BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020561
(324 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 15/205 (7%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
+L++F+ +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----------ADGTLVAVKRLKEE 73
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
QG + ++ EV + VH NL++L G+C+ +RLLVY +M GS+ + L R
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD ++ A + DFGLAK
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMT 315
D HV V GT G+ APEY+ T
Sbjct: 194 YKD-XHVXXAVRGTIGHIAPEYLST 217
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 15/205 (7%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
+L++F+ +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL----------ADGXLVAVKRLKEE 65
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
QG + ++ EV + VH NL++L G+C+ +RLLVY +M GS+ + L R
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD ++ A + DFGLAK
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMT 315
D HV V G G+ APEY+ T
Sbjct: 186 YKD-XHVXXAVRGXIGHIAPEYLST 209
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 18/206 (8%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 286 AKDGPEGDKTHVSTRVMGTYGYAAPE 311
A+ + +T + +R++GT Y APE
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 18/206 (8%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 286 AKDGPEGDKTHVSTRVMGTYGYAAPE 311
A+ + +T + R++GT Y APE
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 118/195 (60%), Gaps = 16/195 (8%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
E+ L H +LV LIG+C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
+I +GAA+GL +LH R +I+RD K+ NILLD ++ K++DFG++K G E D+TH+
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 300 RVMGTYGYAAPEYVM 314
V GT GY PEY +
Sbjct: 200 VVKGTLGYIDPEYFI 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 18/206 (8%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 63
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 64 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 286 AKDGPEGDKTHVSTRVMGTYGYAAPE 311
A+ + + + R++GT Y APE
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPE 199
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
E+ L H +LV LIG+C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
+I +GAA+GL +LH R +I+RD K+ NILLD ++ K++DFG++K G E +TH+
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 300 RVMGTYGYAAPEYVM 314
V GT GY PEY +
Sbjct: 200 VVKGTLGYIDPEYFI 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 111/206 (53%), Gaps = 18/206 (8%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ GEGGFG V+KG++ A K + +
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ H NLV+L+G+ + D LVY + P GSL + L
Sbjct: 61 TEELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL 285
+ PL W R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 170
Query: 286 AKDGPEGDKTHVSTRVMGTYGYAAPE 311
A+ + + +R++GT Y APE
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 29/200 (14%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDGPEGD 293
+++ L A G+ ++ + P+++RD ++ NI L +A AK++DFGL++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS---- 179
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
H + ++G + + APE +
Sbjct: 180 -VHSVSGLLGNFQWMAPETI 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 107/211 (50%), Gaps = 29/211 (13%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDGPEGD 293
+++ L A G+ ++ + P+++RD ++ NI L +A AK++DFG ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS---- 179
Query: 294 KTHVSTRVMGTYGYAAPEYVMTALELFCLKC 324
H + ++G + + APE + E + K
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKA 209
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 29/200 (14%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDGPEGD 293
+++ L A G+ ++ + P+++RD ++ NI L +A AK++DF L++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS---- 179
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
H + ++G + + APE +
Sbjct: 180 -VHSVSGLLGNFQWMAPETI 198
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
+++K G C + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+ I+R+ N+LLD D K+ DFGLAK PEG
Sbjct: 135 SQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
+++K G C + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+ I+R+ N+LLD D K+ DFGLAK PEG
Sbjct: 135 AQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D H+ W E++ L L H
Sbjct: 39 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 196 NLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
+++K G C ED LV E++P GSL ++L R S+ L + + A +G+A+L
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYL 150
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH 296
H + I+RD N+LLD D K+ DFGLAK PEG + +
Sbjct: 151 HAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 31/197 (15%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL----AEVNF 188
E ++G GGFG V++ WI G VAVK HD + + + E
Sbjct: 12 EEIIGIGGFGKVYRAFWI------------GDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L H N++ L G C+++ LV EF G L L + +P I + A+ A+G
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARG 117
Query: 249 LAFLHEEAERPVIYRDFKTSNILL-----DADYN---AKLSDFGLAKDGPEGDKTHVSTR 300
+ +LH+EA P+I+RD K+SNIL+ + D + K++DFGLA++ K +
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-- 175
Query: 301 VMGTYGYAAPEYVMTAL 317
G Y + APE + ++
Sbjct: 176 --GAYAWMAPEVIRASM 190
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L G Q W E+ L L H
Sbjct: 16 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++VK G C + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+ I+R N+LLD D K+ DFGLAK PEG
Sbjct: 129 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L G Q W E+ L L H
Sbjct: 17 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++VK G C + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+ I+R N+LLD D K+ DFGLAK PEG
Sbjct: 130 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LGEG FG V E P TG VAVK+L + H + E+ L +L H
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST---RVMGTYGYAAP 310
R ++RD N+L+++++ K+ DFGL K E DK + R + Y AP
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 311 EYVMTA 316
E +M +
Sbjct: 199 ECLMQS 204
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LGEG FG V E P TG VAVK+L + H + E+ L +L H
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST---RVMGTYGYAAP 310
R ++RD N+L+++++ K+ DFGL K E DK + R + Y AP
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 311 EYVMTA 316
E +M +
Sbjct: 187 ECLMQS 192
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E P + + VAVKTL K++ E L +L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------------LPWSIRMKIAL 243
+VK G C+E D ++V+E+M G L N R P L S + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
A G+ +L A + ++RD T N L+ + K+ DFG+++D D V M
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 304 TYGYAAPEYVM 314
+ PE +M
Sbjct: 193 PIRWMPPESIM 203
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E +P K + VAVK L L K++ E L +L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP----------------LPWSIRMK 240
+VK G C + D ++V+E+M G L N R P L S +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
IA A G+ +L A + ++RD T N L+ A+ K+ DFG+++D D V
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 301 VMGTYGYAAPEYVM 314
M + PE +M
Sbjct: 195 TMLPIRWMPPESIM 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
+LG G FG V+KG W+ E T + VA+K LN G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +LV+L+G C+ +L V + MP G L ++ + + + + AKG+ +L
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
E R +++RD N+L+ + + K++DFGLA+
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
+LG G FG V+KG W+ E T + VA+K LN G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +LV+L+G C+ +L V + MP G L ++ + + + + AKG+ +L
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
E R +++RD N+L+ + + K++DFGLA+
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
+ N + R+ + LG+G FG V E P++ TG VAVK L H +
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
+++ E+ L L H N+VK G C +R L+ E++P GSL ++L + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
++ KG+ +L + I+RD T NIL++ + K+ DFGL K P+
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
+ N + R+ + LG+G FG V E P++ TG VAVK L H +
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
+++ E+ L L H N+VK G C +R L+ E++P GSL ++L + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
++ KG+ +L + I+RD T NIL++ + K+ DFGL K P+
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ EF+P GSL +L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLV 193
+LGEG FG V +G +++ GT L VAVKT+ D + E+L+E + D
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 194 HLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIAL 243
H N+++L+G CIE + +++ FM G L +L L +P +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+ +L + R ++RD N +L D ++DFGL+K GD
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
L A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
L A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 42 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
L A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 96 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
L A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 165
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 173
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
A + ++RD N +LD + K++DFGLA+D E D H T
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 171
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
+ I+R+ T NIL++ + K+ DFGL K P+ DK + + G
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPG 178
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
+ I+RD T NIL++ + K+ DFGL K P+
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 32 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 34 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 55 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 200
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 29 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 174
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 126 LATRNFRPESL-----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
+ R FRP L LG+G FG K E TG + +K L + +
Sbjct: 2 MPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQR 52
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+L EV + L H N++K IG +D + + E++ G+L + PWS R+
Sbjct: 53 TFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS 112
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA------KDGPEG-- 292
A A G+A+LH +I+RD + N L+ + N ++DFGLA K PEG
Sbjct: 113 FAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 293 -----DKTHVSTRVMGTYGYAAPEYV 313
D+ T V+G + APE +
Sbjct: 170 SLKKPDRKKRYT-VVGNPYWMAPEMI 194
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 56 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A + ++RD N +LD + K++DFGLA+D
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 201
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLV 193
+G G FG V + W G VAVK L + E+L EV + L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAF 251
H N+V +G + +V E++ RGSL L + L R+ +A AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
LH P+++RD K+ N+L+D Y K+ DFGL++ + S GT + APE
Sbjct: 153 LHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 312 YV 313
+
Sbjct: 210 VL 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+ L +LH + +I+RD K NIL D + KL+DFG++ + S
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-- 194
Query: 301 VMGTYGYAAPEYVM 314
+GT + APE VM
Sbjct: 195 FIGTPYWMAPEVVM 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 81 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA + +H ++ G+ + APE +
Sbjct: 140 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+ L +LH + +I+RD K NIL D + KL+DFG++ + S
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS-- 194
Query: 301 VMGTYGYAAPEYVM 314
+GT + APE VM
Sbjct: 195 FIGTPYWMAPEVVM 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 81 NILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA + +H ++ G+ + APE +
Sbjct: 140 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLV 193
+G G FG V + W G VAVK L + E+L EV + L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAF 251
H N+V +G + +V E++ RGSL L + L R+ +A AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAP 310
LH P+++R+ K+ N+L+D Y K+ DFGL++ T +S++ GT + AP
Sbjct: 153 LHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAP 208
Query: 311 EYV 313
E +
Sbjct: 209 EVL 211
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+ L +LH + +I+RD K NIL D + KL+DFG++
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--XIQRRDX 194
Query: 301 VMGTYGYAAPEYVM 314
+GT + APE VM
Sbjct: 195 FIGTPYWMAPEVVM 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 127 ATRNFRPES---LLGE-GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
TR+ PE ++GE G FG V+K +E T + A K ++ + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E++ L H N+VKL+ ++ ++ EF G+++ + PL S +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 114
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR-- 300
L +LH+ +I+RD K NIL D + KL+DFG++ + +T + R
Sbjct: 115 KQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDS 168
Query: 301 VMGTYGYAAPEYVM 314
+GT + APE VM
Sbjct: 169 FIGTPYWMAPEVVM 182
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 20 IGSGSFGTVYKGKW---HGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 69 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 36 IGSGSFGTVYKGKW---HGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 84
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 85 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA + +H ++ G+ + APE +
Sbjct: 144 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D +V
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 175 KVPFAWCAPESLKT 188
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 123 S---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D +V
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 175 KVPFAWCAPESLKT 188
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D +V
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 179 KVPFAWCAPESLKT 192
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 92
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 93 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA + +H ++ G+ + APE +
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA + +H ++ G+ + APE +
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D +V
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 179 KVPFAWCAPESLKT 192
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 172
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D +V
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 185 KVPFAWCAPESLKT 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 177
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
KG+ +L R ++RD NIL++++ + K++DFGLAK P DK + R G
Sbjct: 138 KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPG 190
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
KG+ +L R ++RD NIL++++ + K++DFGLAK P DK + R G
Sbjct: 125 KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 180
Query: 307 --YAAPE 311
+ APE
Sbjct: 181 IFWYAPE 187
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
KG+ +L R ++RD NIL++++ + K++DFGLAK P DK + R G
Sbjct: 126 KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 181
Query: 307 --YAAPE 311
+ APE
Sbjct: 182 IFWYAPE 188
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D V
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 174
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 175 KVPFAWCAPESLKT 188
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
FTF D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREI------FVAIK 67
Query: 170 TLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
TL + + ++L+E + +G H N++ L G + +++ EFM GSL++ L +
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK- 287
+ + G A G+ +L A+ ++RD NIL++++ K+SDFGL++
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 288 -DGPEGDKTHVS 298
+ D T+ S
Sbjct: 185 LEDDTSDPTYTS 196
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G +++ E + L H
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 194
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 136 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 305 YGYAAPE 311
+ APE
Sbjct: 193 VRWMAPE 199
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + ++ V E P GSL + L + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ A+G+ +L E++R I+RD N+LL K+ DFGL + P+ D V
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 184
Query: 303 GT-YGYAAPEYVMT 315
+ + APE + T
Sbjct: 185 KVPFAWCAPESLKT 198
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y + LV E++P G L + L R L S + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
KG+ +L R ++RD NIL++++ + K++DFGLAK
Sbjct: 122 KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAK 159
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 305 YGYAAPE 311
+ APE
Sbjct: 196 VRWMAPE 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHE 164
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
+ T Y APE Y TA++++ L C
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 305 YGYAAPE 311
+ APE
Sbjct: 196 VRWMAPE 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGC 192
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGC 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 43 IGSGSFGTVYKGKW---HGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 91
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 92 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 151 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGC 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGC 196
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 92
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 93 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 27/183 (14%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
E ++G G FG V K W ++ VA+K + + + K ++ E+ L +
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 59
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALGAAKGL 249
H N+VKL G C+ + LV E+ GSL N + + PLP+ + M L ++G+
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 250 AFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 308
A+LH + +I+RD K N+LL A K+ DFG A D +TH+ T G+ +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAWM 171
Query: 309 APE 311
APE
Sbjct: 172 APE 174
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 68 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 127 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 27 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 305 YGYAAPE 311
+ +PE
Sbjct: 198 VRWMSPE 204
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 18 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 132 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 305 YGYAAPE 311
+ +PE
Sbjct: 189 VRWMSPE 195
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV EFM G L ++L + + + L +G+A+L E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
VI+RD N L+ + K+SDFG+ + + D+ ST +A+PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 175
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K++NI L D K+ DFGLA +H ++ G+ + APE +
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 27/183 (14%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
E ++G G FG V K W ++ VA+K + + + K ++ E+ L +
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 58
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALGAAKGL 249
H N+VKL G C+ + LV E+ GSL N + + PLP+ + M L ++G+
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 250 AFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 308
A+LH + +I+RD K N+LL A K+ DFG A D +TH+ T G+ +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAWM 170
Query: 309 APE 311
APE
Sbjct: 171 APE 173
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGLA+ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GL+F H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAV 168
+KV +R+ K T R +LG G FG V KG WI E + + V +
Sbjct: 3 MKVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGES------IKIPVCI 47
Query: 169 KTL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF 227
K + + G Q + + +G L H ++V+L+G C +L V +++P GSL +H+
Sbjct: 48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVR 106
Query: 228 RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ L + + + AKG+ +L E +++R+ N+LL + +++DFG+A
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 288 DGPEGDK 294
P DK
Sbjct: 164 LLPPDDK 170
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGC 194
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGC 194
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQ 177
F ++ ++A LG+G FG V++G + G +P T VA+KT+N ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMR 61
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------ 231
E+L E + + + ++V+L+G + L++ E M RG L+++L RSL
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMEN 119
Query: 232 -----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA 286
P S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 287 KDGPEGD 293
+D E D
Sbjct: 177 RDIYETD 183
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGC 193
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 211 NGRLPVKWMAPE 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGC 194
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQG-HKEWLA 184
+ NF+ +GEG +G V+K N TG VA+K + D +G +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 114 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 304 TYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
+ ++G G FG V+KG ++ + P VA+KTL + + ++L E +G
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G + +++ E+M G+L+ L + + + G A G+ +L
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 309
A ++RD NIL++++ K+SDFGL++ D PE T ++ + A
Sbjct: 164 ---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTA 218
Query: 310 PEYV 313
PE +
Sbjct: 219 PEAI 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 305 YGYAAPE 311
+ APE
Sbjct: 196 VRWMAPE 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQG-HKEWLA 184
+ NF+ +GEG +G V+K N TG VA+K + D +G +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 55
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 115 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 169
Query: 304 TYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGC 196
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 138 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 305 YGYAAPE 311
+ APE
Sbjct: 195 VRWMAPE 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGC 193
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGC 194
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQG-HKEWLAEVN 187
NF+ +GEG +G V+K N TG VA+K + D +G + E++
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAA 246
L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 307 YAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGC 193
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 55 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 169 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 211 NGRLPVKWMAPE 222
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 200 NGRLPVKWMAPE 211
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 23 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 137 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 26 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 26 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 203 NGRLPVKWMAPE 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
FTF D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIK 63
Query: 170 TLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
TL + +++L+E + +G H N++ L G + +++ E+M GSL+ L +
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK- 287
+ + G G+ +L + + ++RD NIL++++ K+SDFG+++
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 288 --DGPEGDKTHVSTRVMGTYGYAAPEYV 313
D PE T ++ + APE +
Sbjct: 181 LEDDPEAAYTTRGGKI--PIRWTAPEAI 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 204 NGRLPVKWMAPE 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLT 165
E+ KV +R+ K T R +LG G FG V KG WI E + +
Sbjct: 18 EKANKVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGES------IKIP 62
Query: 166 VAVKTL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN 224
V +K + + G Q + + +G L H ++V+L+G C +L V +++P GSL +
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLD 121
Query: 225 HLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG 284
H+ + L + + + AKG+ +L E +++R+ N+LL + +++DFG
Sbjct: 122 HVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFG 178
Query: 285 LAKDGPEGDK 294
+A P DK
Sbjct: 179 VADLLPPDDK 188
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 27 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 82
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 142
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 143 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 15 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++RD NIL+ + KL DFGL++
Sbjct: 128 IN---CVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 31 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++RD NIL+ + KL DFGL++
