Query 020564
Match_columns 324
No_of_seqs 214 out of 576
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:53:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x5n_A SPRPN10, 26S proteasome 99.9 1.5E-24 5.2E-29 193.3 17.2 139 1-141 18-160 (192)
2 4b4t_W RPN10, 26S proteasome r 99.9 9E-24 3.1E-28 197.6 16.2 158 1-159 19-187 (268)
3 1z60_A TFIIH basal transcripti 99.9 1.8E-23 6E-28 152.3 0.2 59 243-311 1-59 (59)
4 3ibs_A Conserved hypothetical 99.7 1.4E-16 4.9E-21 140.9 17.2 151 2-160 28-209 (218)
5 1q0p_A Complement factor B; VO 99.6 8.3E-15 2.8E-19 129.6 13.2 159 3-162 28-217 (223)
6 1shu_X Anthrax toxin receptor 99.6 4.5E-14 1.5E-18 121.2 13.6 147 12-161 27-178 (182)
7 1ijb_A VON willebrand factor; 99.5 4E-13 1.4E-17 118.7 18.4 158 3-161 26-192 (202)
8 2b2x_A Integrin alpha-1; compu 99.5 9.4E-14 3.2E-18 124.2 14.2 153 8-161 38-208 (223)
9 1v7p_C Integrin alpha-2; snake 99.5 2.9E-13 9.9E-18 118.9 15.2 153 8-161 22-192 (200)
10 1n3y_A Integrin alpha-X; alpha 99.5 2.1E-14 7.1E-19 125.1 6.7 154 4-160 23-189 (198)
11 1rrk_A Complement factor B; BB 99.5 3.6E-13 1.2E-17 133.4 16.5 158 3-161 14-202 (497)
12 1atz_A VON willebrand factor; 99.5 1.4E-12 4.8E-17 113.4 17.7 152 3-157 18-177 (189)
13 4hqo_A Sporozoite surface prot 99.5 1E-12 3.5E-17 121.3 17.2 158 3-161 31-203 (266)
14 1mf7_A Integrin alpha M; cell 99.5 6.6E-14 2.3E-18 122.1 7.9 155 3-160 18-185 (194)
15 4hqf_A Thrombospondin-related 99.5 8.9E-13 3.1E-17 122.2 15.1 157 3-160 34-205 (281)
16 1pt6_A Integrin alpha-1; cell 99.5 8.1E-13 2.8E-17 117.1 13.9 151 8-159 23-191 (213)
17 4fx5_A VON willebrand factor t 99.4 3E-12 1E-16 127.9 18.1 149 5-161 94-254 (464)
18 1jey_B KU80; double-strand DNA 99.4 2.3E-12 8E-17 131.4 15.4 146 2-148 24-228 (565)
19 3n2n_F Anthrax toxin receptor 99.4 1.4E-12 4.8E-17 112.1 11.3 151 8-161 24-181 (185)
20 3hrz_D Complement factor B; se 99.3 7.8E-12 2.7E-16 129.6 14.9 158 3-161 256-444 (741)
21 2x31_A Magnesium-chelatase 60 99.3 1.3E-14 4.3E-19 126.0 -5.9 155 3-160 18-186 (189)
22 2odp_A Complement C2; C3/C5 co 99.3 8.8E-12 3E-16 124.1 13.3 158 3-161 22-210 (509)
23 2xgg_A Microneme protein 2; A/ 99.3 6.6E-11 2.3E-15 102.2 13.7 127 3-130 30-163 (178)
24 1mjn_A Integrin alpha-L; rossm 99.1 4.7E-11 1.6E-15 103.3 5.6 149 3-160 15-175 (179)
25 3zqk_A VON willebrand factor; 99.1 5.3E-10 1.8E-14 98.2 12.2 149 3-161 34-190 (199)
26 3k6s_A Integrin alpha-X; cell 99.0 8.8E-11 3E-15 128.1 4.4 152 3-157 143-307 (1095)
27 1jey_A KU70; double-strand DNA 99.0 3.6E-09 1.2E-13 108.9 14.3 126 3-129 55-208 (609)
28 3rag_A Uncharacterized protein 98.4 6.7E-07 2.3E-11 82.1 8.8 65 88-154 8-80 (242)
29 1yvr_A RO autoantigen, 60-kDa 98.2 3.5E-06 1.2E-10 85.2 9.0 125 6-144 388-538 (538)
30 2nvo_A RO sixty-related protei 98.0 3.4E-05 1.2E-09 78.1 12.1 126 5-145 386-535 (535)
31 2nut_A Protein transport prote 97.9 0.00015 5.3E-09 76.4 16.0 97 65-162 263-395 (769)
32 1pcx_A Protein transport prote 97.7 0.00083 2.8E-08 71.3 16.2 79 64-146 302-409 (810)
33 2ww8_A RRGA, cell WALL surface 97.5 0.00021 7.1E-09 76.6 9.0 90 6-97 246-386 (893)
34 1m2o_A SEC23, protein transpor 97.4 0.0043 1.5E-07 65.4 17.7 96 66-162 258-389 (768)
35 1m2v_B SEC24, protein transpor 97.4 0.002 6.7E-08 69.3 15.0 78 64-145 418-524 (926)
36 3eh1_A Protein transport prote 97.2 0.009 3.1E-07 62.8 16.7 78 65-146 268-373 (751)
37 2iue_A Pactolus I-domain; memb 96.9 0.031 1E-06 50.1 15.4 147 8-158 20-206 (212)
38 3rag_A Uncharacterized protein 96.7 0.0022 7.5E-08 58.7 6.4 75 6-82 149-226 (242)
39 3eh2_A Protein transport prote 96.5 0.039 1.3E-06 58.1 15.0 82 64-147 285-395 (766)
40 3efo_B SEC24 related gene fami 96.5 0.078 2.7E-06 55.9 17.1 82 64-147 289-399 (770)
41 3fcs_B Integrin beta-3; beta p 95.4 0.28 9.4E-06 51.1 15.4 139 8-149 128-334 (690)
42 3k6s_B Integrin beta-2; cell r 93.9 0.089 3E-06 54.8 7.1 139 8-151 121-326 (687)
43 1z2q_A LM5-1; membrane protein 92.5 0.11 3.8E-06 39.5 3.9 41 255-299 14-54 (84)
44 2yw8_A RUN and FYVE domain-con 92.0 0.11 3.7E-06 39.4 3.3 40 256-299 13-52 (82)
45 1x4u_A Zinc finger, FYVE domai 91.9 0.14 4.7E-06 38.9 3.8 40 256-299 8-47 (84)
46 2dlq_A GLI-kruppel family memb 91.4 0.14 4.7E-06 39.6 3.4 87 203-305 7-118 (124)
47 2yur_A Retinoblastoma-binding 91.3 0.3 1E-05 35.5 5.0 56 261-323 14-72 (74)
48 2djb_A Polycomb group ring fin 91.2 0.24 8.2E-06 35.7 4.3 55 261-322 14-68 (72)
49 3t7l_A Zinc finger FYVE domain 91.1 0.13 4.4E-06 39.7 2.9 40 256-299 14-53 (90)
50 1iym_A EL5; ring-H2 finger, ub 90.8 0.27 9.1E-06 33.2 4.1 47 262-312 5-51 (55)
51 1joc_A EEA1, early endosomal a 90.5 0.15 5.1E-06 41.8 2.9 35 261-299 68-102 (125)
52 2ect_A Ring finger protein 126 90.3 0.61 2.1E-05 33.8 5.9 57 261-322 14-70 (78)
53 2ecw_A Tripartite motif-contai 90.0 0.42 1.4E-05 34.9 4.8 53 261-321 18-76 (85)
54 2i13_A AART; DNA binding, zinc 89.8 0.068 2.3E-06 45.1 0.3 90 203-311 49-168 (190)
55 2dmd_A Zinc finger protein 64, 89.6 0.34 1.2E-05 35.7 4.1 73 216-306 7-88 (96)
56 3t3p_B Integrin beta-3; integr 89.6 14 0.00049 36.5 16.8 135 8-145 128-330 (472)
57 3lrq_A E3 ubiquitin-protein li 89.3 0.16 5.4E-06 39.4 2.0 52 263-321 23-75 (100)
58 3vi3_B Integrin beta-1; beta p 89.2 11 0.00038 37.2 15.6 136 7-149 138-341 (454)
59 2lt7_A Transcriptional regulat 89.1 0.26 9E-06 40.1 3.4 34 203-236 22-69 (133)
60 1x4j_A Ring finger protein 38; 88.4 0.46 1.6E-05 34.4 4.0 50 261-315 22-71 (75)
61 3ztg_A E3 ubiquitin-protein li 88.1 0.59 2E-05 35.0 4.5 47 261-314 12-60 (92)
62 2ecv_A Tripartite motif-contai 87.9 0.98 3.4E-05 32.8 5.6 54 261-322 18-77 (85)
63 6rxn_A Rubredoxin; electron tr 87.8 0.26 9E-06 33.5 2.1 24 203-226 4-39 (46)
64 2ee8_A Protein ODD-skipped-rel 87.8 0.27 9.3E-06 37.1 2.5 43 264-306 47-97 (106)
65 2dlq_A GLI-kruppel family memb 87.6 0.32 1.1E-05 37.5 2.8 78 216-312 6-102 (124)
66 1wg2_A Zinc finger (AN1-like) 86.9 0.53 1.8E-05 34.2 3.4 41 259-309 12-52 (64)
67 2i13_A AART; DNA binding, zinc 86.8 0.24 8.1E-06 41.6 1.8 84 203-305 77-184 (190)
68 1vfy_A Phosphatidylinositol-3- 86.5 0.44 1.5E-05 35.1 2.9 32 263-298 12-43 (73)
69 2ecm_A Ring finger and CHY zin 86.3 1 3.4E-05 30.2 4.5 48 262-313 5-52 (55)
70 4ap4_A E3 ubiquitin ligase RNF 86.3 0.13 4.4E-06 41.0 -0.2 91 205-317 36-126 (133)
71 2y43_A E3 ubiquitin-protein li 86.0 0.36 1.2E-05 36.9 2.3 50 263-319 23-72 (99)
72 1y02_A CARP2, FYVE-ring finger 85.5 0.34 1.1E-05 39.6 2.0 46 262-311 19-64 (120)
73 1wfk_A Zinc finger, FYVE domai 85.5 0.75 2.6E-05 35.2 3.9 47 261-311 8-61 (88)
74 1wff_A Riken cDNA 2810002D23 p 84.9 0.9 3.1E-05 34.8 3.9 40 261-309 24-63 (85)
75 2ep4_A Ring finger protein 24; 84.8 1.3 4.6E-05 31.6 4.8 49 261-314 14-62 (74)
76 2egp_A Tripartite motif-contai 84.7 0.93 3.2E-05 32.7 3.9 52 261-320 11-69 (79)
77 2kiz_A E3 ubiquitin-protein li 84.6 1 3.6E-05 31.7 4.1 49 261-314 13-61 (69)
78 1wfp_A Zinc finger (AN1-like) 84.5 0.86 3E-05 34.0 3.6 39 261-309 24-62 (74)
79 3pwf_A Rubrerythrin; non heme 84.0 0.44 1.5E-05 41.0 2.2 24 203-226 138-162 (170)
80 2kmk_A Zinc finger protein GFI 82.9 0.17 5.8E-06 36.1 -0.8 69 218-305 2-80 (82)
81 3zyq_A Hepatocyte growth facto 82.8 1.5 5.2E-05 39.1 5.3 33 263-299 165-197 (226)
82 3v4v_B Integrin beta-7; cell a 82.8 12 0.00042 37.4 12.2 137 7-150 148-354 (503)
83 3ng2_A RNF4, snurf, ring finge 82.6 0.62 2.1E-05 33.0 2.1 57 261-318 9-65 (71)
84 2yt9_A Zinc finger-containing 82.3 0.75 2.6E-05 33.7 2.6 43 264-306 37-90 (95)
85 1bor_A Transcription factor PM 82.0 2.2 7.5E-05 29.1 4.8 43 261-314 5-47 (56)
86 2v3b_B Rubredoxin 2, rubredoxi 81.9 0.7 2.4E-05 32.5 2.1 24 203-226 3-45 (55)
87 1dvp_A HRS, hepatocyte growth 81.8 0.93 3.2E-05 40.1 3.4 33 263-299 162-194 (220)
88 1chc_A Equine herpes virus-1 r 81.8 1.5 5.1E-05 30.7 3.9 47 262-315 5-51 (68)
89 1t1h_A Gspef-atpub14, armadill 81.5 1.2 4.2E-05 32.1 3.5 54 261-322 7-61 (78)
90 1lko_A Rubrerythrin all-iron(I 81.3 0.57 1.9E-05 40.9 1.8 24 203-226 155-180 (191)
91 1wfh_A Zinc finger (AN1-like) 81.2 1.4 4.8E-05 32.0 3.5 39 261-309 14-52 (64)
92 2kn9_A Rubredoxin; metalloprot 80.6 0.78 2.7E-05 34.9 2.1 24 203-226 27-69 (81)
93 2d8t_A Dactylidin, ring finger 80.5 0.67 2.3E-05 33.2 1.7 47 261-315 14-60 (71)
94 2ckl_A Polycomb group ring fin 80.2 0.85 2.9E-05 35.4 2.3 48 262-316 15-62 (108)
95 2ecy_A TNF receptor-associated 80.0 2 6.9E-05 30.0 4.1 49 261-317 14-63 (66)
96 2ea6_A Ring finger protein 4; 79.5 1.4 4.9E-05 30.7 3.2 52 261-313 14-65 (69)
97 1yk4_A Rubredoxin, RD; electro 79.3 0.94 3.2E-05 31.4 2.0 24 203-226 2-44 (52)
98 1jm7_A BRCA1, breast cancer ty 79.0 1.9 6.4E-05 33.3 4.0 50 263-320 22-74 (112)
99 2jp9_A Wilms tumor 1; DNA bind 78.9 0.63 2.2E-05 35.5 1.2 70 217-305 36-119 (119)
100 2ecj_A Tripartite motif-contai 78.8 2.2 7.5E-05 28.7 3.9 42 261-310 14-58 (58)
101 2csy_A Zinc finger protein 183 78.6 2 6.7E-05 31.4 3.8 47 261-315 14-60 (81)
102 1e4u_A Transcriptional repress 78.2 3.1 0.0001 30.8 4.8 52 261-316 10-62 (78)
103 2ysl_A Tripartite motif-contai 78.0 2.4 8.2E-05 30.0 4.0 49 261-317 19-70 (73)
104 2ysj_A Tripartite motif-contai 78.0 2.5 8.6E-05 29.1 4.0 42 261-310 19-63 (63)
105 2dmi_A Teashirt homolog 3; zin 77.7 2.1 7.3E-05 32.5 3.9 75 217-305 19-103 (115)
106 3vk6_A E3 ubiquitin-protein li 77.6 0.64 2.2E-05 36.8 0.8 44 264-314 3-47 (101)
107 4rxn_A Rubredoxin; electron tr 77.2 1.2 4.2E-05 31.2 2.1 24 203-226 3-45 (54)
108 2ct7_A Ring finger protein 31; 77.0 1.3 4.5E-05 33.5 2.4 39 264-304 27-68 (86)
109 1e8j_A Rubredoxin; iron-sulfur 76.9 1.6 5.3E-05 30.3 2.6 24 203-226 3-45 (52)
110 1jm7_B BARD1, BRCA1-associated 76.5 2.9 0.0001 32.8 4.5 50 262-320 22-71 (117)
111 2xeu_A Ring finger protein 4; 76.0 1.1 3.9E-05 30.7 1.7 57 262-319 3-59 (64)
112 1x4s_A Protein FON, zinc finge 75.9 0.78 2.7E-05 32.8 0.8 27 190-217 12-40 (59)
113 2csh_A Zinc finger protein 297 75.9 1.1 3.6E-05 34.0 1.6 41 264-304 39-87 (110)
114 1dx8_A Rubredoxin; electron tr 75.7 1.4 4.7E-05 32.5 2.2 24 203-226 7-49 (70)
115 4ayc_A E3 ubiquitin-protein li 75.5 0.96 3.3E-05 36.9 1.4 44 263-314 54-97 (138)
116 2l0b_A E3 ubiquitin-protein li 75.4 2 6.8E-05 32.3 3.1 49 261-314 39-87 (91)
117 1s24_A Rubredoxin 2; electron 74.8 1.4 4.8E-05 33.9 2.0 24 203-226 35-77 (87)
118 3h0g_I DNA-directed RNA polyme 74.2 6.1 0.00021 31.4 5.8 31 262-292 72-110 (113)
119 2yqq_A Zinc finger HIT domain- 74.2 0.92 3.2E-05 32.1 0.8 23 191-217 14-37 (56)
120 2ecl_A Ring-box protein 2; RNF 73.8 3 0.0001 30.7 3.7 53 261-313 14-73 (81)
121 1twf_I B12.6, DNA-directed RNA 73.2 2.5 8.4E-05 34.2 3.3 31 262-292 72-110 (122)
122 1yuz_A Nigerythrin; rubrythrin 72.7 1.7 5.7E-05 38.3 2.3 24 203-226 171-195 (202)
123 3fl2_A E3 ubiquitin-protein li 71.8 2.2 7.5E-05 33.8 2.6 45 263-315 53-98 (124)
124 1x4w_A Hypothetical protein FL 71.3 2.1 7.2E-05 31.3 2.2 40 261-309 14-55 (67)
125 3hct_A TNF receptor-associated 71.1 1.5 5.2E-05 34.6 1.5 49 261-317 17-66 (118)
126 3mpx_A FYVE, rhogef and PH dom 70.7 0.87 3E-05 43.8 0.0 53 256-312 369-428 (434)
127 3uk3_C Zinc finger protein 217 70.1 2.3 7.9E-05 27.8 2.1 33 203-235 4-50 (57)
128 2lv2_A Insulinoma-associated p 69.8 2.6 8.9E-05 31.6 2.5 34 203-236 28-75 (85)
129 4gzn_C ZFP-57, zinc finger pro 69.8 2.7 9.3E-05 29.3 2.5 34 203-236 4-51 (60)
130 2qip_A Protein of unknown func 69.4 5.6 0.00019 33.2 4.9 43 91-138 110-154 (165)
131 1wfl_A Zinc finger protein 216 69.0 3.5 0.00012 30.7 3.0 39 261-309 24-62 (74)
132 2ckl_B Ubiquitin ligase protei 69.0 1.8 6E-05 36.2 1.6 45 263-314 55-100 (165)
133 1ubd_C Protein (YY1 zinc finge 68.9 2.6 9E-05 32.2 2.5 33 203-235 5-52 (124)
134 1v87_A Deltex protein 2; ring- 68.9 3.4 0.00012 32.0 3.1 51 262-312 25-90 (114)
135 2rpc_A Zinc finger protein ZIC 68.7 2.8 9.5E-05 33.5 2.7 24 282-305 120-145 (155)
136 3l11_A E3 ubiquitin-protein li 68.7 1.8 6.2E-05 33.8 1.5 44 263-314 16-60 (115)
137 2ct2_A Tripartite motif protei 68.5 6.2 0.00021 28.7 4.4 50 261-314 14-66 (88)
138 2gli_A Protein (five-finger GL 66.5 7.3 0.00025 30.8 4.8 75 203-305 34-123 (155)
139 2vrw_B P95VAV, VAV1, proto-onc 66.4 2.5 8.4E-05 40.3 2.2 43 261-310 356-398 (406)
140 2ecg_A Baculoviral IAP repeat- 66.2 3.8 0.00013 29.6 2.7 42 263-316 26-68 (75)
141 1a1h_A QGSR zinc finger peptid 65.3 1.3 4.4E-05 31.9 -0.0 70 218-305 5-85 (90)
142 1g25_A CDK-activating kinase a 65.1 4.5 0.00015 28.0 2.9 55 262-320 3-59 (65)
143 2m0d_A Zinc finger and BTB dom 64.4 2.6 8.8E-05 23.2 1.2 25 282-306 3-27 (30)
144 2lcq_A Putative toxin VAPC6; P 64.3 3.9 0.00013 34.3 2.8 69 133-228 89-159 (165)
145 2m0e_A Zinc finger and BTB dom 64.1 1.5 5.1E-05 24.0 0.1 24 282-305 2-25 (29)
146 1rik_A E6APC1 peptide; E6-bind 64.0 2.4 8.3E-05 23.3 1.1 25 282-306 2-26 (29)
147 1tf6_A Protein (transcription 63.7 6.5 0.00022 32.5 4.1 90 203-309 42-166 (190)
148 1tf6_A Protein (transcription 63.7 7 0.00024 32.3 4.3 91 203-312 12-144 (190)
149 2lvu_A Zinc finger and BTB dom 67.5 1.5 5E-05 23.9 0.0 24 282-305 2-25 (26)
150 1znf_A 31ST zinc finger from X 63.5 2.9 0.0001 22.5 1.3 24 283-306 2-25 (27)
151 2el4_A Zinc finger protein 268 62.7 3.7 0.00013 25.6 1.9 25 282-306 12-36 (46)
152 2wbs_A Krueppel-like factor 4; 62.7 3.2 0.00011 29.7 1.7 69 219-305 7-88 (89)
153 2csz_A Synaptotagmin-like prot 62.6 5.3 0.00018 29.9 2.9 45 260-307 23-67 (76)
154 2ee8_A Protein ODD-skipped-rel 61.9 11 0.00038 27.7 4.8 34 203-236 17-64 (106)
155 2kvf_A Zinc finger and BTB dom 61.8 3.4 0.00012 22.5 1.4 25 282-306 3-27 (28)
156 1bbo_A Human enhancer-binding 61.8 4.2 0.00014 26.5 2.1 20 216-235 28-47 (57)
157 2jrp_A Putative cytoplasmic pr 61.5 3 0.0001 31.6 1.4 33 194-227 8-41 (81)
158 2pd2_A Hypothetical protein ST 61.3 12 0.0004 28.6 4.9 57 69-128 12-71 (108)
159 1x6e_A Zinc finger protein 24; 60.9 5.4 0.00018 27.6 2.6 34 203-236 14-61 (72)
160 1y7p_A Hypothetical protein AF 60.3 14 0.00049 33.0 5.8 50 74-129 133-182 (223)
161 2fc7_A ZZZ3 protein; structure 59.8 4.3 0.00015 30.6 2.0 31 262-298 21-56 (82)
162 2jmo_A Parkin; IBR, E3 ligase, 59.6 5.7 0.00019 29.5 2.7 42 262-307 25-73 (80)
163 3hcs_A TNF receptor-associated 59.4 3.4 0.00012 34.5 1.5 48 261-316 17-65 (170)
164 1twf_L ABC10-alpha, DNA-direct 59.0 5.6 0.00019 29.2 2.5 24 203-226 28-54 (70)
165 2gmg_A Hypothetical protein PF 58.1 5 0.00017 31.8 2.2 29 203-231 67-98 (105)
166 2ea5_A Cell growth regulator w 58.0 13 0.00044 26.4 4.3 43 261-315 14-57 (68)
167 2apo_B Ribosome biogenesis pro 57.6 5.8 0.0002 28.4 2.2 25 204-230 7-31 (60)
168 3mjh_B Early endosome antigen 57.5 3.8 0.00013 26.0 1.1 8 203-210 5-12 (34)
169 2epw_A Zinc finger protein 268 57.4 4.5 0.00015 25.2 1.5 24 282-305 12-35 (46)
170 3cw1_L U1 small nuclear ribonu 56.8 2.1 7.2E-05 32.2 -0.2 16 290-305 3-19 (77)
171 2e5r_A Dystrobrevin alpha; ZZ 56.8 7.2 0.00025 27.8 2.7 30 263-298 12-43 (63)
172 2gmg_A Hypothetical protein PF 56.4 6.2 0.00021 31.3 2.4 26 264-292 69-94 (105)
173 2kvg_A Zinc finger and BTB dom 56.3 3.8 0.00013 22.4 1.0 24 282-305 3-26 (27)
174 1x5w_A Zinc finger protein 64, 56.0 7.1 0.00024 26.7 2.6 34 203-236 9-56 (70)
175 2ytn_A Zinc finger protein 347 55.7 6.5 0.00022 24.4 2.1 25 282-306 12-36 (46)
176 2em0_A Zinc finger protein 224 55.5 5.4 0.00019 24.8 1.7 24 282-305 12-35 (46)
177 2eop_A Zinc finger protein 268 55.4 5.7 0.0002 24.6 1.8 24 282-305 12-35 (46)
178 2lvr_A Zinc finger and BTB dom 60.3 2.5 8.5E-05 23.4 0.0 24 282-305 3-26 (30)
179 2kvh_A Zinc finger and BTB dom 55.0 3.7 0.00013 22.3 0.8 24 282-305 3-26 (27)
180 2ctu_A Zinc finger protein 483 55.0 2.8 9.6E-05 28.6 0.2 10 203-212 18-27 (73)
181 2lvt_A Zinc finger and BTB dom 60.0 2.5 8.7E-05 23.3 0.0 25 282-306 2-26 (29)
182 1z6u_A NP95-like ring finger p 54.9 7.6 0.00026 32.1 3.0 47 263-317 79-126 (150)
183 1paa_A Yeast transcription fac 54.9 5.3 0.00018 22.0 1.4 24 283-306 3-27 (30)
184 2c2l_A CHIP, carboxy terminus 54.7 9.6 0.00033 33.7 3.8 53 262-322 208-261 (281)
185 2ema_A Zinc finger protein 347 54.7 5.1 0.00018 24.9 1.5 24 282-305 12-35 (46)
186 1twf_L ABC10-alpha, DNA-direct 54.6 9 0.00031 28.1 3.0 27 281-312 27-53 (70)
187 2m0f_A Zinc finger and BTB dom 54.0 2.4 8.3E-05 23.1 -0.2 24 282-305 2-25 (29)
188 2e72_A POGO transposable eleme 54.0 5 0.00017 27.4 1.3 14 279-292 9-22 (49)
189 2ecn_A Ring finger protein 141 53.6 3.7 0.00013 28.8 0.7 43 261-312 14-56 (70)
190 2em5_A ZFP-95, zinc finger pro 53.6 8.7 0.0003 23.9 2.5 24 282-305 12-35 (46)
191 2lce_A B-cell lymphoma 6 prote 53.3 6.2 0.00021 27.4 1.9 34 203-236 17-64 (74)
192 2gqj_A Zinc finger protein KIA 53.3 2.9 9.8E-05 31.3 0.0 37 203-239 24-78 (98)
193 2ytg_A ZFP-95, zinc finger pro 53.2 5.9 0.0002 24.7 1.6 24 282-305 12-35 (46)
194 1l1s_A Hypothetical protein MT 53.2 18 0.00063 27.8 4.8 57 69-128 17-76 (113)
195 3dpl_R Ring-box protein 1; ubi 53.2 2.1 7.1E-05 33.7 -0.8 52 262-313 37-98 (106)
196 2elz_A Zinc finger protein 224 53.1 6.3 0.00021 24.6 1.7 24 282-305 12-35 (46)
197 2el6_A Zinc finger protein 268 53.1 6 0.0002 24.7 1.6 24 282-305 12-35 (46)
198 1pft_A TFIIB, PFTFIIBN; N-term 53.0 3.4 0.00012 27.8 0.4 25 203-227 5-34 (50)
199 2yqq_A Zinc finger HIT domain- 52.7 7.6 0.00026 27.3 2.2 37 262-309 12-48 (56)
200 2eq0_A Zinc finger protein 347 52.6 6.9 0.00024 24.3 1.9 25 282-306 12-36 (46)
201 2ctd_A Zinc finger protein 512 52.5 10 0.00035 28.4 3.1 34 203-236 34-81 (96)
202 2epz_A Zinc finger protein 28 52.5 6.7 0.00023 24.4 1.8 24 282-305 12-35 (46)
203 2ene_A Zinc finger protein 347 52.3 9.7 0.00033 23.6 2.6 25 282-306 12-36 (46)
204 2kfq_A FP1; protein, de novo p 52.3 2.9 9.9E-05 24.2 -0.1 24 283-306 3-26 (32)
205 2ep0_A Zinc finger protein 28 52.0 7.5 0.00026 24.1 2.0 25 282-306 12-36 (46)
206 1jzt_A Hypothetical 27.5 kDa p 52.0 28 0.00096 31.2 6.5 70 73-144 36-116 (246)
207 2ytq_A Zinc finger protein 268 51.9 8.7 0.0003 23.9 2.3 24 282-305 12-35 (46)
208 1jx7_A Hypothetical protein YC 51.7 22 0.00075 27.0 5.1 63 65-130 13-84 (117)
209 1p7a_A BF3, BKLF, kruppel-like 51.5 6 0.00021 23.2 1.4 24 282-305 11-34 (37)
210 1x4s_A Protein FON, zinc finge 51.3 8.6 0.00029 27.4 2.3 33 261-301 10-45 (59)
211 2jp9_A Wilms tumor 1; DNA bind 51.3 2.5 8.4E-05 32.0 -0.6 77 217-312 6-104 (119)
212 2elv_A Zinc finger protein 406 51.2 6.2 0.00021 23.0 1.4 25 282-306 9-33 (36)
213 2em9_A Zinc finger protein 224 51.2 6.7 0.00023 24.3 1.6 24 282-305 12-35 (46)
214 2ebt_A Krueppel-like factor 5; 51.0 4 0.00014 29.8 0.5 66 221-305 21-98 (100)
215 2en1_A Zinc finger protein 224 51.0 5.4 0.00018 24.8 1.1 24 282-305 12-35 (46)
216 1srk_A Zinc finger protein ZFP 50.8 5.3 0.00018 23.1 1.0 25 282-306 7-31 (35)
217 2eoe_A Zinc finger protein 347 50.5 5.9 0.0002 24.6 1.3 24 282-305 12-35 (46)
218 3j21_g 50S ribosomal protein L 50.4 10 0.00035 26.2 2.5 24 203-226 14-37 (51)
219 2ysp_A Zinc finger protein 224 50.3 6.4 0.00022 24.4 1.4 25 282-306 12-36 (46)
220 2o8n_A APOA-I binding protein; 50.2 27 0.00093 31.8 6.1 70 73-144 59-136 (265)
221 2cot_A Zinc finger protein 435 50.2 7.7 0.00026 27.1 2.0 34 203-236 18-65 (77)
222 1x5w_A Zinc finger protein 64, 50.1 8 0.00027 26.4 2.0 22 282-303 37-58 (70)
223 2en8_A Zinc finger protein 224 50.0 9.6 0.00033 23.5 2.2 24 282-305 12-35 (46)
224 1rmd_A RAG1; V(D)J recombinati 49.7 8.1 0.00028 30.0 2.2 47 262-316 23-70 (116)
225 2d9h_A Zinc finger protein 692 49.4 10 0.00035 26.4 2.5 38 203-240 7-63 (78)
226 2adr_A ADR1; transcription reg 49.0 7.8 0.00027 25.5 1.7 42 264-305 4-54 (60)
227 2vje_B MDM4 protein; proto-onc 48.7 4.8 0.00016 28.2 0.6 48 262-315 7-55 (63)
228 2ely_A Zinc finger protein 224 48.7 5.7 0.00019 24.8 0.9 24 282-305 12-35 (46)
229 2em7_A Zinc finger protein 224 48.7 7.7 0.00026 24.1 1.6 24 282-305 12-35 (46)
230 2els_A Zinc finger protein 406 48.6 3.6 0.00012 24.2 -0.1 24 282-305 9-32 (36)
231 3d3k_A Enhancer of mRNA-decapp 48.3 31 0.0011 31.1 6.2 53 90-144 86-143 (259)
232 2eml_A Zinc finger protein 28 48.2 7.3 0.00025 24.2 1.4 24 282-305 12-35 (46)
233 2eme_A Zinc finger protein 473 47.9 7.8 0.00027 24.0 1.5 24 282-305 12-35 (46)
234 2drp_A Protein (tramtrack DNA- 47.8 11 0.00038 25.2 2.5 33 203-235 10-58 (66)
235 1zbd_B Rabphilin-3A; G protein 47.3 9.9 0.00034 31.2 2.4 38 261-301 54-91 (134)
236 2ytr_A Zinc finger protein 347 47.2 7.8 0.00027 24.0 1.4 24 282-305 12-35 (46)
237 2ytd_A Zinc finger protein 473 47.2 4.9 0.00017 25.0 0.4 24 282-305 12-35 (46)
238 1llm_C Chimera of ZIF23-GCN4; 47.0 11 0.00038 27.0 2.5 37 203-239 3-55 (88)
239 2epr_A POZ-, at HOOK-, and zin 46.9 7.7 0.00026 24.5 1.4 24 282-305 12-35 (48)
240 1x4v_A Hypothetical protein LO 46.4 15 0.0005 26.4 2.9 39 261-309 11-51 (63)
241 2dlk_A Novel protein; ZF-C2H2 46.4 5.9 0.0002 27.6 0.8 55 220-292 12-78 (79)
242 2emf_A Zinc finger protein 484 46.3 10 0.00035 23.5 1.9 24 282-305 12-35 (46)
243 2zet_C Melanophilin; complex, 46.2 8.3 0.00028 32.4 1.8 37 261-300 67-103 (153)
244 2y1n_A E3 ubiquitin-protein li 45.7 7.2 0.00025 37.7 1.6 46 263-316 333-379 (389)
245 1ard_A Yeast transcription fac 45.3 11 0.00036 20.3 1.7 19 217-235 2-20 (29)
246 2ep2_A Zinc finger protein 484 44.7 10 0.00036 23.4 1.8 24 282-305 12-35 (46)
247 2eoq_A Zinc finger protein 224 44.4 7.6 0.00026 24.1 1.0 24 282-305 12-35 (46)
248 2emk_A Zinc finger protein 28 44.4 5.7 0.00019 24.8 0.4 24 282-305 12-35 (46)
249 1z60_A TFIIH basal transcripti 44.3 5.9 0.0002 28.1 0.5 18 197-214 24-41 (59)
250 1njq_A Superman protein; zinc- 44.3 8.4 0.00029 23.0 1.2 25 282-306 6-30 (39)
251 2dmd_A Zinc finger protein 64, 44.2 14 0.00048 26.5 2.7 33 203-235 36-82 (96)
252 2kre_A Ubiquitin conjugation f 44.1 23 0.00077 27.2 3.9 54 261-322 28-81 (100)
253 2enc_A Zinc finger protein 224 44.1 8.3 0.00028 23.9 1.2 24 282-305 12-35 (46)
254 3ky9_A Proto-oncogene VAV; cal 44.0 11 0.00036 38.0 2.5 43 262-311 529-571 (587)
255 1wik_A Thioredoxin-like protei 43.9 84 0.0029 23.6 7.3 51 91-141 16-67 (109)
256 2jne_A Hypothetical protein YF 43.3 6.5 0.00022 30.8 0.6 34 193-227 37-71 (101)
257 2elq_A Zinc finger protein 406 43.3 6.9 0.00023 22.8 0.7 25 282-306 9-33 (36)
258 1klr_A Zinc finger Y-chromosom 43.2 13 0.00046 19.9 1.9 20 217-236 2-21 (30)
259 2emy_A Zinc finger protein 268 43.2 6.2 0.00021 24.5 0.4 24 282-305 12-35 (46)
260 1vd4_A Transcription initiatio 43.1 8.2 0.00028 26.2 1.1 27 203-229 14-51 (62)
261 1wjp_A Zinc finger protein 295 43.0 5.2 0.00018 29.9 0.1 25 282-306 69-94 (107)
262 2wbt_A B-129; zinc finger; 2.7 43.0 17 0.00057 27.9 3.1 34 203-236 74-119 (129)
263 2ytk_A Zinc finger protein 347 42.9 6.5 0.00022 24.4 0.5 24 282-305 12-35 (46)
264 2ab3_A ZNF29; zinc finger prot 42.5 6.7 0.00023 21.2 0.5 24 282-305 2-27 (29)
265 2ytj_A Zinc finger protein 484 42.3 9.1 0.00031 23.7 1.2 24 282-305 12-35 (46)
266 2aus_D NOP10, ribosome biogene 42.3 11 0.00038 26.9 1.7 25 204-230 6-30 (60)
267 2eos_A B-cell lymphoma 6 prote 42.3 12 0.00041 22.6 1.7 25 282-306 11-35 (42)
268 1tot_A CREB-binding protein; z 42.0 7.5 0.00026 26.7 0.7 30 262-298 6-36 (52)
269 2epx_A Zinc finger protein 28 41.6 13 0.00045 22.9 1.9 24 282-305 12-36 (47)
270 4ap4_A E3 ubiquitin ligase RNF 41.6 11 0.00036 29.4 1.7 54 262-316 7-60 (133)
271 2elx_A Zinc finger protein 406 41.4 7.7 0.00026 22.2 0.7 25 282-306 7-31 (35)
272 2emm_A ZFP-95, zinc finger pro 41.2 6.8 0.00023 24.3 0.4 24 282-305 12-35 (46)
273 2elt_A Zinc finger protein 406 41.1 5.7 0.00019 23.1 0.0 24 282-305 9-32 (36)
274 2kr4_A Ubiquitin conjugation f 41.1 19 0.00063 26.6 2.9 52 261-320 13-64 (85)
275 1nj3_A NPL4; NZF domain, rubre 41.0 21 0.00071 21.5 2.6 25 203-227 6-30 (31)
276 2elr_A Zinc finger protein 406 41.0 5.1 0.00017 23.3 -0.2 24 282-305 9-32 (36)
277 2eq4_A Zinc finger protein 224 40.9 11 0.00037 23.3 1.4 24 282-305 12-35 (46)
278 2amj_A Modulator of drug activ 40.6 18 0.00062 31.0 3.2 43 86-128 9-57 (204)
279 2enf_A Zinc finger protein 347 40.3 11 0.00037 23.3 1.3 25 282-306 12-36 (46)
280 2enh_A Zinc finger protein 28 40.1 12 0.0004 23.2 1.5 25 282-306 12-36 (46)
281 3fni_A Putative diflavin flavo 40.0 36 0.0012 27.8 4.9 40 88-128 3-43 (159)
282 1q0q_A 1-deoxy-D-xylulose 5-ph 39.9 1.1E+02 0.0038 29.6 8.8 61 92-157 11-74 (406)
283 3ju3_A Probable 2-oxoacid ferr 39.6 31 0.0011 27.1 4.2 64 91-158 15-84 (118)
284 4a0k_B E3 ubiquitin-protein li 39.4 2.2 7.5E-05 34.4 -2.7 51 262-312 48-108 (117)
285 2ept_A Zinc finger protein 32; 39.1 16 0.00056 21.8 2.0 25 282-306 10-34 (41)
286 2iu4_A DHA-DHAQ, dihydroxyacet 39.1 33 0.0011 32.5 4.9 37 90-130 95-134 (336)
287 3fro_A GLGA glycogen synthase; 39.0 1E+02 0.0034 27.9 8.3 70 91-160 252-331 (439)
288 2yts_A Zinc finger protein 484 38.9 12 0.00042 23.0 1.4 25 282-306 12-36 (46)
289 2ytb_A Zinc finger protein 32; 38.8 11 0.00036 22.7 1.1 25 282-306 11-35 (42)
290 2yu4_A E3 SUMO-protein ligase 38.5 12 0.0004 28.2 1.5 44 262-312 7-58 (94)
291 1wfe_A Riken cDNA 2310008M20 p 38.5 19 0.00066 27.3 2.7 39 261-309 24-64 (86)
292 3mvn_A UDP-N-acetylmuramate:L- 38.2 68 0.0023 26.2 6.4 73 90-163 64-138 (163)
293 2rpc_A Zinc finger protein ZIC 38.2 23 0.00078 28.0 3.2 85 216-312 24-130 (155)
294 1wim_A KIAA0161 protein; ring 38.0 8.8 0.0003 28.7 0.7 47 262-313 5-61 (94)
295 1rim_A E6APC2 peptide; E6-bind 37.8 16 0.00055 20.9 1.7 20 217-236 2-21 (33)
296 2emg_A Zinc finger protein 484 37.8 12 0.00041 23.1 1.2 25 282-306 12-36 (46)
297 3iuf_A Zinc finger protein UBI 37.7 12 0.00041 23.9 1.2 25 282-306 7-32 (48)
298 2eoy_A Zinc finger protein 473 37.6 18 0.00063 22.2 2.1 25 282-306 12-36 (46)
299 2dip_A Zinc finger SWIM domain 37.6 12 0.00041 29.1 1.4 29 262-296 31-61 (98)
300 2kdx_A HYPA, hydrogenase/ureas 37.5 18 0.00061 28.7 2.5 24 203-226 73-99 (119)
301 2emi_A Zinc finger protein 484 37.3 11 0.00039 23.2 1.0 25 282-306 12-36 (46)
302 2ytf_A Zinc finger protein 268 37.3 13 0.00043 22.9 1.3 25 282-306 12-36 (46)
303 2yt9_A Zinc finger-containing 37.3 19 0.00064 25.8 2.4 51 262-312 7-73 (95)
304 2epu_A Zinc finger protein 32; 37.1 11 0.00037 23.3 0.9 25 282-306 12-36 (45)
305 4ic3_A E3 ubiquitin-protein li 37.0 13 0.00043 26.7 1.4 41 263-315 25-66 (74)
306 2vje_A E3 ubiquitin-protein li 36.9 14 0.00049 25.7 1.6 48 262-315 8-56 (64)
307 2jun_A Midline-1; B-BOX, TRIM, 36.9 13 0.00045 28.0 1.5 36 262-302 3-38 (101)
308 3qhp_A Type 1 capsular polysac 36.8 51 0.0017 25.8 5.2 66 92-159 4-74 (166)
309 2em6_A Zinc finger protein 224 36.7 13 0.00045 22.9 1.3 25 282-306 12-36 (46)
310 1qxf_A GR2, 30S ribosomal prot 36.6 12 0.00042 27.1 1.2 27 205-231 9-40 (66)
311 1f2i_G Fusion of N-terminal 17 36.6 21 0.00071 24.3 2.4 33 203-235 19-67 (73)
312 2yu5_A Zinc finger protein 473 36.5 12 0.0004 22.9 1.0 25 282-306 12-36 (44)
313 2epv_A Zinc finger protein 268 36.3 12 0.0004 23.0 1.0 25 282-306 12-36 (44)
314 2emx_A Zinc finger protein 268 36.2 9.8 0.00034 23.3 0.6 24 282-305 10-33 (44)
315 2eof_A Zinc finger protein 268 36.0 10 0.00034 23.1 0.6 25 282-306 12-36 (44)
316 2ytm_A Zinc finger protein 28 35.6 5.7 0.0002 24.8 -0.7 23 282-304 12-34 (46)
317 2elm_A Zinc finger protein 406 35.1 11 0.00037 22.3 0.6 24 282-305 9-33 (37)
318 2eon_A ZFP-95, zinc finger pro 35.1 15 0.00052 22.7 1.4 25 282-306 12-36 (46)
319 2ytt_A Zinc finger protein 473 35.1 9.1 0.00031 23.8 0.3 24 282-305 12-35 (46)
320 1sp2_A SP1F2; zinc finger, tra 35.0 15 0.00051 20.4 1.2 24 283-306 3-28 (31)
321 4grd_A N5-CAIR mutase, phospho 34.8 93 0.0032 26.6 6.6 78 86-165 9-93 (173)
322 2emb_A Zinc finger protein 473 34.6 13 0.00046 22.6 1.0 25 282-306 12-36 (44)
323 3t6o_A Sulfate transporter/ant 34.5 98 0.0034 23.6 6.4 51 88-141 47-101 (121)
324 2eoj_A Zinc finger protein 268 34.5 12 0.0004 22.8 0.7 25 282-306 12-36 (44)
325 2yrj_A Zinc finger protein 473 34.4 16 0.00054 22.4 1.4 25 282-306 12-36 (46)
326 2epq_A POZ-, at HOOK-, and zin 34.3 15 0.00052 22.5 1.3 24 282-305 10-33 (45)
327 1wd2_A Ariadne-1 protein homol 34.1 29 0.00098 24.3 2.8 35 262-298 6-42 (60)
328 2epc_A Zinc finger protein 32; 34.1 12 0.0004 22.5 0.7 25 282-306 11-35 (42)
329 2yti_A Zinc finger protein 347 34.1 13 0.00046 22.9 1.0 25 282-306 12-36 (46)
330 1wys_A Riken cDNA 2310008M20 p 34.0 31 0.0011 25.5 3.1 38 262-309 14-53 (75)
331 2ytp_A Zinc finger protein 484 33.9 16 0.00056 22.5 1.4 25 282-306 12-36 (46)
332 2kdx_A HYPA, hydrogenase/ureas 33.9 25 0.00085 27.8 2.8 27 281-313 72-99 (119)
333 2eq1_A Zinc finger protein 347 33.7 18 0.00061 22.2 1.6 25 282-306 12-36 (46)
334 1zfd_A SWI5; DNA binding motif 33.7 15 0.00051 20.5 1.1 25 282-306 3-29 (32)
335 1x6h_A Transcriptional repress 33.6 31 0.001 24.0 3.0 19 218-236 16-34 (86)
336 2yth_A Zinc finger protein 224 33.6 14 0.00048 22.8 1.0 25 282-306 12-36 (46)
337 2lt7_A Transcriptional regulat 33.6 21 0.00071 28.4 2.3 34 203-236 50-97 (133)
338 1ubd_C Protein (YY1 zinc finge 33.3 22 0.00076 26.8 2.4 77 217-312 5-102 (124)
339 3knv_A TNF receptor-associated 33.2 8.1 0.00028 31.6 -0.3 44 261-312 30-74 (141)
340 1wgm_A Ubiquitin conjugation f 33.2 39 0.0013 25.7 3.7 52 261-320 21-73 (98)
341 2ej4_A Zinc finger protein ZIC 33.0 21 0.0007 25.6 2.0 57 219-305 27-85 (95)
342 2eoo_A ZFP-95, zinc finger pro 33.0 23 0.00078 21.8 2.0 23 282-304 12-34 (46)
343 2el5_A Zinc finger protein 268 32.9 15 0.00051 22.1 1.0 25 282-306 10-34 (42)
344 2kln_A Probable sulphate-trans 32.9 1.1E+02 0.0037 23.6 6.5 41 90-130 49-92 (130)
345 2lcq_A Putative toxin VAPC6; P 32.9 16 0.00053 30.5 1.4 10 264-273 134-143 (165)
346 2emh_A Zinc finger protein 484 32.7 21 0.00072 21.9 1.8 23 282-304 12-34 (46)
347 2lv2_A Insulinoma-associated p 32.7 20 0.00068 26.6 1.9 42 264-305 30-80 (85)
348 2f5t_X Archaeal transcriptiona 32.4 82 0.0028 27.9 6.3 54 69-129 7-60 (233)
349 2ep3_A Zinc finger protein 484 32.4 18 0.00062 22.2 1.4 25 282-306 12-36 (46)
350 2emp_A Zinc finger protein 347 32.4 23 0.00079 21.7 1.9 24 282-305 12-35 (46)
351 2em2_A Zinc finger protein 28 32.2 12 0.00041 23.2 0.5 24 282-305 12-35 (46)
352 2yu8_A Zinc finger protein 347 32.2 26 0.00088 21.5 2.1 24 282-305 12-35 (46)
353 2em8_A Zinc finger protein 224 32.1 24 0.00081 21.7 1.9 24 282-305 12-35 (46)
354 4ayb_P DNA-directed RNA polyme 32.1 21 0.00072 24.2 1.7 26 203-228 3-34 (48)
355 3qmx_A Glutaredoxin A, glutare 32.1 65 0.0022 24.0 4.8 36 107-142 29-64 (99)
356 2eq2_A Zinc finger protein 347 32.0 13 0.00046 22.9 0.7 25 282-306 12-36 (46)
357 3au8_A 1-deoxy-D-xylulose 5-ph 32.0 1.2E+02 0.0041 30.0 7.7 60 93-157 80-145 (488)
358 2en7_A Zinc finger protein 268 31.9 16 0.00055 22.1 1.1 25 282-306 12-36 (44)
359 2yso_A ZFP-95, zinc finger pro 31.8 23 0.00079 21.7 1.9 24 282-305 12-35 (46)
360 2iuy_A Avigt4, glycosyltransfe 31.4 1.1E+02 0.0037 27.0 7.0 70 90-161 162-233 (342)
361 1mio_B Nitrogenase molybdenum 31.3 2.8E+02 0.0097 26.5 10.5 89 90-185 313-416 (458)
362 1wg2_A Zinc finger (AN1-like) 31.2 20 0.00069 25.8 1.6 21 193-215 20-40 (64)
363 3hr4_A Nitric oxide synthase, 30.9 48 0.0016 29.2 4.4 58 69-128 21-78 (219)
364 2eq3_A Zinc finger protein 347 30.9 14 0.00049 22.7 0.7 25 282-306 12-36 (46)
365 3tem_A Ribosyldihydronicotinam 30.8 59 0.002 28.3 5.0 39 90-128 2-42 (228)
366 2ep1_A Zinc finger protein 484 30.6 14 0.00049 22.6 0.7 25 282-306 12-36 (46)
367 2yte_A Zinc finger protein 473 30.4 23 0.00079 21.1 1.6 21 216-236 9-29 (42)
368 3k1y_A Oxidoreductase; structu 30.3 68 0.0023 27.2 5.2 41 89-129 11-59 (191)
369 2en2_A B-cell lymphoma 6 prote 30.3 9.9 0.00034 22.9 -0.2 24 282-305 11-34 (42)
370 2elp_A Zinc finger protein 406 30.1 21 0.00073 20.6 1.4 19 217-235 9-28 (37)
371 3ct4_A PTS-dependent dihydroxy 30.0 50 0.0017 31.2 4.6 36 90-129 99-137 (332)
372 3ghf_A Septum site-determining 29.7 2E+02 0.007 22.5 8.4 77 43-141 19-96 (120)
373 3f6r_A Flavodoxin; FMN binding 29.4 46 0.0016 26.2 3.7 37 91-128 3-40 (148)
374 2lqo_A Putative glutaredoxin R 29.4 75 0.0026 23.7 4.7 38 106-143 16-53 (92)
375 1ble_A Fructose permease; phos 29.3 1.1E+02 0.0039 25.5 6.3 65 54-128 43-107 (163)
376 3j20_W 30S ribosomal protein S 29.2 20 0.00068 25.8 1.3 26 205-230 17-47 (63)
377 2y1e_A 1-deoxy-D-xylulose 5-ph 29.0 1.7E+02 0.0058 28.2 8.1 58 93-155 24-85 (398)
378 2en6_A Zinc finger protein 268 29.0 27 0.00094 21.3 1.9 24 282-305 12-35 (46)
379 2ent_A Krueppel-like factor 15 28.9 28 0.00096 21.4 1.9 25 282-306 12-38 (48)
380 3rss_A Putative uncharacterize 28.8 99 0.0034 30.6 6.7 90 54-145 12-110 (502)
381 2en3_A ZFP-95, zinc finger pro 28.8 12 0.00042 23.0 0.1 24 282-305 12-35 (46)
382 1wfh_A Zinc finger (AN1-like) 28.7 24 0.00082 25.4 1.6 21 193-215 20-40 (64)
383 2ct1_A Transcriptional repress 28.4 29 0.001 23.9 2.1 22 283-304 46-67 (77)
384 1oi2_A Hypothetical protein YC 28.3 55 0.0019 31.3 4.5 36 90-129 107-145 (366)
385 3ny7_A YCHM protein, sulfate t 28.0 1.5E+02 0.0051 22.6 6.4 65 64-131 23-90 (118)
386 2eoh_A Zinc finger protein 28 28.0 16 0.00053 22.6 0.5 25 282-306 12-36 (46)
387 2eps_A POZ-, at HOOK-, and zin 27.9 39 0.0013 21.7 2.6 31 282-312 12-49 (54)
388 3b08_B Ranbp-type and C3HC4-ty 27.7 26 0.0009 25.2 1.7 28 203-230 8-35 (64)
389 3k1l_B Fancl; UBC, ring, RWD, 27.7 70 0.0024 30.7 5.1 51 261-313 307-370 (381)
390 3ic4_A Glutaredoxin (GRX-1); s 27.6 1.6E+02 0.0055 20.7 6.8 52 107-158 25-91 (92)
391 2bfw_A GLGA glycogen synthase; 27.5 2.1E+02 0.0072 22.7 7.7 69 91-159 37-115 (200)
392 2em3_A Zinc finger protein 28 27.5 13 0.00044 22.9 0.0 25 282-306 12-36 (46)
393 3lfj_A Manxb, phosphotransfera 27.4 94 0.0032 26.8 5.5 44 75-128 84-127 (187)
394 3zxn_A RSBS, anti-sigma-factor 27.4 86 0.0029 24.4 5.0 43 89-131 43-88 (123)
395 2ct0_A Non-SMC element 1 homol 27.3 55 0.0019 23.8 3.5 45 262-313 15-61 (74)
396 3iz6_X 40S ribosomal protein S 27.2 32 0.0011 26.2 2.1 27 204-230 37-68 (86)
397 2elo_A Zinc finger protein 406 27.1 23 0.00079 20.4 1.2 19 217-235 9-27 (37)
398 2f9f_A First mannosyl transfer 27.0 1.6E+02 0.0056 23.4 6.9 70 90-161 23-99 (177)
399 2q9u_A A-type flavoprotein; fl 27.0 1.2E+02 0.0041 28.1 6.8 39 89-128 256-295 (414)
400 1f4p_A Flavodoxin; electron tr 26.9 52 0.0018 25.8 3.6 36 91-127 2-38 (147)
401 3u50_C Telomerase-associated p 26.8 20 0.00069 30.7 1.1 29 264-297 44-72 (172)
402 1ydg_A Trp repressor binding p 26.5 51 0.0018 27.6 3.7 39 90-129 7-46 (211)
403 2a5l_A Trp repressor binding p 26.5 46 0.0016 27.4 3.4 39 90-129 6-45 (200)
404 3lp6_A Phosphoribosylaminoimid 26.2 1.7E+02 0.0058 25.0 6.8 75 89-165 7-88 (174)
405 2zjr_Z 50S ribosomal protein L 26.2 27 0.00094 24.7 1.5 21 203-225 30-51 (60)
406 2gli_A Protein (five-finger GL 26.0 61 0.0021 25.2 3.9 71 216-304 66-152 (155)
407 2eow_A Zinc finger protein 347 25.9 14 0.00048 22.7 -0.0 25 282-306 12-36 (46)
408 1wfp_A Zinc finger (AN1-like) 25.8 28 0.00097 25.8 1.6 21 193-215 30-50 (74)
409 1fv5_A First zinc finger of U- 25.8 25 0.00085 21.8 1.1 22 215-236 6-27 (36)
410 3mc3_A DSRE/DSRF-like family p 25.7 77 0.0026 25.1 4.4 57 67-128 29-98 (134)
411 2emj_A Zinc finger protein 28 25.6 15 0.0005 22.7 0.0 24 282-305 12-35 (46)
412 1n57_A Chaperone HSP31, protei 25.5 73 0.0025 28.9 4.8 42 87-128 46-99 (291)
413 3f2b_A DNA-directed DNA polyme 25.5 33 0.0011 37.3 2.7 26 203-228 502-538 (1041)
414 2yho_A E3 ubiquitin-protein li 25.3 19 0.00065 26.3 0.6 40 263-314 19-59 (79)
415 2xdq_A Light-independent proto 25.0 2E+02 0.0068 27.5 8.1 87 90-183 318-416 (460)
416 4dgh_A Sulfate permease family 24.8 2.3E+02 0.008 21.6 8.2 42 90-131 50-94 (130)
417 3llo_A Prestin; STAS domain, c 24.7 1.9E+02 0.0065 22.5 6.7 42 89-130 64-108 (143)
418 3u5c_b RP61, YS20, 40S ribosom 24.5 33 0.0011 25.9 1.8 26 205-230 36-66 (82)
419 1pq4_A Periplasmic binding pro 24.5 96 0.0033 28.0 5.4 44 103-146 222-265 (291)
420 2i5o_A DNA polymerase ETA; zin 24.4 28 0.00097 22.5 1.2 11 203-213 9-19 (39)
421 1qyp_A RNA polymerase II; tran 24.4 31 0.0011 23.6 1.5 31 262-292 15-53 (57)
422 2ka5_A Putative anti-sigma fac 24.2 2E+02 0.0068 22.0 6.6 50 89-141 52-104 (125)
423 2qzs_A Glycogen synthase; glyc 24.2 2.2E+02 0.0077 26.4 8.1 72 90-161 292-368 (485)
424 3a9j_C Mitogen-activated prote 24.1 52 0.0018 20.1 2.4 24 203-226 8-31 (34)
425 3nw0_A Non-structural maintena 24.0 43 0.0015 29.8 2.8 43 263-312 181-225 (238)
426 1dl6_A Transcription factor II 23.9 30 0.001 24.0 1.4 25 204-228 12-41 (58)
427 1umd_B E1-beta, 2-OXO acid deh 23.9 1.2E+02 0.0041 27.7 6.0 41 106-146 216-260 (324)
428 2eov_A Zinc finger protein 484 23.9 36 0.0012 20.6 1.7 21 216-236 11-31 (46)
429 3zyw_A Glutaredoxin-3; metal b 23.7 1.9E+02 0.0065 21.9 6.3 50 91-142 17-69 (111)
430 3mkr_B Coatomer subunit alpha; 23.7 34 0.0012 32.1 2.1 29 203-231 278-308 (320)
431 1rzu_A Glycogen synthase 1; gl 23.7 2.4E+02 0.0081 26.2 8.2 71 91-161 292-367 (485)
432 2epp_A POZ-, at HOOK-, and zin 23.6 17 0.00059 25.8 0.1 26 281-306 12-37 (66)
433 2em4_A Zinc finger protein 28 23.5 17 0.00057 22.5 -0.0 24 282-305 12-35 (46)
434 3cx3_A Lipoprotein; zinc-bindi 23.4 1E+02 0.0035 27.6 5.3 44 103-146 211-254 (284)
435 2q62_A ARSH; alpha/beta, flavo 23.3 1.1E+02 0.0036 27.2 5.3 40 89-128 34-75 (247)
436 2xzm_6 RPS27E; ribosome, trans 23.2 28 0.00097 26.2 1.2 26 205-230 34-64 (81)
437 1xmp_A PURE, phosphoribosylami 23.2 1.3E+02 0.0043 25.7 5.4 77 87-165 9-92 (170)
438 4gnr_A ABC transporter substra 23.0 1.7E+02 0.0058 25.9 6.7 63 43-118 12-74 (353)
439 3o70_A PHD finger protein 13; 23.0 42 0.0014 24.0 2.1 61 238-311 2-65 (68)
440 3h0g_L DNA-directed RNA polyme 22.9 43 0.0015 24.0 2.0 25 203-227 21-48 (63)
441 4e08_A DJ-1 beta; flavodoxin-l 22.8 1.2E+02 0.004 25.1 5.2 39 88-128 4-42 (190)
442 3mv2_A Coatomer subunit alpha; 22.8 35 0.0012 32.1 2.0 41 191-231 271-317 (325)
443 1vsq_C Mannose-specific phosph 22.7 99 0.0034 26.0 4.7 64 55-128 46-109 (165)
444 3d3j_A Enhancer of mRNA-decapp 22.7 72 0.0025 29.4 4.2 53 90-144 133-190 (306)
445 1yui_A GAGA-factor; complex (D 22.7 17 0.00059 23.5 -0.1 24 282-305 24-47 (54)
446 3gi1_A LBP, laminin-binding pr 22.7 1.7E+02 0.0057 26.3 6.6 44 103-146 213-256 (286)
447 2eou_A Zinc finger protein 473 22.6 39 0.0013 20.4 1.7 21 216-236 11-31 (44)
448 2q5c_A NTRC family transcripti 22.5 1.1E+02 0.0038 26.0 5.1 58 104-161 80-139 (196)
449 3oow_A Phosphoribosylaminoimid 22.5 1.8E+02 0.0063 24.6 6.3 74 90-165 6-86 (166)
450 3hly_A Flavodoxin-like domain; 22.3 74 0.0025 25.8 3.8 37 91-128 2-39 (161)
451 3jyw_9 60S ribosomal protein L 22.1 42 0.0014 24.7 1.9 26 203-228 26-55 (72)
452 4gi5_A Quinone reductase; prot 22.0 1.2E+02 0.004 27.6 5.4 38 91-128 24-63 (280)
453 3u7r_A NADPH-dependent FMN red 22.0 77 0.0026 26.9 4.0 39 89-127 2-41 (190)
454 2yto_A Zinc finger protein 484 21.8 33 0.0011 21.0 1.2 20 217-236 12-31 (46)
455 1xvl_A Mn transporter, MNTC pr 21.6 1.4E+02 0.0048 27.5 6.0 43 103-145 238-280 (321)
456 3t6p_A Baculoviral IAP repeat- 21.5 48 0.0016 31.3 2.7 42 262-315 295-337 (345)
457 1w85_B Pyruvate dehydrogenase 21.5 1.6E+02 0.0053 26.9 6.2 41 106-146 215-259 (324)
458 1nrz_A PTS system, sorbose-spe 21.5 1E+02 0.0035 25.9 4.5 64 55-128 43-106 (164)
459 3na7_A HP0958; flagellar bioge 21.4 18 0.0006 32.5 -0.4 31 262-292 198-232 (256)
460 3ipz_A Monothiol glutaredoxin- 21.3 2.2E+02 0.0077 21.2 6.2 51 91-142 19-71 (109)
461 2crc_A Ubiquitin conjugating e 21.1 32 0.0011 23.7 1.0 26 203-228 10-35 (52)
462 3trh_A Phosphoribosylaminoimid 21.1 1.9E+02 0.0066 24.5 6.2 74 90-165 7-87 (169)
463 3n05_A NH(3)-dependent NAD(+) 21.1 3.7E+02 0.013 26.6 9.4 88 5-128 303-391 (590)
464 2d1p_A TUSD, hypothetical UPF0 21.1 2.8E+02 0.0097 22.2 7.1 61 64-129 23-95 (140)
465 2yan_A Glutaredoxin-3; oxidore 21.0 2.1E+02 0.0071 21.0 5.9 51 91-141 18-69 (105)
466 3b6i_A Flavoprotein WRBA; flav 21.0 73 0.0025 26.1 3.5 38 91-129 3-42 (198)
467 2xoc_A E3 ubiquitin-protein li 20.9 39 0.0013 30.8 1.9 47 263-312 80-131 (261)
468 2lk0_A RNA-binding protein 5; 20.9 74 0.0025 19.3 2.6 24 203-226 5-28 (32)
469 2d9g_A YY1-associated factor 2 20.8 70 0.0024 21.9 2.7 27 203-229 11-37 (53)
470 3cc2_Z 50S ribosomal protein L 20.7 31 0.0011 27.7 1.0 26 203-228 60-89 (116)
471 1t9b_A Acetolactate synthase, 20.7 1.8E+02 0.006 29.7 7.0 81 69-161 518-623 (677)
472 3hh8_A Metal ABC transporter s 20.7 1.5E+02 0.0051 26.9 5.9 43 103-145 217-259 (294)
473 1vq8_Z 50S ribosomal protein L 20.7 28 0.00096 26.2 0.7 26 203-228 27-56 (83)
474 2en9_A Zinc finger protein 28 20.6 46 0.0016 20.3 1.7 21 216-236 11-31 (46)
475 3eye_A PTS system N-acetylgala 20.4 1.6E+02 0.0055 24.8 5.5 43 75-128 69-111 (168)
476 2lri_C Autoimmune regulator; Z 20.3 1.3E+02 0.0044 21.3 4.2 49 261-317 11-63 (66)
477 1l1o_C Replication protein A 7 20.3 32 0.0011 29.2 1.1 26 264-292 45-72 (181)
478 1th8_B Anti-sigma F factor ant 20.3 1.3E+02 0.0043 22.2 4.5 42 90-131 44-88 (116)
479 3ot1_A 4-methyl-5(B-hydroxyeth 20.2 1.3E+02 0.0045 25.4 5.1 42 85-128 5-46 (208)
480 4gim_A Pseudouridine-5'-phosph 20.1 68 0.0023 30.3 3.4 30 109-144 277-308 (335)
481 2j7j_A Transcription factor II 20.1 62 0.0021 22.1 2.5 20 216-235 30-51 (85)
482 2emz_A ZFP-95, zinc finger pro 20.1 48 0.0016 20.2 1.7 21 216-236 11-31 (46)
483 3kkl_A Probable chaperone prot 20.0 98 0.0033 27.3 4.3 40 90-129 4-53 (244)
No 1
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1.5e-24 Score=193.31 Aligned_cols=139 Identities=15% Similarity=0.271 Sum_probs=125.3
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 1 MDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 1 ~D~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+||.||||+++++++..|+++|+++||.+++|||+|+++.+++++|+|.|++.+.+.|+++ .+.|+++|++||++|...
