BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020571
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 2 NLVENKLESLPASIGCLSSLEFLHLTRNNL-----SLPELPVLLSHIEARNCKQLQSLPE 56
NL++ LP IG LSSL+ L L+RNN S+ +L L S ++ ++C++L LPE
Sbjct: 844 NLIDG---GLPEEIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQS-LDLKDCQRLTQLPE 899
Query: 57 LPSCPEELDTSILESLS-KHFRPTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVV 115
LP EL +L H+ T +KL + +KL+ + N+ + + + +
Sbjct: 900 LPPELNELHVDCHMALKFIHYLVTKRKKL------HRVKLDDAHNDTMYNLFAYTMFQNI 953
Query: 116 ALLRQ---FQQKIQHKVYI------EIPDWFSYQSSGSSIAIQLPPHC-CNKNFIGFALC 165
+ +R + V+ +IP WF +Q SS+++ LP + F+GFA+C
Sbjct: 954 SSMRHDISASDSLSLTVFTGQPYPEKIPSWFHHQGWDSSVSVNLPENWYIPDKFLGFAVC 1013
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 49/184 (26%)
Query: 3 LVENK-LESLPASIGCLSSLEFLHLTR--NNLSLPELPVLLSHIEARNCKQLQSLPELPS 59
L ENK LE++P + L L+ + ++ N +SLP+LP +S + A NC+ LQ
Sbjct: 772 LRENKELETIPRYLKYLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQ------- 824
Query: 60 CPEELDTSILESLSKHFRPTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLR 119
L HFR K + F NCLKL + +Q++I HR V
Sbjct: 825 -----------ILHGHFR----NKSIHLNFINCLKLGQR-------AQEKI-HRSVY--- 858
Query: 120 QFQQKIQHKVYI-------EIPDWFSYQSSGSSIAIQLPPHCCNKNFIGFALCVVIQLEE 172
I YI +P +FSY+S+GSSI I +K F F +C+V+ +
Sbjct: 859 -----IHQSSYIADVLPGEHVPAYFSYRSTGSSIMIHSNKVDLSK-FNRFKVCLVLGAGK 912
Query: 173 GFDA 176
F+
Sbjct: 913 RFEG 916
>sp|P0DA75|DPO3A_STRPQ DNA polymerase III subunit alpha OS=Streptococcus pyogenes serotype
M3 (strain SSI-1) GN=dnaE PE=3 SV=1
Length = 1036
Score = 40.4 bits (93), Expect = 0.016, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQELTEAGLKEKGLWKEPYQSRLLHELV 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|P0DA74|DPO3A_STRP3 DNA polymerase III subunit alpha OS=Streptococcus pyogenes serotype
M3 (strain ATCC BAA-595 / MGAS315) GN=dnaE PE=3 SV=1
Length = 1036
Score = 40.4 bits (93), Expect = 0.016, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQELTEAGLKEKGLWKEPYQSRLLHELV 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|Q5XBV1|DPO3A_STRP6 DNA polymerase III subunit alpha OS=Streptococcus pyogenes serotype
M6 (strain ATCC BAA-946 / MGAS10394) GN=dnaE PE=3 SV=1
Length = 1036
Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQELTEAGLKEKGLWKEPYQSRLLHELI 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|Q8P0S5|DPO3A_STRP8 DNA polymerase III subunit alpha OS=Streptococcus pyogenes serotype
M18 (strain MGAS8232) GN=dnaE PE=3 SV=1
Length = 1036
Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELV 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|P0C0F2|DPO3A_STRPY DNA polymerase III subunit alpha OS=Streptococcus pyogenes GN=dnaE
PE=3 SV=1
Length = 1034
Score = 40.0 bits (92), Expect = 0.025, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELADCQQLTAFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELV 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|P0C0F3|DPO3A_STRP1 DNA polymerase III subunit alpha OS=Streptococcus pyogenes serotype
M1 GN=dnaE PE=3 SV=1
Length = 1036
