BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020562
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 256 bits (653), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%)
Query: 106 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTI 165
+PC+ ++D G + K SKE +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+
Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSF 123
Query: 166 GEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHY 225
GEEAI+IGSAAAL D I QYRE GV +WRG+T+ NQ N+ D GKGRQMP+H+
Sbjct: 124 GEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHF 183
Query: 226 GSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAV 285
GS+K+N TISSP+ TQLPQAVG +Y+ K+ + C + Y G+G SEGDFHAA+NFAA
Sbjct: 184 GSRKINLQTISSPLTTQLPQAVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAA 243
Query: 286 MEAPVVFICRNNGWAISTNISEQFRSTAI 314
+ P +F CRNN WAIST EQ++ I
Sbjct: 244 LSTPTIFFCRNNKWAISTPSKEQYKGDGI 272
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 250 bits (639), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 155/228 (67%), Gaps = 1/228 (0%)
Query: 88 KVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDS 147
K +T ++ + +P +RV + G++I S ++ ++KMY M L +MD
Sbjct: 41 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 100
Query: 148 VLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ 207
+LY++QRQGR SFY+T+ GEE ++GSAAAL D I QYRE GVLLWRGYT++ F NQ
Sbjct: 101 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQ 160
Query: 208 VFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEK-KDACAVAYT 266
+ N D GKGRQMP+H+G+K+ N++TISSP+ TQLPQAVG AY+ K +K + AV Y
Sbjct: 161 CYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYF 220
Query: 267 GDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAI 314
GDG SEGD HAA NFAA ++ P++F CRNNG+AIST SEQ+ I
Sbjct: 221 GDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGI 268
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 244 bits (622), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 166/270 (61%), Gaps = 13/270 (4%)
Query: 52 LFSPG-----RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRV 106
L+ PG RS Q SL DD Q FPG + ++ FI + +
Sbjct: 25 LWRPGARGLARSHPHRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGI 76
Query: 107 PCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIG 166
P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T G
Sbjct: 77 PIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYG 136
Query: 167 EEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYG 226
EE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG
Sbjct: 137 EEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYG 196
Query: 227 SKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVM 286
K+ +++TISSP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +
Sbjct: 197 CKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATL 256
Query: 287 EAPVVFICRNNGWAISTNISEQFRSTAITS 316
E P++F CRNNG+AIST SEQ+R I +
Sbjct: 257 ECPIIFFCRNNGYAISTPTSEQYRGDGIAA 286
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 162/260 (62%), Gaps = 8/260 (3%)
Query: 57 RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNG 116
RS Q SL DD Q FPG + ++ FI + +P +RV+D G
Sbjct: 35 RSHPPRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQG 86
Query: 117 ELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAA 176
++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAA
Sbjct: 87 QIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAA 146
Query: 177 ALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITIS 236
AL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TIS
Sbjct: 147 ALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTIS 206
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
SP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F CRN
Sbjct: 207 SPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRN 266
Query: 297 NGWAISTNISEQFRSTAITS 316
NG+AIST SEQ+R I +
Sbjct: 267 NGYAISTPTSEQYRGDGIAA 286
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 162/260 (62%), Gaps = 8/260 (3%)
Query: 57 RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNG 116
RS Q SL DD Q FPG + ++ FI + +P +RV+D G
Sbjct: 35 RSHPRRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQG 86
Query: 117 ELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAA 176
++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAA
Sbjct: 87 QIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAA 146
Query: 177 ALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITIS 236