T Consensus 18 ~D~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~~~~plT~d~~~i~~~L~~l-~~~g~t~l~~aL~~A~~~ 96 (192)
T 2x5n_A 18 GDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDL-PVRGNAKFGDGIQIAQLA 96 (192)
T ss_dssp TTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCCEEEEEESCHHHHHHHHTTC-CCCSCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcEEecCCCCCHHHHHHHHHcC-CCCCCchHHHHHHHHHHH
Confidence 5999999999999999999999999999999999998657999999999999999999985 677889999999999999
Q ss_pred hhCCCCCCCc-eEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchH---HHHHHHHHhhC
Q 020564 81 LSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM---FICKHLCQDTG 141 (324)
Q Consensus 81 L~~~p~~~~r-eILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~---~iLk~ia~~Tg 141 (324)
|++.+.+..+ |||||++++.+.|++++.++++.+|++||+|++|++|.+. . |+++++.++
T Consensus 97 l~~~~~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n 160 (192)
T 2x5n_A 97 LKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN 160 (192)
T ss_dssp HHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC
T ss_pred HHhccccCCCceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc
Confidence 9998765544 5777776666778899999999999999999999999875 6 999999976
No 2
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9e-24 Score=197.58 Aligned_cols=158 Identities=13% Similarity=0.180 Sum_probs=137.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 1 MDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 1 ~D~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+||+||||++++++++.|++.++++||.++||||+|++..++++.|+|.|..+++.+|+++ ++.|.|+|++||++|+..
T Consensus 19 ~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~vl~plT~D~~~il~aL~~l-~~~G~T~l~~gL~~A~~a 97 (268)
T 4b4t_W 19 GDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDT-QIEGKLHMATALQIAQLT 97 (268)
T ss_dssp TTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEEEEEEESCHHHHHHHHTTC-CCCSCCCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcceeccCCcchHHHHHHHhhhc-CcCCCCChHHHHHHHHHH
Confidence 5999999999999999999999999999999999998878899999999999999999986 789999999999999999
Q ss_pred hhCCCCCCCc-eEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch---HHHHHHHHHhhCC-----eeEEeCCHH
Q 020564 81 LSQIPSYGHR-EVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE---MFICKHLCQDTGG-----SYSVALDES 151 (324)
Q Consensus 81 L~~~p~~~~r-eILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae---~~iLk~ia~~TgG-----~Y~va~d~~ 151 (324)
|++.+.+..+ +||+|++|+.+.|.+++.++++.++|+||+|+||+||.+ ...|+++++..|| .|++..-+.
T Consensus 98 Lk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~~~~~s~~v~v~~g 177 (268)
T 4b4t_W 98 LKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVTPG 177 (268)
T ss_dssp HHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSSTTTSCEEEEECCC
T ss_pred HHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCCCCCceeEEEeCCC
Confidence 9999776654 677777888888999999999999999999999999964 4689999999876 455544332
Q ss_pred --HHHHHHHh
Q 020564 152 --HFKELIME 159 (324)
Q Consensus 152 --hl~~lL~~ 159 (324)
.|.+.|..
T Consensus 178 ~~~lsd~l~~ 187 (268)
T 4b4t_W 178 PRLLYENIAS 187 (268)
T ss_dssp SSCHHHHHHT
T ss_pred CccHHHHHhc
Confidence 35555543
No 3
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=99.86 E-value=1.8e-23 Score=152.32 Aligned_cols=59 Identities=36% Similarity=0.975 Sum_probs=49.6
Q ss_pred CCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCC
Q 020564 243 IAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 311 (324)
Q Consensus 243 ~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~ 311 (324)
|++|+|++++ ....++.||||+++|++ +++|+|++|+++||+|||+||||+||+||||+
T Consensus 1 l~~f~Ev~~~-----~~~~~~~C~~C~~~~~~-----~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 1 LDAFQEIPLE-----EYNGERFCYGCQGELKD-----QHVYVCAVCQNVFCVDCDVFVHDSLHSCPGCI 59 (59)
T ss_dssp CCSCCEEEHH-----HHCSCCEETTTTEECTT-----SEEECCTTTTCCBCHHHHHTTTTTSCSSSTTC
T ss_pred CCCccccCcc-----ccCCCCcccccCcccCC-----CccEECCccCcCcccchhHHHHhhccCCcCCC
Confidence 5799999753 22335689999999963 24799999999999999999999999999995
No 4
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.4e-16 Score=140.94 Aligned_cols=151 Identities=19% Similarity=0.267 Sum_probs=124.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcC---CCCcchHHHHHHHHH
Q 020564 2 DFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLG---CSGDSSLQNALDLVQ 78 (324)
Q Consensus 2 D~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~---~~G~~sL~naL~~A~ 78 (324)
|+.|+|++.+++.+..|++. .|.+++|||+|. +.++.+.|++.|...+.+.|..+.. +.|.|.|+.||..|.
T Consensus 28 d~~~~r~~~ak~~~~~~~~~----~~~~~v~lv~F~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~g~T~l~~al~~a~ 102 (218)
T 3ibs_A 28 DVQPSRLEKAKRLISRLVDE----LDNDKVGMIVFA-GDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLAT 102 (218)
T ss_dssp SSSSCHHHHHHHHHHHHHHT----CSSCEEEEEEES-SSEEEEEEEESCHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHHHh----CCCCeEEEEEEC-CCceEeCCCCCCHHHHHHHHHhcCcccCCCCCCcHHHHHHHHH
Confidence 67899999999999999977 468999999995 7799999999999998888876532 478899999999999
Q ss_pred HHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch---------------------------HH
Q 020564 79 GLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE---------------------------MF 131 (324)
Q Consensus 79 ~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae---------------------------~~ 131 (324)
..|...+ ..+++|||++.... +.+++.++++.+++.+|+|++||+|.+ ..
T Consensus 103 ~~l~~~~--~~~~~ivllTDG~~-~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 179 (218)
T 3ibs_A 103 RSFTPQE--GVGRAIIVITDGEN-HEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEG 179 (218)
T ss_dssp TTSCSCS--SCCEEEEEEECCTT-CCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHH
T ss_pred HHHhhCC--CCCcEEEEEcCCCC-CCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHH
Confidence 9988763 34567777764433 333788999999999999999999963 57
Q ss_pred HHHHHHHhhCCeeEEeCC-HHHHHHHHHhc
Q 020564 132 ICKHLCQDTGGSYSVALD-ESHFKELIMEH 160 (324)
Q Consensus 132 iLk~ia~~TgG~Y~va~d-~~hl~~lL~~~ 160 (324)
.|++||+.|||.|+.+.+ .+.+..++..+
T Consensus 180 ~L~~iA~~~gG~~~~~~~~~~~~~~~~~~i 209 (218)
T 3ibs_A 180 MCQEIAKDGKGIYVRVDNSNSAQKAISQEI 209 (218)
T ss_dssp HHHHHHHHTEEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEECCCChHHHHHHHHHH
Confidence 899999999999999888 66777776654
No 5
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.60 E-value=8.3e-15 Score=129.56 Aligned_cols=159 Identities=15% Similarity=0.153 Sum_probs=115.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEee----cCCCCHHHHHHHHhhhcC----CCCcchHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKALMGKLG----CSGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~----~lt~n~~~~~~~L~~~~~----~~G~~sL~naL 74 (324)
+..++++.+++.+..|++.+-..++.+++|||.|. +.++.+. +.+.|...+.++|..+.. ..|.|.++.||
T Consensus 28 M~~~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~g~T~~~~aL 106 (223)
T 1q0p_A 28 IGASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYA-TYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKAL 106 (223)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEec-CccceeeccccCCCCCHHHHHHHHHhcccccccCCCCccHHHHH
Confidence 44567899999999999988777888999999995 6678887 666788888899987642 36899999999
Q ss_pred HHHHHHhhCCCC------CCCceEEEEEeCCCCC---CcccHHHHHHH----------HHhcCcEEEEEEccc--hHHHH
Q 020564 75 DLVQGLLSQIPS------YGHREVLILYSALSTC---DPGDIMETIQK----------CKESKIRCSVIGLSA--EMFIC 133 (324)
Q Consensus 75 ~~A~~~L~~~p~------~~~reILil~gS~~t~---d~g~i~~ti~~----------akk~~IrV~vI~Lga--e~~iL 133 (324)
..|...|..... ...+++|||++..... ||.++.+.++. +++.+|+|++||+|. +...|
T Consensus 107 ~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L 186 (223)
T 1q0p_A 107 QAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNI 186 (223)
T ss_dssp HHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHH
T ss_pred HHHHHHhhccccccccccccCCeEEEEECCCCCCCCCChHHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHH
Confidence 999999986532 2456788888755443 45555555533 467899999999996 46899
Q ss_pred HHHHHhhCC--eeEEeCCHHHHHHHHHhcCC
Q 020564 134 KHLCQDTGG--SYSVALDESHFKELIMEHAP 162 (324)
Q Consensus 134 k~ia~~TgG--~Y~va~d~~hl~~lL~~~~~ 162 (324)
++||..||| .|+.+.|.+.|.+++.+++.
T Consensus 187 ~~iA~~~~G~~~~~~~~~~~~L~~~~~~i~~ 217 (223)
T 1q0p_A 187 NALASKKDNEQHVFKVKDMENLEDVFYQMID 217 (223)
T ss_dssp HHHSCCCTTCCCEEETTC-------------
T ss_pred HHHhcCCCCCceEEEcCCHHHHHHHHHHHhc
Confidence 999999999 89999999999999988763
No 6
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=99.55 E-value=4.5e-14 Score=121.23 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhc--CCCCcchHHHHHHHHHHHhhCCCCCCC
Q 020564 12 AKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL--GCSGDSSLQNALDLVQGLLSQIPSYGH 89 (324)
Q Consensus 12 ~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~--~~~G~~sL~naL~~A~~~L~~~p~~~~ 89 (324)
++.+..++..++ +|.+++|||.| ++.++.+.|++.+...+.+.|..+. .+.|+|.++.||..|...|...+....
T Consensus 27 ~~~~~~~~~~~~--~~~~~v~lv~f-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~ 103 (182)
T 1shu_X 27 YNFVQQLAERFV--SPEMRLSFIVF-SSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKT 103 (182)
T ss_dssp HHHHHHHHHHCC--CTTEEEEEEEE-SSSEEEEEEEECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHHhc--CCCceEEEEEe-CCCceEEECCCCCHHHHHHHHHhcccCCCCCCchHHHHHHHHHHHHHhccCCCC
Confidence 444555555553 38999999999 5778999999999998888887653 367899999999999999976533345
Q ss_pred ceEEEEEeCCCCCCcc--cHHHHHHHHHhcCcEEEEEEccc-hHHHHHHHHHhhCCeeEEeCCHHHHHHHHHhcC
Q 020564 90 REVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALDESHFKELIMEHA 161 (324)
Q Consensus 90 reILil~gS~~t~d~g--~i~~ti~~akk~~IrV~vI~Lga-e~~iLk~ia~~TgG~Y~va~d~~hl~~lL~~~~ 161 (324)
+++||+++.....+.. .+.++++.+++.+|+|++||+|. +...|+++|..|||.|++..|.+.|.+++.++.
T Consensus 104 ~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ia~~~~~~~~~~~~~~~L~~~~~~i~ 178 (182)
T 1shu_X 104 SSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSIL 178 (182)
T ss_dssp CEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHSSSGGGEEESSSTTHHHHHHHHHHH
T ss_pred CeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHHHhCCCCceEEccCCHHHHHHHHHHHH
Confidence 6778887644432221 34568899999999999999984 467899999999999999989889998887654
No 7
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=99.54 E-value=4e-13 Score=118.67 Aligned_cols=158 Identities=10% Similarity=0.067 Sum_probs=122.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQG 79 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt--~n~~~~~~~L~~~~~~~G-~~sL~naL~~A~~ 79 (324)
+.+++++.+++.+..|++.+-...+.+|+|||.|. +.+....+++ .|...+.++|+++....| .|.++.||..|+.
T Consensus 26 m~~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~i~~l~~~gg~~T~~~~aL~~a~~ 104 (202)
T 1ijb_A 26 LSEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYH-DGSHAYIGLKDRKRPSELRRIASQVKYAGSQVASTSEVLKYTLF 104 (202)
T ss_dssp SCHHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEES-SSEEEEECTTCCCCHHHHHHHHHTCCCCCBSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCceEEEEEEEC-CCceEEEecCCCCCHHHHHHHHHhCcCCCCCcCcHHHHHHHHHH
Confidence 45678999999999999876433457899999995 6788889998 788888888887643344 4999999999986
Q ss_pred HhhC-CCCCCCceEEEEEeCCCCCC--cccHHHHHHHHHhcCcEEEEEEccc--hHHHHHHHHHh-hCCeeEEeCCHHHH
Q 020564 80 LLSQ-IPSYGHREVLILYSALSTCD--PGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQD-TGGSYSVALDESHF 153 (324)
Q Consensus 80 ~L~~-~p~~~~reILil~gS~~t~d--~g~i~~ti~~akk~~IrV~vI~Lga--e~~iLk~ia~~-TgG~Y~va~d~~hl 153 (324)
.+.. ......+++|||++.....+ +.++.+.++.+++.||+|++||+|. +...|++||.. ++|.++.+.|.+.|
T Consensus 105 ~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~L 184 (202)
T 1ijb_A 105 QIFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSSVDEL 184 (202)
T ss_dssp HTSSSCSCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHHHCTTCCCEEESSGGGH
T ss_pred HHhccCCCCCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhCCCCcccEEEeCCHHHH
Confidence 6532 21224567888887554432 3478889999999999999999996 46899999996 57888999999988
Q ss_pred HHHHHhcC
Q 020564 154 KELIMEHA 161 (324)
Q Consensus 154 ~~lL~~~~ 161 (324)
.+++.++.
T Consensus 185 ~~~~~~i~ 192 (202)
T 1ijb_A 185 EQQRDEIV 192 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 8
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.53 E-value=9.4e-14 Score=124.21 Aligned_cols=153 Identities=14% Similarity=0.158 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHhhCC
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLLSQI 84 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt--~n~~~~~~~L~~~~~~~G-~~sL~naL~~A~~~L~~~ 84 (324)
++.+++.+..|++.+-..++.+++|||+| ++.+..+.|++ .+..+++++|..+....| .|.++.||+.|...+...
T Consensus 38 ~~~~k~~~~~~~~~l~~~~~~~rv~lv~F-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~gG~~T~~~~aL~~a~~~l~~~ 116 (223)
T 2b2x_A 38 WESVIAFLNDLLKRMDIGPKQTQVGIVQY-GENVTHEFNLNKYSSTEEVLVAANKIVQRGGRQTMTALGIDTARKEAFTE 116 (223)
T ss_dssp HHHHHHHHHHHHTTSCCSTTSCCEEEEEE-SSSEEEEECTTTCCSHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTTSSG
T ss_pred HHHHHHHHHHHHHhcccCCCCeEEEEEEe-CCCccEEEecCCCCCHHHHHHHHHhhhccCCCCccHHHHHHHHHHHhcCc
Confidence 56677777777766544578999999999 47788899985 355677777776532345 599999999999875331
Q ss_pred ---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch-----------HHHHHHHHHh-hCCeeEEeCC
Q 020564 85 ---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-----------MFICKHLCQD-TGGSYSVALD 149 (324)
Q Consensus 85 ---p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae-----------~~iLk~ia~~-TgG~Y~va~d 149 (324)
.....+++||+++.....+..++.++++.+++.||+|++||+|.+ ...|++||.. |||.|+.+.|
T Consensus 117 ~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~~~~~~L~~iA~~p~~g~~~~~~~ 196 (223)
T 2b2x_A 117 ARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSD 196 (223)
T ss_dssp GGTCCTTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGGC---CCCHHHHHHHHTTSCSSGGGTEEEESS
T ss_pred ccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCccccccccchhHHHHHHHHhCCCchhcEEEeCC
Confidence 123456788888866555665778899999999999999999864 3789999999 9999999999
Q ss_pred HHHHHHHHHhcC
Q 020564 150 ESHFKELIMEHA 161 (324)
Q Consensus 150 ~~hl~~lL~~~~ 161 (324)
.+.|.+++.++.
T Consensus 197 ~~~L~~i~~~i~ 208 (223)
T 2b2x_A 197 ELALVTIVKALG 208 (223)
T ss_dssp TTGGGGGHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887776654
No 9
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=99.51 E-value=2.9e-13 Score=118.90 Aligned_cols=153 Identities=16% Similarity=0.133 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHhhC-
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLLSQ- 83 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt--~n~~~~~~~L~~~~~~~G-~~sL~naL~~A~~~L~~- 83 (324)
++.+++.+..|++.+-..++..|+|||.|. +.+....|++ .+..+++++|.++....| .|.++.||+.|...+..
T Consensus 22 ~~~~k~~~~~~~~~l~~~~~~~rvglv~f~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~~G~~T~~~~al~~a~~~~~~~ 100 (200)
T 1v7p_C 22 WDAVKNFLEKFVQGLDIGPTKTQVGLIQYA-NNPRVVFNLNTYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSA 100 (200)
T ss_dssp HHHHHHHHHHHHHTSCBSTTSEEEEEEEES-SSEEEEECTTTCSSHHHHHHHHHHCCCCCCSCCCHHHHHHHHHHHTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEEEEC-CCceEEEeCCCcCCHHHHHHHHHhhhccCCCCCcHHHHHHHHHHhhccc
Confidence 667777888888775444578999999995 7789999998 467778888886533345 69999999999997432
Q ss_pred C--CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc-----h------HHHHHHHHHhhCCee-EEeCC
Q 020564 84 I--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA-----E------MFICKHLCQDTGGSY-SVALD 149 (324)
Q Consensus 84 ~--p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga-----e------~~iLk~ia~~TgG~Y-~va~d 149 (324)
. .....+++||+++.....|+.++.++++.+++.+|+|++||+|. + ...|++||..|||.| +.+.|
T Consensus 101 ~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~~~~~~~~~~~L~~iA~~~~g~~~~~~~~ 180 (200)
T 1v7p_C 101 ASGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSD 180 (200)
T ss_dssp GGTCCTTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred ccCCCCCCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecccccccccchhhHHHHHHHHhCCccHhcEEEcCC
Confidence 1 11245678888876655566667789999999999999999953 1 356999999999987 77889
Q ss_pred HHHHHHHHHhcC
Q 020564 150 ESHFKELIMEHA 161 (324)
Q Consensus 150 ~~hl~~lL~~~~ 161 (324)
.+.|.+++..+.
T Consensus 181 ~~~l~~i~~~i~ 192 (200)
T 1v7p_C 181 EAALLEKAGTLG 192 (200)
T ss_dssp SGGGHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888876653
No 10
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.50 E-value=2.1e-14 Score=125.14 Aligned_cols=154 Identities=14% Similarity=0.106 Sum_probs=115.2
Q ss_pred CCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCH--HHHHHHHhhhcCCCCcchHHHHHHHHHHHh
Q 020564 4 RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGCSGDSSLQNALDLVQGLL 81 (324)
Q Consensus 4 ~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~--~~~~~~L~~~~~~~G~~sL~naL~~A~~~L 81 (324)
....+..+++.+..|++.+. ++.+++|||+|. +.+....|++... ..+.++|..+....|.|.++.||..|+..|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~--~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~g~T~~~~al~~a~~~l 99 (198)
T 1n3y_A 23 SSRNFATMMNFVRAVISQFQ--RPSTQFSLMQFS-NKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRL 99 (198)
T ss_dssp CHHHHHHHHHHHHHHHTTSC--TTTEEEEEEEES-SSEEEEECHHHHHHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHhcC--CCCcEEEEEEeC-CCccEEEecCccCCHHHHHHHHhcCcCCCCCchHHHHHHHHHHHH
Confidence 33456777888888887764 899999999995 6678888884311 234444544333578999999999999665
Q ss_pred -hCC--CCCCCceEEEEEeCCCCC-CcccHHHHHHHHHhcCcEEEEEEccchH------HHHHHHHHhhCCee-EEeCCH
Q 020564 82 -SQI--PSYGHREVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDTGGSY-SVALDE 150 (324)
Q Consensus 82 -~~~--p~~~~reILil~gS~~t~-d~g~i~~ti~~akk~~IrV~vI~Lgae~------~iLk~ia~~TgG~Y-~va~d~ 150 (324)
... .....+++||+++..... |+.+..++++.+++.+|+|++||+|.+. ..|++||..|||.| +.+.|.
T Consensus 100 ~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~ 179 (198)
T 1n3y_A 100 FHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDF 179 (198)
T ss_dssp TSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSG
T ss_pred hCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCH
Confidence 321 112356788888754443 6667788999999999999999999865 89999999999998 888888
Q ss_pred HHHHHHHHhc
Q 020564 151 SHFKELIMEH 160 (324)
Q Consensus 151 ~hl~~lL~~~ 160 (324)
+.|.+++.++
T Consensus 180 ~~l~~~~~~i 189 (198)
T 1n3y_A 180 DALKDIQNQL 189 (198)
T ss_dssp GGGGGGHHHH
T ss_pred HHHHHHHHHH
Confidence 8887776654
No 11
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.50 E-value=3.6e-13 Score=133.41 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=127.6
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEee----cCCCCHHHHHHHHhhhcC----CCCcchHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT----DLGGSPESHIKALMGKLG----CSGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~----~lt~n~~~~~~~L~~~~~----~~G~~sL~naL 74 (324)
+..+|++.+++.+..|++.+-..++.+++|||+|. +.++.+. +++.|.+.+.++|.++.. ..|.|.++.||
T Consensus 14 M~~~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al 92 (497)
T 1rrk_A 14 IGASNFTGAKKVLVNLIEKVASYGVKPRYGLVTYA-TYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKAL 92 (497)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-SSEEEEECTTSGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhhccCCCceEEEEEec-CCceEeeccccccccCHHHHHHHHHhCcCccccccCccCHHHHH
Confidence 44579999999999999998778889999999995 7788888 778889999999987642 45789999999
Q ss_pred HHHHHHhhCCCC------CCCceEEEEEeCCCCCCcccHHHHHHHHHhc-------------CcEEEEEEccc--hHHHH
Q 020564 75 DLVQGLLSQIPS------YGHREVLILYSALSTCDPGDIMETIQKCKES-------------KIRCSVIGLSA--EMFIC 133 (324)
Q Consensus 75 ~~A~~~L~~~p~------~~~reILil~gS~~t~d~g~i~~ti~~akk~-------------~IrV~vI~Lga--e~~iL 133 (324)
..|...|..... ...+++|||++.....+..+...+++.+++. +|+|++||+|. +...|
T Consensus 93 ~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L 172 (497)
T 1rrk_A 93 QAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNI 172 (497)
T ss_dssp HHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHH
T ss_pred HHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHHHHHHHhhhhcccccchhcCeeEEEecCCCccCHHHH
Confidence 999999964322 2345788888755444333555566666555 99999999996 46899
Q ss_pred HHHHHhhCC--eeEEeCCHHHHHHHHHhcC
Q 020564 134 KHLCQDTGG--SYSVALDESHFKELIMEHA 161 (324)
Q Consensus 134 k~ia~~TgG--~Y~va~d~~hl~~lL~~~~ 161 (324)
++||..+|| .|+.+.|.+.|.+++.+.+
T Consensus 173 ~~iA~~~~g~~~~~~~~~~~~l~~~~~~~i 202 (497)
T 1rrk_A 173 NALASKKDNEQHVCKVKDMECLEDVFYQMI 202 (497)
T ss_dssp HHHSCCCTTCCCEEETTCHHHHHHHHHHHS
T ss_pred HHHhcCCCCcceEEEeCCHHHHhhhhhhcc
Confidence 999999999 9999999999999998765
No 12
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=99.49 E-value=1.4e-12 Score=113.37 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=118.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecC--CCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDL--GGSPESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~l--t~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+.++|++.+++.+..|++.+-......++|||.| ++.+....|+ +.|.+.+.++|..+....|.|.++.||..|...
T Consensus 18 m~~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~~~ 96 (189)
T 1atz_A 18 FPASYFDEMKSFAKAFISKANIGPRLTQVSVLQY-GSITTIDVPWNVVPEKAHLLSLVDVMQREGGPSQIGDALGFAVRY 96 (189)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEE-SSSEEEEECTTCCCCHHHHHHHHHTCCCCCCCCCHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEE-CCcceEEEecCCCCCHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 4578999999999999988633344589999999 5778999999 889999999998764456889999999999999
Q ss_pred hhCCC---CCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhhCCee-EEeCCHHHHH
Q 020564 81 LSQIP---SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDTGGSY-SVALDESHFK 154 (324)
Q Consensus 81 L~~~p---~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~TgG~Y-~va~d~~hl~ 154 (324)
|.... ....++++|++.+.... .++.++++.+++.||+|++||+|.+ ...|++||..++|.| +...+.+.|.
T Consensus 97 l~~~~~g~r~~~~~~vivltdg~~~--~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~~~ 174 (189)
T 1atz_A 97 LTSEMHGARPGASKAVVILVTDVSV--DSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAGPAGDSNVVKLQRIEDLP 174 (189)
T ss_dssp HHSCCTTCCTTSEEEEEEEECSCCS--SCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTGGGGGGGCEEESSTTHHH
T ss_pred HhccccCCCCCCCcEEEEEeCCCCC--chHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHCCCcccCEEEecChhhHH
Confidence 87631 12345655555433332 3467889999999999999999964 679999999998865 6677777777
Q ss_pred HHH
Q 020564 155 ELI 157 (324)
Q Consensus 155 ~lL 157 (324)
.+.
T Consensus 175 ~l~ 177 (189)
T 1atz_A 175 TMV 177 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 13
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=99.48 E-value=1e-12 Score=121.32 Aligned_cols=158 Identities=15% Similarity=0.111 Sum_probs=128.0
Q ss_pred CCCcHH-HHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCC----HHHHHHHHhhhc---CCCCcchHHHHH
Q 020564 3 FRPSRM-AVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHIKALMGKL---GCSGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl-~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n----~~~~~~~L~~~~---~~~G~~sL~naL 74 (324)
+.++.+ ..+++.+..|++.+-..++..++|||.|. +.+..+.+++.. ...++++|+++. ...|.|.++.||
T Consensus 31 M~~~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs-~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL 109 (266)
T 4hqo_A 31 IGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFG-SYTTELIRLGSGQSIDKRQALSKVTELRKTYTPYGTTSMTAAL 109 (266)
T ss_dssp TCHHHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEES-SSEEEEECTTSHHHHCHHHHHHHHHHHHHHCCCCSCCCHHHHH
T ss_pred cChhHHHHHHHHHHHHHHHHcccCCCCcEEEEEEec-CCcceEEecCCCCccCHHHHHHHHHHhhhccCCCCCCCHHHHH
Confidence 344566 47888999999988666789999999995 678889999864 677788887764 578899999999
Q ss_pred HHHHHHhhCC-CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhh--CC--eeEEe
Q 020564 75 DLVQGLLSQI-PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDT--GG--SYSVA 147 (324)
Q Consensus 75 ~~A~~~L~~~-p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~T--gG--~Y~va 147 (324)
..|...|... .....+++|||++.....|+.++.++++.+++.||+|++||+|.+ ..+|++||... +| .|+..
T Consensus 110 ~~a~~~l~~~~~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA~~~~~~g~~~~~~~ 189 (266)
T 4hqo_A 110 DEVQKHLNDRVNREKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAGCRPREPNCKFYSY 189 (266)
T ss_dssp HHHHHHHHTTCSCTTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCCHHHHHHHHTCCTTCSSCTTEEC
T ss_pred HHHHHHHhhccccCCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccCHHHHHHhhCCCCCCCCCCeEEe
Confidence 9999999864 223456788888866655777888999999999999999999974 57899999885 33 77888
Q ss_pred CCHHHHHHHHHhcC
Q 020564 148 LDESHFKELIMEHA 161 (324)
Q Consensus 148 ~d~~hl~~lL~~~~ 161 (324)
.|.+.|.+++..+.
T Consensus 190 ~d~~~L~~i~~~l~ 203 (266)
T 4hqo_A 190 ADWNEAVALIKPFI 203 (266)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 99999999888776
No 14
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=99.47 E-value=6.6e-14 Score=122.10 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=120.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC--CHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~--n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+.+++++.+++.+..|++.+- ++..++|||.| ++.+..+.|++. +.+++.++|.++....|.|.++.||..|...
T Consensus 18 m~~~~~~~~k~~~~~~~~~l~--~~~~~v~vv~f-~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~~~ 94 (194)
T 1mf7_A 18 IIPHDFRRMKEFVSTVMEQLK--KSKTLFSLMQY-SEEFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRE 94 (194)
T ss_dssp SCHHHHHHHHHHHHHHHHHHC--CTTEEEEEEEE-SSSEEEEECHHHHHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhcC--CCCeEEEEEEe-cCCceEEEecCCcCCHHHHHHHHHhCcCCCCCchHHHHHHHHHHH
Confidence 456789999999999998864 56789999999 477888888865 3345677777653357899999999999986
Q ss_pred hhCCC---CCCCceEEEEEeCCCCC-CcccHHHHHHHHHhcCcEEEEEEccchH------HHHHHHHHhh-CCeeEEeCC
Q 020564 81 LSQIP---SYGHREVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDT-GGSYSVALD 149 (324)
Q Consensus 81 L~~~p---~~~~reILil~gS~~t~-d~g~i~~ti~~akk~~IrV~vI~Lgae~------~iLk~ia~~T-gG~Y~va~d 149 (324)
|.... ....+++|||++..... |+.++.++++.+++.||+|++||+|.+. ..|++||..+ +|.|+.+.|
T Consensus 95 l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~ 174 (194)
T 1mf7_A 95 LFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNN 174 (194)
T ss_dssp TTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred hcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccccccccHHHHHHHhCCCCcccEEEeCC
Confidence 64321 12345788888755444 6666678899999999999999999764 7899999996 578888989
Q ss_pred HHHHHHHHHhc
Q 020564 150 ESHFKELIMEH 160 (324)
Q Consensus 150 ~~hl~~lL~~~ 160 (324)
.+.|.+++.++
T Consensus 175 ~~~l~~~~~~i 185 (194)
T 1mf7_A 175 FEALKTIQNQL 185 (194)
T ss_dssp GGGGGGGHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887777654
No 15
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=99.46 E-value=8.9e-13 Score=122.24 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=123.1
Q ss_pred CCCcHH-HHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCC----HHHHHHHHhhhc---CCCCcchHHHHH
Q 020564 3 FRPSRM-AVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGS----PESHIKALMGKL---GCSGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl-~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n----~~~~~~~L~~~~---~~~G~~sL~naL 74 (324)
+..+.+ +.+++.+..|++.+-..+...++|||.|. ..+..+.+++.. ..+++++|..+. ...|.|.++.||
T Consensus 34 M~~~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs-~~~~~~~~l~~~~~~~~~~l~~~i~~l~~~~~~~G~T~~~~aL 112 (281)
T 4hqf_A 34 IRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFS-NNAREIIRLHSDASKNKEKALIIIKSLLSTNLPYGKTSLTDAL 112 (281)
T ss_dssp SSTHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEE-TTEEEEEEECSSCSSCHHHHHHHHHHHHHTTGGGCSCCHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcC-CCceEEEEccccCccCHHHHHHHHHHHhhccCCCCCccHHHHH
Confidence 344444 78888888888887555668999999996 667788888754 677877777653 357889999999
Q ss_pred HHHHHHhhCCC-CCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHh--hCC--eeEEe
Q 020564 75 DLVQGLLSQIP-SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQD--TGG--SYSVA 147 (324)
Q Consensus 75 ~~A~~~L~~~p-~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~--TgG--~Y~va 147 (324)
..|+..|.... ....+++|||++.....|+.++.++++.+++.||+|++||+|.+ ...|++||.. ||| .|+.+
T Consensus 113 ~~a~~~l~~~~~r~~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~~~~~~g~~~~~~~ 192 (281)
T 4hqf_A 113 LQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGCHPSDGKCNLYAD 192 (281)
T ss_dssp HHHHHHHHTSCCCTTCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTTSCSSSSCCTTEEE
T ss_pred HHHHHHHHhccCCCCCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhCCCCCCCCCceEEe
Confidence 99999987642 12356788888866655777888999999999999999999974 6889999987 676 77888
Q ss_pred CCHHHHHHHHHhc
Q 020564 148 LDESHFKELIMEH 160 (324)
Q Consensus 148 ~d~~hl~~lL~~~ 160 (324)
.|.+.|.+++..+
T Consensus 193 ~~~~~L~~~~~~l 205 (281)
T 4hqf_A 193 SAWENVKNVIGPF 205 (281)
T ss_dssp ECGGGHHHHHHHH
T ss_pred cchhhhhcccCCc
Confidence 8988887766544
No 16
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=99.45 E-value=8.1e-13 Score=117.13 Aligned_cols=151 Identities=15% Similarity=0.159 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCC--CCHHHHHHHHhhhcCCCC-cchHHHHHHHHHHHhhCC
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--GSPESHIKALMGKLGCSG-DSSLQNALDLVQGLLSQI 84 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt--~n~~~~~~~L~~~~~~~G-~~sL~naL~~A~~~L~~~ 84 (324)
++.+++.+..|++.+-..++..++|||+|. +.+....|++ .+..+++++|..+....| .|.++.||..|...|...
T Consensus 23 ~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~-~~~~~~~~l~~~~~~~~~~~~i~~l~~~~G~~T~~~~aL~~a~~~l~~~ 101 (213)
T 1pt6_A 23 WDSVTAFLNDLLKRMDIGPKQTQVGIVQYG-ENVTHEFNLNKYSSTEEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTE 101 (213)
T ss_dssp HHHHHHHHHHHHTTSCBSTTSBEEEEEEES-SSEEEEECTTTCSSHHHHHHHHHTCCCCCCSSCCHHHHHHHHHHTTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEEEeC-CCccEEEeccccCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHhcCc
Confidence 566666677777654335789999999995 7788899985 356677788876533345 589999999999875321
Q ss_pred ---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch-----------HHHHHHHHHh-hCCeeEEeCC
Q 020564 85 ---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-----------MFICKHLCQD-TGGSYSVALD 149 (324)
Q Consensus 85 ---p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae-----------~~iLk~ia~~-TgG~Y~va~d 149 (324)
.....+++||+++.....+..++.++++.+++.||+|++||+|.+ ...|++||.. |||.|+.+.|
T Consensus 102 ~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~~~~~~~~~~~~~~~L~~iA~~~~~g~~~~~~~ 181 (213)
T 1pt6_A 102 ARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSD 181 (213)
T ss_dssp GGTCCTTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred ccCCCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccccccccccchhhHHHHHHHhCCCchhcEEEeCC
Confidence 113456788888755554554577889999999999999999965 3689999999 8999999989
Q ss_pred HHHHHHHHHh
Q 020564 150 ESHFKELIME 159 (324)
Q Consensus 150 ~~hl~~lL~~ 159 (324)
.+.|.+++..
T Consensus 182 ~~~l~~i~~~ 191 (213)
T 1pt6_A 182 ELALVTIVKT 191 (213)
T ss_dssp GGGGGGGHHH
T ss_pred HHHHHHHHHH
Confidence 8877766665
No 17
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=99.44 E-value=3e-12 Score=127.90 Aligned_cols=149 Identities=13% Similarity=0.153 Sum_probs=117.2
Q ss_pred CcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCC--------CCHHHHHHHHhhhcCCCCcchHHHHHHH
Q 020564 5 PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG--------GSPESHIKALMGKLGCSGDSSLQNALDL 76 (324)
Q Consensus 5 P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt--------~n~~~~~~~L~~~~~~~G~~sL~naL~~ 76 (324)
++||+.+++++..|++.+ +|.+++|||+| ++.+..+.|++ .|...+.+.|.++ .+.|+|.|..||..
T Consensus 94 ~~rl~~ak~a~~~ll~~L---~~~drv~lV~F-s~~a~~~~p~t~~l~~~~~~~~~~l~~~I~~L-~~~GgT~l~~aL~~ 168 (464)
T 4fx5_A 94 RTKMMAAKEATKVAIDTL---TDGAFFAVVAG-TEGARVVYPTGGQLLRADYQSRAAAKEAVGRL-HANGGTAMGRWLAQ 168 (464)
T ss_dssp THHHHHHHHHHHHHHHHS---CTTCEEEEEEE-SSSEEEEESSSSSCEECSHHHHHHHHHHHHTC-CCCSCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhC---CCCCEEEEEEE-cCceEEEecCCcccccCCHHHHHHHHHHHHcC-CCCCCCcHHHHHHH
Confidence 899999999999999884 68899999999 57889999986 4556666777664 57889999999999
Q ss_pred HHHHhhCCCCCCCceEEEEEeCCCCC--CcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhhCCeeEEeCCHHH
Q 020564 77 VQGLLSQIPSYGHREVLILYSALSTC--DPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDTGGSYSVALDESH 152 (324)
Q Consensus 77 A~~~L~~~p~~~~reILil~gS~~t~--d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~TgG~Y~va~d~~h 152 (324)
|+..|...+ ...++|||++..... ++..+.++++ +.+.+|+|++||+|.+ ...|++||+.|||.|+.+.|.+.
T Consensus 169 A~~~l~~~~--~~~~~IILLTDG~~~~~~~~~l~~~~~-a~~~~i~i~tiGiG~~~d~~~L~~IA~~tgG~~~~v~d~~~ 245 (464)
T 4fx5_A 169 AGRIFDTAP--SAIKHAILLTDGKDESETPADLARAIQ-SSIGNFTADCRGIGEDWEPKELRKIADALLGTVGIIRDPAT 245 (464)
T ss_dssp HHHHHTTCT--TSEEEEEEEESSCCTTSCHHHHHHHHH-HHTTTCEEEEEEESSSSCHHHHHHHHHHTTCCEEEESSGGG
T ss_pred HHHHHhcCC--CCCCEEEEEcCCCCCCCChHHHHHHHH-HhcCCCeEEEEEeCCccCHHHHHHHHHhCCCEEEEcCCHHH
Confidence 999998764 345677777644332 2223333333 5578999999999964 58999999999999999999888
Q ss_pred HHHHHHhcC
Q 020564 153 FKELIMEHA 161 (324)
Q Consensus 153 l~~lL~~~~ 161 (324)
|.+.|..++
T Consensus 246 L~~~f~~i~ 254 (464)
T 4fx5_A 246 LAEDFREMT 254 (464)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777665554
No 18
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=99.41 E-value=2.3e-12 Score=131.43 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=110.6
Q ss_pred CC-CCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee--------------eEeecCCCCHHHHHHHHhhhcCC-C
Q 020564 2 DF-RPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA--------------NCLTDLGGSPESHIKALMGKLGC-S 65 (324)
Q Consensus 2 D~-~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a--------------~~l~~lt~n~~~~~~~L~~~~~~-~ 65 (324)
|+ .||||+++++++..|++.....||.++||||+|. +.+ ..+.+++....+.++.|.+...+ .
T Consensus 24 d~~~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~-~~~~~~plt~d~~y~~i~vl~~l~~~~~~~l~~l~~~l~~~~ 102 (565)
T 1jey_B 24 IPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG-TDGTDNPLSGGDQYQNITVHRHLMLPDFDLLEDIESKIQPGS 102 (565)
T ss_dssp BTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-CSSCBSTTCTTTCSTTEEEEEEEECCCHHHHHHHHTTCCCCS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEc-cCCCCCccccccCCCceEEeecCCCCCHHHHHHHHhhccCCC
Confidence 44 6899999999999999998889999999999995 333 24555554455677888773233 3
Q ss_pred CcchHHHHHHHHHHHhhCC--CCCCCceEEEEEe-CCCCCCcccHHHHHHHHHhcCcEEE-EEEccch------------
Q 020564 66 GDSSLQNALDLVQGLLSQI--PSYGHREVLILYS-ALSTCDPGDIMETIQKCKESKIRCS-VIGLSAE------------ 129 (324)
Q Consensus 66 G~~sL~naL~~A~~~L~~~--p~~~~reILil~g-S~~t~d~g~i~~ti~~akk~~IrV~-vI~Lgae------------ 129 (324)
++++|++||.+|..+|++. +.+..+++|||++ .....+..++.++++.|++.||+|+ |||++.+
T Consensus 103 ~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~~~~~~~a~~l~~~gI~i~~vig~g~~~~~~~~~~~~~~ 182 (565)
T 1jey_B 103 QQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSGDRGDGP 182 (565)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCCTTHHHHHHHHHHTTEEEEEEESSCCC----------CC
T ss_pred ccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCHHHHHHHHHHHHhcCcEEEEEeccCCCcCCccccccccc
Confidence 6799999999999999876 3333444555554 2333345578899999999999999 9988732
Q ss_pred ----------------------HHHHHHHHHhhCC-----eeEEeC
Q 020564 130 ----------------------MFICKHLCQDTGG-----SYSVAL 148 (324)
Q Consensus 130 ----------------------~~iLk~ia~~TgG-----~Y~va~ 148 (324)
..+|++|++.||| .|+.+.
T Consensus 183 ~~~~~~~~~f~~~~~~~~~~~~e~~L~~ia~~~~G~~~~s~~~~~~ 228 (565)
T 1jey_B 183 FRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFS 228 (565)
T ss_dssp CCTTCSSCCCCTTTSCHHHHHHHHHHHHHHHHHHCGGGGGGEEEHH
T ss_pred ccccccccccchhccccchhhhHHHHHHHHHhcCCCcccceeecHH
Confidence 2469999999999 898864
No 19
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.40 E-value=1.4e-12 Score=112.12 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhc--CCCCcchHHHHHHHHHHHhhC--
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL--GCSGDSSLQNALDLVQGLLSQ-- 83 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~--~~~G~~sL~naL~~A~~~L~~-- 83 (324)
+...++.++.++..+ .+|.+++|||.| +..++.+.|++.|.+.+.++|..+. .+.|.|.++.||+.|...|..
T Consensus 24 ~~~~~~~~~~~~~~~--~~~~~~v~lv~f-~~~~~~~~~l~~~~~~~~~~i~~l~~~~~~g~T~~~~al~~a~~~l~~~~ 100 (185)
T 3n2n_F 24 WNEIYYFVEQLAHKF--ISPQLRMSFIVF-STRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYEN 100 (185)
T ss_dssp HHHHHHHHHHHHHHC--CCTTEEEEEEEE-SSSEEEEEEEECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--CCCCcEEEEEEE-ecCceEEeccCCCHHHHHHHHHHHhhhcCCCCccHHHHHHHHHHHHhhcc
Confidence 445566777777776 458999999999 5778999999999999988888764 357899999999999998842
Q ss_pred CCCCCCceEEEEEeCCCCCCcc--cHHHHHHHHHhcCcEEEEEEccc-hHHHHHHHHHhhCCeeEEeCCHHHHHHHHHhc
Q 020564 84 IPSYGHREVLILYSALSTCDPG--DIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALDESHFKELIMEH 160 (324)
Q Consensus 84 ~p~~~~reILil~gS~~t~d~g--~i~~ti~~akk~~IrV~vI~Lga-e~~iLk~ia~~TgG~Y~va~d~~hl~~lL~~~ 160 (324)
.+....+++||+++.....+.. +..+.++.+++.+|+|++||+|. +...|++||...++.|.+..+.+.|.+++.++
T Consensus 101 ~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~L~~iA~~~~~~~~~~~~~~~L~~~~~~i 180 (185)
T 3n2n_F 101 RQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSI 180 (185)
T ss_dssp TTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECSSCCHHHHTTTSSSGGGEEEHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEeccCCHHHHHHHhCCCCCeEEeccHHHHHHHHHHHH
Confidence 2222356788888755432222 33578999999999999999994 36789999977655555443388888887765
Q ss_pred C
Q 020564 161 A 161 (324)
Q Consensus 161 ~ 161 (324)
.