Score = 40.0 bits (92), Expect = 0.026, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 18 LSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEELDTSILESLSKHFR 77
+ +L LH R+NLSL E PV+ S E +C+QL + + CP+ L LE L
Sbjct: 166 METLHMLHAIRDNLSLAETPVVESDQELADCQQLTAFYQ-THCPQALQN--LEDLVSGI- 221
Query: 78 PTASRKLTYFMFTNCLKLNKSGNNILADSQQRIQHRVVALLRQ-------FQQKIQHKVY 130
Y+ F LKL + ++Q +Q A L++ +Q ++ H++
Sbjct: 222 --------YYDFDTNLKLPHFNRD--KSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELV 271
Query: 131 I 131
I
Sbjct: 272 I 272
>sp|Q83RJ4|IPA3_SHIFL E3 ubiquitin-protein ligase ipaH3 OS=Shigella flexneri GN=ipaH3
PE=1 SV=1
Length = 571
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 5 ENKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVLLSHIEARNCKQLQSLPELPSCPEE 63
+N+L +LP +SL+ L + N L+ LPELP LL +I A N QL LPELP+ E
Sbjct: 109 DNRLSTLPE---LPASLKHLDVDNNQLTMLPELPALLEYINADN-NQLTMLPELPTSLEV 164
Query: 64 L 64
L
Sbjct: 165 L 165
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 21 LEFLHLTRNNLS-LPELPVLLSHIEARNCKQLQSLPELPSCPEELD--TSILESL 72
LE+++ N L+ LPELP L + RN QL LPELP E LD T++LESL
Sbjct: 142 LEYINADNNQLTMLPELPTSLEVLSVRN-NQLTFLPELPESLEALDVSTNLLESL 195
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 24 LHLTRNNL-SLPELPVLLSHIEARNC-KQLQSLPELPSCPEELD 65
L +T+N L SLPELP L +++A C +L +LPELP+ + LD
Sbjct: 85 LEITQNALISLPELPASLEYLDA--CDNRLSTLPELPASLKHLD 126
>sp|Q9D9Q0|LRC69_MOUSE Leucine-rich repeat-containing protein 69 OS=Mus musculus GN=Lrrc69
PE=2 SV=1
Length = 347
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVLLSHIEA--RNCKQLQSLPE 56
+NL +N+L SLP IG L SL +L L RNNL+ +P+ L H+ N Q+ +PE
Sbjct: 112 LNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNQIVYIPE 170
>sp|Q9HB75|PIDD_HUMAN p53-induced protein with a death domain OS=Homo sapiens GN=PIDD
PE=1 SV=2
Length = 910
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 12/71 (16%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLS-----LPELPVLLSHIEARNCKQLQSLP 55
+NL N+L+SLPAS+ L SL L L N L+ L LP LL+ ++ R+ QL+ LP
Sbjct: 222 LNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLP-LLTRLDLRD-NQLRDLP 279
Query: 56 ELPSCPEELDT 66
PE LD
Sbjct: 280 -----PELLDA 285
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSL--PELPVLLSHIEAR-NCKQLQSLP 55
+ + N+L++LP ++G LS+L+ L L++N L PE+ L S +E +LQSLP
Sbjct: 176 LTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGLGSLLELNLASNRLQSLP 233
>sp|B5DX45|SUR8_DROPS Leucine-rich repeat protein soc-2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=Sur-8 PE=3 SV=1
Length = 629
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LPA IGCL +L L L N+L SLPE +NCKQL+ L
Sbjct: 178 LYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPE--------SLQNCKQLKVL 222
>sp|Q5ZLN0|LRC40_CHICK Leucine-rich repeat-containing protein 40 OS=Gallus gallus
GN=LRRC40 PE=2 SV=1
Length = 603
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCK--QLQSLPEL 57
+NL N+L+ LPA I + SL L T+N L S+P ++ +E + +L+SLPEL
Sbjct: 202 LNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLPEL 261
Query: 58 PSC 60
PSC
Sbjct: 262 PSC 264
>sp|A6QLV3|SHOC2_BOVIN Leucine-rich repeat protein SHOC-2 OS=Bos taurus GN=SHOC2 PE=2 SV=1
Length = 582
