Query 020569
Match_columns 324
No_of_seqs 273 out of 1770
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 04:58:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 3.8E-18 1.3E-22 132.4 6.0 77 210-314 13-89 (91)
2 1x4j_A Ring finger protein 38; 99.7 5.4E-18 1.8E-22 126.5 3.1 53 264-316 22-74 (75)
3 2kiz_A E3 ubiquitin-protein li 99.6 7.5E-16 2.6E-20 112.8 6.7 56 262-317 11-66 (69)
4 1iym_A EL5; ring-H2 finger, ub 99.6 3.3E-16 1.1E-20 109.5 4.2 50 264-313 4-54 (55)
5 2ep4_A Ring finger protein 24; 99.6 8.4E-16 2.9E-20 114.0 6.6 56 263-318 13-68 (74)
6 2ect_A Ring finger protein 126 99.6 1.2E-15 4E-20 114.4 6.2 58 262-319 12-69 (78)
7 2ecl_A Ring-box protein 2; RNF 99.5 2.6E-15 8.7E-20 113.9 4.5 52 264-315 14-77 (81)
8 2ecm_A Ring finger and CHY zin 99.5 1E-14 3.5E-19 101.7 5.0 50 264-313 4-54 (55)
9 1v87_A Deltex protein 2; ring- 99.5 1.2E-14 4.2E-19 116.7 5.7 57 264-320 24-100 (114)
10 2d8s_A Cellular modulator of i 99.5 1.6E-14 5.5E-19 109.4 5.2 55 261-316 11-72 (80)
11 2ea6_A Ring finger protein 4; 99.5 2.8E-14 9.7E-19 103.8 5.3 53 262-314 12-68 (69)
12 3dpl_R Ring-box protein 1; ubi 99.5 2.4E-14 8.2E-19 114.1 4.9 51 263-313 35-100 (106)
13 3ng2_A RNF4, snurf, ring finge 99.5 2.5E-14 8.7E-19 104.9 3.5 55 263-317 8-66 (71)
14 2xeu_A Ring finger protein 4; 99.4 3.4E-14 1.1E-18 101.9 3.4 53 264-316 2-58 (64)
15 2ecn_A Ring finger protein 141 99.4 9.2E-14 3.1E-18 101.8 3.7 51 263-317 13-63 (70)
16 1chc_A Equine herpes virus-1 r 99.4 1.3E-13 4.5E-18 100.3 4.2 50 263-314 3-52 (68)
17 2djb_A Polycomb group ring fin 99.4 6.3E-13 2.2E-17 98.0 6.7 55 263-319 13-67 (72)
18 2d8t_A Dactylidin, ring finger 99.4 2.1E-13 7.2E-18 100.4 4.1 50 263-315 13-62 (71)
19 2ct2_A Tripartite motif protei 99.4 9.9E-13 3.4E-17 100.2 6.8 54 263-316 13-70 (88)
20 4a0k_B E3 ubiquitin-protein li 99.4 7.9E-14 2.7E-18 112.9 0.6 52 263-314 46-112 (117)
21 2yur_A Retinoblastoma-binding 99.3 1E-12 3.5E-17 97.5 6.3 54 262-318 12-68 (74)
22 2ysl_A Tripartite motif-contai 99.3 1.5E-12 5.3E-17 95.8 6.0 52 262-316 17-71 (73)
23 2csy_A Zinc finger protein 183 99.3 1.4E-12 4.7E-17 98.3 5.3 48 263-313 13-60 (81)
24 2ecy_A TNF receptor-associated 99.3 2.6E-12 8.8E-17 93.0 5.1 50 263-315 13-63 (66)
25 2ct0_A Non-SMC element 1 homol 99.3 5.4E-12 1.8E-16 93.8 5.4 55 261-317 11-67 (74)
26 2ysj_A Tripartite motif-contai 99.2 1.3E-11 4.3E-16 88.5 6.6 44 262-308 17-63 (63)
27 4ayc_A E3 ubiquitin-protein li 99.2 1.9E-12 6.5E-17 107.6 2.6 48 265-315 53-100 (138)
28 4ap4_A E3 ubiquitin ligase RNF 99.2 2.9E-12 9.9E-17 104.6 3.5 55 263-317 5-63 (133)
29 2ecw_A Tripartite motif-contai 99.2 1.8E-11 6E-16 92.3 6.8 51 263-316 17-73 (85)
30 2ecv_A Tripartite motif-contai 99.2 1.8E-11 6.3E-16 92.2 6.3 51 263-316 17-73 (85)
31 2ecj_A Tripartite motif-contai 99.2 1.4E-11 4.9E-16 86.4 4.3 43 263-308 13-58 (58)
32 1g25_A CDK-activating kinase a 99.2 1.2E-11 4.2E-16 89.1 4.1 54 264-317 2-58 (65)
33 4ap4_A E3 ubiquitin ligase RNF 99.2 8.2E-12 2.8E-16 101.9 3.4 55 262-316 69-127 (133)
34 3lrq_A E3 ubiquitin-protein li 99.2 5.6E-12 1.9E-16 99.1 2.1 49 264-315 21-71 (100)
35 2egp_A Tripartite motif-contai 99.2 5.7E-12 2E-16 94.1 2.0 50 263-315 10-66 (79)
36 1t1h_A Gspef-atpub14, armadill 99.2 1.6E-11 5.5E-16 91.6 4.0 51 263-316 6-57 (78)
37 2y43_A E3 ubiquitin-protein li 99.1 9.9E-12 3.4E-16 97.2 2.4 49 264-315 21-70 (99)
38 2ckl_A Polycomb group ring fin 99.1 3.1E-11 1E-15 95.9 3.6 50 264-315 14-63 (108)
39 3ztg_A E3 ubiquitin-protein li 99.1 9.9E-11 3.4E-15 90.0 5.8 48 263-313 11-61 (92)
40 3fl2_A E3 ubiquitin-protein li 99.1 5.1E-11 1.8E-15 96.9 3.6 48 264-314 51-99 (124)
41 1jm7_A BRCA1, breast cancer ty 99.0 1.3E-10 4.4E-15 92.4 4.3 49 265-316 21-72 (112)
42 2ckl_B Ubiquitin ligase protei 99.0 1.3E-10 4.3E-15 99.3 3.9 49 264-314 53-102 (165)
43 3l11_A E3 ubiquitin-protein li 99.0 4.4E-11 1.5E-15 96.0 0.4 50 262-314 12-62 (115)
44 3hct_A TNF receptor-associated 99.0 1.5E-10 5.3E-15 93.4 3.6 50 263-315 16-66 (118)
45 1rmd_A RAG1; V(D)J recombinati 99.0 1.4E-10 4.8E-15 93.2 2.3 49 265-316 23-72 (116)
46 1z6u_A NP95-like ring finger p 99.0 2.2E-10 7.6E-15 96.6 3.0 48 265-315 78-126 (150)
47 1vyx_A ORF K3, K3RING; zinc-bi 98.9 4.7E-10 1.6E-14 80.0 3.9 48 263-313 4-58 (60)
48 2vje_A E3 ubiquitin-protein li 98.9 4.1E-10 1.4E-14 81.2 2.6 47 264-313 7-56 (64)
49 1e4u_A Transcriptional repress 98.9 1.1E-09 3.8E-14 82.2 4.6 54 263-317 9-65 (78)
50 1bor_A Transcription factor PM 98.9 3E-10 1E-14 79.6 1.2 49 263-317 4-52 (56)
51 2y1n_A E3 ubiquitin-protein li 98.8 1.2E-09 4.2E-14 104.8 4.4 48 265-315 332-380 (389)
52 3k1l_B Fancl; UBC, ring, RWD, 98.8 5.6E-10 1.9E-14 104.7 1.5 53 263-315 306-374 (381)
53 3knv_A TNF receptor-associated 98.8 1.3E-09 4.6E-14 90.8 3.0 49 263-314 29-78 (141)
54 1wgm_A Ubiquitin conjugation f 98.8 5.5E-09 1.9E-13 81.8 6.2 50 263-315 20-70 (98)
55 2kr4_A Ubiquitin conjugation f 98.8 3.4E-09 1.2E-13 80.7 4.8 50 263-315 12-61 (85)
56 2vje_B MDM4 protein; proto-onc 98.8 1.7E-09 5.9E-14 77.7 2.3 49 265-314 7-56 (63)
57 1jm7_B BARD1, BRCA1-associated 98.8 1.1E-09 3.8E-14 88.2 1.2 47 264-315 21-68 (117)
58 2kre_A Ubiquitin conjugation f 98.8 5.9E-09 2E-13 81.9 5.3 50 263-315 27-76 (100)
59 4ic3_A E3 ubiquitin-protein li 98.8 1.4E-09 4.8E-14 80.6 1.0 44 264-314 23-67 (74)
60 2ea5_A Cell growth regulator w 98.7 1.4E-08 4.8E-13 74.0 5.0 49 260-315 10-59 (68)
61 3hcs_A TNF receptor-associated 98.6 1.1E-08 3.6E-13 87.6 3.1 50 263-315 16-66 (170)
62 2yu4_A E3 SUMO-protein ligase 98.5 3E-08 1E-12 76.8 3.1 46 263-311 5-59 (94)
63 2ecg_A Baculoviral IAP repeat- 98.5 1.6E-08 5.3E-13 75.0 0.8 44 264-314 24-68 (75)
64 2c2l_A CHIP, carboxy terminus 98.5 6.1E-08 2.1E-12 88.4 4.7 50 263-315 206-256 (281)
65 1wim_A KIAA0161 protein; ring 98.5 5.6E-08 1.9E-12 75.0 3.0 48 264-311 4-61 (94)
66 2yho_A E3 ubiquitin-protein li 98.4 5.6E-08 1.9E-12 72.9 0.7 43 265-314 18-61 (79)
67 2f42_A STIP1 homology and U-bo 98.3 3.2E-07 1.1E-11 79.3 3.4 50 263-315 104-154 (179)
68 3t6p_A Baculoviral IAP repeat- 98.2 2.5E-07 8.7E-12 87.9 1.5 45 263-314 293-338 (345)
69 2bay_A PRE-mRNA splicing facto 98.2 3.9E-07 1.3E-11 64.9 2.0 48 266-316 4-52 (61)
70 3htk_C E3 SUMO-protein ligase 98.1 2.1E-06 7.2E-11 78.0 3.9 50 263-314 179-232 (267)
71 3vk6_A E3 ubiquitin-protein li 97.8 8.9E-06 3E-10 63.0 3.1 46 268-315 4-50 (101)
72 3nw0_A Non-structural maintena 97.6 2.6E-05 8.8E-10 70.3 3.8 52 264-317 179-232 (238)
73 2lri_C Autoimmune regulator; Z 94.8 0.024 8.3E-07 40.5 3.8 47 263-312 10-60 (66)
74 2ko5_A Ring finger protein Z; 94.6 0.0092 3.1E-07 45.4 1.1 47 264-315 27-74 (99)
75 2jun_A Midline-1; B-BOX, TRIM, 93.4 0.039 1.3E-06 42.2 2.6 36 264-299 2-38 (101)
76 2l43_A N-teminal domain from h 91.5 0.071 2.4E-06 40.2 1.8 54 261-314 21-78 (88)
77 2xb1_A Pygopus homolog 2, B-ce 90.0 0.046 1.6E-06 42.7 -0.6 51 266-316 4-66 (105)
78 1we9_A PHD finger family prote 88.8 0.15 5.3E-06 35.7 1.5 49 263-311 4-58 (64)
79 2l5u_A Chromodomain-helicase-D 87.9 0.32 1.1E-05 33.9 2.6 45 263-310 9-57 (61)
80 1fp0_A KAP-1 corepressor; PHD 87.0 0.35 1.2E-05 36.4 2.6 50 260-312 20-73 (88)
81 1f62_A Transcription factor WS 86.8 0.24 8.3E-06 33.0 1.5 45 266-310 1-49 (51)
82 1xwh_A Autoimmune regulator; P 86.5 0.17 5.9E-06 35.8 0.6 48 263-314 6-58 (66)
83 1wil_A KIAA1045 protein; ring 85.9 0.75 2.6E-05 34.2 3.8 32 263-298 13-47 (89)
84 3o36_A Transcription intermedi 84.7 0.22 7.6E-06 42.4 0.5 47 263-312 2-52 (184)
85 1mm2_A MI2-beta; PHD, zinc fin 84.4 0.24 8.2E-06 34.5 0.5 48 264-314 8-59 (61)
86 2ysm_A Myeloid/lymphoid or mix 84.2 0.32 1.1E-05 37.9 1.2 47 263-309 5-55 (111)
87 2e6r_A Jumonji/ARID domain-con 84.0 0.14 4.8E-06 38.9 -0.9 49 262-311 13-66 (92)
88 2puy_A PHD finger protein 21A; 83.3 0.14 4.8E-06 35.5 -1.1 49 264-315 4-56 (60)
89 2k16_A Transcription initiatio 82.9 0.36 1.2E-05 34.8 1.0 51 264-315 17-72 (75)
90 3lqh_A Histone-lysine N-methyl 81.5 0.59 2E-05 40.0 1.9 47 266-312 3-64 (183)
91 3u5n_A E3 ubiquitin-protein li 81.2 0.42 1.4E-05 41.5 0.9 45 264-312 6-55 (207)
92 2yql_A PHD finger protein 21A; 80.9 0.22 7.5E-06 34.0 -0.8 45 263-310 7-55 (56)
93 2e6s_A E3 ubiquitin-protein li 79.1 1.2 4.2E-05 32.5 2.7 43 267-310 28-76 (77)
94 2yt5_A Metal-response element- 77.5 0.97 3.3E-05 31.6 1.7 50 263-312 4-62 (66)
95 1wev_A Riken cDNA 1110020M19; 77.5 0.25 8.4E-06 37.2 -1.6 56 264-319 15-80 (88)
96 1wem_A Death associated transc 75.3 1.8 6.1E-05 31.2 2.7 48 266-313 16-72 (76)
97 3v43_A Histone acetyltransfera 75.3 0.86 3E-05 35.6 1.0 45 266-310 62-111 (112)
98 2kgg_A Histone demethylase jar 74.6 1.2 4.2E-05 29.7 1.5 43 267-309 4-52 (52)
99 2vpb_A Hpygo1, pygopus homolog 73.4 2.5 8.4E-05 29.7 2.9 35 263-297 6-42 (65)
100 3asl_A E3 ubiquitin-protein li 71.1 0.65 2.2E-05 33.2 -0.6 43 267-310 20-68 (70)
101 4gne_A Histone-lysine N-methyl 70.2 3.7 0.00013 31.9 3.5 48 263-316 13-67 (107)
102 2ku3_A Bromodomain-containing 69.7 3.9 0.00013 29.2 3.3 50 262-311 13-66 (71)
103 1weu_A Inhibitor of growth fam 68.4 7.2 0.00025 29.3 4.7 44 264-313 34-87 (91)
104 1wep_A PHF8; structural genomi 67.2 7.3 0.00025 28.1 4.5 47 266-312 12-64 (79)
105 2ri7_A Nucleosome-remodeling f 67.1 1.5 5.3E-05 36.6 0.8 47 264-311 7-59 (174)
106 2kwj_A Zinc finger protein DPF 67.0 0.45 1.5E-05 37.4 -2.4 48 267-314 60-111 (114)
107 3v43_A Histone acetyltransfera 66.7 6.3 0.00021 30.5 4.3 45 265-309 5-62 (112)
108 3ask_A E3 ubiquitin-protein li 63.7 1.6 5.6E-05 38.5 0.3 44 266-310 175-224 (226)
109 1wee_A PHD finger family prote 63.6 1.6 5.5E-05 31.2 0.2 47 264-311 15-66 (72)
110 1wen_A Inhibitor of growth fam 63.4 5.1 0.00017 28.6 2.9 41 266-312 16-66 (71)
111 3shb_A E3 ubiquitin-protein li 59.1 1.4 4.9E-05 32.1 -0.8 44 267-311 28-77 (77)
112 2lv9_A Histone-lysine N-methyl 58.9 3.6 0.00012 31.3 1.4 44 267-310 29-75 (98)
113 2kwj_A Zinc finger protein DPF 57.4 4.4 0.00015 31.5 1.8 44 266-309 2-59 (114)
114 3m62_A Ubiquitin conjugation f 56.9 6.2 0.00021 41.8 3.3 50 263-315 889-939 (968)
115 2lbm_A Transcriptional regulat 55.9 9.7 0.00033 31.0 3.7 45 263-310 61-116 (142)
116 2rsd_A E3 SUMO-protein ligase 54.5 1.4 4.8E-05 31.1 -1.4 44 266-310 10-64 (68)
117 3c6w_A P28ING5, inhibitor of g 52.9 2.8 9.4E-05 28.8 -0.1 41 266-310 9-57 (59)
118 2vnf_A ING 4, P29ING4, inhibit 51.0 2.9 0.0001 28.8 -0.2 39 266-310 10-58 (60)
119 3o70_A PHD finger protein 13; 49.2 3.8 0.00013 29.0 0.2 46 264-310 18-66 (68)
120 1weo_A Cellulose synthase, cat 48.5 42 0.0014 25.1 5.7 50 264-313 15-69 (93)
121 1wew_A DNA-binding family prot 48.3 9.8 0.00033 27.4 2.3 49 265-314 16-75 (78)
122 2cu8_A Cysteine-rich protein 2 47.6 18 0.0006 25.3 3.6 41 265-315 9-49 (76)
123 2ysm_A Myeloid/lymphoid or mix 45.8 4.3 0.00015 31.2 0.0 44 267-311 56-104 (111)
124 2pk7_A Uncharacterized protein 45.2 5.9 0.0002 28.2 0.6 21 295-315 1-21 (69)
125 2co8_A NEDD9 interacting prote 45.0 21 0.00072 25.5 3.7 43 264-316 14-56 (82)
126 1iml_A CRIP, cysteine rich int 43.2 12 0.00039 26.3 2.0 12 266-277 28-39 (76)
127 3kqi_A GRC5, PHD finger protei 42.2 8.6 0.00029 27.5 1.1 48 265-312 9-62 (75)
128 3ql9_A Transcriptional regulat 40.4 27 0.00092 27.9 3.9 45 263-311 55-111 (129)
129 2dar_A PDZ and LIM domain prot 40.1 38 0.0013 24.4 4.5 41 264-315 24-64 (90)
130 2jny_A Uncharacterized BCR; st 40.0 4.8 0.00016 28.5 -0.5 19 296-314 4-22 (67)
131 2dj7_A Actin-binding LIM prote 39.9 25 0.00087 25.0 3.4 40 264-313 14-53 (80)
132 3i2d_A E3 SUMO-protein ligase 39.7 20 0.00067 33.9 3.5 46 266-313 250-299 (371)
133 1x62_A C-terminal LIM domain p 39.4 26 0.00089 24.6 3.4 40 264-314 14-53 (79)
134 2g6q_A Inhibitor of growth pro 38.1 6.4 0.00022 27.2 -0.1 41 266-310 11-59 (62)
135 4fo9_A E3 SUMO-protein ligase 37.6 22 0.00075 33.4 3.4 47 266-314 216-266 (360)
136 2ks1_B Epidermal growth factor 37.2 39 0.0013 21.7 3.6 32 56-87 8-39 (44)
137 1wd2_A Ariadne-1 protein homol 37.0 11 0.00036 26.0 0.9 20 298-317 1-21 (60)
138 3mjh_B Early endosome antigen 36.9 3.6 0.00012 25.2 -1.4 16 265-280 5-20 (34)
139 1x4l_A Skeletal muscle LIM-pro 33.9 28 0.00095 23.8 2.8 40 266-314 6-47 (72)
140 2d8y_A Eplin protein; LIM doma 32.6 90 0.0031 22.3 5.6 41 265-315 15-55 (91)
141 2gmg_A Hypothetical protein PF 30.7 8.8 0.0003 29.6 -0.4 24 285-313 72-95 (105)
142 1z2q_A LM5-1; membrane protein 30.6 72 0.0025 23.0 4.7 51 264-314 20-79 (84)