Sbjct: 144 IN---CVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 20 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 211 NGRLPVKWMAPE 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 19 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++RD NIL+ + KL DFGL++
Sbjct: 132 IN---CVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAA 309
AE ++RD NIL++++ K+SDFGL++ E T +G + A
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 310 PEYV 313
PE +
Sbjct: 192 PEAI 195
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-----LPLPWSI 237
+ E++ L +L H N+VKL+ +++ LV+EF+ S++ F + +PLP
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 107
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
L +GLAF H V++RD K N+L++ + KL+DFGLA+ +T+
Sbjct: 108 SYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 298 STRVMGTYGYAAPE------YVMTALELFCLKC 324
V T Y APE Y TA++++ L C
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGC 193
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 302 MGTYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+ + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALXKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGC 192
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+ + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALXKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 92
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 152
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 153 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P L +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 196 NGRLPVKWMAPE 207
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 205 NGRLPVKWMAPE 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 252 NGRLPVKWMAPE 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 264 NGRLPVKWMAPE 275
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 207 NGRLPVKWMAPE 218
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 210 NGRLPVKWMAPE 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A A+G+ +L A + I+RD N+L+ D K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 211 NGRLPVKWMAPE 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + +++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 16 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 123 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 152
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL + D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
D+K + + LGEG F V+K + T + + + ++ DG+ ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
L E+ L +L H N++ L+ LV++FM LE + SL L S
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
L +GL +LH+ +++RD K +N+LLD + KL+DFGLAK ++ + V
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 303 GTYGYAAPEYVMTA 316
T Y APE + A
Sbjct: 175 -TRWYRAPELLFGA 187
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 31 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 138 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 167
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 90
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 150 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAA 309
AE ++RD NIL++++ K+SDFGL++ E T +G + A
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 310 PEYV 313
PE +
Sbjct: 190 PEAI 193
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 29 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 78 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 136 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 165
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 71
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 131 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 26 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 75 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 133 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 162
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 30/205 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ + AKG+AFL A + I+RD NILL K+ DFGLA+D
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 296 HVSTRVMGTYGYAAPEYVMTALELF 320
V + APE + + F
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTF 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 30 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 79 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 137 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 22 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 71 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 129 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 30/205 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ + AKG+AFL A + I+RD NILL K+ DFGLA+D
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 296 HVSTRVMGTYGYAAPEYVMTALELF 320
V + APE + + F
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTF 242
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 75
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 135 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 59
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 23 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 72 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 130 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 159
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 301 VMGTYGYAAPEYVM 314
M + PE ++
Sbjct: 197 TMLPIRWMPPESIL 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 301 VMGTYGYAAPEYVM 314
M + PE ++
Sbjct: 191 TMLPIRWMPPESIL 204
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 30/205 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ + AKG+AFL A + I+RD NILL K+ DFGLA+D
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 296 HVSTRVMGTYGYAAPEYVMTALELF 320
V + APE + + F
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTF 249
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 21/169 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 20 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
A G+A+L+ ++RD N + D+ K+ DFG+ +D E D
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Query: 138 GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHL 195
G FGCV+K + + VAVK LQ + W +E + H
Sbjct: 24 ARGRFGCVWKAQLMND-----------FVAVKIFP---LQDKQSWQSEREIFSTPGMKHE 69
Query: 196 NLVKLI-----GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
NL++ I G +E + L+ F +GSL ++L + + W+ +A ++GL+
Sbjct: 70 NLLQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLS 126
Query: 251 FLHE-------EAERPVI-YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+LHE E +P I +RDFK+ N+LL +D A L+DFGLA G + +
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 303 GTYGYAAPEYVMTAL 317
GT Y APE + A+
Sbjct: 187 GTRRYMAPEVLEGAI 201
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 30/205 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ + AKG+AFL A + I+RD NILL K+ DFGLA+D
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 296 HVSTRVMGTYGYAAPEYVMTALELF 320
V + APE + + F
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTF 244
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++R+ N ++ D+ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 305 YGYAAPE 311
+ APE
Sbjct: 196 VRWMAPE 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+E + L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLAF H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 305 YGYAAPE------YVMTALELFCLKC 324
Y APE Y TA++++ L C
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGC 191
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRM-KIALG 244
++V+L+G + L+V E M G L+++L RSL P P M ++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A G+A+L+ + ++R+ N ++ D+ K+ DFG+ +D E D + +
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 305 YGYAAPE 311
+ APE
Sbjct: 197 VRWMAPE 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 35/178 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
+GEG FG VF+ G P +P T VAVK L + ++ E + + +
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------------------------ 231
N+VKL+G C L++E+M G L F RS+
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNE--FLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 232 -PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
PL + ++ IA A G+A+L +ER ++RD T N L+ + K++DFGL+++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG +G V+K +E TG VA+K + + +E + E++ + +
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VK G ++ +V E+ GS+ + + R+ L I KGL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ I+RD K NILL+ + +AKL+DFG+A G D V+GT + APE +
Sbjct: 146 K---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVI 197
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
A+G+AFL A + I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 306 GYAAPEYVMTAL 317
+ APE + +
Sbjct: 227 KWMAPESIFDCV 238
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVN 187
+F +LG+G FG VF +P +G A+K L L+ E +
Sbjct: 29 HFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L D+ H +VKL Y + + +L L+ +F+ G L L + + ++ +A A
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELA 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
GL LH +IYRD K NILLD + + KL+DFGL+K+ + +K S GT
Sbjct: 141 LGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVE 195
Query: 307 YAAPEYV 313
Y APE V
Sbjct: 196 YMAPEVV 202
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 46 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
A+G+AFL A + I+RD N+LL + AK+ DFGLA+D V
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 306 GYAAPEYVMTAL 317
+ APE + +
Sbjct: 219 KWMAPESIFDCV 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 301 VMGTYGYAAPEYVM 314
M + PE ++
Sbjct: 220 TMLPIRWMPPESIL 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V G ++ G V VA+KTL + + ++L E + +G
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDV------AVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+V L G ++V EFM G+L+ L + + + G A G+ +L
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 309
A+ ++RD NIL++++ K+SDFGL++ D PE T ++ + A
Sbjct: 162 ---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTA 216
Query: 310 PEYV 313
PE +
Sbjct: 217 PEAI 220
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKT 295
G A G+ +L + ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V+ G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + +V E+MP G+L ++L + + + +A + + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 148 -KKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
LN+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 193
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G FG V G N VAVK + +D + +LAE + + L H N
Sbjct: 201 IGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHE 254
LV+L+G +E+ L +V E+M +GSL ++L R L +K +L + + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
++RD N+L+ D AK+SDFGL K+ T
Sbjct: 308 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ + +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 27/210 (12%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-LAE 185
++ F+ LG G + V+KG + TG+ VA+K + D +G + E
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIRE 53
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIA-- 242
++ + +L H N+V+L +++ LV+EFM L+ ++ R++ P + + +
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 243 --LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
+GLAF HE +++RD K N+L++ KL DFGLA+ G + +
Sbjct: 113 FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSS 167
Query: 301 VMGTYGYAAPEYVM------TALELFCLKC 324
+ T Y AP+ +M T+++++ C
Sbjct: 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGC 197
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
LN+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G FG V G N VAVK + +D + +LAE + + L H N
Sbjct: 29 IGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHE 254
LV+L+G +E+ L +V E+M +GSL ++L R L +K +L + + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
++RD N+L+ D AK+SDFGL K+ T
Sbjct: 136 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 142 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 17 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+R+ + +NIL+ + K++DFGLA+
Sbjct: 124 --RNYIHRNLRAANILVSDTLSCKIADFGLAR 153
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLA 226
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 227 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG 289
+ A+G+AF+ + R I+RD + +NIL+ A K++DFGLA+ G
Sbjct: 286 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVG 328
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G FG V G N VAVK + +D + +LAE + + L H N
Sbjct: 20 IGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHE 254
LV+L+G +E+ L +V E+M +GSL ++L R L +K +L + + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
++RD N+L+ D AK+SDFGL K+ T
Sbjct: 127 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 164
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G FG V G N VAVK + +D + +LAE + + L H N
Sbjct: 14 IGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHE 254
LV+L+G +E+ L +V E+M +GSL ++L R L +K +L + + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
++RD N+L+ D AK+SDFGL K+ T
Sbjct: 121 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 158
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 62 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K NILL KL DFG A + +GT + APE +
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 222
Query: 314 MTALE 318
+ E
Sbjct: 223 LAMDE 227
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V+K +E TG A K + + ++++ E+ L H
Sbjct: 27 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--- 134
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+ +I+RD K N+L+ + + +L+DFG++ + + S +GT + APE VM
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVM 190
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWL 183
L R +LG G FG V+KG WI P + VA+K L + + +KE L
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + +L+G C+ +L V + MP G L +H+ L + +
Sbjct: 68 DEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCM 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+++L + +++RD N+L+ + + K++DFGLA+
Sbjct: 127 QIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLAR 167
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQG-HKEWLA 184
+ NF+ +GEG +G V+K N TG VA+K + D +G +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTAIR 54
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
E++ L +L H N+VKL+ +++ LV+E + + L+ + +L +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 114 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 304 TYGYAAPE------YVMTALELFCLKC 324
T Y APE Y TA++++ L C
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGC 195
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+RD N L+ ++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 62
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A+G+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 122 QIAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 239
N++ L+G C +D ++ + +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
A+G+ +L A + I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 300 RVMGTYGYAAPE 311
+ APE
Sbjct: 218 NGRLPVKWMAPE 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V+K +E TG A K + + ++++ E+ L H
Sbjct: 19 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--- 126
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+ +I+RD K N+L+ + + +L+DFG++ + + S +GT + APE VM
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVM 182
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 29/191 (15%)
Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLGDLVHLNL 197
G FGCV+K + VAVK +Q + W E V L + H N+
Sbjct: 35 GRFGCVWKAQLLNE-----------YVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENI 80
Query: 198 VKLIGY----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++ IG D L+ F +GSL + F ++ + W+ IA A+GLA+LH
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLH 138
Query: 254 EE------AERPVI-YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
E+ +P I +RD K+ N+LL + A ++DFGLA G + +GT
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 307 YAAPEYVMTAL 317
Y APE + A+
Sbjct: 199 YMAPEVLEGAI 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR------------MK 240
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 23 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+I+RD K NILL KL DFG A + +GT + APE +
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 183
Query: 314 MTALE 318
+ E
Sbjct: 184 LAMDE 188
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 80/192 (41%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
A+G+AFL A + I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 302 MGTYGYAAPEYV 313
+ APE +
Sbjct: 227 RLPVKWMAPESI 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 80/192 (41%), Gaps = 22/192 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
A+G+AFL A + I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 302 MGTYGYAAPEYV 313
+ APE +
Sbjct: 227 RLPVKWMAPESI 238
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 169
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V G ++ G L VA+KTL + + ++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGK------RELPVAIKTLKVGYTEKQRRDFLGEASIMGQF 80
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + ++V E+M GSL+ L + + + G + G+ +L
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 309
+ ++RD NIL++++ K+SDFGL++ D PE T ++ + A
Sbjct: 141 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTA 195
Query: 310 PEYV 313
PE +
Sbjct: 196 PEAI 199
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMKI----------- 241
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 172
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLA 232
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 233 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ A+G+AF+ + R I+RD + +NIL+ A K++DFGLA+
Sbjct: 292 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR 332
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFG AK
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 165
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+ L + +KE L
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIMELREATSPKANKEIL 99
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
AKG+ +L + R +++RD N+L+ + K++DFGLAK
Sbjct: 159 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 35/209 (16%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF- 188
N + L+G G +G V+KG ++E +P VAVK + Q ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQN---FINEKNIY 59
Query: 189 -LGDLVHLNLVKLI--GYCIEDDQR---LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ + H N+ + I + D R LLV E+ P GSL +L + W ++A
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD--WVSSCRLA 117
Query: 243 LGAAKGLAFLHEEAER-----PVI-YRDFKTSNILLDADYNAKLSDFGLA------KDGP 290
+GLA+LH E R P I +RD + N+L+ D +SDFGL+ +
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTALEL 319
G++ + + +GT Y APE + A+ L
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNL 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 228 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+R+ N L+ ++ K++DFGL++
Sbjct: 336 -KKNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLA 59
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 60 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ A+G+AF+ + R I+RD + +NIL+ A K++DFGLA+
Sbjct: 119 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR 159
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 30/205 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ + AKG+AFL A + I+RD NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 296 HVSTRVMGTYGYAAPEYVMTALELF 320
V + APE + + F
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTF 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G G V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQAGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLVY------------------EFMPRGSLENHLFRRSLPLPWS 236
LN+V L+G C + L+V EF+P L++ L L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
I + AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 153 I--CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+R +IYRD K N+LLD D N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+R +IYRD K N+LLD D N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+R +IYRD K N+LLD D N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+R +IYRD K N+LLD D N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 83/198 (41%), Gaps = 24/198 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N+V L+G C L++ E+ G L N L R+ P L +S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
+ A+G+AFL A + I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 300 RVMGTYGYAAPEYVMTAL 317
+ APE + +
Sbjct: 227 NARLPVKWMAPESIFDCV 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 225 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+R+ N L+ ++ K++DFGL++
Sbjct: 333 -KKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 267 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++ I+R+ N L+ ++ K++DFGL++
Sbjct: 375 -KKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGT--APVKPGTGLTVAVKTLNHDGLQGHKEW 182
K + ++F+ LG G FG V NG A + V +K + H
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
E L + H ++++ G + Q ++ +++ G L + L R+S P + A
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYA 112
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
L +LH + +IYRD K NILLD + + K++DFG AK P+ V+ +
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 303 GTYGYAAPEYVMT 315
GT Y APE V T
Sbjct: 165 GTPDYIAPEVVST 177
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEV 186
+F+ +LLG+G F V++ TGL VA+K ++ + + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRAE---------SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L H ++++L Y + + LV E G + +L R P +
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
G+ +LH +++RD SN+LL + N K++DFGLA + H + + GT
Sbjct: 123 TGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 307 YAAPE 311
Y +PE
Sbjct: 178 YISPE 182
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGH 179
+ND+K + ++GEG FG V K I+ K G + A+K + + H
Sbjct: 24 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 69
Query: 180 KEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPA 128
Query: 239 MKIALGAAKGLA---FLHEEA----------ERPVIYRDFKTSNILLDADYNAKLSDFGL 285
IA A L+ LH A ++ I+RD NIL+ +Y AK++DFGL
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 188
Query: 286 AK 287
++
Sbjct: 189 SR 190
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + L H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 288 D 288
D
Sbjct: 207 D 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGH 179
+ND+K + ++GEG FG V K I+ K G + A+K + + H
Sbjct: 14 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 59
Query: 180 KEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPA 118
Query: 239 MKIALGAAKGLA---FLHEEA----------ERPVIYRDFKTSNILLDADYNAKLSDFGL 285
IA A L+ LH A ++ I+RD NIL+ +Y AK++DFGL
Sbjct: 119 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 178
Query: 286 AK 287
++
Sbjct: 179 SR 180
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + L H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 288 D 288
D
Sbjct: 193 D 193
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
+R ++ + + + T+N FR +LG+GGFG V + G K
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
K+ L +VN V + Y E D LV M G L+ H++
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
P + + A GL LH E ++YRD K NILLD + ++SD GLA P
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
EG + RV GT GY APE V
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVV 357
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
+R ++ + + + T+N FR +LG+GGFG V + G K
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
K+ L +VN V + Y E D LV M G L+ H++
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
P + + A GL LH E ++YRD K NILLD + ++SD GLA P
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
EG + RV GT GY APE V
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVV 357
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V G ++ G + VA+KTL + + ++L+E + +G
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + +++ EFM GSL++ L + + + G A G+ +L
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK--DGPEGDKTHVS 298
A+ ++R NIL++++ K+SDFGL++ + D T+ S
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 50
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 51 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 108
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 109 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 151
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 230
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 231 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 289
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
+R A GL +H R V+YRD K +NILLD + ++SD GLA D +
Sbjct: 290 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-K 344
Query: 294 KTHVSTRVMGTYGYAAPEYVMTAL 317
K H S +GT+GY APE + +
Sbjct: 345 KPHAS---VGTHGYMAPEVLQKGV 365
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL 192
E ++G G FG V G ++ G + VA+KTL + +++L+E + +G
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + +++ E+M GSL+ L + + + G G+ +L
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 309
+ + ++RD NIL++++ K+SDFG+++ D PE T ++ + A
Sbjct: 133 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 187
