Query 020557
Match_columns 324
No_of_seqs 207 out of 1217
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 04:47:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020557.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020557hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gfva1 c.95.1.1 (A:2-251) Bet 100.0 3.2E-31 2.4E-35 241.0 17.2 158 164-324 1-159 (250)
2 d1tqyb1 c.95.1.1 (B:2-209) Act 100.0 2.2E-31 1.6E-35 235.1 13.4 154 167-323 2-156 (208)
3 d1ox0a1 c.95.1.1 (A:-5-251) Be 100.0 8.4E-31 6.1E-35 238.2 16.5 160 162-324 6-166 (256)
4 d1j3na1 c.95.1.1 (A:1-249) Bet 100.0 1.8E-30 1.3E-34 236.2 15.7 156 164-323 1-157 (249)
5 d1e5ma1 c.95.1.1 (A:6-255) Bet 100.0 4.7E-29 3.4E-33 225.0 16.6 158 164-324 1-159 (250)
6 d1tqya1 c.95.1.1 (A:3-218) Act 100.0 3.7E-29 2.7E-33 221.6 13.2 156 165-323 1-163 (216)
7 d2vbaa1 c.95.1.1 (A:1-253) Bet 99.9 6.4E-26 4.7E-30 204.6 10.5 157 164-323 1-159 (253)
8 d2ix4a1 c.95.1.1 (A:31-300) Be 99.9 2.2E-21 1.6E-25 174.8 13.4 158 165-324 1-176 (270)
9 d1teda_ c.95.1.2 (A:) Polyketi 78.6 2.2 0.00016 38.0 7.3 20 235-254 92-111 (372)
10 d1ub7a1 c.95.1.2 (A:2-173) Ket 67.8 3 0.00022 33.2 4.9 20 235-254 49-68 (172)
11 d1wdkc1 c.95.1.1 (C:2-263) Fat 42.1 8.3 0.0006 32.8 3.5 16 163-179 3-18 (262)
12 d1u6ea1 c.95.1.2 (A:-10-174) K 31.3 21 0.0015 28.0 4.2 34 235-275 61-94 (184)
13 d1u0ma1 c.95.1.2 (A:2-201) Put 30.7 12 0.00084 30.3 2.4 21 235-255 75-95 (200)
14 d1hnja1 c.95.1.2 (A:1-174) Ket 28.6 25 0.0018 27.4 4.2 35 235-276 51-85 (174)
15 d1bi5a1 c.95.1.2 (A:1-235) Cha 25.3 28 0.002 28.6 4.0 34 235-275 102-135 (235)
16 d1mzja1 c.95.1.2 (A:3-183) Pri 23.8 30 0.0022 27.2 3.7 35 235-276 58-92 (181)
No 1
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=3.2e-31 Score=241.04 Aligned_cols=158 Identities=33% Similarity=0.561 Sum_probs=146.3
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
+|||||||||+++|+|.++++||++|++|+++|+++++|+.+.++.+++++|++|++.+++.+++.+.|||+++|++.++
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
++||+|||+.. ++++..++||++|++.++....+..+..+. .+...++|+.++..++|+++++|++.||++||++|
T Consensus 81 ~~Al~dAg~~~---~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t 157 (250)
T d2gfva1 81 VQAMQDSGLEI---TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS 157 (250)
T ss_dssp HHHHHHHTCCC---CTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHhcCCCc---cccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence 99999999986 367788999999999999988887776665 35677899999999999999999999999999999
Q ss_pred cC
Q 020557 323 QY 324 (324)
Q Consensus 323 V~ 324 (324)
|.
T Consensus 158 v~ 159 (250)
T d2gfva1 158 IA 159 (250)
T ss_dssp CC
T ss_pred cc
Confidence 83
No 2
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.97 E-value=2.2e-31 Score=235.12 Aligned_cols=154 Identities=20% Similarity=0.310 Sum_probs=144.4
Q ss_pred EEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHHHH
Q 020557 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKA 246 (324)
Q Consensus 167 VvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~eA 246 (324)
|||||||+++|+|.|+++||++|++|+++|+++++|+.+.++.+++|++++|++..++++++.+.|||+++|++.++.||
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~A 81 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADWA 81 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHHH
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhcccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred HHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCccccc
Q 020557 247 LADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFPQ 323 (324)
Q Consensus 247 LeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~TV 323 (324)
|+|||+++ ++....++|+++|++.|+++..++.++.+.+ ..+.++|+.++..++|+.+++|++.||++||++||
T Consensus 82 l~~Ag~~~---~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv 156 (208)
T d1tqyb1 82 LQDAKADP---ESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSAL 156 (208)
T ss_dssp HHHTTCCG---GGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEE
T ss_pred chhhhccc---ccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeec
Confidence 99999987 3677889999999999999998888887764 55678999999999999999999999999999987
No 3
>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}
Probab=99.97 E-value=8.4e-31 Score=238.24 Aligned_cols=160 Identities=35% Similarity=0.584 Sum_probs=147.6
Q ss_pred CCCCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHH
Q 020557 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (324)
Q Consensus 162 ~~~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~ 241 (324)
|.++||||||||+++|+|.++|+||++|++|+++|+++++|+...+...+++.++++++..++.++..++||+++++++.