143 1zbd_B Rabphilin-3A; G protein 30.4 27 0.00093 27.9 2.5 33 264-296 54-88 (134)
144 1x64_A Alpha-actinin-2 associa 29.3 82 0.0028 22.4 4.8 41 264-315 24-64 (89)
145 1g47_A Pinch protein; LIM doma 29.2 54 0.0018 22.5 3.7 42 265-315 11-52 (77)
146 2kpi_A Uncharacterized protein 29.2 6.1 0.00021 26.9 -1.4 19 296-314 4-22 (56)
147 1x61_A Thyroid receptor intera 28.9 59 0.002 22.0 3.8 39 266-313 6-44 (72)
148 2l2t_A Receptor tyrosine-prote 28.3 51 0.0017 21.2 3.0 17 71-87 22-38 (44)
149 2jvx_A NF-kappa-B essential mo 27.8 12 0.00041 21.8 -0.1 13 302-314 3-15 (28)
150 3f6q_B LIM and senescent cell 27.0 34 0.0012 23.1 2.2 41 266-315 12-52 (72)
151 2jr6_A UPF0434 protein NMA0874 26.3 7.1 0.00024 27.7 -1.6 20 296-315 2-21 (68)
152 1a7i_A QCRP2 (LIM1); LIM domai 26.2 19 0.00065 25.4 0.7 41 265-315 7-47 (81)
153 1z60_A TFIIH basal transcripti 26.2 26 0.00088 24.0 1.4 41 266-308 16-58 (59)
154 1x4i_A Inhibitor of growth pro 26.0 10 0.00034 26.9 -0.8 42 266-313 6-57 (70)
155 2d8x_A Protein pinch; LIM doma 25.6 35 0.0012 23.2 2.0 40 265-315 5-44 (70)
156 3o7a_A PHD finger protein 13 v 25.0 15 0.00052 24.1 -0.0 44 267-310 5-51 (52)
157 2hf1_A Tetraacyldisaccharide-1 24.8 6.8 0.00023 27.8 -1.9 17 298-314 4-20 (68)
158 1wyh_A SLIM 2, skeletal muscle 24.6 83 0.0028 21.2 3.9 41 266-315 6-46 (72)
159 2d8v_A Zinc finger FYVE domain 24.3 51 0.0017 23.2 2.6 31 263-297 6-37 (67)
160 1x63_A Skeletal muscle LIM-pro 23.7 77 0.0026 22.0 3.7 41 266-315 16-56 (82)
161 1x4u_A Zinc finger, FYVE domai 23.6 87 0.003 22.5 4.0 35 264-298 13-48 (84)
162 2js4_A UPF0434 protein BB2007; 23.6 7.1 0.00024 27.9 -2.0 16 298-313 4-19 (70)
163 2cor_A Pinch protein; LIM doma 23.6 70 0.0024 22.4 3.4 40 265-315 15-54 (79)
164 2d8z_A Four and A half LIM dom 23.3 88 0.003 20.9 3.8 38 266-314 6-43 (70)
165 1wfk_A Zinc finger, FYVE domai 23.2 56 0.0019 24.0 2.9 53 264-316 8-68 (88)
166 1x4k_A Skeletal muscle LIM-pro 22.7 68 0.0023 21.6 3.2 41 266-315 6-46 (72)
167 1vfy_A Phosphatidylinositol-3- 22.5 62 0.0021 22.7 2.9 33 265-297 11-44 (73)
168 1loi_A Cyclic 3',5'-AMP specif 22.1 26 0.00091 19.3 0.6 8 24-31 10-17 (26)
169 2o35_A Hypothetical protein DU 21.8 35 0.0012 26.0 1.4 12 289-300 42-53 (105)
170 3fyb_A Protein of unknown func 21.6 35 0.0012 25.9 1.4 12 289-300 41-52 (104)
171 3kv4_A PHD finger protein 8; e 21.6 19 0.00063 34.9 -0.2 47 266-312 5-57 (447)
172 1dvp_A HRS, hepatocyte growth 20.9 48 0.0016 28.4 2.4 34 265-298 161-195 (220)
173 2k9j_B Integrin beta-3; transm 20.7 91 0.0031 19.7 3.1 30 54-83 2-34 (43)
174 2yw8_A RUN and FYVE domain-con 20.4 76 0.0026 22.7 3.0 35 265-299 19-54 (82)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.72 E-value=3.8e-18 Score=132.38 Aligned_cols=77 Identities=35% Similarity=0.645 Sum_probs=65.9
Q ss_pred hhcCCCHHHHhhcccceeeeccccccCCCCCCCCCCCcccccCCCCCCcccCCCCCcccccccccccCCCeeEEeCCCCc
Q 020569 210 DQEGASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHH 289 (324)
Q Consensus 210 ~~~g~s~~~i~~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~C~ICL~~y~~~~~lr~LpC~H~ 289 (324)
...|++++.+++||.+.+...... ..++.+|+||+++|.+++.++.|||+|.
T Consensus 13 ~~~~~s~~~i~~lp~~~~~~~~~~----------------------------~~~~~~C~IC~~~~~~~~~~~~l~C~H~ 64 (91)
T 2l0b_A 13 ANPPASKESIDALPEILVTEDHGA----------------------------VGQEMCCPICCSEYVKGDVATELPCHHY 64 (91)
T ss_dssp CCCCCCHHHHHTSCEEECCTTCSS----------------------------SSSCSEETTTTEECCTTCEEEEETTTEE
T ss_pred CCCCCCHHHHHhCCCeeecccccc----------------------------cCCCCCCcccChhhcCCCcEEecCCCCh
Confidence 357899999999999887543211 1345789999999999999999999999
Q ss_pred cchhhHHHHHhcCCCCccccccccC
Q 020569 290 FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 290 FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
||..||++|++.+.+||+||+.+..
T Consensus 65 Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 65 FHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp EEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred HHHHHHHHHHHcCCcCcCcCccCCC
Confidence 9999999999999999999998864
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=5.4e-18 Score=126.50 Aligned_cols=53 Identities=45% Similarity=1.014 Sum_probs=49.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS 316 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 316 (324)
++.+|+||+++|.+++.++.+||+|.||..||++|++.+.+||+||+++...+
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~~ 74 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPSS 74 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCCCC
Confidence 45789999999999999999999999999999999999999999999987754
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.61 E-value=7.5e-16 Score=112.76 Aligned_cols=56 Identities=41% Similarity=1.012 Sum_probs=50.5
Q ss_pred CCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCC
Q 020569 262 SNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 317 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 317 (324)
..++.+|+||++.|.+++.++.+||+|.||..||.+|++.+.+||+||..+.....
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 34567899999999999999999999999999999999999999999999877544
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.61 E-value=3.3e-16 Score=109.46 Aligned_cols=50 Identities=50% Similarity=1.194 Sum_probs=46.7
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHHHhcCCCCcccccccc
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
++.+|+||+++|.+++....+| |+|.||.+||++|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 4578999999999999999998 9999999999999999999999999874
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=8.4e-16 Score=114.05 Aligned_cols=56 Identities=36% Similarity=0.812 Sum_probs=50.9
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCCc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSN 318 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~ 318 (324)
.++.+|+||+++|.+++.++.|||+|.||..||++|++.+.+||+||+++......
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 68 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQL 68 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCSC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccccc
Confidence 45679999999999999999999999999999999999999999999999765543
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.59 E-value=1.2e-15 Score=114.43 Aligned_cols=58 Identities=31% Similarity=0.814 Sum_probs=51.8
Q ss_pred CCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCCcc
Q 020569 262 SNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQ 319 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~~ 319 (324)
..++.+|+||++.|.+++.++.+||+|.||..||.+|++.+.+||+||..+...+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTAT 69 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccCC
Confidence 3456799999999999999999999999999999999999999999999998765543
No 7
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.6e-15 Score=113.90 Aligned_cols=52 Identities=31% Similarity=0.673 Sum_probs=43.2
Q ss_pred CCcccccccccccC-----------CCeeEEeC-CCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDD-----------GVELRELP-CGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~-----------~~~lr~Lp-C~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
++++|+||+++|++ ++.++.+| |+|.||.+||++||+.+.+||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 45678888888754 45566776 999999999999999999999999987653
No 8
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.51 E-value=1e-14 Score=101.70 Aligned_cols=50 Identities=34% Similarity=0.690 Sum_probs=44.3
Q ss_pred CCcccccccccccCC-CeeEEeCCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 264 EDAECCICLSAYDDG-VELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~~~-~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
++.+|+||+++|.++ +..+.+||+|.||.+||++|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 457899999999765 45788899999999999999999999999999874
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.51 E-value=1.2e-14 Score=116.68 Aligned_cols=57 Identities=25% Similarity=0.461 Sum_probs=46.8
Q ss_pred CCcccccccccccCCC---------------eeEEeCCCCccchhhHHHHH-----hcCCCCccccccccCCCCccc
Q 020569 264 EDAECCICLSAYDDGV---------------ELRELPCGHHFHCACVDKWL-----YINATCPLCKYNILKSSSNQD 320 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~---------------~lr~LpC~H~FH~~CId~WL-----~~~~tCPlCR~~I~~~~~~~~ 320 (324)
.+.+|+|||++|.+++ .++.+||+|.||..||++|+ +.+.+||+||..+.....++.
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g~qp 100 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQP 100 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSSCT
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCCCCC
Confidence 3468999999997653 45578999999999999999 457899999999987655543
No 10
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.6e-14 Score=109.36 Aligned_cols=55 Identities=33% Similarity=0.757 Sum_probs=46.7
Q ss_pred CCCCCcccccccccccCCCeeEEeCCC-----CccchhhHHHHHhcC--CCCccccccccCCC
Q 020569 261 LSNEDAECCICLSAYDDGVELRELPCG-----HHFHCACVDKWLYIN--ATCPLCKYNILKSS 316 (324)
Q Consensus 261 ~~~e~~~C~ICL~~y~~~~~lr~LpC~-----H~FH~~CId~WL~~~--~tCPlCR~~I~~~~ 316 (324)
...++.+|.||+++|++++.+ .+||+ |.||.+||++||+.+ .+||+||+.+....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 11 TPSSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CCTTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 345568899999999988776 69997 999999999999876 48999999987644
No 11
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.8e-14 Score=103.82 Aligned_cols=53 Identities=28% Similarity=0.633 Sum_probs=46.0
Q ss_pred CCCCcccccccccccCC----CeeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 262 SNEDAECCICLSAYDDG----VELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~----~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
..++.+|+||++.|.+. +.+..++|+|.||.+||++|++.+.+||+||.++..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 34568899999999864 445789999999999999999999999999998864
No 12
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.47 E-value=2.4e-14 Score=114.11 Aligned_cols=51 Identities=27% Similarity=0.541 Sum_probs=44.3
Q ss_pred CCCcccccccccccCC---------------CeeEEeCCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 263 NEDAECCICLSAYDDG---------------VELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~---------------~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
.+++.|+||+++|++. ..++.+||+|.||..||++||+.+.+||+||++..
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 3567899999999865 13678899999999999999999999999999854
No 13
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.45 E-value=2.5e-14 Score=104.87 Aligned_cols=55 Identities=27% Similarity=0.596 Sum_probs=47.7
Q ss_pred CCCcccccccccccCC----CeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCC
Q 020569 263 NEDAECCICLSAYDDG----VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 317 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~----~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 317 (324)
.++.+|+||++.|.+. +....+||+|.||.+||++|++.+.+||+||.++...+-
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 66 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhe
Confidence 4567899999999763 566789999999999999999999999999999886543
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.44 E-value=3.4e-14 Score=101.90 Aligned_cols=53 Identities=28% Similarity=0.610 Sum_probs=46.4
Q ss_pred CCcccccccccccCC----CeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCC
Q 020569 264 EDAECCICLSAYDDG----VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS 316 (324)
Q Consensus 264 e~~~C~ICL~~y~~~----~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 316 (324)
++.+|+||++.|.+. +.+..++|+|.||.+||++|++.+.+||+||.++...+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 58 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTC
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccc
Confidence 457899999999864 55678999999999999999999999999999987654
No 15
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=9.2e-14 Score=101.82 Aligned_cols=51 Identities=35% Similarity=0.989 Sum_probs=45.5
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 317 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 317 (324)
.++.+|+||++.+.+ ..+||+|.||..||++|++.+.+||+||+.+...+.