Query: 310 PEYV 313
PE +
Sbjct: 188 PEAI 191
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYN-NST---------KVAVKTLK-PGTMSVQAFLEEANLMKTLQHDK 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLH 253
LV+L +++ ++ EFM +GSL + L + LP I + A+G+A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ I+RD + +N+L+ K++DFGLA+
Sbjct: 127 ---RKNYIHRDLRAANVLVSESLMCKIADFGLAR 157
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 52
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 53 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 111 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 153
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL 192
E ++G G FG V G ++ G + VA+KTL + +++L+E + +G
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + +++ E+M GSL+ L + + + G G+ +L
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 309
+ + ++RD NIL++++ K+SDFG+++ D PE T ++ + A
Sbjct: 127 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 181
Query: 310 PEYV 313
PE +
Sbjct: 182 PEAI 185
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
+++ L+TR +G G FG V+KG W +G VK + V + Q +
Sbjct: 36 SEVMLSTR-------IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQAFR 80
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
EV L H+N++ +GY +D+ +V ++ SL HL + +
Sbjct: 81 N---EVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLID 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
IA A+G+ +LH + +I+RD K++NI L K+ DFGLA + +
Sbjct: 137 IARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 301 VMGTYGYAAPEYV 313
G+ + APE +
Sbjct: 194 PTGSVLWMAPEVI 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
+R A GL +H R V+YRD K +NILLD + ++SD GLA D +
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-K 345
Query: 294 KTHVSTRVMGTYGYAAPEYVMTAL 317
K H S +GT+GY APE + +
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGV 366
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VAVK + +G E+ E + L H
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LVK G C ++ +V E++ G L N+L L S +++ +G+AFL
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
I+RD N L+D D K+SDFG+ +
Sbjct: 125 ---FIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
+R A GL +H R V+YRD K +NILLD + ++SD GLA D +
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-K 345
Query: 294 KTHVSTRVMGTYGYAAPEYVMTAL 317
K H S +GT+GY APE + +
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGV 366
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
+R A GL +H R V+YRD K +NILLD + ++SD GLA D +
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-K 345
Query: 294 KTHVSTRVMGTYGYAAPEYVMTAL 317
K H S +GT+GY APE + +
Sbjct: 346 KPHAS---VGTHGYMAPEVLQKGV 366
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
H N+++L G ++V E+M GSL+ F R+ ++I + + G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGY 307
+L + ++RD N+L+D++ K+SDFGL++ D P+ T ++ +
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRW 220
Query: 308 AAPEYV 313
APE +
Sbjct: 221 TAPEAI 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
+L NF +LG+G FG V ++E TG AVK L D + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + + + C + RL V EF+ G L H+ ++S +
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARF 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L FLH++ +IYRD K N+LLD + + KL+DFG+ K+G T +
Sbjct: 129 YAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TAT 183
Query: 301 VMGTYGYAAPEYVMTAL 317
GT Y APE + L
Sbjct: 184 FCGTPDYIAPEILQEML 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLV 193
L+GEG +G V K ++ TG VA+K + D K + E+ L L
Sbjct: 32 LVGEGSYGMVMKCRNKD---------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H NLV L+ C + + LV+EF+ L++ LF L + + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLD--YQVVQKYLFQIINGIGFC 140
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPE 311
H +I+RD K NIL+ KL DFG A+ G+ V + T Y APE
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPE 194
Query: 312 YVM 314
++
Sbjct: 195 LLV 197
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 92
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 151
Query: 238 R-------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
+ +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
Query: 288 D 288
D
Sbjct: 209 D 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 116
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 175
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
Query: 288 D 288
D
Sbjct: 233 D 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 131 FRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
RPE +LG+GG+G VF+ + + A + V K + + AE
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
N L ++ H +V LI Y + +L L+ E++ G L L R + + + +A
Sbjct: 72 RNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-E 129
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMG 303
+ L LH++ +IYRD K NI+L+ + KL+DFGL K+ +G TH G
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCG 183
Query: 304 TYGYAAPEYVMTA 316
T Y APE +M +
Sbjct: 184 TIEYMAPEILMRS 196
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 93
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 152
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
Query: 288 D 288
D
Sbjct: 210 D 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + + H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 288 D 288
D
Sbjct: 207 D 207
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 288 D 288
D
Sbjct: 192 D 192
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 102
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 161
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
Query: 288 D 288
D
Sbjct: 219 D 219
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 288 D 288
D
Sbjct: 192 D 192
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 238 R-------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
+ +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 288 D 288
D
Sbjct: 193 D 193
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 67
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 126
Query: 238 R-------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
+ +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
Query: 288 D 288
D
Sbjct: 184 D 184
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 82
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 141
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
Query: 288 D 288
D
Sbjct: 199 D 199
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 227
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 228 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 285
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 286 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVYSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
S+ M +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 288 D 288
D
Sbjct: 207 D 207
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 227
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 228 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 285
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 286 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
H N+++L G ++V E+M GSL+ F R+ ++I + + G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGY 307
+L + ++RD N+L+D++ K+SDFGL++ D P+ T ++ +
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRW 220
Query: 308 AAPEYV 313
APE +
Sbjct: 221 TAPEAI 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 54
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 55 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 112
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 113 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 155
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL---NHDGLQGHKE 181
K+ ++ LG GG V ++ E+ +K VA+K + + + K
Sbjct: 7 KIINERYKIVDKLGGGGMSTV---YLAEDTILNIK------VAIKAIFIPPREKEETLKR 57
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
+ EV+ L H N+V +I EDD LV E++ +L ++ PL +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINF 116
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
G+ H+ +++RD K NIL+D++ K+ DFG+AK E T + V
Sbjct: 117 TNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHV 172
Query: 302 MGTYGYAAPE 311
+GT Y +PE
Sbjct: 173 LGTVQYFSPE 182
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 51
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 52 QEAQVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 109
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 110 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 238 R-------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGLAK 287
+ +A A G +L E I+RD N LL AK+ DFG+A+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
Query: 288 D 288
D
Sbjct: 193 D 193
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 83/201 (41%), Gaps = 31/201 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 39 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--------------------P 234
N+V L+G C L++ E+ G L N L R++ + P
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 235 WSIR--MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+R + + A+G+AFL A + I+RD N+LL + AK+ DFGLA+D
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V + APE +
Sbjct: 212 SNYIVKGNARLPVKWMAPESI 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 310
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 311 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 368
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 369 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
+GEG +G V+K K G VA+K + D + E++ L +L H
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAFLH 253
N+V LI + LV+EFM + L+ L L S ++KI L +G+A H
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAHCH 136
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +++RD K N+L+++D KL+DFGLA+ G T + T Y AP+ +
Sbjct: 137 QHR---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVL 191
Query: 314 M------TALELFCLKC 324
M T+++++ + C
Sbjct: 192 MGSKKYSTSVDIWSIGC 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGDL 192
+GEG +G V+K K G VA+K + D G+ + E++ L +L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAF 251
H N+V LI + LV+EFM + L+ L L S ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
H+ +++RD K N+L+++D KL+DFGLA+ G T + T Y AP+
Sbjct: 135 CHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPD 189
Query: 312 YVM------TALELFCLKC 324
+M T+++++ + C
Sbjct: 190 VLMGSKKYSTSVDIWSIGC 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLAR 162
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 130 NFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
RPE +LG+GG+G VF+ + + A + V K + + A
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E N L ++ H +V LI Y + +L L+ E++ G L L R + + + +A
Sbjct: 71 ERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVM 302
+ L LH++ +IYRD K NI+L+ + KL+DFGL K+ +G TH
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX---FC 182
Query: 303 GTYGYAAPEYVMTA 316
GT Y APE +M +
Sbjct: 183 GTIEYMAPEILMRS 196
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGH 179
+ND+K + ++GEG FG V K I+ K G + A+K + + H
Sbjct: 21 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 66
Query: 180 KEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPA 125
Query: 239 MKIALGAAKGLA---FLHEEA----------ERPVIYRDFKTSNILLDADYNAKLSDFGL 285
IA A L+ LH A ++ I+R+ NIL+ +Y AK++DFGL
Sbjct: 126 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGL 185
Query: 286 AK 287
++
Sbjct: 186 SR 187
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 20/190 (10%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEV 186
NFR E +G G F V++ +G + VA+K + L K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDG---------VPVALKKVQIFDLMDAKARADCIKEI 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE---NHLFRRSLPLPWSIRMKIAL 243
+ L L H N++K IED++ +V E G L H ++ +P K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
L +H R V++RD K +N+ + A KL D GL + KT + ++G
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVG 198
Query: 304 TYGYAAPEYV 313
T Y +PE +
Sbjct: 199 TPYYMSPERI 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +G L + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 59 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 118 AQI--ASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 227
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 228 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM- 285
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 286 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 59 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 118 AQI--ASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H++ +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 274 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
AD N K++DFG + + G+K G+ YAAPE
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +G L + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGLA+
Sbjct: 120 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H++ +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 274 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
AD N K++DFG + + G+K G+ YAAPE
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLA 184
N++ LGEG FG V + TG VA+K +N +QG E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+A H+ +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 124 SAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 175
Query: 305 YGYAAPEYV 313
YAAPE +
Sbjct: 176 PNYAAPEVI 184
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLA 184
N++ LGEG FG V + TG VA+K +N +QG E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+A H+ +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 123 SAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 174
Query: 305 YGYAAPEYV 313
YAAPE +
Sbjct: 175 PNYAAPEVI 183
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
LV+L ++ ++ E+M +GSL + L + LP I + A+G+A++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ I+RD + +N+L+ K++DFGLA+
Sbjct: 128 R---KNYIHRDLRAANVLVSESLMCKIADFGLAR 158
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLA 184
N++ LGEG FG V + TG VA+K +N +QG E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+A H+ +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 114 SAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 165
Query: 305 YGYAAPEYV 313
YAAPE +
Sbjct: 166 PNYAAPEVI 174
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVN 187
N+R + +G+G F V TG VAVK ++ L ++ EV
Sbjct: 16 NYRLQKTIGKGNFAKV---------KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR 66
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
+ L H N+VKL + LV E+ G + ++L RMK AK
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------RMKEKEARAK 119
Query: 248 ------GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
+ + H++ +++RD K N+LLD D N K++DFG + + G+K
Sbjct: 120 FRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---F 173
Query: 302 MGTYGYAAPE 311
G+ YAAPE
Sbjct: 174 CGSPPYAAPE 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLA 184
N++ LGEG FG V + TG VA+K +N +QG E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+A H+ +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 118 SAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 169
Query: 305 YGYAAPEYV 313
YAAPE +
Sbjct: 170 PNYAAPEVI 178
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
G + ++L R K + + H++ +++RD K N+LLDAD N K
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 146
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++DFG + + G+K G+ YAAPE
Sbjct: 147 IADFGFSNEFTFGNKLDT---FCGSPPYAAPE 175
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 39/185 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
R+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 289 GPEGD 293
E D
Sbjct: 200 VYEED 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N L V K+ L +G
Sbjct: 9 RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQNKFI-----MALKVLFKSQLEKEG 56
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ F+ E A ER VI+RD K N+L+ K++DFG +
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 289 GPEGDKTHVSTRVM-GTYGYAAPEYV 313
P + R M GT Y PE +
Sbjct: 164 APS-----LRRRXMCGTLDYLPPEMI 184
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 39/185 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
R+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 289 GPEGD 293
E D
Sbjct: 200 VYEED 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H++ +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 274 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
AD N K++DFG + + G+K G YAAPE
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+ + LH+ +++RD K NILLD D N KL+DFG + G+K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 186
Query: 305 YGYAAPEYVMTAL 317
Y APE + ++
Sbjct: 187 PSYLAPEIIECSM 199
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 39/185 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
R+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 289 GPEGD 293
E D
Sbjct: 200 VYEED 204
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGNMSPEAFL 228
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 229 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 286
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
A A G+A++ ++RD + +NIL+ + K++DFGL +
Sbjct: 287 -AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGR 329
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 60
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 119
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+ + LH+ +++RD K NILLD D N KL+DFG + G+K V GT
Sbjct: 120 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 173
Query: 305 YGYAAPEYVMTAL 317
Y APE + ++
Sbjct: 174 PSYLAPEIIECSM 186
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N L V K+ L +G
Sbjct: 9 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQNKFI-----MALKVLFKSQLEKEG 56
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ F+ E A ER VI+RD K N+L+ K++DFG +
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 289 GPEGDKTHVSTRVM-GTYGYAAPEYV 313
P + R M GT Y PE +
Sbjct: 164 APS-----LRRRXMCGTLDYLPPEMI 184
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAV+ ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H++ +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 274 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
AD N K++DFG + + G+K G+ YAAPE
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N L V K+ L +G
Sbjct: 10 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQNKFI-----MALKVLFKSQLEKEG 57
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 58 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 110
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ F+ E A ER VI+RD K N+L+ K++DFG +
Sbjct: 111 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 164
Query: 289 GPEGDKTHVSTRVM-GTYGYAAPEYV 313
P + R M GT Y PE +
Sbjct: 165 APS-----LRRRXMCGTLDYLPPEMI 185
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+ + LH+ +++RD K NILLD D N KL+DFG + G+K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGT 186
Query: 305 YGYAAPEYVMTAL 317
Y APE + ++
Sbjct: 187 PSYLAPEIIECSM 199
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAV+ ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H++ +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 274 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
AD N K++DFG + + G+K G+ YAAPE
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPE 182
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LG GGFG V + WI ++ TG VA+K + ++E W E+ + L H
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
N+V + +D LL E+ G L +L F L + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNA---KLSDFGLAKDGPEGDKTHVSTRVMGT 304
L +LHE +I+RD K NI+L K+ D G AK E D+ + T +GT
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGT 186
Query: 305 YGYAAPEYV 313
Y APE +
Sbjct: 187 LQYLAPELL 195
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LG GGFG V + WI ++ TG VA+K + ++E W E+ + L H
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
N+V + +D LL E+ G L +L F L + +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNA---KLSDFGLAKDGPEGDKTHVSTRVMGT 304
L +LHE +I+RD K NI+L K+ D G AK E D+ + T +GT
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGT 187
Query: 305 YGYAAPEYV 313
Y APE +
Sbjct: 188 LQYLAPELL 196
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + TG VAVK ++ Q + EV + D H N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V + + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIATVCLSVLRALS 155
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
+LH + VI+RD K+ +ILL +D KLSDFG ++K+ P+ ++GT
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK------RKXLVGTPY 206
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 207 WMAPEVI 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 110 LKVASRLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
L+ RL F K L +F S LG G G VFK KP +GL +
Sbjct: 3 LQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVM 53
Query: 167 AVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
A K ++ + + + E+ L + +V G D + + E M GSL +
Sbjct: 54 ARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQ 112
Query: 226 LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL 285
+ +++ +P I K+++ KGL +L E+ + +++RD K SNIL+++ KL DFG+
Sbjct: 113 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGV 170
Query: 286 AKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ + ++ +GT Y +PE
Sbjct: 171 SGQLIDS----MANSFVGTRSYMSPE 192
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 105 KLEE-ELKVASRLRKFTFNDLK-----LATRNFRPESLLGEGGFGCVFKGWIEENGTAPV 158
KLEE EL R R F K L +F S LG G G VFK
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSH 54
Query: 159 KPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFM 217
KP +GL +A K ++ + + + E+ L + +V G D + + E M
Sbjct: 55 KP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYN 277
GSL + + +++ +P I K+++ KGL +L E+ + +++RD K SNIL+++
Sbjct: 114 DGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGE 170
Query: 278 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
KL DFG++ + ++ +GT Y +PE
Sbjct: 171 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPE 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
++L +F S LG G G VFK KP +GL +A K ++ + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 164
Query: 303 GTYGYAAPE 311
GT Y +PE
Sbjct: 165 GTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
++L +F S LG G G VFK KP +GL +A K ++ + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 164
Query: 303 GTYGYAAPE 311
GT Y +PE
Sbjct: 165 GTRSYMSPE 173
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+KL +F +LG+G FG VF ++ T A+K L D + +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 61
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E + V H L + + V E++ G L H+ + S
Sbjct: 62 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 120
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
A GL FLH + ++YRD K NILLD D + K++DFG+ K+ GD
Sbjct: 121 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-- 175
Query: 298 STRVMGTYGYAAPEYVM 314
+ GT Y APE ++
Sbjct: 176 TNEFCGTPDYIAPEILL 192
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
++L +F S LG G G VFK KP +GL +A K ++ + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 164
Query: 303 GTYGYAAPE 311
GT Y +PE
Sbjct: 165 GTRSYMSPE 173
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 176
Query: 263 RDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD++ + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPE 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
++L +F S LG G G VFK KP +GL +A K ++ + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 164
Query: 303 GTYGYAAPE 311
GT Y +PE
Sbjct: 165 GTRSYMSPE 173
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 144
Query: 263 RDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD++ + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG G FG V+ G W NG VA+KTL G + +L E + L H
Sbjct: 17 LGNGQFGEVWMGTW---NGNT--------KVAIKTLK-PGTMSPESFLEEAQIMKKLKHD 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
LV+L + ++ +V E+M +GSL + L R+L LP + M A A G+A++
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM--AAQVAAGMAYI 121
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
I+RD +++NIL+ K++DFGLA+
Sbjct: 122 ERMN---YIHRDLRSANILVGNGLICKIADFGLAR 153
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 20/189 (10%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
F +LG+G FG VF +++ + + + V +K + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
VN H +VKL Y + + +L L+ +F+ G L L + + ++ +A
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A L LH +IYRD K NILLD + + KL+DFGL+K+ + +K S GT
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 305 YGYAAPEYV 313
Y APE V
Sbjct: 190 VEYMAPEVV 198
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 20/189 (10%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
F +LG+G FG VF +++ + + + V +K + + ++ L E
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
VN H +VKL Y + + +L L+ +F+ G L L + + ++ +A
Sbjct: 84 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
A L LH +IYRD K NILLD + + KL+DFGL+K+ + +K S GT
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 190
Query: 305 YGYAAPEYV 313
Y APE V
Sbjct: 191 VEYMAPEVV 199
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE- 181
