.98 E-value=4.4 Score=38.17 Aligned_cols=32 Identities=31% Similarity=0.418 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
..|+-++.+++|+++|++++ +++ .|++|+..+
T Consensus 27 ~~L~~~a~~~al~~~~i~~~---~Id----~v~~G~~~~ 58 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPE---DID----AVIVGNVLQ 58 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGG---GEE----EEEEE-SSS
T ss_pred HHHHHHHHHHHHHhcccchh---hhh----hcCcccccc
Confidence 45667777888888887653 232 366666554
No 41
>PLN03168 chalcone synthase; Provisional
Probab=71.61 E-value=12 Score=37.27 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=27.0
Q ss_pred hhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 229 ar~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
.....-...|+.+|+.+||+++|++++ +++ -|++.|+.+
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~---dId----~lI~~T~Tg 133 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKS---DIT----HIVFATTSG 133 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEECCCC
Confidence 334445566889999999999999863 332 356666654
No 42
>PRK06059 lipid-transfer protein; Provisional
Probab=70.66 E-value=8.1 Score=38.46 Aligned_cols=19 Identities=37% Similarity=0.497 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhCCCCc
Q 020557 236 MLYLLTAGKKALADGGITE 254 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~ 254 (324)
..|+.+|+++||+|||+++
T Consensus 24 ~~La~~A~~~Al~dAgl~~ 42 (399)
T PRK06059 24 VEYGVVAARAALADAGLDW 42 (399)
T ss_pred HHHHHHHHHHHHHHcCCCH
Confidence 5678999999999999976
No 43
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=70.02 E-value=6.6 Score=38.53 Aligned_cols=22 Identities=36% Similarity=0.451 Sum_probs=18.9
Q ss_pred HhHHHHHHHHHHHHHhCCCCcc
Q 020557 234 KFMLYLLTAGKKALADGGITED 255 (324)
Q Consensus 234 p~~rlaL~AA~eALeDAGl~~~ 255 (324)
-..-|+..|+++||++||++++
T Consensus 51 ~~s~la~~Aa~~AL~~Agi~~~ 72 (323)
T COG0332 51 TTSDLAVEAARKALEDAGISPD 72 (323)
T ss_pred cHHHHHHHHHHHHHHHcCCCHH
Confidence 3567899999999999999873
No 44
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=67.42 E-value=10 Score=37.49 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..-|+.+|+++||+|||++++ +++ +|++|+..
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~---dID----~vi~~~~~ 53 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPE---EVD----DVIMGNVL 53 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHH---HCC----EEEEEecc
Confidence 367889999999999999863 444 46777654
No 45
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=65.61 E-value=11 Score=36.12 Aligned_cols=33 Identities=30% Similarity=0.317 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
...|+.+|+++||+++|++++ +++ -|++++..+
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~---dId----~li~~~~~~ 84 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLD---DID----CIICASGTI 84 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEECCCC
Confidence 466899999999999999863 333 256666543
No 46
>PLN03173 chalcone synthase; Provisional
Probab=64.22 E-value=18 Score=36.27 Aligned_cols=89 Identities=11% Similarity=0.159 Sum_probs=45.3
Q ss_pred cEEEEecceeCCCCC-CHHHHHHH---HHc--CCCCcee-CCC-CCCCCCCcceeeecCC-C--CCCCC--CChhhhh--
Q 020557 166 RVVVTGMGLVSPLGH-EPDVFYNN---LLE--GVSGISE-IET-FDCTSFPTKIAAEIKS-F--STDGW--VAPKLSK-- 230 (324)
Q Consensus 166 rVvITGmG~vtPlG~-d~defWe~---Ll~--G~sgIs~-i~r-fd~~~~~~~~~G~I~d-F--d~~~~--Isp~ear-- 230 (324)
++.|.|+|.-.|.-. .-+++.+. +.+ +....+. +.+ |+..+...+.....++ + ++..+ ..|....