T Consensus 181 ~ 181 (185)
T 3n2n_F 181 L 181 (185)
T ss_dssp H
T ss_pred H
Confidence 4
No 20
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.34 E-value=7.8e-12 Score=129.65 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=123.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC----CHHHHHHHHhhhcC----CCCcchHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLG----CSGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~----n~~~~~~~L~~~~~----~~G~~sL~naL 74 (324)
|..++++.+++.+..|++.+-......|+|||+| ++.+..+.+++. |.++++++|+++.. ..|.|.++.||
T Consensus 256 M~~~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~~~~~ggT~~~~aL 334 (741)
T 3hrz_D 256 IGASDFTGAKKCLVNLIEKVASYGVKPRYGLVTY-ATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKAL 334 (741)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHHHTTCCGGGGSSSCCCCHHHHH
T ss_pred ccccchHHHHHHHHHHHHhhhccCCCceEEEEEe-ccCCceeEeecccCCcCHHHHHHHHHhcccccccCCCChHHHHHH
Confidence 4567899999999999999877777799999999 578899999998 88889999987632 67889999999
Q ss_pred HHHHHHhhCCCC------CCCceEEEEEeCCCCC---CcccHHHHHH----------HHHhcCcEEEEEEccc--hHHHH
Q 020564 75 DLVQGLLSQIPS------YGHREVLILYSALSTC---DPGDIMETIQ----------KCKESKIRCSVIGLSA--EMFIC 133 (324)
Q Consensus 75 ~~A~~~L~~~p~------~~~reILil~gS~~t~---d~g~i~~ti~----------~akk~~IrV~vI~Lga--e~~iL 133 (324)
..|+..|..... ...+++|||++..... ||....+.++ .+++.+|+|++||+|. +...|
T Consensus 335 ~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~~p~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L 414 (741)
T 3hrz_D 335 QAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNI 414 (741)
T ss_dssp HHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHH
T ss_pred HHHHHHHhhhhhccccchhccCeEEEEECCCccccCCCchHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHH
Confidence 999999943211 1235688888755332 3333333222 5678999999999994 56889
Q ss_pred HHHHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 020564 134 KHLCQDTGGS--YSVALDESHFKELIMEHA 161 (324)
Q Consensus 134 k~ia~~TgG~--Y~va~d~~hl~~lL~~~~ 161 (324)
++||..++|. |+.+.|.+.|.+++.+++
T Consensus 415 ~~ia~~~~g~~~~~~~~~~~~L~~~~~~l~ 444 (741)
T 3hrz_D 415 NALASKKDNEQHVFKVKDMENLEDVFYQMI 444 (741)
T ss_dssp HHHSCCCTTCCCEECBSSHHHHHHHHHHHH
T ss_pred HHHhcCCCCcceEEEeCCHHHHHHHHHHhh
Confidence 9999999995 889999999988887743
No 21
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=99.33 E-value=1.3e-14 Score=125.99 Aligned_cols=155 Identities=13% Similarity=0.125 Sum_probs=118.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHhh
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLS 82 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~L~ 82 (324)
|.++|++.+++.+..|++.. .++.+++|||+|.+..++.+.|++.+...+.+.|..+ .+.|.|.+..||..|+..|.
T Consensus 18 M~~~~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~~~~~~~~~~~~~~~i~~l-~~~g~T~~~~al~~a~~~l~ 94 (189)
T 2x31_A 18 AAVARLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGL-PGGGGTPLASGMEMAMVTAK 94 (189)
T ss_dssp SCC--CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCBCTTTCSCHHHHHHHHHHC-CCCBCCCCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceEecCCCCCHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHHH
Confidence 45789999999999999774 4799999999997657889999999999988888775 57789999999999999998
Q ss_pred CCCCCCCceEEEEEeCCCCCCcc-----------cHHHHHHHHHhcCcEEEEEEccch-HHHHHHHHHhhCCeeEEeCCH
Q 020564 83 QIPSYGHREVLILYSALSTCDPG-----------DIMETIQKCKESKIRCSVIGLSAE-MFICKHLCQDTGGSYSVALDE 150 (324)
Q Consensus 83 ~~p~~~~reILil~gS~~t~d~g-----------~i~~ti~~akk~~IrV~vI~Lgae-~~iLk~ia~~TgG~Y~va~d~ 150 (324)
.......+++|||++.....++. ++.+.++.+++.+|+|++|+++.. ...|++||+.|||.|+.+.|.
T Consensus 95 ~~~~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ig~g~~~~~~L~~iA~~~~G~~~~~~~~ 174 (189)
T 2x31_A 95 QARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRA 174 (189)
T ss_dssp TCTTTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCEEEEECTGGGGSCCTHHHHHHSSCSSSCSTTTEEEESSTTTHHH
T ss_pred hccCCCCceEEEEECCCCCCCCCCccccccchhHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHhcCCeEEECCCc
Confidence 76444456677777644322211 223456778899999999999875 678999999999999776443
Q ss_pred --HHHHHHHHhc
Q 020564 151 --SHFKELIMEH 160 (324)
Q Consensus 151 --~hl~~lL~~~ 160 (324)
+.|.+++...
T Consensus 175 ~~~~~~~~~~~~ 186 (189)
T 2x31_A 175 TAHKMADVLGAA 186 (189)
T ss_dssp HHHHHHHHHHHC
T ss_pred chHHHHHHHHHh
Confidence 3455555543
No 22
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.32 E-value=8.8e-12 Score=124.08 Aligned_cols=158 Identities=11% Similarity=0.103 Sum_probs=124.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC----CHHHHHHHHhhhcCC----CCcchHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLGC----SGDSSLQNAL 74 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~----n~~~~~~~L~~~~~~----~G~~sL~naL 74 (324)
+..++++.+++.+..|++.+-..++.+++|||+| ++.++.+.|++. |.+.+.++|.++... .|.|.++.||
T Consensus 22 M~~~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f-~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~ggT~~~~aL 100 (509)
T 2odp_A 22 VSENDFLIFKESASLMVDRIFSFEINVSVAIITF-ASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAAL 100 (509)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEE-SSSEEEEECTTSGGGGCHHHHHHHHHTCCGGGGTTCCSCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhhccCCCceEEEEEc-cCCCceeEeccCCCCCCHHHHHHHHHhcccccCCCCCCccHHHHH
Confidence 3456888999999999998876789999999999 578899999976 888899999876322 4889999999
Q ss_pred HHHHHHhhCCC---C------CCCceEEEEEeCCCCCCcccHHHHHHHHH---------hcCcEEEEEEccch---HHHH
Q 020564 75 DLVQGLLSQIP---S------YGHREVLILYSALSTCDPGDIMETIQKCK---------ESKIRCSVIGLSAE---MFIC 133 (324)
Q Consensus 75 ~~A~~~L~~~p---~------~~~reILil~gS~~t~d~g~i~~ti~~ak---------k~~IrV~vI~Lgae---~~iL 133 (324)
+.|...|.... . ...+++|||++.....+..+..++++.++ +.+|+|++||+|.+ ...|
T Consensus 101 ~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L 180 (509)
T 2odp_A 101 NSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWREL 180 (509)
T ss_dssp HHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCCCSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHH
T ss_pred HHHHHHHhhcccccccccccccccceEEEEECCCCccCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHH
Confidence 99999995421 0 12456888887554433344445555555 88999999999864 6899
Q ss_pred HHHHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 020564 134 KHLCQDTGGS--YSVALDESHFKELIMEHA 161 (324)
Q Consensus 134 k~ia~~TgG~--Y~va~d~~hl~~lL~~~~ 161 (324)
++||..++|. |+.+.|.+.|.+++..+.
T Consensus 181 ~~iA~~~~G~~~~~~~~~~~~l~~~~~~i~ 210 (509)
T 2odp_A 181 NELGSKKDGERHAFILQDTKALHQVFEHML 210 (509)
T ss_dssp HHHSCCCTTCCCEEEESSHHHHHHHHHHHE
T ss_pred HhhccCCCCceeeEEecCHHHHHHHHHhhh
Confidence 9999999998 889999999999998774
No 23
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=99.26 E-value=6.6e-11 Score=102.18 Aligned_cols=127 Identities=10% Similarity=0.015 Sum_probs=98.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC----CHHHHHHHHhhhcCCCCcchHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG----SPESHIKALMGKLGCSGDSSLQNALDLVQ 78 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~----n~~~~~~~L~~~~~~~G~~sL~naL~~A~ 78 (324)
+.+++++.+++.+..|++.+-..++..++|||.|. +.+....+++. +.+.+.++|.++....|.|.++.||+.|.
T Consensus 30 m~~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~-~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~~g~T~~~~aL~~a~ 108 (178)
T 2xgg_A 30 IGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYS-TDVHLQWDLQSPNAVDKQLAAHAVLDMPYKKGSTNTSDGLKACK 108 (178)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEES-SSEEEEECTTSGGGSCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeC-CceEEEEeCCCCCccCHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 45678999999999999885333456899999995 77888999987 77888888887644678899999999999
Q ss_pred HHhhCC---CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchH
Q 020564 79 GLLSQI---PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM 130 (324)
Q Consensus 79 ~~L~~~---p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~ 130 (324)
..|... .....+++||+++.....+..++.++++.+++.+|+|++||+|.++
T Consensus 109 ~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 109 QILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp HHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred HHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 987422 1124567888887655544445778999999999999999999764
No 24
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.12 E-value=4.7e-11 Score=103.31 Aligned_cols=149 Identities=13% Similarity=0.122 Sum_probs=107.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCH--HHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSP--ESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~--~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+.+++++.+++.+..+++.+ ..+..|+|||.|. +.+....|++... +++.+.+..+....|.|.++.||..|...
T Consensus 15 m~~~~~~~~k~~~~~~~~~l--~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~~~~i~~~~g~T~~~~aL~~a~~~ 91 (179)
T 1mjn_A 15 LQPDEFQKILDFMKDVMKKC--SNTSYQFAAVQFS-TSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATE 91 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHT--TTSSEEEEEEEES-SSEEEEECHHHHHHHCCHHHHHTTCCCCCBCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh--CCCCeEEEEEEEC-CceeEEEcCcccCCHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Confidence 45678999999999999986 3445699999995 7788888886422 13445555543346889999999999975
Q ss_pred hhC-C--CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchH------HHHHHHHHhhCCee-EEeCCH
Q 020564 81 LSQ-I--PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM------FICKHLCQDTGGSY-SVALDE 150 (324)
Q Consensus 81 L~~-~--p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~------~iLk~ia~~TgG~Y-~va~d~ 150 (324)
+.. . .....+++||+++.....|..+. +++.+|+|++||+|... ..|++||..++|.| +.+.|.
T Consensus 92 ~~~~~~g~r~~~~~~iillTDG~~~~~~~~------~~~~~i~i~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~~ 165 (179)
T 1mjn_A 92 VFREELGARPDATKVLIIITDGEATDSGNI------DAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTF 165 (179)
T ss_dssp TSSGGGTCCTTSEEEEEEEESSCCSSCSCC------GGGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHHHEEEESSG
T ss_pred hcccccCCCCCCCeEEEEEcCCCCCCCcch------HHHCCCEEEEEEccccccccccHHHHHHHhCCccHhcEEEeCCH
Confidence 432 1 11235678888875554444332 36789999999999754 68999999998865 788888
Q ss_pred HHHHHHHHhc
Q 020564 151 SHFKELIMEH 160 (324)
Q Consensus 151 ~hl~~lL~~~ 160 (324)
+.|.+++.++
T Consensus 166 ~~L~~i~~~i 175 (179)
T 1mjn_A 166 EKLKDLCTEL 175 (179)
T ss_dssp GGSCCHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777776654
No 25
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=99.11 E-value=5.3e-10 Score=98.25 Aligned_cols=149 Identities=8% Similarity=0.017 Sum_probs=111.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC--CHHHHHHHHhhhcCCCC-cchHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSG-DSSLQNALDLVQG 79 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~--n~~~~~~~L~~~~~~~G-~~sL~naL~~A~~ 79 (324)
+.+++++.+++.+..|++.+-...+.+|+|||.|. ..+....+++. +.+++.++|+++....| .|.++.||..|+.
T Consensus 34 m~~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs-~~~~~~~~l~~~~~~~~~~~~i~~l~~~gg~~T~~~~aL~~a~~ 112 (199)
T 3zqk_A 34 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYS-YMVTVEYPFSEAQSKGDILQRLREIRYQGGNRTNTGLALRYLSD 112 (199)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEES-SSEEEEECTTSCCCHHHHHHHHHHCCCCCCSCCCHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEEEC-CcccEEEecCCcCCHHHHHHHHHhCcCCCCCcChHHHHHHHHHH
Confidence 45678999999999999987656789999999995 77888999985 88888899987643445 5999999999998
Q ss_pred HhhCCC---CCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc--hHHHHHHHHHhhCCeeEEeCCHHHHH
Q 020564 80 LLSQIP---SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQDTGGSYSVALDESHFK 154 (324)
Q Consensus 80 ~L~~~p---~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga--e~~iLk~ia~~TgG~Y~va~d~~hl~ 154 (324)
.+.... ....+++||+++...+.|. +.+ + +.+|+|++||+|. +...|++||. +|.++.+.|.+.|.
T Consensus 113 ~l~~~~~g~r~~~~~~iillTDG~~~d~--v~~----~-~~~v~v~~iGiG~~~~~~~L~~iA~--~~~~~~~~~~~~L~ 183 (199)
T 3zqk_A 113 HSFLVSQGDREQAPNLVYMVTGNPASDE--IKR----L-PGDIQVVPIGVGPNANVQELERIGW--PNAPILIQDFETLP 183 (199)
T ss_dssp CCTCGGGTCCTTSCEEEEEEECSCCSSC--CCC----C-CTTEEEEEEEESTTCCHHHHHHHHT--TSCCEEESCTTTHH
T ss_pred HhhCcccCCCCCCCeEEEEEeCCCCchH--HHH----H-hCCCEEEEEEcCCCCCHHHHHHHhC--CCceEEeCCHHHHH
Confidence 653211 1234578888875443332 111 1 3799999999984 5689999998 44455778888888
Q ss_pred HHHHhcC
Q 020564 155 ELIMEHA 161 (324)
Q Consensus 155 ~lL~~~~ 161 (324)
+++.+++
T Consensus 184 ~~~~~l~ 190 (199)
T 3zqk_A 184 REAPDLV 190 (199)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 26
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.03 E-value=8.8e-11 Score=128.14 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=119.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCC--CHHHHHHHHhhhcCCCCcchHHHHHHHHHHH
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG--SPESHIKALMGKLGCSGDSSLQNALDLVQGL 80 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~--n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~ 80 (324)
+.+++++.+++.+..|++.|- .+..|+|||.|. ..+....+++. +..++.++++.+....|.|.++.||..|+..
T Consensus 143 m~~~~f~~~k~fv~~lv~~~~--~~~~rVglV~Fs-~~~~~~~~lt~~~~~~~l~~ai~~i~~~gG~T~~g~AL~~a~~~ 219 (1095)
T 3k6s_A 143 ISSRNFATMMNFVRAVISQFQ--RPSTQFSLMQFS-NKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHR 219 (1095)
T ss_dssp SCSHHHHHHHHHHHHHHHSSC--SSSEEEEEEEES-SSEEEEECSHHHHSCSCGGGGTTTCCCCCSCBCHHHHHHHHHTT
T ss_pred CChhHHHHHHHHHHHHHHhcc--ccccEEEEEEEC-CeEEEEecCcccCCHHHHHHHHhhhhcccCCChHHHHHHHHHHh
Confidence 568899999999999998863 445899999995 77899999974 5555666666654567889999999999987
Q ss_pred hhCCC---CCCCceEEEEEeCCCC-CCcccHHHHHHHHHhcCcEEEEEEccch------HHHHHHHHHhhCC-eeEEeCC
Q 020564 81 LSQIP---SYGHREVLILYSALST-CDPGDIMETIQKCKESKIRCSVIGLSAE------MFICKHLCQDTGG-SYSVALD 149 (324)
Q Consensus 81 L~~~p---~~~~reILil~gS~~t-~d~g~i~~ti~~akk~~IrV~vI~Lgae------~~iLk~ia~~TgG-~Y~va~d 149 (324)
+.... ....++|||+++.... .|+.++.++++.|++.||+|++||+|.. ...|++||..++| .++.+.|
T Consensus 220 lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~~IAs~p~g~~vf~v~d 299 (1095)
T 3k6s_A 220 LFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVED 299 (1095)
T ss_dssp TTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSC
T ss_pred hccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHHHCCCEEEEEecccccccccCHHHHHHHHcCCCCceEEEcCC
Confidence 75321 1234578888875555 4777888999999999999999999975 5899999999988 5577777
Q ss_pred HHHHHHHH
Q 020564 150 ESHFKELI 157 (324)
Q Consensus 150 ~~hl~~lL 157 (324)
.+.|++++
T Consensus 300 ~~~L~~i~ 307 (1095)
T 3k6s_A 300 FDALKDIQ 307 (1095)
T ss_dssp SGGGGSST
T ss_pred HHHHHHHH
Confidence 76665443
No 27
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=98.99 E-value=3.6e-09 Score=108.86 Aligned_cols=126 Identities=12% Similarity=0.087 Sum_probs=92.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee----------eEeecCCCCHHHHHHHHhhhcC---------
Q 020564 3 FRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------NCLTDLGGSPESHIKALMGKLG--------- 63 (324)
Q Consensus 3 ~~P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a----------~~l~~lt~n~~~~~~~L~~~~~--------- 63 (324)
..||||+++++++..|++...-.+|.++||||.|. +.+ ..+.||+.--.+.++.|.++..
T Consensus 55 ~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfg-t~~t~n~l~~d~i~v~~~L~~~~~~~ik~l~~l~~~~~~~~~~~ 133 (609)
T 1jey_A 55 DELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYG-TEKDKNSVNFKNIYVLQELDNPGAKRILELDQFKGQQGQKRFQD 133 (609)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES-CSSCBSTTCCTTEEEEEEEECCCHHHHHHHHTTSHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEc-cCCCCCcCCCCCeEEEecCCCCCHHHHHHHHHHhhcccchhhhh
Confidence 47999999999999999998888999999999995 444 4666765333334555554321
Q ss_pred --C-CCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCC-CCcc-----cHHHHHHHHHhcCcEEEEEEccch
Q 020564 64 --C-SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALST-CDPG-----DIMETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 64 --~-~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t-~d~g-----~i~~ti~~akk~~IrV~vI~Lgae 129 (324)
+ .++++|++||.+|..+|++...+..+++|||++...+ .+.. ++..+++.|++.||+|++|++|.+
T Consensus 134 ~~g~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TDg~~p~~~~~~~~~~~~~~a~~l~~~gI~i~~igig~~ 208 (609)
T 1jey_A 134 MMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKP 208 (609)
T ss_dssp HHCCSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEEBCCT
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcCCCCCCCCchHHHHHHHHHHHHHHhcCcEEEEEecCCC
Confidence 2 3569999999999999998743333455555553322 2211 355789999999999999999865
No 28
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=98.41 E-value=6.7e-07 Score=82.10 Aligned_cols=65 Identities=12% Similarity=0.232 Sum_probs=50.0
Q ss_pred CCceEEEEEeCCC-CCCcccHHHHHHHHHhcCcEEEEEEccch-------HHHHHHHHHhhCCeeEEeCCHHHHH
Q 020564 88 GHREVLILYSALS-TCDPGDIMETIQKCKESKIRCSVIGLSAE-------MFICKHLCQDTGGSYSVALDESHFK 154 (324)
Q Consensus 88 ~~reILil~gS~~-t~d~g~i~~ti~~akk~~IrV~vI~Lgae-------~~iLk~ia~~TgG~Y~va~d~~hl~ 154 (324)
++.++|||++... ++. ++-.++++.|++.||+||+||++.. ...|++||+.|||.|+.+ +.+.|.
T Consensus 8 ~~~k~iillTDG~~~~g-~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~tGG~yf~a-~~~~l~ 80 (242)
T 3rag_A 8 ATIRQILVITDGCSNIG-PDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIADAGGGMCRIV-QPADIS 80 (242)
T ss_dssp CCEEEEEEEESSCCCSS-SCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHHHTTSCEEEE-CGGGHH
T ss_pred CCccEEEEEccCCCCCC-CCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHHhcCCeEEEe-eHHHHH
Confidence 4567888887544 332 3667889999999999999999642 478999999999999998 444444
No 29
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=98.18 E-value=3.5e-06 Score=85.18 Aligned_cols=125 Identities=8% Similarity=0.002 Sum_probs=80.1
Q ss_pred cHHHHHHHH--HHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcC-CCCcchHHHHHHHHHHHhh
Q 020564 6 SRMAVVAKQ--VEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLG-CSGDSSLQNALDLVQGLLS 82 (324)
Q Consensus 6 ~Rl~~~~~~--l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~-~~G~~sL~naL~~A~~~L~ 82 (324)
+|+.. ++. +..|+.. ++.+++|||+|.+ .....|++.+.. +.+.++.+.. ..|+|+|+.||..|...
T Consensus 388 ~~l~~-~~~Aa~l~~~~~----~~~d~vglv~Fs~--~~~~~~~t~~~~-l~~~l~~l~~~~~GgT~i~~aL~~a~~~-- 457 (538)
T 1yvr_A 388 SILNA-SVVAAAMCMLVA----RTEKDSHMVAFSD--EMLPCPITVNML-LHEVVEKMSDITMGSTDCALPMLWAQKT-- 457 (538)
T ss_dssp SSCBH-HHHHHHHHHHHH----HHCSSEEEEEESS--SEECCSCCTTSC-HHHHHHHHTTCCCSCCCTTHHHHHHHHT--
T ss_pred CcHHH-HHHHHHHHHHHh----ccCCceEEEEECC--CceEcCCCCccc-HHHHHHHHhcCCCCCCcHHHHHHHHHhc--
Confidence 34555 443 4455544 6889999999964 345667776544 4444444322 57889999999999875
Q ss_pred CCCCCCCceEEEEEeCCCCC-CcccHHHHHHHHHhc-C--cEEEEEEccch-------------------HHHHHHHHHh
Q 020564 83 QIPSYGHREVLILYSALSTC-DPGDIMETIQKCKES-K--IRCSVIGLSAE-------------------MFICKHLCQD 139 (324)
Q Consensus 83 ~~p~~~~reILil~gS~~t~-d~g~i~~ti~~akk~-~--IrV~vI~Lgae-------------------~~iLk~ia~~ 139 (324)
...+.+|||++..... +..+..+.++.+++. | |++++|++|.. ..+|+.|++.
T Consensus 458 ----~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~~~~~~v~l~~igig~~~~~~~~~~~~~~~~i~g~~e~~l~~Ia~~ 533 (538)
T 1yvr_A 458 ----NTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNGFSIADPDDRGMLDICGFDSGALDVIRNF 533 (538)
T ss_dssp ----TCCCSEEEEEECCCCCSSSCCHHHHHHHHHHHHTCCCEEEEEECSSSSEESSCTTCTTEEEEETTCTTHHHHHHHH
T ss_pred ----cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHhCCCcEEEEEEecCCCCcccCCCCCCceeeccCCHHHHHHHHHH
Confidence 1234577777644332 223456666554433 5 56699999862 2689999999
Q ss_pred hCCee
Q 020564 140 TGGSY 144 (324)
Q Consensus 140 TgG~Y 144 (324)
|||.|
T Consensus 534 ~~G~~ 538 (538)
T 1yvr_A 534 TLDLI 538 (538)
T ss_dssp HTTC-
T ss_pred hCCCC
Confidence 99976
No 30
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=98.00 E-value=3.4e-05 Score=78.14 Aligned_cols=126 Identities=8% Similarity=-0.000 Sum_probs=83.2
Q ss_pred CcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhc-CCCCcchHHHHHHHHHHHhhC
Q 020564 5 PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKL-GCSGDSSLQNALDLVQGLLSQ 83 (324)
Q Consensus 5 P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~-~~~G~~sL~naL~~A~~~L~~ 83 (324)
+++++++... .|+.. .+.+++|||+|.+ . ....+++.+ ..+.+.|+.+. ...|+|+++.+|..|....
T Consensus 386 ~~~~e~Aa~l--a~~~~----r~~d~v~lv~Fs~-~-~~~~~~~~~-~~l~~~l~~l~~~~~ggTdi~~~l~~a~~~~-- 454 (535)
T 2nvo_A 386 LTPNMAAAAM--SLIAL----RTEPDALTMGFAE-Q-FRPLGITPR-DTLESAMQKAQSVSFGGTDCAQPILWAAQER-- 454 (535)
T ss_dssp CCHHHHHHHH--HHHHH----HHSSEEEEEEEBS-S-EEECCCCTT-CCHHHHHHHTCCSSBCCCCTTHHHHHHHHTT--
T ss_pred ccHHHHHHHH--HHHHc----CcCCceEEEEECC-c-ceEcCCCcc-hhHHHHHHHHhhCCCCCccHHHHHHHHHHhc--
Confidence 5677766543 35543 4666999999965 2 334566655 33445555542 2368899999988775432
Q ss_pred CCCCCCceEEEEEeCCCCC-CcccHHHHHHHHHhc---CcEEEEEEccch-------------------HHHHHHHHHhh
Q 020564 84 IPSYGHREVLILYSALSTC-DPGDIMETIQKCKES---KIRCSVIGLSAE-------------------MFICKHLCQDT 140 (324)
Q Consensus 84 ~p~~~~reILil~gS~~t~-d~g~i~~ti~~akk~---~IrV~vI~Lgae-------------------~~iLk~ia~~T 140 (324)
....+|||++...+. +..+..++++.+++. +++|.+|+++.. ..+|+.|++.|
T Consensus 455 ----~~~~~vIliTD~~~~~g~~~~~~al~~~r~~~~~~~klv~i~l~~~~~~~~~~~~~~~~~i~g~se~~l~~Ia~~~ 530 (535)
T 2nvo_A 455 ----LDVDTFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTATEFSIADPQRRDMLDVVGFDAAAPNVMTAFA 530 (535)
T ss_dssp ----CCCSEEEEEESSCCCCCSSCHHHHHHHHHHHHSCCCEEEEEETTCSCCCCSCTTCSSEEEEEECCTTHHHHHHHHH
T ss_pred ----CCCCEEEEEeCCCccCCCCCHHHHHHHHHHhhCCCCeEEEEeccCCCcccCCCCCCCceeeeCCCHHHHHHHHHHh
Confidence 123566766644332 223566778888876 899999999962 27899999999
Q ss_pred CCeeE
Q 020564 141 GGSYS 145 (324)
Q Consensus 141 gG~Y~ 145 (324)
||.|+
T Consensus 531 ~G~~~ 535 (535)
T 2nvo_A 531 RGEVL 535 (535)
T ss_dssp TTCC-
T ss_pred CCCcC
Confidence 99985
No 31
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=97.94 E-value=0.00015 Score=76.42 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=71.6
Q ss_pred CCcchHHHHHHHHHHHhhCC-CCCCCceEEEEEeCCCCCCccc------------------------------HHHHHHH
Q 020564 65 SGDSSLQNALDLVQGLLSQI-PSYGHREVLILYSALSTCDPGD------------------------------IMETIQK 113 (324)
Q Consensus 65 ~G~~sL~naL~~A~~~L~~~-p~~~~reILil~gS~~t~d~g~------------------------------i~~ti~~ 113 (324)
.++++++.||+.|...|+.. ++.+ .+|++|.+++-+.-||. +.+.++.
T Consensus 263 ~~~~a~G~Al~~A~~lL~~~~~~~G-GrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~~~~~~a~~fY~~la~~ 341 (769)
T 2nut_A 263 RPLRSSGVALSIAVGLLECTFPNTG-ARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANR 341 (769)
T ss_dssp CCCCCHHHHHHHHHHHHHHHSCSSC-CEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHhhcccCCC-cEEEEEeCCCCCCCCCCCcCcccccccccccccccchhhhccchHHHHHHHHHH
Confidence 45689999999999999943 2223 56999998766544441 1247888
Q ss_pred HHhcCcEEEEEEccch---HHHHHHHHHhhCCeeEEeCC--HHHHHHHHHhcCC
Q 020564 114 CKESKIRCSVIGLSAE---MFICKHLCQDTGGSYSVALD--ESHFKELIMEHAP 162 (324)
Q Consensus 114 akk~~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~va~d--~~hl~~lL~~~~~ 162 (324)
+.+++|.||+..++.+ +..++.+++.|||..+...+ ...|++-|...+.
T Consensus 342 ~~~~gi~VDlF~~~~~~vdla~l~~l~~~TGG~~~~~~~F~~~~~~~~l~~~~~ 395 (769)
T 2nut_A 342 AATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFT 395 (769)
T ss_dssp HHHHTCEEEEEEECSSCCCHHHHTHHHHHSSCCEEEESCSSSHHHHHHHHHTTC
T ss_pred HHHCCeEEEEEeccCCccChHHHHHHhhcCCceEEEcCCCchhhHHHHHHHHHh
Confidence 9999999999999864 68999999999998765543 4456665555553
No 32
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=97.66 E-value=0.00083 Score=71.26 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCccc-------------------------HH-HHHHHHHhc
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGD-------------------------IM-ETIQKCKES 117 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~-------------------------i~-~ti~~akk~ 117 (324)
..++.+++.||+.|...|+.. + .+|++|.+++-|.-||. .. +.+..+.++
T Consensus 302 ~~~~~a~G~AL~~A~~lL~~~---G-GrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~l~~~a~~fY~~la~~~~~~ 377 (810)
T 1pcx_A 302 LITNFALGPALKSAYHLIGGV---G-GKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKV 377 (810)
T ss_dssp CCCCCCHHHHHHHHHHHHTTT---C-EEEEEEESSCCCSSTTCCCC--------------------CCHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHHhc---C-CEEEEEecCCCCCCCCcccccccccccCcccchhhhcccchHHHHHHHHHHHHC
Confidence 357789999999999999964 2 47999998765543331 12 457888999
Q ss_pred CcEEEEEEccch---HHHHHHHHHhhCCeeEE
Q 020564 118 KIRCSVIGLSAE---MFICKHLCQDTGGSYSV 146 (324)
Q Consensus 118 ~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~v 146 (324)
+|-||+..++.+ +..++.+++.|||.-+.
T Consensus 378 gi~VDlF~~s~~~~dla~l~~l~~~TGG~v~~ 409 (810)
T 1pcx_A 378 QITVDLFLASEDYMDVASLSNLSRFTAGQTHF 409 (810)
T ss_dssp TEEEEEEEEESSCCCHHHHHHHHHTTTCCEEE
T ss_pred CeEEEEEEccCCccChHHHHHHHhcCCcEEEE
Confidence 999999999864 78999999999997543
No 33
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=97.51 E-value=0.00021 Score=76.60 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeE---------------------------------------eec
Q 020564 6 SRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANC---------------------------------------LTD 46 (324)
Q Consensus 6 ~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~---------------------------------------l~~ 46 (324)
+||+.+++++..|++ ++..+|.+|+|||+|.+ .+.. ..|
T Consensus 246 ~Rl~~~K~a~~~~ld-~L~~~~~drVgLV~Fs~-~a~~~~~~~v~~~~~~~~g~~~n~~~~w~~~~t~~t~~~~~~~~lp 323 (893)
T 2ww8_A 246 RRAERAGEATRSLID-KITSDSENRVALVTYAS-TIFDGTEFTVEKGVADKNGKRLNDSLFWNYDQTSFTTNTKDYSYLK 323 (893)
T ss_dssp CHHHHHHHHHHHHHH-HHHTSTTCEEEEEEESS-SBCBSCEEEEECCEECTTCCEECCCTTSCTTCCEEEEECCBCCEEE
T ss_pred hHHHHHHHHHHHHHH-HhhcCCCcEEEEEEecC-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 499999999999995 55668999999999964 2211 236
Q ss_pred CCCCHHHHH---HHHhhh---------cCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEe
Q 020564 47 LGGSPESHI---KALMGK---------LGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYS 97 (324)
Q Consensus 47 lt~n~~~~~---~~L~~~---------~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~g 97 (324)
||.|..++. +.|.+. +.+.|+|.++.||.+|+..|........+++|||++
T Consensus 324 LT~d~~~i~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL~~~~~~~~~kvIILLT 386 (893)
T 2ww8_A 324 LTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQNSQKVIFHIT 386 (893)
T ss_dssp EECCHHHHHHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHHHHHSCSSSEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHHHhhcccCCCeEEEEEc
Confidence 677875553 444321 123688999999999999997421124567888885
No 34
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=97.43 E-value=0.0043 Score=65.42 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=69.6
Q ss_pred CcchHHHHHHHHHHHhhCC-CCCCCceEEEEEeCCCCCCccc-----------------------------H-HHHHHHH
Q 020564 66 GDSSLQNALDLVQGLLSQI-PSYGHREVLILYSALSTCDPGD-----------------------------I-METIQKC 114 (324)
Q Consensus 66 G~~sL~naL~~A~~~L~~~-p~~~~reILil~gS~~t~d~g~-----------------------------i-~~ti~~a 114 (324)
++.+++.||+.|...|+.. ++.+ -+|++|.+++-|.-||. . .+.+..+
T Consensus 258 ~~~~~G~Al~~A~~ll~~~~~~~G-GrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~ 336 (768)
T 1m2o_A 258 PLRATGSALNIASLLLQGCYKNIP-ARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRV 336 (768)
T ss_dssp CCCCHHHHHHHHHHHHHHHCTTSC-CEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhhccCCCC-cEEEEEeCCCCCCCCccccccccccccccccccccchhhhcCchHHHHHHHHHHH
Confidence 5569999999999999853 2223 56999998766543331 1 2457778
Q ss_pred HhcCcEEEEEEccch---HHHHHHHHHhhCCeeEEe--CCHHHHHHHHHhcCC
Q 020564 115 KESKIRCSVIGLSAE---MFICKHLCQDTGGSYSVA--LDESHFKELIMEHAP 162 (324)
Q Consensus 115 kk~~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~va--~d~~hl~~lL~~~~~ 162 (324)
.+++|-||+..++.+ +..++.+++.|||.-+.- -+...|++-|...+.
T Consensus 337 ~~~gi~VDlF~~~~~~~dla~l~~l~~~TGG~v~~y~~f~~~~~~~~l~r~l~ 389 (768)
T 1m2o_A 337 AANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFA 389 (768)
T ss_dssp HHHTCEEEEEEECSSCCSHHHHHHHHHHHTCCEEEESCTTSHHHHHHHHHTTC
T ss_pred HHCCeEEEEEEccCCccChHHHhhHhhcCCceEEEcCCCchHHHHHHHHHHHh
Confidence 899999999999854 689999999999965433 344567766666664
No 35
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=97.41 E-value=0.002 Score=69.34 Aligned_cols=78 Identities=15% Similarity=0.212 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCccc-------------------------HH-HHHHHHHhc
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGD-------------------------IM-ETIQKCKES 117 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~-------------------------i~-~ti~~akk~ 117 (324)
...+.+++.||+.|...|+.. --+|++|.+++-|.-||. +. +.+..+.++
T Consensus 418 ~~~~~~~G~AL~aA~~lL~~~----GGrI~~F~sg~Pt~GpG~l~~re~~~~~~~~ke~~~ll~~a~~FYk~LA~~~~~~ 493 (926)
T 1m2v_B 418 LITNFALGPALKSAYHLIGGV----GGKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKV 493 (926)
T ss_dssp CCCCCCHHHHHHHHHHHHTTT----CEEEEEEESSCCCSSTTCCCCCCC----CCTTHHHHHTSCSSTHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHhh----CCEEEEEecCCCCCCCCcccccccccccCcccchhhhccchHHHHHHHHHHHHHc
Confidence 356789999999999999965 247999998775543331 22 568889999
Q ss_pred CcEEEEEEccch---HHHHHHHHHhhCCeeE
Q 020564 118 KIRCSVIGLSAE---MFICKHLCQDTGGSYS 145 (324)
Q Consensus 118 ~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~ 145 (324)
+|-||+..++.+ +..++.+++.|||.-+
T Consensus 494 gisVDlF~~s~~~vdla~l~~l~~~TGG~v~ 524 (926)
T 1m2v_B 494 QITVDLFLASEDYMDVASLSNLSRFTAGQTH 524 (926)
T ss_dssp TEEEEEEEEESSCCCHHHHHHHHHTTTCCEE
T ss_pred CeEEEEEEccCCCcChHHHHHHHhcCCceEE
Confidence 999999999864 7899999999999654
No 36
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=97.17 E-value=0.009 Score=62.84 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCccc------------------------HH-HHHHHHHhcCc
Q 020564 65 SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGD------------------------IM-ETIQKCKESKI 119 (324)
Q Consensus 65 ~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~------------------------i~-~ti~~akk~~I 119 (324)
..+.+++.||+.|...|+.. --+|++|.+++-|.-||. .. +.+..+.+++|
T Consensus 268 ~~~~~~G~AL~aA~~ll~~~----GGrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~~~~a~~fY~~la~~~~~~~i 343 (751)
T 3eh1_A 268 ETHSALGPALQAAFKLMSPT----GGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQT 343 (751)
T ss_dssp CCCCCHHHHHHHHHHHHTTT----CEEEEEEECSCCCSSTTCCCCCCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTE
T ss_pred CCccchHHHHHHHHHHhhcC----CCEEEEEecCCCCCCCCccccccccccCCCchhhhhhcchHHHHHHHHHHHHhcCc
Confidence 34579999999999999864 347999987765544441 23 57889999999
Q ss_pred EEEEEEccch---HHHHHHHHHhhCCeeEE
Q 020564 120 RCSVIGLSAE---MFICKHLCQDTGGSYSV 146 (324)
Q Consensus 120 rV~vI~Lgae---~~iLk~ia~~TgG~Y~v 146 (324)
-||+..++.+ +..++.+++.|||.-+.
T Consensus 344 ~VDlF~~s~~~~dlatl~~l~~~TGG~v~~ 373 (751)
T 3eh1_A 344 AVDLFLLSSQYSDLASLACMSKYSAGCIYY 373 (751)
T ss_dssp EEEEEECCSSCCCHHHHTHHHHTTTCCEEE
T ss_pred eEEEEEccCcccChHhHHHHHhhcCceEEE
Confidence 9999999854 78999999999996544
No 37
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=96.92 E-value=0.031 Score=50.11 Aligned_cols=147 Identities=15% Similarity=0.116 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcCCCC--c--chHHHHHHHHHH---H
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSG--D--SSLQNALDLVQG---L 80 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~~~G--~--~sL~naL~~A~~---~ 80 (324)
++.+++.+..++++.-..+...|+|+++|+|+......++|.|..+..+.+.+.. .+| + -+--.||..|.. .
T Consensus 20 i~~lk~~~~~l~~~l~~~~~~~r~Gfg~f~Dk~~~~~l~lT~d~~~F~~~v~~~~-vsg~~D~PE~g~dal~qa~~c~~~ 98 (212)
T 2iue_A 20 LSNVQTLGSDLLKALNEISRSGRIGFGSIVNMTFQHILKLTADSSQFQRELRKQL-VSGKLATPKGQLDAVVQVAICLGE 98 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCEEEEEEEESSSCEEEEEEEESCHHHHHHHHHTCC-CCCCSSSSBCHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcCceEEEEEEEcCcceecCCcCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHHHhhhh
Confidence 5666667777766654556789999999999977778899999999999998742 211 1 123334544443 2
Q ss_pred hhCCCCCCCceEEEEEeCCCC--C-----------------------------CcccHHHHHHHHHhcCcEEEEEEccch
Q 020564 81 LSQIPSYGHREVLILYSALST--C-----------------------------DPGDIMETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 81 L~~~p~~~~reILil~gS~~t--~-----------------------------d~g~i~~ti~~akk~~IrV~vI~Lgae 129 (324)
+.=+ + .+|+||+++.-.. . |...+.+..+.++++||.+....=...
T Consensus 99 i~Wr-~--a~rllvl~TDa~~H~~gDg~l~gi~~pnd~~chl~~g~y~~s~~~Dyps~~q~~~~l~~~~i~~ifavt~~~ 175 (212)
T 2iue_A 99 IGWR-N--GTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSRM 175 (212)
T ss_dssp HTCC-S--SEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHHHHHHHHTCEEEEEEEHHH
T ss_pred cccC-C--ccEEEEEECcCCccccCCccccccccCCccccccCCCeeccCcccCCCCHHHHHHHHHhcCCcEEEEEccch
Confidence 3333 2 6788988852211 1 223566788999899998766555556
Q ss_pred HHHHHHHHHhhCCeeE--EeCCHHHHHHHHH
Q 020564 130 MFICKHLCQDTGGSYS--VALDESHFKELIM 158 (324)
Q Consensus 130 ~~iLk~ia~~TgG~Y~--va~d~~hl~~lL~ 158 (324)
....+++++..+|... ...|...+.+|..
T Consensus 176 ~~~Y~~l~~~i~~s~v~~L~~dSsni~~li~ 206 (212)
T 2iue_A 176 VKTYEKLTTFIPKLTIGELSDDSSNVAQLIR 206 (212)
T ss_dssp HHHHHHHHHHSTTCEEEEESSCCHHHHHHHH
T ss_pred hHHHHHHHHHcccceeeeecCCcHHHHHHHH
Confidence 6789999998888773 3445555555543
No 38
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=96.72 E-value=0.0022 Score=58.71 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=59.7
Q ss_pred cHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCe--eeEe-ecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHhh
Q 020564 6 SRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV--ANCL-TDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLS 82 (324)
Q Consensus 6 ~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~--a~~l-~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~L~ 82 (324)
.||..++.++..++..+-.....++||||+|++.. ++.+ .|+|.+. .+...|..+ ...|.|.++.||..|+.+++
T Consensus 149 ~kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~~ll~pfT~~~-~~~~~l~~L-~agG~Tplg~AL~~A~~~~~ 226 (242)
T 3rag_A 149 DKIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEATRLVQPFSSEV-NVAALEAEL-VARGGTPTGPAIDHAADLLL 226 (242)
T ss_dssp TTHHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSCEEEEEEESSC-CHHHHHHHC-CCCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccceeecCCCCChH-HHHHHHhhC-CCCCCCcHHHHHHHHHHHHH
Confidence 48999999999999886555579999999997543 5555 4998887 544556554 56899999999999999985
No 39
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=96.51 E-value=0.039 Score=58.13 Aligned_cols=82 Identities=11% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeC-CCCCCcc------------------------cHH-HHHHHHHhc
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA-LSTCDPG------------------------DIM-ETIQKCKES 117 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS-~~t~d~g------------------------~i~-~ti~~akk~ 117 (324)
...++.++.||+.|+..|+... .--+|++|.++ +.+.-|| +.. +.++.+.++
T Consensus 285 ~~~~t~~g~al~aa~~~l~~~~--~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~sdke~~~~~~a~~fY~~la~~~~~~ 362 (766)
T 3eh2_A 285 RETETVFVPVIQAGMEALKAAE--CAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQ 362 (766)
T ss_dssp CCCCCCSHHHHHHHHHHHHHTT--CCEEEEEEECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHhccCC--CCcEEEEEecCCCCcCCCcccccccccccCCCcchhhhccchHHHHHHHHHHHHhC
Confidence 4567889999999999998642 23579999877 4432222 233 578899999
Q ss_pred CcEEEEEEccch---HHHHHHHHHhhCCeeEEe
Q 020564 118 KIRCSVIGLSAE---MFICKHLCQDTGGSYSVA 147 (324)
Q Consensus 118 ~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~va 147 (324)
+|-||+..++.+ +..++.+++.|||.-+.-
T Consensus 363 ~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y 395 (766)
T 3eh2_A 363 GCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKY 395 (766)
T ss_dssp TEEEEEEECCSSCCCHHHHTHHHHHTTCCEEEC
T ss_pred CeEEEEEEecCCCcChHHHHHHHhhcCceEEEe
Confidence 999999999854 789999999999976544
No 40
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=96.48 E-value=0.078 Score=55.87 Aligned_cols=82 Identities=12% Similarity=0.163 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeC-CCCCCcc------------------------cHH-HHHHHHHhc
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSA-LSTCDPG------------------------DIM-ETIQKCKES 117 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS-~~t~d~g------------------------~i~-~ti~~akk~ 117 (324)
...++.++.||+.|+..|+... .--+|++|.++ +.+.-|| +.. +.+..+.++
T Consensus 289 ~~~~t~~g~al~aa~~~l~~~~--~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~t~ke~~~~~~a~~fY~~lA~~~~~~ 366 (770)
T 3efo_B 289 NENETVFAPVIQAGMEALKAAD--CPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAH 366 (770)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHT--CCEEEEEEECSCCCSSSTTCCCCCCCCCCSSCSCGGGGGSCSSSHHHHHHHHHHHT
T ss_pred CCCcchHHHHHHHHHHHhccCC--CCcEEEEEecCCCCcCCCccccccccccccCCcchhhhhcchHHHHHHHHHHHHHc
Confidence 3467889999999999998532 13479999877 4432333 233 578899999
Q ss_pred CcEEEEEEccch---HHHHHHHHHhhCCeeEEe
Q 020564 118 KIRCSVIGLSAE---MFICKHLCQDTGGSYSVA 147 (324)
Q Consensus 118 ~IrV~vI~Lgae---~~iLk~ia~~TgG~Y~va 147 (324)
+|-||+..++.+ +..++.+++.|||.-+.-
T Consensus 367 ~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y 399 (770)
T 3efo_B 367 GCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKY 399 (770)
T ss_dssp TEEEEEEECCSSCCCHHHHTHHHHHTTCCEEEC
T ss_pred CeEEEEEEecCCccChHHHHHHHhhcCceEEEe
Confidence 999999999864 789999999999975544
No 41
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=95.45 E-value=0.28 Score=51.12 Aligned_cols=139 Identities=9% Similarity=0.021 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee-----------------------------eEeecCCCCHHHHHHHH
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA-----------------------------NCLTDLGGSPESHIKAL 58 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a-----------------------------~~l~~lt~n~~~~~~~L 58 (324)
|+.+++....++++.-..-..-|||+++|.|+.. ..+.+||.|..+..+.+
T Consensus 128 i~~lk~l~~~l~~~l~~~t~~~r~Gfgsf~Dk~~~P~~~~~p~~~~~~pc~~~~~~c~~~f~f~~~l~lt~~~~~f~~~v 207 (690)
T 3fcs_B 128 LWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEV 207 (690)
T ss_dssp HHHTTTTTHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCSTTTTTCTTSSSSSCCCCCCSEEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcCceEEeEEeeccccCCccccChhhhccCCCcCCCCCCCCCccceeecccCCCHHHHHHHh
Confidence 4444555555655544445678999999988431 12368899999999999
Q ss_pred hhhcCCCCc----chHHHHHHHHH---HHhhCCCCCCCceEEEEEeCCCCC-----------------------------
Q 020564 59 MGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALSTC----------------------------- 102 (324)
Q Consensus 59 ~~~~~~~G~----~sL~naL~~A~---~~L~~~p~~~~reILil~gS~~t~----------------------------- 102 (324)
.+.. ..|+ -+--.||..|+ ..+.=+ ...+|+|||++.....
T Consensus 208 ~~~~-isgn~D~PE~g~dAl~qa~~c~~~igWr--~~a~rllv~~TDa~~H~agDg~l~gi~~pnd~~chl~~~~~y~~s 284 (690)
T 3fcs_B 208 KKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWR--NDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSAS 284 (690)
T ss_dssp TTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCC--SSSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTCBBGGG
T ss_pred hcee-ccCCCCCCchHHHHHHHHhhcccccCCC--CCceEEEEEECCCccccCCCccccceecCCCcceeecCCCccccc
Confidence 8653 2221 12234555444 334333 2467899988633211
Q ss_pred ---CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEEeCC
Q 020564 103 ---DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALD 149 (324)
Q Consensus 103 ---d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~va~d 149 (324)
|...+.+..++|++++|.+....-.....+.+++++...|.+.-.+.
T Consensus 285 ~~~DypSi~ql~~~l~~~~i~~ifavt~~~~~~y~~l~~~i~~s~v~~l~ 334 (690)
T 3fcs_B 285 TTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLS 334 (690)
T ss_dssp GTSCCCCHHHHHHHHHHTTCEEEEEEEGGGHHHHHHHHHHSTTCEEEEEC
T ss_pred cccCCCCHHHHHHHHHHcCCeEEEEEeCCchhhHHHHHhhcCCceeeeec
Confidence 22247788999999999877776667778999999888777644433
No 42
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=93.93 E-value=0.089 Score=54.80 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee----------------------------eEeecCCCCHHHHHHHHh
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------------------------NCLTDLGGSPESHIKALM 59 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a----------------------------~~l~~lt~n~~~~~~~L~ 59 (324)
|+.+++....++++.-..-..-|||+.+|+|+.. ..+.+||.|..+..+.+.
T Consensus 121 i~~lk~l~~~l~~~l~~~t~~~r~GfgsFvDk~~~P~~~~~p~~~~~Pc~~~~~~c~~~f~f~~~l~lt~~~~~F~~~v~ 200 (687)
T 3k6s_B 121 LRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVG 200 (687)
T ss_dssp HHTTTTCCTTHHHHHHSSCCSCEEEEEEECCCSSTTSSCCSSTTTTCCCCSCCCCCCCCCSCEEEEEEESCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcCcEEeeEEeeccccCCccccCchhccCCCCCCCCCcCCcccceeecccCCCHHHHHHHHh
Confidence 3444445556666655566789999999988421 124578999999999998
Q ss_pred hhcCCCC-----cchHHHHHHHHH---HHhhCCCCCCCceEEEEEeCCCCC-----------------------------
Q 020564 60 GKLGCSG-----DSSLQNALDLVQ---GLLSQIPSYGHREVLILYSALSTC----------------------------- 102 (324)
Q Consensus 60 ~~~~~~G-----~~sL~naL~~A~---~~L~~~p~~~~reILil~gS~~t~----------------------------- 102 (324)
+.. .+| |..| .||..|+ ..+.=+ + .+|+|||++.....
T Consensus 201 ~~~-isgn~D~PE~g~-dAl~qa~vc~~~igWr-~--a~rllV~~TDa~~H~agDg~l~gi~~pndg~Chl~~~~y~~s~ 275 (687)
T 3k6s_B 201 KQL-ISGNLDAPEGGL-DAMMQVAACPEEIGWR-N--VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSN 275 (687)
T ss_dssp TSC-CCCCSSSSCCHH-HHHHHHTTCHHHHCCC-S--SCCEEEEECSSCCCCTTGGGGGTCCCCCCSCCCCSSSBCSSGG
T ss_pred hcc-ccCCCCCCchHH-HHHHHHhhcccccCCc-c--ceEEEEEECCCccccCCCccccceecCCCCccccCCCcccccc
Confidence 653 111 1133 4444444 334333 2 67799988632211
Q ss_pred --CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEEeCCHH
Q 020564 103 --DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDES 151 (324)
Q Consensus 103 --d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~va~d~~ 151 (324)
|.-.+.+..++|++++|.+-...-.....+.+++++.-+|.+...+.++
T Consensus 276 ~~DyPS~~ql~~~l~~~~I~~ifavt~~~~~~y~~l~~~i~~s~v~~L~~d 326 (687)
T 3k6s_B 276 EFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSED 326 (687)
T ss_dssp GSCCCCGGGHHHHHHHTTCBCCEEECGGGHHHHHHHHHHSSSCCEEECCTT
T ss_pred ccCCCCHHHHHHHHHHcCCeEEEEEeccchhhHHHHHhhcCCceeeeeccc
Confidence 2223667899999999988777777778899999988887775555544
No 43
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=92.47 E-value=0.11 Score=39.47 Aligned_cols=41 Identities=17% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 255 NDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 255 ~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
.|........|..|.++|.-. .-++-|-.|+++||.+|-.+
T Consensus 14 ~W~pd~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 14 YWQEDEDAPACNGCGCVFTTT----VRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCCCTTTCCBCTTTCCBCCTT----SCCEECTTTCCEECTGGGCC
T ss_pred ccccCCCCCCCcCcCCccccc----hhcccccCCCcEEChHHhCC
Confidence 455555667899999999632 23688999999999999754
No 44
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=92.03 E-value=0.11 Score=39.38 Aligned_cols=40 Identities=20% Similarity=0.473 Sum_probs=29.5
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 256 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 256 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
|........|..|..+|.-. .-++-|-.|+.+||.+|-.+
T Consensus 13 W~~d~~~~~C~~C~~~Fs~~----~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 13 WLKDDEATHCRQCEKEFSIS----RRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp --CCCCCCBCTTTCCBCBTT----BCCEECTTTCCEECSGGGCE
T ss_pred cccCccCCcccCcCCcccCc----cccccCCCCCCEEChHHhCC
Confidence 43344566899999999632 23578999999999999764
No 45
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.92 E-value=0.14 Score=38.93 Aligned_cols=40 Identities=20% Similarity=0.559 Sum_probs=30.1
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 256 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 256 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
|.+......|..|.++|.-. .-+.-|-.|+++||..|-.+
T Consensus 8 W~pd~~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 8 RYPTNNFGNCTGCSATFSVL----KKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp SCSCCCCSSCSSSCCCCCSS----SCCEECSSSCCEECTTTSCE
T ss_pred cccCCCCCcCcCcCCccccc----hhhhhhcCCCcEEChhhcCC
Confidence 44444566899999999532 23678999999999999653
No 46
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.39 E-value=0.14 Score=39.59 Aligned_cols=87 Identities=24% Similarity=0.494 Sum_probs=58.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 266 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~ 266 (324)
.|.|+.|...|- +-|-.|+.|+..+.+...|.+-. ||.-. ....-.|.
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~----------------~~~~~~C~ 70 (124)
T 2dlq_A 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR----------------SEQVFTCS 70 (124)
T ss_dssp SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS----------------CCCCEECS
T ss_pred CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC----------------CCCCeECC
Confidence 789999987765 34678999999999888887642 22100 01234688
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhhc-CC
Q 020564 267 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHES-LH 305 (324)
Q Consensus 267 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCd~fihe~-lh 305 (324)
-|.+.|..... .....|.|+.|+..|=..=++-.|.. .|
T Consensus 71 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 118 (124)
T 2dlq_A 71 VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118 (124)
T ss_dssp SSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence 89888865320 12235899999998877777777753 44
No 47
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=91.30 E-value=0.3 Score=35.48 Aligned_cols=56 Identities=21% Similarity=0.520 Sum_probs=38.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc--CCCCCCCCCC-CCCCCcccCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES--LHNCPGCESL-RHSNPIVANE 323 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~--lh~CpgC~~~-~~~~~~~~~~ 323 (324)
....|.-|...|.++ ..-+.|++.||.+|=.-.-+. ...||-|... ...+.++.|.