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NKL+SLPA +GCL +L L L+ N SL LP L +++ L+ L E+PS
Sbjct: 130 LYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLKKLRMLDLRHNKLREIPSV 187
Query: 61 PEELDT 66
LD+
Sbjct: 188 VYRLDS 193
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPE--LP 58
++L ENKLESLP I L L+ L LT N L+ LP + H+ N L L E L
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHLT--NLTHL-GLGENLLT 507
Query: 59 SCPEELDTSILESLSKHF 76
PEE+ T LE+L + +
Sbjct: 508 HLPEEIGT--LENLEELY 523
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIE---ARNCKQLQSLPE 56
+NL +KLE LP+SIG L L +L L+ NN SLPE L +++ NC L LP+
Sbjct: 532 LNLSYSKLEQLPSSIGDLLHLRYLDLSCNNFRSLPERLCKLQNLQTLDVHNCYSLNCLPK 591
Query: 57 LPS 59
S
Sbjct: 592 QTS 594
>sp|Q5RAV5|SHOC2_PONAB Leucine-rich repeat protein SHOC-2 OS=Pongo abelii GN=SHOC2 PE=2
SV=2
Length = 582
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NKL+SLPA +GCL +L L L+ N SL LP L +++ L+ L E+PS
Sbjct: 130 LYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLKKLRMLDLRHNKLREIPSV 187
Query: 61 PEELDT 66
LD+
Sbjct: 188 VYRLDS 193
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPE--LP 58
++L ENKLESLP I L L+ L LT N L+ LP + H+ N L L E L
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHLT--NLTHL-GLGENLLT 507
Query: 59 SCPEELDTSILESLSKHF 76
PEE+ T LE+L + +
Sbjct: 508 HLPEEIGT--LENLEELY 523
>sp|Q9UQ13|SHOC2_HUMAN Leucine-rich repeat protein SHOC-2 OS=Homo sapiens GN=SHOC2 PE=1
SV=2
Length = 582
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NKL+SLPA +GCL +L L L+ N SL LP L +++ L+ L E+PS
Sbjct: 130 LYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLKKLRMLDLRHNKLREIPSV 187
Query: 61 PEELDT 66
LD+
Sbjct: 188 VYRLDS 193
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPE--LP 58
++L ENKLESLP I L L+ L LT N L+ LP + H+ N L L E L
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHLT--NLTHL-GLGENLLT 507
Query: 59 SCPEELDTSILESLSKHF 76
PEE+ T LE+L + +
Sbjct: 508 HLPEEIGT--LENLEELY 523
>sp|Q6AYI5|SHOC2_RAT Leucine-rich repeat protein SHOC-2 OS=Rattus norvegicus GN=Shoc2
PE=2 SV=1
Length = 582
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NKL+SLPA +GCL +L L L+ N SL LP L +++ L+ L E+PS
Sbjct: 130 LYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLKKLRMLDLRHNKLREIPSV 187
Query: 61 PEELDT 66
LD+
Sbjct: 188 VYRLDS 193
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPE--LP 58
++L ENKLESLP I L L+ L LT N L+ LP + H+ N L L E L
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHLT--NLTHL-GLGENLLT 507
Query: 59 SCPEELDTSILESLSKHF 76
PEE+ T LE+L + +
Sbjct: 508 HLPEEIGT--LENLEELY 523
>sp|O88520|SHOC2_MOUSE Leucine-rich repeat protein SHOC-2 OS=Mus musculus GN=Shoc2 PE=2
SV=2
Length = 582
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NKL+SLPA +GCL +L L L+ N SL LP L +++ L+ L E+PS
Sbjct: 130 LYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLKKLRMLDLRHNKLREIPSV 187
Query: 61 PEELDT 66
LD+
Sbjct: 188 VYRLDS 193
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHI 43
++L ENKLESLP I L L+ L LT N LS LP + H+
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLS--TLPRGIGHL 493
>sp|B0W6M9|SUR8_CULQU Leucine-rich repeat protein soc-2 homolog OS=Culex quinquefasciatus