AL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TIS
Sbjct: 147 ALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTIS 206
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
SP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F CRN
Sbjct: 207 SPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRN 266
Query: 297 NGWAISTNISEQFRSTAITS 316
NG+AIST SEQ+R I +
Sbjct: 267 NGYAISTPTSEQYRGDGIAA 286
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 164/264 (62%), Gaps = 12/264 (4%)
Query: 53 FSPGRSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVL 112
F P R + Q SL DD Q FPG + ++ FI + +P +RV+
Sbjct: 31 FHPSRQQQ----QQFPSL-----DDKPQ---FPGASAEFVDKLEFIQPNVISGIPIYRVM 78
Query: 113 DDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINI 172
D G++I S+ + +E +K+Y M L MD +LYE+QRQGR SFY+T GEE ++
Sbjct: 79 DRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHV 138
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNY 232
GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ ++
Sbjct: 139 GSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHF 198
Query: 233 ITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVF 292
+TISSP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F
Sbjct: 199 VTISSPLATQIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIF 258
Query: 293 ICRNNGWAISTNISEQFRSTAITS 316
CRNNG+AIST SEQ+R I +
Sbjct: 259 FCRNNGYAISTPTSEQYRGDGIAA 282
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 156/241 (64%), Gaps = 3/241 (1%)
Query: 76 DDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKM 135
DD Q FPG + ++ FI + +P +RV+D G++I S+ + +E +K
Sbjct: 46 DDKPQ---FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKF 102
Query: 136 YSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLL 195
Y M L MD +LYE+QR+GR SFY+T GEE ++GSAAAL D + QYRE GVL+
Sbjct: 103 YRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLM 162
Query: 196 WRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKM 255
+R Y L+ F +Q + N D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K
Sbjct: 163 YRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKR 222
Query: 256 EKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAIT 315
+ + Y G+G SEGD HA NFAA +E P++F CRNNG+AIST SEQ+R I
Sbjct: 223 ANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIA 282
Query: 316 S 316
+
Sbjct: 283 A 283
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 153/233 (65%)
Query: 84 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQ 143
FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L
Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLN 123
Query: 144 VMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQ 203
MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+
Sbjct: 124 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLEL 183
Query: 204 FANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAV 263
F Q + N +D GKGRQMP+HYG ++ +++TISSP+ATQ+PQAVG AY+ K + +
Sbjct: 184 FMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAKRANANRVVI 243
Query: 264 AYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAITS 316
Y G+G SEGD HA NFAA +E P++F CRNNG+AIST SEQ+R I +
Sbjct: 244 CYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAA 296
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 100 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS 159
E+S+ RVLDD+G + G Q+S E ++ M+ ++ D+ + AQRQ + S
Sbjct: 46 ETSDLAYSLVRVLDDDGHAV-GPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLS 104
Query: 160 FYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGR 219
FY+ +GEEAI AL D P YR+ G+L+ R Y L Q+ +N+AD KGR
Sbjct: 105 FYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGR 164
Query: 220 QMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAA 279
Q+PI Y SK+ + +IS +ATQ QAVG + ++ A A+ GDG T+E DFH A
Sbjct: 165 QLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGATAESDFHTA 224
Query: 280 LNFAAVMEAPVVFICRNNGWAIST 303
L FA V APV+ NN WAIST
Sbjct: 225 LTFAHVYRAPVILNVVNNQWAIST 248
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 123/222 (55%), Gaps = 8/222 (3%)
Query: 96 RFIPESSEKRVPCFRVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQR 154
RF P + E R++ + GE + DF + E ++Y M+ +++D R
Sbjct: 7 RFEPFTEEP----IRLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIR 60
Query: 155 QGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKA 213
G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KA
Sbjct: 61 TGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELFGQMLATKA 120
Query: 214 DDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSE 273
D KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV GDG TSE
Sbjct: 121 DPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSE 180
Query: 274 GDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAIT 315
GD++A +NFAAV AP VF+C NN +AIS + Q S I
Sbjct: 181 GDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIA 222
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFIL 185
++ + AV MY M+ + +D ++ R G+ F ++ G+EA +G+A AL + D++L
Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVL 70
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKAD-DGKGRQMPIHYGSKKLNYITISSPIATQLP 244
P YR+ GV+L G T + FA AD + GRQMP H+G KK +T SSP+ TQ+P
Sbjct: 71 PYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVP 130
Query: 245 QAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTN 304
AVG+A + +MEKKD A G+G +++GDFH NFAAV + PV+F+C NN +AIS
Sbjct: 131 HAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVP 190
Query: 305 ISEQFRSTAIT 315
+Q I+
Sbjct: 191 YDKQVACENIS 201
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 110 RVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEE 168
R++ + GE + DF + E ++Y M+ +++D R G+ SF G E
Sbjct: 17 RLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHE 74
Query: 169 AINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGS 227
A + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GS
Sbjct: 75 AAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGS 134
Query: 228 KKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVME 287
K LN+ T++SPIA+ +P A G A S+K+ + AV GDG TSEGD++A +NFAAV
Sbjct: 135 KALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQG 194
Query: 288 APVVFICRNNGWAISTNISEQFRSTAIT 315
AP VFI NN +AIS + Q S I
Sbjct: 195 APAVFIAENNFYAISVDYRHQTHSPTIA 222
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Query: 110 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEA 169
RVLD+ G+ +G + + ++ + M+ ++ DS + AQRQ + SFY+ ++GEEA
Sbjct: 56 RVLDEQGD-AQGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEA 114
Query: 170 INIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKK 229
I G A AL+ D P YR+ +L+ R +L + Q+ +N+ D KGRQ+PI Y ++
Sbjct: 115 IGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVRE 174
Query: 230 LNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAP 289
+ TIS +ATQ QAVG A + ++ A A+ GDG T+E DFH AL FA V AP
Sbjct: 175 AGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAP 234
Query: 290 VVFICRNNGWAIST 303
V+ NN WAIST
Sbjct: 235 VILNVVNNQWAIST 248
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q Q GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQ 308
FAA +AP +F+ +NN +AIST S+Q
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 9/206 (4%)
Query: 103 EKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYL 162
+K+ F++L++ GE++ + ++ + ++ MV +V+D RQGR FY
Sbjct: 20 KKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYA 79
Query: 163 TTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 222
T G+EA I + AL +DF+LP YR+ L+W G L Q F +G QMP
Sbjct: 80 PTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPL----YQAFLFSRGHFRGNQMP 135
Query: 223 IHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNF 282
+N ++ I Q Q GVA LK K A A+ YTGDGG S+GDF+ +NF
Sbjct: 136 -----DDVNALSPQIIIGAQYIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINF 190
Query: 283 AAVMEAPVVFICRNNGWAISTNISEQ 308
A +AP +F+ +NN +AIST + +Q
Sbjct: 191 AGAYKAPAIFVVQNNRYAISTPVEKQ 216
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 9/208 (4%)
Query: 101 SSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
++ + ++LD++G ++ ++ E V++ MV +++D RQGR F
Sbjct: 17 ETQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGF 76
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
Y T G+EA + S AL ++DFILP YR+ ++W G L F KG Q
Sbjct: 77 YAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQ 132
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S+GDF+ +
Sbjct: 133 FP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGI 187
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQ 308
NFA+ +AP +F+ +NN +AIST S+Q
Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 9/208 (4%)
Query: 101 SSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
++ + ++LD++G ++ ++ E V++ MV +++D RQGR F
Sbjct: 17 ETQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGF 76
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
Y T G+EA + S AL ++DFILP YR+ ++W G L F KG Q
Sbjct: 77 YAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQ 132
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S+GDF+ +