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCc
Confidence 456789999999887 679999999999999999999999999999886543
No 16
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.40 E-value=1.3e-13 Score=100.32 Aligned_cols=50 Identities=36% Similarity=0.806 Sum_probs=44.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
.++.+|+||++.+.+. ...+||+|.||..||++|++.+.+||+||.++..
T Consensus 3 ~~~~~C~IC~~~~~~~--~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPSNY--SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCCSC--EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCCeeCCccccCC--cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 3457899999998764 4789999999999999999999999999998864
No 17
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=6.3e-13 Score=98.05 Aligned_cols=55 Identities=22% Similarity=0.489 Sum_probs=46.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCCcc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQ 319 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~~ 319 (324)
.++..|+||++.+.+. +..+||+|.||..||++|++.+.+||+||..+...+...
T Consensus 13 ~~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 67 (72)
T 2djb_A 13 TPYILCSICKGYLIDA--TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLS 67 (72)
T ss_dssp CGGGSCTTTSSCCSSC--EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCC
T ss_pred CCCCCCCCCChHHHCc--CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccccc
Confidence 4568999999999875 333499999999999999999999999999998765443
No 18
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.1e-13 Score=100.37 Aligned_cols=50 Identities=32% Similarity=0.678 Sum_probs=44.3
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
.++.+|+||++.+.+. ..+||+|.||..||++|++.+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP---VSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSE---EEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCC---EEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 4567899999998775 6789999999999999999999999999998653
No 19
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=9.9e-13 Score=100.23 Aligned_cols=54 Identities=30% Similarity=0.628 Sum_probs=47.0
Q ss_pred CCCcccccccccccCCCe-eEEeCCCCccchhhHHHHHhcC---CCCccccccccCCC
Q 020569 263 NEDAECCICLSAYDDGVE-LRELPCGHHFHCACVDKWLYIN---ATCPLCKYNILKSS 316 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~-lr~LpC~H~FH~~CId~WL~~~---~tCPlCR~~I~~~~ 316 (324)
.++.+|+||++.|.+++. .+.+||+|.||..||++|++.+ .+||+||..+...+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 456789999999998765 6788999999999999999876 89999999886653
No 20
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.36 E-value=7.9e-14 Score=112.87 Aligned_cols=52 Identities=27% Similarity=0.498 Sum_probs=1.5
Q ss_pred CCCcccccccccccCC-------------C--eeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 263 NEDAECCICLSAYDDG-------------V--ELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~-------------~--~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
.+++.|+||+++|++. + .+..+||+|.||..||++||+.+.+||+||++...
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 112 (117)
T ss_dssp CCC----------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeee
Confidence 3567899999999762 2 23345899999999999999999999999998543
No 21
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.35 E-value=1e-12 Score=97.51 Aligned_cols=54 Identities=26% Similarity=0.598 Sum_probs=45.5
Q ss_pred CCCCcccccccccccCCCeeEEeC-CCCccchhhHHHHHhcC--CCCccccccccCCCCc
Q 020569 262 SNEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYIN--ATCPLCKYNILKSSSN 318 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~~~ 318 (324)
..++..|+||++.|.+. ..+| |+|.||..||++|++.+ .+||+||..+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~ 68 (74)
T 2yur_A 12 IPDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDAL 68 (74)
T ss_dssp SCGGGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTT
T ss_pred CCCCCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcccc
Confidence 34568999999999876 5699 99999999999999876 6899999987665443
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.5e-12 Score=95.83 Aligned_cols=52 Identities=31% Similarity=0.636 Sum_probs=44.0
Q ss_pred CCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHh---cCCCCccccccccCCC
Q 020569 262 SNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY---INATCPLCKYNILKSS 316 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~---~~~tCPlCR~~I~~~~ 316 (324)
..++..|+||++.|.+. ..+||+|.||..||.+|++ .+.+||+||.++..++
T Consensus 17 ~~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 17 LQEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCCBCTTTCSBCSSE---EECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred CccCCEeccCCcccCCe---EEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 34568999999999864 5679999999999999997 4678999999987653
No 23
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.4e-12 Score=98.34 Aligned_cols=48 Identities=21% Similarity=0.450 Sum_probs=43.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
.++..|+||++.|.+. ..+||+|.||..||.+|++.+.+||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQNP---VVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCSE---EECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcCe---eEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 4567899999999775 46899999999999999999999999999985
No 24
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=2.6e-12 Score=93.04 Aligned_cols=50 Identities=24% Similarity=0.560 Sum_probs=43.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHh-cCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~ 315 (324)
.++..|+||++.+.+.. .++|+|.||..||++|++ .+.+||+||.++..+
T Consensus 13 ~~~~~C~IC~~~~~~p~---~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPK---QTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCEECTTTCCEESSCC---CCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred CcCCCCCCCChHhcCee---ECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 45688999999998773 379999999999999994 678999999998765
No 25
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=5.4e-12 Score=93.81 Aligned_cols=55 Identities=27% Similarity=0.547 Sum_probs=45.7
Q ss_pred CCCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC--CCCccccccccCCCC
Q 020569 261 LSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN--ATCPLCKYNILKSSS 317 (324)
Q Consensus 261 ~~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~~ 317 (324)
..+...+|+||.+.+..++... .|+|.||..||++||+.+ .+||+||++...+..
T Consensus 11 y~~~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~~ 67 (74)
T 2ct0_A 11 YPDAVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP 67 (74)
T ss_dssp CSSSSCBCSSSCCBCSSSEECS--SSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCCC
T ss_pred ccCCCCcCcchhhHcccCCccC--CCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCCC
Confidence 3445579999999999876443 799999999999999987 899999998775544
No 26
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=88.45 Aligned_cols=44 Identities=32% Similarity=0.688 Sum_probs=38.3
Q ss_pred CCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHh---cCCCCccc
Q 020569 262 SNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY---INATCPLC 308 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~---~~~tCPlC 308 (324)
..++..|+||++.|.+. ..+||+|.||..||.+|++ .+.+||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSC---EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCCe---EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34568999999999876 5679999999999999998 46789998
No 27
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.24 E-value=1.9e-12 Score=107.61 Aligned_cols=48 Identities=27% Similarity=0.837 Sum_probs=42.8
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
+..|+||++.|.+. ..+||+|.||..||.+|++.+.+||+||.++...
T Consensus 53 ~~~C~iC~~~~~~~---~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 53 ELQCIICSEYFIEA---VTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HSBCTTTCSBCSSE---EEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred cCCCcccCcccCCc---eECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 35799999999775 6789999999999999999999999999998643
No 28
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.24 E-value=2.9e-12 Score=104.62 Aligned_cols=55 Identities=27% Similarity=0.596 Sum_probs=47.7
Q ss_pred CCCcccccccccccCC----CeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCC
Q 020569 263 NEDAECCICLSAYDDG----VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 317 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~----~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 317 (324)
.++.+|+||++.|.+. +....++|+|.||.+||++|++.+.+||+||+.+.....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 63 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCE
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccc
Confidence 4567899999999764 566889999999999999999999999999999876543
No 29
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.22 E-value=1.8e-11 Score=92.31 Aligned_cols=51 Identities=25% Similarity=0.587 Sum_probs=44.6
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc------CCCCccccccccCCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI------NATCPLCKYNILKSS 316 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~~ 316 (324)
.++..|+||++.|.+. ..+||+|.||..||.+|++. +..||+||..+...+
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecw_A 17 KEEVTCPICLELLKEP---VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGN 73 (85)
T ss_dssp CTTTSCTTTCSCCSSC---EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTC
T ss_pred ccCCCCcCCChhhCcc---eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHh
Confidence 4567999999999876 47899999999999999987 778999999987653
No 30
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-11 Score=92.21 Aligned_cols=51 Identities=29% Similarity=0.683 Sum_probs=44.5
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc------CCCCccccccccCCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI------NATCPLCKYNILKSS 316 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~~ 316 (324)
.++.+|+||++.|.+. ..+||+|.||..||.+|++. +..||+||..+...+
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 17 KEEVTCPICLELLTQP---LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCCTTTCSCCSSC---BCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred cCCCCCCCCCcccCCc---eeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 4568999999999876 45799999999999999987 789999999988654
No 31
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.4e-11 Score=86.40 Aligned_cols=43 Identities=33% Similarity=0.931 Sum_probs=37.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHH---hcCCCCccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWL---YINATCPLC 308 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL---~~~~tCPlC 308 (324)
.++..|+||++.|.+. ..+||+|.||..||++|+ +.+.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP---VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSC---CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCcc---EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4567899999999887 458999999999999995 457889998
No 32
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.18 E-value=1.2e-11 Score=89.13 Aligned_cols=54 Identities=28% Similarity=0.515 Sum_probs=44.1
Q ss_pred CCcccccccc-cccCCCee-EEeCCCCccchhhHHHHHhc-CCCCccccccccCCCC
Q 020569 264 EDAECCICLS-AYDDGVEL-RELPCGHHFHCACVDKWLYI-NATCPLCKYNILKSSS 317 (324)
Q Consensus 264 e~~~C~ICL~-~y~~~~~l-r~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~~ 317 (324)
++..|+||++ .|.+.... ..+||+|.||..||++|+.. +.+||+||..+..++-
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 58 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccc
Confidence 3568999999 78777543 45799999999999999765 4789999999987654
No 33
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.18 E-value=8.2e-12 Score=101.89 Aligned_cols=55 Identities=27% Similarity=0.609 Sum_probs=47.3
Q ss_pred CCCCcccccccccccCC----CeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCC
Q 020569 262 SNEDAECCICLSAYDDG----VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS 316 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~----~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 316 (324)
..++..|+||++.|++. .....++|+|.||..||++|++.+.+||+||.++.+++
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 34567899999999863 44578899999999999999999999999999998653
No 34
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.17 E-value=5.6e-12 Score=99.08 Aligned_cols=49 Identities=29% Similarity=0.685 Sum_probs=42.5
Q ss_pred CCcccccccccccCCCeeEE-eCCCCccchhhHHHHHhcC-CCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRE-LPCGHHFHCACVDKWLYIN-ATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~-LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 315 (324)
++..|+||++.|.+. .. ++|+|.||..||.+|++.+ .+||+||.++...
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 71 (100)
T 3lrq_A 21 EVFRCFICMEKLRDA---RLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLR 71 (100)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred CCCCCccCCccccCc---cccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHH
Confidence 447899999999864 45 8999999999999999987 7999999998654
No 35
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.17 E-value=5.7e-12 Score=94.09 Aligned_cols=50 Identities=28% Similarity=0.613 Sum_probs=43.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc-------CCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-------NATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-------~~tCPlCR~~I~~~ 315 (324)
.++.+|+||++.|.+. ..+||+|.||..||.+|++. +.+||+||..+...
T Consensus 10 ~~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~ 66 (79)
T 2egp_A 10 QEEVTCPICLELLTEP---LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 (79)
T ss_dssp CCCCEETTTTEECSSC---CCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSS
T ss_pred ccCCCCcCCCcccCCe---eECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHh
Confidence 4568899999999876 45899999999999999987 67899999998764
No 36
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.16 E-value=1.6e-11 Score=91.61 Aligned_cols=51 Identities=25% Similarity=0.499 Sum_probs=44.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc-CCCCccccccccCCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-NATCPLCKYNILKSS 316 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 316 (324)
.++..|+||++.|.+. ..+||+|.||..||.+|++. +.+||+||.++...+
T Consensus 6 ~~~~~C~IC~~~~~~P---v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~ 57 (78)
T 1t1h_A 6 PEYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG 57 (78)
T ss_dssp SSSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCC
T ss_pred cccCCCCCccccccCC---EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhh
Confidence 3467899999999876 56899999999999999987 789999999987543
No 37
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.15 E-value=9.9e-12 Score=97.18 Aligned_cols=49 Identities=22% Similarity=0.681 Sum_probs=42.8
Q ss_pred CCcccccccccccCCCeeEEe-CCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
++..|+||++.|.+. ..+ ||+|.||..||.+|++.+.+||+||..+...
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 70 (99)
T 2y43_A 21 DLLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEP 70 (99)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGG
T ss_pred CCCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChh
Confidence 357899999999874 445 8999999999999999999999999988753
No 38
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.11 E-value=3.1e-11 Score=95.93 Aligned_cols=50 Identities=24% Similarity=0.630 Sum_probs=43.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
++..|+||++.|.+. +..+||+|.||..||.+|++.+.+||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDA--TTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSE--EEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCc--CEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 457899999999764 33349999999999999999999999999998764
No 39
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.09 E-value=9.9e-11 Score=90.05 Aligned_cols=48 Identities=29% Similarity=0.691 Sum_probs=42.1
Q ss_pred CCCcccccccccccCCCeeEEeC-CCCccchhhHHHHHhcC--CCCcccccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYIN--ATCPLCKYNIL 313 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~--~tCPlCR~~I~ 313 (324)
.++..|+||++.|.+. ..+| |+|.||..||.+|+..+ .+||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSSC---EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcCc---eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 4568999999999876 6789 99999999999999754 58999999874
No 40
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.07 E-value=5.1e-11 Score=96.95 Aligned_cols=48 Identities=23% Similarity=0.566 Sum_probs=41.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC-CCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN-ATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~ 314 (324)
++..|+||++.|.+. ..+||+|.||..||.+|++.+ .+||+||.++..
T Consensus 51 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRP---ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCc---EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 346899999999876 568999999999999999855 489999999976
No 41
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.03 E-value=1.3e-10 Score=92.43 Aligned_cols=49 Identities=39% Similarity=0.666 Sum_probs=42.0
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCC---CCccccccccCCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA---TCPLCKYNILKSS 316 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~---tCPlCR~~I~~~~ 316 (324)
+..|+||++.|.+. ..+||+|.||..||.+|+..+. +||+||.++...+
T Consensus 21 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (112)
T 1jm7_A 21 ILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (112)
T ss_dssp HTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred CCCCcccChhhcCe---EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhh
Confidence 35799999999876 3479999999999999998754 8999999987654
No 42
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.02 E-value=1.3e-10 Score=99.27 Aligned_cols=49 Identities=27% Similarity=0.646 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc-CCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-NATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 314 (324)
++..|+||++.|.+. +..+||+|.||..||++|++. +.+||+||.++..
T Consensus 53 ~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKNT--MTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSSE--EEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhCc--CEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 456899999999874 444599999999999999997 7889999999854
No 43
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.00 E-value=4.4e-11 Score=95.98 Aligned_cols=50 Identities=24% Similarity=0.635 Sum_probs=43.2
Q ss_pred CCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc-CCCCccccccccC
Q 020569 262 SNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-NATCPLCKYNILK 314 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 314 (324)
..++..|+||++.|.+. ..+||+|.||..||.+|++. +.+||+||..+..
T Consensus 12 ~~~~~~C~iC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEP---VTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSC---EECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCce---eEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 34567899999999876 67799999999999999976 6789999998864
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.00 E-value=1.5e-10 Score=93.39 Aligned_cols=50 Identities=34% Similarity=0.673 Sum_probs=43.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCC-CCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA-TCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 315 (324)
.++..|+||++.+.+. ..+||+|.||..||.+|++.+. +||+||.++...