GN=Sur-8 PE=3 SV=1
Length = 628
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQ--SLPELPSC 60
L NK+ SLP IGCLS+L+ L L N SL LP L +++A L+ L E+P
Sbjct: 177 LYGNKISSLPVEIGCLSNLKTLALNEN--SLTSLPDSLQNLKALKVLDLRHNKLSEIPDV 234
Query: 61 PEELDT 66
+L T
Sbjct: 235 IYKLHT 240
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIE-----ARNCKQLQSLP 55
++L EN+LESLP+ IG L L+ L L N +L LP + H+ + LQ LP
Sbjct: 500 LDLEENRLESLPSEIGLLHDLQKLILQSN--ALQSLPRTIGHLTNLTYLSVGENNLQYLP 557
Query: 56 ELPSCPEELDT 66
E E L++
Sbjct: 558 EEIGTLENLES 568
>sp|Q15404|RSU1_HUMAN Ras suppressor protein 1 OS=Homo sapiens GN=RSU1 PE=1 SV=3
Length = 277
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELP 37
+NL N+L +LP G L +LE L LT NNLS LP
Sbjct: 91 LNLGMNRLNTLPRGFGSLPALEVLDLTYNNLSENSLP 127
>sp|Q9CRC8|LRC40_MOUSE Leucine-rich repeat-containing protein 40 OS=Mus musculus GN=Lrrc40
PE=2 SV=2
Length = 602
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 10/50 (20%)
Query: 6 NKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVLLSHIEARNCKQLQSL 54
N LE++P +G + SLE L+L RN L LPE P +C+QL+ L
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPEFP---------SCRQLKEL 270
>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2
Length = 1109
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 1 MNLVENKLES-LPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQL 51
+ L +N+LE +P +G LS L++LHL NNLS E+P+ + I++ QL
Sbjct: 337 LQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLS-GEVPLSIWKIQSLQSLQL 387
>sp|P34716|RECA_ACIFA Protein RecA OS=Acidiphilium facilis GN=recA PE=3 SV=1
Length = 354
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 228 GLPDPDVGHHTTVSFQFSLYYPYLASPRLHKLKCCGVCPAVLNPSKTKPTTLTLKFSASS 287
G+ DPDV ++ +L L PR G + P + TTLTLK AS+
Sbjct: 34 GINDPDVKSTGSLGLDGALGQGGL--PR-------GRVVEIYGPESSGKTTLTLKAIASA 84
Query: 288 EAQCSERARTSK--SLDRSDEEEVELSPKRICRYQPDT 323
+A+ + A T +LD ++ ++ KR+ QPDT
Sbjct: 85 QAEGATPAFTDAEHALDPGFASKLGVNVKRLLISQPDT 122
>sp|Q5M8G4|LRC40_XENTR Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis
GN=lrrc40 PE=2 SV=1
Length = 605
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 6 NKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVL--LSHIEARNCKQLQSL-PE 56
N LE++PAS+ + SLE L+L +N L+ LPELP L L + N Q+Q+L PE
Sbjct: 230 NLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGN-NQIQTLGPE 283
>sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like domain-containing protein At2g30105
OS=Arabidopsis thaliana GN=At2g30105 PE=1 SV=1
Length = 374
Score = 34.7 bits (78), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIE--ARNCKQLQSLPE- 56
+++ N L LP+++G L+SL L +T N L SLP LL+ +E N ++ SLPE
Sbjct: 207 LSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLPNELGLLTQLEILKANNNRITSLPES 266
Query: 57 LPSCP----EELDTSILESLSKHFRP-----------TASRKLTYFMFTNCLKLNKSG 99
+ +C +L +I+ L + F T + L +F CL+L+ G
Sbjct: 267 IGNCSFLMEVDLSANIISELPETFTKLRNLKTLELNNTGLKTLPSALFKMCLQLSTLG 324
>sp|Q6GPJ5|LRC40_XENLA Leucine-rich repeat-containing protein 40 OS=Xenopus laevis
GN=lrrc40 PE=2 SV=1
Length = 605