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 488999999999753 33344443 331 2222222 211 2333333333222111 0 11111 1223333
Q ss_pred --cCCHhHHHHHHHHHHHHHhCCCCc
Q 020557 231 --RMDKFMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 231 --~mDp~~rlaL~AA~eALeDAGl~~ 254 (324)
...-...|+.+|+.+||+++|+++
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~ 121 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPK 121 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 334455788999999999999986
No 47
>PLN03171 chalcone synthase-like protein; Provisional
Probab=63.81 E-value=26 Score=35.08 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=25.5
Q ss_pred CCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 232 mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
.+...-|+++|+.+||+++|++++ +++ -|++.|..+.
T Consensus 105 ~~~a~~la~~Aa~~aL~~ag~~~~---dId----~li~~t~t~~ 141 (399)
T PLN03171 105 ADAVPELAAEAAKKAIAEWGRPAA---DIT----HLVVTTNSGA 141 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEcCCCC
Confidence 345566899999999999999863 332 3555555543
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=62.91 E-value=13 Score=36.97 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.+|+++||+|+|++++ +++ .|++|+..
T Consensus 27 ~~La~~A~~~AL~~agl~~~---dID----~vi~g~~~ 57 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPA---QVD----EVILGQVL 57 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEec
Confidence 56789999999999999873 454 57888754
No 49
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=60.24 E-value=17 Score=36.36 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
...|+.+++++||+|+|++++ +++ .|++|+...
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~---~ID----~vi~G~~~~ 59 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPA---EVE----DVIMGCANP 59 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----cEEEEEeec
Confidence 467889999999999999874 444 378887653
No 50
>PLN03170 chalcone synthase; Provisional
Probab=56.38 E-value=30 Score=34.78 Aligned_cols=102 Identities=13% Similarity=0.184 Sum_probs=51.9
Q ss_pred cEEEEecceeCCCCC-CHHHHHHHHHc-----CCCCcee-CCC-CCCCCCCcceeeecCC---CCCCCC--CChhhhh--
Q 020557 166 RVVVTGMGLVSPLGH-EPDVFYNNLLE-----GVSGISE-IET-FDCTSFPTKIAAEIKS---FSTDGW--VAPKLSK-- 230 (324)
Q Consensus 166 rVvITGmG~vtPlG~-d~defWe~Ll~-----G~sgIs~-i~r-fd~~~~~~~~~G~I~d---Fd~~~~--Isp~ear-- 230 (324)
+..|.|+|.-.|.-. .-+++++.+.. .....+. +.+ |+..+...+.....++ .++..+ ..|...+
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 378999999999753 33444444432 1112221 111 2333444443322111 111111 2233333
Q ss_pred --cCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 231 --RMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 231 --~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
..+-.-.|+..|+.+||+++|++++ +++ -|++.++.|
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~---dId----~lI~~T~Tg 138 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQPKS---KIT----HLVFCTTSG 138 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEccCC
Confidence 3444556899999999999999763 232 245566554
No 51
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=55.99 E-value=22 Score=35.34 Aligned_cols=31 Identities=16% Similarity=0.076 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
...|+.+++.+||+|+|++++ +++ +|++|..
T Consensus 26 ~~~L~~~a~~~al~dagi~~~---dID----~vi~g~~ 56 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPA---LVQ----EVIMGNV 56 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEec
Confidence 356889999999999999873 454 5777754
No 52
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=54.64 E-value=25 Score=34.29 Aligned_cols=33 Identities=27% Similarity=0.517 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
...|+.+|+++||+|+|++++ +++ +|++|+...