T Consensus 16 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 16 ESKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCcCChhhcCe---EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 3457899999999876 5689999999999999998765 999999998764
No 45
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.97 E-value=1.4e-10 Score=93.20 Aligned_cols=49 Identities=29% Similarity=0.672 Sum_probs=43.0
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhc-CCCCccccccccCCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-NATCPLCKYNILKSS 316 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 316 (324)
+..|+||++.+.+. ..+||+|.||..||++|++. +.+||+||.++...+
T Consensus 23 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 23 SISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCcHhcCc---EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 46899999999875 45899999999999999987 789999999987644
No 46
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.95 E-value=2.2e-10 Score=96.57 Aligned_cols=48 Identities=17% Similarity=0.446 Sum_probs=42.3
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCC-CCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA-TCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 315 (324)
+..|+||++.|.+. ..+||+|.||..||.+|++.+. +||+||.++...
T Consensus 78 ~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQP---VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcCC---EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 46899999999876 4589999999999999998764 899999998875
No 47
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.94 E-value=4.7e-10 Score=79.98 Aligned_cols=48 Identities=31% Similarity=0.708 Sum_probs=38.4
Q ss_pred CCCcccccccccccCCCeeEEeCCC--C---ccchhhHHHHHhc--CCCCcccccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCG--H---HFHCACVDKWLYI--NATCPLCKYNIL 313 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~--H---~FH~~CId~WL~~--~~tCPlCR~~I~ 313 (324)
++...|.||+++. ++++ .+||+ | .||.+|+++|+.. +.+||+||+.+.
T Consensus 4 ~~~~~CrIC~~~~--~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEEL--GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEEC--SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCC--CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 3557899999983 3344 68965 4 9999999999975 688999999875
No 48
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.91 E-value=4.1e-10 Score=81.22 Aligned_cols=47 Identities=28% Similarity=0.541 Sum_probs=40.2
Q ss_pred CCcccccccccccCCCeeEEe--CCCCc-cchhhHHHHHhcCCCCcccccccc
Q 020569 264 EDAECCICLSAYDDGVELREL--PCGHH-FHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~L--pC~H~-FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
++.+|.||++...+. ..+ ||+|. |..+|+++|.+.+..||+||++|.
T Consensus 7 ~~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRPKNG---CIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSCSCE---EEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CcCCCCcCCCCCCCE---EEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 456899999986655 344 99999 789999999999999999999885
No 49
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.89 E-value=1.1e-09 Score=82.19 Aligned_cols=54 Identities=19% Similarity=0.448 Sum_probs=42.4
Q ss_pred CCCcccccccccccCCCeeEEe--CCCCccchhhHHHHHh-cCCCCccccccccCCCC
Q 020569 263 NEDAECCICLSAYDDGVELREL--PCGHHFHCACVDKWLY-INATCPLCKYNILKSSS 317 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L--pC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~~~ 317 (324)
.++.+|+||++.+...+. +.+ +|+|.|+..|+.++.+ .+..||.||+.+.....
T Consensus 9 ~~~~~CpICle~~~~~d~-~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDI-NFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65 (78)
T ss_dssp CCCCBCTTTCCBCCTTTT-TCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSS
T ss_pred ccCCcCCccCccCccccc-cccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCch
Confidence 456899999999865432 234 4999999999999875 46789999999876543
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.89 E-value=3e-10 Score=79.61 Aligned_cols=49 Identities=20% Similarity=0.478 Sum_probs=41.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 317 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 317 (324)
.++..|+||++.|.+. +.|||+|.||..||.+| +..||+||+.+....+
T Consensus 4 ~~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~~ 52 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGAD 52 (56)
T ss_dssp CCCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCSS
T ss_pred ccCCCceEeCCccCCe---EEcCCCCcccHHHHccC---CCCCCcCCcEeecCCc
Confidence 3457899999999976 57899999999999884 7789999999876543
No 51
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.85 E-value=1.2e-09 Score=104.84 Aligned_cols=48 Identities=29% Similarity=0.695 Sum_probs=42.4
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHh-cCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~ 315 (324)
..+|+||++.+.+. ..+||+|.||..|+..|++ .+.+||+||.++...
T Consensus 332 ~~~C~ICle~~~~p---v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAENDKDV---KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSBCCE---EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCCCCe---EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 36999999998664 7899999999999999999 789999999988753
No 52
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.84 E-value=5.6e-10 Score=104.75 Aligned_cols=53 Identities=32% Similarity=0.752 Sum_probs=42.1
Q ss_pred CCCcccccccccccCCCeeE-----EeCCCCccchhhHHHHHhcC-----------CCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELR-----ELPCGHHFHCACVDKWLYIN-----------ATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr-----~LpC~H~FH~~CId~WL~~~-----------~tCPlCR~~I~~~ 315 (324)
.+..+|+||++.+.++.++- ..+|+|.||..||.+||+.. .+||.||++|..+
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 34578999999999844432 34699999999999999753 4699999988643
No 53
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.82 E-value=1.3e-09 Score=90.85 Aligned_cols=49 Identities=18% Similarity=0.455 Sum_probs=42.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCC-CCccccccccC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA-TCPLCKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~-tCPlCR~~I~~ 314 (324)
.++..|+||++.+.+. ..++|+|.||..||.+|++.+. +||+||.++..
T Consensus 29 ~~~~~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 29 EAKYLCSACRNVLRRP---FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred CcCcCCCCCChhhcCc---EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 4567999999999887 5689999999999999998664 89999998743
No 54
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.81 E-value=5.5e-09 Score=81.76 Aligned_cols=50 Identities=14% Similarity=0.099 Sum_probs=45.2
Q ss_pred CCCcccccccccccCCCeeEEeCCC-CccchhhHHHHHhcCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCG-HHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
.++..|+||++-|+|. ..+||+ |.|...||.+|+..+.+||+||.++...
T Consensus 20 p~~~~CpI~~~~m~dP---V~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~ 70 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMD 70 (98)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTT
T ss_pred cHhcCCcCccccccCC---eECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChh
Confidence 4678999999999998 678999 9999999999999999999999988754
No 55
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.81 E-value=3.4e-09 Score=80.72 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=45.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
.++..|+||++-|++. ..+||+|.|...||.+|+..+.+||+||..+...
T Consensus 12 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~ 61 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDP---VRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTES 61 (85)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred chheECcccCchhcCC---eECCCCCEECHHHHHHHHhcCCCCCCCcCCCChH
Confidence 4568999999999998 6789999999999999999999999999987653
No 56
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.78 E-value=1.7e-09 Score=77.67 Aligned_cols=49 Identities=27% Similarity=0.493 Sum_probs=40.1
Q ss_pred CcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
+..|.||++...+.. +..+||+|. |..+|+.+|.+.+..||+||++|..
T Consensus 7 ~~~C~IC~~~~~~~~-~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 56 (63)
T 2vje_B 7 LKPCSLCEKRPRDGN-IIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 56 (63)
T ss_dssp GSBCTTTSSSBSCEE-EEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCE
T ss_pred CCCCcccCCcCCCeE-EEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhc
Confidence 468999999866541 222399998 9999999999989999999998853
No 57
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.78 E-value=1.1e-09 Score=88.17 Aligned_cols=47 Identities=23% Similarity=0.507 Sum_probs=41.0
Q ss_pred CCcccccccccccCCCeeEEe-CCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
++..|+||++.|.+. ..+ ||+|.||..||..|+. ..||+||..+...
T Consensus 21 ~~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~ 68 (117)
T 1jm7_B 21 KLLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQ 68 (117)
T ss_dssp HTTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCS
T ss_pred hCCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccc
Confidence 457899999999876 456 8999999999999998 8899999998543
No 58
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.78 E-value=5.9e-09 Score=81.88 Aligned_cols=50 Identities=16% Similarity=0.190 Sum_probs=45.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
.++..|+||++-|.|. ..+||+|.|...||.+|+..+.+||+||.++...
T Consensus 27 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~ 76 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDP---VRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTES 76 (100)
T ss_dssp STTTBCTTTCSBCSSE---EEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTT
T ss_pred cHhhCCcCccCcccCC---eECCCCCEEchHHHHHHHHcCCCCCCCCCCCChh
Confidence 4568999999999998 6789999999999999999999999999988753
No 59
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.75 E-value=1.4e-09 Score=80.60 Aligned_cols=44 Identities=30% Similarity=0.583 Sum_probs=38.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
++..|.||++.+.+. ..+||+|. |+..|+.+| .+||+||.++..
T Consensus 23 ~~~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCE---EEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCE---EEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 346899999987664 67899999 999999999 899999998864
No 60
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=1.4e-08 Score=74.01 Aligned_cols=49 Identities=24% Similarity=0.617 Sum_probs=40.2
Q ss_pred cCCCCCcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccCC
Q 020569 260 VLSNEDAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 260 ~~~~e~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
....++..|.||++...+ ...+||+|. |+..|+.. ...||+||.+|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQES 59 (68)
T ss_dssp CSCCCSSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCE
T ss_pred ccCCCCCCCCCcCcCCCC---EEEECCCChhhhHHHHhc----CCCCCCCCcchhce
Confidence 445567899999998655 478999999 99999984 58999999988653
No 61
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.64 E-value=1.1e-08 Score=87.60 Aligned_cols=50 Identities=34% Similarity=0.664 Sum_probs=43.2
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC-CCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN-ATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 315 (324)
.++..|+||++.+.+. ..+||+|.|+..||.+|++.+ .+||+||.++..+
T Consensus 16 ~~~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 16 ESKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCChhhcCc---EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 3457899999999876 568999999999999999864 5999999998764
No 62
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=3e-08 Score=76.77 Aligned_cols=46 Identities=20% Similarity=0.425 Sum_probs=39.3
Q ss_pred CCCcccccccccccCCCeeEEeC-CCCccchhhHHHHHhcC------CCCcc--cccc
Q 020569 263 NEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYIN------ATCPL--CKYN 311 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~------~tCPl--CR~~ 311 (324)
.++..|+||++-|.+. ..+| |+|.|...||.+|+..+ .+||+ |+..
T Consensus 5 ~~~~~CPI~~~~~~dP---V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKP---VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSSE---EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcCC---EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3457899999999986 5676 99999999999999864 58999 9865
No 63
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=1.6e-08 Score=74.98 Aligned_cols=44 Identities=30% Similarity=0.586 Sum_probs=37.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
++.+|.||++.+.+. ..+||+|. |+..|+.+ ...||+||.++..
T Consensus 24 ~~~~C~IC~~~~~~~---~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCB---CCSSSCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCE---EEecCCCHHHHHHHhhC----CCCCccCCceecC
Confidence 456899999997665 56899999 99999964 4889999998865
No 64
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.51 E-value=6.1e-08 Score=88.40 Aligned_cols=50 Identities=10% Similarity=0.083 Sum_probs=43.3
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC-CCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN-ATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 315 (324)
.++..|+||++-|.++ ..+||+|.|+..||.+|+..+ .+||+||.++...
T Consensus 206 ~~~~~c~i~~~~~~dP---v~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~ 256 (281)
T 2c2l_A 206 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQE 256 (281)
T ss_dssp CSTTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGG
T ss_pred CcccCCcCcCCHhcCC---eECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchh
Confidence 4567899999999988 679999999999999999864 5599999988643
No 65
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.48 E-value=5.6e-08 Score=75.01 Aligned_cols=48 Identities=21% Similarity=0.549 Sum_probs=40.7
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc--------CCCCcc--cccc
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI--------NATCPL--CKYN 311 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~--------~~tCPl--CR~~ 311 (324)
+..+|.||++++.+++-++..+|+|.|+.+|+..+++. ...||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 45689999999988877766789999999999999964 237999 9987
No 66
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.38 E-value=5.6e-08 Score=72.91 Aligned_cols=43 Identities=23% Similarity=0.665 Sum_probs=36.5
Q ss_pred CcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
+..|.||++.+.+. ..+||+|. |...|+..| ..||+||.++..
T Consensus 18 ~~~C~IC~~~~~~~---v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 18 AMLCMVCCEEEINS---TFCPCGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HTBCTTTSSSBCCE---EEETTCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCEeEEeCcccCcE---EEECCCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 46899999986654 78899999 999999987 499999998864
No 67
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.28 E-value=3.2e-07 Score=79.28 Aligned_cols=50 Identities=10% Similarity=0.076 Sum_probs=43.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC-CCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN-ATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 315 (324)
.+...|+||++-|.++ ..+||+|.|...||.+|+..+ .+||+|+.++...
T Consensus 104 p~~f~CPI~~elm~DP---V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~ 154 (179)
T 2f42_A 104 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQD 154 (179)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred cHhhcccCccccCCCC---eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChh
Confidence 4557899999999987 677999999999999999874 5799999988653
No 68
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.22 E-value=2.5e-07 Score=87.90 Aligned_cols=45 Identities=27% Similarity=0.646 Sum_probs=39.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCc-cchhhHHHHHhcCCCCccccccccC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHH-FHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
.++..|+||++.+.+. ..+||+|. |+..|+..| ..||+||.++..
T Consensus 293 ~~~~~C~IC~~~~~~~---v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSV---VFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCCE---EEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCce---EEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 3567999999998764 67899999 999999998 789999998864
No 69
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.22 E-value=3.9e-07 Score=64.93 Aligned_cols=48 Identities=8% Similarity=0.050 Sum_probs=42.1
Q ss_pred cccccccccccCCCeeEEe-CCCCccchhhHHHHHhcCCCCccccccccCCC
Q 020569 266 AECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYINATCPLCKYNILKSS 316 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 316 (324)
..|+||++-++|. ..+ +|+|.|-..||.+|++.+.+||+++.++...+
T Consensus 4 ~~CpIs~~~m~dP---V~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~ 52 (61)
T 2bay_A 4 MLCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEE 52 (61)
T ss_dssp CCCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGG
T ss_pred EEecCCCCCCCCC---EEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhh
Confidence 4699999999976 566 79999999999999999999999999886543
No 70
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.06 E-value=2.1e-06 Score=78.04 Aligned_cols=50 Identities=22% Similarity=0.442 Sum_probs=41.7
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC--CCCcc--ccccccC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN--ATCPL--CKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~--~tCPl--CR~~I~~ 314 (324)
..+..|+||++-|.++ ++.+.|+|.|...||.+|++.+ .+||+ |+..+..
T Consensus 179 ~~el~CPIcl~~f~DP--Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPYEAP--LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBCSSE--EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCcccCC--eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 4567999999999766 4556899999999999999864 57999 9997754
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.82 E-value=8.9e-06 Score=62.98 Aligned_cols=46 Identities=26% Similarity=0.465 Sum_probs=37.4
Q ss_pred cccccccccCCCeeEEeCCCCccchhhHHHHHhc-CCCCccccccccCC
Q 020569 268 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYI-NATCPLCKYNILKS 315 (324)
Q Consensus 268 C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~ 315 (324)
|.+|--.+. ...|.+||+|.|+-+|+..|.++ ..+||.|+.+|..-
T Consensus 4 C~~C~~Pi~--iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 4 CDKCGLPIK--VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRI 50 (101)
T ss_dssp CTTTCSBCS--EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEE
T ss_pred cCccCCCeE--EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeee
Confidence 666755543 45699999999999999999865 68999999988653
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.65 E-value=2.6e-05 Score=70.35 Aligned_cols=52 Identities=31% Similarity=0.575 Sum_probs=41.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCC--CCccccccccCCCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA--TCPLCKYNILKSSS 317 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~--tCPlCR~~I~~~~~ 317 (324)
...+|.||-+-...+.... .|+|.||..|+++|++.+. +||.|+.+......