T Consensus 14 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~ 72 (74)
T 2yur_A 14 DELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSGPS 72 (74)
T ss_dssp GGGSCSSSCCCCTTC-------EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTCTT
T ss_pred CCCCCcCCChHHhCC-------eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccccCC
Confidence 345799998777543 345669999999995443332 3689999874 4566666664
No 48
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.18 E-value=0.24 Score=35.69 Aligned_cols=55 Identities=20% Similarity=0.500 Sum_probs=39.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCcccC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~~~ 322 (324)
....|.-|...+.++ ..-..|++.||.+|=.-.-+.-..||-|........+..|
T Consensus 14 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 68 (72)
T 2djb_A 14 PYILCSICKGYLIDA-------TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSG 68 (72)
T ss_dssp GGGSCTTTSSCCSSC-------EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCC
T ss_pred CCCCCCCCChHHHCc-------CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccccc
Confidence 345799998777542 3456899999999965544556899999876665555444
No 49
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=91.13 E-value=0.13 Score=39.73 Aligned_cols=40 Identities=23% Similarity=0.419 Sum_probs=29.9
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 256 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 256 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
|........|..|..+|.-- .-++-|..|+.+||.+|-.+
T Consensus 14 W~~d~~~~~C~~C~~~F~~~----~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 14 WVPDSEAPNCMNCQVKFTFT----KRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp CCCGGGCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred CcccccCCcCcCCCCcccch----hhCccccCCCCEECCcccCC
Confidence 33333456899999999632 23688999999999999764
No 50
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=90.82 E-value=0.27 Score=33.23 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=35.0
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 312 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~ 312 (324)
...|.-|...+.... ....-+.|++.||.+|-.-.-+.-..||-|..
T Consensus 5 ~~~C~IC~~~~~~~~----~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDGE----EARFLPRCGHGFHAECVDMWLGSHSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTTS----CCEECSSSCCEECTTHHHHTTTTCCSCSSSCC
T ss_pred CCcCccCCccccCCC----ceEECCCCCCcccHHHHHHHHHcCCcCcCCCC
Confidence 457999997775422 23457789999999997655566789999964
No 51
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=90.46 E-value=0.15 Score=41.75 Aligned_cols=35 Identities=23% Similarity=0.632 Sum_probs=28.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
....|..|..+|.-. .-++-|-.|+.+||..|-.+
T Consensus 68 ~~~~C~~C~~~Fs~~----~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 68 EVQNCMACGKGFSVT----VRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GCCBCTTTCCBCCSS----SCCEECTTTCCEECGGGSCE
T ss_pred CCCCCcCcCCccccc----cccccCCCCCeEEChHHhCC
Confidence 456899999999632 23688999999999999765
No 52
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=90.26 E-value=0.61 Score=33.83 Aligned_cols=57 Identities=21% Similarity=0.340 Sum_probs=39.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCcccC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~~~ 322 (324)
....|.-|+..|..+. ...--.|++.||.+|-.-.-+.-..||-|........+..|
T Consensus 14 ~~~~C~IC~~~~~~~~-----~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 70 (78)
T 2ect_A 14 SGLECPVCKEDYALGE-----SVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATN 70 (78)
T ss_dssp SSCCCTTTTSCCCTTS-----CEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCCC
T ss_pred CCCCCeeCCccccCCC-----CEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccCCC
Confidence 4568999997775432 12222499999999987655666899999876555444433
No 53
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=90.01 E-value=0.42 Score=34.88 Aligned_cols=53 Identities=28% Similarity=0.501 Sum_probs=36.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc------CCCCCCCCCCCCCCCccc
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVA 321 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~------lh~CpgC~~~~~~~~~~~ 321 (324)
....|.-|...+.++ ..- .|++.||.+|-.-.-+. -..||-|........+..
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 76 (85)
T 2ecw_A 18 EEVTCPICLELLKEP-------VSA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKP 76 (85)
T ss_dssp TTTSCTTTCSCCSSC-------EEC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEE
T ss_pred cCCCCcCCChhhCcc-------eeC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCc
Confidence 355899999777543 233 49999999997543333 678999987655444433
No 54
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=89.85 E-value=0.068 Score=45.08 Aligned_cols=90 Identities=28% Similarity=0.602 Sum_probs=50.9
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 266 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~ 266 (324)
.|.|+.|+..|- +-|-.|+.|+..+.+...|.+-. |+- - ..-.|.
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~ 109 (190)
T 2i13_A 49 PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG--E-----------------KPYACP 109 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT--C-----------------CCEECT
T ss_pred CccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCC--C-----------------CCCcCC
Confidence 577777776554 23456777777777777665432 221 0 122466
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhhcCC------CCCCCC
Q 020564 267 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLH------NCPGCE 311 (324)
Q Consensus 267 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCd~fihe~lh------~CpgC~ 311 (324)
.|.+.|..... .....|.|+.|+..|=..=++-.|...| .|+.|.
T Consensus 110 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~ 168 (190)
T 2i13_A 110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168 (190)
T ss_dssp TTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCC
Confidence 67666654210 0122477777777776666666664433 466665
No 55
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.62 E-value=0.34 Score=35.69 Aligned_cols=73 Identities=18% Similarity=0.347 Sum_probs=48.6
Q ss_pred CCCCCCCCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCceeeCC
Q 020564 216 LPTDCRICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVACP 286 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLarsyh-hl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C~ 286 (324)
-|-.|+.|+..+.+...|.+-.. |. .. ..-.|..|.+.|.... -.....|.|+
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 68 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHT-GV-----------------KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCC-CC-----------------CSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcC-CC-----------------CCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence 34567788888888877765422 11 00 1235888887776431 0122359999
Q ss_pred CCCcccccccchhhhhcCCC
Q 020564 287 KCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 287 ~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+..|=..=++..|...|.
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~ 88 (96)
T 2dmd_A 69 ICPYASRNSSQLTVHLRSHT 88 (96)
T ss_dssp SSSCEESSHHHHHHHHTTCC
T ss_pred CCCCccCCHHHHHHHHHHhc
Confidence 99999998888888988774
No 56
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=89.57 E-value=14 Score=36.54 Aligned_cols=135 Identities=9% Similarity=0.021 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee-----------------------------eEeecCCCCHHHHHHHH
Q 020564 8 MAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA-----------------------------NCLTDLGGSPESHIKAL 58 (324)
Q Consensus 8 l~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a-----------------------------~~l~~lt~n~~~~~~~L 58 (324)
++.+++....+.++.-..-..-|||+.+|.|+.. ..+.+||.|..+..+.+
T Consensus 128 l~~lk~lg~~L~~~l~~~t~~~riGfgsFvDk~v~P~~~~~p~~~l~nPc~~~~~~c~p~f~fr~~l~LT~d~~~F~~~V 207 (472)
T 3t3p_B 128 LWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEV 207 (472)
T ss_dssp HHHTTTHHHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCSHHHHHCTTTTTTSCCCCCCSEEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeccccCccccCChhhhhcCCCcccccCCCCCcceeEeeccCCCHHHHHHHH
Confidence 4555666677777765667788999999998621 12568899999999988
Q ss_pred hhhcCCCCc----chHHHHHHHHH---HHhhCCCCCCCceEEEEEeCCC-------------------------------
Q 020564 59 MGKLGCSGD----SSLQNALDLVQ---GLLSQIPSYGHREVLILYSALS------------------------------- 100 (324)
Q Consensus 59 ~~~~~~~G~----~sL~naL~~A~---~~L~~~p~~~~reILil~gS~~------------------------------- 100 (324)
.+.. .+|+ -+--.||..|. ..+.=++ ..+|+|||++...
T Consensus 208 ~~~~-iSGn~D~PEgg~dAl~qaavC~~~igWR~--~a~rllV~~TDa~~H~agDgkL~GIv~pnDg~CHL~~~~~Y~~s 284 (472)
T 3t3p_B 208 KKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWRN--DASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSAS 284 (472)
T ss_dssp HHCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCCS--SSEEEEEEEESSCBCCTTGGGGGTCCCCCCCCCCBCTTCBBTTT
T ss_pred hhcc-ccCCCCCCchHHHHHHHHhcchhhcCCCC--CceEEEEEECCCCcCcCCCccccceecCCCCceEECCCCccccc
Confidence 8642 1111 12234554444 2333332 4577888875221
Q ss_pred -CCCcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeE
Q 020564 101 -TCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYS 145 (324)
Q Consensus 101 -t~d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~ 145 (324)
.-|.-.+-+..++|.++||.+-.-.-.....+.+++++.-.|...
T Consensus 285 ~~~DYPSv~ql~~~l~e~nI~~IFAVt~~~~~~Y~~L~~~ip~s~v 330 (472)
T 3t3p_B 285 TTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTV 330 (472)
T ss_dssp TTSCCCCHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTSTTCEE
T ss_pred ccCCCCCHHHHHHHHHhcCccEEEEEeccchhHHHHHHHhCCCcee
Confidence 113335778899999999875443333445788999988777653
No 57
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=89.31 E-value=0.16 Score=39.39 Aligned_cols=52 Identities=27% Similarity=0.609 Sum_probs=38.1
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcC-CCCCCCCCCCCCCCccc
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL-HNCPGCESLRHSNPIVA 321 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~l-h~CpgC~~~~~~~~~~~ 321 (324)
..|.-|+..|.+ ...|..|++.||.+|=.-.-+.- ..||-|-.......++.
T Consensus 23 ~~C~IC~~~~~~-------p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~ 75 (100)
T 3lrq_A 23 FRCFICMEKLRD-------ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 75 (100)
T ss_dssp TBCTTTCSBCSS-------EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEE
T ss_pred CCCccCCccccC-------ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHh
Confidence 479999977754 35678999999999976544444 69999987655444443
No 58
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=89.21 E-value=11 Score=37.22 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCe---------------------------eeEeecCCCCHHHHHHHHh
Q 020564 7 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGV---------------------------ANCLTDLGGSPESHIKALM 59 (324)
Q Consensus 7 Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~---------------------------a~~l~~lt~n~~~~~~~L~ 59 (324)
-++-+++....+.++.-..-..-|||+.+|.|+. ...+.+||.|..+..+.+.
T Consensus 138 dl~~lk~lg~~L~~~l~~~t~~~riGfGsFvDK~v~P~~~t~p~~~~nPC~~~~~c~~~f~fr~~l~LT~d~~~F~~~V~ 217 (454)
T 3vi3_B 138 DLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTTPFSYKNVLSLTNKGEVFNELVG 217 (454)
T ss_dssp HHHHHTTHHHHHHHHHTTTCSSEEEEEEEECCCSSTTTSCCSTTTTTCCSCSSSCCCCCCSEEEEEEEESCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeccccCCcccCChHHhcCCCcCccCCCCCcceeeeeecCCCHHHHHHHHh
Confidence 3555666677777776666778899999998862 0126788999999999998
Q ss_pred hhcC------CCCcchHHHHHHHHHH---HhhCCCCCCCceEEEEEeCCC------------------------------
Q 020564 60 GKLG------CSGDSSLQNALDLVQG---LLSQIPSYGHREVLILYSALS------------------------------ 100 (324)
Q Consensus 60 ~~~~------~~G~~sL~naL~~A~~---~L~~~p~~~~reILil~gS~~------------------------------ 100 (324)
+..- |+| .| .||..|.- .+. ..+ .+++|||.+...
T Consensus 218 ~~~isGn~D~PEg--g~-DAl~Qaavc~~~ig-WR~--a~rllV~~TDa~fH~agDgkL~GIv~PNDg~CHL~~~~Yt~s 291 (454)
T 3vi3_B 218 KQRISGNLDSPEG--GF-DAIMQVAVCGSLIG-WRN--VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNMYTMS 291 (454)
T ss_dssp TCCCCCCSSSSBC--HH-HHHHHHHHCHHHHT-CCS--SEEEEEEEESSCBCCTTTTGGGTCCSCCCCCCCEETTEECCT
T ss_pred hccccCCCcCCch--hH-HHHHHHhccccccC-Ccc--ceEEEEEECCCCcCcCCCccccceecCCCCccEeCCCccccc
Confidence 6421 223 23 34443332 233 332 678888875221
Q ss_pred -CCCcccHHHHHHHHHhcCcEEEEEEccc-hHHHHHHHHHhhCCeeEEeCC
Q 020564 101 -TCDPGDIMETIQKCKESKIRCSVIGLSA-EMFICKHLCQDTGGSYSVALD 149 (324)
Q Consensus 101 -t~d~g~i~~ti~~akk~~IrV~vI~Lga-e~~iLk~ia~~TgG~Y~va~d 149 (324)
.-|.-.|-+..+++.++||.+= .++.. ...+.+++++.-.|...-.+.
T Consensus 292 ~~~DYPSv~ql~~~l~e~nI~~I-FAVt~~~~~~Y~~L~~~ip~s~vg~Ls 341 (454)
T 3vi3_B 292 HYYDYPSIAHLVQKLSENNIQTI-FAVTEEFQPVYKELKNLIPKSAVGTLS 341 (454)
T ss_dssp TTSCCCCHHHHHHHHHHTTEEEE-EEEEGGGHHHHHHHHHHSTTEEEEEEC
T ss_pred ccCCCCCHHHHHHHHHhcCCcEE-EEEcCccchHHHHHHHhCCCceeeEcc
Confidence 1244467889999999999753 33333 457899999988887644333
No 59
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=89.13 E-value=0.26 Score=40.05 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=27.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|+..|- +-|-.|+.|+..+.+...|.+-
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 69 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH 69 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh
Confidence 599999998776 3456899999999988888653
No 60
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.44 E-value=0.46 Score=34.37 Aligned_cols=50 Identities=18% Similarity=0.386 Sum_probs=36.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
....|.-|+..|..+. .+..-.|++.||.+|-.-.-+.-..||-|.....
T Consensus 22 ~~~~C~IC~~~~~~~~-----~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQ-----LLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTC-----EEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCC-----eEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 4568999998875431 2344459999999998766666689999976443
No 61
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=88.05 E-value=0.59 Score=35.04 Aligned_cols=47 Identities=28% Similarity=0.672 Sum_probs=33.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhh-cCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHE-SLHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~-fihe-~lh~CpgC~~~~ 314 (324)
....|.-|...|.++ ..-+.|++.||.+|=. ++.+ .-..||-|....
T Consensus 12 ~~~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDA-------VVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSC-------EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCc-------eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 456899999777643 3456699999999953 3322 336999998653
No 62
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.87 E-value=0.98 Score=32.81 Aligned_cols=54 Identities=26% Similarity=0.522 Sum_probs=36.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc------CCCCCCCCCCCCCCCcccC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES------LHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~------lh~CpgC~~~~~~~~~~~~ 322 (324)
....|.-|...+.++ ..- .|++.||.+|-.-.-+. -..||.|........+..|
T Consensus 18 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecv_A 18 EEVTCPICLELLTQP-------LSL-DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 77 (85)
T ss_dssp CCCCCTTTCSCCSSC-------BCC-SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCS
T ss_pred CCCCCCCCCcccCCc-------eeC-CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCcc
Confidence 456899999777543 122 69999999997644333 7799999875554444333
No 63
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=87.82 E-value=0.26 Score=33.51 Aligned_cols=24 Identities=33% Similarity=0.881 Sum_probs=20.9
Q ss_pred eeEcCCCCcccc----------cCCC--CCCCCCce
Q 020564 203 GYTCPRCKARVC----------ELPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C----------~lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|= ++|- .||+||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 599999999996 6887 89999964
No 64
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=87.82 E-value=0.27 Score=37.07 Aligned_cols=43 Identities=26% Similarity=0.577 Sum_probs=29.7
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhhcCCC
Q 020564 264 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 264 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.-|.+.|.... -.....|+|+.|+..|=..=++..|...|.
T Consensus 47 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~ 97 (106)
T 2ee8_A 47 TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97 (106)
T ss_dssp BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence 4777776665321 011235899999999988888888887774
No 65
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.63 E-value=0.32 Score=37.45 Aligned_cols=78 Identities=19% Similarity=0.437 Sum_probs=55.5
Q ss_pred CCCCCCCCCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC-----------CCCCce
Q 020564 216 LPTDCRICGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG-----------NKPGLY 282 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars--yhhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~-----------~~~~~~ 282 (324)
-|-.|+.|+..+.+...|.+- .|+- . ..-.|.-|.+.|.... ......
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~ 66 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTG--E-----------------KPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSS--C-----------------CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCC--C-----------------CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC
Confidence 466899999999999888763 2321 0 1235888988886431 122346
Q ss_pred eeCCCCCcccccccchhhhhcCC------CCCCCCC
Q 020564 283 VACPKCKKHFCLECDIYIHESLH------NCPGCES 312 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fihe~lh------~CpgC~~ 312 (324)
|.|+.|+..|=..=++-.|...| .|+.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 102 (124)
T 2dlq_A 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence 99999999998888888886654 5888864
No 66
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=86.94 E-value=0.53 Score=34.21 Aligned_cols=41 Identities=27% Similarity=0.635 Sum_probs=29.0
Q ss_pred CCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 259 NRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 259 ~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
......|..|.+.+.- ..|+| +|+..||..=- |-.-|+|++
T Consensus 12 ~~~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~HR---~~e~H~C~f 52 (64)
T 1wg2_A 12 VRPNNRCFSCNKKVGV------MGFKC-KCGSTFCGSHR---YPEKHECSF 52 (64)
T ss_dssp SCCSCSCTTTCCCCTT------SCEEC-TTSCEECSSSC---SSTTTTCCC
T ss_pred CCcCCcChhhCCcccc------cCeEe-ecCCEecccCC---CccccCCCc
Confidence 3456789999976532 15999 99999998633 345777775
No 67
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.83 E-value=0.24 Score=41.65 Aligned_cols=84 Identities=29% Similarity=0.570 Sum_probs=60.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF 266 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~ 266 (324)
.|.|+.|+..|- +-|-.|+.|+..+.+.-.|.+-. |+- + ..-.|.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------~------------~~~~C~ 137 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-------E------------KPYKCP 137 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-------C------------CCEECT
T ss_pred CccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-------C------------CCeECC
Confidence 699999988764 35678999999999988887532 221 0 123599
Q ss_pred cccccccCCCC--------CCCceeeCCCCCcccccccchhhhhcCC
Q 020564 267 GCQQSLLSSGN--------KPGLYVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 267 ~C~~~~~~~~~--------~~~~~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.+.|..... .....|.|+.|+..|=..=++-.|...|
T Consensus 138 ~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H 184 (190)
T 2i13_A 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184 (190)
T ss_dssp TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhc
Confidence 99988875420 1223699999999998777777777666
No 68
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=86.51 E-value=0.44 Score=35.11 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=26.2
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccch
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI 298 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~ 298 (324)
..|..|+++|.-. ..++-|-.|+++||.+|-.
T Consensus 12 ~~C~~C~~~F~~~----~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLL----NRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECGGGSC
T ss_pred CcccCCCCccCCc----cccccCCCCCEEEcccccC
Confidence 4799999999632 2368899999999999974
No 69
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=86.30 E-value=1 Score=30.18 Aligned_cols=48 Identities=19% Similarity=0.334 Sum_probs=34.7
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 313 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~ 313 (324)
...|.-|...+.+.+ ....-..|++.||.+|-.-.-+.-..||-|...
T Consensus 5 ~~~C~IC~~~~~~~~----~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSR----VVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTT----SCEEECTTSCEEETTHHHHHHHHTCCCTTSCCS
T ss_pred CCcCcccChhhcCCC----cCeEecCCCCcccHHHHHHHHHcCCcCCCCCCc
Confidence 457999997775321 134566799999999976555555899999654
No 70
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=86.26 E-value=0.13 Score=40.97 Aligned_cols=91 Identities=18% Similarity=0.466 Sum_probs=55.3
Q ss_pred EcCCCCcccccCCCCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceee
Q 020564 205 TCPRCKARVCELPTDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVA 284 (324)
Q Consensus 205 ~Cp~C~s~~C~lP~~C~~C~l~Lvs~~hLarsyhhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~ 284 (324)
.|-.|....-+-...||+|+..+-.. .++.+ |.. .....|..|...|..+... .....
T Consensus 36 fc~~Ci~~~~~~~~~CP~Cr~~~~~~-----~l~~l-----~i~-----------~~~~~C~iC~~~~~~~~~~-~~~~~ 93 (133)
T 4ap4_A 36 FCSQCLRDSLKNANTCPTCRKKINHK-----RYHPI-----YIG-----------SGTVSCPICMDGYSEIVQN-GRLIV 93 (133)
T ss_dssp EEHHHHHHHHTTCSBCTTTCCBCTTT-----CEEEC-----BCS-----------SSSCBCTTTCCBHHHHHHT-TCCEE
T ss_pred hhHHHHHHHHHhCCCCCCCCCcCccc-----ccccc-----ccC-----------CCCCCCCCCCCcccccccc-CcceE
Confidence 34444443334566899998876321 11221 111 1345799999777542100 01235
Q ss_pred CCCCCcccccccchhhhhcCCCCCCCCCCCCCC
Q 020564 285 CPKCKKHFCLECDIYIHESLHNCPGCESLRHSN 317 (324)
Q Consensus 285 C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~ 317 (324)
...|++.||.+|-.=-.+.-..||-|.......
T Consensus 94 ~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 94 STECGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp EETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred eCCCCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 668999999999776667778999998755443
No 71
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=85.97 E-value=0.36 Score=36.91 Aligned_cols=50 Identities=18% Similarity=0.418 Sum_probs=36.1
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCc
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 319 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~ 319 (324)
..|.-|...|.++ ...+.|++.||.+|=.-.-+.-..||.|........+
T Consensus 23 ~~C~IC~~~~~~p-------~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l 72 (99)
T 2y43_A 23 LRCGICFEYFNIA-------MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDL 72 (99)
T ss_dssp TBCTTTCSBCSSE-------EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred CCcccCChhhCCc-------CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhC
Confidence 4799999777542 3456899999999965555555799999875543333
No 72
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=85.55 E-value=0.34 Score=39.55 Aligned_cols=46 Identities=24% Similarity=0.683 Sum_probs=31.2
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 311 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~ 311 (324)
...|.+|..+|.-. .-+.-|-.|+++||..|--.--.....|-.|-
T Consensus 19 ~~~C~~C~~~Fs~~----~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~ 64 (120)
T 1y02_A 19 EPSCKSCGAHFANT----ARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 64 (120)
T ss_dssp -CCCTTTCCCCSSG----GGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred cCcccCcCCccccc----cccccCCCCCCeeCHHHhCCCCCCceECHHHH
Confidence 34799999999632 23578999999999999765444455565553
No 73
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=85.51 E-value=0.75 Score=35.24 Aligned_cols=47 Identities=23% Similarity=0.646 Sum_probs=33.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh-------hhcCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-------HESLHNCPGCE 311 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fi-------he~lh~CpgC~ 311 (324)
....|..|..+|.-. .-+.-|-.|+.+||.+|-.+- .+....|-.|.
T Consensus 8 ~~~~C~~C~~~F~~~----~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~ 61 (88)
T 1wfk_A 8 MESRCYGCAVKFTLF----KKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCH 61 (88)
T ss_dssp CCSBCTTTCCBCCSS----SCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHH
T ss_pred cCCCCcCcCCcccCc----cccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHH
Confidence 345899999999632 236789999999999997641 23445555553
No 74
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=84.88 E-value=0.9 Score=34.84 Aligned_cols=40 Identities=23% Similarity=0.520 Sum_probs=29.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|+.|.+.+.- ...|+| +|+..||..= =|-.-|+|++
T Consensus 24 ~~~rC~~C~kkvgl-----~~~f~C-rCg~~FC~~H---Ry~e~H~C~f 63 (85)
T 1wff_A 24 IMKHCFLCGKKTGL-----ATSFEC-RCGNNFCASH---RYAEAHGCNY 63 (85)
T ss_dssp CCCBCSSSCCBCSS-----SSCEEC-TTCCEECTTT---CSTGGGTCCS
T ss_pred cCccchhhCCeecc-----cCCeEc-CCCCEecccC---CCccCCCCcc
Confidence 45689999976642 125999 5999999763 2447899987
No 75
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.76 E-value=1.3 Score=31.60 Aligned_cols=49 Identities=24% Similarity=0.441 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
....|.-|+..|..+. ..... .|++.||.+|-.-.-+.-..||-|....
T Consensus 14 ~~~~C~IC~~~~~~~~----~~~~~-~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRD----ELGIC-PCKHAFHRKCLIKWLEVRKVCPLCNMPV 62 (74)
T ss_dssp CSCBCSSSCCBCCSSS----CEEEE-TTTEEEEHHHHHHHHHHCSBCTTTCCBC
T ss_pred CCCCCcCCCcccCCCC----cEEEc-CCCCEecHHHHHHHHHcCCcCCCcCccc
Confidence 4568999998875432 12223 4999999999765555667999997643
No 76
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=84.67 E-value=0.93 Score=32.72 Aligned_cols=52 Identities=19% Similarity=0.387 Sum_probs=35.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc-------CCCCCCCCCCCCCCCcc
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-------LHNCPGCESLRHSNPIV 320 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~-------lh~CpgC~~~~~~~~~~ 320 (324)
....|.-|...|.++. .- .|++.||.+|=.-.-+. -..||-|........+.
T Consensus 11 ~~~~C~IC~~~~~~p~-------~l-~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~ 69 (79)
T 2egp_A 11 EEVTCPICLELLTEPL-------SL-DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69 (79)
T ss_dssp CCCEETTTTEECSSCC-------CC-SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGG
T ss_pred cCCCCcCCCcccCCee-------EC-CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCC
Confidence 4568999998876431 12 69999999996532222 67899998755544443
No 77
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=84.62 E-value=1 Score=31.72 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=34.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
....|.-|...|.... ....-.|++.||.+|-.-.-+.-..||-|....
T Consensus 13 ~~~~C~IC~~~~~~~~-----~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~ 61 (69)
T 2kiz_A 13 TEEKCTICLSILEEGE-----DVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 61 (69)
T ss_dssp CCCSBTTTTBCCCSSS-----CEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBS
T ss_pred CCCCCeeCCccccCCC-----cEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccc
Confidence 4568999987774321 233446999999999765555567899997643
No 78
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=84.48 E-value=0.86 Score=34.03 Aligned_cols=39 Identities=21% Similarity=0.538 Sum_probs=28.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|+.|.+.+.- ..|+| +|+..||.. --|-.-|+|++
T Consensus 24 ~~~RC~~C~kkvgL------~~f~C-rCg~~FCs~---HRy~e~H~C~f 62 (74)
T 1wfp_A 24 TATRCLSCNKKVGV------TGFKC-RCGSTFCGT---HRYPESHECQF 62 (74)
T ss_dssp CCCBCSSSCCBCTT------TCEEC-TTSCEECTT---TCSTTTSCCCS
T ss_pred cCccchhhcCcccc------cceEe-ccCCEeccc---cCCCcCCCCcC
Confidence 45689999876642 15999 899999975 33455777765
No 79
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=84.02 E-value=0.44 Score=40.95 Aligned_cols=24 Identities=38% Similarity=0.919 Sum_probs=20.7
Q ss_pred eeEcCCCCcccc-cCCCCCCCCCce
Q 020564 203 GYTCPRCKARVC-ELPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C-~lP~~C~~C~l~ 226 (324)
.|+|++|+-++= +.|..||+||..
T Consensus 138 ~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 138 VYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp EEECTTTCCEEESCCCSBCTTTCCB
T ss_pred eeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 899999999875 578899999953
No 80
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=82.93 E-value=0.17 Score=36.09 Aligned_cols=69 Identities=23% Similarity=0.455 Sum_probs=43.2
Q ss_pred CCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceeeCCC
Q 020564 218 TDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACPK 287 (324)
Q Consensus 218 ~~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~~ 287 (324)
-.|+.|+..+.+...|.+-. |+- - ..-.|..|.+.|..... .....|.|+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~ 62 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHSD--T-----------------RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHHT--C-----------------CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred ccCCCCcccccCchhHHHHHHHcCC--C-----------------CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence 35778888888888876532 221 0 12358888877764310 0123599999
Q ss_pred CCcccccccchhhhhcCC
Q 020564 288 CKKHFCLECDIYIHESLH 305 (324)
Q Consensus 288 C~~~fC~dCd~fihe~lh 305 (324)
|+..|=..=++-.|...|
T Consensus 63 C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 63 CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp TSCEESSHHHHHHHHHHH
T ss_pred cchhhCChHHHHHHHHhh
Confidence 999887766666665443
No 81
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=82.82 E-value=1.5 Score=39.07 Aligned_cols=33 Identities=21% Similarity=0.531 Sum_probs=27.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
..|..|.++|.-- .-++-|..|+..||..|..+
T Consensus 165 ~~C~~C~~~F~~~----~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 165 EECHRCRVQFGVM----TRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp SBCTTTCCBCBTT----BCCEECTTTCCEECTTTCCE
T ss_pred CCCcCcCCCCCcc----ccccccCCCcCEeChhhcCC
Confidence 4899999999632 23688999999999999764
No 82
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=82.81 E-value=12 Score=37.36 Aligned_cols=137 Identities=14% Similarity=0.116 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCee----------------------------eEeecCCCCHHHHHHHH
Q 020564 7 RMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVA----------------------------NCLTDLGGSPESHIKAL 58 (324)
Q Consensus 7 Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a----------------------------~~l~~lt~n~~~~~~~L 58 (324)
-++.+++....+.++.-..-..-|||+.+|.|+.. .-+.+||.|..+..+.+
T Consensus 148 dl~~lk~lg~~L~~~l~~~t~~~RiGfGsFvDK~v~P~~~~~p~~l~~PC~~~~~~c~p~f~fr~~l~LT~d~~~F~~~V 227 (503)
T 3v4v_B 148 DLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDAQAFEREV 227 (503)
T ss_dssp HHHHHHHSSHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCHHHHHCCSSCSSSCCCCCCSEEEEEEEESCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCcCcEEeeeeecccccCCcccCCHHHhcCCCcCCCCCCCCCcceEEEEEecCCHHHHHHHH
Confidence 35566666677777766667888999999988521 12568899999999988
Q ss_pred hhhcC------CCCcchHHHHHHHHH---HHhhCCCCCCCceEEEEEeCCCC----------------------------
Q 020564 59 MGKLG------CSGDSSLQNALDLVQ---GLLSQIPSYGHREVLILYSALST---------------------------- 101 (324)
Q Consensus 59 ~~~~~------~~G~~sL~naL~~A~---~~L~~~p~~~~reILil~gS~~t---------------------------- 101 (324)
.+... ++| .| .||..|. ..+.=++ .+|+|||++....
T Consensus 228 ~~~~iSGnlD~PEg--gf-DAlmQaavC~~~IgWR~---a~rllV~~TDA~fH~agDgkLaGIv~pNDg~CHL~~~~~Yt 301 (503)
T 3v4v_B 228 GRQSVSGNLDSPEG--GF-DAILQAALCQEQIGWRN---VSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYS 301 (503)
T ss_dssp TTCCCCCCSSSSBC--HH-HHHHHHHHCHHHHTCCS---SEEEEEEEESSCBCCTTGGGTTTCCSCCCSSCCBCTTSBBG
T ss_pred hhcCccCCCCCCch--HH-HHHHHHhhcccccCCCc---ceEEEEEECCCCcCcCCCccccceecCCCCCeEECCCCccc
Confidence 76421 222 23 4444444 2333332 4678888752211
Q ss_pred ----CCcccHHHHHHHHHhcCcEEEEEEcc-chHHHHHHHHHhhCCeeEEeCCH
Q 020564 102 ----CDPGDIMETIQKCKESKIRCSVIGLS-AEMFICKHLCQDTGGSYSVALDE 150 (324)
Q Consensus 102 ----~d~g~i~~ti~~akk~~IrV~vI~Lg-ae~~iLk~ia~~TgG~Y~va~d~ 150 (324)
-|.-.+-+..++|.++||.+- .++. ....+.+++++.-.|...-.+.+
T Consensus 302 ~s~~~DYPSv~ql~~kL~ennI~~I-FAVt~~~~~~Y~~L~~~ip~s~vg~Ls~ 354 (503)
T 3v4v_B 302 RSTEFDYPSVGQVAQALSAANIQPI-FAVTSAALPVYQELSKLIPKSAVGELSE 354 (503)
T ss_dssp GGGGSCCCCHHHHHHHHHHHTEEEE-EEECSSSHHHHHHHHTTSTTCEEEECCT
T ss_pred cccccCCCCHHHHHHHHHhcCCeEE-EEEcccchhHHHHHHHhCCCceeeEccc
Confidence 133356688999999999654 3333 34678999999888776444443
No 83
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=82.60 E-value=0.62 Score=32.96 Aligned_cols=57 Identities=18% Similarity=0.423 Sum_probs=39.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNP 318 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~ 318 (324)
....|.-|...+.++.. ......-..|++.||.+|=.-.-+.-..||-|........
T Consensus 9 ~~~~C~IC~~~~~~~~~-~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQ-NGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 65 (71)
T ss_dssp TCCBCTTTCCBHHHHHT-TTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCS
T ss_pred CCCCCcccChhhhcccc-ccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhh
Confidence 45689999987764310 0112456789999999997655556689999987555443
No 84
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=82.29 E-value=0.75 Score=33.70 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=28.1
Q ss_pred ccccccccccCCC----------CCCCceeeCCCCCcccccccchhhhh-cCCC
Q 020564 264 TCFGCQQSLLSSG----------NKPGLYVACPKCKKHFCLECDIYIHE-SLHN 306 (324)
Q Consensus 264 ~C~~C~~~~~~~~----------~~~~~~~~C~~C~~~fC~dCd~fihe-~lh~ 306 (324)
.|.-|.+.|.... ......|.|+.|+..|=..=++-.|. ..|.
T Consensus 37 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 37 SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp ECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred cCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 4777777665431 11114689999999998777777775 4563
No 85
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=82.03 E-value=2.2 Score=29.12 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=30.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
....|.-|...|.++. --.|++.||.+|-.- .-..||-|....
T Consensus 5 ~~~~C~IC~~~~~~p~--------~l~CgH~fC~~Ci~~---~~~~CP~Cr~~~ 47 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPK--------LLPCLHTLCSGCLEA---SGMQCPICQAPW 47 (56)
T ss_dssp CCSSCSSSCSSCBCCS--------CSTTSCCSBTTTCSS---SSSSCSSCCSSS
T ss_pred cCCCceEeCCccCCeE--------EcCCCCcccHHHHcc---CCCCCCcCCcEe
Confidence 3457999998776531 125999999999433 456899997643
No 86
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=81.91 E-value=0.7 Score=32.49 Aligned_cols=24 Identities=29% Similarity=0.688 Sum_probs=20.7
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 020564 203 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|=. ||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG 45 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCC
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5999999999975 887 89999963
No 87
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=81.81 E-value=0.93 Score=40.13 Aligned_cols=33 Identities=21% Similarity=0.609 Sum_probs=26.9
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchh
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY 299 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f 299 (324)
..|..|.++|.-. ..++-|-.|+.+||.+|--+
T Consensus 162 ~~C~~C~~~F~~~----~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 162 RVCHRCRVEFTFT----NRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp SBCTTTCCBCCSS----SCCEECTTTCCEECSTTSCE
T ss_pred CccCCCCCccCCc----ccccccCCcCCEEChHHhCC
Confidence 5899999999632 23688999999999999764
No 88
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=81.79 E-value=1.5 Score=30.71 Aligned_cols=47 Identities=19% Similarity=0.369 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
...|.-|...+.++ ..-..|++.||.+|-.-.-+.-..||-|.....
T Consensus 5 ~~~C~IC~~~~~~~-------~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNY-------SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSC-------EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCC-------cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 45799998776432 234569999999997655556689999976443
No 89
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=81.50 E-value=1.2 Score=32.13 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=36.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc-CCCCCCCCCCCCCCCcccC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~-lh~CpgC~~~~~~~~~~~~ 322 (324)
..-.|.-|...|.++ ..- .|++.||.+|=.-.-+. -..||-|........+..|
T Consensus 7 ~~~~C~IC~~~~~~P-------v~~-~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 7 EYFRCPISLELMKDP-------VIV-STGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSSSCTTTSCCCSSE-------EEE-TTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEEC
T ss_pred ccCCCCCccccccCC-------EEc-CCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccC
Confidence 356799999777543 222 59999999995443343 6789999876554444433
No 90
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=81.31 E-value=0.57 Score=40.86 Aligned_cols=24 Identities=21% Similarity=0.502 Sum_probs=21.2
Q ss_pred eeEcCCCCcccc--cCCCCCCCCCce
Q 020564 203 GYTCPRCKARVC--ELPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C--~lP~~C~~C~l~ 226 (324)
-|+|++|+-++= ++|..||+||..
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 799999999984 689999999974
No 91
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=81.17 E-value=1.4 Score=31.99 Aligned_cols=39 Identities=21% Similarity=0.501 Sum_probs=28.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|+.|.+.+.- ..|+| +|+..||..=- |-.-|+|++
T Consensus 14 ~~~rC~~C~kkvgl------~~f~C-rCg~~FC~~HR---y~e~H~C~f 52 (64)
T 1wfh_A 14 RPNRCTVCRKRVGL------TGFMC-RCGTTFCGSHR---YPEVHGCTF 52 (64)
T ss_dssp SCCCCTTTCCCCCT------TCEEC-SSSCEECTTTC---STTTTTCCC
T ss_pred cCCcChhhCCccCc------cCEEe-ecCCEeccccC---CcccCCCCc
Confidence 45689999876532 14999 79999998632 345788875
No 92
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=80.60 E-value=0.78 Score=34.88 Aligned_cols=24 Identities=29% Similarity=0.737 Sum_probs=21.0
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 020564 203 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|=. +|. .||+||..
T Consensus 27 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 27 LFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred eEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 7999999999974 887 89999963
No 93
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.45 E-value=0.67 Score=33.16 Aligned_cols=47 Identities=23% Similarity=0.393 Sum_probs=33.2
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
....|.-|...+.++ ..- .|++.||.+|-.-.-..-..||-|.....
T Consensus 14 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 14 TVPECAICLQTCVHP-------VSL-PCKHVFCYLCVKGASWLGKRCALCRQEIP 60 (71)
T ss_dssp SCCBCSSSSSBCSSE-------EEE-TTTEEEEHHHHHHCTTCSSBCSSSCCBCC
T ss_pred CCCCCccCCcccCCC-------EEc-cCCCHHHHHHHHHHHHCCCcCcCcCchhC
Confidence 456899998776532 223 49999999997644344578999986544
No 94
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=80.23 E-value=0.85 Score=35.39 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=35.1
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 316 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~ 316 (324)
...|.-|...|.+ ......|++.||.+|=.-.-+.-..||-|......
T Consensus 15 ~~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFID-------ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhC-------cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 4579999877754 24566899999999965444445899999875443
No 95
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.98 E-value=2 Score=29.98 Aligned_cols=49 Identities=22% Similarity=0.533 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh-hcCCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHSN 317 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fih-e~lh~CpgC~~~~~~~ 317 (324)
....|.-|...+.++. . ..|++.||.+|=.-.- ..-..||-|.......
T Consensus 14 ~~~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPK-------Q-TECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCEECTTTCCEESSCC-------C-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred cCCCCCCCChHhcCee-------E-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 3567999997776431 1 3799999999965443 4556899998765443
No 96
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.54 E-value=1.4 Score=30.68 Aligned_cols=52 Identities=19% Similarity=0.484 Sum_probs=36.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 313 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~ 313 (324)
....|.-|...+.++... ...+.-..|++.||.+|-.-.-+.-..||-|...
T Consensus 14 ~~~~C~IC~~~~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~ 65 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQN-GRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKK 65 (69)
T ss_dssp CCCCCTTTCCCHHHHTTT-TCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCC
T ss_pred CCCCCcccCccccccccc-cCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCc
Confidence 456899999877643211 1123456899999999987665667799999754
No 97
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=79.27 E-value=0.94 Score=31.44 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=19.9
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 020564 203 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|= +||. .||+||..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 489999999986 5787 89999863
No 98
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=78.98 E-value=1.9 Score=33.26 Aligned_cols=50 Identities=20% Similarity=0.462 Sum_probs=33.1
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcC---CCCCCCCCCCCCCCcc
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL---HNCPGCESLRHSNPIV 320 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~l---h~CpgC~~~~~~~~~~ 320 (324)
..|.-|...+.++. . -.|++.||.+|=.-.-+.- ..||-|........+.
T Consensus 22 ~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~ 74 (112)
T 1jm7_A 22 LECPICLELIKEPV-------S-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74 (112)
T ss_dssp TSCSSSCCCCSSCC-------B-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCB
T ss_pred CCCcccChhhcCeE-------E-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcC
Confidence 46999987775431 1 2699999999965433332 3899998755544433
No 99
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=78.94 E-value=0.63 Score=35.48 Aligned_cols=70 Identities=26% Similarity=0.528 Sum_probs=37.3
Q ss_pred CCCCC--CCCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceee
Q 020564 217 PTDCR--ICGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVA 284 (324)
Q Consensus 217 P~~C~--~C~l~Lvs~~hLars--yhhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~ 284 (324)
|-.|+ .|+..+.+...|.+- .|+- . ..-.|..|.+.|..... .....|+
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~ 96 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTG--V-----------------KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHC--C-----------------CCEECTTTCCEESCHHHHHHHHHHHHTCCCEE
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCC--C-----------------CCccCCccCchhCCHHHHHHHHHHhcCCCCee
Confidence 44666 577777776666542 1220 0 12246677766654310 0122477
Q ss_pred C--CCCCcccccccchhhhhcCC
Q 020564 285 C--PKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 285 C--~~C~~~fC~dCd~fihe~lh 305 (324)
| +.|+..|=..=++-.|...|
T Consensus 97 C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 97 CRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp CCSTTCCCEESSHHHHHHHHHTC
T ss_pred CCCCCCccccCCHHHHHHHHhcC
Confidence 7 67777776655555555443
No 100
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.84 E-value=2.2 Score=28.67 Aligned_cols=42 Identities=26% Similarity=0.574 Sum_probs=29.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh-h--hcCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI-H--ESLHNCPGC 310 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fi-h--e~lh~CpgC 310 (324)
....|.-|...+.++. . -.|++.||.+|=.-. . +.-..||-|
T Consensus 14 ~~~~C~IC~~~~~~p~-------~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPV-------I-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCC-------C-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccE-------e-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4568999998776431 1 369999999996543 1 245678877
No 101
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.58 E-value=2 Score=31.39 Aligned_cols=47 Identities=26% Similarity=0.603 Sum_probs=35.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
....|.-|...+.++ .. ..|++.||.+|-.-.-+.-..||-|.....
T Consensus 14 ~~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP-------VV-TKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE-------EE-CTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe-------eE-ccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 355899998777542 22 479999999997665566779999987543
No 102
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=78.22 E-value=3.1 Score=30.81 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=34.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh-hcCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLRHS 316 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fih-e~lh~CpgC~~~~~~ 316 (324)
....|.-|.-++... +...+.| .|++.||.+|-.-+- +.-..||.|-.....
T Consensus 10 ~~~~CpICle~~~~~---d~~~~p~-~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEID---DINFFPC-TCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTT---TTTCCSS-TTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCccc---ccccccc-CCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 456899999777421 1123345 699999999965543 234689999864443
No 103
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.02 E-value=2.4 Score=30.00 Aligned_cols=49 Identities=31% Similarity=0.663 Sum_probs=33.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh---cCCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCESLRHSN 317 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe---~lh~CpgC~~~~~~~ 317 (324)
....|.-|...+.++ ..- .|++.||.+|-.-.-+ .-..||-|.......
T Consensus 19 ~~~~C~IC~~~~~~~-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCBCTTTCSBCSSE-------EEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred cCCEeccCCcccCCe-------EEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 456899999777532 222 7999999999654433 344899998755443
No 104
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.98 E-value=2.5 Score=29.13 Aligned_cols=42 Identities=33% Similarity=0.748 Sum_probs=30.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh---cCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGC 310 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe---~lh~CpgC 310 (324)
....|.-|...+.++ ..- .|++.||.+|=.-.-+ .-..||-|
T Consensus 19 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKP-------VTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSC-------EEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCe-------EEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 456899999777643 222 7999999999654443 45589987
No 105
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.68 E-value=2.1 Score=32.46 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=44.6
Q ss_pred CCCCCCCCceecCchhHHhhhcccCCCCCCcccCccCCCCCCCCCCCccccccccc--cCCCC--------CCCceeeCC
Q 020564 217 PTDCRICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSL--LSSGN--------KPGLYVACP 286 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLarsyhhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~--~~~~~--------~~~~~~~C~ 286 (324)
|-.|+.|+..+.+...|.+-... -..+.+. ....|..|.+.| ..... .....|.|+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~---~~h~~~~-----------~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~ 84 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNE---TGHYRDD-----------NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM 84 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHH---TCCCBCS-----------CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred CEECCccCchhcCHHHHHHHHHH---hCccccC-----------CCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence 33566778888888888653321 0001111 112377787777 43321 122369999
Q ss_pred CCCcccccccchhhhhcCC
Q 020564 287 KCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 287 ~C~~~fC~dCd~fihe~lh 305 (324)
.|+..|=..=++-.|...|
T Consensus 85 ~C~k~f~~~~~L~~H~~~h 103 (115)
T 2dmi_A 85 YCGHSFESLQDLSVHMIKT 103 (115)
T ss_dssp SSCCBCSSHHHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHh
Confidence 9999998888888886554
No 106
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=77.57 E-value=0.64 Score=36.78 Aligned_cols=44 Identities=30% Similarity=0.703 Sum_probs=34.4
Q ss_pred ccccccccccCCCCCCCceeeCCCCCcccccccchhhh-hcCCCCCCCCCCC
Q 020564 264 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH-ESLHNCPGCESLR 314 (324)
Q Consensus 264 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fih-e~lh~CpgC~~~~ 314 (324)
.|--|..++. .+.+---|++.||.||-...- +.-..||+|....
T Consensus 3 fC~~C~~Pi~-------iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V 47 (101)
T 3vk6_A 3 FCDKCGLPIK-------VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPV 47 (101)
T ss_dssp BCTTTCSBCS-------EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred ecCccCCCeE-------EEeeeccccccHHHHHHHHHHhccCCCCcCcCCee
Confidence 5778887775 245788899999999987654 5678999998644
No 107
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=77.17 E-value=1.2 Score=31.19 Aligned_cols=24 Identities=33% Similarity=0.872 Sum_probs=19.6
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 020564 203 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|= +||- .||+||..
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 589999998886 5776 79999964
No 108
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=77.05 E-value=1.3 Score=33.47 Aligned_cols=39 Identities=26% Similarity=0.714 Sum_probs=29.3
Q ss_pred ccccccccccCCCCCCCceeeCCCCCcccccccchhh---hhcC
Q 020564 264 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI---HESL 304 (324)
Q Consensus 264 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fi---he~l 304 (324)
.|..|...+...+. .....|+.|+..||..|-.-- |+-+
T Consensus 27 wCP~C~~~~~~~~~--~~~v~C~~C~~~FC~~C~~~w~~~H~~~ 68 (86)
T 2ct7_A 27 WCAQCSFGFIYERE--QLEATCPQCHQTFCVRCKRQWEEQHRGR 68 (86)
T ss_dssp CCSSSCCCEECCCS--CSCEECTTTCCEECSSSCSBCCTTTTTS
T ss_pred ECcCCCchheecCC--CCceEeCCCCCccccccCCchhhcCCCC
Confidence 58899877654322 234689999999999999877 7654
No 109
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=76.89 E-value=1.6 Score=30.32 Aligned_cols=24 Identities=33% Similarity=0.861 Sum_probs=19.4
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 020564 203 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|= +||. .||+||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCc
Confidence 589999999886 3677 79999863
No 110
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.53 E-value=2.9 Score=32.82 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCcc
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 320 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~ 320 (324)
...|.-|...|.++ ..-..|++.||..|=.-.-+ ..||-|........+.
T Consensus 22 ~~~C~IC~~~~~~p-------v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~ 71 (117)
T 1jm7_B 22 LLRCSRCTNILREP-------VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLK 71 (117)
T ss_dssp TTSCSSSCSCCSSC-------BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCC
T ss_pred CCCCCCCChHhhCc-------cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcccccc
Confidence 35799999777643 22337999999999643333 6899998755444333
No 111
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=75.99 E-value=1.1 Score=30.67 Aligned_cols=57 Identities=18% Similarity=0.418 Sum_probs=38.0
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCc
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 319 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~ 319 (324)
...|.-|...+.++... .....-..|++.||.+|-.-.-+.-..||-|........+
T Consensus 3 ~~~C~IC~~~~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQN-GRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCBCTTTCCBHHHHHHT-TCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCE
T ss_pred CCCCCccChhhhCcccc-CCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccce
Confidence 34689998777542100 0123456899999999987665667799999876554433
No 112
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=75.88 E-value=0.78 Score=32.80 Aligned_cols=27 Identities=41% Similarity=0.920 Sum_probs=19.0
Q ss_pred cce-eecCCc-cccCeeEcCCCCcccccCC
Q 020564 190 SIC-SCHKEV-KVGVGYTCPRCKARVCELP 217 (324)
Q Consensus 190 a~C-~CH~~~-~~~~Gy~Cp~C~s~~C~lP 217 (324)
.+| .|+... ... -|.||+|+.+||+|.
T Consensus 12 ~~C~vC~~~~~~~a-kY~CPrC~~rYCSl~ 40 (59)
T 1x4s_A 12 GPCGFCPAGEVQPA-RYTCPRCNAPYCSLR 40 (59)
T ss_dssp EEECSSCTTCCEEE-CEECTTTCCEESSHH
T ss_pred CcCcCCCCCcCCCc-cccCcCCCCCccChH
Confidence 355 466422 234 799999999999874
No 113
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.86 E-value=1.1 Score=33.98 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=26.0
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhhcC
Q 020564 264 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHESL 304 (324)
Q Consensus 264 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCd~fihe~l 304 (324)
.|.-|.+.|.... -.....|+|+.|+..|=..-++-.|...
T Consensus 39 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (110)
T 2csh_A 39 GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS 87 (110)
T ss_dssp ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence 4666766665431 0112358999999988777777777543
No 114
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=75.68 E-value=1.4 Score=32.50 Aligned_cols=24 Identities=25% Similarity=0.523 Sum_probs=20.8
Q ss_pred eeEcCCCCccccc-----------------CCC--CCCCCCce
Q 020564 203 GYTCPRCKARVCE-----------------LPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~-----------------lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|=. ||. .||+||..
T Consensus 7 ~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 7 KYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred eEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 6999999999873 887 89999974
No 115
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=75.51 E-value=0.96 Score=36.87 Aligned_cols=44 Identities=23% Similarity=0.523 Sum_probs=32.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
..|.-|...|.++ ..- .|++.||.+|=.-.-+.-..||.|-...
T Consensus 54 ~~C~iC~~~~~~~-------~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 54 LQCIICSEYFIEA-------VTL-NCAHSFCSYCINEWMKRKIECPICRKDI 97 (138)
T ss_dssp SBCTTTCSBCSSE-------EEE-TTSCEEEHHHHHHHTTTCSBCTTTCCBC
T ss_pred CCCcccCcccCCc-------eEC-CCCCCccHHHHHHHHHcCCcCCCCCCcC
Confidence 3699999777542 222 5999999999655556668899997543
No 116
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=75.36 E-value=2 Score=32.34 Aligned_cols=49 Identities=16% Similarity=0.339 Sum_probs=34.6
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
....|.-|...|.... ...--.|++.||.+|-.-.-..-..||-|....
T Consensus 39 ~~~~C~IC~~~~~~~~-----~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGD-----VATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECCTTC-----EEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBS
T ss_pred CCCCCcccChhhcCCC-----cEEecCCCChHHHHHHHHHHHcCCcCcCcCccC
Confidence 4568999997775321 222234999999999766556667999997643
No 117
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=74.76 E-value=1.4 Score=33.91 Aligned_cols=24 Identities=25% Similarity=0.661 Sum_probs=20.6
Q ss_pred eeEcCCCCcccc-----------------cCCC--CCCCCCce
Q 020564 203 GYTCPRCKARVC-----------------ELPT--DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------------~lP~--~C~~C~l~ 226 (324)
-|+|++|+-+|= ++|. .||+||..
T Consensus 35 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 77 (87)
T 1s24_A 35 KWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 77 (87)
T ss_dssp EEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred eEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCC
Confidence 799999998886 6777 79999963
No 118
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=74.23 E-value=6.1 Score=31.41 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=19.0
Q ss_pred CCcccccc--------ccccCCCCCCCceeeCCCCCccc
Q 020564 262 RSTCFGCQ--------QSLLSSGNKPGLYVACPKCKKHF 292 (324)
Q Consensus 262 ~~~C~~C~--------~~~~~~~~~~~~~~~C~~C~~~f 292 (324)
...|..|. .+....+...+..|+|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w 110 (113)
T 3h0g_I 72 DKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAF 110 (113)
T ss_dssp CSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCC
T ss_pred ccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEE
Confidence 35788884 22222233455679999998754
No 119
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.17 E-value=0.92 Score=32.08 Aligned_cols=23 Identities=30% Similarity=1.015 Sum_probs=17.7
Q ss_pred cee-ecCCccccCeeEcCCCCcccccCC
Q 020564 191 ICS-CHKEVKVGVGYTCPRCKARVCELP 217 (324)
Q Consensus 191 ~C~-CH~~~~~~~Gy~Cp~C~s~~C~lP 217 (324)
+|. |+. .. -|.||+|+.+||++.