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~---~Id----~vi~g~~~~ 48 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPA---DID----AVVVGNAAG 48 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEecccc
Confidence 467889999999999999763 332 577777643
No 53
>PLN03169 chalcone synthase family protein; Provisional
Probab=54.08 E-value=73 Score=31.76 Aligned_cols=21 Identities=10% Similarity=0.036 Sum_probs=18.0
Q ss_pred HhHHHHHHHHHHHHHhCCCCc
Q 020557 234 KFMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 234 p~~rlaL~AA~eALeDAGl~~ 254 (324)
....|+.+|+.+||+++|+++
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~ 125 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPV 125 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCH
Confidence 345689999999999999976
No 54
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=49.45 E-value=32 Score=34.10 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..-|+.+|+++||+|||++++ +++ +|++|+..
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~---dID----~vv~g~~~ 52 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPE---LID----DVIFGNVL 52 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecc
Confidence 467889999999999999863 454 56777653
No 55
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=49.19 E-value=37 Score=34.26 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..|+.+|+++||+|||++++ +++ +|++|+..
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~---dID----~vi~g~~~ 58 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPD---DLD----EVILGCAM 58 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecc
Confidence 56789999999999999863 444 67887654
No 56
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=48.60 E-value=28 Score=32.74 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
...|+.+|+++||+++|++++ +++ .|++++...
T Consensus 50 ~~~la~~A~~~al~~ag~~~~---~Id----~li~~~~~~ 82 (320)
T cd00830 50 TSDLAVEAAKKALEDAGIDAD---DID----LIIVATSTP 82 (320)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEcCCC
Confidence 577899999999999999763 333 356666543
No 57
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=46.31 E-value=38 Score=33.90 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
.-|+.+|+++||+|+|++++ +++ .|++|+..+.
T Consensus 27 ~eLa~~A~~~AL~~agl~~~---dID----~vv~g~~~~~ 59 (404)
T PRK06205 27 EELAATVIRALVERTGIDPA---RID----DVIFGQGYPN 59 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeccCC
Confidence 45778999999999999873 454 5788876543
No 58
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=43.94 E-value=34 Score=32.43 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHhCCCCc
Q 020557 235 FMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~ 254 (324)
...|+.+|+++||+++|+++
T Consensus 53 ~~~la~~A~~~al~~ag~~~ 72 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDA 72 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCH
Confidence 46778999999999999986
No 59
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=41.74 E-value=26 Score=34.96 Aligned_cols=30 Identities=20% Similarity=0.238 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
.-|+.+|+.+||+|||++++ +++ +|++|+.
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~---dID----~vi~g~~ 56 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDAD---DIE----VVHVGNF 56 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEec
Confidence 56789999999999999874 344 4555554
No 60
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=39.33 E-value=51 Score=33.09 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhC-CCCcccccccCCCceEEEEccc
Q 020557 236 MLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 236 ~rlaL~AA~eALeDA-Gl~~~~~~~~~~~r~GV~vGt~ 272 (324)
..|+.+++++||+|+ |++++ +++ +|++|..
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~---dID----~vv~g~~ 58 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPT---DID----DLMLGCG 58 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHH---HCC----EEEEEcc
Confidence 567899999999997 99873 454 5677753
No 61
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=38.81 E-value=1.1e+02 Score=29.69 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=21.4
Q ss_pred hhhcCCHhHHHHHHHHHHHHHhCCCCc
Q 020557 228 LSKRMDKFMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 228 ear~mDp~~rlaL~AA~eALeDAGl~~ 254 (324)
......-...|+.+|+.+||+++|+++
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~ 104 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRP 104 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 334444567889999999999999976
No 62
>PRK05790 putative acyltransferase; Provisional
Probab=38.81 E-value=29 Score=34.43 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGS 271 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt 271 (324)
...|+.+|+++||+|||++++ +++ +|++|+
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~---dID----~vi~g~ 55 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPE---QVD----EVIMGQ 55 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----eEEEEE
Confidence 367789999999999999874 444 455554
No 63
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=37.71 E-value=37 Score=33.60 Aligned_cols=31 Identities=26% Similarity=0.514 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..|+.+|+++||+|+|++++ +++ +|++|+..