T Consensus 6 m~m~RVvItG~G~v~p~G~~~e~~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~ 85 (256)
T d1ox0a1 6 MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALY 85 (256)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHH
T ss_pred ccCCcEEEECcEEECCCcCCHHHHHHHHHcCCCeeecCCcccccccCccccccccccccccccccccccccChHHhhhhh
Confidence 45689999999999999999999999999999999999999999999999999998888777889999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHh-hccCCCCcccccccChHHHHHHHHHhCCCCcc
Q 020557 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLVSLNLL 320 (324)
Q Consensus 242 AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~-~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs 320 (324)
+++|||+||||+. +.++..|+||++|++.++.....+.++.+.+ +.++++|+.++..++|+++++||+.|||+||+
T Consensus 86 aa~~Al~dAgl~~---~~~~~~r~gv~~Gs~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~ 162 (256)
T d1ox0a1 86 AAQEAVNHANLDV---EALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVC 162 (256)
T ss_dssp HHHHHHHHTTCCT---TTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred hhhhhHhhhCCCc---cccCCCceEEEEecccCCcccchhhhhhhhhcCccccCcceeccccccHHHHHHHHHHCCCCCc
Confidence 9999999999986 4677899999999999999988888877664 67889999999999999999999999999999
Q ss_pred cccC
Q 020557 321 FPQY 324 (324)
Q Consensus 321 ~TV~ 324 (324)
+||.
T Consensus 163 ~tv~ 166 (256)
T d1ox0a1 163 KSIN 166 (256)
T ss_dssp ECCC
T ss_pred cccc
Confidence 9973
No 4
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=1.8e-30 Score=236.16 Aligned_cols=156 Identities=33% Similarity=0.604 Sum_probs=142.4
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
|+||||||||+++|+|.|+++||++|++|+++|+++++|+...++..+.+.+ ++++..++++++.+.|||++++++.++
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCccccccc-cccccccccHHHHhhCCHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999998888876 466667789999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
+|||+||||++ ++++..|+|||+|++.|++.....++.... .+...++|+.++..+.|+++++|++.||++||++|
T Consensus 80 ~~Al~dAGl~~---~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t 156 (249)
T d1j3na1 80 QLALEDAGLKP---EDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST 156 (249)
T ss_dssp HHHHHHHTCCG---GGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred HHHHHHcCCCh---hHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence 99999999987 467788999999999999988887776655 46678899999999999999999999999999999
Q ss_pred c
Q 020557 323 Q 323 (324)
Q Consensus 323 V 323 (324)
|
T Consensus 157 v 157 (249)
T d1j3na1 157 V 157 (249)
T ss_dssp B
T ss_pred c
Confidence 7
No 5
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}
Probab=99.96 E-value=4.7e-29 Score=224.99 Aligned_cols=158 Identities=34% Similarity=0.600 Sum_probs=145.5
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
+|||||||||+++|+|.|+|+||++|++|+++|+++++|+...++.++.|.|+++++.+.+++++.+.|||++++++.++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 80 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999887777799999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHHHHHHHHHhCCCCcccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLFP 322 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~T 322 (324)
++||+||||+. +.+...++||++|++.++...+...+..+. ++....+++.+...+.+.++++|++.||++||++|
T Consensus 81 ~~Al~~Agl~~---~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (250)
T d1e5ma1 81 QQAINDAKLVI---NELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 157 (250)
T ss_dssp HHHHHHHTCCC---CTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCCCh---HhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence 99999999986 467789999999999999988888777665 35677889999999999999999999999999999
Q ss_pred cC
Q 020557 323 QY 324 (324)
Q Consensus 323 V~ 324 (324)
|.