D ++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEV 54
Query: 182 --WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVS 298
A L +LH +E+ V+YRD K N++LD D + K++DFGL K+G + T
Sbjct: 114 FYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 168
Query: 299 TRVMGTYGYAAPE 311
GT Y APE
Sbjct: 169 KXFCGTPEYLAPE 181
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
G + ++L R K + + H++ +++RD K N+LLDAD N K
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIK 153
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++DFG + + G+K G YAAPE
Sbjct: 154 IADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLV 193
LG G FG V G E TG VAVK LN ++ + E+ L
Sbjct: 24 LGVGTFGKVKVGKHE---------LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +++KL +V E++ G L +++ + L ++ G+ + H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCH 133
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
V++RD K N+LLDA NAK++DFGL+ +G+ S G+ YAAPE +
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVI 187
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 129
Query: 263 RDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD++ + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
++L +F S LG G G VFK KP +GL +A K ++ + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 164
Query: 303 GTYGYAAPE 311
GT Y +PE
Sbjct: 165 GTRSYMSPE 173
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWL 183
+L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 55
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E+ L + +V G D + + E M GSL + + +++ +P I K+++
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 114
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
KGL +L E+ + +++RD K SNIL+++ KL DFG++ G D+ ++ +G
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVG 168
Query: 304 TYGYAAPE 311
T Y +PE
Sbjct: 169 TRSYMSPE 176
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAEVNFLGD 191
+LG+G FG VF +++ + + + V +K + + ++ L EVN
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN---- 84
Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
H +VKL Y + + +L L+ +F+ G L L + + ++ +A A L
Sbjct: 85 --HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALD 140
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
LH +IYRD K NILLD + + KL+DFGL+K+ + +K S GT Y AP
Sbjct: 141 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAP 195
Query: 311 EYV 313
E V
Sbjct: 196 EVV 198
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VA+K ++ L ++ EV + L H N+VKL + L+ E+
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
G + ++L R K + + H+ + +++RD K N+LLDAD N K
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 151
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++DFG + + G K G+ YAAPE
Sbjct: 152 IADFGFSNEFTVGGKLDT---FCGSPPYAAPE 180
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
+G VAVK ++ Q + EV + D H N+V++ + ++ ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLS 281
L + + L + + LA+LH + VI+RD K+ +ILL D KLS
Sbjct: 129 LTD--IVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLS 183
Query: 282 DFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTAL 317
DFG ++KD P+ ++GT + APE + +L
Sbjct: 184 DFGFCAQISKDVPK------RKXLVGTPYWMAPEVISRSL 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 133
Query: 263 RDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD++ + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE- 181
D K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEV 54
Query: 182 --WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVS 298
A L +LH R V+YRD K N++LD D + K++DFGL K+G T
Sbjct: 114 FYGA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 167
Query: 299 TRVMGTYGYAAPE 311
GT Y APE
Sbjct: 168 KXFCGTPEYLAPE 180
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K D+ + + F +LG+G FG V + +++ G+ + VAVK L D +
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIA 65
Query: 178 GH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR------LLVYEFMPRGSLENHLFRR 229
+E+L E + + H ++ KL+G + + +++ FM G L L
Sbjct: 66 SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS 125
Query: 230 SL-----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG 284
+ LP ++ + A G+ +L + R I+RD N +L D ++DFG
Sbjct: 126 RIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 285 LAKDGPEGD 293
L++ GD
Sbjct: 183 LSRKIYSGD 191
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
E E+ +A + T N+ F LLG+G FG V ++E T G
Sbjct: 133 EMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFGKVI--LVKEKAT-------GRYY 176
Query: 167 AVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL 222
A+K L + + E L E L + H L L Y + RL V E+ G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 235
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSD 282
HL R + R A L +LH +E+ V+YRD K N++LD D + K++D
Sbjct: 236 FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITD 292
Query: 283 FGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
FGL K+G + T + GT Y APE
Sbjct: 293 FGLCKEGIKDGATMKT--FCGTPEYLAPE 319
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 109 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
E+ + ++ ++ ++ L+ F E LGE FG V+KG + G AP + VA+
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAI 61
Query: 169 KTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 226
KTL D +G +E+ E L H N+V L+G +D +++ + G L L
Sbjct: 62 KTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 227 FRRS-----------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
RS L P + + + A G+ +L + V+++D T N
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRN 175
Query: 270 ILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+L+ N K+SD GL ++ D + + + APE +M
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 159 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALS 261
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 262 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 312
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 313 WMAPELI 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
E E+ +A + T N+ F LLG+G FG V ++E T G
Sbjct: 136 EMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFGKVI--LVKEKAT-------GRYY 179
Query: 167 AVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL 222
A+K L + + E L E L + H L L Y + RL V E+ G L
Sbjct: 180 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 238
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSD 282
HL R + R A L +LH +E+ V+YRD K N++LD D + K++D
Sbjct: 239 FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITD 295
Query: 283 FGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
FGL K+G + T + GT Y APE
Sbjct: 296 FGLCKEGIKDGATMKT--FCGTPEYLAPE 322
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 54
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T +
Sbjct: 114 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 167
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 168 FCGTPEYLAPE 178
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T +
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 164
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T +
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-- 164
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK E T VA+K L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R V++RD K N+L++ + KL+DFGLA+
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 39 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 141
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 192
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 193 WMAPELI 199
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VA+K ++ L ++ EV + L H N+VKL + L+ E+
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
G + ++L R K + + H+ + +++RD K N+LLDAD N K
Sbjct: 99 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 154
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++DFG + + G K G YAAPE
Sbjct: 155 IADFGFSNEFTVGGKLDA---FCGAPPYAAPE 183
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
+G G FG VF G + + T VAVK+ K ++L E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V+LIG C + +V E + G L L +++ AA G+ +L +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
I+RD N L+ K+SDFG++++ +G
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+KL +F +LG+G FG VF ++ T A+K L D + +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 60
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E + V H L + + V E++ G L H+ + S
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 119
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
A GL FLH + ++YRD K NILLD D + K++DFG+ K+ GD
Sbjct: 120 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-- 174
Query: 298 STRVMGTYGYAAPEYVM 314
+ GT Y APE ++
Sbjct: 175 TNXFCGTPDYIAPEILL 191
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 37 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 139
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 190
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 191 WMAPELI 197
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
+G G FG VF G + + T VAVK+ K ++L E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V+LIG C + +V E + G L L +++ AA G+ +L +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
I+RD N L+ K+SDFG++++ +G
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 36/203 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+F+ L+G GGFG VFK +G T +K + ++ + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIKRVKYNNEKAERE----VKAL 58
Query: 190 GDLVHLNLVKLIG------YCIEDDQR----------LLVYEFMPRGSLENHL-FRRSLP 232
L H+N+V G Y E + + EF +G+LE + RR
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
L + +++ KG+ ++H + +I RD K SNI L K+ DFGL
Sbjct: 119 LDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 293 DKTHVSTRVMGTYGYAAPEYVMT 315
K R GT Y +PE + +
Sbjct: 176 GK---RXRSKGTLRYMSPEQISS 195
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 28 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 130
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 181
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 182 WMAPELI 188
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 115 RLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
RL F K L +F S LG G G VFK KP +GL +A K +
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLI 101
Query: 172 NHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
+ + + + E+ L + +V G D + + E M GSL + + +++
Sbjct: 102 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKA 160
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
+P I K+++ KGL +L E+ + +++RD K SNIL+++ KL DFG++
Sbjct: 161 GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218
Query: 291 EGDKTHVSTRVMGTYGYAAPE 311
+ ++ +GT Y +PE
Sbjct: 219 DS----MANSFVGTRSYMSPE 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 54
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH +E+ V+YRD K N++LD D + K++DFGL K+G + T
Sbjct: 114 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 168
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 169 FCGTPEYLAPE 179
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 55
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH +E+ V+YRD K N++LD D + K++DFGL K+G + T
Sbjct: 115 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 169
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 170 FCGTPEYLAPE 180
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 32 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 134
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 135 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 185
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 186 WMAPELI 192
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + T + GT Y PE +
Sbjct: 163 APSSRR----TTLCGTLDYLPPEMI 183
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 82 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 184
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 235
Query: 307 YAAPEYV 313
+ APE +
Sbjct: 236 WMAPELI 242
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR 300
A L +LH R V+YRD K N++LD D + K++DFGL K+G T
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKX 164
Query: 301 VMGTYGYAAPE 311
GT Y APE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LG G FG V +G + VA+K L + +E + E + L +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E
Sbjct: 71 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
+ ++RD N+LL + AK+SDFGL+K D ++ + R G + + APE +
Sbjct: 129 --KNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 130
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 310
LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y AP
Sbjct: 131 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 184
Query: 311 E 311
E
Sbjct: 185 E 185
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
R++T D + RP LG+G FG V+ ++ K L V KT L G
Sbjct: 7 RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 55 VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
I A L++ H + VI+RD K N+LL ++ K++DFG + P +
Sbjct: 113 RTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR- 167
Query: 296 HVSTRVMGTYGYAAPEYV 313
T + GT Y PE +
Sbjct: 168 ---TTLCGTLDYLPPEMI 182
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 29/204 (14%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 4 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 49
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 50 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 107
Query: 243 LGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTH 296
L A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
Query: 297 VS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINM 191
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 29/204 (14%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 6 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 51
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 52 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 109
Query: 243 LGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTH 296
L A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
Query: 297 VS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINM 193
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 29/204 (14%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 3 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 48
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 49 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 106
Query: 243 LGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTH 296
L A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166
Query: 297 VS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINM 190
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 29/204 (14%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 29 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 74
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 75 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 132
Query: 243 LGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTH 296
L A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
Query: 297 VS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINM 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
R + +G+G FG V++G W G VAVK + + + W E
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKW------------RGEEVAVKIFSS---REERSWFREAE 86
Query: 188 FLGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KL 144
Query: 242 ALGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKT 295
AL A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 296 HVS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINM 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 29/204 (14%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 9 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 54
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 55 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 112
Query: 243 LGAAKGLAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTH 296
L A GLA LH E +P I +RD K+ NIL+ + ++D GLA + D
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172
Query: 297 VS-TRVMGTYGYAAPEYVMTALEL 319
++ +GT Y APE + ++ +
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINM 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 13 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 125
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 180
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 154
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 310
LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y AP
Sbjct: 155 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 208
Query: 311 E 311
E
Sbjct: 209 E 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 25 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 137
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 192
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 147
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPE 311
++RD N+LL + AK+SDFGL+K D+ + + G + + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPE 200
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 147
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPE 311
++RD N+LL + AK+SDFGL+K D+ + + G + + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPE 200
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVV 188
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 15 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 127
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 182
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 22/181 (12%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 101
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 156
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 310
LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y AP
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 210
Query: 311 E 311
E
Sbjct: 211 E 211
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK E T VA+K L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
R V++RD K N+L++ + KL++FGLA+
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 33 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 87
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 145
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 200
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV-- 186
+ + P+ ++G G V + V TG AVK + + E L EV
Sbjct: 94 QKYDPKDVIGRGVSSVVRRC---------VHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 187 ------NFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
+ L + H +++ LI LV++ M +G L ++L + + L
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETR 203
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
I + ++FLH +++RD K NILLD + +LSDFG + G+K
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR--- 257
Query: 300 RVMGTYGYAAPEYVMTALE 318
+ GT GY APE + +++
Sbjct: 258 ELCGTPGYLAPEILKCSMD 276
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 377 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 431
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 489
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 544
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 138 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVV 189
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 31/201 (15%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-- 193
+G+G +G V++G W G +VAVK + + + W E ++
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWFRETEIYNTVLLR 60
Query: 194 HLNLVKLIGYCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
H N++ I + Q L+ + GSL + L R++L ++R+ A+ AA GL
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGL 118
Query: 250 AFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLAKDGPEG-DKTHVSTRV-M 302
A LH E +P I +RDFK+ N+L+ ++ ++D GLA +G D + +
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 303 GTYGYAAPEYVMTALELFCLK 323
GT Y APE + + C +
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFE 199
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVV 188
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA- 184
+AT + P + +G G +G V+K P +G VA+K++ G L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGGGGGGGLPI 56
Query: 185 ----EVNFLGDLV---HLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP 232
EV L L H N+V+L+ C D+ + LV+E + + L +L + P
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 233 -LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE 291
LP + +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--- 169
Query: 292 GDKTHVSTRVMGTYGYAAPEYVM-----TALELFCLKC 324
T V+ T Y APE ++ T ++++ + C
Sbjct: 170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVV 188
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
TG VA+K ++ + L + E+ L +L H ++ +L ++ +V E+ P G
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 221 SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKL 280
L +++ + R+ + +A++H + +RD K N+L D + KL
Sbjct: 94 ELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKL 149
Query: 281 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
DFGL P+G+K + G+ YAAPE +
Sbjct: 150 IDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELI 181
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 378 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 432
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 490
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + + G + + APE +
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 545
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
TG VAVK LN ++ + E+ L H +++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA 278
G L +++ + R ++ + + H V++RD K N+LLDA NA
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA 150
Query: 279 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
K++DFGL+ +G+ S G+ YAAPE +
Sbjct: 151 KIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI 182
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 49/217 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+F+ L+G GGFG VFK +G T ++ + ++ + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIRRVKYNNEKAERE----VKAL 59
Query: 190 GDLVHLNLVKLIG--------------------YCIEDDQR---------LLVYEFMPRG 220
L H+N+V G Y E+ + + EF +G
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 221 SLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
+LE + RR L + +++ KG+ ++H + +I+RD K SNI L K
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVK 176
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTA 316
+ DFGL K TR GT Y +PE + +
Sbjct: 177 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQ 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDLV---HLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK 294
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSY 164
Query: 295 THVSTRVMGTYGYAAPEYVM-----TALELFCLKC 324
V+ T Y APE ++ T ++++ + C
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----EWLAEVNFLGD 191
+GEG +G VFK +NG G VA+K + G +G +A + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 192 LVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGA 245
H N+V+L C + + LV+E + + L +L + P +P +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+GL FLH V++RD K NIL+ + KL+DFGLA+ T V+ T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTL 183
Query: 306 GYAAPEYVM-----TALELFCLKC 324
Y APE ++ T ++L+ + C
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGC 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----EWLAEVNFLGD 191
+GEG +G VFK +NG G VA+K + G +G +A + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 192 LVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGA 245
H N+V+L C + + LV+E + + L +L + P +P +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+GL FLH V++RD K NIL+ + KL+DFGLA+ T V+ T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTL 183
Query: 306 GYAAPEYVM-----TALELFCLKC 324
Y APE ++ T ++L+ + C
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGC 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-- 178
++ L+ F E LGE FG V+KG + G AP + VA+KTL D +G
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPL 55
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-------- 230
+E+ E L H N+V L+G +D +++ + G L L RS
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 231 ---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLS 281
L P + + + A G+ +L + V+++D T N+L+ N K+S
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRNVLVYDKLNVKIS 170
Query: 282 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
D GL ++ D + + + APE +M
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + + GT Y PE +
Sbjct: 163 APSSRR----XXLXGTLDYLPPEMI 183
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 31/214 (14%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
+A + L H N+V+L C + + LV+E + + L +L + P +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+ +GL FLH V++RD K NIL+ + KL+DFGLA+
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 296 HVSTRVMGTYGYAAPEYVM-----TALELFCLKC 324
T V+ T Y APE ++ T ++L+ + C
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 112 VASRLRKFTFNDL---KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
+ S RK N+L KL NF +LG+G FG V + GT A+
Sbjct: 1 MPSEDRKQPSNNLDRVKLTDFNFL--MVLGKGSFGKVMLA---------DRKGTEELYAI 49
Query: 169 KTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLEN 224
K L D + + + E L L + + C + RL V E++ G L
Sbjct: 50 KILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 109