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~---dId----~vi~g~~~ 53 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAG---DVD----GIFLGHFN 53 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEec
Confidence 56789999999999999863 343 57777653
No 64
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=37.29 E-value=68 Score=30.18 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
...|+..|+++||+++|++++ +++ .|++|+...
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~---~Id----~li~~~~~~ 80 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPD---DIG----LLIVATESP 80 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEcCCC
Confidence 466889999999999999763 343 466676543
No 65
>PRK06840 hypothetical protein; Validated
Probab=36.81 E-value=73 Score=30.54 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHhCCCCc
Q 020557 235 FMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~ 254 (324)
..-|+.+|+++||+++|+++
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~ 72 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDP 72 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCH
Confidence 46788999999999999986
No 66
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=33.45 E-value=48 Score=32.74 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
...|+.+|+++||+|||++++ +++ +|++|+..
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~---dID----~vi~g~~~ 52 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQT---DIE----LVVVGSTA 52 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecc
Confidence 356889999999999999863 443 56677654
No 67
>PRK07937 lipid-transfer protein; Provisional
Probab=31.79 E-value=52 Score=32.46 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhCCCCcc
Q 020557 236 MLYLLTAGKKALADGGITED 255 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~ 255 (324)
.-|+.+|+.+||+|||++++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~ 44 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKS 44 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHH
Confidence 56889999999999999874
No 68
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=31.28 E-value=51 Score=32.13 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
...|+++|+++||+|+|++++ +++ +|++++..+.
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~---dID----~li~~s~~~~ 83 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPK---DIG----AVYVGSESHP 83 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCCC
Confidence 467899999999999999863 444 4666765554
No 69
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=31.24 E-value=45 Score=33.31 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
..|+.+++++||+|+||+++ +++ +|++|+.
T Consensus 28 ~~L~~ea~~~AL~dagl~~~---dID----~v~vg~~ 57 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPK---DID----AAWFGTH 57 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEec
Confidence 56789999999999999873 444 4677764
No 70
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=30.43 E-value=66 Score=31.57 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=25.2
Q ss_pred HhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 234 p~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
....|+..|+.+||+++|++++ +++ -|++++...+
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~---dId----~lI~~t~t~d 93 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKN---SLD----ALIVVTQSPD 93 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEcCCCC
Confidence 3577899999999999999863 332 3556666544
No 71
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=29.51 E-value=50 Score=33.03 Aligned_cols=29 Identities=34% Similarity=0.494 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGS 271 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt 271 (324)
.-|+.+|+++||+|+|++++ +++ ++++|+
T Consensus 30 ~~L~~~A~~~Al~dagl~~~---dID----~~i~~~ 58 (392)
T PRK06065 30 QELAWEAASKALDEAGLELK---DID----CVVIGS 58 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEec
Confidence 55789999999999999863 444 455554
No 72
>PRK06158 thiolase; Provisional
Probab=28.97 E-value=53 Score=32.58 Aligned_cols=30 Identities=40% Similarity=0.603 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEccc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~ 272 (324)
.-|+.+|+++||+|||++++ +++ ++++|+.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~---dID----~iv~~~~ 58 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMA---DVD----GLFTASP 58 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEecC
Confidence 46788999999999999763 343 4555553
No 73
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=28.66 E-value=52 Score=32.73 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
..|+.+++++||+|+|++++ +++ .|++|+..