T Consensus 14 ~C~vC~~---~~-kY~CPrC~~~yCSl~ 37 (56)
T 2yqq_A 14 VCVICLE---KP-KYRCPACRVPYCSVV 37 (56)
T ss_dssp CCTTTCS---CC-SEECTTTCCEESSHH
T ss_pred ccCcCcC---CC-eeeCCCCCCCeeCHH
Confidence 454 665 34 799999999999874
No 120
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.81 E-value=3 Score=30.72 Aligned_cols=53 Identities=19% Similarity=0.393 Sum_probs=34.9
Q ss_pred CCCccccccccccCCC-------CCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSG-------NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 313 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~-------~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~ 313 (324)
....|.-|+..|...- ..+.....-+.|++.|+.+|=.---++-.+||-|-..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~ 73 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 73 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCB
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCC
Confidence 4557999988885420 0111234556899999999955444455799999754
No 121
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=73.19 E-value=2.5 Score=34.22 Aligned_cols=31 Identities=19% Similarity=0.493 Sum_probs=18.9
Q ss_pred CCccccccc--------cccCCCCCCCceeeCCCCCccc
Q 020564 262 RSTCFGCQQ--------SLLSSGNKPGLYVACPKCKKHF 292 (324)
Q Consensus 262 ~~~C~~C~~--------~~~~~~~~~~~~~~C~~C~~~f 292 (324)
...|..|.. +....+...+..|.|.+|++.+
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w 110 (122)
T 1twf_I 72 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF 110 (122)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEE
T ss_pred CCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEe
Confidence 457999942 2222223345679999998754
No 122
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=72.68 E-value=1.7 Score=38.29 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=19.8
Q ss_pred eeEcCCCCccccc-CCCCCCCCCce
Q 020564 203 GYTCPRCKARVCE-LPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~-lP~~C~~C~l~ 226 (324)
-|+|++|+-++=. .|-.||+||..
T Consensus 171 ~~~C~~CG~i~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 171 FHLCPICGYIHKGEDFEKCPICFRP 195 (202)
T ss_dssp EEECSSSCCEEESSCCSBCTTTCCB
T ss_pred EEEECCCCCEEcCcCCCCCCCCCCC
Confidence 7999999999764 45599999964
No 123
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=71.75 E-value=2.2 Score=33.84 Aligned_cols=45 Identities=20% Similarity=0.624 Sum_probs=31.7
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccc-hhhhhcCCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD-IYIHESLHNCPGCESLRH 315 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd-~fihe~lh~CpgC~~~~~ 315 (324)
..|.-|...|.++ .. -.|++.||.+|= .++...-..||-|-....
T Consensus 53 ~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRP-------IT-TVCQHNVCKDCLDRSFRAQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCc-------EE-eeCCCcccHHHHHHHHhHCcCCCCCCCccCC
Confidence 4699999777643 11 279999999995 344445569999986543
No 124
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.26 E-value=2.1 Score=31.33 Aligned_cols=40 Identities=33% Similarity=0.649 Sum_probs=27.3
Q ss_pred CCCccccccccccCCCCCCCc--eeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGL--YVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~--~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|+.|.+.+.-. . .|+| +|+..||.. --|-.-|+|++
T Consensus 14 ~~~rC~~C~kk~gL~-----~~egf~C-rCg~~FC~~---HRy~e~H~C~f 55 (67)
T 1x4w_A 14 SRRRCFQCQTKLELV-----QQELGSC-RCGYVFCML---HRLPEQHDCTF 55 (67)
T ss_dssp CTTBCSSSCCBCCHH-----HHHHHCC-SSSCCCCTT---TCSTGGGTCSS
T ss_pred cCCcchhhCCeeccc-----ccCceEe-cCCCEehhc---cCCccccCCcc
Confidence 456899998665311 1 2899 999999975 33445677765
No 125
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=71.10 E-value=1.5 Score=34.59 Aligned_cols=49 Identities=31% Similarity=0.586 Sum_probs=33.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchh-hhhcCCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHESLHNCPGCESLRHSN 317 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f-ihe~lh~CpgC~~~~~~~ 317 (324)
....|.-|...+.++ ... .|++.||.+|=.- +...-..||-|.......
T Consensus 17 ~~~~C~IC~~~~~~p-------~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 17 SKYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp GGGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCcCChhhcCe-------EEC-CcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 345899999777542 334 5999999999643 333334999997655433
No 126
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=70.66 E-value=0.87 Score=43.77 Aligned_cols=53 Identities=19% Similarity=0.358 Sum_probs=0.0
Q ss_pred CCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchh-------hhhcCCCCCCCCC
Q 020564 256 DPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-------IHESLHNCPGCES 312 (324)
Q Consensus 256 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f-------ihe~lh~CpgC~~ 312 (324)
|........|..|..+|.-. ..++.|..|+..||..|.-. .......|-.|-.
T Consensus 369 w~~~~~~~~c~~c~~~f~~~----~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~ 428 (434)
T 3mpx_A 369 LVPVTHVMMCMNCGCDFSLT----LRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFG 428 (434)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCCcccCCcCCCcCCCCCCc----chhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHH
Confidence 43334456899999988632 13588999999999999853 1334567777754
No 127
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=70.09 E-value=2.3 Score=27.83 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=25.5
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLar 235 (324)
-|.|+.|+..|- +-|-.|+.|+..+.....|.+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 50 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRY 50 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHH
Confidence 588888887765 356789999999988888864
No 128
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=69.81 E-value=2.6 Score=31.57 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=29.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|+|++|+..|- +-|-.|+.|+..+.....|.|-
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 75 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH 75 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence 699999998877 3567899999999999999764
No 129
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=69.77 E-value=2.7 Score=29.30 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=28.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|++|+..|- +-|-.|+.||..+....+|.+-
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H 51 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH 51 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHH
T ss_pred CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHH
Confidence 588999988776 4577899999999999888753
No 130
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=69.41 E-value=5.6 Score=33.21 Aligned_cols=43 Identities=16% Similarity=0.235 Sum_probs=32.4
Q ss_pred eEEEEEeCCCCCCcccHHHHHHHHHhc-CcEEEEEEccc-hHHHHHHHHH
Q 020564 91 EVLILYSALSTCDPGDIMETIQKCKES-KIRCSVIGLSA-EMFICKHLCQ 138 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~~ti~~akk~-~IrV~vI~Lga-e~~iLk~ia~ 138 (324)
..+||++++ +|+..+++.+++. |++|.++|... -..-|++.|+
T Consensus 110 d~~vLvSgD-----~DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad 154 (165)
T 2qip_A 110 DRVILVSGD-----GDFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCAD 154 (165)
T ss_dssp SEEEEECCC-----GGGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSS
T ss_pred CEEEEEECC-----hhHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCC
Confidence 356666654 4788999999996 99999999854 2456777775
No 131
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=69.04 E-value=3.5 Score=30.72 Aligned_cols=39 Identities=28% Similarity=0.631 Sum_probs=27.1
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|+.|.+.+.- ..|.|. |+..||..=- +-.-|+|++
T Consensus 24 ~~nRC~~CrKkvgL------~gf~Cr-Cg~~FCs~HR---y~e~H~C~f 62 (74)
T 1wfl_A 24 KKNRCFMCRKKVGL------TGFDCR-CGNLFCGLHR---YSDKHNCPY 62 (74)
T ss_dssp CTTBCSSSCCBCGG------GCEECT-TSCEECSSSC---STTTTTCCC
T ss_pred cCCcChhhCCcccc------cCeecC-CCCEechhcC---CCccCCCcc
Confidence 34589999876532 149999 9999997532 334677765
No 132
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=69.00 E-value=1.8 Score=36.21 Aligned_cols=45 Identities=27% Similarity=0.575 Sum_probs=32.8
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc-CCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLR 314 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~-lh~CpgC~~~~ 314 (324)
..|.-|...|.+ ......|++.||.+|=.-.-+. -..||-|-...
T Consensus 55 ~~C~IC~~~~~~-------p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 55 LMCPICLDMLKN-------TMTTKECLHRFCADCIITALRSGNKECPTCRKKL 100 (165)
T ss_dssp HBCTTTSSBCSS-------EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred CCCcccChHhhC-------cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcC
Confidence 379999877754 2456789999999996444333 56799998644
No 133
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=68.86 E-value=2.6 Score=32.25 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=20.3
Q ss_pred eeEcC--CCCcccc-------------cCCCCCCCCCceecCchhHHh
Q 020564 203 GYTCP--RCKARVC-------------ELPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 203 Gy~Cp--~C~s~~C-------------~lP~~C~~C~l~Lvs~~hLar 235 (324)
.|.|+ .|+..|- +-|-.|+.|+..+.+...|.+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~ 52 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKR 52 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHH
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHH
Confidence 56777 6665543 223467777777777666654
No 134
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=68.85 E-value=3.4 Score=32.02 Aligned_cols=51 Identities=24% Similarity=0.565 Sum_probs=33.3
Q ss_pred CCccccccccccCCCC----------CCCceeeCCCCCcccccccchhhh-----hcCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIH-----ESLHNCPGCES 312 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~fC~dCd~fih-----e~lh~CpgC~~ 312 (324)
...|.-|+..|..+.. .....-+-..|++.||.+|=.-.- +.-..||-|-.
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 4579999988865421 001122356899999999954332 34569999975
No 135
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=68.71 E-value=2.8 Score=33.55 Aligned_cols=24 Identities=25% Similarity=0.474 Sum_probs=13.1
Q ss_pred eeeCCC--CCcccccccchhhhhcCC
Q 020564 282 YVACPK--CKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~--C~~~fC~dCd~fihe~lh 305 (324)
.|.|+. |+..|=..=++-.|...|
T Consensus 120 ~~~C~~~~C~k~f~~~~~L~~H~~~H 145 (155)
T 2rpc_A 120 PFKCEFEGCDRRFANSSDRKKHMHVH 145 (155)
T ss_dssp SBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred CccCCCCCCCCccCCHHHHHHHHHHh
Confidence 355654 666655555555555544
No 136
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=68.71 E-value=1.8 Score=33.79 Aligned_cols=44 Identities=20% Similarity=0.477 Sum_probs=30.6
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccch-hhhhcCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLR 314 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~-fihe~lh~CpgC~~~~ 314 (324)
..|.-|...+.++ +. -.|++.||.+|=. ++...-..||.|....
T Consensus 16 ~~C~iC~~~~~~p------~~--~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 16 CQCGICMEILVEP------VT--LPCNHTLCKPCFQSTVEKASLCCPFCRRRV 60 (115)
T ss_dssp HBCTTTCSBCSSC------EE--CTTSCEECHHHHCCCCCTTTSBCTTTCCBC
T ss_pred CCCccCCcccCce------eE--cCCCCHHhHHHHHHHHhHCcCCCCCCCccc
Confidence 4799999777643 11 1699999999943 3333357899997643
No 137
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.52 E-value=6.2 Score=28.71 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=33.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc---CCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES---LHNCPGCESLR 314 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~---lh~CpgC~~~~ 314 (324)
....|.-|...|.+.. .....- .|++.||.+|=.-.-+. -..||.|....
T Consensus 14 ~~~~C~IC~~~~~~~~---~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 14 EVLECPICMESFTEEQ---LRPKLL-HCGHTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp SCCBCTTTCCBCCTTS---SCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCCccCCccccccC---CCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 4568999998876421 111222 69999999996544443 37899998643
No 138
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=66.46 E-value=7.3 Score=30.84 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=42.5
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCC--
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSG-- 276 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~-- 276 (324)
-|.|+.|. |..|+..+.+...|.+-. |+- . ..-.|. .|.+.|....
T Consensus 34 ~~~C~~c~---------C~~c~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l 85 (155)
T 2gli_A 34 EFVCHWGG---------CSRELRPFKAQYMLVVHMRRHTG--E-----------------KPHKCTFEGCRKSYSRLENL 85 (155)
T ss_dssp CCCCCBTT---------CTTTTCCCSSHHHHHHHTHHHHC--C-----------------CCCCCCSTTCCCCCSSHHHH
T ss_pred ceeCCCCC---------ccchhhhhhhHHHHHHHHHhcCC--C-----------------CCccCCCCCCCCcccCHHHH
Confidence 57777663 666667777666665421 211 0 122465 4776665431
Q ss_pred ------CCCCceeeCCC--CCcccccccchhhhh-cCC
Q 020564 277 ------NKPGLYVACPK--CKKHFCLECDIYIHE-SLH 305 (324)
Q Consensus 277 ------~~~~~~~~C~~--C~~~fC~dCd~fihe-~lh 305 (324)
-.....|.|+. |+..|=..=++-.|. ..|
T Consensus 86 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H 123 (155)
T 2gli_A 86 KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123 (155)
T ss_dssp HHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred HHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence 01223577876 877777777777775 555
No 139
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=66.44 E-value=2.5 Score=40.34 Aligned_cols=43 Identities=21% Similarity=0.324 Sum_probs=30.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGC 310 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC 310 (324)
..+.|..|...|.+.. ..+|.|..|+..+|..|-..+. +|++=
T Consensus 356 ~~t~C~~C~~~~~g~~---~qg~~C~~C~~~~h~~C~~~~~----~C~~~ 398 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTF---YQGYRCYRCRAPAHKECLGRVP----PCGRH 398 (406)
T ss_dssp SCCBCTTTCCBCCSSS---SCEEEETTTCCEECGGGGGGSC----CC---
T ss_pred CCCCCccccchhceeC---CCCCCCCCCcCccchhhhhhCC----CCCCC
Confidence 4568999998885322 2479999999999999977654 37653
No 140
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.25 E-value=3.8 Score=29.57 Aligned_cols=42 Identities=21% Similarity=0.537 Sum_probs=30.3
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRHS 316 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~~ 316 (324)
..|.-|...+.++ + =-.|++. ||.+|. +.+..||-|......
T Consensus 26 ~~C~IC~~~~~~~------~--~~pCgH~~~C~~C~----~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 26 KLCKICMDRNIAI------V--FVPCGHLVTCKQCA----EAVDKCPMCYTVITF 68 (75)
T ss_dssp HSCSSSCSSCCCB------C--CSSSCCCCBCHHHH----HHCSBCTTTCCBCCC
T ss_pred CCCCcCCCCCCCE------E--EecCCCHHHHHHHh----hCCCCCccCCceecC
Confidence 3699998665432 1 1368999 999997 467999999865443
No 141
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=65.30 E-value=1.3 Score=31.90 Aligned_cols=70 Identities=21% Similarity=0.346 Sum_probs=43.8
Q ss_pred CCCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCceeeCC
Q 020564 218 TDCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYVACP 286 (324)
Q Consensus 218 ~~C~--~C~l~Lvs~~hLarsyh-hl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~~C~ 286 (324)
-.|+ .|+..+.+...|.+-.- |.- - ..-.|.-|.+.|..... .....|.|+
T Consensus 5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~-~-----------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 66 (90)
T 1a1h_A 5 YACPVESCDRRFSQSGSLTRHIRIHTG-Q-----------------KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66 (90)
T ss_dssp EECCSSSCCCEESSHHHHHHHHHHHHC-C-----------------CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred eECCCCCCCCccCCHHHHHHHHHHhCC-C-----------------CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC
Confidence 3455 48888888777765321 210 0 12357788877764310 012359999
Q ss_pred CCCcccccccchhhhhcCC
Q 020564 287 KCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 287 ~C~~~fC~dCd~fihe~lh 305 (324)
.|+..|=..=++-.|...|
T Consensus 67 ~C~~~f~~~~~l~~H~~~H 85 (90)
T 1a1h_A 67 ICGRKFARSDERKRHTKIH 85 (90)
T ss_dssp TTCCEESSHHHHHHHHGGG
T ss_pred CCCchhCCHHHHHHHHHHh
Confidence 9999998888887777665
No 142
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=65.06 E-value=4.5 Score=28.01 Aligned_cols=55 Identities=18% Similarity=0.446 Sum_probs=35.2
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCcccccccchhh-hhcCCCCCCCCCCCCCCCcc
Q 020564 262 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKKHFCLECDIYI-HESLHNCPGCESLRHSNPIV 320 (324)
Q Consensus 262 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~~fC~dCd~fi-he~lh~CpgC~~~~~~~~~~ 320 (324)
+..|.-|.. .+.++. ....=..|++.||.+|-.-. .+.-..||-|........+.
T Consensus 3 ~~~C~IC~~~~~~~~~----~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~ 59 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPS----LKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59 (65)
T ss_dssp TTCCSTTTTHHHHCSS----CCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCE
T ss_pred CCcCCcCCCCccCCCc----cCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccce
Confidence 346999987 565431 11112479999999996544 33446799998766555443
No 143
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=64.41 E-value=2.6 Score=23.15 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|+..|-..-.+-.|...|.
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHTTC
T ss_pred CccCCCCCcccCCHHHHHHHHHHhc
Confidence 4899999999998888888887764
No 144
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=64.31 E-value=3.9 Score=34.26 Aligned_cols=69 Identities=22% Similarity=0.351 Sum_probs=43.5
Q ss_pred HHHHHHhhCCeeEEeCCHHHHHHHHHhcCCCCccchhhhhhceeeecCCCCCCCCCccceeecCCccccCeeEcCCCCcc
Q 020564 133 CKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKAR 212 (324)
Q Consensus 133 Lk~ia~~TgG~Y~va~d~~hl~~lL~~~~~pp~~~~~~~~~~Li~mGfP~~~~~~~~a~C~CH~~~~~~~Gy~Cp~C~s~ 212 (324)
+=.+|...|+ .+.+|+..++++....-.+--. +. .+. ++.... -|.|..|+.+
T Consensus 89 lIaLA~~l~~--~lvT~D~~l~~vA~~~Gv~v~~--------~~-~~i---------------~~~~~~-~y~C~~Cg~~ 141 (165)
T 2lcq_A 89 VLALAYELKG--EIFSDDYNVQNIASLLGLRFRT--------LK-RGI---------------KKVIKW-RYVCIGCGRK 141 (165)
T ss_dssp HHHHHHHHTC--CEECCCHHHHHHHHHTTCCEEC--------CS-CCC---------------SSCCCC-CEEESSSCCE
T ss_pred HHHhHHHhCC--eEEcCcHHHHHHHHHCCCeEEc--------hh-hhc---------------cccccE-EEECCCCCCc
Confidence 3355666665 5667877788777766543111 00 011 122334 7999999999
Q ss_pred cccCCC--CCCCCCceec
Q 020564 213 VCELPT--DCRICGLQLV 228 (324)
Q Consensus 213 ~C~lP~--~C~~C~l~Lv 228 (324)
|=..++ .||.||..+.
T Consensus 142 ~~~~~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 142 FSTLPPGGVCPDCGSKVK 159 (165)
T ss_dssp ESSCCGGGBCTTTCCBEE
T ss_pred ccCCCCCCcCCCCCCcce
Confidence 976665 8999998753
No 145
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=64.09 E-value=1.5 Score=23.99 Aligned_cols=24 Identities=29% Similarity=0.616 Sum_probs=19.2
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|...-++-.|...|
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h 25 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKIH 25 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHh
Confidence 378999999998888877776654
No 146
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=64.04 E-value=2.4 Score=23.27 Aligned_cols=25 Identities=36% Similarity=0.700 Sum_probs=20.8
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|-..-++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 3899999999998888888877663
No 147
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=63.71 E-value=6.5 Score=32.52 Aligned_cols=90 Identities=23% Similarity=0.585 Sum_probs=56.6
Q ss_pred eeEc--CCCCcccc--------------cCCCCCC--CCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCC
Q 020564 203 GYTC--PRCKARVC--------------ELPTDCR--ICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSR 262 (324)
Q Consensus 203 Gy~C--p~C~s~~C--------------~lP~~C~--~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~ 262 (324)
-|.| +.|+..|- +-|-.|+ .|+..+.+...|.+-. +|.-.. ..
T Consensus 42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~-----------------~~ 104 (190)
T 1tf6_A 42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI-----------------CV 104 (190)
T ss_dssp SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTT-----------------SC
T ss_pred CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCc-----------------ce
Confidence 5677 66766553 2344677 7888887777776542 232111 12
Q ss_pred Ccc--ccccccccCCC--------CCCCceeeCCC--CCcccccccchhhhhcCCC---CCC
Q 020564 263 STC--FGCQQSLLSSG--------NKPGLYVACPK--CKKHFCLECDIYIHESLHN---CPG 309 (324)
Q Consensus 263 ~~C--~~C~~~~~~~~--------~~~~~~~~C~~--C~~~fC~dCd~fihe~lh~---Cpg 309 (324)
-.| ..|.+.|.... -.....|.|+. |+..|=..-++..|...|. |+.
T Consensus 105 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~ 166 (190)
T 1tf6_A 105 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166 (190)
T ss_dssp CEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCS
T ss_pred eeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCC
Confidence 357 77888776432 01223589977 9999988888888887764 666
No 148
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=63.67 E-value=7 Score=32.33 Aligned_cols=91 Identities=30% Similarity=0.572 Sum_probs=63.9
Q ss_pred eeEc--CCCCcccc--------------cCCCCC--CCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCC
Q 020564 203 GYTC--PRCKARVC--------------ELPTDC--RICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSR 262 (324)
Q Consensus 203 Gy~C--p~C~s~~C--------------~lP~~C--~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~ 262 (324)
-|.| +.|+..|- +-|-.| +.|+..+.+...|.+-. |+- ...
T Consensus 12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------~~~ 72 (190)
T 1tf6_A 12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-------------------EKN 72 (190)
T ss_dssp CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT-------------------CCC
T ss_pred ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC-------------------CCc
Confidence 6888 68887765 356789 88999999998887632 221 012
Q ss_pred Cccc--cccccccCCC----------CCCCceeeC--CCCCcccccccchhhhhcCC------CCCC--CCC
Q 020564 263 STCF--GCQQSLLSSG----------NKPGLYVAC--PKCKKHFCLECDIYIHESLH------NCPG--CES 312 (324)
Q Consensus 263 ~~C~--~C~~~~~~~~----------~~~~~~~~C--~~C~~~fC~dCd~fihe~lh------~Cpg--C~~ 312 (324)
-.|. .|.+.|.... ......|.| +.|+..|=..=++-.|...| .|+- |..
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k 144 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCC
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCc
Confidence 3588 8988886431 112346999 89999999888888886655 6866 864
No 149
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=67.52 E-value=1.5 Score=23.85 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=19.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..-++-.|...|
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIRHH 25 (26)
Confidence 378999999988877777777665
No 150
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=63.52 E-value=2.9 Score=22.53 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=19.7
Q ss_pred eeCCCCCcccccccchhhhhcCCC
Q 020564 283 VACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
|.|+.|++.|-..=++-.|...|.
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred ccCCCCCCcCCCHHHHHHHHHHcC
Confidence 789999999988888888877663
No 151
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=62.69 E-value=3.7 Score=25.56 Aligned_cols=25 Identities=28% Similarity=0.721 Sum_probs=21.0
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRSHT 36 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGGSS
T ss_pred ceECCCCCchhCCHHHHHHHHHHhC
Confidence 4899999999998888888877763
No 152
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=62.68 E-value=3.2 Score=29.67 Aligned_cols=69 Identities=25% Similarity=0.460 Sum_probs=41.4
Q ss_pred CCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCceeeC
Q 020564 219 DCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVAC 285 (324)
Q Consensus 219 ~C~~--C~l~Lvs~~hLarsyh-hl~p~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C 285 (324)
.|+. |+..+.+...|.+-.- |. .. ..-.|. .|.+.|..... .....|+|
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C 68 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHT-GE-----------------KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSC-SS-----------------CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcC-CC-----------------CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence 4555 8888888888765321 11 00 123574 68877764320 01235999
Q ss_pred CCCCcccccccchhhhhcCC
Q 020564 286 PKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 286 ~~C~~~fC~dCd~fihe~lh 305 (324)
+.|+..|=..=++-.|...|
T Consensus 69 ~~C~~~f~~~~~l~~H~~~H 88 (89)
T 2wbs_A 69 QKCDRAFSRSDHLALHMKRH 88 (89)
T ss_dssp SSSSCEESSHHHHHHHGGGG
T ss_pred CCCCcccCCHHHHHHHHHhh
Confidence 99999887766666665544
No 153
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.55 E-value=5.3 Score=29.90 Aligned_cols=45 Identities=31% Similarity=0.589 Sum_probs=33.2
Q ss_pred CCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCC
Q 020564 260 RSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNC 307 (324)
Q Consensus 260 ~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~C 307 (324)
.+...|.-|+.+|.-..+. .-.|+.|++..|-+|-+|.-+..-.|
T Consensus 23 ~~~r~CarC~~~LG~l~~~---g~~C~~Ck~rVC~~Crv~~~~~~W~C 67 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPK---TNTCRGCNHLVCRDCRIQESNGTWRC 67 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTT---TSEETTTTEECCTTSEEECSTTCEEE
T ss_pred CCccchhhhCccccccccC---CCcCcccChhhcccccccCCCCCEEE
Confidence 4677999999998654322 23699999999999999864443333
No 154
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=61.87 E-value=11 Score=27.74 Aligned_cols=34 Identities=26% Similarity=0.586 Sum_probs=27.0
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|...|= +-|-.|+.|+..+.....|.+-
T Consensus 17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 64 (106)
T 2ee8_A 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64 (106)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHH
Confidence 688999887664 3567899999999888888764
No 155
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.79 E-value=3.4 Score=22.53 Aligned_cols=25 Identities=28% Similarity=0.584 Sum_probs=20.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|-..=++-.|...|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h~ 27 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRVHT 27 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred CccCCCCCcccCCHHHHHHHHHhcC
Confidence 4899999999988888888876663
No 156
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=61.78 E-value=4.2 Score=26.49 Aligned_cols=20 Identities=20% Similarity=0.624 Sum_probs=14.1
Q ss_pred CCCCCCCCCceecCchhHHh
Q 020564 216 LPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLar 235 (324)
-|-.|+.|+..+.....|.+
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~ 47 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTK 47 (57)
T ss_dssp CCEECSSSSCEESSHHHHHH
T ss_pred CCccCCCCCchhcCHHHHHH
Confidence 34567778888877777764
No 157
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=61.48 E-value=3 Score=31.63 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=23.7
Q ss_pred ecCCccccC-eeEcCCCCcccccCCCCCCCCCcee
Q 020564 194 CHKEVKVGV-GYTCPRCKARVCELPTDCRICGLQL 227 (324)
Q Consensus 194 CH~~~~~~~-Gy~Cp~C~s~~C~lP~~C~~C~l~L 227 (324)
|+..+...+ .|.|+.|.+-|=... .||-||..|
T Consensus 8 C~~~l~~~~~~~~C~~C~~~~~~~a-fCPeCgq~L 41 (81)
T 2jrp_A 8 CHHALERNGDTAHCETCAKDFSLQA-LCPDCRQPL 41 (81)
T ss_dssp SCSCCEECSSEEECTTTCCEEEEEE-ECSSSCSCC
T ss_pred CCCccccCCCceECccccccCCCcc-cCcchhhHH
Confidence 555554433 445999999887777 899999764
No 158
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=61.26 E-value=12 Score=28.60 Aligned_cols=57 Identities=18% Similarity=0.126 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCC---CcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 69 SLQNALDLVQGLLSQIPSYGHREVLILYSALSTC---DPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 69 sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~---d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+.++|..|.+.++..| .-+|-|++-++... +..++.+.++.+++.||++.+|+-+.
T Consensus 12 ~~~~al~~~~n~~~~~~---~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV~~~~C~~s~ 71 (108)
T 2pd2_A 12 KVPQALRSVINLYNDIK---DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSI 71 (108)
T ss_dssp GHHHHHHHHHHHHHHST---TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHhhCC---CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcCEEEecHHHH
Confidence 46678888888888643 34666666333221 22367789999999999999998764
No 159
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.87 E-value=5.4 Score=27.60 Aligned_cols=34 Identities=26% Similarity=0.582 Sum_probs=27.6
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 61 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHH
Confidence 799999987764 3567899999999998888753
No 160
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=60.30 E-value=14 Score=32.97 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=36.6
Q ss_pred HHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch
Q 020564 74 LDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 74 L~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae 129 (324)
|+-|..+..+.| +-.+|||-||+- -|.|.++++.+|+++|+|=...+.+.
T Consensus 133 l~~av~av~~lp---r~~~lvlags~m---gg~i~~~v~~~~~~~i~vi~l~m~gs 182 (223)
T 1y7p_A 133 IAEAVKAVSRLH---RAEVLVLAGGIM---GGKITEEVKKLRKSGIRVISLSMFGS 182 (223)
T ss_dssp HHHHHHHGGGST---TEEEEEEESSBC---CTHHHHHHHHHGGGTCEEEEESCBSS
T ss_pred HHHHHHHHhhcc---ccceeeEecccc---cchHHHHHHHHHHCCCeEEEecCCCC
Confidence 444555555554 236999999985 47899999999999998866666543
No 161
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=59.84 E-value=4.3 Score=30.64 Aligned_cols=31 Identities=23% Similarity=0.606 Sum_probs=24.0
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCc----ccccccch
Q 020564 262 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK----HFCLECDI 298 (324)
Q Consensus 262 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~----~fC~dCd~ 298 (324)
...|-+|.+ ++.. .||+|..|.. .+|.+|-.
T Consensus 21 ~~~Cd~C~~~pI~G------~RykC~~C~d~~~yDLC~~C~~ 56 (82)
T 2fc7_A 21 GFKCDNCGIEPIQG------VRWHCQDCPPEMSLDFCDSCSD 56 (82)
T ss_dssp SCCCSSSCCSSEES------CEEEESSSCSSSCCEEEGGGTT
T ss_pred cCCCCCCCCCccee------ceEECCcCCCCcceecHHHHHh
Confidence 457999985 4432 4899999987 79999964
No 162
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=59.59 E-value=5.7 Score=29.53 Aligned_cols=42 Identities=33% Similarity=0.653 Sum_probs=30.6
Q ss_pred CCcccc--ccccccCCCCCCCceeeCC-----CCCcccccccchhhhhcCCCC
Q 020564 262 RSTCFG--CQQSLLSSGNKPGLYVACP-----KCKKHFCLECDIYIHESLHNC 307 (324)
Q Consensus 262 ~~~C~~--C~~~~~~~~~~~~~~~~C~-----~C~~~fC~dCd~fihe~lh~C 307 (324)
-..|-+ |+..+...+ +...-.|+ .|+..||..|-.--|+ ..|
T Consensus 25 ~~~CP~p~C~~~v~~~~--~~~~v~C~~~~~~~C~~~FC~~C~~~wH~--~~C 73 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEP--DQRKVTCEGGNGLGCGFAFCRECKEAYHE--GEC 73 (80)
T ss_dssp SCCCCSSSCCCCCCCCS--CTTSBCTTSSSTTCCSCCEETTTTEECCS--SCS
T ss_pred cEECCCCCCCcccEECC--CCCcCCCCCCCCCCCCCeeccccCccccC--Ccc
Confidence 557887 987765432 12235798 9999999999988887 555
No 163
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=59.39 E-value=3.4 Score=34.54 Aligned_cols=48 Identities=27% Similarity=0.497 Sum_probs=34.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh-cCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 316 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe-~lh~CpgC~~~~~~ 316 (324)
..-.|.-|...|.++ +++ .|++.||.+|-.-.-+ .-..||-|......
T Consensus 17 ~~~~C~IC~~~~~~p-------v~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALREA-------VQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcCc-------EEC-CCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 345899999777542 455 5999999999654433 33499999765443
No 164
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=58.98 E-value=5.6 Score=29.21 Aligned_cols=24 Identities=25% Similarity=0.816 Sum_probs=20.0
Q ss_pred eeEcCCCCcccccC---CCCCCCCCce
Q 020564 203 GYTCPRCKARVCEL---PTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~l---P~~C~~C~l~ 226 (324)
-|+|+.|+..+=.. ++.|+-||-.
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~R 54 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGHR 54 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCce
Confidence 79999999997654 4689999983
No 165
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=58.13 E-value=5 Score=31.84 Aligned_cols=29 Identities=21% Similarity=0.625 Sum_probs=25.0
Q ss_pred eeEcCCCCcccc---cCCCCCCCCCceecCch
Q 020564 203 GYTCPRCKARVC---ELPTDCRICGLQLVSSP 231 (324)
Q Consensus 203 Gy~Cp~C~s~~C---~lP~~C~~C~l~Lvs~~ 231 (324)
-|.|-.|+-.|. ..|+.||.|+..-|..|
T Consensus 67 p~~C~~CG~~F~~~~~kPsrCP~CkSe~Ie~P 98 (105)
T 2gmg_A 67 PAQCRKCGFVFKAEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CCBBTTTCCBCCCCSSCCSSCSSSCCCCBCCC
T ss_pred CcChhhCcCeecccCCCCCCCcCCCCCccCCc
Confidence 688999999997 57899999999888766
No 166
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.04 E-value=13 Score=26.41 Aligned_cols=43 Identities=21% Similarity=0.611 Sum_probs=30.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
....|..|...+.+. .---|++. ||.+|.. .+..||-|.....
T Consensus 14 ~~~~C~IC~~~~~~~--------v~~pCgH~~~C~~C~~----~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNW--------VLLPCRHTCLCDGCVK----YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCC--------EETTTTBCCSCTTHHH----HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCE--------EEECCCChhhhHHHHh----cCCCCCCCCcchh
Confidence 356899998554321 22368888 9999987 5789999987554
No 167
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=57.59 E-value=5.8 Score=28.35 Aligned_cols=25 Identities=32% Similarity=0.701 Sum_probs=20.1
Q ss_pred eEcCCCCcccccCCCCCCCCCceecCc
Q 020564 204 YTCPRCKARVCELPTDCRICGLQLVSS 230 (324)
Q Consensus 204 y~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 230 (324)
-.||+|+.. .|--.||.||....++
T Consensus 7 r~C~~CgvY--TLk~~CP~CG~~T~~~ 31 (60)
T 2apo_B 7 KKCPKCGLY--TLKEICPKCGEKTVIP 31 (60)
T ss_dssp EECTTTCCE--ESSSBCSSSCSBCBCC
T ss_pred eeCCCCCCE--eccccCcCCCCcCCCC
Confidence 579999876 5577899999987665
No 168
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=57.50 E-value=3.8 Score=25.95 Aligned_cols=8 Identities=50% Similarity=1.738 Sum_probs=5.6
Q ss_pred eeEcCCCC
Q 020564 203 GYTCPRCK 210 (324)
Q Consensus 203 Gy~Cp~C~ 210 (324)
||+||.|.
T Consensus 5 GFiCP~C~ 12 (34)
T 3mjh_B 5 GFICPQCM 12 (34)
T ss_dssp EEECTTTC
T ss_pred ccCCcHHH
Confidence 78887654
No 169
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.43 E-value=4.5 Score=25.18 Aligned_cols=24 Identities=29% Similarity=0.818 Sum_probs=19.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRTH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHHC
T ss_pred CeeCCCCCCccCCHHHHHHHHHHh
Confidence 488999999888888888886655
No 170
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=56.85 E-value=2.1 Score=32.18 Aligned_cols=16 Identities=44% Similarity=0.991 Sum_probs=13.5
Q ss_pred cccccccchhh-hhcCC
Q 020564 290 KHFCLECDIYI-HESLH 305 (324)
Q Consensus 290 ~~fC~dCd~fi-he~lh 305 (324)
+.||..||+|+ ||+..
T Consensus 3 kYyCdYCd~~lt~Ds~s 19 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPS 19 (77)
T ss_pred CcccccCCceecCCCHH
Confidence 57999999999 99753
No 171
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.80 E-value=7.2 Score=27.81 Aligned_cols=30 Identities=20% Similarity=0.754 Sum_probs=23.0
Q ss_pred Ccccccccc-ccCCCCCCCceeeCCCCCc-ccccccch
Q 020564 263 STCFGCQQS-LLSSGNKPGLYVACPKCKK-HFCLECDI 298 (324)
Q Consensus 263 ~~C~~C~~~-~~~~~~~~~~~~~C~~C~~-~fC~dCd~ 298 (324)
..|-+|.+. +.. .||+|..|.. .+|.+|-.
T Consensus 12 ~~Cd~C~~~pi~G------~RykC~~C~d~DLC~~C~~ 43 (63)
T 2e5r_A 12 VECSYCHSESMMG------FRYRCQQCHNYQLCQDCFW 43 (63)
T ss_dssp SCCSSSCCCSSCS------CEEEESSCSSCEECHHHHH
T ss_pred CCCcCCCCcceec------ceEEecCCCCchhHHHHHh
Confidence 689999864 432 5999999965 49999954
No 172
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=56.35 E-value=6.2 Score=31.33 Aligned_cols=26 Identities=31% Similarity=0.690 Sum_probs=14.0
Q ss_pred ccccccccccCCCCCCCceeeCCCCCccc
Q 020564 264 TCFGCQQSLLSSGNKPGLYVACPKCKKHF 292 (324)
Q Consensus 264 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~f 292 (324)
.|-.|...|.+..+ ..-+||.|++..
T Consensus 69 ~C~~CG~~F~~~~~---kPsrCP~CkSe~ 94 (105)
T 2gmg_A 69 QCRKCGFVFKAEIN---IPSRCPKCKSEW 94 (105)
T ss_dssp BBTTTCCBCCCCSS---CCSSCSSSCCCC
T ss_pred ChhhCcCeecccCC---CCCCCcCCCCCc
Confidence 57777777722111 123577777654
No 173
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=56.27 E-value=3.8 Score=22.43 Aligned_cols=24 Identities=21% Similarity=0.310 Sum_probs=18.9
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRGH 26 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTTC
T ss_pred CcCCCCCCcccCCHHHHHHHHHhc
Confidence 489999999998777777776665
No 174
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.02 E-value=7.1 Score=26.71 Aligned_cols=34 Identities=18% Similarity=0.555 Sum_probs=27.2
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|...|- +-|-.|+.|+..+...-.|.+-
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H 56 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHH
Confidence 699999987664 3456899999999998888753
No 175
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.73 E-value=6.5 Score=24.45 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=19.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred CeECCCCCCeeCCHHHHHHHhhhcC
Confidence 4788888888888878777776663
No 176
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=55.49 E-value=5.4 Score=24.82 Aligned_cols=24 Identities=21% Similarity=0.591 Sum_probs=18.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 478888888888777777776655
No 177
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.37 E-value=5.7 Score=24.64 Aligned_cols=24 Identities=25% Similarity=0.730 Sum_probs=18.8
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred CeeCCCCCchhCCHHHHHHHHHHc
Confidence 478888888888888887776665
No 178
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=60.30 E-value=2.5 Score=23.37 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=19.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|-..-++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~h 26 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRIH 26 (30)
Confidence 388999999998888887787665
No 179
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=55.05 E-value=3.7 Score=22.27 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=18.2
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~H 26 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRTH 26 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHC
T ss_pred CccCCCcChhhCCHHHHHHHHHHc
Confidence 489999999987776666666554
No 180
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.96 E-value=2.8 Score=28.63 Aligned_cols=10 Identities=20% Similarity=0.687 Sum_probs=5.1
Q ss_pred eeEcCCCCcc
Q 020564 203 GYTCPRCKAR 212 (324)
Q Consensus 203 Gy~Cp~C~s~ 212 (324)
-|.|++|+..
T Consensus 18 ~~~C~~C~k~ 27 (73)
T 2ctu_A 18 SQKCSKCGII 27 (73)
T ss_dssp EEECSSSCCE
T ss_pred CeeCCcccch
Confidence 4666555433
No 181
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=59.96 E-value=2.5 Score=23.33 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=19.8
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|+..|-..=++-.|...|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQHT 26 (29)
Confidence 3789999999988888877876663
No 182
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=54.93 E-value=7.6 Score=32.10 Aligned_cols=47 Identities=23% Similarity=0.599 Sum_probs=32.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhhc-CCCCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHES-LHNCPGCESLRHSN 317 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~-lh~CpgC~~~~~~~ 317 (324)
..|.-|...|.++ .. -.|++.||.+|=.-.-+. -..||-|.......
T Consensus 79 ~~C~IC~~~~~~p-------v~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQP-------VT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSE-------EE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCC-------EE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 4699998777543 22 479999999995433333 23799998755443
No 183
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=54.90 E-value=5.3 Score=21.96 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=19.9
Q ss_pred eeCCCCCcccccccchhhh-hcCCC
Q 020564 283 VACPKCKKHFCLECDIYIH-ESLHN 306 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fih-e~lh~ 306 (324)
|.|+.|+..|-..-++..| ...|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred cCCcccCcccCChHHHHHHHHHHcc
Confidence 8899999999888888888 66663
No 184
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=54.67 E-value=9.6 Score=33.66 Aligned_cols=53 Identities=8% Similarity=-0.131 Sum_probs=34.6
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhhhcCCCCCCCCCCCCCCCcccC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIHESLHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~-fihe~lh~CpgC~~~~~~~~~~~~ 322 (324)
.-.|.-|...|.+|. ...|++.||..|=. ++.+.-..||.|........++.|
T Consensus 208 ~~~c~i~~~~~~dPv--------~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n 261 (281)
T 2c2l_A 208 YLCGKISFELMREPC--------ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPN 261 (281)
T ss_dssp TTBCTTTCSBCSSEE--------ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEEC
T ss_pred ccCCcCcCCHhcCCe--------ECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCccc
Confidence 457999987776542 23599999999943 333334459999875554444433
No 185
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=54.67 E-value=5.1 Score=24.95 Aligned_cols=24 Identities=25% Similarity=0.591 Sum_probs=19.7
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKIH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTGG
T ss_pred CcCCCCCcchhCCHHHHHHHHHhc
Confidence 588999999998888888887665
No 186
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=54.56 E-value=9 Score=28.07 Aligned_cols=27 Identities=22% Similarity=0.695 Sum_probs=21.4
Q ss_pred ceeeCCCCCcccccccchhhhhcCCCCCCCCC
Q 020564 281 LYVACPKCKKHFCLECDIYIHESLHNCPGCES 312 (324)
Q Consensus 281 ~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~ 312 (324)
..|.|+.|+..|=++ ..|.+ .||-|..
T Consensus 27 v~Y~C~~CG~~~e~~----~~d~i-rCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLS----RTDAV-RCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCC----TTSTT-CCSSSCC
T ss_pred EEEECCCCCCcceeC----CCCCc-cCCCCCc
Confidence 469999999998766 34556 5999987
No 187
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=54.01 E-value=2.4 Score=23.13 Aligned_cols=24 Identities=25% Similarity=0.564 Sum_probs=19.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|-..-+.-.|...|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHHh
Confidence 489999999998877777776554
No 188
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.97 E-value=5 Score=27.43 Aligned_cols=14 Identities=36% Similarity=0.930 Sum_probs=11.5
Q ss_pred CCceeeCCCCCccc
Q 020564 279 PGLYVACPKCKKHF 292 (324)
Q Consensus 279 ~~~~~~C~~C~~~f 292 (324)
++.+|.||+|+..|
T Consensus 9 ~~~~~~CPrCn~~f 22 (49)
T 2e72_A 9 DGGRKICPRCNAQF 22 (49)
T ss_dssp CSSCCCCTTTCCCC
T ss_pred cCCceeCCcccccc
Confidence 34689999999887
No 189
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.63 E-value=3.7 Score=28.81 Aligned_cols=43 Identities=23% Similarity=0.541 Sum_probs=31.9
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 312 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~ 312 (324)
....|.-|...+.+ .-..|++.||.+|-.-.-+.-..||-|..
T Consensus 14 ~~~~C~IC~~~~~~---------~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~ 56 (70)
T 2ecn_A 14 DEEECCICMDGRAD---------LILPCAHSFCQKCIDKWSDRHRNCPICRL 56 (70)
T ss_dssp CCCCCSSSCCSCCS---------EEETTTEEECHHHHHHSSCCCSSCHHHHH
T ss_pred CCCCCeeCCcCccC---------cccCCCCcccHHHHHHHHHCcCcCCCcCC
Confidence 45689999866642 22369999999997655556788999965
No 190
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.56 E-value=8.7 Score=23.86 Aligned_cols=24 Identities=25% Similarity=0.656 Sum_probs=19.9
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTT
T ss_pred CeECCcCCCccCCHHHHHHHHHHh
Confidence 588999999998888888887666
No 191
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=53.27 E-value=6.2 Score=27.36 Aligned_cols=34 Identities=38% Similarity=0.803 Sum_probs=27.2
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
.|.|+.|...|- +-|-.|+.|+..+.....|.+-
T Consensus 17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H 64 (74)
T 2lce_A 17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64 (74)
T ss_dssp SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHH
T ss_pred CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHH
Confidence 689999987764 3456899999999998888753
No 192
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.26 E-value=2.9 Score=31.28 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.2
Q ss_pred eeEcCCCCcccc----------------cCCCCCCCCCceecCchhHHhh--hcc
Q 020564 203 GYTCPRCKARVC----------------ELPTDCRICGLQLVSSPHLARS--YHH 239 (324)
Q Consensus 203 Gy~Cp~C~s~~C----------------~lP~~C~~C~l~Lvs~~hLars--yhh 239 (324)
-|.|++|...|- +-|-.|+.|+..+....+|.+- .||
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence 799999999887 4467899999999999999864 455
No 193
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.25 E-value=5.9 Score=24.65 Aligned_cols=24 Identities=21% Similarity=0.527 Sum_probs=18.7
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 488888888888887777776665
No 194
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=53.21 E-value=18 Score=27.82 Aligned_cols=57 Identities=7% Similarity=0.088 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCCceEEEEE-eCCCCC--CcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 69 SLQNALDLVQGLLSQIPSYGHREVLILY-SALSTC--DPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 69 sL~naL~~A~~~L~~~p~~~~reILil~-gS~~t~--d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+.++|..|.+.++..| .-+|.|++ |..... +..++.+.++.|++.||++.+|+-+.
T Consensus 17 ~~~~~L~~a~n~~~~~~---~~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV~~~~C~~~l 76 (113)
T 1l1s_A 17 RVLLLISNVRNLMADLE---SVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNTL 76 (113)
T ss_dssp HHHHHHHHHHHHHHHCS---SEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEEEechHHHHHHcCChHHHHHHHHHHCCCEEEecHHHH
Confidence 56678888888887754 24565555 322111 33467788999999999999998753
No 195
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=53.19 E-value=2.1 Score=33.73 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCccccccccccCCC----------CCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSG----------NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESL 313 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~----------~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~ 313 (324)
...|.-|...|...- .++.....-..|++.|+.+|=.---..-..||-|-..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 457999988876431 0011112335799999999965555566789999653
No 196
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.06 E-value=6.3 Score=24.58 Aligned_cols=24 Identities=21% Similarity=0.544 Sum_probs=18.3
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGGG
T ss_pred CeeCcccCchhCCHHHHHHHHHhc
Confidence 478888888888777777776655
No 197
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=53.05 E-value=6 Score=24.68 Aligned_cols=24 Identities=25% Similarity=0.678 Sum_probs=20.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|-..=++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRMH 35 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGGG
T ss_pred CeECCCCCcccCCHHHHHHHHHHc
Confidence 489999999998888888887665
No 198
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=52.98 E-value=3.4 Score=27.79 Aligned_cols=25 Identities=28% Similarity=0.745 Sum_probs=16.6
Q ss_pred eeEcCCCCc-ccccCC----CCCCCCCcee
Q 020564 203 GYTCPRCKA-RVCELP----TDCRICGLQL 227 (324)
Q Consensus 203 Gy~Cp~C~s-~~C~lP----~~C~~C~l~L 227 (324)
-+.||.|++ ..=.-+ .+|+.||+.+
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 567999987 322222 4889999865
No 199
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.74 E-value=7.6 Score=27.31 Aligned_cols=37 Identities=22% Similarity=0.547 Sum_probs=25.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
...|..|.. . ..|.||+|.-.||--=-...|... |.+
T Consensus 12 ~~~C~vC~~-~--------~kY~CPrC~~~yCSl~C~k~Hk~~--C~~ 48 (56)
T 2yqq_A 12 TVVCVICLE-K--------PKYRCPACRVPYCSVVCFRKHKEQ--CNP 48 (56)
T ss_dssp CCCCTTTCS-C--------CSEECTTTCCEESSHHHHHHHHHH--CCC
T ss_pred CCccCcCcC-C--------CeeeCCCCCCCeeCHHHHHHHHhh--CcC
Confidence 347999985 2 359999999999973334566654 544
No 200
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.65 E-value=6.9 Score=24.29 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5889999998888888888876663
No 201
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.52 E-value=10 Score=28.40 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=29.4
Q ss_pred eeEcCCCCccc-c-------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARV-C-------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~-C-------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|++|+..| - +-|-.|..||..+...-+|.+-
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHH
T ss_pred CcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHH
Confidence 69999999988 3 4577999999999999999765
No 202
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.52 E-value=6.7 Score=24.38 Aligned_cols=24 Identities=25% Similarity=0.499 Sum_probs=18.3
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRIH 35 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTTT
T ss_pred CeECCCCCceeCCHHHHHHHHHHh
Confidence 478888888888777777776665
No 203
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.31 E-value=9.7 Score=23.57 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTC
T ss_pred CeECCCCCchhCChHHHHHHHhhcC
Confidence 4889999998888888888877663
No 204
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=52.28 E-value=2.9 Score=24.17 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=20.1
Q ss_pred eeCCCCCcccccccchhhhhcCCC
Q 020564 283 VACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
|+|+.|++.|-..-++-.|...|.
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~H~ 26 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKTAF 26 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred CCCCCCCcccCCHHHHHHHHHHHc
Confidence 789999999988888888877764
No 205
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.03 E-value=7.5 Score=24.13 Aligned_cols=25 Identities=24% Similarity=0.600 Sum_probs=20.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeeCcccCcccCChHHHHHHHHHhC
Confidence 5899999999988888888877763
No 206
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=52.00 E-value=28 Score=31.16 Aligned_cols=70 Identities=14% Similarity=0.044 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCCCCCCC------ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc-----hHHHHHHHHHhhC
Q 020564 73 ALDLVQGLLSQIPSYGH------REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA-----EMFICKHLCQDTG 141 (324)
Q Consensus 73 aL~~A~~~L~~~p~~~~------reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga-----e~~iLk~ia~~Tg 141 (324)
|.++|...++..+.... ++|+|+-|+.+ |-||=.-++..|+..|.+|.|+-++. +.....++++..|
T Consensus 36 g~ava~~i~~~~~~~~~~~~~~~~~v~VlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~g 113 (246)
T 1jzt_A 36 GFSVAQAVCRQFPLRGKTETEKGKHVFVIAGPGN--NGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFK 113 (246)
T ss_dssp HHHHHHHHHHHSCCSSCCHHHHTCEEEEEECSSH--HHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccccccccccCCCeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEcCCCCCCHHHHHHHHHHHHcC
Confidence 34455444555543212 57999888653 46787889999999999999986653 2233445666777
Q ss_pred Cee
Q 020564 142 GSY 144 (324)
Q Consensus 142 G~Y 144 (324)
+..
T Consensus 114 ~~~ 116 (246)
T 1jzt_A 114 VPV 116 (246)
T ss_dssp CCE
T ss_pred CcE
Confidence 764
No 207
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.90 E-value=8.7 Score=23.87 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=19.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRTH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred CcCCCccChhhCChHHHHHHHHHh
Confidence 488888888888888888887665
No 208
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=51.69 E-value=22 Score=26.98 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=40.6
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCC--C----Cc---ccHHHHHHHHHhcCcEEEEEEccchH
Q 020564 65 SGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALST--C----DP---GDIMETIQKCKESKIRCSVIGLSAEM 130 (324)
Q Consensus 65 ~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t--~----d~---g~i~~ti~~akk~~IrV~vI~Lgae~ 130 (324)
.|.....+||.+|...+.. ++..+|-||+-.+.. . .| .++.+.++.+.+.||+|++++.+.+.
T Consensus 13 ~~~~~~~~al~~a~~~~~~---~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~~l~~ 84 (117)
T 1jx7_A 13 YGSESLFNSLRLAIALREQ---ESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDG 84 (117)
T ss_dssp TTCSHHHHHHHHHHHHHHH---CTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhc---CCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHHHHHH
Confidence 3555677788888887765 233255555521111 0 11 36778889999999999999886553
No 209
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=51.52 E-value=6 Score=23.16 Aligned_cols=24 Identities=25% Similarity=0.652 Sum_probs=20.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|-..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred CccCCCCCcccCcHHHHHHHHHHh
Confidence 589999999998888888787665
No 210
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=51.27 E-value=8.6 Score=27.35 Aligned_cols=33 Identities=24% Similarity=0.654 Sum_probs=23.2
Q ss_pred CCCcccccccc--ccCCCCCCCceeeCCCCCccccc-ccchhhh
Q 020564 261 SRSTCFGCQQS--LLSSGNKPGLYVACPKCKKHFCL-ECDIYIH 301 (324)
Q Consensus 261 ~~~~C~~C~~~--~~~~~~~~~~~~~C~~C~~~fC~-dCd~fih 301 (324)
....|..|... .+ ..|.||+|+..||- .|-. .|
T Consensus 10 ~~~~C~vC~~~~~~~-------akY~CPrC~~rYCSl~C~k-~H 45 (59)
T 1x4s_A 10 PAGPCGFCPAGEVQP-------ARYTCPRCNAPYCSLRCYR-TH 45 (59)
T ss_dssp CCEEECSSCTTCCEE-------ECEECTTTCCEESSHHHHH-HH
T ss_pred CCCcCcCCCCCcCCC-------ccccCcCCCCCccChHHHH-HH
Confidence 34589999741 11 35999999999996 5544 45
No 211
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=51.26 E-value=2.5 Score=32.02 Aligned_cols=77 Identities=22% Similarity=0.486 Sum_probs=51.6
Q ss_pred CCCCCC--CCceecCchhHHhh--hcccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCce
Q 020564 217 PTDCRI--CGLQLVSSPHLARS--YHHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLY 282 (324)
Q Consensus 217 P~~C~~--C~l~Lvs~~hLars--yhhl~p~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~ 282 (324)
|-.|+. |+..+.+...|.+- .|+- - ..-.|. .|.+.|..... .....
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~-----------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~ 66 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTG--E-----------------KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHHT--T-----------------CCEECCSTTCCCEESSHHHHHHHHHHHHCCCC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhCC--C-----------------CCccCCCCCCcCccCCHHHHHHHHHHcCCCCC
Confidence 345665 88888888888653 2331 1 123587 79888865320 12235
Q ss_pred eeCCCCCcccccccchhhhhcCC------CC--CCCCC
Q 020564 283 VACPKCKKHFCLECDIYIHESLH------NC--PGCES 312 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fihe~lh------~C--pgC~~ 312 (324)
|.|+.|+..|=..=++-.|...| .| |.|..