T Consensus 158 v~ 159 (250)
T d1e5ma1 158 TV 159 (250)
T ss_dssp CC
T ss_pred cc
Confidence 73
No 6
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.96 E-value=3.7e-29 Score=221.58 Aligned_cols=156 Identities=22% Similarity=0.321 Sum_probs=137.8
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHHH
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA~ 244 (324)
|||||||||+++|+|.++++||++|++|+++|++++.|+.+++...+++.++.+...+++++++.+.||++++|++.+++
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~ 80 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR 80 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcccCcchhhHHHHHH
Confidence 68999999999999999999999999999999999999988888887777653333445999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHHhh-------ccCCCCcccccccChHHHHHHHHHhCCC
Q 020557 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-------YKKMNPFCVPFATTNMGSAMLAMDLVSL 317 (324)
Q Consensus 245 eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~~~-------~~~~~p~~~~~~l~n~iA~rVS~~lGl~ 317 (324)
|||+||||++ +++...++|+++|++.++...+++.+..+.+. ...+.++.++..++|+++++||+.||++
T Consensus 81 ~Al~dAg~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~ 157 (216)
T d1tqya1 81 EAFAASGLDP---DTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE 157 (216)
T ss_dssp HHHHHHTCCT---TTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHhcCCc---cccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCcc
Confidence 9999999986 36778999999999999999988888877532 2356678888889999999999999999
Q ss_pred Cccccc
Q 020557 318 NLLFPQ 323 (324)
Q Consensus 318 GPs~TV 323 (324)
||++||
T Consensus 158 Gp~~tv 163 (216)
T d1tqya1 158 GPVTMV 163 (216)
T ss_dssp SCEEEE
T ss_pred ccceee
Confidence 999987
No 7
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}
Probab=99.92 E-value=6.4e-26 Score=204.56 Aligned_cols=157 Identities=25% Similarity=0.409 Sum_probs=136.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcceeeecCCCCCCCCCChhhhhcCCHhHHHHHHHH
Q 020557 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (324)
Q Consensus 164 ~~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~~~~~~~~~G~I~dFd~~~~Isp~ear~mDp~~rlaL~AA 243 (324)
|+||||||||+++|+|.++++||++|++|+++|+++++|+...++....+.++ +++..++..++.+.+++..++.+.++
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM 79 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCccccccccc-ccccccccchhhccchhhhhhhhHHH
Confidence 47899999999999999999999999999999999999888888888888775 44556688899999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH--hhccCCCCcccccccChHHHHHHHHHhCCCCccc
Q 020557 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLVSLNLLF 321 (324)
Q Consensus 244 ~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~--~~~~~~~p~~~~~~l~n~iA~rVS~~lGl~GPs~ 321 (324)
.+|++|+|+..+ ...+..|+||++|+..|+.......+..+. ++...++|+.++..+.|+++++|++.||++||++
T Consensus 80 ~~a~~~~~l~~~--~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~ 157 (253)
T d2vbaa1 80 EQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (253)
T ss_dssp HHHHHHHTCCHH--HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHHhhccch--hccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence 999999999764 235678999999999999887666555443 2456678999999999999999999999999999
Q ss_pred cc
Q 020557 322 PQ 323 (324)
Q Consensus 322 TV 323 (324)
+|
T Consensus 158 ~i 159 (253)
T d2vbaa1 158 SI 159 (253)
T ss_dssp EE
T ss_pred ee
Confidence 87
No 8
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}
Probab=99.85 E-value=2.2e-21 Score=174.80 Aligned_cols=158 Identities=29% Similarity=0.447 Sum_probs=121.9
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCCceeCCCCCC--C------------CCCcceeeecCCCCCCCCCChhh--
Q 020557 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--T------------SFPTKIAAEIKSFSTDGWVAPKL-- 228 (324)
Q Consensus 165 ~rVvITGmG~vtPlG~d~defWe~Ll~G~sgIs~i~rfd~--~------------~~~~~~~G~I~dFd~~~~Isp~e-- 228 (324)
|||||||||+++|+|.++|+||++|++|+++|++++.++. . ..+.+++++++++.....+..+.
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 5899999999999999999999999999999999975432 2 33567788887543322233333
Q ss_pred -hhcCCHhHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCchHHHHHHHHHHH-hhccCCCCcccccccChHH
Q 020557 229 -SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMG 306 (324)
Q Consensus 229 -ar~mDp~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~~~~~~~~~~l~-~~~~~~~p~~~~~~l~n~i 306 (324)
...+++..+.++.+..+|++|+++... ......+++|.++...++............ .......|+.+++.+.|++
T Consensus 81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (270)
T d2ix4a1 81 NSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA 158 (270)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHHTTCCCC--SHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhccc--cccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence 446778888899999999999997542 234456788888887777665555544443 3567789999999999999
Q ss_pred HHHHHHHhCCCCcccccC
Q 020557 307 SAMLAMDLVSLNLLFPQY 324 (324)
Q Consensus 307 A~rVS~~lGl~GPs~TV~ 324 (324)
+++|++.||++||++||.