T Consensus 179 ~i~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~~ 232 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP 232 (238)
T ss_dssp TCCBCTTTCSBCSSCEECS--SSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSCCC
T ss_pred CCCcCcchhhHHhCCcccC--ccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Confidence 3578999999988774332 2999999999999998654 89999998765533
No 73
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.85 E-value=0.024 Score=40.49 Aligned_cols=47 Identities=23% Similarity=0.391 Sum_probs=32.7
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKYNI 312 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~~I 312 (324)
..++.|.||-+. ++.+.==.|...||..|++..|... =.||.|+.+-
T Consensus 10 ~~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 10 APGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 345789999642 3322222388999999999988653 3599997654
No 74
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=94.63 E-value=0.0092 Score=45.41 Aligned_cols=47 Identities=21% Similarity=0.525 Sum_probs=38.4
Q ss_pred CCcccccccccccCCCeeEEeCCC-CccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCG-HHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
+...|-.|.-+.+. ...|+ |..+..|+..-|.++..||+|+.++..+
T Consensus 27 G~~nCKsCWf~~k~-----LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtk 74 (99)
T 2ko5_A 27 GPQFCKSCWFENKG-----LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK 74 (99)
T ss_dssp CCCCCCSSCSCCSS-----EEECSSCEEEHHHHHHTCSSSSEETTTTEECCCC
T ss_pred CcccChhhccccCC-----eeeecchhhHHHHHHHHHhhccCCcccCCcCCcc
Confidence 44679999876432 35676 9999999999999999999999998764
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=93.42 E-value=0.039 Score=42.18 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=28.3
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHH-HH
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDK-WL 299 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~-WL 299 (324)
++..|.||+++|..+....-++|+|.|...|+.. |-
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 4578999998865544445589999999999998 54
No 76
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=91.53 E-value=0.071 Score=40.23 Aligned_cols=54 Identities=22% Similarity=0.365 Sum_probs=34.4
Q ss_pred CCCCCcccccccccc-cCCCeeEEeC-CCCccchhhHHHHHh--cCCCCccccccccC
Q 020569 261 LSNEDAECCICLSAY-DDGVELRELP-CGHHFHCACVDKWLY--INATCPLCKYNILK 314 (324)
Q Consensus 261 ~~~e~~~C~ICL~~y-~~~~~lr~Lp-C~H~FH~~CId~WL~--~~~tCPlCR~~I~~ 314 (324)
...++..|.||...- .+++.+..-. |.-.||..|+..=+. ..=.||.|......
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTS
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccch
Confidence 345678999998764 2333333333 778999999985321 12349999775443
No 77
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=89.96 E-value=0.046 Score=42.66 Aligned_cols=51 Identities=24% Similarity=0.350 Sum_probs=34.9
Q ss_pred cccccccccccCCCeeEEe--CCCCccchhhHHHHHh----------cCCCCccccccccCCC
Q 020569 266 AECCICLSAYDDGVELREL--PCGHHFHCACVDKWLY----------INATCPLCKYNILKSS 316 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L--pC~H~FH~~CId~WL~----------~~~tCPlCR~~I~~~~ 316 (324)
..|.||...|.++.....- .|..=||.+|+.-=-. .+-.||.|+..-....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~~ 66 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGSG 66 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC-
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCCC
Confidence 4699999999877655444 3778899999863210 3456999987554433
No 78
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=88.76 E-value=0.15 Score=35.67 Aligned_cols=49 Identities=22% Similarity=0.416 Sum_probs=34.3
Q ss_pred CCCcccccccccccCCCeeEEe-CCCCccchhhHHHHHh-----cCCCCcccccc
Q 020569 263 NEDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLY-----INATCPLCKYN 311 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~-----~~~tCPlCR~~ 311 (324)
.++..|+||-..|.++.....- .|..=||..|+.---. ..-.||.|+..
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 4557799999998765543333 3888899999875432 24569999753
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=87.86 E-value=0.32 Score=33.89 Aligned_cols=45 Identities=22% Similarity=0.557 Sum_probs=30.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc----CCCCccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI----NATCPLCKY 310 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~----~~tCPlCR~ 310 (324)
.++..|.+|-.. ++-+.--.|...||..|++.=+.. .=.||.|++
T Consensus 9 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 456789999763 332222237789999999985543 235999975
No 80
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=87.00 E-value=0.35 Score=36.44 Aligned_cols=50 Identities=24% Similarity=0.396 Sum_probs=33.2
Q ss_pred cCCCCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccccc
Q 020569 260 VLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKYNI 312 (324)
Q Consensus 260 ~~~~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~~I 312 (324)
....+++.|.+|-.. ++-+.--.|.-.||..|+++=|..- =.||.|+..-
T Consensus 20 ~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 20 TLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred ccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 445567899999864 3322222377899999998755432 3499998643
No 81
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=86.80 E-value=0.24 Score=32.95 Aligned_cols=45 Identities=29% Similarity=0.567 Sum_probs=28.2
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccc
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~ 310 (324)
+.|.||-..-.+++-+.=-.|...||..|+++=+... =.||.|+.
T Consensus 1 a~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 1 ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 3588897764333322222388999999997544322 23999965
No 82
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=86.46 E-value=0.17 Score=35.82 Aligned_cols=48 Identities=27% Similarity=0.564 Sum_probs=32.1
Q ss_pred CCCcccccccccccCCCeeEEe-CCCCccchhhHHHHHhc----CCCCccccccccC
Q 020569 263 NEDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYI----NATCPLCKYNILK 314 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 314 (324)
.++..|.||-.. ++ +..- .|...||..|+++=|.. .=.||.|+..-.+
T Consensus 6 ~~~~~C~vC~~~---g~-ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 58 (66)
T 1xwh_A 6 KNEDECAVCRDG---GE-LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQ 58 (66)
T ss_dssp SCCCSBSSSSCC---SS-CEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCC
T ss_pred CCCCCCccCCCC---CC-EEEcCCCChhhcccccCCCcCcCCCCCeECccccCcccc
Confidence 456789999864 33 3233 37799999999865543 2249999764433
No 83
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=85.93 E-value=0.75 Score=34.22 Aligned_cols=32 Identities=25% Similarity=0.702 Sum_probs=23.8
Q ss_pred CCCcccccccccccCCCeeEEeC---CCCccchhhHHHH
Q 020569 263 NEDAECCICLSAYDDGVELRELP---CGHHFHCACVDKW 298 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~Lp---C~H~FH~~CId~W 298 (324)
..|..|.|| ..|..++ .+| |+-.||..|+.+=
T Consensus 13 ~~D~~C~VC-~~~t~~~---l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVC-EVWTAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT-CCCCSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CCCcccCcc-ccccccc---eeccccccccccHhhcccc
Confidence 467899999 4444443 356 6799999999995
No 84
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=84.66 E-value=0.22 Score=42.40 Aligned_cols=47 Identities=23% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKYNI 312 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~~I 312 (324)
.+++.|.+|-.. ++-+.-=.|...||..|+++-+... =.||.|+..-
T Consensus 2 ~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 356789999744 4322111377999999998876542 3499998743
No 85
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=84.43 E-value=0.24 Score=34.53 Aligned_cols=48 Identities=27% Similarity=0.483 Sum_probs=30.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc----CCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI----NATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 314 (324)
++..|.+|-+. ++-+.-=.|...||..|++.=|.. .=.||.|+....+
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 8 HMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp SCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCT
T ss_pred CCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchhc
Confidence 45779999752 322211137789999999965543 2249999875544
No 86
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=84.17 E-value=0.32 Score=37.86 Aligned_cols=47 Identities=32% Similarity=0.613 Sum_probs=30.9
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc----CCCCcccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI----NATCPLCK 309 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~----~~tCPlCR 309 (324)
.+++.|.||.+.-+..+-+.=-.|...||..|++..+.. .-.||-|+
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 456889999877332222333348899999999987742 23466664
No 87
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.01 E-value=0.14 Score=38.88 Aligned_cols=49 Identities=22% Similarity=0.393 Sum_probs=32.3
Q ss_pred CCCCcccccccccccCCCeeEEe-CCCCccchhhHHHHHhcC----CCCcccccc
Q 020569 262 SNEDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYIN----ATCPLCKYN 311 (324)
Q Consensus 262 ~~e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~~----~tCPlCR~~ 311 (324)
..++..|.||-..-.++ .+..- -|...||..|+++=|... =.||.|+..
T Consensus 13 ~~~~~~C~vC~~~~~~~-~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDD-KLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGG-GCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCC-CEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34567899998774333 33333 388999999998544322 239999764
No 88
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=83.33 E-value=0.14 Score=35.51 Aligned_cols=49 Identities=29% Similarity=0.589 Sum_probs=32.4
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhc----CCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI----NATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~----~~tCPlCR~~I~~~ 315 (324)
++..|.+|-.. ++-+.-=.|...||..|+++=+.. .=.||.|+....++
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~~ 56 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 56 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHHHT
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhhch
Confidence 45789999864 332222237899999999965543 23499997765543
No 89
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=82.88 E-value=0.36 Score=34.83 Aligned_cols=51 Identities=25% Similarity=0.421 Sum_probs=33.9
Q ss_pred CCcccccccccccCCCeeEEe-CCCCccchhhHHHHHhc----CCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYI----NATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~----~~tCPlCR~~I~~~ 315 (324)
++..|.||-.... ++....- -|.--||..|+..-... .-.||.|+..+.+.
T Consensus 17 ~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 17 QIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 72 (75)
T ss_dssp EEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSC
T ss_pred CCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhc
Confidence 3456999987754 3333232 37789999999865532 34599998876543
No 90
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=81.54 E-value=0.59 Score=40.00 Aligned_cols=47 Identities=26% Similarity=0.490 Sum_probs=33.7
Q ss_pred cccccccccccCCCe---eEEeC-CCCccchhhHHHH------Hh-----cCCCCccccccc
Q 020569 266 AECCICLSAYDDGVE---LRELP-CGHHFHCACVDKW------LY-----INATCPLCKYNI 312 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~---lr~Lp-C~H~FH~~CId~W------L~-----~~~tCPlCR~~I 312 (324)
..|+||-..|.+++. ...-- |.+=||..|+.-= +. ..-.||.|+..-
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 469999999998873 44443 8899999998531 11 146899998743
No 91
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=81.23 E-value=0.42 Score=41.50 Aligned_cols=45 Identities=24% Similarity=0.499 Sum_probs=30.7
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHHHhcC----CCCccccccc
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYIN----ATCPLCKYNI 312 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~----~tCPlCR~~I 312 (324)
++..|.+|-.. + .+..-. |...||..|+++-+... =.||.|+..-
T Consensus 6 ~~~~C~~C~~~---g-~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNG---G-DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCC---E-EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC---C-ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 45779999743 3 332223 77999999998876532 3499998643
No 92
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.95 E-value=0.22 Score=34.00 Aligned_cols=45 Identities=27% Similarity=0.562 Sum_probs=29.5
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKY 310 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~ 310 (324)
.++..|.+|-.. ++-+.--.|...||..|+++=|... =.||.|+.
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 456789999864 3322222378999999999655432 23888854
No 93
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.08 E-value=1.2 Score=32.47 Aligned_cols=43 Identities=23% Similarity=0.424 Sum_probs=27.4
Q ss_pred ccccccccccCCCeeEEe-CCCCccchhhHHHHHhc-----CCCCccccc
Q 020569 267 ECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYI-----NATCPLCKY 310 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~-----~~tCPlCR~ 310 (324)
.|.||-..= +++.+..- .|...||..|+++=|.. .=.||.|+.
T Consensus 28 ~C~vC~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKH-EPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCC-CSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcC-CCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 788897642 23333333 37899999999954432 124999865
No 94
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=77.51 E-value=0.97 Score=31.58 Aligned_cols=50 Identities=22% Similarity=0.542 Sum_probs=33.2
Q ss_pred CCCcccccccccccC-CCeeEEeC-CCCccchhhHHHHHh-------cCCCCccccccc
Q 020569 263 NEDAECCICLSAYDD-GVELRELP-CGHHFHCACVDKWLY-------INATCPLCKYNI 312 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~-~~~lr~Lp-C~H~FH~~CId~WL~-------~~~tCPlCR~~I 312 (324)
.++..|.+|.....+ ++.+..-. |+-.||..|++.=+. ..=.||.|+...
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 456789999987543 33333333 889999999986442 123499997643
No 95
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=77.47 E-value=0.25 Score=37.16 Aligned_cols=56 Identities=16% Similarity=0.338 Sum_probs=37.1
Q ss_pred CCcccccccccccCC-CeeEEeC-CCCccchhhHHHHHhc--------CCCCccccccccCCCCcc
Q 020569 264 EDAECCICLSAYDDG-VELRELP-CGHHFHCACVDKWLYI--------NATCPLCKYNILKSSSNQ 319 (324)
Q Consensus 264 e~~~C~ICL~~y~~~-~~lr~Lp-C~H~FH~~CId~WL~~--------~~tCPlCR~~I~~~~~~~ 319 (324)
++..|.+|...-.++ +.+..-- |+..||..|+++=|.. .=.||.|+..........
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~~~~~ 80 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQKN 80 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCSTTCC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhhcccc
Confidence 467899999764432 3333333 8899999999876541 234999987666554433
No 96
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.34 E-value=1.8 Score=31.20 Aligned_cols=48 Identities=25% Similarity=0.381 Sum_probs=30.8
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHH---------hcCCCCcccccccc
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWL---------YINATCPLCKYNIL 313 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL---------~~~~tCPlCR~~I~ 313 (324)
..-+||-..+.++.-+.--.|..=||..|+.-=. ..+-.||.|+..-.
T Consensus 16 ~~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 16 ALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp CCCSTTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCEEECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 3445998887644333222488889999985321 24677999976443
No 97
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=75.29 E-value=0.86 Score=35.56 Aligned_cols=45 Identities=22% Similarity=0.465 Sum_probs=29.7
Q ss_pred cccccccccccCCCeeEEeC-CCCccchhhHHHHHhcC----CCCccccc
Q 020569 266 AECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYIN----ATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~~----~tCPlCR~ 310 (324)
..|.+|-..-++++.+..-- |...||..|+++=|... =.||.|+.
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 36888876533334443333 88999999998755432 35999974
No 98
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=74.55 E-value=1.2 Score=29.71 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=29.2
Q ss_pred ccccccccccCCCeeEEe--CCCCccchhhHHHHH----hcCCCCcccc
Q 020569 267 ECCICLSAYDDGVELREL--PCGHHFHCACVDKWL----YINATCPLCK 309 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~L--pC~H~FH~~CId~WL----~~~~tCPlCR 309 (324)
.|++|...|.+++....- .|..=||..|+.--- ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 589999999766543332 377789999986422 2456799885
No 99
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=73.40 E-value=2.5 Score=29.75 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=25.3
Q ss_pred CCCcccccccccccCCCeeEEe--CCCCccchhhHHH
Q 020569 263 NEDAECCICLSAYDDGVELREL--PCGHHFHCACVDK 297 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L--pC~H~FH~~CId~ 297 (324)
.....|++|...|.+++....- .|.--||..|+.-
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvgl 42 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGM 42 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTC
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCC
Confidence 4456899999999877655444 4888899999853
No 100
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=71.15 E-value=0.65 Score=33.25 Aligned_cols=43 Identities=28% Similarity=0.528 Sum_probs=25.9
Q ss_pred ccccccccccCCCeeEEeC-CCCccchhhHHHHHhc-----CCCCccccc
Q 020569 267 ECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYI-----NATCPLCKY 310 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~~-----~~tCPlCR~ 310 (324)
.|.+|-..= +++.+..-- |...||..|+++=|.. .=.||.|+.
T Consensus 20 ~C~~C~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcC-CCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 466776542 233332323 7799999999954432 224999864
No 101
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=70.15 E-value=3.7 Score=31.86 Aligned_cols=48 Identities=25% Similarity=0.471 Sum_probs=30.8
Q ss_pred CCCcccccccccccCCCeeEEe---CCCCccchhhHHHHHhcC----CCCccccccccCCC
Q 020569 263 NEDAECCICLSAYDDGVELREL---PCGHHFHCACVDKWLYIN----ATCPLCKYNILKSS 316 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L---pC~H~FH~~CId~WL~~~----~tCPlCR~~I~~~~ 316 (324)
.++..|.+|-+ +.++..- .|...||..|+. |... =.||-|+-.+..+.