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 104 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQK 104 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCC
T ss_pred ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcc
Confidence 99999999999888888886554 58 78864
No 212
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.22 E-value=6.2 Score=22.99 Aligned_cols=25 Identities=28% Similarity=0.446 Sum_probs=21.3
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|=..=++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLVHG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHhc
Confidence 5999999999998888888887763
No 213
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=51.22 E-value=6.7 Score=24.31 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=19.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGG
T ss_pred CeECCccccccCChHHHHHHHHHh
Confidence 588999998888888888887665
No 214
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=51.02 E-value=4 Score=29.82 Aligned_cols=66 Identities=21% Similarity=0.344 Sum_probs=39.7
Q ss_pred CCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccc--cccccccCCCC--------CCCceeeCCCC
Q 020564 221 RICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCF--GCQQSLLSSGN--------KPGLYVACPKC 288 (324)
Q Consensus 221 ~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~--------~~~~~~~C~~C 288 (324)
+.|+..+....+|.+-. |+- .. .-.|. .|.+.|..... .....|+|+.|
T Consensus 21 ~~C~~~f~~~~~l~~H~~~h~~--~~-----------------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 81 (100)
T 2ebt_A 21 PGCTKVYTKSSHLKAHLRTHTG--EK-----------------PYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81 (100)
T ss_dssp SSCCCEESCHHHHHHHHHHHSC--CC-----------------CEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred CCCCCcccCHHHHHHHHHHhCC--CC-----------------CeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence 34788888877776532 221 11 22464 67777754310 11235899999
Q ss_pred CcccccccchhhhhcCC
Q 020564 289 KKHFCLECDIYIHESLH 305 (324)
Q Consensus 289 ~~~fC~dCd~fihe~lh 305 (324)
+..|=..=++-.|...|
T Consensus 82 ~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 82 NRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCBCSSHHHHHHHHHHH
T ss_pred cCccCCHHHHHHHHHHh
Confidence 99987777777666544
No 215
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.98 E-value=5.4 Score=24.84 Aligned_cols=24 Identities=25% Similarity=0.610 Sum_probs=19.3
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 488888888888888887777665
No 216
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=50.80 E-value=5.3 Score=23.10 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|-..-++..|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGT
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999998888888877663
No 217
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.51 E-value=5.9 Score=24.57 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.5
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGGG
T ss_pred CeECCCcChhhCCHHHHHHHHHHc
Confidence 478888888888887777776655
No 218
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.43 E-value=10 Score=26.16 Aligned_cols=24 Identities=38% Similarity=0.747 Sum_probs=18.6
Q ss_pred eeEcCCCCcccccCCCCCCCCCce
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~ 226 (324)
-++||+|++..=.=-..|.-||.+
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 689999999933233689999977
No 219
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.25 E-value=6.4 Score=24.45 Aligned_cols=25 Identities=24% Similarity=0.590 Sum_probs=19.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKVHT 36 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTTSC
T ss_pred CeECCCCCCccCCHHHHHHHHHhhC
Confidence 4888888888888888888877663
No 220
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=50.25 E-value=27 Score=31.77 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=46.4
Q ss_pred HHHHHHHHhhCCCCCC----CceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc----hHHHHHHHHHhhCCee
Q 020564 73 ALDLVQGLLSQIPSYG----HREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSY 144 (324)
Q Consensus 73 aL~~A~~~L~~~p~~~----~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga----e~~iLk~ia~~TgG~Y 144 (324)
|.++|...++..+... .++|+|+.|..+ |-||=.-++..|+..|.+|.|+-++. +.....++++..|+..
T Consensus 59 G~ava~~i~~~~~~~~~~~~~~~VlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (265)
T 2o8n_A 59 GLSCATAIAKAYPPTSMSKSPPTVLVICGPGN--NGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPF 136 (265)
T ss_dssp HHHHHHHHHHHSCGGGSSSSSCEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCSCCSSHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHcccccccCCCCeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEeCCCCCHHHHHHHHHHHHcCCcE
Confidence 3444444445444211 157999888653 46788889999999999999986642 3345556677778764
No 221
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.21 E-value=7.7 Score=27.09 Aligned_cols=34 Identities=29% Similarity=0.722 Sum_probs=27.6
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|...|- +-|-.|+.|+..+....+|.+-
T Consensus 18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 65 (77)
T 2cot_A 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65 (77)
T ss_dssp SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHH
Confidence 689999987765 3456899999999999988764
No 222
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.14 E-value=8 Score=26.42 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=12.2
Q ss_pred eeeCCCCCcccccccchhhhhc
Q 020564 282 YVACPKCKKHFCLECDIYIHES 303 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~ 303 (324)
.|+|+.|+..|=..=++..|..
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~ 58 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMK 58 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHH
Confidence 3666666666655555544443
No 223
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.99 E-value=9.6 Score=23.52 Aligned_cols=24 Identities=33% Similarity=0.825 Sum_probs=19.7
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTT
T ss_pred CeECCCcCcccCCHHHHHHHHHHh
Confidence 488999998888888888887666
No 224
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=49.65 E-value=8.1 Score=29.98 Aligned_cols=47 Identities=26% Similarity=0.537 Sum_probs=32.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh-cCCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 316 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe-~lh~CpgC~~~~~~ 316 (324)
...|.-|...+.++ .. ..|++.||.+|=.-.-+ .-..||-|......
T Consensus 23 ~~~C~IC~~~~~~p-------~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADP-------VE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSE-------EE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCc-------EE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 34799998777542 23 37999999999543333 35689999875443
No 225
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.35 E-value=10 Score=26.41 Aligned_cols=38 Identities=24% Similarity=0.495 Sum_probs=30.7
Q ss_pred eeEcCCCCcccc-----------------cCCCCCCCCCceecCchhHHhhh--ccc
Q 020564 203 GYTCPRCKARVC-----------------ELPTDCRICGLQLVSSPHLARSY--HHL 240 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------------~lP~~C~~C~l~Lvs~~hLarsy--hhl 240 (324)
-|.|+.|...|- +-|-.|+.|+..+.....|.+-. +|-
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 63 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence 699999998764 45779999999999999998653 454
No 226
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=48.99 E-value=7.8 Score=25.47 Aligned_cols=42 Identities=17% Similarity=0.367 Sum_probs=27.2
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhh-cCC
Q 020564 264 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHE-SLH 305 (324)
Q Consensus 264 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCd~fihe-~lh 305 (324)
.|.-|.+.|.... -.....|.|+.|+..|=..=++-.|. ..|
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H 54 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred cCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence 4777877776431 01223588888888887777777773 555
No 227
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=48.70 E-value=4.8 Score=28.20 Aligned_cols=48 Identities=15% Similarity=0.346 Sum_probs=34.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
...|..|...+.+ ..+.=.-|++. ||.+|..-+.+.-..||.|-....
T Consensus 7 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 7 LKPCSLCEKRPRD------GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GSBCTTTSSSBSC------EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CCCCcccCCcCCC------eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 4579999854432 12222468887 999999988887789999976543
No 228
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=48.68 E-value=5.7 Score=24.80 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=16.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHHH
T ss_pred CcccCccCcccCCHHHHHHHHHHc
Confidence 477777777777777776665444
No 229
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.67 E-value=7.7 Score=24.06 Aligned_cols=24 Identities=33% Similarity=0.693 Sum_probs=19.5
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMVH 35 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGGG
T ss_pred CccCCCccchhCCHHHHHHHHHHh
Confidence 488999999888888888887665
No 230
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.61 E-value=3.6 Score=24.15 Aligned_cols=24 Identities=25% Similarity=0.571 Sum_probs=20.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|-..-.+-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIH 32 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHHh
Confidence 599999999998888887777655
No 231
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=48.27 E-value=31 Score=31.14 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=37.0
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchH-----HHHHHHHHhhCCee
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM-----FICKHLCQDTGGSY 144 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~-----~iLk~ia~~TgG~Y 144 (324)
++|+|+-|+.+ |-||=.-++..|+..|.+|.++.++.+. ..=.++.+..|+..
T Consensus 86 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~a~~~~~~~~~~g~~~ 143 (259)
T 3d3k_A 86 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 143 (259)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCBCSSCCHHHHHHHHHHTTSSCEE
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEecCCCCCHHHHHHHHHHHHcCCCc
Confidence 57999888553 4678788999999999999998776321 12223444567654
No 232
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.18 E-value=7.3 Score=24.18 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=18.8
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeeCCCcCCccCCHHHHHHHHHHh
Confidence 488888888888888877776655
No 233
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.89 E-value=7.8 Score=23.97 Aligned_cols=24 Identities=29% Similarity=0.631 Sum_probs=18.2
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeECCCCChhhCCHHHHHHHHHhc
Confidence 488888888888777777776555
No 234
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=47.82 E-value=11 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.376 Sum_probs=22.9
Q ss_pred eeEcCCCCcccc----------------cCCCCCCCCCceecCchhHHh
Q 020564 203 GYTCPRCKARVC----------------ELPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 203 Gy~Cp~C~s~~C----------------~lP~~C~~C~l~Lvs~~hLar 235 (324)
-|.|+.|+..|- +-|-.|+.|+..+.+...|.+
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~ 58 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTA 58 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHH
T ss_pred ceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHH
Confidence 688888876543 234478888888887777764
No 235
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=47.30 E-value=9.9 Score=31.23 Aligned_cols=38 Identities=29% Similarity=0.675 Sum_probs=29.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhh
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIH 301 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fih 301 (324)
+...|.-|+.+|.-.++ ..-.|..|+..+|..|-+++.
T Consensus 54 ~~~~C~~C~~~~g~l~~---~g~~C~~C~~~VC~~C~~~~~ 91 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGS---ASVVCEDCKKNVCTKCGVETS 91 (134)
T ss_dssp SSSBCSSSCCBCSTTSC---CEEECTTTCCEEETTSEEECC
T ss_pred CCccccccCCCcccccC---CCCCCCCCCcccccccCCccC
Confidence 46789999999842221 246899999999999999874
No 236
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.21 E-value=7.8 Score=23.98 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=16.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTTT
T ss_pred CcCCCCCCCccCCHHHHHHHHHhc
Confidence 367777777777776776776655
No 237
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.17 E-value=4.9 Score=25.03 Aligned_cols=24 Identities=25% Similarity=0.540 Sum_probs=18.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeECCCCCCeeCChHHHHHHHHHc
Confidence 488888888888888877776554
No 238
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=47.01 E-value=11 Score=26.95 Aligned_cols=37 Identities=30% Similarity=0.659 Sum_probs=27.7
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh--hcc
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS--YHH 239 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars--yhh 239 (324)
-|.|+.|+..|- +-|-.|+.|+..+.+.-.|.+- .||
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~ 55 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence 488888887664 3466899999999888888753 455
No 239
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=46.92 E-value=7.7 Score=24.51 Aligned_cols=24 Identities=33% Similarity=0.434 Sum_probs=18.3
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKLSH 35 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGGGS
T ss_pred CeeCCCCCcccCCHHHHHHHHHhc
Confidence 578888888887777777776665
No 240
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.42 E-value=15 Score=26.43 Aligned_cols=39 Identities=28% Similarity=0.770 Sum_probs=27.9
Q ss_pred CCCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|.. |.+.- -..|.|..|++.||.+ ==+..-|.|++
T Consensus 11 ~~~~Cs~~~Ck~~~-------ll~f~C~~C~~~FC~~---HR~~e~H~C~~ 51 (63)
T 1x4v_A 11 FTNKCERAGCRQRE-------MMKLTCERCSRNFCIK---HRHPLDHDCSG 51 (63)
T ss_dssp TCCCCCSTTCCCCC-------SSCCBCSSSCCBCCHH---HHSTTSSCCCS
T ss_pred cCCCCCccCCCCCC-------ccceECCCCCcccCcc---cCCccCCcCCC
Confidence 3457888 97431 1258999999999985 33456799986
No 241
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.41 E-value=5.9 Score=27.59 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=33.1
Q ss_pred CCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC--------CCCceeeCCC
Q 020564 220 CRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN--------KPGLYVACPK 287 (324)
Q Consensus 220 C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~--------~~~~~~~C~~ 287 (324)
|+.|+..+.+..+|.+-. +|.- -+ .-.|.- |.+.|..... .....|.|+.
T Consensus 12 ~~~C~~~f~~~~~L~~H~~~~H~~-~~-----------------~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 73 (79)
T 2dlk_A 12 FPGCGRIFSNRQYLNHHKKYQHIH-QK-----------------SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73 (79)
T ss_dssp STTTCCEESSHHHHHHHHHHGGGS-CC-----------------CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred CCCCcCccCCHHHHHHHHHHHhCC-CC-----------------CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence 556999999999988753 3431 11 224665 7777754310 0123488888
Q ss_pred CCccc
Q 020564 288 CKKHF 292 (324)
Q Consensus 288 C~~~f 292 (324)
|++.|
T Consensus 74 C~k~F 78 (79)
T 2dlk_A 74 SGPSS 78 (79)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 88766
No 242
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.30 E-value=10 Score=23.50 Aligned_cols=24 Identities=25% Similarity=0.682 Sum_probs=19.5
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKIH 35 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGGT
T ss_pred CeECCCCCchhCCHHHHHHHHHHh
Confidence 488888988888888888887666
No 243
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=46.16 E-value=8.3 Score=32.44 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=28.8
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhh
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYI 300 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fi 300 (324)
....|.-|+.+|.-..+ ..-.|..|+..+|..|-+|.
T Consensus 67 ~~~~C~~C~~~fg~l~~---~g~~C~~C~~~VC~~C~~~~ 103 (153)
T 2zet_C 67 NETHCARCLQPYRLLLN---SRRQCLECSLFVCKSCSHAH 103 (153)
T ss_dssp GGTBCTTTCCBGGGCSS---CCEECTTTCCEECGGGEECC
T ss_pred CCccchhhcCccccccC---CCCcCCCCCchhhccccccc
Confidence 46789999998754332 23579999999999999764
No 244
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=45.75 E-value=7.2 Score=37.74 Aligned_cols=46 Identities=20% Similarity=0.403 Sum_probs=33.4
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchhhhh-cCCCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCESLRHS 316 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe-~lh~CpgC~~~~~~ 316 (324)
..|.-|...+.++ ....|++.||.+|-.-.-+ .-..||-|-.....
T Consensus 333 ~~C~ICle~~~~p--------v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 333 QLCKICAENDKDV--------KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SBCTTTSSSBCCE--------EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCccCcCCCCe--------EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 5899998666431 3457999999999755444 57899999875443
No 245
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=45.31 E-value=11 Score=20.32 Aligned_cols=19 Identities=26% Similarity=0.600 Sum_probs=15.3
Q ss_pred CCCCCCCCceecCchhHHh
Q 020564 217 PTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLar 235 (324)
|-.|+.|+..+....+|.+
T Consensus 2 ~~~C~~C~~~f~~~~~l~~ 20 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKR 20 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHH
T ss_pred CeECCCCCcccCCHHHHHH
Confidence 4578889999988888875
No 246
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.72 E-value=10 Score=23.41 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=19.2
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHHh
Confidence 488888888888888888886665
No 247
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.41 E-value=7.6 Score=24.10 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=17.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|-..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHT
T ss_pred CcCCCcCCchhCCHHHHHHHHHHc
Confidence 477888888887777777775554
No 248
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=44.39 E-value=5.7 Score=24.78 Aligned_cols=24 Identities=25% Similarity=0.577 Sum_probs=17.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred ceECCCCCchhCCHHHHHHHHHHc
Confidence 477888888877777777665544
No 249
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=44.32 E-value=5.9 Score=28.13 Aligned_cols=18 Identities=33% Similarity=0.728 Sum_probs=13.4
Q ss_pred CccccCeeEcCCCCcccc
Q 020564 197 EVKVGVGYTCPRCKARVC 214 (324)
Q Consensus 197 ~~~~~~Gy~Cp~C~s~~C 214 (324)
.+.+.+.|.||+|+..||
T Consensus 24 ~~~~~~~y~C~~C~~~FC 41 (59)
T 1z60_A 24 ELKDQHVYVCAVCQNVFC 41 (59)
T ss_dssp ECTTSEEECCTTTTCCBC
T ss_pred ccCCCccEECCccCcCcc
Confidence 333442499999999999
No 250
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=44.25 E-value=8.4 Score=22.97 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|=..-++..|...|.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred ceECCCCCcccCCHHHHHHHHHHcC
Confidence 5999999999999888889988775
No 251
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=44.15 E-value=14 Score=26.54 Aligned_cols=33 Identities=30% Similarity=0.647 Sum_probs=24.9
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLar 235 (324)
-|.|+.|...|- +-|-.|+.|+..+.+...|.+
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 82 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV 82 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence 588888887664 345678888888888877765
No 252
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=44.07 E-value=23 Score=27.17 Aligned_cols=54 Identities=4% Similarity=-0.248 Sum_probs=35.5
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCcccC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVAN 322 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~~~ 322 (324)
..-.|.-|...|.++ .. -.|++.||..|=.-.-+.-..||.|........++.|
T Consensus 28 ~~~~CpI~~~~m~dP-------V~-~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 28 DEFRDPLMDTLMTDP-------VR-LPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp TTTBCTTTCSBCSSE-------EE-ETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEEC
T ss_pred HhhCCcCccCcccCC-------eE-CCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceEC
Confidence 355899998777654 22 2499999999943333345789999875544444433
No 253
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.06 E-value=8.3 Score=23.89 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=18.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++..|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRSH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHS
T ss_pred CcCCCCCCCcCCChHHHHHHHHHh
Confidence 488888888888877777776655
No 254
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=44.05 E-value=11 Score=37.98 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=30.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCE 311 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~ 311 (324)
.+.|..|...|.+.. ..+|+|..|+...|..|-..+ ..|++=.
T Consensus 529 ~t~C~~C~~~l~gl~---~qg~~C~~C~~~vHk~C~~~v----~~C~~~~ 571 (587)
T 3ky9_A 529 TTSCKACQMLLRGTF---YQGYRCHRCRASAHKECLGRV----PPCGRHG 571 (587)
T ss_dssp CCBCTTTCSBCCSSS---CCEEEETTTCCEECSGGGGGS----CCC----
T ss_pred Ccccccccccccccc---cCCcCCCCCCCccchhhhhcC----CCCCCCC
Confidence 468999988775432 247999999999999998776 3676543
No 255
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=43.94 E-value=84 Score=23.57 Aligned_cols=51 Identities=6% Similarity=0.070 Sum_probs=35.5
Q ss_pred eEEEEEeCCCC-CCcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhC
Q 020564 91 EVLILYSALST-CDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTG 141 (324)
Q Consensus 91 eILil~gS~~t-~d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~Tg 141 (324)
+|+|+..+..+ ..-+.-..+...+++.+|....|-+..+..+.+++.+.+|
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHS
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhC
Confidence 46666543211 1122445788889999999999999877777777877777
No 256
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=43.33 E-value=6.5 Score=30.83 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=24.0
Q ss_pred eecCCccccCee-EcCCCCcccccCCCCCCCCCcee
Q 020564 193 SCHKEVKVGVGY-TCPRCKARVCELPTDCRICGLQL 227 (324)
Q Consensus 193 ~CH~~~~~~~Gy-~Cp~C~s~~C~lP~~C~~C~l~L 227 (324)
.|+.++...+|| .|+.|.+-|=.. ..||.|+..|
T Consensus 37 ~Cq~eL~~~g~~~hC~~C~~~f~~~-a~CPdC~q~L 71 (101)
T 2jne_A 37 QCQHVLDQDNGHARCRSCGEFIEMK-ALCPDCHQPL 71 (101)
T ss_dssp SSCSBEEEETTEEEETTTCCEEEEE-EECTTTCSBC
T ss_pred cCCCcceecCCEEECccccchhhcc-ccCcchhhHH
Confidence 477777554445 599999976544 5799998764
No 257
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.27 E-value=6.9 Score=22.79 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=20.3
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|+..|=..-++-.|...|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHHSS
T ss_pred CccCCCCCchhCCHHHHHHHHHHhc
Confidence 5999999999988877777876653
No 258
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=43.19 E-value=13 Score=19.89 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=15.6
Q ss_pred CCCCCCCCceecCchhHHhh
Q 020564 217 PTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLars 236 (324)
|-.|+.||..+....+|.+-
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTH 21 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHH
Confidence 45788899999888888653
No 259
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.16 E-value=6.2 Score=24.54 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=18.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRTH 35 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHH
T ss_pred CcCCCCCCcccCcHHHHHHHHHHc
Confidence 488888888888777777775544
No 260
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=43.06 E-value=8.2 Score=26.17 Aligned_cols=27 Identities=19% Similarity=0.627 Sum_probs=18.2
Q ss_pred eeEcCCCCcccc-----------cCCCCCCCCCceecC
Q 020564 203 GYTCPRCKARVC-----------ELPTDCRICGLQLVS 229 (324)
Q Consensus 203 Gy~Cp~C~s~~C-----------~lP~~C~~C~l~Lvs 229 (324)
.|.|+.|+..|- +-|-.|+.||..+..
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~ 51 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE 51 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCcccc
Confidence 788998887553 235577777776543
No 261
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.99 E-value=5.2 Score=29.89 Aligned_cols=25 Identities=28% Similarity=0.656 Sum_probs=20.7
Q ss_pred eeeCCCCCcccccccchhhhhc-CCC
Q 020564 282 YVACPKCKKHFCLECDIYIHES-LHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~-lh~ 306 (324)
.|+|+.|+..|=..=++..|.. .|.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCccccchhCCHHHHHHHHHHHcC
Confidence 4889999999988888888885 663
No 262
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=42.95 E-value=17 Score=27.93 Aligned_cols=34 Identities=21% Similarity=0.526 Sum_probs=28.4
Q ss_pred eeEcCCCCcccc------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|+..|- +-|-.|+.|+..+.....|.+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H 119 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDH 119 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHH
Confidence 799999998764 4577999999999999988753
No 263
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.85 E-value=6.5 Score=24.42 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=17.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEeCCcCCCccCCHHHHHHHHHHH
Confidence 488888888887777777775544
No 264
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=42.46 E-value=6.7 Score=21.21 Aligned_cols=24 Identities=21% Similarity=0.515 Sum_probs=19.7
Q ss_pred eeeCC--CCCcccccccchhhhhcCC
Q 020564 282 YVACP--KCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~--~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+ .|++.|-..=++-.|...|
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~H 27 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKIH 27 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence 38899 9999998888888887766
No 265
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.33 E-value=9.1 Score=23.71 Aligned_cols=24 Identities=25% Similarity=0.686 Sum_probs=19.7
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCChhhCCHHHHHHHHHHc
Confidence 588999999998888888886665
No 266
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=42.31 E-value=11 Score=26.88 Aligned_cols=25 Identities=28% Similarity=0.785 Sum_probs=19.8
Q ss_pred eEcCCCCcccccCCCCCCCCCceecCc
Q 020564 204 YTCPRCKARVCELPTDCRICGLQLVSS 230 (324)
Q Consensus 204 y~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 230 (324)
-.||.|+.. .|-..||.||....++
T Consensus 6 r~C~~Cg~Y--TLk~~CP~CG~~t~~a 30 (60)
T 2aus_D 6 RKCPKCGRY--TLKETCPVCGEKTKVA 30 (60)
T ss_dssp EECTTTCCE--ESSSBCTTTCSBCEES
T ss_pred eECCCCCCE--EccccCcCCCCccCCC
Confidence 479999876 4577899999987665
No 267
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.26 E-value=12 Score=22.59 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred CEECCCCCCccCCHHHHHHHHHhcC
Confidence 5899999999999988888987774
No 268
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=42.01 E-value=7.5 Score=26.69 Aligned_cols=30 Identities=23% Similarity=0.663 Sum_probs=23.2
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccch
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDI 298 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~ 298 (324)
...|-+|.+.+ . .||+|..|... +|.+|-.
T Consensus 6 ~~~Cd~C~~~i-g------~R~~C~~C~dyDLC~~C~~ 36 (52)
T 1tot_A 6 VYTCNECKHHV-E------TRWHCTVCEDYDLCINCYN 36 (52)
T ss_dssp CEEETTTTEEE-S------SEEEESSSSSCEECHHHHH
T ss_pred EEECCCCCCCC-c------ceEEcCCCCCchhHHHHHh
Confidence 45799999763 1 48999999765 8999954
No 269
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.63 E-value=13 Score=22.88 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=19.8
Q ss_pred eeeCCCCCcccccccchhhhhc-CC
Q 020564 282 YVACPKCKKHFCLECDIYIHES-LH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~-lh 305 (324)
.|+|+.|++.|=..-++-.|.. .|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H 36 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYH 36 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred CEECCccCchhCChHHHHHHhHhhc
Confidence 4889999999988888888876 65
No 270
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=41.55 E-value=11 Score=29.41 Aligned_cols=54 Identities=17% Similarity=0.405 Sum_probs=34.4
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHS 316 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~ 316 (324)
...|.-|+..|.++.... ..-.-..|++.||.+|=.-.-+.-..||.|......
T Consensus 7 ~~~C~IC~~~~~~~~~~~-~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNG-RLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp SCBCTTTCCBHHHHHHTT-CCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCcccChhhhCccccc-cCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 457889987775430000 012345799999999976555566789999865443
No 271
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=41.36 E-value=7.7 Score=22.18 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=20.5
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|=..-++-.|...|.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~ 31 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREVH 31 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred CeECCCCcchhCCHHHHHHHHHHHc
Confidence 5999999999988888888876653
No 272
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.18 E-value=6.8 Score=24.25 Aligned_cols=24 Identities=25% Similarity=0.578 Sum_probs=18.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeeCCCCChhhCCHHHHHHHHHHh
Confidence 488888888888877777775544
No 273
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.14 E-value=5.7 Score=23.05 Aligned_cols=24 Identities=21% Similarity=0.563 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..-++-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHc
Confidence 599999999998887777776554
No 274
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=41.12 E-value=19 Score=26.64 Aligned_cols=52 Identities=4% Similarity=-0.228 Sum_probs=35.0
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCCCCCCCCCCCcc
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIV 320 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~ 320 (324)
..-.|.-|+..|.++ . .-.|++.||..|=.-.-+.-..||.|........++
T Consensus 13 ~~~~CpI~~~~m~dP-------V-~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDP-------V-RLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLE 64 (85)
T ss_dssp TTTBCTTTCSBCSSE-------E-ECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCE
T ss_pred hheECcccCchhcCC-------e-ECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcc
Confidence 356899998777654 2 234999999999544334457899998654433333
No 275
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=41.04 E-value=21 Score=21.45 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=21.2
Q ss_pred eeEcCCCCcccccCCCCCCCCCcee
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQL 227 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~L 227 (324)
++.||+|-...=..-..|.+|+..+
T Consensus 6 ~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 6 MWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCC
T ss_pred cccCCcccccCCCCCCccCCcCCCC
Confidence 7899999988877778999998764
No 276
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.01 E-value=5.1 Score=23.27 Aligned_cols=24 Identities=29% Similarity=0.470 Sum_probs=19.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLLH 32 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHHh
Confidence 589999999998887777776655
No 277
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.86 E-value=11 Score=23.26 Aligned_cols=24 Identities=33% Similarity=0.595 Sum_probs=16.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERLH 35 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHHC
T ss_pred CeECCCCCCccCchHHHHHHHHhc
Confidence 477777777777776666665544
No 278
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=40.58 E-value=18 Score=31.00 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=27.0
Q ss_pred CCCCceEEEEEeCCCCCC-cccHH----H-HHHHHHhcCcEEEEEEccc
Q 020564 86 SYGHREVLILYSALSTCD-PGDIM----E-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 86 ~~~~reILil~gS~~t~d-~g~i~----~-ti~~akk~~IrV~vI~Lga 128 (324)
.|++.+||||.||+.-.+ ++... + +++.+++.+..|.++-|..
T Consensus 9 ~~~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~ 57 (204)
T 2amj_A 9 HHGSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADS 57 (204)
T ss_dssp ---CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccCCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 367889999999997432 23332 3 4566677799999999975
No 279
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.29 E-value=11 Score=23.30 Aligned_cols=25 Identities=24% Similarity=0.541 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGIHT 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTTTT
T ss_pred CeECCCCCcccCCHHHHHHHHHhhC
Confidence 5899999999999999999988774
No 280
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.11 E-value=12 Score=23.22 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.3
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRVHS 36 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred CcCCCCcCchhCCHHHHHHHHHHhC
Confidence 5999999999999999999988774
No 281
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=39.96 E-value=36 Score=27.83 Aligned_cols=40 Identities=13% Similarity=0.232 Sum_probs=29.1
Q ss_pred CCceEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccc
Q 020564 88 GHREVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 88 ~~reILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lga 128 (324)
..++|+|+++|... +...+-+ .++.+++.|+.|.++.+..
T Consensus 3 ~~~kv~IvY~S~~G-nT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 3 AETSIGVFYVSEYG-YSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CCCEEEEEECTTST-THHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEEECCCh-HHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 45689999998853 3334444 4667888899999999864
No 282
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=39.94 E-value=1.1e+02 Score=29.62 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=46.5
Q ss_pred EEEEEeCCCCCCcccHH-HHHHHHHhc--CcEEEEEEccchHHHHHHHHHhhCCeeEEeCCHHHHHHHH
Q 020564 92 VLILYSALSTCDPGDIM-ETIQKCKES--KIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELI 157 (324)
Q Consensus 92 ILil~gS~~t~d~g~i~-~ti~~akk~--~IrV~vI~Lgae~~iLk~ia~~TgG~Y~va~d~~hl~~lL 157 (324)
-|+|+||- |+|- +|++..+++ +.+|...+-+..+..|.+.+++.+=.|-+..|++..+++-
T Consensus 11 ~i~ILGST-----GSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~ 74 (406)
T 1q0q_A 11 QLTILGST-----GSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLK 74 (406)
T ss_dssp EEEEETTT-----SHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHH
T ss_pred eEEEEccC-----cHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHH
Confidence 45566654 5677 688888887 5666666666678999999999999999999988765443
No 283
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=39.60 E-value=31 Score=27.07 Aligned_cols=64 Identities=16% Similarity=0.263 Sum_probs=41.3
Q ss_pred eEEEE-EeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc----hHHHHHHHHHhhCCeeEEeCCH-HHHHHHHH
Q 020564 91 EVLIL-YSALSTCDPGDIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSYSVALDE-SHFKELIM 158 (324)
Q Consensus 91 eILil-~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga----e~~iLk~ia~~TgG~Y~va~d~-~hl~~lL~ 158 (324)
+++|+ +|+. .+...++++.++++||++.+|.+.. +...++++++.++-...+-.+. +.|-.++.
T Consensus 15 dv~iv~~Gs~----~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~~G~l~~~i~ 84 (118)
T 3ju3_A 15 DITFVTWGSQ----KGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQAAQMIK 84 (118)
T ss_dssp SEEEEEEGGG----HHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCCCCCHHHHHH
T ss_pred CEEEEEECcc----HHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCCCCcHHHHHH
Confidence 45555 4544 3566789999999999999999863 3456667777666554444442 44544443
No 284
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=39.41 E-value=2.2 Score=34.38 Aligned_cols=51 Identities=18% Similarity=0.299 Sum_probs=0.4
Q ss_pred CCccccccccccCCCC----------CCCceeeCCCCCcccccccchhhhhcCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGN----------KPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 312 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~----------~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~ 312 (324)
...|.-|...|..+.. .+.....-..|++.|+.+|=.---++-..||-|-.
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~ 108 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 108 (117)
T ss_dssp C------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCC
Confidence 4579999988864210 00111122479999999995544445578999964
No 285
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.11 E-value=16 Score=21.79 Aligned_cols=25 Identities=28% Similarity=0.654 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGGCC
T ss_pred CeECCCCCCCcCCHHHHHHHHHHhC
Confidence 5999999999998888888887774
No 286
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=39.05 E-value=33 Score=32.48 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=29.1
Q ss_pred ceEEEEEeCCCCCCcccHH---HHHHHHHhcCcEEEEEEccchH
Q 020564 90 REVLILYSALSTCDPGDIM---ETIQKCKESKIRCSVIGLSAEM 130 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~---~ti~~akk~~IrV~vI~Lgae~ 130 (324)
+-||+|+. +. .||++ -+++.|+.++|+|.+|-.+.++
T Consensus 95 ~GvL~ivk-NY---tGDvlNF~mAaE~a~~eGi~v~~VvV~DDv 134 (336)
T 2iu4_A 95 KGVFVIIK-NF---EADLKEFNEAIKEARTEGIDVRYIVSHDDI 134 (336)
T ss_dssp SCEEEEEE-SC---HHHHHHHHHHHHHHHHTTCCEEEEEECCBC
T ss_pred CCEEEEeC-Cc---HHHhhcHHHHHHHHHhCCCcEEEEEecCce
Confidence 45898888 43 35555 5899999999999999998653
No 287
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=39.00 E-value=1e+02 Score=27.94 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=47.5
Q ss_pred eEEEEEeCCC-CC-CcccHHHHHHHHHh----cCcEEEEEEccchH--HHHHHHHHhhCCeeEEe--CCHHHHHHHHHhc
Q 020564 91 EVLILYSALS-TC-DPGDIMETIQKCKE----SKIRCSVIGLSAEM--FICKHLCQDTGGSYSVA--LDESHFKELIMEH 160 (324)
Q Consensus 91 eILil~gS~~-t~-d~g~i~~ti~~akk----~~IrV~vI~Lgae~--~iLk~ia~~TgG~Y~va--~d~~hl~~lL~~~ 160 (324)
.+++++|... .. +...+.+++..+++ .++++.++|=|.+. ..++++++..|...... .+.+.+.++|...
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 331 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSV 331 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHC
Confidence 4666677665 21 33344577777777 68999999988776 78999998888443322 4677777777543
No 288
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.89 E-value=12 Score=23.01 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGTS
T ss_pred CEECCCCChhhCChHHHHHHHHhcC
Confidence 5999999999999999999988773
No 289
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.83 E-value=11 Score=22.70 Aligned_cols=25 Identities=24% Similarity=0.562 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|-..-++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGGTS
T ss_pred CeeCCCccchhCCHHHHHHHHHHhC
Confidence 5899999999999888888887763
No 290
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.55 E-value=12 Score=28.25 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=30.8
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchh-hhhc-----CCCCCC--CCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-IHES-----LHNCPG--CES 312 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f-ihe~-----lh~Cpg--C~~ 312 (324)
.-.|.-|+..|.++ ..-+.|++.||..|=.- +.+. -..||- |..
T Consensus 7 ~~~CPI~~~~~~dP-------V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~ 58 (94)
T 2yu4_A 7 GFTCPITKEEMKKP-------VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSH 58 (94)
T ss_dssp CCBCTTTCSBCSSE-------EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCC
T ss_pred EeECcCcCchhcCC-------EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcc
Confidence 45799999888654 34557999999999433 3222 358999 863
No 291
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=38.47 E-value=19 Score=27.31 Aligned_cols=39 Identities=38% Similarity=0.805 Sum_probs=28.0
Q ss_pred CCCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 261 SRSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 261 ~~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
....|.. |.+.-. ..|.|..|+..||.+ ==+..-|.|++
T Consensus 24 ~~~~C~~~~Ck~~~~-------l~f~C~~C~~~FC~~---HR~~e~H~C~~ 64 (86)
T 1wfe_A 24 KSYSCSFKGCTDVEL-------VAVICPYCEKNFCLR---HRHQSDHDCEK 64 (86)
T ss_dssp CCEECCSTTCCCEES-------SCEECTTTCCEECGG---GCSTGGGTCSS
T ss_pred CCCCCCCcCCCCCCc-------cceECCCCCcccccc---cCCccCCCCCC
Confidence 3457888 974421 258999999999986 22455699987
No 292
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=38.19 E-value=68 Score=26.21 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=33.0
Q ss_pred ceEEEEEeCCCCCCc-ccHH-HHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEEeCCHHHHHHHHHhcCCC
Q 020564 90 REVLILYSALSTCDP-GDIM-ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPP 163 (324)
Q Consensus 90 reILil~gS~~t~d~-g~i~-~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~va~d~~hl~~lL~~~~~p 163 (324)
++|+++++.....+. .+++ +....++... .|.+.+-.+....++++++..+..+....|.+.+.+.+.+...|
T Consensus 64 ~riivvf~~g~~s~r~k~~~~~~~~~~~~aD-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~~~~~~~~ 138 (163)
T 3mvn_A 64 QRILAVLEPRSNTMKMGVHKHELATSLQDAD-SVFIYQPPTIEWQVSEVLANLAQPAISADDVDELVMRIVQQAKP 138 (163)
T ss_dssp SCEEEEECCC---------CHHHHHHHTTCS-EEEEECC----CCHHHHHTTCCSCEEEESSHHHHHHHHHHHCCT
T ss_pred CcEEEEECCCCcchhhHHHHHHHHHHHhcCC-EEEEECCCCcccCHHHHHhhCCCCeEEECCHHHHHHHHHHhCCC
Confidence 568888863321111 2333 3334443221 33343321111135666665555566666776666666666644
No 293
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=38.16 E-value=23 Score=27.96 Aligned_cols=85 Identities=19% Similarity=0.269 Sum_probs=55.6
Q ss_pred CCCCCCCCCceecCchhHHhhh--cccCCC--CCCcccCccCCCCCCCCCCCccccccccccCCCC--------CCCcee
Q 020564 216 LPTDCRICGLQLVSSPHLARSY--HHLFPI--APFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGN--------KPGLYV 283 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLarsy--hhl~p~--~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~--------~~~~~~ 283 (324)
.+-.|+.|+..+.+...|.+-. +|.-.. ..+.. ..-.|..|.+.|..... .....|
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~ 91 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------YWEECPREGKSFKAKYKLVNHIRVHTGEKPF 91 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC------------CBTTCTTSSCCCSSHHHHHHHTHHHHCCCSE
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc------------cccCCCCcccccCCHHHHHHHHHhcCCCCcc
Confidence 4557888999999998888653 353211 11100 11368899888864320 012359
Q ss_pred eCCC--CCcccccccchhhhhcCC------CCCC--CCC
Q 020564 284 ACPK--CKKHFCLECDIYIHESLH------NCPG--CES 312 (324)
Q Consensus 284 ~C~~--C~~~fC~dCd~fihe~lh------~Cpg--C~~ 312 (324)
.|+. |+..|=..=++-.|...| .|+. |..
T Consensus 92 ~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k 130 (155)
T 2rpc_A 92 PCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130 (155)
T ss_dssp ECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCC
T ss_pred cCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCC
Confidence 9988 999998888888887665 6884 864
No 294
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=38.01 E-value=8.8 Score=28.73 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=30.7
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccch-hhh----hc---CCCCCC--CCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI-YIH----ES---LHNCPG--CESL 313 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~-fih----e~---lh~Cpg--C~~~ 313 (324)
...|.-|...++.+ ..+.-..|++.||.+|=. |+. |. --.||. |...
T Consensus 5 ~~~C~IC~~~~~~~-----~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVE-----QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGG-----GEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccc-----cceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 44699998666532 234556799999999943 222 22 137998 8765
No 295
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=37.83 E-value=16 Score=20.94 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=16.0
Q ss_pred CCCCCCCCceecCchhHHhh
Q 020564 217 PTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLars 236 (324)
|-.|+.||..+....+|.+-
T Consensus 2 p~~C~~C~k~F~~~~~L~~H 21 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKH 21 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHH
Confidence 45788999999998888753
No 296
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.82 E-value=12 Score=23.11 Aligned_cols=25 Identities=28% Similarity=0.688 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTTTS
T ss_pred CEECCccCcccCCHHHHHHHHHHhC
Confidence 5899999999999999999988774
No 297
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=37.74 E-value=12 Score=23.86 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=22.4
Q ss_pred eeeCCCCCcccccccchhhhhc-CCC
Q 020564 282 YVACPKCKKHFCLECDIYIHES-LHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~-lh~ 306 (324)
.|.|+.|++.|-..-++-.|.. .|.
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~ 32 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHL 32 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcC
Confidence 5999999999999999999988 774
No 298
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.65 E-value=18 Score=22.23 Aligned_cols=25 Identities=32% Similarity=0.620 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERIHT 36 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTTCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHHcC
Confidence 5999999999999888888877764
No 299
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=37.61 E-value=12 Score=29.09 Aligned_cols=29 Identities=34% Similarity=0.931 Sum_probs=22.1
Q ss_pred CCccccccc-cccCCCCCCCceeeCCCCCc-cccccc
Q 020564 262 RSTCFGCQQ-SLLSSGNKPGLYVACPKCKK-HFCLEC 296 (324)
Q Consensus 262 ~~~C~~C~~-~~~~~~~~~~~~~~C~~C~~-~fC~dC 296 (324)
...|-+|.+ ++. ..||+|..|.. .+|.+|
T Consensus 31 gv~Cd~C~~~pI~------G~RykC~~C~d~DLC~~C 61 (98)
T 2dip_A 31 GIPCNNCKQFPIE------GKCYKCTECIEYHLCQEC 61 (98)
T ss_dssp CCCCSSSCCSSCC------SCEEEESSSSSCEEEHHH
T ss_pred CCCCcCCCCCCcc------cCeEECCCCCCccHHHHH
Confidence 368999985 342 24899999955 589999
No 300
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=37.50 E-value=18 Score=28.66 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=18.9
Q ss_pred eeEcCCCCcccc--cCCC-CCCCCCce
Q 020564 203 GYTCPRCKARVC--ELPT-DCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C--~lP~-~C~~C~l~ 226 (324)
-|.|..|+..|= +.+. .||.||-.
T Consensus 73 ~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 73 ELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp EEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred eEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 788999988764 4566 89999865
No 301
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.29 E-value=11 Score=23.23 Aligned_cols=25 Identities=24% Similarity=0.643 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CCCCCCCCcccCCHHHHHHHHhHhC
Confidence 5999999999999999988987774
No 302
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.26 E-value=13 Score=22.91 Aligned_cols=25 Identities=24% Similarity=0.677 Sum_probs=22.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHTSC
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999987774
No 303
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.25 E-value=19 Score=25.78 Aligned_cols=51 Identities=18% Similarity=0.301 Sum_probs=37.3
Q ss_pred CCccccccccccCCC--------CCCCceeeCCCCCcccccccchhhhhc--------CCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIHES--------LHNCPGCES 312 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCd~fihe~--------lh~CpgC~~ 312 (324)
.-.|.-|.+.|.... -.....|.|+.|+..|=..=++-.|.. ...|+.|..
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~ 73 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK 73 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCC
T ss_pred CeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccc
Confidence 447999999887642 012346999999999988888877753 457888864
No 304
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.09 E-value=11 Score=23.28 Aligned_cols=25 Identities=24% Similarity=0.607 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRIHT 36 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTTTS
T ss_pred CccCCCCCCccCChHHHHHHHHHhC
Confidence 5999999999999999999987763
No 305
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=37.01 E-value=13 Score=26.69 Aligned_cols=41 Identities=20% Similarity=0.502 Sum_probs=29.0
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
..|.-|...+.++ .+ -.|++. ||.+|-.- +..||-|-....
T Consensus 25 ~~C~iC~~~~~~~------~~--~pCgH~~~C~~C~~~----~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMDRNIAI------VF--VPCGHLVTCKQCAEA----VDKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSSSBCCE------EE--ETTCCBCCCHHHHTT----CSBCTTTCCBCS
T ss_pred CCCCCCCCCCCCE------EE--cCCCChhHHHHhhhc----CccCCCcCcCcc
Confidence 4799998665432 22 269999 99999543 389999976443
No 306
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=36.89 E-value=14 Score=25.71 Aligned_cols=48 Identities=19% Similarity=0.375 Sum_probs=34.3
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
...|.-|...+.+ ..+.---|++. ||.+|..-+-+.-..||.|-....
T Consensus 8 ~~~C~IC~~~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 8 IEPCVICQGRPKN------GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GSCCTTTSSSCSC------EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred cCCCCcCCCCCCC------EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 4579999855432 12322258998 899999988887788999976543
No 307
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=36.89 E-value=13 Score=28.00 Aligned_cols=36 Identities=25% Similarity=0.541 Sum_probs=27.0
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE 302 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe 302 (324)
...|..|...+..+ .+..|..|+..||.+|..-+|.
T Consensus 3 e~~C~~C~~~~~~~-----av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 3 KVLCQFCDQDPAQD-----AVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCBCTTCCSSSCCB-----CCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCcCCCCCCCCC-----ceEECCcCChHHhHHHCHHHhc
Confidence 45799998542211 2457999999999999998887
No 308
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=36.85 E-value=51 Score=25.83 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=38.5
Q ss_pred EEEEEeCCCCCCcccHHHHHHHHHh----cCcEEEEEEccchHHHHHHHHHhhCCee-EEeCCHHHHHHHHHh
Q 020564 92 VLILYSALSTCDPGDIMETIQKCKE----SKIRCSVIGLSAEMFICKHLCQDTGGSY-SVALDESHFKELIME 159 (324)
Q Consensus 92 ILil~gS~~t~d~g~i~~ti~~akk----~~IrV~vI~Lgae~~iLk~ia~~TgG~Y-~va~d~~hl~~lL~~ 159 (324)
+++++|.... ..++...++.+++ .++++.++|=+.+..-+++.++..|-.- +-..+.+.+.++|..
T Consensus 4 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~ 74 (166)
T 3qhp_A 4 KIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGFVNSNELLEILKT 74 (166)
T ss_dssp EEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEECCCCCHHHHHHHHTT
T ss_pred EEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEEeecCHHHHHHHHHh
Confidence 4555565533 2344444444433 3788888888777777888888777422 222334556666644
No 309
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.69 E-value=13 Score=22.95 Aligned_cols=25 Identities=24% Similarity=0.582 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRVHT 36 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999999987774
No 310
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=36.62 E-value=12 Score=27.14 Aligned_cols=27 Identities=26% Similarity=0.717 Sum_probs=20.7
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCch
Q 020564 205 TCPRCKARVC-----ELPTDCRICGLQLVSSP 231 (324)
Q Consensus 205 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~~ 231 (324)
.||.|..+.- ..++.|..||.+|.-++
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~PT 40 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAEPT 40 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEECC
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEeecC
Confidence 5899988655 45689999999987543
No 311
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=36.59 E-value=21 Score=24.30 Aligned_cols=33 Identities=39% Similarity=0.881 Sum_probs=25.3
Q ss_pred eeEcC--CCCcccc--------------cCCCCCCCCCceecCchhHHh
Q 020564 203 GYTCP--RCKARVC--------------ELPTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 203 Gy~Cp--~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLar 235 (324)
-|.|+ .|+..|- +-|-.|+.||..+.....|.+
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 67 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHH
Confidence 68887 5887664 346689999999988888865
No 312
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.53 E-value=12 Score=22.90 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHHCC
T ss_pred CeECCCCCchhCCHHHHHHHhHhcC
Confidence 5999999999999888888877663
No 313
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.27 E-value=12 Score=23.03 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGS
T ss_pred CeECCCCCcccCchHHHHHHHhHhc
Confidence 5999999999998888888887764
No 314
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.21 E-value=9.8 Score=23.28 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=17.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++..|...|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 488888888887777777775544
No 315
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.00 E-value=10 Score=23.09 Aligned_cols=25 Identities=24% Similarity=0.651 Sum_probs=21.8
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|=..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRTHT 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHTT
T ss_pred CeECCCCCcccCCHhHHHHHHHHhC
Confidence 5999999999999999988887764
No 316
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.65 E-value=5.7 Score=24.84 Aligned_cols=23 Identities=26% Similarity=0.401 Sum_probs=15.1
Q ss_pred eeeCCCCCcccccccchhhhhcC
Q 020564 282 YVACPKCKKHFCLECDIYIHESL 304 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~l 304 (324)
.|+|+.|++.|=..=++-.|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHH
Confidence 46777777777766666666443
No 317
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.10 E-value=11 Score=22.26 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=20.0
Q ss_pred eeeCCCCCcccccccchhhh-hcCC
Q 020564 282 YVACPKCKKHFCLECDIYIH-ESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fih-e~lh 305 (324)
.|.|+.|+..|-..-+.-.| ...|
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H 33 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKH 33 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHT
T ss_pred CeECCCCCcccCCHHHHHHHHHHHc
Confidence 59999999999888887778 6655
No 318
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.06 E-value=15 Score=22.73 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=22.0
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSVHS 36 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred ccCCCCCCcccCcHHHHHHHHHhcC
Confidence 5899999999999999999987774
No 319
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.05 E-value=9.1 Score=23.77 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=17.3
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWITH 35 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTHH
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 477888888887777777775543
No 320
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=34.99 E-value=15 Score=20.36 Aligned_cols=24 Identities=25% Similarity=0.528 Sum_probs=20.0
Q ss_pred eeCC--CCCcccccccchhhhhcCCC
Q 020564 283 VACP--KCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 283 ~~C~--~C~~~fC~dCd~fihe~lh~ 306 (324)
|.|+ .|++.|=..-++-.|...|.
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred cCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 7897 89999988888888887774
No 321
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.85 E-value=93 Score=26.63 Aligned_cols=78 Identities=14% Similarity=0.068 Sum_probs=51.8
Q ss_pred CCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhh--CC--ee-EEeCCHHHHHHHHH
Q 020564 86 SYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDT--GG--SY-SVALDESHFKELIM 158 (324)
Q Consensus 86 ~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~T--gG--~Y-~va~d~~hl~~lL~ 158 (324)
++.+.+|-|++||.+ |-.-..++++.|++.||..++--.++. ..-+.++++.- .| .+ -++--+.||--.+-
T Consensus 9 ~~~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA 86 (173)
T 4grd_A 9 THSAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLA 86 (173)
T ss_dssp CCSSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHH
T ss_pred CCCCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhhe
Confidence 345668999999764 333334799999999999887666664 23333443332 22 33 45667889998888
Q ss_pred hcCCCCc
Q 020564 159 EHAPPPP 165 (324)
Q Consensus 159 ~~~~pp~ 165 (324)
..++-|.
T Consensus 87 ~~t~~PV 93 (173)
T 4grd_A 87 AKTTVPV 93 (173)
T ss_dssp HHCCSCE
T ss_pred ecCCCCE
Confidence 8876654
No 322
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.62 E-value=13 Score=22.62 Aligned_cols=25 Identities=28% Similarity=0.588 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKTHA 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGGGC
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999998888888887764
No 323
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=34.51 E-value=98 Score=23.55 Aligned_cols=51 Identities=20% Similarity=0.105 Sum_probs=35.6
Q ss_pred CCceEEEEEeCCCCCCcccHH---HHHHHHHh-cCcEEEEEEccchHHHHHHHHHhhC
Q 020564 88 GHREVLILYSALSTCDPGDIM---ETIQKCKE-SKIRCSVIGLSAEMFICKHLCQDTG 141 (324)
Q Consensus 88 ~~reILil~gS~~t~d~g~i~---~ti~~akk-~~IrV~vI~Lgae~~iLk~ia~~Tg 141 (324)
+.+.|++=++.....|...+. ...+.+++ .|+++.++++..++. ++-+.||
T Consensus 47 ~~~~vvlDls~v~~iDSsGl~~L~~~~~~~~~~~g~~l~l~~~~~~v~---~~l~~~g 101 (121)
T 3t6o_A 47 QPRKVLIDLEGVEFFGSSFIELLVRGWKRIKEDQQGVFALCSVSPYCV---EVLQVTH 101 (121)
T ss_dssp SSCEEEEECTTCCEECHHHHHHHHHHHHHHTTSTTCEEEEESCCHHHH---HHHTTCS
T ss_pred CCCeEEEECCCCCEEcHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH---HHHHHhC
Confidence 345566667766666765443 67888999 999999999976653 4555555
No 324
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.50 E-value=12 Score=22.84 Aligned_cols=25 Identities=24% Similarity=0.455 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|+..|-..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKTHS 36 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTTSS
T ss_pred CeeCCCCCCccCCHHHHHHHHHHcC
Confidence 5899999999999988888887763
No 325
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.44 E-value=16 Score=22.42 Aligned_cols=25 Identities=24% Similarity=0.596 Sum_probs=22.0
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCCCCCccCCHHHHHHHHHHcC
Confidence 5999999999999999999987774
No 326
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.34 E-value=15 Score=22.54 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=16.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|-..-++-.|...|
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~H 33 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRSH 33 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHc
Confidence 477778887777777776665443
No 327
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.10 E-value=29 Score=24.34 Aligned_cols=35 Identities=26% Similarity=0.631 Sum_probs=25.2
Q ss_pred CCccccccccccCCCCCCCceeeCCC--CCcccccccch
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPK--CKKHFCLECDI 298 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~--C~~~fC~dCd~ 298 (324)
...|..|...+...++ =..-.|.. |+..||.-|-.
T Consensus 6 ~k~CP~C~~~Iek~~G--CnhmtC~~~~C~~~FCw~C~~ 42 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGG--CNHMVCRNQNCKAEFCWVCLG 42 (60)
T ss_dssp CCCCTTTCCCCSSCCS--CCSSSCCSSGGGSCCSSSSCS
T ss_pred ceECcCCCCeeEeCCC--CCcEEECCCCcCCEEeeCcCC
Confidence 4579999988765431 12346988 99999999964
No 328
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=34.10 E-value=12 Score=22.49 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=20.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|-..=++-.|...|.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~H~ 35 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRSCS 35 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTT
T ss_pred CeECCCCCcccCCHHHHHHHhhhcC
Confidence 5999999999988888888876663
No 329
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.08 E-value=13 Score=22.86 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=21.8
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred CeECCCCCcccCChhHHHHHhHhcC
Confidence 4899999999999999999987774
No 330
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=34.00 E-value=31 Score=25.52 Aligned_cols=38 Identities=32% Similarity=0.600 Sum_probs=27.6
Q ss_pred CCcccc--ccccccCCCCCCCceeeCCCCCcccccccchhhhhcCCCCCC
Q 020564 262 RSTCFG--CQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPG 309 (324)
Q Consensus 262 ~~~C~~--C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~lh~Cpg 309 (324)
..+|.. |.+.= -..|.|..|+..||.+ =-+..-|+||+
T Consensus 14 g~~Cs~~~C~~~d-------flpf~C~~C~~~FC~~---HR~~e~H~C~~ 53 (75)
T 1wys_A 14 GQHCQVQHCRQRD-------FLPFVCDGCSGIFCLE---HRSKDSHGCSE 53 (75)
T ss_dssp CCCCSCTTTCCCS-------CCCEECTTTCCEECST---TCSSGGGTCCC
T ss_pred CCCcCcccCCCcc-------ceeeECcccCcCcCcc---cCCccccCCCC
Confidence 457888 97431 1359999999999986 33456799987
No 331
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.89 E-value=16 Score=22.48 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTTTS
T ss_pred CeECCcCCcccCCHHHHHHHHHHhC
Confidence 5999999999999999999988774
No 332
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=33.86 E-value=25 Score=27.78 Aligned_cols=27 Identities=22% Similarity=0.454 Sum_probs=19.5
Q ss_pred ceeeCCCCCcccccccchhhhhcCC-CCCCCCCC
Q 020564 281 LYVACPKCKKHFCLECDIYIHESLH-NCPGCESL 313 (324)
Q Consensus 281 ~~~~C~~C~~~fC~dCd~fihe~lh-~CpgC~~~ 313 (324)
..|+|..|++.|=.+ +-.- .||.|.+.