Score = 34.7 bits (78), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 6 NKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVL--LSHIEARNCKQLQSL 54
N LE++PAS+ + SLE L+L +N L+ LPELP L L + N Q+Q+L
Sbjct: 230 NLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGN-NQIQTL 280
>sp|Q5E9C0|RSU1_BOVIN Ras suppressor protein 1 OS=Bos taurus GN=RSU1 PE=2 SV=1
Length = 277
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELP 37
+NL N+L +LP G L +LE L LT NNL+ LP
Sbjct: 91 LNLGMNRLNTLPRGFGSLPALEVLDLTYNNLNENSLP 127
>sp|Q9CQ07|LRC18_MOUSE Leucine-rich repeat-containing protein 18 OS=Mus musculus GN=Lrrc18
PE=2 SV=1
Length = 262
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSC 60
++L N ++ LP SIG ++SL FL+++ N L+ LPV L+ ++ L L L S
Sbjct: 78 LDLHSNYIDKLPESIGQMTSLLFLNVSNNRLTTNGLPVELNQLKNIRTVNL-GLNHLDSV 136
Query: 61 PEEL 64
P L
Sbjct: 137 PTTL 140
>sp|Q6UWE0|LRSM1_HUMAN E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens GN=LRSAM1 PE=1
SV=1
Length = 723
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHI 43
+N+ +NKL+ LP ++G L SL L+++ N + LP +L+H+
Sbjct: 132 LNVKDNKLKELPDTVGELRSLRTLNISGNEIQ--RLPQMLAHV 172
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSLPELPS 59
++L +N+L +LP +G L++L+ L++ RN L LP L+ ++ N K L ELP
Sbjct: 86 LDLHDNQLTALPDDLGQLTALQVLNVERNQLMQLPRSIGNLTQLQTLNVKD-NKLKELPD 144
Query: 60 CPEEL 64
EL
Sbjct: 145 TVGEL 149
>sp|Q66HD6|LRC18_RAT Leucine-rich repeat-containing protein 18 OS=Rattus norvegicus
GN=Lrrc18 PE=2 SV=1
Length = 256
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSC 60
++L N ++ LP SIG ++SL FL+++ N L+ LPV L+ ++ L L L S
Sbjct: 78 LDLHSNYIDKLPESIGQMTSLLFLNVSNNRLTTNGLPVELNQLKNIRTVNL-GLNHLDSV 136
Query: 61 PEEL 64
P L
Sbjct: 137 PTTL 140
>sp|Q8VEG6|CNO6L_MOUSE CCR4-NOT transcription complex subunit 6-like OS=Mus musculus
GN=Cnot6l PE=1 SV=2
Length = 555
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSC 60
++L NKL SLPA +G + SL L L N L + LP L + QLQ+L L
Sbjct: 84 LDLSSNKLRSLPAELGNMVSLRELLLNDNYLRV--LPYELGRL-----FQLQTL-GLTGN 135
Query: 61 PEELDTSILESLSKHFRPTASRKLTYFMFTN 91
P D +S + P +RKL FM N
Sbjct: 136 PLSQDI-----MSLYQDPDGTRKLLNFMLDN 161
>sp|Q08817|SOG2_YEAST Leucine-rich repeat-containing protein SOG2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SOG2 PE=1
SV=1
Length = 791
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLP----E 56
++L +N L SLPAS LS L++L L NN E+P +L+ C QL+ L E
Sbjct: 71 LSLRKNHLTSLPASFKRLSRLQYLDLHNNNFK--EIPYILTQ-----CPQLEILDLSSNE 123
Query: 57 LPSCPEELDT 66
+ + P+E+ +
Sbjct: 124 IEALPDEISS 133
>sp|Q5F4C4|SHOC2_CHICK Leucine-rich repeat protein SHOC-2 OS=Gallus gallus GN=SHOC2 PE=2
SV=1
Length = 529
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPE 35
L NKL+SLPA +GCL +L L L+ N+L SLP+
Sbjct: 130 LYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPD 163
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHI 43
++L ENKLESLP I L L+ L LT N L+ LP + H+
Sbjct: 453 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHL 493
>sp|B4IBI9|SUR8_DROSE Leucine-rich repeat protein soc-2 homolog OS=Drosophila sechellia
GN=Sur-8 PE=3 SV=1
Length = 683
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 16/66 (24%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQ-------SL 54