Query: 225 HL-----FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
H+ F+ + ++ + I GL FLH+ R +IYRD K N++LD++ + K
Sbjct: 110 HIQQVGKFKEPQAVFYAAEISI------GLFFLHK---RGIIYRDLKLDNVMLDSEGHIK 160
Query: 280 LSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYV 313
++DFG+ K E V+TR GT Y APE +
Sbjct: 161 IADFGMCK---EHMMDGVTTREFCGTPDYIAPEII 192
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
+L +F S LG G G V K +G + L + N + +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--------QIIR 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+ L + +V G D + + E M GSL + + + + +P I K+++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIA 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 304
+GLA+L E+ + +++RD K SNIL+++ KL DFG++ + ++ +GT
Sbjct: 123 VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGT 176
Query: 305 YGYAAPE 311
Y APE
Sbjct: 177 RSYMAPE 183
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 100 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 156
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 157 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDLV---HLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK 294
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSY 164
Query: 295 THVSTRVMGTYGYAAPEYVM-----TALELFCLKC 324
V+ T Y APE ++ T ++++ + C
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ A KL DFGL++
Sbjct: 509 SKR-FVHRDIAARNVLVSATDCVKLGDFGLSR 539
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 77 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 133
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 134 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 136
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 307
LH VI+RD K N+ L+ D K+ DFGLA DG E KT + GT Y
Sbjct: 137 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 187
Query: 308 AAPE 311
APE
Sbjct: 188 IAPE 191
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 509 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 75 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 131
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 132 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 74 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 130
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 131 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 107 EEELKVASRLR--KFTFNDLKLATRNFRPESLLGEGGFGCVF---KGWIEENGTA-PVKP 160
E+ L V LR T + K+ NF +LG G +G VF K + G +K
Sbjct: 30 EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPR 219
T+ K + + ++ L + LV L+ Y + + +L L+ +++
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH------YAFQTETKLHLILDYING 143
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK 279
G L HL +R +++ + L LH+ +IYRD K NILLD++ +
Sbjct: 144 GELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVV 199
Query: 280 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
L+DFGL+K+ D+T + GT Y AP+ V
Sbjct: 200 LTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIV 232
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 69 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 125
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 126 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 307
LH VI+RD K N+ L+ D K+ DFGLA DG E KT + GT Y
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 183
Query: 308 AAPE 311
APE
Sbjct: 184 IAPE 187
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ ++ + +
Sbjct: 5 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 53
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 54 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 113
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDF 283
L + S I A L++ H + VI+RD K N+LL + K++DF
Sbjct: 114 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADF 169
Query: 284 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
G + P + T + GT Y PE +
Sbjct: 170 GWSVHAPSSRR----TTLCGTLDYLPPEMI 195
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG G FG V K EE T GL +A K + G++ +E E++ + L H
Sbjct: 96 ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
NL++L + +LV E++ G L + + S L + +G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 256 AERPVIYRDFKTSNILL---DADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
+ +++ D K NIL DA K+ DFGLA+ +K V+ GT + APE
Sbjct: 205 -QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEV 259
Query: 313 V 313
V
Sbjct: 260 V 260
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ A KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
F+ E + G+G FG V G + TG++VA+K + D ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLGK---------EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 191 DLVHLNLVKLIGYCI---EDDQRLL----VYEFMP---RGSLENHLFRRSLPLPWSIRMK 240
L H N+V+L Y E D+R + V E++P N+ R+ P P I++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILL-DADYNAKLSDFGLAK--DGPEGDKTHV 297
+ + LH + V +RD K N+L+ +AD KL DFG AK E + ++
Sbjct: 134 FLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 298 STRVMGTYGYAAPEYVM------TALELFCLKC 324
+R Y APE + TA++++ + C
Sbjct: 193 CSRY-----YRAPELIFGNQHYTTAVDIWSVGC 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 307
LH VI+RD K N+ L+ D K+ DFGLA DG E KT + GT Y
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 183
Query: 308 AAPE 311
APE
Sbjct: 184 IAPE 187
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++RD N+LL + AK+SDFGL+K D+ + G + + APE +
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECI 186
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + T + GT Y PE +
Sbjct: 161 APSSRR----TTLCGTLDYLPPEMI 181
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 167 AVKTLNHDGLQGHKE---WLAEVN-FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL 222
AVK L + KE ++E N L ++ H LV L D+ V +++ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSD 282
HL R L R A A L +LH ++YRD K NILLD+ + L+D
Sbjct: 127 FYHLQRERCFLEPRARF-YAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTD 182
Query: 283 FGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
FGL K+ E + T ++ GT Y APE
Sbjct: 183 FGLCKENIEHNST--TSTFCGTPEYLAPE 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ ++ + +
Sbjct: 14 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDF 283
L + S I A L++ H + VI+RD K N+LL + K++DF
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADF 178
Query: 284 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
G + P + T + GT Y PE +
Sbjct: 179 GWSVHAPSSRR----TTLCGTLDYLPPEMI 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDLV---HLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + T + GT Y PE +
Sbjct: 163 APSSRR----TTLCGTLDYLPPEMI 183
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 161 SSRRTDLC----GTLDYLPPEMI 179
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LG G FG V +G + VA+K L + +E + E + L +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E+
Sbjct: 397 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 313
++R+ N+LL + AK+SDFGL+K D ++ + R G + + APE +
Sbjct: 456 N---FVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 511
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 4 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 47
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 108 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR 163
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+T +S GT Y PE +
Sbjct: 164 RTTLS----GTLDYLPPEMI 179
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLV 193
LG+G +G V+K + TG VAVK + D Q + E+ L +L
Sbjct: 17 LGKGAYGIVWKS---------IDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 194 -HLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
H N+V L+ D+ R LV+++M + H R+ L + + K +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+LH +++RD K SNILL+A+ + K++DFGL++
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 165 SSRRTDLC----GTLDYLPPEMI 183
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+ T + GT Y PE +
Sbjct: 165 SSRR----TTLCGTLDYLPPEXI 183
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 136 LLGEGGFGCVFKGWIEENGTA--PVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL 192
+LG G FG V N TA K G + VAVK L +E L +E+ + L
Sbjct: 52 VLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 193 -VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP------------------- 232
H N+V L+G C L++E+ G L N+L +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 233 ---LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
L + + A AKG+ FL + ++RD N+L+ K+ DFGLA+D
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + T + GT Y PE +
Sbjct: 161 APSSRR----TTLCGTLDYLPPEMI 181
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 31/190 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH- 194
L+G G +G V+KG VK TG A+K ++ G + +E E+N L H
Sbjct: 31 LVGNGTYGQVYKG-------RHVK--TGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHH 80
Query: 195 LNLVKLIGYCIE------DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGA 245
N+ G I+ DDQ LV EF GS+ + + +L W I
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREI 138
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR--VMG 303
+GL+ LH+ VI+RD K N+LL + KL DFG++ + D+T V R +G
Sbjct: 139 LRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA---QLDRT-VGRRNTFIG 191
Query: 304 TYGYAAPEYV 313
T + APE +
Sbjct: 192 TPYWMAPEVI 201
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
TG VAVK LN ++ + E+ L H +++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA 278
G L +++ + R ++ + + H V++RD K N+LLDA NA
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA 150
Query: 279 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
K++DFGL+ +G+ S G+ YAAPE +
Sbjct: 151 KIADFGLSNMMSDGEFLRDSC---GSPNYAAPEVI 182
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGD 191
+ ++G+G FG V+ G +I++ + A+K+L+ +Q + +L E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNR-------IQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 192 LVHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKG 248
L H N++ LIG + + ++ +M G L F RS +++ I+ G A+G
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ--FIRSPQRNPTVKDLISFGLQVARG 136
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ +L AE+ ++RD N +LD + K++DFGLA+D
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
++R ++RD N+L+ ++ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
VI+R+ K+ NILL D + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 138 ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVV 189
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
R++T D + RP LG+G FG V+ ++ K L V KT L G
Sbjct: 7 RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 55 VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
I A L++ H + VI+RD K N+LL ++ K++DFG + P +
Sbjct: 113 RTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR- 167
Query: 296 HVSTRVMGTYGYAAPEYV 313
+ GT Y PE +
Sbjct: 168 ---DTLCGTLDYLPPEMI 182
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN-----LVKLIGYCIEDDQRLLVYEF 216
TG +AVK + G+KE + D+V + +V+ G I + + E
Sbjct: 49 TGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105
Query: 217 MPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD 275
M G+ L +R P+P I K+ + K L +L E+ VI+RD K SNILLD
Sbjct: 106 M--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDER 161
Query: 276 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
KL DFG++ G D R G Y APE +
Sbjct: 162 GQIKLCDFGIS--GRLVD-DKAKDRSAGCAAYMAPERI 196
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 163 RTELC----GTLDYLPPEMI 178
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 203 YC-IEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEA 256
+C +DD+ L +V E+MP G L N + +P W + + +AL A + +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--- 197
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD + KL+DFG E H T V GT Y +PE
Sbjct: 198 ------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPE 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 129 RNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKE 181
++ PE L +G+G FG VFKG +N T V VA+K ++ + ++
Sbjct: 21 QSMDPEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIED 71
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
E+ L + K G ++D + ++ E++ GS + L PL + I
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
KGL +LH E + I+RD K +N+LL KL+DFG+A G D
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 184
Query: 302 MGTYGYAAPEYV 313
+GT + APE +
Sbjct: 185 VGTPFWMAPEVI 196
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLA 250
L H N+VK G+ E + + L E+ G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
+LH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y AP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 311 E 311
E
Sbjct: 176 E 176
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVI 176
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 176
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 163 RTDLC----GTLDYLPPEMI 178
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 163 RTDLC----GTLDYLPPEMI 178
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ T + GT Y PE +
Sbjct: 163 R----TTLCGTLDYLPPEMI 178
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 138
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 191
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+T + GT Y PE +
Sbjct: 163 RTXLC----GTLDYLPPEMI 178
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD + KL+DFG + T V GT Y +PE
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 244
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK + TG VA+K + D K L E+ L L H
Sbjct: 11 IGEGSYGVVFKCRNRD---------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
NLV L+ + LV+E+ L + L R +P + I + + F H+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
I+RD K NIL+ KL DFG A+
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFAR 150
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 191
Query: 258 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD + KL+DFG + T V GT Y +PE
Sbjct: 192 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
RD K N+LLD + KL+DFG + T V GT Y +PE
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 244
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 2 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 45
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 105
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 106 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ T + GT Y PE +
Sbjct: 162 R----TTLCGTLDYLPPEMI 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 7 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 50
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 110
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 111 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 166
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ T + GT Y PE +
Sbjct: 167 R----TTLCGTLDYLPPEMI 182
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K+++FG + P
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAP 161
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+ T + GT Y PE +
Sbjct: 162 SSRR----TTLCGTLDYLPPEMI 180
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K+++FG +
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVH 160
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + T + GT Y PE +
Sbjct: 161 APSSRR----TTLCGTLDYLPPEMI 181
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G+G +G V++G W EN VAVK + + K W E L + V L
Sbjct: 45 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETE-LYNTVML 88
Query: 196 NLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
++G+ D Q L+ + GSL ++L +L +R I L A G
Sbjct: 89 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASG 146
Query: 249 LAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRV- 301
LA LH E +P I +RD K+ NIL+ + ++D GLA ++ V
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 302 MGTYGYAAPEYVMTALELFCL 322
+GT Y APE + +++ C
Sbjct: 207 VGTKRYMAPEVLDETIQVDCF 227
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 161
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 162 SSRRXXLC----GTLDYLPPEMI 180
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 11 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 61
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
+ H N+V + D+ LV + + GS+ + H+ +S L S I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA---KDGPEGDKTHVS 298
+GL +LH+ + I+RD K NILL D + +++DFG++ G + + V
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 299 TRVMGTYGYAAPEYV 313
+GT + APE +
Sbjct: 179 KTFVGTPCWMAPEVM 193
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 16 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
+ H N+V + D+ LV + + GS+ + H+ +S L S I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA---KDGPEGDKTHVS 298
+GL +LH+ + I+RD K NILL D + +++DFG++ G + + V
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 299 TRVMGTYGYAAPEYV 313
+GT + APE +
Sbjct: 184 KTFVGTPCWMAPEVM 198
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 28/198 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
H+ R V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 117 HD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDV 171
Query: 313 VM------TALELFCLKC 324
+M T ++++ + C
Sbjct: 172 LMGSKKYSTTIDIWSVGC 189
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
+ ++RD N L++ K+SDFGL++
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 28/198 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
H+ R V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 117 HD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 313 VM------TALELFCLKC 324
+M T ++++ + C
Sbjct: 172 LMGSKKYSTTIDIWSVGC 189
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ ++ + +
Sbjct: 14 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDF 283
L + S I A L++ H + VI+RD K N+LL + K++DF
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADF 178
Query: 284 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
G + P + + GT Y PE +
Sbjct: 179 GWSVHAPSSRRDDLC----GTLDYLPPEMI 204
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 28/198 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
H+ R V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 117 HD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 313 VM------TALELFCLKC 324
+M T ++++ + C
Sbjct: 172 LMGSKKYSTTIDIWSVGC 189
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
S I A L++ H + VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P + + GT Y PE +
Sbjct: 161 APSSRRXXLC----GTLDYLPPEMI 181
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G+G +G V++G W EN VAVK + + K W E L + V L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETE-LYNTVML 59
Query: 196 NLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
++G+ D Q L+ + GSL ++L +L +R I L A G
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASG 117
Query: 249 LAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRV- 301
LA LH E +P I +RD K+ NIL+ + ++D GLA ++ V
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 302 MGTYGYAAPEYVMTALELFCL 322
+GT Y APE + +++ C
Sbjct: 178 VGTKRYMAPEVLDETIQVDCF 198
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G+G +G V++G W EN VAVK + + K W E L + V L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETE-LYNTVML 59
Query: 196 NLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
++G+ D Q L+ + GSL ++L +L +R I L A G
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASG 117
Query: 249 LAFLHEE----AERPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRV- 301
LA LH E +P I +RD K+ NIL+ + ++D GLA ++ V
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 302 MGTYGYAAPEYVMTALELFCL 322
+GT Y APE + +++ C
Sbjct: 178 VGTKRYMAPEVLDETIQVDCF 198
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP 290
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
Query: 291 EGDKTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 161 SSRR----DTLCGTLDYLPPEMI 179
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ E+N + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAR-EKN--------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 163 RAALC----GTLDYLPPEMI 178
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---------DGP 290
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ P
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTA 316
G ++ + T + T Y APE ++T+
Sbjct: 173 TGQQSGM-TEXVATRWYRAPEVMLTS 197
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---------DGP 290
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ P
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTA 316
G ++ + T + T Y APE ++T+
Sbjct: 173 TGQQSGM-TEYVATRWYRAPEVMLTS 197
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG V+KG +N T V VA+K ++ + ++ E+ L
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ + G ++ + ++ E++ GS + L + PL + I KGL +LH E
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE 135
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 188
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLV 193
LG+G FG V+ ++ +A+K L L+ + EV L
Sbjct: 13 LGKGKFGNVYLAREKQRK---------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N+++L GY + + L+ E+ P G++ L + S I A L++ H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 122
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ VI+RD K N+LL + K++DFG + P + T + GT Y PE +
Sbjct: 123 SKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 175
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+P I KI L K L L E + +I+RD K SNILLD N KL DFG++ G
Sbjct: 122 IPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLV 177
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
D TR G Y APE +
Sbjct: 178 DSI-AKTRDAGCRPYMAPERI 197
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 235
++EVN L +L H N+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+R+ L A + V++RD K +N+ LD N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDT 170
Query: 296 HVSTRVMGTYGYAAPE 311
+ +GT Y +PE
Sbjct: 171 SFAKTFVGTPYYMSPE 186
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-------FRRSLPLPWSIRMKIALGAA 246
H N++ I D R E M L HL ++ L
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 212 WYRAPEIMLNS 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 235
++EVN L +L H N+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+R+ L A + V++RD K +N+ LD N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDT 170
Query: 296 HVSTRVMGTYGYAAPE 311
+ +GT Y +PE
Sbjct: 171 SFAKAFVGTPYYMSPE 186
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 186 EYVATRWYRAPEIMLNS 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYG 306
+LH VI+RD K N+ L+ D + K+ DFGLA DG E KT + GT
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKT-----LCGTPN 207
Query: 307 YAAPE 311
Y APE
Sbjct: 208 YIAPE 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 186 EYVATRWYRAPEIMLNS 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+L++ + K+ DFGLA+ PE D T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 212 WYRAPEIMLNS 222
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 6 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 110 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 166 RAALC----GTLDYLPPEMI 181
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
LGEG + V+KG T VA+K + + +G + EV+ L DL H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V L + LV+E++ + L+ +L + +GLA+ H +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
V++RD K N+L++ KL+DFGLA+ KT+ + V T Y P+ ++
Sbjct: 120 K---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILL 173
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 186 EYVATRWYRAPEIMLNS 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++ + ++ E++ GS + L R+ P + KGL +LH E
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLHSE 139
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 315
+ I+RD K +N+LL + KL+DFG+A G D +GT + APE +
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 316 A 316
+
Sbjct: 195 S 195
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 186 EYVATRWYRAPEIMLNS 202
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 134
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 135 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 190 EYVATRWYRAPEIMLNS 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
+F P LG GGFG VF+ + + A+K + + +E + EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPNRELAREKVMREVKA 56
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL--ENHLFRRSLPLPW----------- 235
L L H +V+ +E + + P+ L + L R+ W
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 236 -SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL--AKDGPEG 292
S+ + I L A+ + FLH + +++RD K SNI D K+ DFGL A D E
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 293 DKTHVS--------TRVMGTYGYAAPEYV 313
++T ++ T +GT Y +PE +
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R FT +D ++ RP LG+G FG V+ + + VA+K L +
Sbjct: 18 RHFTIDDFEIG----RP---LGKGKFGNVYLAR---------EKKSHFIVALKVLFKSQI 61
Query: 177 QGH---KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + E+ L H N+++L Y + + L+ E+ PRG L L ++S
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTF 120
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L + H + VI+RD K N+LL K++DFG + P
Sbjct: 121 DEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR 177
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 178 R----KTMCGTLDYLPPEMI 193