Sbjct: 133 FP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGI 187
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQ 308
NFA+ +AP +F+ +NN +AIST S+Q
Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQ 215
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 100 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS 159
E ++ P F++L++ GE++ ++S E ++ MV +++D RQGR
Sbjct: 15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG 74
Query: 160 FYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGR 219
FY T G+EA I S AL +DFILP YR+ ++W G L Q F G
Sbjct: 75 FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPL----YQAFLFSRGHFHGN 130
Query: 220 QMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAA 279
Q+P + +N + I Q QA GVA LKM K A A+ YTGDGGTS+GDF+
Sbjct: 131 QIP-----EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEG 185
Query: 280 LNFAAVMEAPVVFICRNNGWAISTNISEQ 308
+NFA +AP +F+ +NN +AIST + +Q
Sbjct: 186 INFAGAFKAPAIFVVQNNRFAISTPVEKQ 214
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 9/201 (4%)
Query: 108 CFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGE 167
++L++ GE++ + ++S + ++ MV +V+D RQGR FY T G+
Sbjct: 25 TLQILNEKGEVVNEAAMPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQ 84
Query: 168 EAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGS 227
EA + S AL A+DFILP YR+ L+W G L Q F G QMP
Sbjct: 85 EASQLASHFALEAEDFILPGYRDVPQLVWHGLPLYQ----AFLFSRGHFMGNQMP----- 135
Query: 228 KKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVME 287
+ +N + I Q+ Q GVA +K+ K + A+ YTGDGG S+GDF+ +NFA +
Sbjct: 136 ENVNALAPQIIIGAQIIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFK 195
Query: 288 APVVFICRNNGWAISTNISEQ 308
AP +F+ +NN +AIST + +Q
Sbjct: 196 APAIFVVQNNRYAISTPVEKQ 216
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 125 QQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFI 184
+ + +E +Y MV + +D+ QRQG + Y G+EA +G+AA L D++
Sbjct: 37 RDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWL 96
Query: 185 LPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYIT-----ISSPI 239
PQYRE GV L RG G + H G L + T +S PI
Sbjct: 97 FPQYRELGVYLVRGIPPGHV-----------GVAWRGTWHGG---LQFTTKCCAPMSVPI 142
Query: 240 ATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
TQ AVG A + + +D+ VA+ GDG TSEGD H ALNFAAV P VF +NN W
Sbjct: 143 GTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQW 202
Query: 300 AISTNISEQFRSTAITSFFFKFLSH 324
AIS +S R TA S K + +
Sbjct: 203 AISMPVS---RQTAAPSIAHKAIGY 224
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 113 DDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINI 172
D NG+++ ++ KE +KMY V + D + QRQGR Y +G+EA I
Sbjct: 1 DQNGKVVNEKMEPKLPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQI 60
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNY 232
G AAA+ D+ P YRE LL+RG L+ VF + +G P + +
Sbjct: 61 GMAAAMEPQDWNSPMYRELNTLLYRGDKLEN----VFLYWYGNERGSIKP-----EGVKI 111
Query: 233 ITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVF 292
+ + I +Q A G+A + K+ K + GDGGT+ G+F+ LNFAA +APVV
Sbjct: 112 LPTNIIIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVA 171
Query: 293 ICRNNGWAISTNI 305
+ +NN WAIST +
Sbjct: 172 VIQNNQWAISTPV 184
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 103 EKRVPC--FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
+ +VP ++V D+ G+LI + ++ E Y M ++MD + QR G+
Sbjct: 6 KNKVPTTLYQVYDNEGKLIDPNHKITLTDEQLKHAYYLMNLSRMMDKKMLVWQRAGKMLN 65
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
+ +GEEA+ +G L+ +D++ P +R ++L+RG +Q N+ KG Q
Sbjct: 66 FAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPEQLLLYWNGNE----KGSQ 121
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
+ Y + +N ITI + Q A G+ Y L +K+ AV GDGGT+EG+F+ A+
Sbjct: 122 IDAKYKTLPIN-ITIGA----QYSHAAGLGYMLHYKKQPNVAVTMIGDGGTAEGEFYEAM 176
Query: 281 NFAAVMEAPVVFICRNNGWAIST 303
N A++ + VF NN +AIST
Sbjct: 177 NIASIHKWNTVFCINNNQFAIST 199
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 103 EKRVPC--FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
+ +VP ++V D+ G+L+ + +S E + M ++MD + QR G+
Sbjct: 6 KNKVPTTLYQVYDNEGKLMDPNHKITLSNEQLKHAFYLMNLSRIMDKKMLVWQRAGKMLN 65
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
+ +GEEA+ +G L+ +D+ P +R ++L+RG +Q ++ N ++G +
Sbjct: 66 FAPNLGEEALQVGMGMGLNENDWFCPTFRSGALMLYRGVKPEQLL--LYWNGNENGSKIE 123
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
K + I+ I Q A G+ Y L +K AV GDGGT+EG+F+ A+
Sbjct: 124 -------AKYKTLPINITIGAQYSHAAGLGYMLHYKKLPNVAVTMIGDGGTAEGEFYEAM 176
Query: 281 NFAAVMEAPVVFICRNNGWAIST 303
N A++ + VF NN +AIST
Sbjct: 177 NIASIHKWNSVFCINNNQFAIST 199