L NK+ LP IGCL SL L L N+L SLPE +NC QL+ L
Sbjct: 193 LYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE--------SLQNCSQLKVLDLRHNKL 244
Query: 55 PELPSC 60
E+PS
Sbjct: 245 AEIPSV 250
>sp|B4QVR7|SUR8_DROSI Leucine-rich repeat protein soc-2 homolog OS=Drosophila simulans
GN=Sur-8 PE=3 SV=2
Length = 680
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LP IGCL SL L L N+L SLPE +NC QL+ L
Sbjct: 190 LYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE--------SLQNCSQLKVL 234
>sp|B3P3E8|SUR8_DROER Leucine-rich repeat protein soc-2 homolog OS=Drosophila erecta
GN=Sur-8 PE=3 SV=1
Length = 644
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LP IGCL SL L L N+L SLPE +NC QL+ L
Sbjct: 193 LYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE--------SLQNCSQLKVL 237
>sp|B4PU77|SUR8_DROYA Leucine-rich repeat protein soc-2 homolog OS=Drosophila yakuba
GN=Sur-8 PE=3 SV=1
Length = 645
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LP IGCL SL L L N+L SLPE +NC QL+ L
Sbjct: 194 LYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE--------SLQNCSQLKVL 238
>sp|Q1L8Y7|SHOC2_DANRE Leucine-rich repeat protein SHOC-2 OS=Danio rerio GN=shoc2 PE=2
SV=1
Length = 561
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPE 35
L NKL+SLP +GCLS L L L+ N+L SLP+
Sbjct: 109 LYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPD 142
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHI 43
++L ENKLESLP I L L+ L LT N L+ LP + H+
Sbjct: 432 LDLEENKLESLPNEIAYLKDLQKLVLTNNQLT--TLPRGIGHL 472
>sp|Q55E58|PATS1_DICDI Probable serine/threonine-protein kinase pats1 OS=Dictyostelium
discoideum GN=pats1 PE=3 SV=1
Length = 3184
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRN 29
+N+ +NKL+SLPASIG LS L L+L N
Sbjct: 1637 LNVCKNKLDSLPASIGQLSQLVSLNLNNN 1665
>sp|Q9VEK6|SUR8_DROME Leucine-rich repeat protein soc-2 homolog OS=Drosophila
melanogaster GN=Sur-8 PE=2 SV=3
Length = 641
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LP IGCL SL L L N+L SLPE +NC QL+ L
Sbjct: 190 LYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE--------SLQNCSQLKVL 234
>sp|Q9V780|LAP1_DROME Protein lap1 OS=Drosophila melanogaster GN=Lap1 PE=2 SV=1
Length = 849
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 6 NKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVL---LSHIEARNCKQLQSLPE----L 57
N LES+P +IG L L+ L L RN + ++PE L+H++ +C LQ LP+ L
Sbjct: 73 NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDL-SCNSLQRLPDAITSL 131
Query: 58 PSCPE-ELDTSILESLSKHFRPTASRKLTYFMFTNCLKLNKS 98
S E L+ + LE L +F + ++ N + L KS
Sbjct: 132 ISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKS 173
>sp|Q9ULM6|CNOT6_HUMAN CCR4-NOT transcription complex subunit 6 OS=Homo sapiens GN=CNOT6
PE=1 SV=2
Length = 557
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSC 60
++L NK+ SLPA +G + SL LHL N L + LP E QLQ+L L
Sbjct: 79 LDLSSNKIRSLPAELGNMVSLRELHLNNNLLRV--LP-----FELGKLFQLQTLG-LKGN 130
Query: 61 PEELDTSILESLSKHFRPTASRKLTYFMFTN 91
P D L+ + P +R+L ++ N
Sbjct: 131 PLTQDI-----LNLYQEPDGTRRLLNYLLDN 156
>sp|Q6YRJ6|SYV_ONYPE Valine--tRNA ligase OS=Onion yellows phytoplasma (strain OY-M)
GN=valS PE=3 SV=2
Length = 882