T Consensus 33 ~~L~~~a~~~AL~~agl~~~---dID----~vi~g~~~ 63 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPE---EID----DIITGCAL 63 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----eeEEEeec
Confidence 56788999999999999874 455 46666644
No 74
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=28.59 E-value=54 Score=32.61 Aligned_cols=29 Identities=38% Similarity=0.547 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGS 271 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt 271 (324)
.-|+.+|+.+||+|||++++ +++ ++++++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~---dID----~iv~~~ 53 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWD---DID----AVVVGK 53 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEec
Confidence 45789999999999999763 444 566665
No 75
>KOG3308 consensus Uncharacterized protein of the uridine kinase family [Nucleotide transport and metabolism]
Probab=28.12 E-value=58 Score=30.34 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=31.3
Q ss_pred CcEEEEecceeCCCCCC-HHHHHHHHHcCCCCceeCCCCCC
Q 020557 165 KRVVVTGMGLVSPLGHE-PDVFYNNLLEGVSGISEIETFDC 204 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d-~defWe~Ll~G~sgIs~i~rfd~ 204 (324)
+++.|+|++++|..|.+ +......++.|-+-|.+-+-|.+
T Consensus 2 ~K~~ivgiSG~TnsGKTTLak~l~~~f~~~~lIhqDDFyKp 42 (225)
T KOG3308|consen 2 MKTLIVGISGCTNSGKTTLAKSLHRFFPGCSLIHQDDFYKP 42 (225)
T ss_pred ceEEEEEeecccCCCHhHHHHHHHHHccCCeeeccccccCc
Confidence 45899999999999964 67777888888887777655544
No 76
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=26.10 E-value=62 Score=32.01 Aligned_cols=20 Identities=15% Similarity=-0.066 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhCCCCcc
Q 020557 236 MLYLLTAGKKALADGGITED 255 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~ 255 (324)
..|+.+++++||+|+|++++
T Consensus 27 ~~L~~~a~~~al~dagl~~~ 46 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPA 46 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHH
Confidence 45789999999999999873
No 77
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=26.06 E-value=92 Score=30.71 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHhCCCCc
Q 020557 235 FMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~ 254 (324)
..-|+.+|+++||+++|+++
T Consensus 96 ~~~La~~Aa~~aL~~agi~~ 115 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDP 115 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCH
Confidence 56789999999999999976
No 78
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=24.87 E-value=1.5e+02 Score=29.98 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.++.++||+|+|++++ +++ .|++|...
T Consensus 30 ~eL~~~a~~~al~~agl~~~---~ID----~vi~G~~~ 60 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPE---LIE----QLVFGQVV 60 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEeccC
Confidence 45678999999999999873 444 57888753
No 79
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=24.74 E-value=1.1e+02 Score=29.15 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
..-|+..|+++||+++|++++ +++ -|++++...+
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~---~Id----~li~~t~~~d 85 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERS---DIA----LTLLATSTPD 85 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEECCCCC
Confidence 357899999999999999863 332 3566676543
No 80
>PRK04262 hypothetical protein; Provisional
Probab=24.49 E-value=79 Score=30.65 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
...|+.+|+.+||+|+|++++ +++ .|++++..+.
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~---dId----~li~~s~~~~ 84 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPK---EIG----AVYVGSESHP 84 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCCC
Confidence 467899999999999999863 343 3566766544
No 81
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=24.46 E-value=76 Score=32.31 Aligned_cols=31 Identities=29% Similarity=0.363 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccc--cCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNE--LDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~--~~~~r~GV~vGt~~ 273 (324)
.-|+.+++++||+|+|++++ + ++ +|++|...
T Consensus 49 ~eL~~~a~~~al~~agl~~~---d~~ID----~vi~G~~~ 81 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGK---AALVD----KVVVGNFL 81 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCCcC----EEEEEecc
Confidence 56788999999999999863 3 43 45666543
No 82
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=24.08 E-value=1.6e+02 Score=29.57 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG 274 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~G 274 (324)
..|+.++.++||+|+|++++ +++ .|++|...+
T Consensus 28 ~~L~~~a~~~al~~agi~~~---~Id----~vv~G~~~~ 59 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPA---LVN----EVILGQVIT 59 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HcC----EEEEEecCc
Confidence 45678999999999999873 444 377776553
No 83
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=23.58 E-value=74 Score=31.71 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcc
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGS 271 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt 271 (324)
..|+.+++++||+|||++++ +++ +|++|.