T Consensus 159 a~~is~~~~l~Gp~~~v~ 176 (270)
T d2ix4a1 159 SGHVSMKYGFQGPNHAAV 176 (270)
T ss_dssp HHHHHHHHTCCSCEECBC
T ss_pred HHHHHHHhCCCCCCcccc
Confidence 999999999999999984
No 9
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=78.64 E-value=2.2 Score=37.97 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHHHhCCCCc
Q 020557 235 FMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~ 254 (324)
..-|+..|+.+||+++|+++
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~ 111 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRA 111 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHHHHHHHHcCCCH
Confidence 44689999999999999986
No 10
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=67.84 E-value=3 Score=33.23 Aligned_cols=20 Identities=10% Similarity=-0.225 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHhCCCCc
Q 020557 235 FMLYLLTAGKKALADGGITE 254 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~ 254 (324)
..-++..|+.+||+++|+++
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~ 68 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGAL 68 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTT
T ss_pred ccHHHHHHHHHHHhhcCccc
Confidence 45778899999999999986
No 11
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}
Probab=42.11 E-value=8.3 Score=32.84 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=12.7
Q ss_pred CCCcEEEEecceeCCCC
Q 020557 163 KQKRVVVTGMGLVSPLG 179 (324)
Q Consensus 163 ~~~rVvITGmG~vtPlG 179 (324)
..++|||+| +.+||.|
T Consensus 3 n~r~v~Iv~-a~RTP~g 18 (262)
T d1wdkc1 3 NPRDVVIVD-FGRTPMG 18 (262)
T ss_dssp CTTCEEEEE-EEECCCE
T ss_pred CCCcEEEEe-eeeCcee
Confidence 457799999 6688887
No 12
>d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.29 E-value=21 Score=28.04 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
..-++..|+.+||+++|+.++ +++ -|++++..+.
T Consensus 61 ~~~ma~~Aa~~al~~ag~~~~---dId----llI~~t~t~~ 94 (184)
T d1u6ea1 61 AASMATEACRRALSNAGLSAA---DID----GVIVTTNTHF 94 (184)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCC
T ss_pred hhHHHHHHHHHHHHhcccCcc---cce----EEEEeeccCc
Confidence 456889999999999999873 333 2555555443
No 13
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=30.72 E-value=12 Score=30.30 Aligned_cols=21 Identities=14% Similarity=0.070 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHhCCCCcc
Q 020557 235 FMLYLLTAGKKALADGGITED 255 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~ 255 (324)
...|+..|+.+||+++|++++
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~ 95 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLAT 95 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHHcCCChh
Confidence 445899999999999999873
No 14
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=28.64 E-value=25 Score=27.36 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCch
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 276 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~ 276 (324)
...++..|+.+||+++|++++ +++ -|++++..+.+
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~---~Id----~li~~s~~~~~ 85 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKD---QIG----LIVVATTSATH 85 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCSC
T ss_pred chHHHHHHHHHhhhhcccccc---ccc----EEEEecCCccc
Confidence 456899999999999999873 333 25666665543
No 15
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=25.25 E-value=28 Score=28.64 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCc
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg 275 (324)
...|+..|+.+||+++|++++ +++ .|++.|+.+.
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~---dId----~lI~~t~t~~ 135 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKS---KIT----HLIVCTTSGV 135 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHcCCChh---HCc----EEEEecccCC
Confidence 446899999999999999863 332 3555565543
No 16
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=23.79 E-value=30 Score=27.16 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccCCCceEEEEcccCCch
Q 020557 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 276 (324)
Q Consensus 235 ~~rlaL~AA~eALeDAGl~~~~~~~~~~~r~GV~vGt~~Gg~ 276 (324)
..-|+.+|+.+||+++|++++ +++ .|++++..+.+
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~---dId----~li~~s~~~~~ 92 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPA---EID----LVVVSTMTNFV 92 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCCC
T ss_pred HHHHhHHHHHhhhhhccCChh---HCe----EEEEeccCCcc
Confidence 456899999999999999873 333 35666665543
Done!