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 163 RXXLC----GTLDYLPPEMI 178
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
N+ + L+G G +G V+ + T VA+K +N + L K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 188 FLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
L L +++L I DD + +V E S LF+ + L I
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA--DSDLKKLFKTPIFLTEEHIKTIL 135
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
G F+HE +I+RD K +N LL+ D + K+ DFGLA+
Sbjct: 136 YNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 150
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 151 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 206 EYVATRWYRAPEIMLNS 222
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 196 WYRAPEIMLNS 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 109 ELKVASRLRKFTFN----DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
E K A+ + KF N +KL NF +LG+G FG V + E + GT
Sbjct: 319 EEKTANTISKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---LSE------RKGTDE 367
Query: 165 TVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRG 220
AVK L D + + + E L + + C + RL V E++ G
Sbjct: 368 LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGG 427
Query: 221 SLENHL-----FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAD 275
L H+ F+ + ++ + I GL FL + +IYRD K N++LD++
Sbjct: 428 DLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQSKG---IIYRDLKLDNVMLDSE 478
Query: 276 YNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYV 313
+ K++DFG+ K E V+T+ GT Y APE +
Sbjct: 479 GHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEII 514
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 107 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 163 RAALC----GTLDYLPPEMI 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 188 EYVATRWYRAPEIMLNS 204
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
N+ + L+G G +G V+ + ++N VA+K +N + L K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY-DKNANK--------NVAIKKVNRMFEDLIDCKRILREIT 79
Query: 188 FLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
L L +++L I +D L + + L+ LF+ + L I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
G F+HE +I+RD K +N LL+ D + K+ DFGLA+ H+
Sbjct: 139 NLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 188 EYVATRWYRAPEIMLNS 204
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 136 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 191 EYVATRWYRAPEIMLNS 207
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 35 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 137 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 192 EYVATRWYRAPEIMLNS 208
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 26 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 127
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 128 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 183 EYVATRWYRAPEIMLNS 199
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 134
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 135 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 190 EYVATRWYRAPEIMLNS 206
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 188 EYVATRWYRAPEIMLNS 204
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 196 WYRAPEIMLNS 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 29 MLGKGSFGEVLKCK---------DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N++KL + +V E G L + + +R +I G+ ++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH 138
Query: 254 EEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
+ +++RD K NILL++ D + K+ DFGL+ + T + R+ GT Y AP
Sbjct: 139 K---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAP 192
Query: 311 E 311
E
Sbjct: 193 E 193
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 196 WYRAPEIMLNS 206
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 190 WYRAPEIMLNS 200
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 190 WYRAPEIMLNS 200
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 37 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 138
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 139 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 194 EYVATRWYRAPEIMLNS 210
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK---------DGP 290
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ P
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTA 316
G ++ + + T Y APE ++T+
Sbjct: 173 TGQQSGM-VEFVATRWYRAPEVMLTS 197
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVST 299
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 300 RVMGTYGYAAPEYVMTA 316
+ T Y APE ++ +
Sbjct: 186 EYVATRWYRAPEIMLNS 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 188 ---YRAPELIFGATD 199
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 6 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD 293
I A L++ H + VI+RD K N+LL + K++DFG + P
Sbjct: 110 EQRTATYIT-ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 294 KTHVSTRVMGTYGYAAPEYV 313
+ + GT Y PE +
Sbjct: 166 RDDLC----GTLDYLPPEMI 181
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
F ++L R +L EGGF V++ G+G A+K L + +
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQ---------DVGSGREYALKRLLSNEEEK 68
Query: 179 HKEWLAEVNFLGDLV-HLNLVKL-----IGYCIED--DQRLLVYEFMPRGSLENHLFRRS 230
++ + EV F+ L H N+V+ IG D L+ + +G L L +
Sbjct: 69 NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME 128
Query: 231 L--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA 286
PL +KI + + +H + + P+I+RD K N+LL KL DFG A
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 188 ---YRAPELIFGATD 199
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 137 LGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
LG G +G C K E +K N + + H+E E++ L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++KL + LV EF G L + R I G+ +L
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL 162
Query: 253 HEEAERPVIYRDFKTSNILLDAD---YNAKLSDFGL----AKDGPEGDKTHVSTRVMGTY 305
H + +++RD K NILL+ N K+ DFGL +KD D+ +GT
Sbjct: 163 H---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR-------LGTA 212
Query: 306 GYAAPE 311
Y APE
Sbjct: 213 YYIAPE 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 309
+LH VI+RD K N+ L+ D + K+ DFGLA K +G++ + GT Y A
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIA 210
Query: 310 PE 311
PE
Sbjct: 211 PE 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 140
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 309
+LH VI+RD K N+ L+ D + K+ DFGLA K +G++ + GT Y A
Sbjct: 141 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 194
Query: 310 PE 311
PE
Sbjct: 195 PE 196
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 29 MLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N++KL + +V E G L + + +R +I G+ ++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH 138
Query: 254 EEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
+ +++RD K NILL++ D + K+ DFGL+ + T + R+ GT Y AP
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAP 192
Query: 311 E 311
E
Sbjct: 193 E 193
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 29 MLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N++KL + +V E G L + + +R +I G+ ++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH 138
Query: 254 EEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
+ +++RD K NILL++ D + K+ DFGL+ + T + R+ GT Y AP
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAP 192
Query: 311 E 311
E
Sbjct: 193 E 193
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 309
+LH VI+RD K N+ L+ D + K+ DFGLA K +G++ + GT Y A
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 210
Query: 310 PE 311
PE
Sbjct: 211 PE 212
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
F + + + ++ + +LG+G FG V K I TG AVK ++ +
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQV 87
Query: 177 Q---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + L EV L L H N++KL + + LV E G L + + R
Sbjct: 88 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RF 146
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGP 290
+I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 147 SEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTALELFC 321
K +GT Y APE + + C
Sbjct: 204 ASKKMKDK---IGTAYYIAPEVLHGTYDEKC 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 38 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 88
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL +C +DD++L + G L ++ R+ +
Sbjct: 89 DVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 146
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 306 GYAAPE 311
Y +PE
Sbjct: 204 QYVSPE 209
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
F + + + ++ + +LG+G FG V K I TG AVK ++ +
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQV 88
Query: 177 Q---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + L EV L L H N++KL + + LV E G L + + R
Sbjct: 89 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RF 147
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGP 290
+I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 148 SEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTALELFC 321
K +GT Y APE + + C
Sbjct: 205 ASKKMKDK---IGTAYYIAPEVLHGTYDEKC 232
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 235
++EVN L +L H N+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT 295
+R+ L A + V++RD K +N+ LD N KL DFGLA+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED- 171
Query: 296 HVSTRVMGTYGYAAPE 311
+ +GT Y +PE
Sbjct: 172 -FAKEFVGTPYYMSPE 186
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
F + + + ++ + +LG+G FG V K I TG AVK ++ +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQV 64
Query: 177 QGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + L EV L L H N++KL + + LV E G L + + R
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RF 123
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGP 290
+I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 124 SEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTALELFC 321
K +GT Y APE + + C
Sbjct: 181 ASKKMKDK---IGTAYYIAPEVLHGTYDEKC 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
F + + + ++ + +LG+G FG V K I TG AVK ++ +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQV 70
Query: 177 QGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + L EV L L H N++KL + + LV E G L + + R
Sbjct: 71 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RF 129
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGP 290
+I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 130 SEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Query: 291 EGDKTHVSTRVMGTYGYAAPE 311
K +GT Y APE
Sbjct: 187 ASKKMKDK---IGTAYYIAPE 204
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 187 YYRAPELIFGATD 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
E+ L L H N+VKL+ + +D +V+E + +G + + PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYF 143
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVM 302
KG+ +LH + +I+RD K SN+L+ D + K++DFG++ + D +T +
Sbjct: 144 QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--V 198
Query: 303 GTYGYAAPEYVMTALELF 320
GT + APE + ++F
Sbjct: 199 GTPAFMAPESLSETRKIF 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 222 ---YRAPELIFGATD 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 170
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 226 ---YRAPELIFGATD 237
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 168
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 224 ---YRAPELIFGATD 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 160
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 216 ---YRAPELIFGATD 227
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 211
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 267 ---YRAPELIFGATD 278
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 220
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 221 YYRAPELIFGATD 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 188 ---YRAPELIFGATD 199
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 40 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 145
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 201 ---YRAPELIFGATD 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDK--THVSTRVMG 303
+ LA++H + +RD K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 304 TYGYAAPEYVMTALE 318
Y APE + A +
Sbjct: 193 ---YRAPELIFGATD 204
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 194
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 195 YYRAPELIFGATD 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 187 YYRAPELIFGATD 199
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 151
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 205
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 206 YYRAPELIFGATD 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 199 YYRAPELIFGATD 211
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 199 YYRAPELIFGATD 211
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
+GEG FG E+G V +K +N + +E EV L ++ H
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYV---------IKEINISRMSSKEREESRREVAVLANMKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWSIRMKIALGAAK 247
N+V+ E+ +V ++ G L + LF+ L W +++ +AL
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL---- 138
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
+H+ R +++RD K+ NI L D +L DFG+A+ ++ +GT Y
Sbjct: 139 --KHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYY 191
Query: 308 AAPE 311
+PE
Sbjct: 192 LSPE 195
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 187 YYRAPELIFGATD 199
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 187 YYRAPELIFGATD 199
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 133
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 187
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 188 YYRAPELIFGATD 200
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 30/193 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 31 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 136
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 190
Query: 306 GYAAPEYVMTALE 318
Y APE + A +
Sbjct: 191 YYRAPELIFGATD 203
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 196 WYRAPEIMLNS 206
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTY 305
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 306 GYAAPEYVMTA 316
Y APE ++ +
Sbjct: 197 WYRAPEIMLNS 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLV 193
LGEG FG V T VA+K ++ L+ H E+++L L
Sbjct: 17 LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +++KL ++V E+ G L +++ + R + + + H
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH 125
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+++RD K N+LLD + N K++DFGL+ +G+ S G+ YAAPE +
Sbjct: 126 RHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 179
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQRL--------LVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD---GPEGDKTHV 297
+ GL ++H +++RD K +N+L+ D KL+DFGLA+
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 298 STRVMGTYGYAAPEYVM 314
RV+ T Y PE ++
Sbjct: 187 XNRVV-TLWYRPPELLL 202
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 44/211 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVH 194
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 62 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------NHLFRRSLPLPWSIRMKI 241
N++ I+D R V P G + + + S PL
Sbjct: 113 DNII-----AIKDILRPTV----PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 163
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
+GL ++H VI+RD K SN+L++ + K+ DFG+A+ + + T
Sbjct: 164 LYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 300 RVMGTYGYAAPEYVMT------ALELFCLKC 324
+ T Y APE +++ A++L+ + C
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGC 251
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 21/202 (10%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
R +F N + N+ + LG+G F V + V TGL A K +N
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTK 65
Query: 175 GLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
L ++ E L H N+V+L E+ LV++ + G L + R
Sbjct: 66 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDG 289
I + +A+ H +++R+ K N+LL + KL+DFGLA +
Sbjct: 126 SEADASHCIQ-QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 290 PEGDKTHVSTRVMGTYGYAAPE 311
+ + H GT GY +PE
Sbjct: 182 NDSEAWH---GFAGTPGYLSPE 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
F + + + ++ + +LG+G FG V K I TG AVK ++ +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQV 64
Query: 177 QGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + L EV L L H N+ KL + + LV E G L + + R
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RF 123
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGP 290
+I G+ + H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 124 SEVDAARIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 291 EGDKTHVSTRVMGTYGYAAPEYVMTALELFC 321
K +GT Y APE + + C
Sbjct: 181 ASKKXKDK---IGTAYYIAPEVLHGTYDEKC 208
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV G C+ D+ +LV EF+ GSL+ +L + + ++++A A + FL E
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDADYN--------AKLSDFGLA 286
+I+ + NILL + + KLSD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-- 181
+KL NF +LG+G FG V + GT AVK L D + +
Sbjct: 17 MKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDELYAVKILKKDVVIQDDDVE 65
Query: 182 -WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLP 234
+ E L + + C + RL V E++ G L H+ F+ +
Sbjct: 66 CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF 125
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK 294
++ + I GL FL + +IYRD K N++LD++ + K++DFG+ K E
Sbjct: 126 YAAEIAI------GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIW 173
Query: 295 THVSTRVM-GTYGYAAPEYV 313
V+T+ GT Y APE +
Sbjct: 174 DGVTTKXFCGTPDYIAPEII 193
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 130 NFRPESLLGEGGFGCVFKGW---------IEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
+ WL NF VK + + + E+ G+L + + +L
Sbjct: 67 YYAAWLERRNF---------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
++ + L+++H + +I+RD K NI +D N K+ DFGLAK+
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 25 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 192 LVHLNLVKLIGYCIEDDQRL--------LVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD---GPEGDKTHV 297
+ GL ++H +++RD K +N+L+ D KL+DFGLA+
Sbjct: 129 VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 298 STRVMGTYGYAAPEYVM 314
RV+ T Y PE ++
Sbjct: 186 XNRVV-TLWYRPPELLL 201
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQRL--------LVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD---GPEGDKTHV 297
+ GL ++H +++RD K +N+L+ D KL+DFGLA+
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 298 STRVMGTYGYAAPEYVM 314
RV+ T Y PE ++
Sbjct: 187 XNRVV-TLWYRPPELLL 202
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 44/211 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVH 194
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 63 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-------------HLFRRSLPLPWSIRMKI 241
N++ I+D R V P G ++ + S PL
Sbjct: 114 DNII-----AIKDILRPTV----PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 164
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD--GPEGDKTHVST 299
+GL ++H VI+RD K SN+L++ + K+ DFG+A+ + + T
Sbjct: 165 LYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 300 RVMGTYGYAAPEYVMT------ALELFCLKC 324
+ T Y APE +++ A++L+ + C
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGC 252
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQRL--------LVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD---GPEGDKTHV 297
+ GL ++H +++RD K +N+L+ D KL+DFGLA+
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 298 STRVMGTYGYAAPEYVM 314
RV+ T Y PE ++
Sbjct: 187 XNRVV-TLWYRPPELLL 202
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 208 DQRLLVYEFMPRGSL---ENHLF----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV 260
D+ ++YE+M S+ + + F + +P + I +++H E + +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNI 173
Query: 261 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
+RD K SNIL+D + KLSDFG ++ DK +R GTY + PE+
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESE--YMVDKKIKGSR--GTYEFMPPEF 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVMTAL 317
Y APE ++ A+
Sbjct: 188 YRAPEIMLNAM 198
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 36/177 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGW---------IEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
+ WL NF+ + + + +E + +Y+ + +L LFR+ L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ L+++H + +I+RD K NI +D N K+ DFGLAK+
Sbjct: 127 ---------------EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG AVK + L+G + + E+ L + H N+V L + LV + +
Sbjct: 45 ATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSG 104
Query: 220 GSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL---DA 274
G L + + + S ++ L A + +LH +++RD K N+L D
Sbjct: 105 GELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLHRMG---IVHRDLKPENLLYYSQDE 158
Query: 275 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +SDFGL+K +GD V + GT GY APE
Sbjct: 159 ESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPE 192
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN----HDGLQGHKEWLAEV 186
+R + LGEG +G V+K + T TVA+K + +G+ G + EV
Sbjct: 36 YRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA--IREV 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA---- 242
+ L +L H N+++L + + L++E+ EN L + P + M++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNP-DVSMRVIKSFL 138
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILL---DADYNA--KLSDFGLAKDGPEGDKTHV 297
G+ F H R ++RD K N+LL DA K+ DFGLA+ G
Sbjct: 139 YQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQ 193
Query: 298 STRVMGTYGYAAPEYVM------TALELFCLKC 324
T + T Y PE ++ T+++++ + C
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 54
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 113
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVM 302
+ +A+ H +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 167
Query: 303 GTYGYAAPE 311
GT GY +PE
Sbjct: 168 GTPGYLSPE 176
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVM 302
+ +A+ H +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 303 GTYGYAAPE 311
GT GY +PE
Sbjct: 169 GTPGYLSPE 177
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 129 RNFRPE-----SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 4 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 54
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 55 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 112
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
L +LH + +I+RD K NILL+ D + +++DFG AK K +
Sbjct: 113 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 300 RVMGTYGYAAPE 311
+GT Y +PE
Sbjct: 170 XFVGTAQYVSPE 181
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVM 302
+ +A+ H +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 303 GTYGYAAPE 311
GT GY +PE
Sbjct: 169 GTPGYLSPE 177
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 17/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V + + TG A K + + E+ + L H
Sbjct: 59 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 257 ERPVIYRDFKTSNILLDADYNA--KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 129 RNFRPE-----SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 2 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 52
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 53 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 110
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
L +LH + +I+RD K NILL+ D + +++DFG AK K +
Sbjct: 111 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 300 RVMGTYGYAAPE 311
+GT Y +PE
Sbjct: 168 XFVGTAQYVSPE 179
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 129 RNFRPE-----SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 3 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 53
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 54 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 111
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
L +LH + +I+RD K NILL+ D + +++DFG AK K +
Sbjct: 112 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 300 RVMGTYGYAAPE 311
+GT Y +PE
Sbjct: 169 XFVGTAQYVSPE 180
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 129 RNFRPE-----SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 5 RKKRPEDFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVP 55
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 56 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 113
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
L +LH + +I+RD K NILL+ D + +++DFG AK K +
Sbjct: 114 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 300 RVMGTYGYAAPE 311
+GT Y +PE
Sbjct: 171 XFVGTAQYVSPE 182
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 17/177 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V + + E T G A K + + E+ + L H
Sbjct: 165 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 257 ERPVIYRDFKTSNILLDADYNA--KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
T VA+K + + L+G + + E+ L + H N+V L L+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 221 SLENHLFRRSLPLPWSIR--MKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL---LDAD 275