T Consensus 26 ~~L~~~a~~~al~dAgl~~~---~ID----~vv~g~ 54 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPA---LVQ----EVFFGN 54 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEe
Confidence 56789999999999999863 444 466665
No 84
>PLN02287 3-ketoacyl-CoA thiolase
Probab=22.31 E-value=85 Score=32.17 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.+|+++||+|+|++++ +++ +|++|+..
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~---dID----~vv~G~~~ 102 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPS---EVG----DIVVGTVL 102 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeec
Confidence 56788999999999999863 444 46667654
No 85
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=22.11 E-value=1.8e+02 Score=29.06 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.+++++||+|+|+.++ +++ .|++|+..
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~---dID----~vi~g~~~ 58 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEG---PID----DLIIGCAM 58 (391)
T ss_pred HHHHHHHHHHHHHhcCCChh---HCC----EEEEEecc
Confidence 56788999999999987542 343 47788654
No 86
>PRK09051 beta-ketothiolase; Provisional
Probab=21.72 E-value=89 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.+|+++||+|+|++++ +++ .|++|+..
T Consensus 28 ~eL~~~A~~~AL~~agi~~~---dID----~vi~g~~~ 58 (394)
T PRK09051 28 TDLGATVVREALARAGVDPD---QVG----HVVFGHVI 58 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HcC----EEEEeeec
Confidence 56788999999999999873 343 35666544
No 87
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=20.89 E-value=97 Score=30.92 Aligned_cols=31 Identities=23% Similarity=0.299 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccC
Q 020557 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~ 273 (324)
.-|+.+|+++||+|+|++++ +++ .|++|+..
T Consensus 27 ~eLa~~A~~~aL~~agl~~~---dID----~vi~g~~~ 57 (393)
T PRK08235 27 TELGGIAIKEALERANVSAE---DVE----EVIMGTVL 57 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecc
Confidence 45788999999999999873 343 46666653
No 88
>PLN02377 3-ketoacyl-CoA synthase
Probab=20.23 E-value=2.5e+02 Score=29.34 Aligned_cols=25 Identities=8% Similarity=0.069 Sum_probs=20.5
Q ss_pred hcCCHhHHHHHHHHHHHHHhCCCCc
Q 020557 230 KRMDKFMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 230 r~mDp~~rlaL~AA~eALeDAGl~~ 254 (324)
........++..|+.+||+++|+++
T Consensus 167 ~~~~ea~~l~~~A~~~aL~kaGi~p 191 (502)
T PLN02377 167 AAREEAEQVMFGALDNLFANTNVNP 191 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 3344577889999999999999986
No 89
>PF11248 DUF3046: Protein of unknown function (DUF3046); InterPro: IPR021408 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=20.05 E-value=46 Score=25.07 Aligned_cols=28 Identities=18% Similarity=0.345 Sum_probs=23.1
Q ss_pred cEEEEecceeCCC-----CCCHHHHHHHHHcCC
Q 020557 166 RVVVTGMGLVSPL-----GHEPDVFYNNLLEGV 193 (324)
Q Consensus 166 rVvITGmG~vtPl-----G~d~defWe~Ll~G~ 193 (324)
.-|+.++|++|+. |.++.+.|.+|.+--
T Consensus 25 dhvL~~LGgrT~~eAL~~G~dpr~VW~AlC~~~ 57 (63)
T PF11248_consen 25 DHVLSELGGRTAAEALEAGVDPRDVWRALCDAF 57 (63)
T ss_pred hcchhhcCCcCHHHHHHcCCCHHHHHHHHHHHc
Confidence 4788999999874 889999999997643
No 90
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=20.04 E-value=95 Score=31.45 Aligned_cols=20 Identities=25% Similarity=0.135 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhCCCCcc
Q 020557 236 MLYLLTAGKKALADGGITED 255 (324)
Q Consensus 236 ~rlaL~AA~eALeDAGl~~~ 255 (324)
.-|+.+|+.+||+|||++++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~ 57 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLA 57 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHH
Confidence 46789999999999999863
Done!