T Consensus 72 ~~~~C~~CG~~~e~~------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC------CCCCCcCccccCC
Confidence 468899998887663 3345 69999765
No 333
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.69 E-value=18 Score=22.22 Aligned_cols=25 Identities=24% Similarity=0.568 Sum_probs=21.5
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred CeECCcCChhhCCHHHHHHHHHHhC
Confidence 5899999999999888888987774
No 334
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=33.66 E-value=15 Score=20.47 Aligned_cols=25 Identities=28% Similarity=0.557 Sum_probs=20.1
Q ss_pred eeeCC--CCCcccccccchhhhhcCCC
Q 020564 282 YVACP--KCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~--~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+ .|++.|=..=++-.|...|.
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 29 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ 29 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence 38898 89999988888888877663
No 335
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.64 E-value=31 Score=23.96 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=13.4
Q ss_pred CCCCCCCceecCchhHHhh
Q 020564 218 TDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 218 ~~C~~C~l~Lvs~~hLars 236 (324)
-.|+.|+..+....+|.+-
T Consensus 16 ~~C~~C~~~f~~~~~l~~H 34 (86)
T 1x6h_A 16 YACSHCDKTFRQKQLLDMH 34 (86)
T ss_dssp EECSSSSCEESSHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHH
Confidence 3456677888888888764
No 336
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.60 E-value=14 Score=22.83 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.6
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..=++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRVHT 36 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGGGT
T ss_pred CCCCCCCCcccCCHHHHHHHHHhcC
Confidence 5899999999999989888887763
No 337
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=33.57 E-value=21 Score=28.44 Aligned_cols=34 Identities=21% Similarity=0.534 Sum_probs=29.1
Q ss_pred eeEcCCCCcccc--------------cCCCCCCCCCceecCchhHHhh
Q 020564 203 GYTCPRCKARVC--------------ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 203 Gy~Cp~C~s~~C--------------~lP~~C~~C~l~Lvs~~hLars 236 (324)
-|.|+.|+..|- +-|-.|+.||..+...-.|.+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H 97 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH 97 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred CeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHH
Confidence 699999998776 3578999999999999999764
No 338
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=33.32 E-value=22 Score=26.75 Aligned_cols=77 Identities=22% Similarity=0.514 Sum_probs=50.6
Q ss_pred CCCCC--CCCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCccccccccccCCC--------CCCCceeeC
Q 020564 217 PTDCR--ICGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSG--------NKPGLYVAC 285 (324)
Q Consensus 217 P~~C~--~C~l~Lvs~~hLarsyh-hl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~--------~~~~~~~~C 285 (324)
|-.|+ .|+..+.+...|.+-.. | ... .-.|..|.+.|.... -.....|.|
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~-----------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C 65 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHTH--GPR-----------------VHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGGG--SCC-----------------CEECTTTCCEESSHHHHHHHGGGTSCCCCEEC
T ss_pred cccCCCCCCcCccCCHHHHHHHHHHc--CCC-----------------CeECCCCCchhCCHHHHHHHHHHcCCCCCeeC
Confidence 34687 89999999988876432 2 111 235888888886531 012235899
Q ss_pred CC--CCcccccccchhhhhc------CCCCC--CCCC
Q 020564 286 PK--CKKHFCLECDIYIHES------LHNCP--GCES 312 (324)
Q Consensus 286 ~~--C~~~fC~dCd~fihe~------lh~Cp--gC~~ 312 (324)
+. |+..|=..=++-.|.. ...|| +|..
T Consensus 66 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 102 (124)
T 1ubd_C 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102 (124)
T ss_dssp CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCC
T ss_pred CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCC
Confidence 74 9998887777777654 35786 5864
No 339
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=33.18 E-value=8.1 Score=31.62 Aligned_cols=44 Identities=23% Similarity=0.610 Sum_probs=30.7
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh-cCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE-SLHNCPGCES 312 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe-~lh~CpgC~~ 312 (324)
..-.|.-|+..|.++ .+. .|++.||..|=.-.-+ .-..||-|..
T Consensus 30 ~~~~C~IC~~~~~~p-------v~~-~CgH~FC~~Ci~~~~~~~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLRRP-------FQA-QCGHRYCSFCLASILSSGPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCSSE-------EEC-TTSCEEEHHHHHHHGGGSCEECHHHHH
T ss_pred cCcCCCCCChhhcCc-------EEC-CCCCccCHHHHHHHHhcCCCCCCCCCC
Confidence 345799999777543 343 7999999999544333 3348999964
No 340
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=33.15 E-value=39 Score=25.66 Aligned_cols=52 Identities=8% Similarity=-0.282 Sum_probs=34.4
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCC-cccccccchhhhhcCCCCCCCCCCCCCCCcc
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCK-KHFCLECDIYIHESLHNCPGCESLRHSNPIV 320 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~-~~fC~dCd~fihe~lh~CpgC~~~~~~~~~~ 320 (324)
..-.|.-|+..|.++. .-.|+ +.||..|=.-.-+.-..||.|........++
T Consensus 21 ~~~~CpI~~~~m~dPV--------~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~ 73 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPV--------VLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIR 73 (98)
T ss_dssp TTTBCTTTCSBCSSEE--------ECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSE
T ss_pred HhcCCcCccccccCCe--------ECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhce
Confidence 3558999987776542 23578 9999999443333457899998754443333
No 341
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.03 E-value=21 Score=25.61 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=35.5
Q ss_pred CCCCCCceecCchhHHhhh--cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCccccccc
Q 020564 219 DCRICGLQLVSSPHLARSY--HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLEC 296 (324)
Q Consensus 219 ~C~~C~l~Lvs~~hLarsy--hhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dC 296 (324)
.|+.|+..+....+|.+-. ||.- + ....++.|. .|.|+.|++.|=..-
T Consensus 27 ~C~~C~k~f~~~~~L~~H~~~~H~~------~------------~~~~~~~c~------------~~~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 27 PKKSCDRTFSTMHELVTHVTMEHVG------G------------PEQNNHVCY------------WEECPREGKSFKAKY 76 (95)
T ss_dssp SCCCCCCCCSSHHHHHHHHHHTTTC------C------------TTCSCCCCC------------CTTCSSTTCCCSSHH
T ss_pred cccccccccCCHHHHHHHHHHhccC------C------------CCCCcccee------------ccCCCCCCcccCCHH
Confidence 5889999999999998653 3431 0 011223332 267888888877776
Q ss_pred chhhhhcCC
Q 020564 297 DIYIHESLH 305 (324)
Q Consensus 297 d~fihe~lh 305 (324)
++-.|...|
T Consensus 77 ~L~~H~~~H 85 (95)
T 2ej4_A 77 KLVNHIRVH 85 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 766665444
No 342
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.98 E-value=23 Score=21.76 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=17.0
Q ss_pred eeeCCCCCcccccccchhhhhcC
Q 020564 282 YVACPKCKKHFCLECDIYIHESL 304 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~l 304 (324)
.|.|+.|++.|=..=++-.|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CEEccccCcccCCHHHHHHHHHH
Confidence 48888888888777777766543
No 343
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=32.90 E-value=15 Score=22.07 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|=..-++..|...|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGGC
T ss_pred CccCCCcChhhCCHHHHHHHHHhcC
Confidence 5999999999998888888877664
No 344
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=32.89 E-value=1.1e+02 Score=23.61 Aligned_cols=41 Identities=5% Similarity=-0.017 Sum_probs=29.8
Q ss_pred ceEEEEEeCCCCCCcc---cHHHHHHHHHhcCcEEEEEEccchH
Q 020564 90 REVLILYSALSTCDPG---DIMETIQKCKESKIRCSVIGLSAEM 130 (324)
Q Consensus 90 reILil~gS~~t~d~g---~i~~ti~~akk~~IrV~vI~Lgae~ 130 (324)
+.||+=++.....|.. -+.++.+.+++.|+++.++++..++
T Consensus 49 ~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 92 (130)
T 2kln_A 49 EWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDL 92 (130)
T ss_dssp EEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCSSHH
T ss_pred eEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 4444445555555654 4457899999999999999998765
No 345
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=32.86 E-value=16 Score=30.47 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=5.4
Q ss_pred cccccccccc
Q 020564 264 TCFGCQQSLL 273 (324)
Q Consensus 264 ~C~~C~~~~~ 273 (324)
.|.+|...|.
T Consensus 134 ~C~~Cg~~~~ 143 (165)
T 2lcq_A 134 VCIGCGRKFS 143 (165)
T ss_dssp EESSSCCEES
T ss_pred ECCCCCCccc
Confidence 4555555553
No 346
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.71 E-value=21 Score=21.89 Aligned_cols=23 Identities=22% Similarity=0.486 Sum_probs=17.1
Q ss_pred eeeCCCCCcccccccchhhhhcC
Q 020564 282 YVACPKCKKHFCLECDIYIHESL 304 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~l 304 (324)
.|.|+.|++.|=..-++-.|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHHHh
Confidence 48888888888877777777543
No 347
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=32.67 E-value=20 Score=26.55 Aligned_cols=42 Identities=24% Similarity=0.429 Sum_probs=25.8
Q ss_pred ccccccccccCCC--------CCCCceeeCCCCCcccccccchhhh-hcCC
Q 020564 264 TCFGCQQSLLSSG--------NKPGLYVACPKCKKHFCLECDIYIH-ESLH 305 (324)
Q Consensus 264 ~C~~C~~~~~~~~--------~~~~~~~~C~~C~~~fC~dCd~fih-e~lh 305 (324)
.|.-|.+.|.... -.....|.|+.|++.|=..=++-.| ...|
T Consensus 30 ~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H 80 (85)
T 2lv2_A 30 LCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH 80 (85)
T ss_dssp ECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred ECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence 5777777776532 0122357888888877776666666 3444
No 348
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=32.43 E-value=82 Score=27.90 Aligned_cols=54 Identities=19% Similarity=0.165 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch
Q 020564 69 SLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 69 sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae 129 (324)
+..+.++.+..++++. +.||++.+... .-..+.+.+..|++.||.|.++..+.+
T Consensus 7 ~~e~Ii~r~~e~I~~A----~~el~lsi~~e---~l~~l~~~L~~A~~rGV~V~liv~~~~ 60 (233)
T 2f5t_X 7 SFDEAIEMFRESLYSA----KNEVIVVTPSE---FFETIREDLIKTLERGVTVSLYIDKIP 60 (233)
T ss_dssp CHHHHHHHHHHHHHTC----SSEEEEEECGG---GHHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHHh----hhEEEEEeCHH---HHHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 4667888888888876 67888855422 123455789999999999999999764
No 349
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.42 E-value=18 Score=22.20 Aligned_cols=25 Identities=24% Similarity=0.675 Sum_probs=21.8
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKIHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTTTT
T ss_pred CeECCCCCchhCCHHHHHHHHHHcC
Confidence 5999999999999999998987763
No 350
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.41 E-value=23 Score=21.68 Aligned_cols=24 Identities=25% Similarity=0.588 Sum_probs=17.5
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVIH 35 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHHHHc
Confidence 488888888888777777775443
No 351
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.17 E-value=12 Score=23.18 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=19.1
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRIH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CEECCcCCchhCCHHHHHHHHHHh
Confidence 588999999888888887776555
No 352
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.15 E-value=26 Score=21.45 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=17.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRVH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHHH
T ss_pred CeECCcCCchhCCHHHHHHHHHhc
Confidence 478888888887777776665443
No 353
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.08 E-value=24 Score=21.69 Aligned_cols=24 Identities=25% Similarity=0.535 Sum_probs=17.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRVH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeECcccCchhCCHHHHHHHHHHH
Confidence 488888888888777776665443
No 354
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=32.07 E-value=21 Score=24.22 Aligned_cols=26 Identities=31% Similarity=0.939 Sum_probs=18.5
Q ss_pred eeEcCCCCccccc-----CC-CCCCCCCceec
Q 020564 203 GYTCPRCKARVCE-----LP-TDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s~~C~-----lP-~~C~~C~l~Lv 228 (324)
-|.|=+|+..|-+ || ..||.||-..+
T Consensus 3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyrii 34 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYKII 34 (48)
T ss_dssp --CCCCTTTTCCCCCSCCCSSSCCTTTCCSCE
T ss_pred EEEeeccCCCccHHHHhhCCCcccCccCcEEE
Confidence 4889999988764 56 58999997543
No 355
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=32.07 E-value=65 Score=24.04 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCC
Q 020564 107 IMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 142 (324)
Q Consensus 107 i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG 142 (324)
=..+...|++.+|....|-+..+....+++.+.++|
T Consensus 29 C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g 64 (99)
T 3qmx_A 29 CMRALALLKRKGVEFQEYCIDGDNEAREAMAARANG 64 (99)
T ss_dssp HHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCC
Confidence 346778889999999999998777777778888744
No 356
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.04 E-value=13 Score=22.86 Aligned_cols=25 Identities=24% Similarity=0.537 Sum_probs=21.7
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred CeECCCCCcccCCHHHHHHHHHHcC
Confidence 5899999999999999988887764
No 357
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=32.03 E-value=1.2e+02 Score=30.00 Aligned_cols=60 Identities=13% Similarity=0.199 Sum_probs=47.3
Q ss_pred EEEEeCCCCCCcccHH-HHHHHHHh-----cCcEEEEEEccchHHHHHHHHHhhCCeeEEeCCHHHHHHHH
Q 020564 93 LILYSALSTCDPGDIM-ETIQKCKE-----SKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELI 157 (324)
Q Consensus 93 Lil~gS~~t~d~g~i~-~ti~~akk-----~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~va~d~~hl~~lL 157 (324)
|+|+||- |+|- +|++..++ ++.+|...+-+..+..|.+.+++.+=.|-+..|++...++-
T Consensus 80 I~ILGST-----GSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~ 145 (488)
T 3au8_A 80 VAIFGST-----GSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELK 145 (488)
T ss_dssp EEEETTT-----SHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHH
T ss_pred EEEEccC-----cHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHH
Confidence 5666755 5677 68888888 57777777777789999999999999999988987765543
No 358
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.87 E-value=16 Score=22.09 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRTHT 36 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTTTC
T ss_pred CeECCCCCCccCCHHHHHHHhhhcC
Confidence 5899999999999888888887763
No 359
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.84 E-value=23 Score=21.69 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=17.6
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEEccccChhhCCHHHHHHHHHHh
Confidence 488888888888777777775543
No 360
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=31.44 E-value=1.1e+02 Score=27.02 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=47.8
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEE--eCCHHHHHHHHHhcC
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSV--ALDESHFKELIMEHA 161 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~v--a~d~~hl~~lL~~~~ 161 (324)
+.+++++|... ...++...++.+++.++++.++|=|.+...++++++..|+.... ..+...+.++|....
T Consensus 162 ~~~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 162 EDFLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CSCEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred CCEEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence 34677777664 24467777777777799999999888888888888887643321 245556677775543
No 361
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.27 E-value=2.8e+02 Score=26.52 Aligned_cols=89 Identities=17% Similarity=0.143 Sum_probs=55.8
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccchH----HHHHHHHHhhC--C-eeEEeCCHHHHHHHHHhcCC
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEM----FICKHLCQDTG--G-SYSVALDESHFKELIMEHAP 162 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~----~iLk~ia~~Tg--G-~Y~va~d~~hl~~lL~~~~~ 162 (324)
++|+|+.+ +......++.+++.|+.|-.++..... .-++++.+..+ + ......|..++++++.+.-
T Consensus 313 krv~i~~~------~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~- 385 (458)
T 1mio_B 313 KKVALLGD------PDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEG- 385 (458)
T ss_dssp CEEEEEEC------HHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSC-
T ss_pred CEEEEEcC------chHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcC-
Confidence 45666543 334456788888999999988886532 34555555554 2 3444468888888887663
Q ss_pred CCccc--------hhhhhhceeeecCCCCCC
Q 020564 163 PPPAI--------AEFAIANLIKMGFPQRAG 185 (324)
Q Consensus 163 pp~~~--------~~~~~~~Li~mGfP~~~~ 185 (324)
|+-.- +......++++|||....
T Consensus 386 pDl~ig~~~~~~~a~k~gip~~~~~fPi~dr 416 (458)
T 1mio_B 386 VDLLISNTYGKFIAREENIPFVRFGFPIMDR 416 (458)
T ss_dssp CSEEEESGGGHHHHHHHTCCEEECSSCCCSC
T ss_pred CCEEEeCcchHHHHHHcCCCEEEeeCCceec
Confidence 33221 112345799999997643
No 362
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.25 E-value=20 Score=25.84 Aligned_cols=21 Identities=43% Similarity=1.103 Sum_probs=16.5
Q ss_pred eecCCccccCeeEcCCCCccccc
Q 020564 193 SCHKEVKVGVGYTCPRCKARVCE 215 (324)
Q Consensus 193 ~CH~~~~~~~Gy~Cp~C~s~~C~ 215 (324)
.|-.++... ||.| +|+-.||.
T Consensus 20 ~C~kkvgl~-~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 20 SCNKKVGVM-GFKC-KCGSTFCG 40 (64)
T ss_dssp TTCCCCTTS-CEEC-TTSCEECS
T ss_pred hhCCccccc-CeEe-ecCCEecc
Confidence 466666667 9999 99999996
No 363
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=30.92 E-value=48 Score=29.21 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 69 SLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 69 sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+..|...+...+.... ...++|+|++||.+. +...+-+.+....+.++.+.++.+..
T Consensus 21 ~~~~av~~~~~l~~~~~-~~~~kv~IlYgS~tG-nte~~A~~La~~l~~g~~v~v~~l~~ 78 (219)
T 3hr4_A 21 VLVKAVLFACMLMRKTM-ASRVRVTILFATETG-KSEALAWDLGALFSCAFNPKVVCMDK 78 (219)
T ss_dssp HHHHHHHHHHHHHHHHH-HTSCEEEEEEECSSS-HHHHHHHHHHHHHTTTSEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHHH-hcCCcEEEEEECCch-HHHHHHHHHHHHHHcCCCeEEEEccc
Confidence 56777777777666543 234579999998853 33334433322235788999988863
No 364
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.89 E-value=14 Score=22.66 Aligned_cols=25 Identities=24% Similarity=0.654 Sum_probs=21.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAIHT 36 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTTSC
T ss_pred CeECCCCChhhCCHHHHHHHHHHhC
Confidence 5899999999999999988987774
No 365
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=30.76 E-value=59 Score=28.34 Aligned_cols=39 Identities=21% Similarity=0.323 Sum_probs=28.6
Q ss_pred ceEEEEEeCCCCCC-cccHH-HHHHHHHhcCcEEEEEEccc
Q 020564 90 REVLILYSALSTCD-PGDIM-ETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 90 reILil~gS~~t~d-~g~i~-~ti~~akk~~IrV~vI~Lga 128 (324)
.+||||.||+.... ...+. .+++.+++.|..|.++-|..
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~ 42 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYA 42 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhh
Confidence 47999999997421 11333 35788888899999999975
No 366
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.57 E-value=14 Score=22.64 Aligned_cols=25 Identities=24% Similarity=0.642 Sum_probs=21.4
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|+..|-..-++..|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred CcCCCCCCchhCCHHHHHHHHHHhC
Confidence 4899999999999989888877664
No 367
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.45 E-value=23 Score=21.06 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=16.1
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 020564 216 LPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars 236 (324)
-|-.|+.|+..+....+|.+-
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H 29 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQH 29 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHH
Confidence 355678889999988888763
No 368
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=30.29 E-value=68 Score=27.23 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=26.5
Q ss_pred CceEEEEEeCCCCCCc-ccHHH-HHH----HHHhc--CcEEEEEEccch
Q 020564 89 HREVLILYSALSTCDP-GDIME-TIQ----KCKES--KIRCSVIGLSAE 129 (324)
Q Consensus 89 ~reILil~gS~~t~d~-g~i~~-ti~----~akk~--~IrV~vI~Lgae 129 (324)
-|+||+|.||+..... ..+.+ .++ .+++. ++.|.+|-|+..
T Consensus 11 ~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~ 59 (191)
T 3k1y_A 11 MRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSEL 59 (191)
T ss_dssp SEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC
T ss_pred hceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhC
Confidence 3789999999975211 12223 333 34444 899999999754
No 369
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.29 E-value=9.9 Score=22.93 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=20.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++..|...|
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~H 34 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLIH 34 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHHc
Confidence 599999999998888888886654
No 370
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.11 E-value=21 Score=20.59 Aligned_cols=19 Identities=21% Similarity=0.630 Sum_probs=13.0
Q ss_pred CCCCCCCCceecCc-hhHHh
Q 020564 217 PTDCRICGLQLVSS-PHLAR 235 (324)
Q Consensus 217 P~~C~~C~l~Lvs~-~hLar 235 (324)
|-.|+.|+..+... .+|.+
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~ 28 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQR 28 (37)
T ss_dssp CEECSSSSCEECSSCHHHHH
T ss_pred CeECCCCChhhccCHHHHHH
Confidence 34566778888777 77764
No 371
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=29.98 E-value=50 Score=31.16 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=28.2
Q ss_pred ceEEEEEeCCCCCCcccHH---HHHHHHHhcCcEEEEEEccch
Q 020564 90 REVLILYSALSTCDPGDIM---ETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~---~ti~~akk~~IrV~vI~Lgae 129 (324)
+-||+|+. +. .||++ -+++.|+.++|+|..|-.+.+
T Consensus 99 ~GvL~ivk-NY---tGDvlNF~mAaE~a~~eGi~v~~VvV~DD 137 (332)
T 3ct4_A 99 AGVLLIIK-NY---LGDVMNFEMAREMAEMEEIKVEQIIVDDD 137 (332)
T ss_dssp SCEEEEEE-SC---HHHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred CCEEEEeC-Cc---HHHhhcHHHHHHHHHhcCCcEEEEEeCCc
Confidence 45898888 43 35555 589999999999999998754
No 372
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=29.68 E-value=2e+02 Score=22.54 Aligned_cols=77 Identities=23% Similarity=0.221 Sum_probs=48.2
Q ss_pred EeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEE
Q 020564 43 CLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCS 122 (324)
Q Consensus 43 ~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~ 122 (324)
++...+.|...+.+.|+++. +.|-..++.. -|+|=++... +..++......+++.|+++
T Consensus 19 vl~l~~~d~~~l~~~L~~ki------------~~aP~FF~~a------PVVlDl~~l~--~~~dl~~L~~~l~~~gl~~- 77 (120)
T 3ghf_A 19 VVHLHEAEPEVIRQALEDKI------------AQAPAFLKHA------PVVINVSGLE--SPVNWPELHKIVTSTGLRI- 77 (120)
T ss_dssp EEEEESCCHHHHHHHHHHHH------------HHSHHHHTTC------EEEEEEEECC--SSCCHHHHHHHHHTTTCEE-
T ss_pred EEEeCCCCHHHHHHHHHHHH------------HhChHhhCCC------cEEEEccccC--ChHHHHHHHHHHHHcCCEE-
Confidence 44555889999988888652 2222333333 3666566554 3457888899999999988
Q ss_pred EEEccc-hHHHHHHHHHhhC
Q 020564 123 VIGLSA-EMFICKHLCQDTG 141 (324)
Q Consensus 123 vI~Lga-e~~iLk~ia~~Tg 141 (324)
||+.+ ....+++.+..-|
T Consensus 78 -vGV~g~~~~~~~~~a~~~G 96 (120)
T 3ghf_A 78 -IGVSGCKDASLKVEIDRMG 96 (120)
T ss_dssp -EEEESCCCHHHHHHHHHHT
T ss_pred -EEEeCCCcHHHHHHHHHCC
Confidence 56654 2234556665544
No 373
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=29.38 E-value=46 Score=26.18 Aligned_cols=37 Identities=11% Similarity=0.218 Sum_probs=26.1
Q ss_pred eEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccc
Q 020564 91 EVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lga 128 (324)
+|+|+++|.+. +...+-+ .++.+++.++.|+++.+..
T Consensus 3 ki~I~y~S~tG-nT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 3 KVLIVFGSSTG-NTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp EEEEEEECSSS-HHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred eEEEEEECCCc-hHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 69999998743 2233443 4666788899999998853
No 374
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=29.36 E-value=75 Score=23.73 Aligned_cols=38 Identities=8% Similarity=0.125 Sum_probs=31.1
Q ss_pred cHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCe
Q 020564 106 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGS 143 (324)
Q Consensus 106 ~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~ 143 (324)
.=..+-+.|++.||....|-+..+....+++.+.++|.
T Consensus 16 ~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~ 53 (92)
T 2lqo_A 16 YCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGN 53 (92)
T ss_dssp SHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSS
T ss_pred hHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCC
Confidence 34578888999999999999988777778888887664
No 375
>1ble_A Fructose permease; phosphotransferase, sugar transport; 2.90A {Bacillus subtilis} SCOP: c.38.1.1
Probab=29.27 E-value=1.1e+02 Score=25.50 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=37.6
Q ss_pred HHHHHhhhcCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 54 HIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 54 ~~~~L~~~~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
+.+.+.+...|.|-..---.++-|...++.- .+...++++++.++ . .+..+.+.|+.+.-|.+|+
T Consensus 43 ~~k~~lk~a~P~gvk~~i~sve~ai~~~~~~-~~~~~~v~ll~k~p-----~----d~~~lve~Gv~i~~iNvG~ 107 (163)
T 1ble_A 43 MRKTLILSVAPSNVKASAVSVSKMAKAFHSP-RYEGVTAMLLFENP-----S----DIVSLIEAGVPIKTVNVGG 107 (163)
T ss_dssp HHHHHHHTSSCTTSEEEEECHHHHHHHHHCS-TTTTCEEEEEESSS-----H----HHHHHHTTTCCCCEEEEEE
T ss_pred HHHHHHHhhCCCCCeEEEEEHHHHHHHHhcc-cCCCceEEEEECCH-----H----HHHHHHHcCCCCCEEEECC
Confidence 3344433334555421111234445556653 34567899999855 2 3455678899888888874
No 376
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=29.20 E-value=20 Score=25.79 Aligned_cols=26 Identities=31% Similarity=0.675 Sum_probs=19.9
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCc
Q 020564 205 TCPRCKARVC-----ELPTDCRICGLQLVSS 230 (324)
Q Consensus 205 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 230 (324)
.||-|..+.- ..++.|..||.+|.-+
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~P 47 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVEP 47 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEEC
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEecC
Confidence 5899987654 3557899999998754
No 377
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=28.99 E-value=1.7e+02 Score=28.22 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=44.9
Q ss_pred EEEEeCCCCCCcccHH-HHHHHHHhc--CcEEEEEEc-cchHHHHHHHHHhhCCeeEEeCCHHHHHH
Q 020564 93 LILYSALSTCDPGDIM-ETIQKCKES--KIRCSVIGL-SAEMFICKHLCQDTGGSYSVALDESHFKE 155 (324)
Q Consensus 93 Lil~gS~~t~d~g~i~-~ti~~akk~--~IrV~vI~L-gae~~iLk~ia~~TgG~Y~va~d~~hl~~ 155 (324)
|+|+||- |+|- +|++..+++ +.+|...+- +..+..|.+.+++.+=.|-+..|++...+
T Consensus 24 i~ILGST-----GSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~ 85 (398)
T 2y1e_A 24 VVVLGST-----GSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQR 85 (398)
T ss_dssp EEEESTT-----SHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHH
T ss_pred EEEEccC-----cHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhh
Confidence 5666755 5687 689998887 455554444 44789999999999999999999888766
No 378
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.99 E-value=27 Score=21.30 Aligned_cols=24 Identities=25% Similarity=0.510 Sum_probs=16.8
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRTH 35 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHHH
T ss_pred CeECCCCCcccCchHHHHHHHHHc
Confidence 478888888887777776665443
No 379
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.93 E-value=28 Score=21.36 Aligned_cols=25 Identities=24% Similarity=0.421 Sum_probs=19.7
Q ss_pred eeeCC--CCCcccccccchhhhhcCCC
Q 020564 282 YVACP--KCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~--~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+ .|++.|-..-++-.|...|.
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 38 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRSHS 38 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTTSC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHhC
Confidence 48887 89888888888888877663
No 380
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=28.83 E-value=99 Score=30.56 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=55.7
Q ss_pred HHHHHhhhc-CCCCcc---hHHH-HHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 54 HIKALMGKL-GCSGDS---SLQN-ALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 54 ~~~~L~~~~-~~~G~~---sL~n-aL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
|++.+++.. +.-|-+ -.++ |.++|....+..+....++|+|+-|+.+ |-||=.-++..|+..|.+|.++-++.
T Consensus 12 ~~~~~~~~~~~~~gi~~~~LME~Ag~a~a~~i~~~~~~~~~~~v~VlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~~ 89 (502)
T 3rss_A 12 HMKEIDELTIKEYGVDSRILMERAGISVVLAMEEELGNLSDYRFLVLCGGGN--NGGDGFVVARNLLGVVKDVLVVFLGK 89 (502)
T ss_dssp CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHSCCTTCEEEEEECSSH--HHHHHHHHHHHHTTTSSEEEEEECCS
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhcCccCCCEEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEECC
Confidence 456665432 222433 3344 3444444444444334568999988653 46787889999999999999998864
Q ss_pred h----HHHHHHHHHhhCCeeE
Q 020564 129 E----MFICKHLCQDTGGSYS 145 (324)
Q Consensus 129 e----~~iLk~ia~~TgG~Y~ 145 (324)
. ...-.++.+..|+...
T Consensus 90 ~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 90 KKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp SCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHhCCCcee
Confidence 3 3333456667777654
No 381
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.82 E-value=12 Score=23.04 Aligned_cols=24 Identities=25% Similarity=0.700 Sum_probs=20.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|-..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRSH 35 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHHh
Confidence 599999999999888888876544
No 382
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=28.66 E-value=24 Score=25.44 Aligned_cols=21 Identities=38% Similarity=1.056 Sum_probs=16.1
Q ss_pred eecCCccccCeeEcCCCCccccc
Q 020564 193 SCHKEVKVGVGYTCPRCKARVCE 215 (324)
Q Consensus 193 ~CH~~~~~~~Gy~Cp~C~s~~C~ 215 (324)
.|-.++... ||.| +|+-.||.
T Consensus 20 ~C~kkvgl~-~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 20 VCRKRVGLT-GFMC-RCGTTFCG 40 (64)
T ss_dssp TTCCCCCTT-CEEC-SSSCEECT
T ss_pred hhCCccCcc-CEEe-ecCCEecc
Confidence 455666667 8999 89999985
No 383
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.36 E-value=29 Score=23.90 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=15.5
Q ss_pred eeCCCCCcccccccchhhhhcC
Q 020564 283 VACPKCKKHFCLECDIYIHESL 304 (324)
Q Consensus 283 ~~C~~C~~~fC~dCd~fihe~l 304 (324)
|+|+.|+..|-..=++..|...
T Consensus 46 ~~C~~C~~~f~~~~~L~~H~~~ 67 (77)
T 2ct1_A 46 FHCPHCDTVIARKSDLGVHLRK 67 (77)
T ss_dssp EECSSSSCEESSHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHH
Confidence 6777777777776666666554
No 384
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=28.35 E-value=55 Score=31.33 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=28.2
Q ss_pred ceEEEEEeCCCCCCcccHH---HHHHHHHhcCcEEEEEEccch
Q 020564 90 REVLILYSALSTCDPGDIM---ETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~---~ti~~akk~~IrV~vI~Lgae 129 (324)
+-||+|+. +. .||++ -+++.|+.++|+|.+|-++.+
T Consensus 107 ~GvL~ivk-NY---tGDvlNF~mA~E~a~~eGi~v~~Vvv~DD 145 (366)
T 1oi2_A 107 EGVLLIIK-NY---TGDILNFETATELLHDSGVKVTTVVIDDD 145 (366)
T ss_dssp SCEEEEEE-SS---HHHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred CCEEEEeC-Cc---HHHhhcHHHHHHHHHhcCCcEEEEEecCc
Confidence 45899987 43 35555 589999999999999998754
No 385
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=27.98 E-value=1.5e+02 Score=22.61 Aligned_cols=65 Identities=20% Similarity=0.279 Sum_probs=40.1
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccH---HHHHHHHHhcCcEEEEEEccchHH
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDI---METIQKCKESKIRCSVIGLSAEMF 131 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i---~~ti~~akk~~IrV~vI~Lgae~~ 131 (324)
.+|.-.++++=..-....... ...+.|++=++.....|...+ .+..+.+++ |+++.++++..++.
T Consensus 23 l~G~L~f~~a~~l~~~l~~~~--~~~~~vilDl~~v~~iDssgl~~L~~~~~~~~~-g~~l~l~~~~~~v~ 90 (118)
T 3ny7_A 23 VIGPLFFAAAEGLFTDLESRL--EGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPE-GCELRVCNVEFQPL 90 (118)
T ss_dssp EESCBCHHHHHHHHHHHHTTC--TTCSEEEEEEEECCCBCHHHHHHHHHHHHHCCT-TCEEEEECCCHHHH
T ss_pred EeceeEehhHHHHHHHHHHhc--CCCcEEEEEcCCCCeecHHHHHHHHHHHHHHHC-CCEEEEecCCHHHH
Confidence 456666666543332222222 234555555676666677644 367888899 99999999977653
No 386
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.96 E-value=16 Score=22.61 Aligned_cols=25 Identities=24% Similarity=0.531 Sum_probs=21.3
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|.|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRVHT 36 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHCS
T ss_pred CcCCCCcCchhCCHHHHHHHHHHhC
Confidence 5899999999999888888877663
No 387
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.87 E-value=39 Score=21.65 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=22.1
Q ss_pred eeeCCCCCcccccccchhhhhc-CC------CCCCCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHES-LH------NCPGCES 312 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~-lh------~CpgC~~ 312 (324)
.|.|+.|++.|=..=++-.|.. .| .|+.|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k 49 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCC
Confidence 4788888888877777777753 44 5777753
No 388
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=27.75 E-value=26 Score=25.18 Aligned_cols=28 Identities=21% Similarity=0.565 Sum_probs=23.9
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecCc
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQLVSS 230 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~Lvs~ 230 (324)
++.||.|....=..-..|-+|++..-++
T Consensus 8 ~W~CP~CTf~N~p~~p~CEmC~~prp~~ 35 (64)
T 3b08_B 8 GWQCPGCTFINKPTRPGCEMCCRARPET 35 (64)
T ss_dssp SEECTTTCCEECTTCSBCTTTCCBCCSS
T ss_pred CCcCCCccccCCCCCCccCcCCCCCCcc
Confidence 8999999988777778999999987554
No 389
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=27.70 E-value=70 Score=30.68 Aligned_cols=51 Identities=25% Similarity=0.430 Sum_probs=35.6
Q ss_pred CCCccccccccccCCCCCCCceeeCC--CCCcccccccchhhhhcC-----------CCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACP--KCKKHFCLECDIYIHESL-----------HNCPGCESL 313 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~--~C~~~fC~dCd~fihe~l-----------h~CpgC~~~ 313 (324)
+...|.-|...+...+ ......|. +|++.|=..|=.---.++ ..||.|...
T Consensus 307 ~~~ECaICys~~l~~g--~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRLDGG--EVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSCTTC--CCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeecCCC--CCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 5668999987776422 12235687 899999999975433333 579999763
No 390
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=27.61 E-value=1.6e+02 Score=20.67 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCcEEEEEEccc-----hHHHHHHHHHhhC----------CeeEEeCCHHHHHHHHH
Q 020564 107 IMETIQKCKESKIRCSVIGLSA-----EMFICKHLCQDTG----------GSYSVALDESHFKELIM 158 (324)
Q Consensus 107 i~~ti~~akk~~IrV~vI~Lga-----e~~iLk~ia~~Tg----------G~Y~va~d~~hl~~lL~ 158 (324)
-..+...+++.+|....+-+.. ...+.+++.+.+| |.+..-.|++.++++|.
T Consensus 25 C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 25 CKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETTEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECCEEEeCCCHHHHHHHhc
Confidence 3467778888899999988872 2345566666665 56666667777777663
No 391
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=27.52 E-value=2.1e+02 Score=22.74 Aligned_cols=69 Identities=13% Similarity=0.168 Sum_probs=41.4
Q ss_pred eEEEEEeCCC-CC-CcccHHHHHHHHH--h--cCcEEEEEEccc--hHHHHHHHHHhhCCeeE-E-eCCHHHHHHHHHh
Q 020564 91 EVLILYSALS-TC-DPGDIMETIQKCK--E--SKIRCSVIGLSA--EMFICKHLCQDTGGSYS-V-ALDESHFKELIME 159 (324)
Q Consensus 91 eILil~gS~~-t~-d~g~i~~ti~~ak--k--~~IrV~vI~Lga--e~~iLk~ia~~TgG~Y~-v-a~d~~hl~~lL~~ 159 (324)
.+++++|... .. +...+.+++..++ + .++++.++|-+. ...-+++.++..+...+ . ..+.+.+.++|..
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ 115 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS 115 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHH
Confidence 4677777665 21 2224446666664 3 268888888776 56677888777763223 1 2455567776654
No 392
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.47 E-value=13 Score=22.93 Aligned_cols=25 Identities=24% Similarity=0.503 Sum_probs=21.2
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHHC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhC
Confidence 5999999999999888888876663
No 393
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=27.40 E-value=94 Score=26.78 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 75 DLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 75 ~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
+-|...++.- .+...+|++|+.++ . .+..+.+.|+.+..|.+|.
T Consensus 84 e~ai~~~~~~-~~~~~~v~il~k~p-----~----d~~~lve~Gv~i~~vNvG~ 127 (187)
T 3lfj_A 84 DAALKEWSQK-TSVEEKVFLLFKNI-----D----TCKRVMDGGLPITTLNIGG 127 (187)
T ss_dssp HHHHHHHHSB-CSSCEEEEEEESSH-----H----HHHHHHHTTCCCSEEEEEE
T ss_pred HHHHHHHhCC-ccCCceEEEEECCH-----H----HHHHHHHcCCCCCEEEECC
Confidence 3444555542 34567899998744 2 3455677899988898884
No 394
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=27.37 E-value=86 Score=24.44 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=33.2
Q ss_pred CceEEEEEeCCCCCCcc---cHHHHHHHHHhcCcEEEEEEccchHH
Q 020564 89 HREVLILYSALSTCDPG---DIMETIQKCKESKIRCSVIGLSAEMF 131 (324)
Q Consensus 89 ~reILil~gS~~t~d~g---~i~~ti~~akk~~IrV~vI~Lgae~~ 131 (324)
.+.+|+=++.....|.. -+.++++.++..|.++.++|+.+++.
T Consensus 43 ~~~vIlDlsgV~~iDs~g~~~L~~~~~~~~l~G~~~~l~Gi~p~va 88 (123)
T 3zxn_A 43 GKGLVIDISALEVVDEFVTRVLIEISRLAELLGLPFVLTGIKPAVA 88 (123)
T ss_dssp CSEEEEECTTCSSCCHHHHHHHHHHHHHHHHHTCCEEEECCCHHHH
T ss_pred CCEEEEEcCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 34455556777777874 45588999999999999999988764
No 395
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.27 E-value=55 Score=23.84 Aligned_cols=45 Identities=24% Similarity=0.550 Sum_probs=32.5
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcccccccchhhhhcC--CCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESL--HNCPGCESL 313 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe~l--h~CpgC~~~ 313 (324)
...|..|...|.. ..+|+.|++.|=.+|=.---.+- .+||.|...
T Consensus 15 i~~C~IC~~~i~~-------g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS-------SEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSC
T ss_pred CCcCcchhhHccc-------CCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCc
Confidence 3579999987752 25899999999888854222343 799999864
No 396
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=27.22 E-value=32 Score=26.22 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=20.9
Q ss_pred eEcCCCCcccc-----cCCCCCCCCCceecCc
Q 020564 204 YTCPRCKARVC-----ELPTDCRICGLQLVSS 230 (324)
Q Consensus 204 y~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 230 (324)
-.||-|..+.- ...+.|..||.+|.-+
T Consensus 37 VkCp~C~~~~~VFShA~t~V~C~~CgtvL~~P 68 (86)
T 3iz6_X 37 VKCQGCFNITTVFSHSQTVVVCPGCQTVLCQP 68 (86)
T ss_dssp EECTTTCCEEEEETTCSSCCCCSSSCCCCSCC
T ss_pred EECCCCCCeeEEEecCCcEEEccCCCCEeecC
Confidence 36999998765 4568999999998643
No 397
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.14 E-value=23 Score=20.36 Aligned_cols=19 Identities=11% Similarity=0.398 Sum_probs=13.8
Q ss_pred CCCCCCCCceecCchhHHh
Q 020564 217 PTDCRICGLQLVSSPHLAR 235 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLar 235 (324)
|-.|+.|+..+....+|.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~ 27 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKS 27 (37)
T ss_dssp CCEETTTTEECSSHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHH
Confidence 4466778888888777765
No 398
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=27.03 E-value=1.6e+02 Score=23.39 Aligned_cols=70 Identities=7% Similarity=0.072 Sum_probs=42.8
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhc-CcEEEEEEccchHHHHHHHHH--hh---CC-eeEEeCCHHHHHHHHHhcC
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKES-KIRCSVIGLSAEMFICKHLCQ--DT---GG-SYSVALDESHFKELIMEHA 161 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~-~IrV~vI~Lgae~~iLk~ia~--~T---gG-~Y~va~d~~hl~~lL~~~~ 161 (324)
+.+++++|.... ..++...++.+++. ++++.++|-+.+..-+++.++ .- +. .|.-..+.+.+.++|....
T Consensus 23 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 23 GDFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CSCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 457777776642 34566666666664 899999998776555555555 21 12 3344556666777776543
No 399
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=27.01 E-value=1.2e+02 Score=28.10 Aligned_cols=39 Identities=3% Similarity=0.198 Sum_probs=27.0
Q ss_pred CceEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccc
Q 020564 89 HREVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 89 ~reILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lga 128 (324)
.++|+|+++|.+. +...+-+ .++.+++.++.|.++.+..
T Consensus 256 ~~kv~iiy~S~~G-nT~~la~~i~~~l~~~g~~v~~~~l~~ 295 (414)
T 2q9u_A 256 QKKVTVVLDSMYG-TTHRMALALLDGARSTGCETVLLEMTS 295 (414)
T ss_dssp CSEEEEEECCSSS-HHHHHHHHHHHHHHHTTCEEEEEEGGG
T ss_pred CCeEEEEEECCCc-hHHHHHHHHHHHHHhCCCeEEEEEcCc
Confidence 4579999998743 2333443 4666777899999998853
No 400
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.94 E-value=52 Score=25.79 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=24.4
Q ss_pred eEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEcc
Q 020564 91 EVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLS 127 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lg 127 (324)
+|+|+++|.+. +...+-+ .++.+.+.++.|.++.+.
T Consensus 2 ki~iiy~S~~G-nt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 2 KALIVYGSTTG-NTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp EEEEEEECSSS-HHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred eEEEEEECCcC-HHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 58999998853 2223333 355677788999988874
No 401
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=26.82 E-value=20 Score=30.66 Aligned_cols=29 Identities=21% Similarity=0.413 Sum_probs=20.5
Q ss_pred ccccccccccCCCCCCCceeeCCCCCcccccccc
Q 020564 264 TCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECD 297 (324)
Q Consensus 264 ~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd 297 (324)
.|..|++.+... ..+.|+|++|+.. .+|+
T Consensus 44 ACp~CnKKV~~~---~~g~~~CekC~~~--~~~~ 72 (172)
T 3u50_C 44 RCTCQGKSVLKY---HGDSFFCESCQQF--INPQ 72 (172)
T ss_dssp ECTTSCCCEEEE---TTTEEEETTTTEE--CCCE
T ss_pred hchhhCCEeeeC---CCCeEECCCCCCC--CCce
Confidence 588899888632 2358999999986 4443
No 402
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.47 E-value=51 Score=27.62 Aligned_cols=39 Identities=3% Similarity=0.105 Sum_probs=28.2
Q ss_pred ceEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccch
Q 020564 90 REVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lgae 129 (324)
.+||||++|+.. +...+-+ .++.+++.++.|.++-|...
T Consensus 7 mkilii~~S~~g-~T~~la~~i~~~l~~~g~~v~~~~l~~~ 46 (211)
T 1ydg_A 7 VKLAIVFYSSTG-TGYAMAQEAAEAGRAAGAEVRLLKVRET 46 (211)
T ss_dssp CEEEEEECCSSS-HHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CeEEEEEECCCC-hHHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 479999999832 2333443 46777888999999999764
No 403
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=26.46 E-value=46 Score=27.42 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=27.4
Q ss_pred ceEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccch
Q 020564 90 REVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lgae 129 (324)
.+|+||++|... +...+-+ .++.+++.++.|.++.+...
T Consensus 6 ~kilii~~S~~g-~T~~la~~i~~~l~~~g~~v~~~~l~~~ 45 (200)
T 2a5l_A 6 PYILVLYYSRHG-ATAEMARQIARGVEQGGFEARVRTVPAV 45 (200)
T ss_dssp CEEEEEECCSSS-HHHHHHHHHHHHHHHTTCEEEEEBCCCE
T ss_pred ceEEEEEeCCCC-hHHHHHHHHHHHHhhCCCEEEEEEhhhc
Confidence 369999999732 2223433 46677888999999999653
No 404
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=26.24 E-value=1.7e+02 Score=24.98 Aligned_cols=75 Identities=16% Similarity=0.098 Sum_probs=47.3
Q ss_pred CceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch------HHHHHHHHHhhCCee-EEeCCHHHHHHHHHhcC
Q 020564 89 HREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE------MFICKHLCQDTGGSY-SVALDESHFKELIMEHA 161 (324)
Q Consensus 89 ~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae------~~iLk~ia~~TgG~Y-~va~d~~hl~~lL~~~~ 161 (324)
+.+|.|++||.+ |-.-..++++.|++.||..++=-.++. ..+.++..+.--..+ -++--+.||--.+...+
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t 84 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT 84 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhcc
Confidence 346999998763 333334789999999999887666654 233444333322344 45556778888777777
Q ss_pred CCCc
Q 020564 162 PPPP 165 (324)
Q Consensus 162 ~pp~ 165 (324)
+-|.
T Consensus 85 ~~PV 88 (174)
T 3lp6_A 85 PLPV 88 (174)
T ss_dssp SSCE
T ss_pred CCCE
Confidence 5554
No 405
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=26.22 E-value=27 Score=24.65 Aligned_cols=21 Identities=33% Similarity=0.903 Sum_probs=15.7
Q ss_pred eeEcCCCCcccccCC-CCCCCCCc
Q 020564 203 GYTCPRCKARVCELP-TDCRICGL 225 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP-~~C~~C~l 225 (324)
--.||+|+.. .+| -.|+.||.
T Consensus 30 l~~c~~cG~~--~~pH~vc~~CG~ 51 (60)
T 2zjr_Z 30 LTECPQCHGK--KLSHHICPNCGY 51 (60)
T ss_dssp CEECTTTCCE--ECTTBCCTTTCB
T ss_pred ceECCCCCCE--eCCceEcCCCCc
Confidence 3478888888 566 67888884
No 406
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.95 E-value=61 Score=25.17 Aligned_cols=71 Identities=15% Similarity=0.324 Sum_probs=42.7
Q ss_pred CCCCCCC--CCceecCchhHHhhhc-ccCCCCCCcccCccCCCCCCCCCCCcccc--ccccccCCCC---------CCCc
Q 020564 216 LPTDCRI--CGLQLVSSPHLARSYH-HLFPIAPFDEVTPLCLNDPRNRSRSTCFG--CQQSLLSSGN---------KPGL 281 (324)
Q Consensus 216 lP~~C~~--C~l~Lvs~~hLarsyh-hl~p~~~f~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~---------~~~~ 281 (324)
-|-.|+. |+..+.+...|.+-.- |. .- ..-.|.- |.+.|..... ....
T Consensus 66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~-----------------~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~ 127 (155)
T 2gli_A 66 KPHKCTFEGCRKSYSRLENLKTHLRSHT-GE-----------------KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127 (155)
T ss_dssp CCCCCCSTTCCCCCSSHHHHHHHHHHTT-TC-----------------CCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred CCccCCCCCCCCcccCHHHHHHHHHHcC-CC-----------------CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence 3556764 8888888887765321 11 00 1235775 8888865431 1223
Q ss_pred eeeCCC--CCcccccccchhhhhcC
Q 020564 282 YVACPK--CKKHFCLECDIYIHESL 304 (324)
Q Consensus 282 ~~~C~~--C~~~fC~dCd~fihe~l 304 (324)
.|.|+. |+..|=..=++-.|...
T Consensus 128 ~~~C~~~~C~~~f~~~~~L~~H~~~ 152 (155)
T 2gli_A 128 PYVCKLPGCTKRYTDPSSLRKHVKT 152 (155)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCccccCCHHHHHHHHHh
Confidence 599987 99988666555555443
No 407
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.92 E-value=14 Score=22.70 Aligned_cols=25 Identities=28% Similarity=0.582 Sum_probs=20.9
Q ss_pred eeeCCCCCcccccccchhhhhcCCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
.|+|+.|++.|=..-++-.|...|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQATHS 36 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHHHC
T ss_pred CeeccccCChhcCHHHHHHHHHHcC
Confidence 5999999999999888888876653
No 408
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=25.81 E-value=28 Score=25.78 Aligned_cols=21 Identities=48% Similarity=1.173 Sum_probs=16.0
Q ss_pred eecCCccccCeeEcCCCCccccc
Q 020564 193 SCHKEVKVGVGYTCPRCKARVCE 215 (324)
Q Consensus 193 ~CH~~~~~~~Gy~Cp~C~s~~C~ 215 (324)
.|-.++... ||.| +|+-.||.
T Consensus 30 ~C~kkvgL~-~f~C-rCg~~FCs 50 (74)
T 1wfp_A 30 SCNKKVGVT-GFKC-RCGSTFCG 50 (74)
T ss_dssp SSCCBCTTT-CEEC-TTSCEECT
T ss_pred hhcCccccc-ceEe-ccCCEecc
Confidence 455566666 8999 89999985
No 409
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=25.77 E-value=25 Score=21.75 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=17.0
Q ss_pred cCCCCCCCCCceecCchhHHhh
Q 020564 215 ELPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 215 ~lP~~C~~C~l~Lvs~~hLars 236 (324)
+-|-+|+.||..+...-+|.|-
T Consensus 6 ekp~~C~~CgK~F~~~s~L~~H 27 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPSTLEAH 27 (36)
T ss_dssp CCCCEETTTTEECSCHHHHHHH
T ss_pred ccCeECCCCCCccCCHhHccCc
Confidence 3466788899999998888763
No 410
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=25.71 E-value=77 Score=25.15 Aligned_cols=57 Identities=12% Similarity=0.016 Sum_probs=38.4
Q ss_pred cchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCC--Ccc-----------cHHHHHHHHHhcCcEEEEEEccc
Q 020564 67 DSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTC--DPG-----------DIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 67 ~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~--d~g-----------~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.....+|+.+|..++..- .+|-||+...... .++ ++.+.++.+++.||+|+++..+.
T Consensus 29 ~~~~~~al~lA~~A~a~g-----~eV~vFf~~dGV~~l~k~~~~~i~~~~~~~~~~ll~~~~~~Gv~v~vC~~s~ 98 (134)
T 3mc3_A 29 LDRTYAPLFMASISASME-----YETSVFFMIXGPXLLDXXWQEEERXXGGNPFIHFFDMAXENGVXMYVCVQSL 98 (134)
T ss_dssp THHHHHHHHHHHHHHHTT-----CEEEEEECTTGGGGGBHHHHHHHHHHCCCHHHHHHHHHHHTTCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHCC-----CCEEEEEEeCcHHHHhhcchhhcccCCCCCHHHHHHHHHHcCCcEEEcHhHH
Confidence 346677888888877642 4677776433221 121 24567899999999999998876
No 411
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=25.65 E-value=15 Score=22.74 Aligned_cols=24 Identities=25% Similarity=0.706 Sum_probs=20.4
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|++.|=..-++-.|...|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRIH 35 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHH
T ss_pred CEECCCCCcccCCHHHHHHHHHHh
Confidence 599999999999888888887655
No 412
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=25.53 E-value=73 Score=28.89 Aligned_cols=42 Identities=12% Similarity=0.218 Sum_probs=29.3
Q ss_pred CCCceEEEEEeCCC------------CCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 87 YGHREVLILYSALS------------TCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 87 ~~~reILil~gS~~------------t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+.++|||++++-. .....++...++.+++.|+.|++++..+
T Consensus 46 ~g~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g 99 (291)
T 1n57_A 46 RGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISG 99 (291)
T ss_dssp CSSCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 44568999987632 0122244456888999999999999864
No 413
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=25.52 E-value=33 Score=37.31 Aligned_cols=26 Identities=38% Similarity=0.991 Sum_probs=20.0
Q ss_pred eeEcCCCCc-c---------cccCC-CCCCCCCceec
Q 020564 203 GYTCPRCKA-R---------VCELP-TDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s-~---------~C~lP-~~C~~C~l~Lv 228 (324)
.|+||.|+- - =++|| -.||.||..|.
T Consensus 502 hy~c~~c~~~ef~~~~~~~~g~dlp~k~cp~cg~~~~ 538 (1041)
T 3f2b_A 502 HYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTKYK 538 (1041)
T ss_dssp EEECTTTCCEEECCSSCCSCGGGSCCCBCTTTCCBCE
T ss_pred cccCccccccccccccccccccCCccccCcccccccc
Confidence 899999983 1 24577 58999999864
No 414
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=25.33 E-value=19 Score=26.29 Aligned_cols=40 Identities=28% Similarity=0.641 Sum_probs=27.9
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLR 314 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~ 314 (324)
..|.-|...+.+. ++ -.|++. ||.+|-. .+..||.|-...