T Consensus 13 ~~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~k~ 67 (107)
T 4gne_A 13 MHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSSA 67 (107)
T ss_dssp SSCSSCTTTCC----CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTCSB
T ss_pred CCCCCCCcCCC----CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCCCC
Confidence 45678999973 2333333 266899999998 5432 24998876665543
No 102
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=69.67 E-value=3.9 Score=29.24 Aligned_cols=50 Identities=22% Similarity=0.374 Sum_probs=32.0
Q ss_pred CCCCcccccccccc-cCCCeeEEeC-CCCccchhhHHHHHh--cCCCCcccccc
Q 020569 262 SNEDAECCICLSAY-DDGVELRELP-CGHHFHCACVDKWLY--INATCPLCKYN 311 (324)
Q Consensus 262 ~~e~~~C~ICL~~y-~~~~~lr~Lp-C~H~FH~~CId~WL~--~~~tCPlCR~~ 311 (324)
..++..|.||...- .+++.+..-- |+-.||..|+..=.. ..=.||.|+..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 34568899998764 2333443333 889999999985321 12249988653
No 103
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.44 E-value=7.2 Score=29.30 Aligned_cols=44 Identities=30% Similarity=0.648 Sum_probs=27.1
Q ss_pred CCcccccccccccCCCeeEEeCCC------CccchhhHHHHHhc----CCCCcccccccc
Q 020569 264 EDAECCICLSAYDDGVELRELPCG------HHFHCACVDKWLYI----NATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~------H~FH~~CId~WL~~----~~tCPlCR~~I~ 313 (324)
++...+||-.... ++ .+-|. .-||..|+. |.. +-.||.|+..-.
T Consensus 34 ~e~~yCiC~~~~~-g~---MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 34 NEPTYCLCHQVSY-GE---MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCCBCSTTCCBCC-SC---CCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCCcEEECCCCCC-CC---EeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 3445559987653 32 23343 469999997 433 345999976433
No 104
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.20 E-value=7.3 Score=28.10 Aligned_cols=47 Identities=26% Similarity=0.463 Sum_probs=30.6
Q ss_pred cccccccccccCCCeeEEeC-CCCccchhhHHHHHh-----cCCCCccccccc
Q 020569 266 AECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY-----INATCPLCKYNI 312 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~-----~~~tCPlCR~~I 312 (324)
..-+||-..+.++....+-- |..=||..|+.-=-. ..-.||.|+..-
T Consensus 12 ~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 34459999886444333333 778899999963221 245699998753
No 105
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=67.05 E-value=1.5 Score=36.57 Aligned_cols=47 Identities=23% Similarity=0.493 Sum_probs=31.4
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHHHh-----cCCCCcccccc
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY-----INATCPLCKYN 311 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~-----~~~tCPlCR~~ 311 (324)
++..| +|-..+.++.....-- |..-||..|+.---. ..-.||.|+..
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 34567 9999886555443433 778999999953221 24569999763
No 106
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=67.01 E-value=0.45 Score=37.38 Aligned_cols=48 Identities=21% Similarity=0.400 Sum_probs=29.8
Q ss_pred ccccccccccCCCeeEEeCCCCccchhhHHHHHhcC----CCCccccccccC
Q 020569 267 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYIN----ATCPLCKYNILK 314 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~----~tCPlCR~~I~~ 314 (324)
.|.||-..-.+++-+.=-.|...||..|+++=|... =.||.|+....+
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 111 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKE 111 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchhhc
Confidence 577887653333322222388999999999544321 239999776544
No 107
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=66.65 E-value=6.3 Score=30.49 Aligned_cols=45 Identities=27% Similarity=0.510 Sum_probs=28.0
Q ss_pred Cccccccccccc-----CCCeeEEe-CCCCccchhhHHHH------H-hcCCCCcccc
Q 020569 265 DAECCICLSAYD-----DGVELREL-PCGHHFHCACVDKW------L-YINATCPLCK 309 (324)
Q Consensus 265 ~~~C~ICL~~y~-----~~~~lr~L-pC~H~FH~~CId~W------L-~~~~tCPlCR 309 (324)
...|.+|+..=+ +++++..= .|...||..|++.+ + +.+=.||-||
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 467999997631 23344333 38899999999632 2 2234477774
No 108
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=63.66 E-value=1.6 Score=38.47 Aligned_cols=44 Identities=27% Similarity=0.521 Sum_probs=24.8
Q ss_pred cccccccccccCCCeeEEe-CCCCccchhhHHHHHhc-----CCCCccccc
Q 020569 266 AECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYI-----NATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~-----~~tCPlCR~ 310 (324)
..|.+|-..= +++.+..- -|...||..|+++=|.. .=.||.|+.
T Consensus 175 c~C~vC~~~~-~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCC-C--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCC-CCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 3688887642 23333333 38899999999954432 124999965
No 109
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=63.65 E-value=1.6 Score=31.16 Aligned_cols=47 Identities=23% Similarity=0.380 Sum_probs=30.7
Q ss_pred CCcccccccccccCCCeeEEe-CCCCccchhhHHHHH----hcCCCCcccccc
Q 020569 264 EDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWL----YINATCPLCKYN 311 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL----~~~~tCPlCR~~ 311 (324)
+...| ||-..+.+++....- .|..=||..|+.-=- ..+-.||.|+..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 34557 798887666433333 377889999986432 224569999764
No 110
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=63.41 E-value=5.1 Score=28.56 Aligned_cols=41 Identities=32% Similarity=0.704 Sum_probs=25.4
Q ss_pred cccccccccccCCCeeEEeC-----CC-CccchhhHHHHHhc----CCCCccccccc
Q 020569 266 AECCICLSAYDDGVELRELP-----CG-HHFHCACVDKWLYI----NATCPLCKYNI 312 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~Lp-----C~-H~FH~~CId~WL~~----~~tCPlCR~~I 312 (324)
...+||-.... ++ .+- |. .-||..|+. |.. +-.||.|+..-
T Consensus 16 ~~~C~C~~~~~-g~---MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 16 PTYCLCHQVSY-GE---MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCSTTCCCSC-SS---EECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCEEECCCCCC-CC---EeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 34448987643 32 333 44 579999997 433 23599997643
No 111
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=59.10 E-value=1.4 Score=32.11 Aligned_cols=44 Identities=27% Similarity=0.511 Sum_probs=25.4
Q ss_pred ccccccccccCCCeeEEe-CCCCccchhhHHHHHhcC-----CCCcccccc
Q 020569 267 ECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYIN-----ATCPLCKYN 311 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~~-----~tCPlCR~~ 311 (324)
.|.+|-..= +++.+..- .|...||..|+++=|... =.||.|+.+
T Consensus 28 ~C~vC~~~~-d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~d 77 (77)
T 3shb_A 28 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 77 (77)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC--
T ss_pred cCCccCCCC-CCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcccc
Confidence 466665442 22233222 277999999999755431 259999763
No 112
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=58.86 E-value=3.6 Score=31.26 Aligned_cols=44 Identities=25% Similarity=0.368 Sum_probs=28.2
Q ss_pred ccccccccccCCCeeEEeCCCCccchhhHHHHHhc---CCCCccccc
Q 020569 267 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYI---NATCPLCKY 310 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~---~~tCPlCR~ 310 (324)
.-|||-....++.-+.-=.|.--||..|+..=+.. .-.||.|+.
T Consensus 29 vrCiC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 29 TRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CCCTTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred EEeECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 33489877666543322238899999998753221 246999974
No 113
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=57.42 E-value=4.4 Score=31.52 Aligned_cols=44 Identities=30% Similarity=0.518 Sum_probs=27.3
Q ss_pred ccccccccccc------CCCeeEEe-CCCCccchhhHHHHHh-------cCCCCcccc
Q 020569 266 AECCICLSAYD------DGVELREL-PCGHHFHCACVDKWLY-------INATCPLCK 309 (324)
Q Consensus 266 ~~C~ICL~~y~------~~~~lr~L-pC~H~FH~~CId~WL~-------~~~tCPlCR 309 (324)
+.|.+|+..-. +++++..- .|...||..|++...+ ..=.||.|+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 46999987542 12333333 3889999999986632 233477663
No 114
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=56.94 E-value=6.2 Score=41.85 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=43.4
Q ss_pred CCCcccccccccccCCCeeEEeCCC-CccchhhHHHHHhcCCCCccccccccCC
Q 020569 263 NEDAECCICLSAYDDGVELRELPCG-HHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
.+.-.|+|=++-+.|+ ..+|-+ |.|-..+|.+||..+.+||.=|.++...
T Consensus 889 P~~F~cPIs~~lM~DP---VilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~ 939 (968)
T 3m62_A 889 PDEFLDPLMYTIMKDP---VILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLE 939 (968)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGG
T ss_pred cHHhCCcchhhHHhCC---eEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcc
Confidence 4557899999999998 789987 6899999999999999999998887653
No 115
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=55.86 E-value=9.7 Score=31.01 Aligned_cols=45 Identities=22% Similarity=0.372 Sum_probs=30.0
Q ss_pred CCCcccccccccccCCCeeEEeCCCCccchhhHHHHHh-----------cCCCCccccc
Q 020569 263 NEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY-----------INATCPLCKY 310 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~-----------~~~tCPlCR~ 310 (324)
..+..|.+|-+. ++-+--=.|...||..||++=+. ..=.||.|+.
T Consensus 61 g~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 61 GMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 345789999754 43222223779999999997652 1234999974
No 116
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=54.49 E-value=1.4 Score=31.14 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=25.9
Q ss_pred cccccccccccCCCeeEEe---CCCCccchhhHHHHH---h-----cCCCCccccc
Q 020569 266 AECCICLSAYDDGVELREL---PCGHHFHCACVDKWL---Y-----INATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L---pC~H~FH~~CId~WL---~-----~~~tCPlCR~ 310 (324)
..-+||-....++.- ..- .|+.=||..|+.-=- + .+-.||.||.
T Consensus 10 ~v~C~C~~~~~~g~m-I~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRCICSSTMVNDSM-IQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECCTTCCCSCCSCE-EECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEeECCCCcCCCCE-EEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 344589766555542 233 266779999983210 0 1345999974
No 117
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=52.89 E-value=2.8 Score=28.83 Aligned_cols=41 Identities=34% Similarity=0.702 Sum_probs=24.6
Q ss_pred cccccccccccCCCeeEEe-C--CC-CccchhhHHHHHhc----CCCCccccc
Q 020569 266 AECCICLSAYDDGVELREL-P--CG-HHFHCACVDKWLYI----NATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L-p--C~-H~FH~~CId~WL~~----~~tCPlCR~ 310 (324)
...+||-... +++ ...- . |. .-||..|+. |.. +-.||.|+.
T Consensus 9 ~~yC~C~~~~-~g~-mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 9 PTYCLCHQVS-YGE-MIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CEETTTTEEC-CSE-EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CcEEECCCCC-CCC-eeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 4455998764 342 2111 2 44 589999998 433 235999964
No 118
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=50.98 E-value=2.9 Score=28.75 Aligned_cols=39 Identities=33% Similarity=0.745 Sum_probs=24.4
Q ss_pred cccccccccccCCCeeEEeCCC------CccchhhHHHHHhc----CCCCccccc
Q 020569 266 AECCICLSAYDDGVELRELPCG------HHFHCACVDKWLYI----NATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~------H~FH~~CId~WL~~----~~tCPlCR~ 310 (324)
...+||-... +++ .+-|. .-||..|+. |.. +-.||.|+.
T Consensus 10 ~~~C~C~~~~-~g~---mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 10 PTYCLCHQVS-YGE---MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CEETTTTEEC-CSE---EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCEEECCCcC-CCC---EEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 4555998764 232 33333 479999998 443 234999964
No 119
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=49.19 E-value=3.8 Score=28.97 Aligned_cols=46 Identities=15% Similarity=0.382 Sum_probs=28.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHh---cCCCCccccc
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLY---INATCPLCKY 310 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~---~~~tCPlCR~ 310 (324)
+...| ||-..+.++.-+.--.|..=||..|+.-=-. ..-.||.|+.
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 34556 9988766332222223778899999864221 2345888864
No 120
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=48.50 E-value=42 Score=25.07 Aligned_cols=50 Identities=22% Similarity=0.387 Sum_probs=34.5
Q ss_pred CCccccccccccc---CCCeeEEe-CCCCccchhhHHHHHh-cCCCCcccccccc
Q 020569 264 EDAECCICLSAYD---DGVELREL-PCGHHFHCACVDKWLY-INATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~---~~~~lr~L-pC~H~FH~~CId~WL~-~~~tCPlCR~~I~ 313 (324)
....|.||=++.. +++....- -|+--.+..|.+-=.+ .++.||-|+..+.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 4478999998864 34322111 2556678999876554 5899999999886
No 121
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=48.34 E-value=9.8 Score=27.40 Aligned_cols=49 Identities=16% Similarity=0.320 Sum_probs=29.8
Q ss_pred CcccccccccccCCCeeEEe--CCCCccchhhHHHHHh---------cCCCCccccccccC
Q 020569 265 DAECCICLSAYDDGVELREL--PCGHHFHCACVDKWLY---------INATCPLCKYNILK 314 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~L--pC~H~FH~~CId~WL~---------~~~tCPlCR~~I~~ 314 (324)
...| ||-....++.-+.-= .|..=||..|+.-=-. .+-.||.|+..-.+
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 3455 898875444322222 4888899999963211 24569999875433
No 122
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.60 E-value=18 Score=25.27 Aligned_cols=41 Identities=17% Similarity=0.416 Sum_probs=31.5
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|.-|-..+.+++.+. .-+..||.+| .+|..|+.++...
T Consensus 9 ~~~C~~C~~~I~~~~~v~--a~~~~~H~~C--------F~C~~C~~~L~~~ 49 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVS--SLGKDWHKFC--------LKCERCSKTLTPG 49 (76)
T ss_dssp CCBCTTTCCBCCTTTEEE--ETTEEEETTT--------CBCSSSCCBCCTT
T ss_pred CCCCcCCCCEeECCeEEE--ECCeEeeCCC--------CCCCCCCCccCCC
Confidence 467999999998777554 4578899887 4588998888743
No 123
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=45.83 E-value=4.3 Score=31.23 Aligned_cols=44 Identities=18% Similarity=0.477 Sum_probs=27.2
Q ss_pred ccccccccccCCCeeEEe-CCCCccchhhHHHHHhc----CCCCcccccc
Q 020569 267 ECCICLSAYDDGVELREL-PCGHHFHCACVDKWLYI----NATCPLCKYN 311 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~~----~~tCPlCR~~ 311 (324)
.|.+|-..-.+. .+..- .|...||..|+++=|.. .-.||.|+.-
T Consensus 56 ~C~~C~~~~~~~-~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 56 VCQNCKQSGEDS-KMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp CCTTTCCCSCCT-TEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred cccccCccCCCC-CeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 466776553332 23222 37899999999864442 2349999654
No 124
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=45.24 E-value=5.9 Score=28.19 Aligned_cols=21 Identities=33% Similarity=0.512 Sum_probs=14.2
Q ss_pred HHHHHhcCCCCccccccccCC
Q 020569 295 VDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 295 Id~WL~~~~tCPlCR~~I~~~ 315 (324)
+|+||..--.||.||.++.-.
T Consensus 1 md~~LLeiL~CP~ck~~L~~~ 21 (69)
T 2pk7_A 1 MDTKLLDILACPICKGPLKLS 21 (69)
T ss_dssp --CCGGGTCCCTTTCCCCEEC
T ss_pred CChHHHhheeCCCCCCcCeEe
Confidence 356777777888888877643
No 125
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.03 E-value=21 Score=25.47 Aligned_cols=43 Identities=23% Similarity=0.471 Sum_probs=31.4
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS 316 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 316 (324)
....|.-|-..+.+.+.+. .=+..||.+| .+|-.|+..+....