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 185 CNYNFEIKT--PSETKHADD-YCFLFADEFIESDHVLLGFSPCWNVGLPDPDVGHHTTVS 241
+YNFE T P ++ + + LF + I D+ ++ + P L + +V +H T
Sbjct: 135 LDYNFEKFTLDPDLSQQVQEVFGKLFQKKLIYRDYKIINWDPETKTALSNVEVNYHETEG 194
Query: 242 FQFSLYYPYLASPRLHKLKCCGVCPAVLNPSKTKPTTL 279
+ + Y + P L + P+ L + T+P T+
Sbjct: 195 KLYYIKYFLVDFPTNSNLSDASLVPSFLEIATTRPETM 232
>sp|A2BHJ4|CNO6L_DANRE CCR4-NOT transcription complex subunit 6-like OS=Danio rerio
GN=cnot6l PE=2 SV=1
Length = 559
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSC 60
+NL NKL SLPA +G + +L L L N L + LP L + QLQ+L L
Sbjct: 79 LNLSSNKLRSLPAELGNMVTLRELLLNNNCLRV--LPYELGRL-----FQLQTL-GLKGN 130
Query: 61 PEELDTSILESLSKHFRPTASRKLTYFMFTN 91
P D L+ + P +RKL +M N
Sbjct: 131 PLSQDI-----LNLYQEPDGTRKLLNYMLDN 156
>sp|Q1EA11|CCR4_COCIM Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Coccidioides immitis (strain RS) GN=CCR4 PE=3 SV=2
Length = 758
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNLS-LPELPVLLSHIEARNC--KQLQSLPELPS 59
L NKL+SLP+SIG L +L L ++ N L+ +PE +L++++ LQ+LP
Sbjct: 255 LNHNKLKSLPSSIGELKNLTHLDISSNELTEIPEEIGMLTNLKKLLLFDNSLQTLPFELG 314
Query: 60 CPEELDTSILES 71
+LDT +E
Sbjct: 315 YLYQLDTLGIEG 326
>sp|Q9ERV7|PIDD_MOUSE p53-induced protein with a death domain OS=Mus musculus GN=Pidd
PE=1 SV=1
Length = 915
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 1 MNLVENKLESLPASIGCLSSLEFLHLTRNNLS-----LPELPVLLSHIEARNCKQLQSLP 55
+NL N+L+SLPAS+ L SL L L N L+ L LP L++ ++ R+ +L+ LP
Sbjct: 227 LNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLP-LITRLDLRD-NRLRDLP 284
>sp|B3LWU3|SUR8_DROAN Leucine-rich repeat protein soc-2 homolog OS=Drosophila ananassae
GN=Sur-8 PE=3 SV=1
Length = 641
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 3 LVENKLESLPASIGCLSSLEFLHLTRNNL-SLPELPVLLSHIEARNCKQLQSL 54
L NK+ LP IGCL +L L L N+L SLPE +NC QL+ L
Sbjct: 190 LYSNKIGQLPPEIGCLVNLRNLALNENSLTSLPE--------SLQNCNQLKVL 234
>sp|Q31F87|MUTS_THICR DNA mismatch repair protein MutS OS=Thiomicrospira crunogena
(strain XCL-2) GN=mutS PE=3 SV=1
Length = 871
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 22 EFLHLTRNNLSLPELPVLLSHIEARNCKQL-QSLPELPSCPEELDTSILESLSKHFRPTA 80
+ LHL R+ LPEL LL A +QL + L P +L+T+++ES R
Sbjct: 367 DILHLGRSLNQLPELQALLKQQTANKWQQLSKQLGLYPELASQLETALVESPPMLMRDGG 426
Query: 81 SRKLTYFMFTNCLK--LNKSGNNILADSQQRIQHRVVALLRQFQQKIQHKVYIEI 133
Y + L+ N++G+ +LA + + + L+ ++ H YIE+
Sbjct: 427 VFAEGYDSELDELRNLKNQAGDYLLALEAREKERTGITTLKVGYNRV-HGYYIEV 480
>sp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g33300 OS=Arabidopsis
thaliana GN=At4g33300 PE=2 SV=3
Length = 816
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6 NKLESLPASIGCLSSLEFLHLTRNNLSLPELPVLLSHIEARNCKQLQSLPELPSCPEEL 64
+ L +LP+SI L+SL L +T N L ELP LS ++A +L + PEL + P E+
Sbjct: 667 DDLVALPSSICGLTSLSCLSIT-NCPRLGELPKNLSKLQALEILRLYACPELKTLPGEI 724
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,945,814
Number of Sequences: 539616
Number of extensions: 5019840
Number of successful extensions: 11549
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 11132
Number of HSP's gapped (non-prelim): 478
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)