L + + + ++ R ++ + +LH+ +++RD K N+L LD D
Sbjct: 102 ELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDED 155
Query: 276 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+SDFGL+K D V + GT GY APE
Sbjct: 156 SKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPE 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NIL+ A K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD 168
Query: 291 EGDKTHVSTRVMGTYGYAAPEY-----VMTALELFCLKC 324
G+ + V+GT Y +PE V +++ L C
Sbjct: 169 SGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR--MKIALGAA 246
L + H N+V L L+ + + G L + + + ++ R ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVL 126
Query: 247 KGLAFLHEEAERPVIYRDFKTSNIL---LDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG 303
+ +LH+ +++RD K N+L LD D +SDFGL+K D V + G
Sbjct: 127 DAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACG 180
Query: 304 TYGYAAPE 311
T GY APE
Sbjct: 181 TPGYVAPE 188
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 306 GYAAPE 311
Y +PE
Sbjct: 196 QYVSPE 201
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+MP G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D K++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 306 GYAAPE 311
Y +PE
Sbjct: 196 QYVSPE 201
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+MP G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D K++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
T VA+K + + L+G + + E+ L + H N+V L L+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 221 SLENHLFRRSLPLPWSIR--MKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL---LDAD 275
L + + + ++ R ++ + +LH+ +++RD K N+L LD D
Sbjct: 102 ELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDED 155
Query: 276 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+SDFGL+K D V + GT GY APE
Sbjct: 156 SKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPE 188
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 15 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 65
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 66 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 123
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 306 GYAAPE 311
Y +PE
Sbjct: 181 QYVSPE 186
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 28/185 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G F V+KG ++ T V + + L Q KE E L L H N
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEV---AWCELQDRKLTKSERQRFKE---EAEXLKGLQHPN 86
Query: 197 LVKLIGY---------CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
+V+ CI +LV E G+L+ +L R + +R K
Sbjct: 87 IVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLR-SWCRQILK 140
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
GL FLH P+I+RD K NI + + K+ D GLA + + V+GT
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPE 195
Query: 307 YAAPE 311
+ APE
Sbjct: 196 FXAPE 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
T VA+K + L+G + + E+ L + H N+V L L+ + + G
Sbjct: 42 TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 221 SLENHLFRRSLPLPWSIR--MKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL---LDAD 275
L + + + ++ R ++ + +LH+ +++RD K N+L LD D
Sbjct: 102 ELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDED 155
Query: 276 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+SDFGL+K D V + GT GY APE
Sbjct: 156 SKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPE 188
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 306 GYAAPE 311
Y +PE
Sbjct: 197 QYVSPE 202
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 306 GYAAPE 311
Y +PE
Sbjct: 197 QYVSPE 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 306 GYAAPE 311
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
N+V+ +G E+ + E +P GSL L + PL + I + GL +L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 138
Query: 253 HEEAERPVIYRDFKTSNILLDADYNA--KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
H+ +++RD K N+L++ Y+ K+SDFG +K + GT Y AP
Sbjct: 139 HDNQ---IVHRDIKGDNVLINT-YSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 192
Query: 311 EYV 313
E +
Sbjct: 193 EII 195
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 142
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 306 GYAAPE 311
Y +PE
Sbjct: 200 QYVSPE 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 142
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 306 GYAAPE 311
Y +PE
Sbjct: 200 QYVSPE 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 306 GYAAPE 311
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NI++ A K+ DFG+A+
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 291 EGDKTHVSTRVMGTYGYAAPE 311
G+ + V+GT Y +PE
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPE 206
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV G C D+ +LV EF+ GSL+ +L + + ++++A A + FL E
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDADYN--------AKLSDFGLA 286
+I+ + NILL + + KLSD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 306 GYAAPE 311
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 308 AAPE 311
+PE
Sbjct: 201 VSPE 204
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NI++ A K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 291 EGDKTHVSTRVMGTYGYAAPE 311
G+ + V+GT Y +PE
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPE 189
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G+G FG V +++N T + A+K +N E E+ + L
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKM-------YAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H LV L Y +D++ + +V + + G L HL + ++++ I L +L
Sbjct: 74 HPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYL 131
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +I+RD K NILLD + ++DF +A P +T ++T + GT Y APE
Sbjct: 132 QNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPE 184
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NI++ A K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 291 EGDKTHVSTRVMGTYGYAAPE 311
G+ + V+GT Y +PE
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPE 189
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 306 GYAAPE 311
Y +PE
Sbjct: 197 QYVSPE 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 33 SPIGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 193 YRAPEIML 200
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NI++ A K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 291 EGDKTHVSTRVMGTYGYAAPEY-----VMTALELFCLKC 324
G+ + V+GT Y +PE V +++ L C
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 308 AAPE 311
+PE
Sbjct: 199 VSPE 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 306 GYAAPE 311
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD-GP 290
P+ +++ A + L F H+ +I+RD K +NI++ A K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 291 EGDKTHVSTRVMGTYGYAAPEY-----VMTALELFCLKC 324
G+ + V+GT Y +PE V +++ L C
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 305
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 306 GYAAPE 311
Y +PE
Sbjct: 199 QYVSPE 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
L +LH + +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 308 AAPE 311
+PE
Sbjct: 204 VSPE 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHV 297
L G +LH+ +++RD K N+LL++ D K+ DFGL+ G K
Sbjct: 112 QVLS---GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 163
Query: 298 STRVMGTYGYAAPEYVMTALELFC 321
+GT Y APE + + C
Sbjct: 164 -KERLGTAYYIAPEVLRKKYDEKC 186
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 186 YRAPEIML 193
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 95
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 150
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 199
Query: 310 PEYVMT 315
PE +++
Sbjct: 200 PEIILS 205
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 39 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 146
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 199 YRAPEIML 206
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 190 YRAPEIML 197
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 15 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
N+V+ +G E+ + E +P GSL L + PL + I + GL +L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 124
Query: 253 HEEAERPVIYRDFKTSNILLDADYNA--KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
H+ +++RD K N+L++ Y+ K+SDFG +K + GT Y AP
Sbjct: 125 HDNQ---IVHRDIKGDNVLINT-YSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 178
Query: 311 EYV 313
E +
Sbjct: 179 EII 181
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 193 YRAPEIML 200
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 142
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 195 YRAPEIML 202
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D K++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 227
Query: 310 PEYVMT 315
PE +++
Sbjct: 228 PEIILS 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 142
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 195 YRAPEIML 202
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 198 VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLP------WSIRMKIALGAAKGLA 250
+ + Y +DD L LV ++ G L L + LP + M IA+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 306
++H RD K NIL+D + + +L+DFG L +DG T S+ +GT
Sbjct: 196 YVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG-----TVQSSVAVGTPD 241
Query: 307 YAAPEYVMTALE 318
Y +PE ++ A+E
Sbjct: 242 YISPE-ILQAME 252
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN---LVKLIGYCIEDDQRL-LVYEFM 217
TG A+K L+ + KE +N L +N LVKL + +D+ L +V E+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYA 123
Query: 218 PRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
P G + +HL R S P +I L +LH +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 275 DYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMT 315
K++DFGLAK V R + GT Y APE +++
Sbjct: 177 QGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILS 212
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 147
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 200 YRAPEIML 207
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 147
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 200 YRAPEIML 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 142
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 195 YRAPEIML 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 141
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 131
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 184 YRAPEIML 191
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 141
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 190 YRAPEIML 197
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 25 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 185 YRAPEIML 192
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
+P I KIA+ K L LH + VI+RD K SN+L++A K+ DFG++ G
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLV 205
Query: 293 DKTHVSTRVMGTYGYAAPEYVMTAL 317
D T G Y APE + L
Sbjct: 206 DSV-AKTIDAGCKPYMAPERINPEL 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 25 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 185 YRAPEIML 192
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 190 YRAPEIML 197
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 51 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 158
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 211 YRAPEIML 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 39 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 146
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 199 YRAPEIML 206
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 26 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 133
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 134 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 186 YRAPEIML 193
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHV 297
L G +LH+ +++RD K N+LL++ D K+ DFGL+ G K
Sbjct: 129 QVLS---GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 180
Query: 298 STRVMGTYGYAAPEYVMTALELFC 321
+GT Y APE + + C
Sbjct: 181 -KERLGTAYYIAPEVLRKKYDEKC 203
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 47 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 154
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 207 YRAPEIML 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 48 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 155
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 208 YRAPEIML 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 35 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 142
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 195 YRAPEIML 202
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 193 YRAPEIML 200
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 95
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 152
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 202
Query: 313 VMT 315
+++
Sbjct: 203 ILS 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 27 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 134
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 135 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 187 YRAPEIML 194
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 34 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 141
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 51 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 158
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 211 YRAPEIML 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 40 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 147
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 200 YRAPEIML 207
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 33 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 193 YRAPEIML 200
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 30 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 190 YRAPEIML 197
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA 286
+P I KIA+ K L LH + VI+RD K SN+L++A K+ DFG++
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLI-----GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
H N++ L+ +E+ + + + L N +S L + +
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKSQKLTDDHVQFLIYQILR 136
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
GL ++H +I+RD K SN+ ++ D K+ DFGL + + +V+TR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WY 188
Query: 308 AAPEYVM 314
APE ++
Sbjct: 189 RAPEIML 195
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D K++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE----AERPVI-YR 263
Q L+ ++ GSL ++L +S L +K+A + GL LH E +P I +R
Sbjct: 109 QLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 264 DFKTSNILLDADYNAKLSDFGLA----KDGPEGDKTHVSTRVMGTYGYAAPEYVMTAL 317
D K+ NIL+ + ++D GLA D E D +TRV GT Y PE + +L
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD-IPPNTRV-GTKRYMPPEVLDESL 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 88
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 89 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 143
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLA 192
Query: 310 PEYVMT 315
PE +++
Sbjct: 193 PEIILS 198
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D K++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN---LVKLIGYCIEDDQRL-LVYEFM 217
TG A+K L+ + KE +N L +N LVKL + +D+ L +V E+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYA 123
Query: 218 PRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
P G + +HL R S P +I L +LH +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 275 DYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMT 315
+++DFGLAK V R + GT Y APE +++
Sbjct: 177 QGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILS 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ D+GLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD--QRLLVYEFMP 218
G + V V + + +++ E L H N++ ++G C L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 219 RGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD-FKTSNILLDADY 276
GSL N L + + S +K AL A+G+AFLH P+I R + ++++D D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDM 150
Query: 277 NAKLS 281
A++S
Sbjct: 151 TARIS 155
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG VF+ + E+ VA+K + LQ + E+ + + H
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMP----RGSLENHLFRRSLPLPWSIRMKIAL-G 244
N+V L + + + LV E++P R S ++++P+ + +K+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYMYQ 149
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMG 303
+ LA++H + +RD K N+LLD KL DFG AK G+ + +
Sbjct: 150 LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXIC 203
Query: 304 TYGYAAPEYVMTA 316
+ Y APE + A
Sbjct: 204 SRYYRAPELIFGA 216
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 160
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 210
Query: 313 VMT 315
+++
Sbjct: 211 ILS 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D K++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 72/183 (39%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E+ P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+++D K++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V + VK +GL +AVK L+ + K E+ L +
Sbjct: 57 SPVGSGAYGSVCSSY-------DVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 164
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 217 YRAPEIML 224
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA 286
+P I KIA+ K L LH + VI+RD K SN+L++A K DFG++
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK-DGPEGDKTHVSTRVMGTYG 306
GL LHE V++RD NILL + + + DF LA+ D + +KTH T
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RW 198
Query: 307 YAAPEYVM 314
Y APE VM
Sbjct: 199 YRAPELVM 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK-DGPEGDKTHVSTRVMGTYG 306
GL LHE V++RD NILL + + + DF LA+ D + +KTH T
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RW 198
Query: 307 YAAPEYVM 314
Y APE VM
Sbjct: 199 YRAPELVM 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 184
Query: 308 AAPEYVM 314
APE ++
Sbjct: 185 RAPEVIL 191
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
+ + + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D K++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
+ + + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D K++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 312
H +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEI 230
Query: 313 VMT 315
+++
Sbjct: 231 ILS 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 196
Query: 308 AAPEYVM 314
APE ++
Sbjct: 197 RAPEVIL 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 308 AAPEYVM 314
APE ++
Sbjct: 186 RAPEVIL 192
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 308 AAPEYVM 314
APE ++
Sbjct: 186 RAPEVIL 192
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 308 AAPEYVM 314
APE ++
Sbjct: 193 RAPEVIL 199
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 184
Query: 308 AAPEYVM 314
APE ++
Sbjct: 185 RAPEVIL 191
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 308 AAPEYVM 314
APE ++
Sbjct: 186 RAPEVIL 192
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 27/198 (13%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--- 179
+++ R+ +P +G G +G V + V TG VA+K L + Q
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKL-YRPFQSELFA 68
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIED---DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
K E+ L + H N++ L+ D D Y MP + + L
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH 296
+ KGL ++H +I+RD K N+ ++ D K+ DFGLA+
Sbjct: 129 RIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX 185
Query: 297 VSTRVMGTYGYAAPEYVM 314
V TR Y APE ++
Sbjct: 186 VVTR-----WYRAPEVIL 198
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 190
Query: 308 AAPEYVM 314
APE ++
Sbjct: 191 RAPEVIL 197
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 308 AAPEYVM 314
APE ++
Sbjct: 193 RAPEVIL 199
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 184 YRAPEIML 191
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 207 YRAPEIML 214
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 308 AAPEYVM 314
APE ++
Sbjct: 193 RAPEVIL 199
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 208 YRAPEIML 215
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TG VAVK L+ + K E+ L +
Sbjct: 24 SPVGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + + ++ I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLI-YQIL 131
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 184 YRAPEIML 191
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 310 PEYVMT 315
PE +++
Sbjct: 208 PEIILS 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 146 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 198 YRAPEIML 205
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 229
Query: 308 AAPEYVM 314
APE ++
Sbjct: 230 RAPEVIL 236
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 194 YRAPEIML 201
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 36/177 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGW---------IEENGTAPVKPGTGLTVA--VKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
+ WL NF+ + + E + +Y+ + +L LFR+ L
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ L+++H + +I+R+ K NI +D N K+ DFGLAK+
Sbjct: 127 ---------------EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G ++ V+ Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 229
Query: 308 AAPEYVM 314
APE ++
Sbjct: 230 RAPEVIL 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL 226
LN+V L+G C + L+V EF G+L +L
Sbjct: 84 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 30 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL 226
LN+V L+G C + L+V EF G+L +L
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ + + +D+ L +V E+ P G + +HL R R A +LH
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 160
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+++D K++DFG AK V R + GT Y APE
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 210
Query: 313 VMT 315
+++
Sbjct: 211 ILS 213
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL 226
LN+V L+G C + L+V EF G+L +L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
+ AKG+ FL A R I+RD NILL K+ DFGLA+D
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL 226
LN+V L+G C + L+V EF G+L +L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 47/196 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLV 193
+G G +G V + + +G VA+K L+ Q K E+ L +
Sbjct: 32 VGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKI----------- 241
H N++ L+ F P SL N + F +P + KI
Sbjct: 82 HENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQ 129
Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST 299
KGL ++H V++RD K N+ ++ D K+ DFGLA+ +V T
Sbjct: 130 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 186
Query: 300 RVMGTYGYAAPEYVMT 315
R Y APE +++
Sbjct: 187 R-----WYRAPEVILS 197
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 89
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 90 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 144
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 193
Query: 310 PEYVMT 315
PE +++
Sbjct: 194 PEIILS 199
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
KGL ++H V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 206
Query: 307 YAAPEYVMT 315
Y APE +++
Sbjct: 207 YRAPEVILS 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 37/209 (17%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHDGLQGHKE 181
+++L +F ++G G FG V A VK T A+K LN + E
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTERIYAMKILNKWEMLKRAE 117
Query: 182 WLA-----EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW 235
+V GD + + Y +D+ L LV ++ G L L + LP
Sbjct: 118 TACFREERDVLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 174
Query: 236 SI------RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG 289
+ M +A+ + L ++H RD K N+LLD + + +L+DFG
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKM 225
Query: 290 PEGDKTHVSTRVMGTYGYAAPEYVMTALE 318
+ D T S+ +GT Y +PE ++ A+E
Sbjct: 226 ND-DGTVQSSVAVGTPDYISPE-ILQAME 252
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 198 VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSI------RMKIALGAAKGLA 250
+ + Y +D+ L LV ++ G L L + LP + M +A+ + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 310
++H RD K N+LLD + + +L+DFG + D T S+ +GT Y +P
Sbjct: 212 YVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAVGTPDYISP 261
Query: 311 EYVMTALE 318
E ++ A+E
Sbjct: 262 E-ILQAME 268
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYY 189
Query: 308 AAPEYVM 314
APE ++
Sbjct: 190 RAPEVIL 196
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 78/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYEFM-----------PRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E M RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 168
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 169 ----VYTDFDGTRVYSPPEWI 185
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAF 251
H N+++LI + E+D+ LV+E M GS+ +H+ +R L S+ + A L F
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 252 LHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGP-EGDKTHVSTRVM----G 303
LH + + +RD K NIL + K+ DFGL GD + +ST + G
Sbjct: 127 LHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 304 TYGYAAPEYV 313
+ Y APE V
Sbjct: 184 SAEYMAPEVV 193