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 20/230 (8%)
Query: 98 IPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVK------MYSHMVTLQVMD---SV 148
+PE +K P LDD+ + +G S E+ V +Y MVT++ ++
Sbjct: 42 VPEEHDKPFPV--KLDDS--VFEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELACDA 97
Query: 149 LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQV 208
LY+A++ F +IG+EA+ G A++ DD I+ YR G RG +++ ++
Sbjct: 98 LYKAKKIRGFCH--LSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGEL 155
Query: 209 FANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGD 268
+ KG+ +H +K N+ + + Q+P G+ ++ K +K A GD
Sbjct: 156 MGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGD 213
Query: 269 GGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAITSFF 318
G +++G A N A + PV+F C NN + + T+ RS+A+T F+
Sbjct: 214 GASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAE---RSSAMTEFY 260
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 126 QVSKEVAVKMYSHMVTLQVMD---SVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADD 182
+ SK ++MY MV ++ M+ LY+A++ F ++G+EAI +G A++ D
Sbjct: 75 ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCH--LSVGQEAIAVGIENAITKLD 132
Query: 183 FILPQYREPGVLLWRGYTLQQFANQVFANKA--DDGKGRQM----PIHYGSKKLNYITIS 236
I+ YR G RG +++ ++ +A GKG M P YG +
Sbjct: 133 SIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGNGI------ 186
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
+ Q+P G+A++ + + +DAC+ GDG +++G + N A + PVVF C N
Sbjct: 187 --VGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCEN 244
Query: 297 NGWAISTNISEQFRSTAITSFF 318
N + + T S RS+A+T +F
Sbjct: 245 NKYGMGTAAS---RSSAMTEYF 263
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 139 MVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRG 198
M +++ LY+A+ F G+EA+ IG AA++ D I+ YR+ + L RG
Sbjct: 69 MRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAIGMEAAITKKDAIITAYRDHCIFLGRG 126
Query: 199 YTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKK 258
+L + +++ +A KG+ +H+ K+ ++ + Q+P G+A++ K K+
Sbjct: 127 GSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFAQKYNKE 186
Query: 259 DACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAITSFF 318
+A A GDG ++G ALN +A+ + P + +C NN + + T ++R+ S++
Sbjct: 187 EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGT---AEWRAAKSPSYY 243
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 22/202 (10%)
Query: 126 QVSKEVAVKMYSHMVTLQVMD---SVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADD 182
Q +K ++MY M+ ++ M+ LY+A++ F +++G+EAI +G A++ D
Sbjct: 67 QTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCH--SSVGQEAIAVGIENAITKRD 124
Query: 183 FILPQYREPGVLLWRGYTLQQFANQVFANKADD--GKGRQM----PIHYGSKKLNYITIS 236
++ YR G RG +Q ++ + GKG M P YG +
Sbjct: 125 TVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAPGFYGGNGI------ 178
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
+ Q+P G+A++ + + +DAC+ A GDG +++G + N A + P VF C N
Sbjct: 179 --VGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAVFCCEN 236
Query: 297 NGWAISTNISEQFRSTAITSFF 318
N + + T + RS+A+T +F
Sbjct: 237 NKYGMGTAAA---RSSAMTEYF 255
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 122 SDFQQVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAAL 178
SD +K+ + ++ M + +++V LY+ + F T G+EA+ G +A+
Sbjct: 42 SDSTVTNKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYT--GQEAVCAGLESAI 99
Query: 179 SADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSP 238
+ DD I+ YR+ +L RG T ++ ++ + KG+ +H +K N+ +
Sbjct: 100 TKDDHIITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGI 157
Query: 239 IATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNG 298
+ Q P G+A++ K K +A GDG ++G A N A++ + PV+FIC NN
Sbjct: 158 VGAQCPLGAGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNK 217
Query: 299 WAISTNISEQFRSTAITSFF 318
+ + T+ Q RSTA F+
Sbjct: 218 YGMGTS---QKRSTAGHDFY 234
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 117 ELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINI 172
+L G D V+KE AV Y+ M+T++ M+S LY+ ++ F + G+EA +
Sbjct: 41 KLDSGPDINVHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYS--GQEACAV 98
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLN 231
G+ AA+ A D + YR G G ++ + ++ + G+ +H YG N
Sbjct: 99 GTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYGE---N 155
Query: 232 YITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVV 291
+ + + Q P G+A+++K K+ + GDG T++G ++N A + + PV+
Sbjct: 156 FYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVL 215
Query: 292 FICRNNGWAISTNISEQFRSTAITSFFFK 320