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~C--------F~C~~C~~~L~~~~ 56 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSC--------FRCHTCEATLWPGG 56 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTT--------CBCSSSCCBCCTTS
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCc--------CEEcCCCCCcCCCc
Confidence 4468999999988777654 3578899888 45778887776543
No 126
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=43.19 E-value=12 Score=26.28 Aligned_cols=12 Identities=17% Similarity=0.409 Sum_probs=5.3
Q ss_pred cccccccccccC
Q 020569 266 AECCICLSAYDD 277 (324)
Q Consensus 266 ~~C~ICL~~y~~ 277 (324)
-.|..|-..+.+
T Consensus 28 F~C~~C~~~L~~ 39 (76)
T 1iml_A 28 LKCEKCGKTLTS 39 (76)
T ss_dssp CBCTTTCCBCCT
T ss_pred CCccccCccCCC
Confidence 344444444433
No 127
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=42.18 E-value=8.6 Score=27.46 Aligned_cols=48 Identities=27% Similarity=0.445 Sum_probs=31.1
Q ss_pred CcccccccccccCCCeeEEe-CCCCccchhhHHHHHh-----cCCCCccccccc
Q 020569 265 DAECCICLSAYDDGVELREL-PCGHHFHCACVDKWLY-----INATCPLCKYNI 312 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL~-----~~~tCPlCR~~I 312 (324)
...-+||-..+.++....+- .|.-=||..|+.---. ..-.||.|+..-
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 35667998887644433333 3778899999954321 235699997653
No 128
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=40.38 E-value=27 Score=27.86 Aligned_cols=45 Identities=27% Similarity=0.513 Sum_probs=29.1
Q ss_pred CCCcccccccccccCCCeeEEe-CCCCccchhhHHHHH------hc-----CCCCcccccc
Q 020569 263 NEDAECCICLSAYDDGVELREL-PCGHHFHCACVDKWL------YI-----NATCPLCKYN 311 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~L-pC~H~FH~~CId~WL------~~-----~~tCPlCR~~ 311 (324)
..+..|.+|-+. + ++.-- .|...||.+||++=+ +. .=.|++|+..
T Consensus 55 g~~~~C~vC~dG---G-~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 55 GMDEQCRWCAEG---G-NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SCBSSCTTTCCC---S-EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCcCeecCCC---C-eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 345679999754 3 22222 267999999999742 22 1359999654
No 129
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.08 E-value=38 Score=24.39 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=29.5
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
....|.-|-..+. ++.+ ..-+..||.+| ..|-.|+.+|...
T Consensus 24 ~~~~C~~C~~~I~-~~~v--~a~~~~~H~~C--------F~C~~C~~~L~~~ 64 (90)
T 2dar_A 24 RTPMCAHCNQVIR-GPFL--VALGKSWHPEE--------FNCAHCKNTMAYI 64 (90)
T ss_dssp CCCBBSSSCCBCC-SCEE--EETTEEECTTT--------CBCSSSCCBCSSS
T ss_pred CCCCCccCCCEec-ceEE--EECCccccccC--------CccCCCCCCCCCC
Confidence 3468999999885 3333 34578999887 4688898888643
No 130
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=39.98 E-value=4.8 Score=28.53 Aligned_cols=19 Identities=26% Similarity=0.186 Sum_probs=13.1
Q ss_pred HHHHhcCCCCccccccccC
Q 020569 296 DKWLYINATCPLCKYNILK 314 (324)
Q Consensus 296 d~WL~~~~tCPlCR~~I~~ 314 (324)
|+||..--.||+||.++.-
T Consensus 4 d~~LLeiL~CP~ck~~L~~ 22 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPLRY 22 (67)
T ss_dssp CGGGTCCCBCTTTCCBCEE
T ss_pred CHHHHHHhCCCCCCCcCeE
Confidence 4566666778888777654
No 131
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.91 E-value=25 Score=24.95 Aligned_cols=40 Identities=20% Similarity=0.534 Sum_probs=30.7
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
....|.-|-..+.+++.+.. -+..||.+| ..|-.|+.++.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a--~~~~wH~~C--------F~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLA--LDKQWHVSC--------FKCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEE--TTEEECTTT--------CBCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCCeEEEE--CCccccccc--------CCcCcCCCCcC
Confidence 34679999999887776654 468899887 45888988775
No 132
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=39.72 E-value=20 Score=33.86 Aligned_cols=46 Identities=20% Similarity=0.427 Sum_probs=29.4
Q ss_pred cccccccccccCCCeeEEeCCCCc--cchhhHHHHHhc--CCCCcccccccc
Q 020569 266 AECCICLSAYDDGVELRELPCGHH--FHCACVDKWLYI--NATCPLCKYNIL 313 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~--FH~~CId~WL~~--~~tCPlCR~~I~ 313 (324)
..|++=...+.. .+|-..|.|. |=.+=+-...+. .-.||+|.+.+.
T Consensus 250 L~CPlS~~ri~~--PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 250 LQCPISYTRMKY--PSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp SBCTTTSSBCSS--EEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred ecCCCccccccc--cCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccC
Confidence 478877766544 5788899997 554332222222 355999988763
No 133
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.36 E-value=26 Score=24.62 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=29.3
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
....|.-|-..+.+. .+..-+..||.+|. +|-.|+..|..
T Consensus 14 ~~~~C~~C~~~I~~~---~~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (79)
T 1x62_A 14 KLPMCDKCGTGIVGV---FVKLRDRHRHPECY--------VCTDCGTNLKQ 53 (79)
T ss_dssp CCCCCSSSCCCCCSS---CEECSSCEECTTTT--------SCSSSCCCHHH
T ss_pred CCCccccCCCCccCc---EEEECcceeCcCcC--------eeCCCCCCCCC
Confidence 346899999988763 23446789999884 58888887753
No 134
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=38.09 E-value=6.4 Score=27.23 Aligned_cols=41 Identities=29% Similarity=0.668 Sum_probs=24.5
Q ss_pred cccccccccccCCCeeEEe-C--CC-CccchhhHHHHHhc----CCCCccccc
Q 020569 266 AECCICLSAYDDGVELREL-P--CG-HHFHCACVDKWLYI----NATCPLCKY 310 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~L-p--C~-H~FH~~CId~WL~~----~~tCPlCR~ 310 (324)
...+||-... +++ ...- . |. .-||..|+. |.. +-.||.|+.
T Consensus 11 ~~yC~C~~~~-~g~-MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 11 PTYCLCNQVS-YGE-MIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CEETTTTEEC-CSE-EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CcEEECCCCC-CCC-eeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 4455998763 342 2221 2 33 689999997 332 345999965
No 135
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=37.62 E-value=22 Score=33.41 Aligned_cols=47 Identities=19% Similarity=0.267 Sum_probs=30.3
Q ss_pred cccccccccccCCCeeEEeCCCCc--cchhhHHHHHhc--CCCCccccccccC
Q 020569 266 AECCICLSAYDDGVELRELPCGHH--FHCACVDKWLYI--NATCPLCKYNILK 314 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~--FH~~CId~WL~~--~~tCPlCR~~I~~ 314 (324)
..|+|=...++. .+|-..|.|. |=.+=.-...+. .-.||+|.+.+..
T Consensus 216 L~CPlS~~ri~~--P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 216 LMCPLGKMRLTI--PCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp SBCTTTCSBCSS--EEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred eeCCCccceecc--CCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 468877666644 5788899998 654333332222 3459999987753
No 136
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=37.22 E-value=39 Score=21.73 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=14.2
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhhhhhhcccc
Q 020569 56 PNMPLRLWIVGYAIQCVLHMVCVCVEYKRRSR 87 (324)
Q Consensus 56 p~~Pl~~WivgY~~~c~~~~~l~~~~~~~r~~ 87 (324)
+++|.-+=-+..++..++.+.+++|-|.||++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 45553222233333344444455555655544
No 137
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.98 E-value=11 Score=25.98 Aligned_cols=20 Identities=30% Similarity=0.803 Sum_probs=14.3
Q ss_pred HHhc-CCCCccccccccCCCC
Q 020569 298 WLYI-NATCPLCKYNILKSSS 317 (324)
Q Consensus 298 WL~~-~~tCPlCR~~I~~~~~ 317 (324)
|++. ...||-|+..|.+.+.
T Consensus 1 wi~~~~k~CP~C~~~Iek~~G 21 (60)
T 1wd2_A 1 WIAANTKECPKCHVTIEKDGG 21 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSCCS
T ss_pred CccccceECcCCCCeeEeCCC
Confidence 4443 3679999999987654
No 138
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=36.85 E-value=3.6 Score=25.21 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=10.4
Q ss_pred CcccccccccccCCCe
Q 020569 265 DAECCICLSAYDDGVE 280 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~ 280 (324)
.-.|+||+.++...+.
T Consensus 5 GFiCP~C~~~l~s~~~ 20 (34)
T 3mjh_B 5 GFICPQCMKSLGSADE 20 (34)
T ss_dssp EEECTTTCCEESSHHH
T ss_pred ccCCcHHHHHcCCHHH
Confidence 3568888777765543
No 139
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.87 E-value=28 Score=23.84 Aligned_cols=40 Identities=18% Similarity=0.487 Sum_probs=28.6
Q ss_pred cccccccccccC--CCeeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 266 AECCICLSAYDD--GVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 266 ~~C~ICL~~y~~--~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
..|.-|-..+.+ ++++ +..-+..||.+| .+|-.|+.++..
T Consensus 6 ~~C~~C~~~I~~~~~~~~-~~a~~~~wH~~C--------F~C~~C~~~L~~ 47 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKY-ISFEERQWHNDC--------FNCKKCSLSLVG 47 (72)
T ss_dssp CSBTTTTBCCCCSSSCSC-EECSSCEECTTT--------CBCSSSCCBCTT
T ss_pred CCCcCCCccccCCCCcce-EEECCcccCccc--------CEeccCCCcCCC
Confidence 579999888886 3333 233678999888 368888888753
No 140
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.61 E-value=90 Score=22.32 Aligned_cols=41 Identities=22% Similarity=0.478 Sum_probs=29.6
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|.-|-..+.+.+.+ ..-+..||.+| ..|-.|+.+|...
T Consensus 15 ~~~C~~C~~~I~~~~~v--~a~~~~~H~~C--------F~C~~C~~~L~~~ 55 (91)
T 2d8y_A 15 RETCVECQKTVYPMERL--LANQQVFHISC--------FRCSYCNNKLSLG 55 (91)
T ss_dssp SCBCTTTCCBCCTTSEE--ECSSSEEETTT--------CBCTTTCCBCCTT
T ss_pred CCcCccCCCccCCceeE--EECCCEECCCC--------CeeCCCCCCCCCC
Confidence 46799999888877644 45678899887 3477777776654
No 141
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=30.74 E-value=8.8 Score=29.62 Aligned_cols=24 Identities=33% Similarity=0.768 Sum_probs=15.4
Q ss_pred CCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 285 PCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 285 pC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
.|++.| .+=+.....||.|++.=.
T Consensus 72 ~CG~~F-----~~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 72 KCGFVF-----KAEINIPSRCPKCKSEWI 95 (105)
T ss_dssp TTCCBC-----CCCSSCCSSCSSSCCCCB
T ss_pred hCcCee-----cccCCCCCCCcCCCCCcc
Confidence 477888 111344578999988543
No 142
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=30.60 E-value=72 Score=22.96 Aligned_cols=51 Identities=16% Similarity=0.358 Sum_probs=33.2
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHHHh--------cCCCCccccccccC
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY--------INATCPLCKYNILK 314 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~--------~~~tCPlCR~~I~~ 314 (324)
+...|.+|-..|.--..-.--. |+++|..+|-..... ....|-.|-..+..
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 79 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRS 79 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHT
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhh
Confidence 4568999999998654333334 899999999776532 12346666554433
No 143
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=30.45 E-value=27 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=22.7
Q ss_pred CCccccccccccc-CCCeeEEe-CCCCccchhhHH
Q 020569 264 EDAECCICLSAYD-DGVELREL-PCGHHFHCACVD 296 (324)
Q Consensus 264 e~~~C~ICL~~y~-~~~~lr~L-pC~H~FH~~CId 296 (324)
++..|.+|...|. -...-+.- .|+|.++..|=.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 4578999999994 22222343 499999988844
No 144
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=29.33 E-value=82 Score=22.45 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=30.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 264 EDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
....|.-|-..+.+ +. ...-+..||.+| ..|-.|+..|...
T Consensus 24 ~~~~C~~C~~~I~~-~~--~~a~~~~~H~~C--------F~C~~C~~~L~~~ 64 (89)
T 1x64_A 24 RMPLCDKCGSGIVG-AV--VKARDKYRHPEC--------FVCADCNLNLKQK 64 (89)
T ss_dssp SCCBCTTTCCBCCS-CC--EESSSCEECTTT--------CCCSSSCCCTTTS
T ss_pred cCCCcccCCCEecc-cE--EEECCceECccC--------CEecCCCCCCCCC
Confidence 34679999988885 22 334678999888 4588898888654
No 145
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.17 E-value=54 Score=22.54 Aligned_cols=42 Identities=19% Similarity=0.503 Sum_probs=29.9
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|.-|-..+..++.+.. .-+..||.+| .+|-.|+.++..+
T Consensus 11 ~~~C~~C~~~I~~~~~~~~-a~~~~~H~~C--------F~C~~C~~~L~~~ 52 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVN-SNGELYHEQC--------FVCAQCFQQFPEG 52 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEE-ETTEEECTTT--------CCCTTTCCCCGGG
T ss_pred CCCchhcCCccCCCceEEE-eCccEecccc--------CeECCCCCCCCCC
Confidence 4679999998876554422 2467889877 4588888887654
No 146
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=29.16 E-value=6.1 Score=26.89 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=14.4
Q ss_pred HHHHhcCCCCccccccccC
Q 020569 296 DKWLYINATCPLCKYNILK 314 (324)
Q Consensus 296 d~WL~~~~tCPlCR~~I~~ 314 (324)
|+||..--.||.||.++..
T Consensus 4 d~~lL~iL~CP~c~~~L~~ 22 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEE 22 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEE
T ss_pred CHHHHhheeCCCCCCccee
Confidence 4566667789999998654
No 147
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.90 E-value=59 Score=22.01 Aligned_cols=39 Identities=18% Similarity=0.384 Sum_probs=24.4
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCcccccccc
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 313 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~ 313 (324)
..|.-|-..+..++.. ...=+..||.+| .+|-.|+.++.
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~C--------F~C~~C~~~L~ 44 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAG-VVALDRVFHVGC--------FVCSTCRAQLR 44 (72)
T ss_dssp CCCSSSCSCCCSSSCC-EECSSSEECTTT--------CBCSSSCCBCT
T ss_pred CCCccCCCccCCCceE-EEECCCeEcccC--------CcccccCCcCC
Confidence 4688887776654322 223467788776 35777777774
No 148
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=28.32 E-value=51 Score=21.22 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=8.3
Q ss_pred HHHHHHhhhhhhhcccc
Q 020569 71 CVLHMVCVCVEYKRRSR 87 (324)
Q Consensus 71 c~~~~~l~~~~~~~r~~ 87 (324)
.++.+.+++|-|+||++
T Consensus 22 ~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 22 ILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 33344455555555544
No 149
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=27.79 E-value=12 Score=21.81 Aligned_cols=13 Identities=31% Similarity=0.904 Sum_probs=9.0
Q ss_pred CCCCccccccccC
Q 020569 302 NATCPLCKYNILK 314 (324)
Q Consensus 302 ~~tCPlCR~~I~~ 314 (324)
+.+||+||.....