T Consensus 19 ~~C~IC~~~~~~~------v~--~pCgH~~~C~~C~~----~~~~CP~Cr~~i 59 (79)
T 2yho_A 19 MLCMVCCEEEINS------TF--CPCGHTVCCESCAA----QLQSCPVCRSRV 59 (79)
T ss_dssp TBCTTTSSSBCCE------EE--ETTCBCCBCHHHHT----TCSBCTTTCCBC
T ss_pred CEeEEeCcccCcE------EE--ECCCCHHHHHHHHH----hcCcCCCCCchh
Confidence 4699997555321 22 268998 9999976 346999998644
No 415
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=24.99 E-value=2e+02 Score=27.47 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=53.2
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEcc-----ch---HHHHHHHHHhhCC--eeEE-eCCHHHHHHHHH
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLS-----AE---MFICKHLCQDTGG--SYSV-ALDESHFKELIM 158 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lg-----ae---~~iLk~ia~~TgG--~Y~v-a~d~~hl~~lL~ 158 (324)
++|+|+.+ +....-.++.+++.|+.|-.++.. -+ ...|+++.+.-+. .-.+ -.|...+.+++.
T Consensus 318 Krv~i~g~------~~~~~~la~~L~elGm~vv~~gt~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~d~~el~~~i~ 391 (460)
T 2xdq_A 318 KSVFFMGD------NLLEISLARFLIRCGMRVLEIGIPYMDKRYQAAELALLSQTCAEMGHPLPTIVEKPDNYNQLQRIK 391 (460)
T ss_dssp CEEEECCC------SSCHHHHHHHHHHTTCEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCCCEEEESCCHHHHHHHHH
T ss_pred CEEEEECC------chHHHHHHHHHHHCCCEEEEeCCCCCChhHHHHHHHHHHHHHHhhCCCCcEEEECCCHHHHHHHHh
Confidence 45666532 334556778888999999887743 11 3457777666553 3333 357777888777
Q ss_pred hcCCCCccchh-hhhhceeeecCCCC
Q 020564 159 EHAPPPPAIAE-FAIANLIKMGFPQR 183 (324)
Q Consensus 159 ~~~~pp~~~~~-~~~~~Li~mGfP~~ 183 (324)
+.- |+-.-.. +....++++|||..
T Consensus 392 ~~~-pDL~ig~~~~~~~~~r~G~P~~ 416 (460)
T 2xdq_A 392 ALQ-PDLVITGMAHANPLEARGISTK 416 (460)
T ss_dssp HHC-CSEEEECHHHHHHHHTBTCCEE
T ss_pred ccC-CCEEEeCcccCceeeeccCcEE
Confidence 653 4433322 22245889999975
No 416
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=24.81 E-value=2.3e+02 Score=21.60 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=30.6
Q ss_pred ceEEEEEeCCCCCCcccH---HHHHHHHHhcCcEEEEEEccchHH
Q 020564 90 REVLILYSALSTCDPGDI---METIQKCKESKIRCSVIGLSAEMF 131 (324)
Q Consensus 90 reILil~gS~~t~d~g~i---~~ti~~akk~~IrV~vI~Lgae~~ 131 (324)
+.|++=++.....|...+ .+..+.+++.|+++.++++..++.
T Consensus 50 ~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v~ 94 (130)
T 4dgh_A 50 QILILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLISGANSRVS 94 (130)
T ss_dssp SEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEECCCHHHH
T ss_pred CEEEEECCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 445554566666676543 378899999999999999987753
No 417
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=24.69 E-value=1.9e+02 Score=22.48 Aligned_cols=42 Identities=14% Similarity=0.248 Sum_probs=30.9
Q ss_pred CceEEEEEeCCCCCCccc---HHHHHHHHHhcCcEEEEEEccchH
Q 020564 89 HREVLILYSALSTCDPGD---IMETIQKCKESKIRCSVIGLSAEM 130 (324)
Q Consensus 89 ~reILil~gS~~t~d~g~---i~~ti~~akk~~IrV~vI~Lgae~ 130 (324)
.+.|++=++.....|... +.+..+.+++.|+++.++++..++
T Consensus 64 ~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 108 (143)
T 3llo_A 64 IHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQV 108 (143)
T ss_dssp CSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEESCCHHH
T ss_pred ceEEEEECCCCccccHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 344555566666667754 347889999999999999998765
No 418
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=24.51 E-value=33 Score=25.87 Aligned_cols=26 Identities=23% Similarity=0.639 Sum_probs=20.5
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCc
Q 020564 205 TCPRCKARVC-----ELPTDCRICGLQLVSS 230 (324)
Q Consensus 205 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 230 (324)
.||.|..+.- ..++.|..||.+|.-+
T Consensus 36 kCp~C~~~q~VFSha~t~V~C~~Cg~~L~~P 66 (82)
T 3u5c_b 36 KCPGCLNITTVFSHAQTAVTCESCSTILCTP 66 (82)
T ss_dssp ECTTSCSCEEEESBCSSCCCCSSSCCCCEEC
T ss_pred ECCCCCCeeEEEecCCeEEEccccCCEEecc
Confidence 5999998654 4568999999998643
No 419
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=24.51 E-value=96 Score=28.04 Aligned_cols=44 Identities=9% Similarity=0.146 Sum_probs=35.1
Q ss_pred CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEE
Q 020564 103 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSV 146 (324)
Q Consensus 103 d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~v 146 (324)
.|.++.++++.+|+.+|++=++--.....+.+.||+.||+.-.+
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ 265 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVEL 265 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEE
Confidence 45578899999999999976665555568899999999987644
No 420
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=24.43 E-value=28 Score=22.49 Aligned_cols=11 Identities=27% Similarity=0.739 Sum_probs=8.8
Q ss_pred eeEcCCCCccc
Q 020564 203 GYTCPRCKARV 213 (324)
Q Consensus 203 Gy~Cp~C~s~~ 213 (324)
.|.||+|+..+
T Consensus 9 ~~~C~~C~~~i 19 (39)
T 2i5o_A 9 QVPCEKCGSLV 19 (39)
T ss_dssp EEECTTTCCEE
T ss_pred CcccccccCcC
Confidence 78999998753
No 421
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=24.36 E-value=31 Score=23.61 Aligned_cols=31 Identities=19% Similarity=0.588 Sum_probs=18.4
Q ss_pred CCccccccc--------cccCCCCCCCceeeCCCCCccc
Q 020564 262 RSTCFGCQQ--------SLLSSGNKPGLYVACPKCKKHF 292 (324)
Q Consensus 262 ~~~C~~C~~--------~~~~~~~~~~~~~~C~~C~~~f 292 (324)
...|..|.. ++.+.+...+..|.|.+|++.+
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w 53 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTW 53 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEe
Confidence 346888842 2222223345679999998753
No 422
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=24.23 E-value=2e+02 Score=21.98 Aligned_cols=50 Identities=8% Similarity=0.159 Sum_probs=35.1
Q ss_pred CceEEEEEeCCCCCCcccH---HHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhC
Q 020564 89 HREVLILYSALSTCDPGDI---METIQKCKESKIRCSVIGLSAEMFICKHLCQDTG 141 (324)
Q Consensus 89 ~reILil~gS~~t~d~g~i---~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~Tg 141 (324)
.+.|++=++.....|..-+ ..+.+.+++.|+++.++++..++ +++-+.||
T Consensus 52 ~~~vvlDls~V~~iDSsGl~~L~~~~~~~~~~g~~l~l~~~~~~v---~~~l~~~g 104 (125)
T 2ka5_A 52 YNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALVSPNEKV---ERVLSLTN 104 (125)
T ss_dssp CCEEEEECTTCSCCCHHHHHHHHHHHHHHHHHTCEEEEECCCHHH---HHHHHHTT
T ss_pred CCEEEEECCCCCEEcHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHcC
Confidence 3455555666666677644 36788899999999999997665 34445555
No 423
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=24.16 E-value=2.2e+02 Score=26.38 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=46.5
Q ss_pred ceEEEEEeCCCCC-CcccHHHHHHHHHhcCcEEEEEEccc--hHHHHHHHHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 020564 90 REVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSA--EMFICKHLCQDTGGS--YSVALDESHFKELIMEHA 161 (324)
Q Consensus 90 reILil~gS~~t~-d~g~i~~ti~~akk~~IrV~vI~Lga--e~~iLk~ia~~TgG~--Y~va~d~~hl~~lL~~~~ 161 (324)
+.+++++|..... +...+.+++..+++.++++-++|=|. ....++++++..|+. ++...+.+.+.++|....
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCC
Confidence 3467777766431 22234467777776799999999875 356788888877653 345556666677776543
No 424
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=24.13 E-value=52 Score=20.05 Aligned_cols=24 Identities=17% Similarity=0.509 Sum_probs=20.3
Q ss_pred eeEcCCCCcccccCCCCCCCCCce
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~ 226 (324)
++.||.|-...=..-..|.+|+..
T Consensus 8 ~W~C~~CT~~N~~~~~~Ce~C~~~ 31 (34)
T 3a9j_C 8 QWNCTACTFLNHPALIRCEQCEMP 31 (34)
T ss_dssp CEECTTTCCEECTTCSBCTTTCCB
T ss_pred cCCCCCCccccCCCCCeeCCCCCc
Confidence 789999998877777899999864
No 425
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=23.97 E-value=43 Score=29.84 Aligned_cols=43 Identities=23% Similarity=0.590 Sum_probs=30.7
Q ss_pred CccccccccccCCCCCCCceeeCCCCCcccccccchh-h-hhcCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIY-I-HESLHNCPGCES 312 (324)
Q Consensus 263 ~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~f-i-he~lh~CpgC~~ 312 (324)
..|..|...+.. ..+|+.|+..|=.+|=-- + +..-+.||.|..
T Consensus 181 ~~C~iC~~iv~~-------g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 181 KICNICHSLLIQ-------GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CBCTTTCSBCSS-------CEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CcCcchhhHHhC-------CcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 469999866542 378999998887777532 2 223569999976
No 426
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=23.93 E-value=30 Score=24.04 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=15.7
Q ss_pred eEcCCCCcc--ccc---CCCCCCCCCceec
Q 020564 204 YTCPRCKAR--VCE---LPTDCRICGLQLV 228 (324)
Q Consensus 204 y~Cp~C~s~--~C~---lP~~C~~C~l~Lv 228 (324)
..||.|++. +=. =-.+|..||+.|-
T Consensus 12 ~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 12 VTCPNHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp CSBTTBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred ccCcCCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 468888762 111 1257888888863
No 427
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=23.91 E-value=1.2e+02 Score=27.68 Aligned_cols=41 Identities=12% Similarity=0.228 Sum_probs=31.2
Q ss_pred cHHHHHHHHHhcCcEEEEEEccc----hHHHHHHHHHhhCCeeEE
Q 020564 106 DIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSYSV 146 (324)
Q Consensus 106 ~i~~ti~~akk~~IrV~vI~Lga----e~~iLk~ia~~TgG~Y~v 146 (324)
...++++.|+++||.|.+|.+.. +...+++.++.|+-...+
T Consensus 216 ~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~v 260 (324)
T 1umd_B 216 EVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLV 260 (324)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeceecCCCHHHHHHHHhcCCeEEEE
Confidence 44578899999999999999964 345678888888855444
No 428
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.89 E-value=36 Score=20.62 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=16.0
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 020564 216 LPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars 236 (324)
-|-.|+.||..+.+...|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIH 31 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHH
T ss_pred CCccCCccChhhCCHHHHHHH
Confidence 355778889999888888753
No 429
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=23.69 E-value=1.9e+02 Score=21.93 Aligned_cols=50 Identities=8% Similarity=0.105 Sum_probs=36.6
Q ss_pred eEEEEE-eCCCCCCccc--HHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCC
Q 020564 91 EVLILY-SALSTCDPGD--IMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 142 (324)
Q Consensus 91 eILil~-gS~~t~d~g~--i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG 142 (324)
.|+|+. |.+. .++- =.++.+.|++.||....+-+..+..+.+++.+.||.
T Consensus 17 ~Vvlf~kg~~~--~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~ 69 (111)
T 3zyw_A 17 PCMLFMKGTPQ--EPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSW 69 (111)
T ss_dssp SEEEEESBCSS--SBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred CEEEEEecCCC--CCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHCC
Confidence 477666 3333 2332 337888999999999999998877788888888873
No 430
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.69 E-value=34 Score=32.13 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=23.7
Q ss_pred eeEcCCCCcccccC--CCCCCCCCceecCch
Q 020564 203 GYTCPRCKARVCEL--PTDCRICGLQLVSSP 231 (324)
Q Consensus 203 Gy~Cp~C~s~~C~l--P~~C~~C~l~Lvs~~ 231 (324)
--.||-|+|+|..- -..|++|++.-|-.+
T Consensus 278 ~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~ 308 (320)
T 3mkr_B 278 VEKCPLSGACYSPEFKGQICKVTTVTEIGKD 308 (320)
T ss_dssp CEECTTTCCEECGGGTTSBCTTTSSBBSSCC
T ss_pred CccCCCCCCeechhhCCCCCCCCcCcccCCc
Confidence 45899999999864 579999999877554
No 431
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=23.68 E-value=2.4e+02 Score=26.21 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=46.5
Q ss_pred eEEEEEeCCCCC-CcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhhCCe--eEEeCCHHHHHHHHHhcC
Q 020564 91 EVLILYSALSTC-DPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDTGGS--YSVALDESHFKELIMEHA 161 (324)
Q Consensus 91 eILil~gS~~t~-d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~TgG~--Y~va~d~~hl~~lL~~~~ 161 (324)
.+|+++|..... +...+.+++..+++.++++-++|=|.+ ...|+++++..++. ++.-.+.+.+.++|....
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 367 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCD 367 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCS
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCC
Confidence 367777766431 222344677777777999999998853 56788888777643 245556666677776543
No 432
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.65 E-value=17 Score=25.75 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=22.9
Q ss_pred ceeeCCCCCcccccccchhhhhcCCC
Q 020564 281 LYVACPKCKKHFCLECDIYIHESLHN 306 (324)
Q Consensus 281 ~~~~C~~C~~~fC~dCd~fihe~lh~ 306 (324)
..|+|+.|++.|-..-.+-.|...|.
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~Ht 37 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQHG 37 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHhhhhhhC
Confidence 36999999999999999999988874
No 433
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.52 E-value=17 Score=22.46 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=20.2
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|+|+.|++.|=..=++-.|...|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRSH 35 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHhc
Confidence 599999999998888888886655
No 434
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=23.44 E-value=1e+02 Score=27.64 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=35.2
Q ss_pred CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEE
Q 020564 103 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSV 146 (324)
Q Consensus 103 d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~v 146 (324)
.+.++.++++.+|+.+|++=++--.....+.+.|++.||....+
T Consensus 211 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ 254 (284)
T 3cx3_A 211 SPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKT 254 (284)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEE
Confidence 45588899999999999966555445568899999999988754
No 435
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.32 E-value=1.1e+02 Score=27.15 Aligned_cols=40 Identities=23% Similarity=0.195 Sum_probs=28.0
Q ss_pred CceEEEEEeCCCCC-CcccHHH-HHHHHHhcCcEEEEEEccc
Q 020564 89 HREVLILYSALSTC-DPGDIME-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 89 ~reILil~gS~~t~-d~g~i~~-ti~~akk~~IrV~vI~Lga 128 (324)
..+||+|.||+... ....+.+ .++.+++.++.|.+|-|..
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~ 75 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSG 75 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTT
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhc
Confidence 35799999999741 1112333 4667778899999999964
No 436
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=23.24 E-value=28 Score=26.20 Aligned_cols=26 Identities=19% Similarity=0.510 Sum_probs=20.8
Q ss_pred EcCCCCcccc-----cCCCCCCCCCceecCc
Q 020564 205 TCPRCKARVC-----ELPTDCRICGLQLVSS 230 (324)
Q Consensus 205 ~Cp~C~s~~C-----~lP~~C~~C~l~Lvs~ 230 (324)
-||.|..+.- ..++.|..||.+|.-+
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~P 64 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCKP 64 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEEE
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEeec
Confidence 6999998765 4568999999998754
No 437
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=23.24 E-value=1.3e+02 Score=25.74 Aligned_cols=77 Identities=14% Similarity=0.029 Sum_probs=49.8
Q ss_pred CCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhh---C-Cee-EEeCCHHHHHHHHHh
Q 020564 87 YGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDT---G-GSY-SVALDESHFKELIME 159 (324)
Q Consensus 87 ~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~T---g-G~Y-~va~d~~hl~~lL~~ 159 (324)
|.+.+|.|++||.+ |-.-..++++.|++.||..++=-.++. ..-+.++++.. | -.+ -++--+.||--.+..
T Consensus 9 ~~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~ 86 (170)
T 1xmp_A 9 HMKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAA 86 (170)
T ss_dssp --CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHT
T ss_pred cCCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHh
Confidence 44668999999764 333334789999999999887666654 23344444432 1 233 455667788888888
Q ss_pred cCCCCc
Q 020564 160 HAPPPP 165 (324)
Q Consensus 160 ~~~pp~ 165 (324)
.++-|.
T Consensus 87 ~t~~PV 92 (170)
T 1xmp_A 87 KTNLPV 92 (170)
T ss_dssp TCCSCE
T ss_pred ccCCCE
Confidence 876554
No 438
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=22.99 E-value=1.7e+02 Score=25.89 Aligned_cols=63 Identities=6% Similarity=0.024 Sum_probs=29.5
Q ss_pred EeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcC
Q 020564 43 CLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESK 118 (324)
Q Consensus 43 ~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~ 118 (324)
.+.|+||.....- ..+.+|+++|+..++....-.-|+|=+++- ++..||..-.+.++.|.+.+
T Consensus 12 ~~~plsG~~a~~G------------~~~~~g~~lAv~~iN~~GGi~Gr~ielv~~-D~~~~p~~a~~~a~~li~~~ 74 (353)
T 4gnr_A 12 FNFEESGSLAAYG------------TAEQKGAQLAVDEINAAGGIDGKQIEVVDK-DNKSETAEAASVTTNLVTQS 74 (353)
T ss_dssp EEECCSSTTHHHH------------HHHHHHHHHHHHHHHHTTCBTTBEEEEEEE-ECTTCHHHHHHHHHHHHHTS
T ss_pred EEeCCcCchhHhH------------HHHHHHHHHHHHHHHhcCCCCCeEEEEEEe-cCCCCHHHHHHHHHHHHhhC
Confidence 3567887754331 234556666666665442222233433332 22334444444444444443
No 439
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=22.97 E-value=42 Score=23.98 Aligned_cols=61 Identities=20% Similarity=0.407 Sum_probs=30.2
Q ss_pred cccCCCCCCcccCccCCCCCCCCCCCccccccccccCCCCCCCceeeCCCCCcccccccchhhhh---cCCCCCCCC
Q 020564 238 HHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHE---SLHNCPGCE 311 (324)
Q Consensus 238 hhl~p~~~f~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~fihe---~lh~CpgC~ 311 (324)
||-++..+..+-. ......+| -|+++..+ ....+|..|...|=.+|--.--+ ....||.|.
T Consensus 2 ~~~~~~~~~~~~~-------~~~~~~~C-iC~~~~~~-----~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 2 HHHHHHSSGRENL-------YFQGLVTC-FCMKPFAG-----RPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp ------------C-------TTTTCCCS-TTCCCCTT-----CCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred cccccCCcccccC-------CCCCceEe-ECCCcCCC-----CCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 4555666555532 12246689 88865431 23568999999987777655443 245666663
No 440
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.90 E-value=43 Score=23.99 Aligned_cols=25 Identities=36% Similarity=0.708 Sum_probs=19.8
Q ss_pred eeEcCCCCccccc---CCCCCCCCCcee
Q 020564 203 GYTCPRCKARVCE---LPTDCRICGLQL 227 (324)
Q Consensus 203 Gy~Cp~C~s~~C~---lP~~C~~C~l~L 227 (324)
-|+|..|+..+-- -+..|+-||-.+
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCcEE
Confidence 7999999998752 357999999654
No 441
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=22.77 E-value=1.2e+02 Score=25.09 Aligned_cols=39 Identities=13% Similarity=0.283 Sum_probs=29.3
Q ss_pred CCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 88 GHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 88 ~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+|+|+|++.... +..++...++.+++.|+.|.+++...
T Consensus 4 m~kkv~ill~~g~--~~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 4 MSKSALVILAPGA--EEMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp CCCEEEEEECTTC--CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEECCCc--hHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3578999987332 34455567889999999999999965
No 442
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=22.75 E-value=35 Score=32.12 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=28.6
Q ss_pred ceeecCCcc--c--cCeeEcCCCCcccccC--CCCCCCCCceecCch
Q 020564 191 ICSCHKEVK--V--GVGYTCPRCKARVCEL--PTDCRICGLQLVSSP 231 (324)
Q Consensus 191 ~C~CH~~~~--~--~~Gy~Cp~C~s~~C~l--P~~C~~C~l~Lvs~~ 231 (324)
+=.|....+ . ..--.||-|+|+|..- -..|++|++.-|-.+
T Consensus 271 F~iCa~s~tPIY~g~~~v~Cp~cgA~y~~~~kG~lC~vC~l~~IG~~ 317 (325)
T 3mv2_A 271 FDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAP 317 (325)
T ss_dssp EEECTTTCCEEESSSCEEECTTTCCEEEGGGTTSBCSSSSCBBTTCC
T ss_pred ceeecCCcccccCCCCCccCCCCCCeechhhCCCCCCCCcCcccCCC
Confidence 445555444 2 2145899999999864 579999999877543
No 443
>1vsq_C Mannose-specific phosphotransferase enzyme IIB component; sugar transport, complex (transferase/phosphocarrier, cytoplasm, membrane; HET: NEP; NMR {Escherichia coli} PDB: 2jzn_C 2jzo_D 2jzh_A
Probab=22.75 E-value=99 Score=25.96 Aligned_cols=64 Identities=13% Similarity=0.314 Sum_probs=35.9
Q ss_pred HHHHhhhcCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 55 IKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 55 ~~~L~~~~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+.+.+...|.|-..---.++-|...++. +.+...++++|+.++ . .+..+.+.|+.+.-|.+|+
T Consensus 46 ~k~~lk~a~P~gvk~~i~sve~ai~~~~~-~~~~~~~v~ll~k~p-----~----d~~~lve~Gv~i~~iNvG~ 109 (165)
T 1vsq_C 46 RKTLLTQVAPPGVTAHVVDVAKMIRVYNN-PKYAGERVMLLFTNP-----T----DVERLVEGGVKITSVNVGG 109 (165)
T ss_dssp HHHHHHHTCCTTCEEEEECHHHHHHHHTC-GGGTTCEEEEEESSH-----H----HHHHHHHTTCCCSEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEEHHHHHHHHhc-cccCCcEEEEEECCH-----H----HHHHHHHcCCCCCEEEECC
Confidence 33343333455542111123344455655 224567899998744 2 3455577899888888874
No 444
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=22.73 E-value=72 Score=29.45 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=37.0
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch-----HHHHHHHHHhhCCee
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE-----MFICKHLCQDTGGSY 144 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae-----~~iLk~ia~~TgG~Y 144 (324)
++|+|+.|+.. |-||=.-++..|...|.+|.|+.++.+ ...-.++.+.+||..
T Consensus 133 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 133 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 190 (306)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEE
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCcc
Confidence 57998888553 467878899999999999999877632 112223444567653
No 445
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=22.70 E-value=17 Score=23.46 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=20.0
Q ss_pred eeeCCCCCcccccccchhhhhcCC
Q 020564 282 YVACPKCKKHFCLECDIYIHESLH 305 (324)
Q Consensus 282 ~~~C~~C~~~fC~dCd~fihe~lh 305 (324)
.|.|+.|+..|=..-++-.|...|
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~H 47 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLELR 47 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 599999999998888887777655
No 446
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=22.66 E-value=1.7e+02 Score=26.34 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=35.2
Q ss_pred CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeEE
Q 020564 103 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSV 146 (324)
Q Consensus 103 d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~v 146 (324)
.+.++.+.++.+++.+|++=++--.....+.+.|++.||....+
T Consensus 213 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~ 256 (286)
T 3gi1_A 213 SPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKT 256 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEE
Confidence 34588899999999999986665555568899999999987654
No 447
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.56 E-value=39 Score=20.36 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=15.7
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 020564 216 LPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars 236 (324)
-|-.|+.|+..+....+|.+-
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H 31 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEH 31 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHH
Confidence 355678888888888888654
No 448
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.54 E-value=1.1e+02 Score=26.02 Aligned_cols=58 Identities=14% Similarity=0.058 Sum_probs=45.4
Q ss_pred cccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCee--EEeCCHHHHHHHHHhcC
Q 020564 104 PGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSY--SVALDESHFKELIMEHA 161 (324)
Q Consensus 104 ~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y--~va~d~~hl~~lL~~~~ 161 (324)
..|++.++..|++.+=+|=+|++..-..-++.+++..|=.. +...+++..++.+.+..
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~ 139 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVK 139 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHH
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHH
Confidence 45889999999999999999999887777788888888433 55667777777666554
No 449
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=22.48 E-value=1.8e+02 Score=24.57 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=46.0
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHHhh---C-Cee-EEeCCHHHHHHHHHhcCC
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQDT---G-GSY-SVALDESHFKELIMEHAP 162 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~~T---g-G~Y-~va~d~~hl~~lL~~~~~ 162 (324)
.+|.|++||.+ |-.-..++.+.|++.||..++=-.++. ..-+.+.++.- | ..+ -++--+.||--.+...++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t~ 83 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTT 83 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTCS
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhccC
Confidence 47999998763 333334789999999999887666654 12222332221 1 233 345567788877777775
Q ss_pred CCc
Q 020564 163 PPP 165 (324)
Q Consensus 163 pp~ 165 (324)
-|.
T Consensus 84 ~PV 86 (166)
T 3oow_A 84 LPV 86 (166)
T ss_dssp SCE
T ss_pred CCE
Confidence 553
No 450
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=22.34 E-value=74 Score=25.80 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=26.4
Q ss_pred eEEEEEeCCCCCCcccHHH-HHHHHHhcCcEEEEEEccc
Q 020564 91 EVLILYSALSTCDPGDIME-TIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~~-ti~~akk~~IrV~vI~Lga 128 (324)
+|+|+++|.+. +...+-+ .++.+++.++.|.++.+..
T Consensus 2 kv~IvY~S~tG-nT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 2 SVLIGYLSDYG-YSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp CEEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred EEEEEEECCCh-HHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 48899998853 3334444 4667788899999998863
No 451
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=22.07 E-value=42 Score=24.67 Aligned_cols=26 Identities=19% Similarity=0.546 Sum_probs=18.1
Q ss_pred eeEcCCCCcccccCC----CCCCCCCceec
Q 020564 203 GYTCPRCKARVCELP----TDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP----~~C~~C~l~Lv 228 (324)
-|.||.|+..-=+-. =.|.-|+.++-
T Consensus 26 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCSSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCCCCCCceeEecCCCeEECCCCCCEEe
Confidence 699999987633322 27999987753
No 452
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=21.98 E-value=1.2e+02 Score=27.59 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=27.8
Q ss_pred eEEEEEeCCCCC-CcccHH-HHHHHHHhcCcEEEEEEccc
Q 020564 91 EVLILYSALSTC-DPGDIM-ETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 91 eILil~gS~~t~-d~g~i~-~ti~~akk~~IrV~vI~Lga 128 (324)
+||||++++... -...+. .+++.+++.|..|.++-|.+
T Consensus 24 KiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 24 KVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 699999998531 011233 46888999999999999864
No 453
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=21.97 E-value=77 Score=26.93 Aligned_cols=39 Identities=15% Similarity=0.337 Sum_probs=26.9
Q ss_pred CceEEEEEeCCCCCCcc-cHHHHHHHHHhcCcEEEEEEcc
Q 020564 89 HREVLILYSALSTCDPG-DIMETIQKCKESKIRCSVIGLS 127 (324)
Q Consensus 89 ~reILil~gS~~t~d~g-~i~~ti~~akk~~IrV~vI~Lg 127 (324)
.|.|+||.||+...... .+.+.+..+.+.++.+.+|-|.
T Consensus 2 ~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~ 41 (190)
T 3u7r_A 2 VKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIG 41 (190)
T ss_dssp CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGG
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecc
Confidence 46799999998742111 2335556666679999999885
No 454
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.79 E-value=33 Score=20.96 Aligned_cols=20 Identities=25% Similarity=0.517 Sum_probs=14.8
Q ss_pred CCCCCCCCceecCchhHHhh
Q 020564 217 PTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 217 P~~C~~C~l~Lvs~~hLars 236 (324)
|-.|+.|+..+....+|.+-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIH 31 (46)
T ss_dssp CEECSSSCCEESSHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHH
Confidence 44566788888888888764
No 455
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=21.61 E-value=1.4e+02 Score=27.46 Aligned_cols=43 Identities=16% Similarity=0.232 Sum_probs=35.0
Q ss_pred CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeE
Q 020564 103 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYS 145 (324)
Q Consensus 103 d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~ 145 (324)
.+.++.+.++.+|+.+|++=+.--.....+.+.|++.||....
T Consensus 238 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~iA~e~g~~v~ 280 (321)
T 1xvl_A 238 TPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFG 280 (321)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCChHHHHHHHHhcCCcee
Confidence 4458889999999999998666555556899999999998764
No 456
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=21.51 E-value=48 Score=31.25 Aligned_cols=42 Identities=29% Similarity=0.618 Sum_probs=30.2
Q ss_pred CCccccccccccCCCCCCCceeeCCCCCcc-cccccchhhhhcCCCCCCCCCCCC
Q 020564 262 RSTCFGCQQSLLSSGNKPGLYVACPKCKKH-FCLECDIYIHESLHNCPGCESLRH 315 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~-fC~dCd~fihe~lh~CpgC~~~~~ 315 (324)
...|.-|...+.++ .+ -.|++. ||.+|-.- +..||-|-....
T Consensus 295 ~~~C~IC~~~~~~~------v~--lpCgH~~fC~~C~~~----~~~CP~CR~~i~ 337 (345)
T 3t6p_A 295 ERTCKVCMDKEVSV------VF--IPCGHLVVCQECAPS----LRKCPICRGIIK 337 (345)
T ss_dssp TCBCTTTSSSBCCE------EE--ETTCCEEECTTTGGG----CSBCTTTCCBCC
T ss_pred CCCCCccCCcCCce------EE--cCCCChhHhHHHHhc----CCcCCCCCCCcc
Confidence 45799998666432 22 269999 99999763 489999976443
No 457
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=21.46 E-value=1.6e+02 Score=26.95 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=31.3
Q ss_pred cHHHHHHHHHhcCcEEEEEEccc----hHHHHHHHHHhhCCeeEE
Q 020564 106 DIMETIQKCKESKIRCSVIGLSA----EMFICKHLCQDTGGSYSV 146 (324)
Q Consensus 106 ~i~~ti~~akk~~IrV~vI~Lga----e~~iLk~ia~~TgG~Y~v 146 (324)
...++++.|+++||.|.+|.+.. +...+++.++.|+....+
T Consensus 215 ~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvv 259 (324)
T 1w85_B 215 ESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVV 259 (324)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSEEESCCHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeeeecCCCHHHHHHHHhhCCcEEEE
Confidence 34578889999999999999964 345678888888865544
No 458
>1nrz_A PTS system, sorbose-specific IIB component; beta sheet core, flanking helices, right handed beta-alpha-B crossover, transferase; 1.75A {Klebsiella pneumoniae} SCOP: c.38.1.1
Probab=21.46 E-value=1e+02 Score=25.85 Aligned_cols=64 Identities=9% Similarity=0.181 Sum_probs=36.1
Q ss_pred HHHHhhhcCCCCcchHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 55 IKALMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 55 ~~~L~~~~~~~G~~sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
.+.+.+...|.|-..---.++-|...++.- .+...++++++.++ . .+..+.+.|+.+.-|.+|+
T Consensus 43 ~k~~lk~a~P~gvk~~i~sve~ai~~~~~~-~~~~~~v~ll~k~p-----~----d~~~lve~Gv~i~~iNvG~ 106 (164)
T 1nrz_A 43 RRTLLRQAAPPGMKVNVVSLEKAVAVYHNP-QYQDETVFYLFTNP-----H----DVLTMVRQGVQIATLNIGG 106 (164)
T ss_dssp HHHHHHHTCCTTCEEEEECHHHHHHHHTCG-GGTTCEEEEEESSH-----H----HHHHHHTTTCCCSEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEEHHHHHHHHhcc-cCCCceEEEEECCH-----H----HHHHHHHcCCCCCEEEECC
Confidence 344433334555321111233444556552 24567899998744 2 3455578899888888874
No 459
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=21.37 E-value=18 Score=32.51 Aligned_cols=31 Identities=26% Similarity=0.579 Sum_probs=20.0
Q ss_pred CCccccccccccCCC----CCCCceeeCCCCCccc
Q 020564 262 RSTCFGCQQSLLSSG----NKPGLYVACPKCKKHF 292 (324)
Q Consensus 262 ~~~C~~C~~~~~~~~----~~~~~~~~C~~C~~~f 292 (324)
.+.|.||...+|... ......+.||.|+.+.
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 468999998887431 0012247788888753
No 460
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=21.30 E-value=2.2e+02 Score=21.23 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=36.5
Q ss_pred eEEEEEeCCCCCCcccHH--HHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCC
Q 020564 91 EVLILYSALSTCDPGDIM--ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGG 142 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~--~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG 142 (324)
+|+|+..+.. ..|+--+ ++.+.|.+.||....+-+..+..+.+++.+.||.
T Consensus 19 ~Vvvy~k~t~-~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~ 71 (109)
T 3ipz_A 19 KVVLFMKGTR-DFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNW 71 (109)
T ss_dssp SEEEEESBCS-SSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred CEEEEEecCC-CCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCC
Confidence 4676654321 1244333 7888999999999999998777777888888873
No 461
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=21.14 E-value=32 Score=23.65 Aligned_cols=26 Identities=23% Similarity=0.586 Sum_probs=22.1
Q ss_pred eeEcCCCCcccccCCCCCCCCCceec
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~Lv 228 (324)
++.||.|....=..-..|.+|++..-
T Consensus 10 ~W~Cp~CTf~N~p~~~~CemC~~prp 35 (52)
T 2crc_A 10 GWQCPGCTFINKPTRPGCEMCCRARP 35 (52)
T ss_dssp SBCCTTTCCCBCTTCSSCSSSCCCCC
T ss_pred CccCCCcccccCCCCCeeCCCCCcCC
Confidence 78999999887666789999999854
No 462
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.09 E-value=1.9e+02 Score=24.51 Aligned_cols=74 Identities=22% Similarity=0.156 Sum_probs=46.4
Q ss_pred ceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccch--HHHHHHHHH---hhC-Cee-EEeCCHHHHHHHHHhcCC
Q 020564 90 REVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAE--MFICKHLCQ---DTG-GSY-SVALDESHFKELIMEHAP 162 (324)
Q Consensus 90 reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae--~~iLk~ia~---~Tg-G~Y-~va~d~~hl~~lL~~~~~ 162 (324)
.+|.|++||.+ |-.-..++.+.|++.||..++--.++. ..-+.++++ ..| ..+ -++--+.||--.+...++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~ 84 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTL 84 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCS
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCC
Confidence 46999998763 333334789999999999887666654 222333322 122 133 445567788888887775
Q ss_pred CCc
Q 020564 163 PPP 165 (324)
Q Consensus 163 pp~ 165 (324)
-|.
T Consensus 85 ~PV 87 (169)
T 3trh_A 85 KPV 87 (169)
T ss_dssp SCE
T ss_pred CCE
Confidence 554
No 463
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=21.06 E-value=3.7e+02 Score=26.61 Aligned_cols=88 Identities=13% Similarity=0.188 Sum_probs=54.8
Q ss_pred CcHHHHHHHHHHHHHHHHhcCCcCCceEEEEeeCCeeeEeecCCCCHHHHHHHHhhhcCCCCcchHHHHHHHHHHHhhCC
Q 020564 5 PSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSLQNALDLVQGLLSQI 84 (324)
Q Consensus 5 P~Rl~~~~~~l~~Fv~~~f~qNP~sqlGiI~~~~g~a~~l~~lt~n~~~~~~~L~~~~~~~G~~sL~naL~~A~~~L~~~ 84 (324)
+++.+.+.+.+..++++|+..+...++ ||++.+|. ++++..+ +|...|.
T Consensus 303 ~~~~~~~~~~~~~~l~~~~~~~g~~~v-vvglSGGv--------------------------DSsv~a~--la~~alG-- 351 (590)
T 3n05_A 303 LDADEEVYSALVVGLRAYVAKNGFRSV-LIGLSGGI--------------------------DSALVAA--IACDALG-- 351 (590)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTCCCE-EEECCSSH--------------------------HHHHHHH--HHHHHHC--
T ss_pred CCcHHHHHHHHHHHHHHHHHHhCCCcE-EEEcCCCH--------------------------HHHHHHH--HHHHHhC--
Confidence 478889999999999999887765543 33443332 1223222 2333332
Q ss_pred CCCCCceEEEEE-eCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 85 PSYGHREVLILY-SALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 85 p~~~~reILil~-gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
..+|+.++ .+.. ....++.++.+.+++.||+..+|.+..
T Consensus 352 ----~~~v~~v~m~~~~-~~~~~~~~A~~la~~lgi~~~~i~i~~ 391 (590)
T 3n05_A 352 ----AQNVYGVSMPSKY-SSDHSKGDAAELARRTGLNFRTVSIEP 391 (590)
T ss_dssp ----GGGEEEEECCCSS-CCHHHHHHHHHHHHHHTCEEEECCSHH
T ss_pred ----cccEEEEEECCCC-CCHHHHHHHHHHHHHcCCcEEEEEChH
Confidence 13455554 3322 235577788889999999999998864
No 464
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=21.06 E-value=2.8e+02 Score=22.21 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=41.5
Q ss_pred CCCcchHHHHHHHHHHHhhCCCCCCCceE-EEEEeCCCC----------CCcccHHHHHHHH-HhcCcEEEEEEccch
Q 020564 64 CSGDSSLQNALDLVQGLLSQIPSYGHREV-LILYSALST----------CDPGDIMETIQKC-KESKIRCSVIGLSAE 129 (324)
Q Consensus 64 ~~G~~sL~naL~~A~~~L~~~p~~~~reI-Lil~gS~~t----------~d~g~i~~ti~~a-kk~~IrV~vI~Lgae 129 (324)
|-|...-.+||.+|...+..- .+| =||+-.+.. .|..|+.+..+.+ ++.+|+++++.-++.
T Consensus 23 Pyg~~~a~~Al~~A~aala~g-----~eV~~VFf~~DGV~~a~~~q~p~~~~~~l~~~~~~La~~~gv~l~vC~~~a~ 95 (140)
T 2d1p_A 23 AYGTQQASSAFQFAQALIADG-----HELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAAL 95 (140)
T ss_dssp SSSSSHHHHHHHHHHHHHHTT-----CEEEEEEECGGGGGGGBTTCCCCTTSCCHHHHHHHHHHHHCCEEEEEHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHCC-----CccCEEEEechHHHHHhcCCCCccccCChHHHHHHHHHHcCCEEEEeHHHHH
Confidence 567788899999999999862 256 444421111 1223667777777 899999999987544
No 465
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=21.00 E-value=2.1e+02 Score=20.98 Aligned_cols=51 Identities=6% Similarity=0.080 Sum_probs=34.0
Q ss_pred eEEEEEe-CCCCCCcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhC
Q 020564 91 EVLILYS-ALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTG 141 (324)
Q Consensus 91 eILil~g-S~~t~d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~Tg 141 (324)
+|+|+.. ++....-+.-..+...+++.+|....|-+..+..+.+++.+.+|
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g 69 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSN 69 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGGCHHHHHHHHHHHT
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHHHC
Confidence 4776653 22111122344678888899999999999877677777777776
No 466
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=21.00 E-value=73 Score=26.12 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=26.3
Q ss_pred eEEEEEeCCCCCCcccHHH-HHHHHHh-cCcEEEEEEccch
Q 020564 91 EVLILYSALSTCDPGDIME-TIQKCKE-SKIRCSVIGLSAE 129 (324)
Q Consensus 91 eILil~gS~~t~d~g~i~~-ti~~akk-~~IrV~vI~Lgae 129 (324)
+|+||++|... +...+-+ .++.+++ .++.|.++-+...
T Consensus 3 kilii~~S~~g-~t~~la~~i~~~l~~~~g~~v~~~~l~~~ 42 (198)
T 3b6i_A 3 KVLVLYYSMYG-HIETMARAVAEGASKVDGAEVVVKRVPET 42 (198)
T ss_dssp EEEEEECCSSS-HHHHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred eEEEEEeCCCc-HHHHHHHHHHHHHhhcCCCEEEEEEcccc
Confidence 69999999532 2233444 4666776 8999999999753
No 467
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=20.92 E-value=39 Score=30.84 Aligned_cols=47 Identities=23% Similarity=0.552 Sum_probs=33.4
Q ss_pred CccccccccccCCC-----CCCCceeeCCCCCcccccccchhhhhcCCCCCCCCC
Q 020564 263 STCFGCQQSLLSSG-----NKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCES 312 (324)
Q Consensus 263 ~~C~~C~~~~~~~~-----~~~~~~~~C~~C~~~fC~dCd~fihe~lh~CpgC~~ 312 (324)
..|..|...+|... .......+|.-|+..|| .+|.+..-..|.||.+
T Consensus 80 ~~C~~C~~~MP~R~~~~~~~~~~~pq~C~iC~r~FC---~lYw~c~~~~c~g~L~ 131 (261)
T 2xoc_A 80 ALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFC---HLYWGCTRTGCYGCLA 131 (261)
T ss_dssp EECTTTCCEEECCHHHHHTCTTSCCCBCTTTCCBCC---HHHHCCCCTTCSCSEE
T ss_pred cCcCcccCcCCCCCccccccCCCCCCCCCCcCcccc---CcccccCCCCCccccc
Confidence 36999998888731 11123568999999997 5677666677878864
No 468
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=20.88 E-value=74 Score=19.30 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=19.8
Q ss_pred eeEcCCCCcccccCCCCCCCCCce
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQ 226 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~ 226 (324)
.+.||.|+...=.--..|-.|+..
T Consensus 5 DW~C~~C~~~Nfa~r~~C~~C~~p 28 (32)
T 2lk0_A 5 DWLCNKCCLNNFRKRLKCFRCGAD 28 (32)
T ss_dssp EEECTTTCCEEETTCCBCTTTCCB
T ss_pred CCCcCcCcCCcChhcceecCCCCc
Confidence 789999998877777888888864
No 469
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.78 E-value=70 Score=21.86 Aligned_cols=27 Identities=19% Similarity=0.507 Sum_probs=23.8
Q ss_pred eeEcCCCCcccccCCCCCCCCCceecC
Q 020564 203 GYTCPRCKARVCELPTDCRICGLQLVS 229 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP~~C~~C~l~Lvs 229 (324)
++.||.|.-..=..-..|..|++.--.
T Consensus 11 ~W~C~~CT~~N~~~~~~C~~C~~pr~~ 37 (53)
T 2d9g_A 11 YWDCSVCTFRNSAEAFKCMMCDVRKGT 37 (53)
T ss_dssp CEECSSSCCEECSSCSSCSSSCCCCCC
T ss_pred CcCCCCCccCCCCCCCccCCCCCcCCc
Confidence 799999999988888999999998654
No 470
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=20.75 E-value=31 Score=27.70 Aligned_cols=26 Identities=23% Similarity=0.584 Sum_probs=18.0
Q ss_pred eeEcCCCCc----ccccCCCCCCCCCceec
Q 020564 203 GYTCPRCKA----RVCELPTDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s----~~C~lP~~C~~C~l~Lv 228 (324)
-|.||.|+. +...---.|+-|+.++.
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 89 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEEE
Confidence 799999987 22222246999998854
No 471
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=20.73 E-value=1.8e+02 Score=29.68 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHH--HHHHHHHhcCcEEEEEEccchH----H-----------
Q 020564 69 SLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIM--ETIQKCKESKIRCSVIGLSAEM----F----------- 131 (324)
Q Consensus 69 sL~naL~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~--~ti~~akk~~IrV~vI~Lgae~----~----------- 131 (324)
+|..|+-+|+. .| .++|++|.|.. +-.| +.+.++.+.++.|-+|-+.... .
T Consensus 518 ~lpaAiGaalA----~p---~~~Vv~i~GDG-----sf~~~~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~ 585 (677)
T 1t9b_A 518 GLPAAIGAQVA----KP---ESLVIDIDGDA-----SFNMTLTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRY 585 (677)
T ss_dssp HHHHHHHHHHH----CT---TSEEEEEEEHH-----HHHHHGGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHh----CC---CCeEEEEEeeh-----HHhccHHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCCc
Confidence 45555555554 22 46788888833 2112 3467777888887777775431 1
Q ss_pred --------HHHHHHHhhCCeeEEeCCHHHHHHHHHhcC
Q 020564 132 --------ICKHLCQDTGGSYSVALDESHFKELIMEHA 161 (324)
Q Consensus 132 --------iLk~ia~~TgG~Y~va~d~~hl~~lL~~~~ 161 (324)
=+.++++.-|..|..+.+.+.|++.|.+..
T Consensus 586 ~~~~~~~~d~~~la~a~G~~~~~v~~~~el~~al~~a~ 623 (677)
T 1t9b_A 586 SHTHQLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFV 623 (677)
T ss_dssp CSCCCCCCCHHHHHHHTTCEEEEECSHHHHHHHHHHHH
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEECCHHHHHHHHHHHH
Confidence 156788888999988999999998887654
No 472
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=20.73 E-value=1.5e+02 Score=26.85 Aligned_cols=43 Identities=21% Similarity=0.181 Sum_probs=33.9
Q ss_pred CcccHHHHHHHHHhcCcEEEEEEccchHHHHHHHHHhhCCeeE
Q 020564 103 DPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYS 145 (324)
Q Consensus 103 d~g~i~~ti~~akk~~IrV~vI~Lgae~~iLk~ia~~TgG~Y~ 145 (324)
.+.++.+.++.+++.+|++=++-=.....+.+.||+.||..-.
T Consensus 217 s~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 217 TPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp CHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHhCCcEE
Confidence 3458889999999999987655444445789999999998764
No 473
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=20.69 E-value=28 Score=26.20 Aligned_cols=26 Identities=19% Similarity=0.634 Sum_probs=17.5
Q ss_pred eeEcCCCCcccccCC----CCCCCCCceec
Q 020564 203 GYTCPRCKARVCELP----TDCRICGLQLV 228 (324)
Q Consensus 203 Gy~Cp~C~s~~C~lP----~~C~~C~l~Lv 228 (324)
-|.||.|+...=.-| -.|+-||.++.
T Consensus 27 ~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQGTGIWQCSYCDYKFT 56 (83)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEEE
T ss_pred cCcCCCCCCcceeccCCCeEECCCCCCEec
Confidence 689999987332222 36888988754
No 474
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.59 E-value=46 Score=20.25 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=15.9
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 020564 216 LPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars 236 (324)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVH 31 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHH
T ss_pred CCEECCccCcccCCHHHHHHH
Confidence 345677888898888888753
No 475
>3eye_A PTS system N-acetylgalactosamine-specific IIB component 1; structural genomics, phosphotransferase, PSI-2, protein structure initiative; 1.45A {Escherichia coli O157} SCOP: c.38.1.0
Probab=20.36 E-value=1.6e+02 Score=24.81 Aligned_cols=43 Identities=12% Similarity=0.274 Sum_probs=28.9
Q ss_pred HHHHHHhhCCCCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 75 DLVQGLLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 75 ~~A~~~L~~~p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
+-|...++.. . ...+|++|+.++ . .+..+.+.|+.+..|.+|.
T Consensus 69 e~ai~~~~~~-~-~~~~v~il~k~p-----~----d~~~lve~Gv~i~~vNvG~ 111 (168)
T 3eye_A 69 EKTINVIGKA-A-PHQKIFLICRTP-----Q----TVRKLVEGGIDLKDVNVGN 111 (168)
T ss_dssp HHHHHHGGGC-C-TTCCEEEEESSH-----H----HHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHhcc-c-CCceEEEEECCH-----H----HHHHHHHcCCCCCEEEECC
Confidence 3455556543 2 556799998744 2 3456678899999999985
No 476
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=20.34 E-value=1.3e+02 Score=21.26 Aligned_cols=49 Identities=16% Similarity=0.384 Sum_probs=33.3
Q ss_pred CCCccccccccccCCCCCCCceeeCCCCCcccccccch----hhhhcCCCCCCCCCCCCCC
Q 020564 261 SRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDI----YIHESLHNCPGCESLRHSN 317 (324)
Q Consensus 261 ~~~~C~~C~~~~~~~~~~~~~~~~C~~C~~~fC~dCd~----fihe~lh~CpgC~~~~~~~ 317 (324)
....|..|. +.+ ....|..|...|=.+|-. -+=+.--.||.|.....+.
T Consensus 11 ~~~~C~vC~----~~~----~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p~ 63 (66)
T 2lri_C 11 PGARCGVCG----DGT----DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVTPA 63 (66)
T ss_dssp TTCCCTTTS----CCT----TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCCCC
T ss_pred CCCCcCCCC----CCC----eEEECCCCCCceecccCCCccCcCCCCCEECccccCCCccC
Confidence 455799997 221 246799999999999942 2224456899998765543
No 477
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=20.27 E-value=32 Score=29.22 Aligned_cols=26 Identities=23% Similarity=0.694 Sum_probs=18.0
Q ss_pred cccc--ccccccCCCCCCCceeeCCCCCccc
Q 020564 264 TCFG--CQQSLLSSGNKPGLYVACPKCKKHF 292 (324)
Q Consensus 264 ~C~~--C~~~~~~~~~~~~~~~~C~~C~~~f 292 (324)
.|.. |++.+... ..+.|+|++|+..+
T Consensus 45 aC~~~~CnKKv~~~---~~g~~~CekC~~~~ 72 (181)
T 1l1o_C 45 ACPTQDCNKKVIDQ---QNGLYRCEKCDTEF 72 (181)
T ss_dssp BCCSTTCCCBCEEE---TTTEEEETTTTEEE
T ss_pred CCCchhcCCccccC---CCCeEECCCCCCcC
Confidence 5777 99877542 23479999998653
No 478
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=20.26 E-value=1.3e+02 Score=22.21 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=29.8
Q ss_pred ceEEEEEeCCCCCCccc---HHHHHHHHHhcCcEEEEEEccchHH
Q 020564 90 REVLILYSALSTCDPGD---IMETIQKCKESKIRCSVIGLSAEMF 131 (324)
Q Consensus 90 reILil~gS~~t~d~g~---i~~ti~~akk~~IrV~vI~Lgae~~ 131 (324)
+.|++=++.....|..- +....+.+++.|+++.++++..++.
T Consensus 44 ~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v~ 88 (116)
T 1th8_B 44 RHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSPAVK 88 (116)
T ss_dssp CEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEESCCHHHH
T ss_pred cEEEEECCCCcEEccHHHHHHHHHHHHHHHhCCeEEEEeCCHHHH
Confidence 45555566555556654 3367888999999999999976653
No 479
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=20.22 E-value=1.3e+02 Score=25.37 Aligned_cols=42 Identities=5% Similarity=0.063 Sum_probs=29.1
Q ss_pred CCCCCceEEEEEeCCCCCCcccHHHHHHHHHhcCcEEEEEEccc
Q 020564 85 PSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSA 128 (324)
Q Consensus 85 p~~~~reILil~gS~~t~d~g~i~~ti~~akk~~IrV~vI~Lga 128 (324)
++...++|.|++.... +..++...++.+++.|+.|.+++..+
T Consensus 5 ~~~m~~~v~ill~~g~--~~~e~~~~~~~l~~ag~~v~~vs~~g 46 (208)
T 3ot1_A 5 EQGMSKRILVPVAHGS--EEMETVIIVDTLVRAGFQVTMAAVGD 46 (208)
T ss_dssp ----CCEEEEEECTTC--CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccccCCeEEEEECCCC--cHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 3344678999887432 34455667889999999999999964
No 480
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=20.14 E-value=68 Score=30.25 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=24.6
Q ss_pred HHHHHHHhcCcEEEEEEccchH--HHHHHHHHhhCCee
Q 020564 109 ETIQKCKESKIRCSVIGLSAEM--FICKHLCQDTGGSY 144 (324)
Q Consensus 109 ~ti~~akk~~IrV~vI~Lgae~--~iLk~ia~~TgG~Y 144 (324)
+++..++++||+ |.++ ++|+++.+.|+|.-
T Consensus 277 ~Al~eA~~~gI~------Gk~vTPfLL~~i~elT~G~S 308 (335)
T 4gim_A 277 QAVAEAEAQGVI------GKESTPFLLARVAELTGGDS 308 (335)
T ss_dssp HHHHHHHHHTCC------GGGHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHcCCc------CCccChHHHHHHHHHhCCcc
Confidence 577888889985 5554 89999999999964
No 481
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=20.10 E-value=62 Score=22.05 Aligned_cols=20 Identities=30% Similarity=0.674 Sum_probs=13.4
Q ss_pred CCCCCCC--CCceecCchhHHh
Q 020564 216 LPTDCRI--CGLQLVSSPHLAR 235 (324)
Q Consensus 216 lP~~C~~--C~l~Lvs~~hLar 235 (324)
-|-.|+. |+..+.+...|.+
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~ 51 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKR 51 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHH
T ss_pred CCeeCCCCCCcCccCCHHHHHH
Confidence 4456766 7777777776654
No 482
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.09 E-value=48 Score=20.16 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=15.9
Q ss_pred CCCCCCCCCceecCchhHHhh
Q 020564 216 LPTDCRICGLQLVSSPHLARS 236 (324)
Q Consensus 216 lP~~C~~C~l~Lvs~~hLars 236 (324)
-|-.|+.|+..+....+|.+-
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2emz_A 11 RPFKCNECGKGFGRRSHLAGH 31 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHH
Confidence 355778888988888888753
No 483
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=20.02 E-value=98 Score=27.32 Aligned_cols=40 Identities=10% Similarity=0.266 Sum_probs=28.0
Q ss_pred ceEEEEEeCCCC-----CCc-c----cHHHHHHHHHhcCcEEEEEEccch
Q 020564 90 REVLILYSALST-----CDP-G----DIMETIQKCKESKIRCSVIGLSAE 129 (324)
Q Consensus 90 reILil~gS~~t-----~d~-g----~i~~ti~~akk~~IrV~vI~Lgae 129 (324)
++|||+++|-.. -.+ | ++....+.+++.|+.|++++..+.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 579999986311 111 2 334568999999999999998644
Done!