++C NNG+ + T + RS+A T ++ +
Sbjct: 216 YVCENNGYGMGTAAA---RSSASTDYYTR 241
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 134 KMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGV 193
K + M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ +
Sbjct: 66 KDMTEMRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAVGMEAAITKKDCIITAYRDHCI 123
Query: 194 LLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSL 253
L RG TL + ++ + +G+ +H+ K+ + + Q+P +G+A++
Sbjct: 124 FLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFAQ 183
Query: 254 KMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAIST 303
K +K+D A GDG ++G ALN AA+ + P + +C NN + + T
Sbjct: 184 KYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGT 233
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 117 ELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINI 172
+L G D V+KE A++ Y+ M T++ M++ LY+ ++ F + G+EA +
Sbjct: 36 KLDSGPDVNMHVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYS--GQEACAV 93
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLN 231
G AA+ D + YR G G + + ++ + G+ +H YG N
Sbjct: 94 GMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYGE---N 150
Query: 232 YITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVV 291
+ + + Q P G+A+++K +K+ + GDG T++G + ++N A + E PV+
Sbjct: 151 FYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVL 210
Query: 292 FICRNNGWAISTNISEQFRSTAITSFFFK 320
++C NNG+ + T+ + RS+A T ++ +
Sbjct: 211 YVCENNGYGMGTSAA---RSSASTDYYTR 236
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG ++++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSTAITSFF 318
R+ A T ++
Sbjct: 234 E---RAAASTDYY 243
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDF 183
+++E A+K Y M ++ M+S LY+ ++ F + G+EA +G AA++ D
Sbjct: 50 LNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYS--GQEACAVGMKAAMTEGDA 107
Query: 184 ILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQL 243
++ YR G G T+ + ++ A + G+ +H +K N+ + + Q
Sbjct: 108 VITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQ 165
Query: 244 PQAVGVAYSLKM-EKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAIS 302
P GVA ++K E+K+ C Y GDG ++G A N A + + PV+F+C NNG+ +
Sbjct: 166 PLGAGVALAMKYREQKNVCVTLY-GDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMG 224
Query: 303 TNISEQFRSTAITSFFFK 320
T RS+A T ++ +
Sbjct: 225 TTAE---RSSASTEYYTR 239
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 29 LTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVI 88
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG +++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 89 TAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 146
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
VG+A + K +KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 147 GVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 206
Query: 306 SEQFRSTAITSFF 318
R+ A T ++
Sbjct: 207 E---RAAASTDYY 216
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG+ ++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSTAITSFF 318
R+ A T ++
Sbjct: 234 E---RAAASTDYY 243
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E A+ MY M+ ++ + ++E QG F GEEA+ +G A L D I
Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
+R G + +G L ++F KG+ +H + + +
Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAIST 303
A G A + K ++ +V + GDG ++G FH LN AAV PVVF+ NNG+ +T
Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEAT 188
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 165 IGEEAINIGSAAALS-ADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPI 223
IG+EA+ +G AAL D ++ YRE G +L G + ++ + G+ +
Sbjct: 73 IGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSM 132
Query: 224 HYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFA 283
H S + + + + Q+P G+A++ K C+ AY GDG ++G + A N A
Sbjct: 133 HMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMA 192
Query: 284 AVMEAPVVFICRNNGWAISTNISEQFRSTAITS 316
A+ + PV+F+ NNG+A+ T+I TA++
Sbjct: 193 ALWKLPVIFVIENNGYAMGTSIQRANAHTALSE 225
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG ++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSTAITSFF 318
R+ A T ++
Sbjct: 234 E---RAAASTDYY 243
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGR-FSFYLTTIGEEAINIGSAAALSADDFIL 185
++KE +++Y M+ + + + + +G+ F F G+EA++ G L+ D ++
Sbjct: 79 ITKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVV 138
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR+ L +G + + +++F +G+ +H SK+ N + + I +P
Sbjct: 139 STYRDHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPV 198