T Consensus 3 k~~CpvCk~q~Pd 15 (28)
T 2jvx_A 3 DFCCPKCQYQAPD 15 (28)
T ss_dssp CEECTTSSCEESS
T ss_pred cccCccccccCcC
Confidence 4569999876543
No 150
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=26.98 E-value=34 Score=23.06 Aligned_cols=41 Identities=20% Similarity=0.531 Sum_probs=30.6
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
..|.-|-..+..++.+.. .=+..||.+|. .|-.|+.++..+
T Consensus 12 ~~C~~C~~~i~~~e~~~~-~~~~~~H~~CF--------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 12 ATCERCKGGFAPAEKIVN-SNGELYHEQCF--------VCAQCFQQFPEG 52 (72)
T ss_dssp CBCTTTCCBCCTTCEEEE-ETTEEEETTTS--------SCTTTCCCCGGG
T ss_pred ccchhcCccccCCceEEE-eCcCeeCcCCC--------cccCCCCCCCCC
Confidence 579999999887775432 34678998885 688888887654
No 151
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=26.33 E-value=7.1 Score=27.69 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=14.5
Q ss_pred HHHHhcCCCCccccccccCC
Q 020569 296 DKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 296 d~WL~~~~tCPlCR~~I~~~ 315 (324)
|+||..--.||.||.++.-.
T Consensus 2 d~~LL~iL~CP~ck~~L~~~ 21 (68)
T 2jr6_A 2 EKKFLDILVCPVTKGRLEYH 21 (68)
T ss_dssp CCSSSCCCBCSSSCCBCEEE
T ss_pred ChHHhhheECCCCCCcCeEe
Confidence 34666667899999887654
No 152
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=26.22 E-value=19 Score=25.45 Aligned_cols=41 Identities=24% Similarity=0.559 Sum_probs=29.1
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|..|-..+.+++.++ .-+..||.+|. +|-.|+.++...
T Consensus 7 ~~~C~~C~~~I~~~~~~~--a~~~~~H~~CF--------~C~~C~~~L~~~ 47 (81)
T 1a7i_A 7 GNKCGACGRTVYHAEEVQ--CDGRSFHRCCF--------LCMVCRKNLDST 47 (81)
T ss_dssp -CBCSSSCCBCSSTTEEE--ETTEEEESSSE--------ECSSSCCEECSS
T ss_pred CCcCcCcCccccCceeEE--eCCcccccccC--------ccCCCCCCCCCC
Confidence 357999998887776543 35788888773 478888877654
No 153
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=26.17 E-value=26 Score=24.04 Aligned_cols=41 Identities=24% Similarity=0.510 Sum_probs=28.8
Q ss_pred cccccccccccCCCeeEEeC-CCCccchhhHHHHHh-cCCCCccc
Q 020569 266 AECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY-INATCPLC 308 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~-~~~tCPlC 308 (324)
..|--|...+.+... ..-| |+++|..+| |.... .=..||-|
T Consensus 16 ~~C~~C~~~~~~~~~-y~C~~C~~~FC~dC-D~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHV-YVCAVCQNVFCVDC-DVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEE-ECCTTTTCCBCHHH-HHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCcc-EECCccCcCcccch-hHHHHhhccCCcCC
Confidence 359999999865432 2344 999999999 55443 34679988
No 154
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.98 E-value=10 Score=26.92 Aligned_cols=42 Identities=31% Similarity=0.661 Sum_probs=25.6
Q ss_pred cccccccccccCCCeeEEeCCC------CccchhhHHHHHhc----CCCCcccccccc
Q 020569 266 AECCICLSAYDDGVELRELPCG------HHFHCACVDKWLYI----NATCPLCKYNIL 313 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~------H~FH~~CId~WL~~----~~tCPlCR~~I~ 313 (324)
..-+||-... +++ .+-|. .-||..|+. |.. +-.||.|+....
T Consensus 6 ~~yC~C~~~~-~g~---MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~~ 57 (70)
T 1x4i_A 6 SGYCICNQVS-YGE---MVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAMK 57 (70)
T ss_dssp CCCSTTSCCC-CSS---EECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHHH
T ss_pred CeEEEcCCCC-CCC---EeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcccc
Confidence 3445787763 332 23333 579999997 322 234999987654
No 155
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.62 E-value=35 Score=23.17 Aligned_cols=40 Identities=18% Similarity=0.404 Sum_probs=27.5
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|.-|-..+.+ +.+ ..-+..||.+|. +|-.|+.+|...
T Consensus 5 ~~~C~~C~~~I~~-~~~--~a~~~~~H~~CF--------~C~~C~~~L~~~ 44 (70)
T 2d8x_A 5 SSGCHQCGEFIIG-RVI--KAMNNSWHPECF--------RCDLCQEVLADI 44 (70)
T ss_dssp SSBCSSSCCBCCS-CCE--EETTEEECTTTS--------BCSSSCCBCSSS
T ss_pred CCcCccCCCEecc-eEE--EECcccccccCC--------EeCCCCCcCCCC
Confidence 3578888888774 333 234678888873 588888877654
No 156
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=24.96 E-value=15 Score=24.10 Aligned_cols=44 Identities=16% Similarity=0.418 Sum_probs=26.6
Q ss_pred ccccccccccCCCeeEEeCCCCccchhhHHHHHh---cCCCCccccc
Q 020569 267 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLY---INATCPLCKY 310 (324)
Q Consensus 267 ~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~---~~~tCPlCR~ 310 (324)
.=+||-..+.++.-+.--.|+.=||..|+.-=-. .+-.||.|+.
T Consensus 5 ~~C~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp BCSTTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred eEEEeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 3457877665333222223778899999864221 2456988864
No 157
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=24.79 E-value=6.8 Score=27.79 Aligned_cols=17 Identities=29% Similarity=0.510 Sum_probs=9.4
Q ss_pred HHhcCCCCccccccccC
Q 020569 298 WLYINATCPLCKYNILK 314 (324)
Q Consensus 298 WL~~~~tCPlCR~~I~~ 314 (324)
||..--.||.||.++.-
T Consensus 4 ~LL~iL~CP~ck~~L~~ 20 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVF 20 (68)
T ss_dssp CCEEECBCTTTCCBCEE
T ss_pred HHhhheECCCCCCcCeE
Confidence 44444556777666543
No 158
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.58 E-value=83 Score=21.18 Aligned_cols=41 Identities=20% Similarity=0.363 Sum_probs=28.8
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
..|.-|-..+.+++++ ...-+..||.+| .+|-.|+.++...
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~C--------F~C~~C~~~L~~~ 46 (72)
T 1wyh_A 6 SGCSACGETVMPGSRK-LEYGGQTWHEHC--------FLCSGCEQPLGSR 46 (72)
T ss_dssp CBCSSSCCBCCSSSCE-ECSTTCCEETTT--------CBCTTTCCBTTTS
T ss_pred CCCccCCCccccCccE-EEECccccCccc--------CeECCCCCcCCCC
Confidence 5788998888865433 333578899877 3588888877653
No 159
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=24.32 E-value=51 Score=23.15 Aligned_cols=31 Identities=29% Similarity=0.680 Sum_probs=24.0
Q ss_pred CCCcccccccccccCCCeeEEeCC-CCccchhhHHH
Q 020569 263 NEDAECCICLSAYDDGVELRELPC-GHHFHCACVDK 297 (324)
Q Consensus 263 ~e~~~C~ICL~~y~~~~~lr~LpC-~H~FH~~CId~ 297 (324)
++..-|+||.++ ..+|-+.| +-.|+..|..+
T Consensus 6 ee~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE 37 (67)
T 2d8v_A 6 SGLPWCCICNED----ATLRCAGCDGDLYCARCFRE 37 (67)
T ss_dssp CCCSSCTTTCSC----CCEEETTTTSEEECSSHHHH
T ss_pred cCCCeeEEeCCC----CeEEecCCCCceehHHHHHH
Confidence 455789999876 55888889 58899999655
No 160
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.67 E-value=77 Score=22.02 Aligned_cols=41 Identities=29% Similarity=0.423 Sum_probs=30.2
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
..|.-|-..+..++.+ +..=+..||.+| .+|-.|+.++..+
T Consensus 16 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~C--------F~C~~C~~~L~~~ 56 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQN-VEYKGTVWHKDC--------FTCSNCKQVIGTG 56 (82)
T ss_dssp CBCSSSCCBCCSSSCE-EECSSCEEETTT--------CCCSSSCCCCTTS
T ss_pred CcCccCCcccccCceE-EEECcccccccc--------CchhhCCCccCCC
Confidence 5799999988876653 233578899887 3588888887654
No 161
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.64 E-value=87 Score=22.50 Aligned_cols=35 Identities=20% Similarity=0.423 Sum_probs=24.6
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHH
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKW 298 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~W 298 (324)
+...|.+|-.+|.--..-.--. |+++|...|-..-
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 3468999999996543323333 8999999996543
No 162
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=23.61 E-value=7.1 Score=27.86 Aligned_cols=16 Identities=31% Similarity=0.553 Sum_probs=8.0
Q ss_pred HHhcCCCCcccccccc
Q 020569 298 WLYINATCPLCKYNIL 313 (324)
Q Consensus 298 WL~~~~tCPlCR~~I~ 313 (324)
||..--.||.||.++.
T Consensus 4 ~LL~iL~CP~ck~~L~ 19 (70)
T 2js4_A 4 RLLDILVCPVCKGRLE 19 (70)
T ss_dssp CCCCCCBCTTTCCBEE
T ss_pred HHhhheECCCCCCcCE
Confidence 3333445666665544
No 163
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.57 E-value=70 Score=22.36 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=28.2
Q ss_pred CcccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 265 DAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
...|.-|-..+. ++.+ ..-+..||.+| .+|-.|+.+|...
T Consensus 15 ~~~C~~C~~~I~-~~~v--~a~~~~~H~~C--------F~C~~C~~~L~~~ 54 (79)
T 2cor_A 15 KYICQKCHAIID-EQPL--IFKNDPYHPDH--------FNCANCGKELTAD 54 (79)
T ss_dssp CCBCTTTCCBCC-SCCC--CCSSSCCCTTT--------SBCSSSCCBCCTT
T ss_pred CCCCccCCCEec-ceEE--EECcceeCCCC--------CEeCCCCCccCCC
Confidence 467999988887 3322 33578889877 4688888887654
No 164
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.29 E-value=88 Score=20.93 Aligned_cols=38 Identities=18% Similarity=0.478 Sum_probs=27.1
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccC
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 314 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 314 (324)
..|.-|-..+.++ . +..-+..||.+| .+|-.|+.++..
T Consensus 6 ~~C~~C~~~I~~~-~--~~a~~~~~H~~C--------F~C~~C~~~L~~ 43 (70)
T 2d8z_A 6 SGCVQCKKPITTG-G--VTYREQPWHKEC--------FVCTACRKQLSG 43 (70)
T ss_dssp CBCSSSCCBCCSS-E--EESSSSEEETTT--------SBCSSSCCBCTT
T ss_pred CCCcccCCeeccc-e--EEECccccCCCC--------CccCCCCCcCCc
Confidence 5688888888743 2 344678899887 358888888754
No 165
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=23.25 E-value=56 Score=23.96 Aligned_cols=53 Identities=17% Similarity=0.352 Sum_probs=34.9
Q ss_pred CCcccccccccccCCCeeEEeC-CCCccchhhHHHHHh-------cCCCCccccccccCCC
Q 020569 264 EDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY-------INATCPLCKYNILKSS 316 (324)
Q Consensus 264 e~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~-------~~~tCPlCR~~I~~~~ 316 (324)
+...|.+|-..|.--..-.--. |+++|...|...... ....|-.|-..+....
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~~ 68 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRGS 68 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHCC
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhcc
Confidence 4468999999988654333333 899999999766432 2245777766555433
No 166
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.70 E-value=68 Score=21.63 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=28.7
Q ss_pred cccccccccccCCCeeEEeCCCCccchhhHHHHHhcCCCCccccccccCC
Q 020569 266 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 315 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~LpC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 315 (324)
..|.-|-..+.+++.+. ..=+..||.+| .+|-.|+.++...
T Consensus 6 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~C--------F~C~~C~~~L~~~ 46 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKM-EYKGSSWHETC--------FICHRCQQPIGTK 46 (72)
T ss_dssp CCBSSSCCCCCSSSCEE-EETTEEEETTT--------TCCSSSCCCCCSS
T ss_pred CCCccCCCcccCCceEE-EECcCeecccC--------CcccccCCccCCC
Confidence 46999988888765432 22467888877 4588888877654
No 167
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=22.49 E-value=62 Score=22.67 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=23.9
Q ss_pred CcccccccccccCCCeeEEeC-CCCccchhhHHH
Q 020569 265 DAECCICLSAYDDGVELRELP-CGHHFHCACVDK 297 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~ 297 (324)
+..|.+|-..|.--..-.--. |+++|..+|-..
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 358999999987554333333 899999999654
No 168
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=22.07 E-value=26 Score=19.26 Aligned_cols=8 Identities=50% Similarity=0.654 Sum_probs=5.1
Q ss_pred ccccchhh
Q 020569 24 AYSKPVVV 31 (324)
Q Consensus 24 ~~s~~~v~ 31 (324)
.|||||++
T Consensus 10 tcskpwlv 17 (26)
T 1loi_A 10 TCSKPWLV 17 (26)
T ss_dssp TSSCTTGG
T ss_pred hcCCchhh
Confidence 36777764
No 169
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=21.84 E-value=35 Score=25.99 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=10.5
Q ss_pred ccchhhHHHHHh
Q 020569 289 HFHCACVDKWLY 300 (324)
Q Consensus 289 ~FH~~CId~WL~ 300 (324)
.|+..|+.+|++
T Consensus 42 GFCRNCLskWy~ 53 (105)
T 2o35_A 42 GFCRNCLSNWYR 53 (105)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 589999999985
No 170
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=21.64 E-value=35 Score=25.91 Aligned_cols=12 Identities=42% Similarity=1.049 Sum_probs=10.6
Q ss_pred ccchhhHHHHHh
Q 020569 289 HFHCACVDKWLY 300 (324)
Q Consensus 289 ~FH~~CId~WL~ 300 (324)
.|+..|+.+|+.
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 589999999986
No 171
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=21.60 E-value=19 Score=34.92 Aligned_cols=47 Identities=28% Similarity=0.448 Sum_probs=31.4
Q ss_pred cccccccccccCCCeeEEeC-CCCccchhhHHHHHh-----cCCCCccccccc
Q 020569 266 AECCICLSAYDDGVELRELP-CGHHFHCACVDKWLY-----INATCPLCKYNI 312 (324)
Q Consensus 266 ~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL~-----~~~tCPlCR~~I 312 (324)
...|||-..+.++.....-- |.-=||..|+.-=-. .+-.||.|+..-
T Consensus 5 ~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 56889998886444443433 778899999952111 235799997643
No 172
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=20.90 E-value=48 Score=28.41 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=25.2
Q ss_pred CcccccccccccCCCeeEEeC-CCCccchhhHHHH
Q 020569 265 DAECCICLSAYDDGVELRELP-CGHHFHCACVDKW 298 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~W 298 (324)
+..|.+|-..|.--..-.--. |++.|+..|-...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 579999999997544333344 9999999997654
No 173
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=20.69 E-value=91 Score=19.75 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=19.3
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHh---hhhhhh
Q 020569 54 ERPNMPLRLWIVGYAIQCVLHMVC---VCVEYK 83 (324)
Q Consensus 54 E~p~~Pl~~WivgY~~~c~~~~~l---~~~~~~ 83 (324)
|.|..|=-.+|+++.++.++-+.+ +.|++.
T Consensus 2 ~Cp~~~n~~~Iv~gvi~~ivliGl~lLliwk~~ 34 (43)
T 2k9j_B 2 ESPKGPDILVVLLSVMGAILLIGLAALLIWKLL 34 (43)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEeehHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666667777888887665443 555543
No 174
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=20.41 E-value=76 Score=22.75 Aligned_cols=35 Identities=23% Similarity=0.495 Sum_probs=25.6
Q ss_pred CcccccccccccCCCeeEEeC-CCCccchhhHHHHH
Q 020569 265 DAECCICLSAYDDGVELRELP-CGHHFHCACVDKWL 299 (324)
Q Consensus 265 ~~~C~ICL~~y~~~~~lr~Lp-C~H~FH~~CId~WL 299 (324)
...|.+|-..|.--..-.--. |+++|..+|.....
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~ 54 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNEL 54 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEE
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHHhCCee
Confidence 357999999998554333344 99999999977543
Done!