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
+G+G F V + VK TG A K +N L H++ E L H
Sbjct: 12 IGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLH 118
Query: 255 EAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ V++RD K N+LL + KL+DFGLA + +GD+ GT GY +PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGYLSPE 176
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G+G F V + E G + + K + GL ++ E + L H
Sbjct: 31 VIGKGAFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGLST-EDLKREASICHMLKHP 86
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFL 252
++V+L+ D +V+EFM L + +R+ ++ + L +
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 253 HEEAERPVIYRDFKTSNILLDADYNA---KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 309
H+ +I+RD K N+LL + N+ KL DFG+A G+ V+ +GT + A
Sbjct: 147 HDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMA 201
Query: 310 PEYV 313
PE V
Sbjct: 202 PEVV 205
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ FGLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 97
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 98 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 154
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 155 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 204
Query: 313 VMT 315
+++
Sbjct: 205 ILS 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHV 297
L G+ +LH+ +++RD K N+LL++ D K+ DFGL+ K
Sbjct: 144 QVLS---GVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM-- 195
Query: 298 STRVMGTYGYAAPEYVMTALELFC 321
+GT Y APE + + C
Sbjct: 196 -KERLGTAYYIAPEVLRKKYDEKC 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 307 YAAPEYVMT 315
Y APE ++
Sbjct: 208 YRAPEIMLN 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 209
Query: 313 VMT 315
+++
Sbjct: 210 ILS 212
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 180
Query: 256 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEY 312
+IYRD K N+L+D +++DFG AK V R + GT Y APE
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEI 230
Query: 313 VMT 315
+++
Sbjct: 231 ILS 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+++D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIIIS 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ G + V+ Y Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-Y 193
Query: 308 AAPEYVM 314
APE ++
Sbjct: 194 RAPEVIL 200
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 184 YRAPEIML 191
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD 288
P+ + + A+G+ FL + R I+RD NILL + K+ DFGLA+D
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARD 248
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V ++ + K T TVAVK L +K + E+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL 226
LN+V L+G C + L+V E+ G+L N+L
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLV 193
L+G G +G V + + + VA+K + + L K L E+ L L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKR---------VVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 194 HLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
H ++VK++ I D + +V E S LFR + L + G
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK--DGPEG 292
+ ++H +++RD K +N L++ D + K+ DFGLA+ D PE
Sbjct: 169 VKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 307
G+ LH +I+RD K SNI++ +D K+ DFGLA+ + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYY 191
Query: 308 AAPEYVM 314
APE ++
Sbjct: 192 RAPEVIL 198
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILESVNH 118
Query: 255 EAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+++RD K N+LL + KL+DFGLA + +GD+ GT GY +PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQ-QAWFGFAGTPGYLSPE 176
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
+A +N L H + +++L Y I D +Y M G+++ N ++ + PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
R + + +H+ +++ D K +N L+ D KL DFG+A + V
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 184
Query: 298 STRVMGTYGYAAPEYV 313
+GT Y PE +
Sbjct: 185 KDSQVGTVNYMPPEAI 200
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 119 VLEAVRHCHNXG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 165 ----VYTDFDGTRVYSPPEWI 181
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDL 192
S +G G +G V A TGL VAVK L+ + K E+ L +
Sbjct: 28 SPVGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 193 VHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQIL 135
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 184 ----VYTDFDGTRVYSPPEWI 200
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
PE +++
Sbjct: 207 PEIILS 212
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 184 ----VYTDFDGTRVYSPPEWI 200
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILESVNH 118
Query: 255 EAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+++RD K N+LL + KL+DFGLA + +GD+ GT GY +PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQ-QAWFGFAGTPGYLSPE 176
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 185 ----VYTDFDGTRVYSPPEWI 201
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 168
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 169 ----VYTDFDGTRVYSPPEWI 185
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 197 ----VYTDFDGTRVYSPPEWI 213
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 170 ----VYTDFDGTRVYSPPEWI 186
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 197 ----VYTDFDGTRVYSPPEWI 213
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 185 ----VYTDFDGTRVYSPPEWI 201
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 198 ----VYTDFDGTRVYSPPEWI 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 170 ----VYTDFDGTRVYSPPEWI 186
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 212 ----VYTDFDGTRVYSPPEWI 228
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 198 ----VYTDFDGTRVYSPPEWI 214
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 197 ----VYTDFDGTRVYSPPEWI 213
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 198 ----VYTDFDGTRVYSPPEWI 214
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 197 ----VYTDFDGTRVYSPPEWI 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 145
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 146 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 191
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 192 ----VYTDFDGTRVYSPPEWI 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 170 ----VYTDFDGTRVYSPPEWI 186
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 185 ----VYTDFDGTRVYSPPEWI 201
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 198 ----VYTDFDGTRVYSPPEWI 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG GG G VF V VA+K + Q K L E+ + L H N
Sbjct: 19 LGCGGNGLVFSA---------VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 197 LVKL--------------IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+VK+ +G E + +V E+M L N L + L L R+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPL-LEEHARL-FM 126
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDA-DYNAKLSDFGLAK--DGPEGDKTHVST 299
+GL ++H V++RD K +N+ ++ D K+ DFGLA+ D K H+S
Sbjct: 127 YQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 300 RVMGTYGYAAPEYVMT 315
++ T Y +P +++
Sbjct: 184 GLV-TKWYRSPRLLLS 198
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 121
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 122 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 167
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 168 ----VYTDFDGTRVYSPPEWI 184
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 157
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 158 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 203
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 204 ----VYTDFDGTRVYSPPEWI 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 212 ----VYTDFDGTRVYSPPEWI 228
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
+A +N L H + +++L Y I D +Y M G+++ N ++ + PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV 297
R + + +H+ +++ D K +N L+ D KL DFG+A V
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVV 184
Query: 298 STRVMGTYGYAAPEYV 313
+GT Y PE +
Sbjct: 185 KDSQVGTVNYMPPEAI 200
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 170
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 171 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 216
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 217 ----VYTDFDGTRVYSPPEWI 233
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 119 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 165 ----VYTDFDGTRVYSPPEWI 181
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 258 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 314
+ +I+RD K NI++ D+ KL DFG A G + GT Y APE +M
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLM 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL--AKDGPEGDKTH 296
+ I + A+ + FLH + +++RD K SNI D K+ DFGL A D E ++T
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 297 VSTR--------VMGTYGYAAPEYV 313
++ +GT Y +PE +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQI 248
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGL--------AKDGPEGDKTHVSTR 300
LA LH + +++ D K +NI L KL DFGL A + EGD +++
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 301 VM-GTYGYAAPEYV--MTALELFC 321
++ G+YG AA + +T LE+ C
Sbjct: 227 LLQGSYGTAADVFSLGLTILEVAC 250
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAA 309
H +IYRD K N+L+D +++DFG AK V R + GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 310 PEYVMT 315
P +++
Sbjct: 207 PAIILS 212
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEG 292
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 119 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 293 DKTHVSTRVMGTYGYAAPEYV 313
V T GT Y+ PE++
Sbjct: 165 ----VYTDFDGTRVYSPPEWI 181
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 194 HLNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAA 246
H N+++L+ YC+ + + L+ F RG+L N + R + L + + LG
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG---PEGDKTHVSTRVMG 303
+GL +H + +RD K +NILL + L D G EG + ++ +
Sbjct: 145 RGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 304 ----TYGYAAPE 311
T Y APE
Sbjct: 202 AQRCTISYRAPE 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 117
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+++ D K +N L+ D KL DFG+A + V +GT Y PE +
Sbjct: 174 HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 24/188 (12%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
LLGEG + V V G AVK + EV L +
Sbjct: 20 LLGEGAYAKV---------QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+++LI + EDD R LV+E + GS+ H+ ++ ++ A L FLH
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLH 128
Query: 254 EEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDK-THVSTRVM----GTY 305
+ + +RD K NIL ++ K+ DF L + T ++T + G+
Sbjct: 129 TKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 306 GYAAPEYV 313
Y APE V
Sbjct: 186 EYMAPEVV 193
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 126
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+++ D K +N L+ D KL DFG+A + V +GT Y PE +
Sbjct: 127 HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
H +IYRD K N+L+D +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 306
+GL ++H +I+RD K SN+ ++ D K+ DF LA+ + +V+TR
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 307 YAAPEYVM 314
Y APE ++
Sbjct: 188 YRAPEIML 195
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 68
Query: 197 -LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLH 253
+++L Y I D +Y M G+++ N ++ + PW R + + +H
Sbjct: 69 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 124
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +++ D K +N L+ D KL DFG+A + V +GT Y PE +
Sbjct: 125 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 72
Query: 197 -LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLH 253
+++L Y I D +Y M G+++ N ++ + PW R + + +H
Sbjct: 73 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 128
Query: 254 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+ +++ D K +N L+ D KL DFG+A + V +GT Y PE +
Sbjct: 129 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 117
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+++ D K +N L+ D KL DFG+A + V +GT Y PE +
Sbjct: 174 HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
FL ++VH ++V++ + D+ +V E++ SL+ ++ LP + +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAY 187
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRV 301
L L++LH ++Y D K NI+L + KL D G + + +
Sbjct: 188 LLEILPALSYLHSIG---LVYNDLKPENIML-TEEQLKLIDLGAVS------RINSFGYL 237
Query: 302 MGTYGYAAPEYVMT 315
GT G+ APE V T
Sbjct: 238 YGTPGFQAPEIVRT 251
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 13 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + L + G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 122
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+LH + + + D K NI+L D N KL DFG+A G++ + GT
Sbjct: 123 YLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTP 175
Query: 306 GYAAPEYV 313
+ APE V
Sbjct: 176 EFVAPEIV 183
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 20 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + L + G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 129
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+LH + + + D K NI+L D N KL DFG+A G++ + GT
Sbjct: 130 YLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTP 182
Query: 306 GYAAPEYV 313
+ APE V
Sbjct: 183 EFVAPEIV 190
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAF 251
H N+++LI + E+D+ LV+E M GS+ +H+ +R L S+ + A L F
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 252 LHEEAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGP-EGDKTHVSTRVM----G 303
LH + + +RD K NIL + K+ DF L GD + +ST + G
Sbjct: 127 LHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 304 TYGYAAPEYV 313
+ Y APE V
Sbjct: 184 SAEYMAPEVV 193
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIRM 239
E+ L L H ++K+ + +D +V E M G L N + + + +M
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTH 296
+A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 130 LLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 177
Query: 297 VSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 178 LMRTLCGTPTYLAPEVLVSV 197
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD--QRLLVYEFMP 218
G + V V + + +++ E L H N++ ++G C L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 219 RGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD-FKTSNILLDADY 276
GSL N L + + S +K AL A+G AFLH P+I R + ++ +D D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALNSRSVXIDEDX 150
Query: 277 NAKLS 281
A++S
Sbjct: 151 TARIS 155
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 34 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + L + G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 143
Query: 251 FLHEEAERPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
+LH + + + D K NI+L D N KL DFG+A G++ + GT
Sbjct: 144 YLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTP 196
Query: 306 GYAAPEYV 313
+ APE V
Sbjct: 197 EFVAPEIV 204
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIRM 239
E+ L L H ++K+ + +D +V E M G L N + + + +M
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTH 296
+A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 123 LLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 170
Query: 297 VSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 171 LMRTLCGTPTYLAPEVLVSV 190
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIRM 239
E+ L L H ++K+ + +D +V E M G L N + + + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTH 296
+A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 124 LLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 297 VSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 172 LMRTLCGTPTYLAPEVLVSV 191
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIRM 239
E+ L L H ++K+ + +D +V E M G L N + + + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTH 296
+A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 124 LLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 297 VSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 172 LMRTLCGTPTYLAPEVLVSV 191
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIRM 239
E+ L L H ++K+ + +D +V E M G L N + + + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTH 296
+A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 124 LLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 297 VSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 172 LMRTLCGTPTYLAPEVLVSV 191
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + VK A K +N L H++ E L H
Sbjct: 39 LGKGAFSVVRRC---------VKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIHQILESVNH 145
Query: 255 EAERPVIYRDFKTSNILLDADYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 311
+ +++RD K N+LL + KL+DFGLA + +G++ GT GY +PE
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGEQ-QAWFGFAGTPGYLSPE 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + +D +V E M G L N + + + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKT 295
M +A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 248 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 295
Query: 296 HVSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSV 316
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 262 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE-----YVMTA 316
+RD K NIL+ AD A L DFG+A + T + V GT Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 317 LELFCLKC 324
+++ L C
Sbjct: 216 ADIYALTC 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + +D +V E M G L N + + + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKT 295
M +A+ +LHE +I+RD K N+LL + D K++DFG +K E T
Sbjct: 262 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 309
Query: 296 HVSTRVMGTYGYAAPEYVMTA 316
+ + GT Y APE +++
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSV 330
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 117
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 255 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
+++ D K +N L+ D KL DFG+A + V +G Y PE +
Sbjct: 174 HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 176 LQGHKEWLAEVNF-LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLP 234
+ G + W+ +++F D +L LV + Y + D L+ +F R E F
Sbjct: 116 VNGDRRWITQLHFAFQDENYLYLV--MEYYVGGDLLTLLSKFGERIPAEMARF------- 166
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK 294
+ + +A+ + L ++H RD K NILLD + +L+DFG D
Sbjct: 167 YLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLK-LRADG 216
Query: 295 THVSTRVMGTYGYAAPE 311
T S +GT Y +PE
Sbjct: 217 TVRSLVAVGTPDYLSPE 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 77/205 (37%), Gaps = 47/205 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+R LLG+GGFG VF G + L VA+K + + + G V
Sbjct: 32 EYRLGPLLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 190 GDLV----------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
++ H +++L+ + + +LV E R LF I
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFD-------YITE 132
Query: 240 KIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDADYN-AKLSDFG---LAKD 288
K LG F + R V++RD K NIL+D AKL DFG L D
Sbjct: 133 KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD 192
Query: 289 GPEGDKTHVSTRVMGTYGYAAPEYV 313
P D GT Y+ PE++
Sbjct: 193 EPYTD-------FDGTRVYSPPEWI 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK--IALGAAKGLAF 251
H N++ L + LV E M G L + + R+ +S R + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEY 136
Query: 252 LHEEAERPVIYRDFKTSNIL-LDADYNA---KLSDFGLAK 287
LH + V++RD K SNIL +D N ++ DFG AK
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK--IALGAAKGLAF 251
H N++ L + LV E M G L + + R+ +S R + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEY 136
Query: 252 LHEEAERPVIYRDFKTSNIL-LDADYNA---KLSDFGLAKD 288
LH + V++RD K SNIL +D N ++ DFG AK
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 260 VIYRDFKTSNILLDADY-NAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYV 313
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE++
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWI 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLAF 251
H N++ L + +V E M G L + + R+ +S R A+ K + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEY 131
Query: 252 LHEEAERPVIYRDFKTSNIL-LDADYNA---KLSDFGLAK 287
LH + V++RD K SNIL +D N ++ DFG AK
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 185 EVNFLGDLVHLNLVKLIG--YCIEDDQRLLVYEFMPRGSLE--NHLFRRSLPLPWSIRMK 240
E+ L L H N+++L+ Y E + +V E+ G E + + + P+ +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAK 287
L GL +LH + ++++D K N+LL K+S G+A+
Sbjct: 116 CQL--IDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|2R0C|A Chain A, Structure Of The Substrate-Free Form Of The Rebeccamycin
Biosynthetic Enzyme Rebc
pdb|2R0G|A Chain A, Chromopyrrolic Acid-Soaked Rebc With Bound 7-Carboxy-K252c
pdb|2R0G|B Chain B, Chromopyrrolic Acid-Soaked Rebc With Bound 7-Carboxy-K252c
pdb|2R0P|A Chain A, K252c-Soaked Rebc
pdb|3EPT|A Chain A, Structure Of The Rebeccamycin Biosynthetic Enzyme Rebc
With Reduced Flavin
pdb|3EPT|B Chain B, Structure Of The Rebeccamycin Biosynthetic Enzyme Rebc
With Reduced Flavin
Length = 549
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
L W + + A GL +EE RPV + +N+ L + +L GL DGP G
Sbjct: 339 LGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPP-GLHDDGPRG 397
Query: 293 DK 294
++
Sbjct: 398 ER 399
>pdb|4EIP|A Chain A, Native And K252c Bound Rebc-10x
pdb|4EIP|B Chain B, Native And K252c Bound Rebc-10x
pdb|4EIQ|A Chain A, Chromopyrrolic Acid-Soaked Rebc-10x With Bound
7-Carboxy-K252c
pdb|4EIQ|B Chain B, Chromopyrrolic Acid-Soaked Rebc-10x With Bound
7-Carboxy-K252c
Length = 549
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG 292
L W + + A GL +EE RPV + +N+ L + +L GL DGP G
Sbjct: 339 LGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPP-GLHDDGPRG 397
Query: 293 DK 294
++
Sbjct: 398 ER 399
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAE 185
T F +G G FG VFK VK G A+K G + L E
Sbjct: 10 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDEQNALRE 60
Query: 186 V---NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
V LG H ++V+ EDD L+ E+ GSL + + + + ++
Sbjct: 61 VYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 118
Query: 243 ---LGAAKGLAFLHEEAERPVIYRDFKTSNILL 272
L +GL ++H + +++ D K SNI +
Sbjct: 119 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAE 185
T F +G G FG VFK VK G A+K G + L E
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDEQNALRE 58
Query: 186 V---NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
V LG H ++V+ EDD L+ E+ GSL + + + + ++
Sbjct: 59 VYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 243 ---LGAAKGLAFLHEEAERPVIYRDFKTSNILL 272
L +GL ++H + +++ D K SNI +
Sbjct: 117 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAE 185
T F +G G FG VFK VK G A+K G + L E
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDEQNALRE 58
Query: 186 V---NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
V LG H ++V+ EDD L+ E+ GSL + + + + ++
Sbjct: 59 VYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 243 ---LGAAKGLAFLHEEAERPVIYRDFKTSNILL 272
L +GL ++H + +++ D K SNI +
Sbjct: 117 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAE 185
T F +G G FG VFK VK G A+K G + L E
Sbjct: 6 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDEQNALRE 56
Query: 186 V---NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
V LG H ++V+ EDD L+ E+ GSL + + + + ++
Sbjct: 57 VYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 114
Query: 243 ---LGAAKGLAFLHEEAERPVIYRDFKTSNILL 272
L +GL ++H + +++ D K SNI +
Sbjct: 115 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDADYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTY 305
K L + H +++RD K N+L+D ++ +L D+GLA+ G + +V RV Y
Sbjct: 142 KALDYCHSMG---IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRY 196
Query: 306 GYAAPEYVMT------ALELFCLKC 324
+ PE ++ +L+++ L C
Sbjct: 197 -FKGPELLVDYQMYDYSLDMWSLGC 220
>pdb|3ZDT|A Chain A, Crystal Structure Of Basic Patch Mutant Fak Ferm Domain
Fak31-405 K216a, K218a, R221a, K222a
pdb|3ZDT|B Chain B, Crystal Structure Of Basic Patch Mutant Fak Ferm Domain
Fak31-405 K216a, K218a, R221a, K222a
Length = 377
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 221 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 268
>pdb|2J0M|A Chain A, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase
Length = 371
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 221 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 268
>pdb|2AL6|A Chain A, Ferm Domain Of Focal Adhesion Kinase
pdb|2AL6|B Chain B, Ferm Domain Of Focal Adhesion Kinase
Length = 375
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
>pdb|2AEH|A Chain A, Focal Adhesion Kinase 1
pdb|2AEH|B Chain B, Focal Adhesion Kinase 1
Length = 369
Score = 27.7 bits (60), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,339,949
Number of Sequences: 62578
Number of extensions: 325163
Number of successful extensions: 2474
Number of sequences better than 100.0: 974
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 1008
length of query: 324
length of database: 14,973,337
effective HSP length: 99
effective length of query: 225
effective length of database: 8,778,115
effective search space: 1975075875
effective search space used: 1975075875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)