Query: 246 AVGVAYSLKMEKK------DACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
A G A+S K ++ D VA+ GDG + G F LN AA+ + P++F+ NN W
Sbjct: 199 ATGAAFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLW 258
Query: 300 AI 301
AI
Sbjct: 259 AI 260
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 137 SHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLW 196
+ M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ +
Sbjct: 71 ARMRRMEIAADSLYKAKLIRGFCHLYD--GQEALAVGMEAAITKKDAIITSYRDHCTFIG 128
Query: 197 RGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKME 256
RG L +++ K G+ +H+ K ++ + Q+P G+A++ K
Sbjct: 129 RGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQKYN 188
Query: 257 KKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSTAITS 316
K +A A GDG ++G ALN +A+ + P + +C NN + + T +RS +
Sbjct: 189 KDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGT---ATWRSAKSPA 245
Query: 317 FF 318
+F
Sbjct: 246 YF 247
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 137 SHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLW 196
S M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ L
Sbjct: 68 SVMRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAVGMEAAITRSDSIITAYRDHCTYLA 125
Query: 197 RGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKME 256
RG L ++ +A +G+ +H+ K N+ + Q+P G+A++ K
Sbjct: 126 RGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYR 185
Query: 257 KKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAIST 303
K++ A GDG ++G ALN +A+ + P + +C NN + + T
Sbjct: 186 KEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGT 232
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF--SFYLTTIGEEAINIGSAAALSADDFI 184
+++E A+K Y +M ++ M+ + +Q +F F G+EA N+G A ++ D I
Sbjct: 57 LTREEALKYYRNMQVIRRMELKADQLYKQ-KFIRGFCHLCDGQEACNVGLEAGINPTDHI 115
Query: 185 LPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLP 244
+ YR G+ RG +++ ++ K KG+ +H +K N+ + + Q+P
Sbjct: 116 ITSYRAHGLCYTRGLSVKSILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 173
Query: 245 QAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTN 304
GVA + K K +A GDG ++G A N +A+ + P VFIC NN + + T
Sbjct: 174 LGAGVALACKYLKNGQICLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNRYGMGTA 233
Query: 305 ISEQFRSTAITSFFFK 320
I RS A T + K
Sbjct: 234 IE---RSAASTDYHKK 246
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF--SFYLTTIGEEAINIGSAAALSADDFI 184
+++ +K Y M+T++ M+ + +Q +F F G+EA +G A ++ D +
Sbjct: 54 LTRAEGLKYYRMMLTVRRMELKADQLYKQ-KFIRGFCHLCDGQEACCVGLEAGINPSDHV 112
Query: 185 LPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLP 244
+ YR GV RG +++ ++ + KG+ +H +K N+ + + Q P
Sbjct: 113 ITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGP 170
Query: 245 QAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTN 304
G+A + K + D + GDG ++G A N AA+ + P VFIC NN + + T+
Sbjct: 171 LGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTS 230
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 166 GEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHY 225
G+EA+ +G A + D I+ YR+ L RG TL + ++ + KG+ +H+
Sbjct: 102 GQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHF 161
Query: 226 GSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAV 285
K + + Q+P G+A+ K K ++ A GDG ++G ALN +A+
Sbjct: 162 YKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISAL 221
Query: 286 MEAPVVFICRNNGWAISTNISEQFRSTAITSFF 318
+ P + +C NN + + T +RS ++F
Sbjct: 222 WDLPAILVCENNHYGMGT---ATWRSAKSPAYF 251
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Query: 121 GSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS-FYLTTIGEEAINIGSAAALS 179
G + SKE +K Y M+ ++ + + G F IG+EA+ +G AL
Sbjct: 25 GGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALK 84
Query: 180 ADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPI 239
D ++ YR+ G +L G + + ++ + KG+ +H SK+ ++ +
Sbjct: 85 EGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIV 144
Query: 240 ATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
Q+ G+A++ + D ++AY GDG ++G + + N AA+ + PV++I NN +
Sbjct: 145 GAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRY 204
Query: 300 AISTNISEQFRSTAITSF 317
A+ T++S R++A T F
Sbjct: 205 AMGTSVS---RASAQTDF 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,494,067
Number of Sequences: 539616
Number of extensions: 4960219
Number of successful extensions: 13238
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 12816
Number of HSP's gapped (non-prelim): 432
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)