BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020581
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2
Length = 1980
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 143/277 (51%), Gaps = 18/277 (6%)
Query: 53 DVRDR-----RRETQEEKQEEAIVGTCPFMCPEAERLQRQRLRDLAVFERLHGDPRNSSP 107
D RDR R + + + VGTC MCPE ER R+ L+VFE + G +
Sbjct: 611 DQRDRIMRQARVKRTDLDKARTFVGTCLDMCPEKERYMRETRSQLSVFEVVPGTDQVDH- 669
Query: 108 ALAVKKFCRTMSAK-EVRASDVRPLPVLEETLNYLLS-LLDSTEHPFEVIHDFVFDRTRS 165
A AVK++ R+ + + E ++RPLPVL T++YL++ ++D E +DFV++RTR
Sbjct: 670 AAAVKEYSRSSADQEEPLPHELRPLPVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRG 729
Query: 166 VRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSL 225
+R+D+ Q++ + +++ EK +FH+ H + C S +N E +TK L SL
Sbjct: 730 IRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFM---CEEPMSSFDAKINNENMTKCLQSL 786
Query: 226 YNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFA 285
+Y+ R+ EAEF+ + VLL L+ G+ L + P+ + S E+ FA
Sbjct: 787 KEMYQDLRNKGVFCASEAEFQGYNVLLSLNK-----GDILREVQQFHPA-VRNSSEVKFA 840
Query: 286 RQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDE 322
QA N+ RF V + ASYL C++ Y +
Sbjct: 841 VQAFAALNSNNFVRFFKLVQS-ASYLNACLLHCYFSQ 876
>sp|Q9WUU9|MCM3A_MOUSE 80 kDa MCM3-associated protein OS=Mus musculus GN=Mcm3ap PE=2 SV=2
Length = 1971
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 144/277 (51%), Gaps = 18/277 (6%)
Query: 53 DVRDR-----RRETQEEKQEEAIVGTCPFMCPEAERLQRQRLRDLAVFERLHGDPRNSSP 107
D RDR R + + + A VGTCP MCPE ER R+ L+VFE + G +
Sbjct: 604 DQRDRIMRQARVKRTDLDKARAFVGTCPDMCPEKERYLRETRSQLSVFEVVPGTDQVDH- 662
Query: 108 ALAVKKFCRTMS-AKEVRASDVRPLPVLEETLNYLLS-LLDSTEHPFEVIHDFVFDRTRS 165
A AVK++ R+ + +E ++RP VL T++YL++ ++D E +DFV++RTR
Sbjct: 663 AAAVKEYSRSSADQEEPLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRG 722
Query: 166 VRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSL 225
+R+D+ Q++ + +++ EK +FH+ H + C S +N E +TK L SL
Sbjct: 723 IRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFM---CEEPMSSFDAKINNENMTKCLQSL 779
Query: 226 YNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFA 285
+Y+ R+ EAEF+ + VLL+L+ G+ L + P + S E+ FA
Sbjct: 780 KEMYQDLRNKGVFCASEAEFQGYNVLLNLNK-----GDILREVQQFHPD-VRNSPEVNFA 833
Query: 286 RQALRYFQMGNYRRFLSTVAAEASYLQYCIIEPYIDE 322
QA N+ RF V + ASYL C++ Y ++
Sbjct: 834 VQAFAALNSNNFVRFFKLVQS-ASYLNACLLHCYFNQ 869
>sp|O74889|SAC31_SCHPO SAC3 family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC576.05 PE=1 SV=1
Length = 1024
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 61 TQEEKQEEAI--VGTCPFMCPEAERLQRQRLRDLAVFERLHGDPRNS--SPALAVKKFCR 116
T+ + +EA+ VGTCP MCPE ER QR+ +L ER +P LAVK F R
Sbjct: 93 TKPRQLDEAVTFVGTCPDMCPEYEREQREYQNNL---ERWEINPETGRVDKNLAVKAFHR 149
Query: 117 TMSAKE-VRASDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNI 175
+ E SDVRP PVL+++L+YL+ + P E H FV DRTRS+RQD +QN
Sbjct: 150 PAAGNEQALPSDVRPPPVLKKSLDYLVDKIVCGPDPLENTHFFVRDRTRSIRQDFTLQNC 209
Query: 176 VNDKAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKA-LTSLYNLYEANRS 234
+ A+ E+I ++H++ H+L C S +EQL K L SL Y+ R
Sbjct: 210 RDLDAVACHERIARYHILCIHQL---CEKKQFSAQQ--EVEQLRKGILQSLCEFYDDLRK 264
Query: 235 SKPIHEKEAEFRSFYVLLHL 254
K E EFRS+ ++ HL
Sbjct: 265 VKIRCPNEPEFRSYAIITHL 284
>sp|Q9USI4|SAC32_SCHPO SAC3 family protein 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC70.06 PE=3 SV=1
Length = 458
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 138/271 (50%), Gaps = 31/271 (11%)
Query: 27 SSNQSRSNNRFSFPKSSSSSSSSSANDVRDRRRETQEEKQEE---------AIVGTCPFM 77
S ++S S R + S++ ++ ++ +R++ QE Q + +VGTC M
Sbjct: 18 SLDRSDSTKRAARAARFSTTLDANFQALKKKRKDEQESFQAKQSTNWEKSSVLVGTCRQM 77
Query: 78 CPEAERLQRQRLRDLAVFERLHGDP--RNSSPALAVKKFCRTMSAKE-VRASDVRPLPVL 134
CPE E +R+ + +E DP + + P+LAVK + R + K + SDVRP +L
Sbjct: 78 CPEFELEERKLQHAIHPYEL---DPVSKQAHPSLAVKAYHRPAAGKGPILPSDVRPPSIL 134
Query: 135 EETLNYLLS-LLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVI 193
+ T++YL +LD + H FV DRTR+VRQD +Q+ + ++ E I +FH+I
Sbjct: 135 KNTIDYLFKVILD--RYSLREAHAFVRDRTRAVRQDFSVQSSFSQDSVYCHELIARFHII 192
Query: 194 SHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYN---LYEANRSSKPIHEKEAEFRSFYV 250
S H+L + + S +EQL+K++ LY LY+ K EAEFR++ V
Sbjct: 193 SLHELAHTPNFS-----RQQEIEQLSKSMEILYTLGQLYDYMHLRKEHCTHEAEFRAYMV 247
Query: 251 LLHLDSNGQP-VGESLSLWFRHV-PSPIIKS 279
LL L G P VG W V PI+K+
Sbjct: 248 LLSL---GDPSVGLDTLSWPDFVFKKPIVKT 275
>sp|Q9U3V9|XMAS2_DROME Protein xmas-2 OS=Drosophila melanogaster GN=xmas-2 PE=1 SV=3
Length = 1370
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 43/298 (14%)
Query: 44 SSSSSSSANDVRDR--RRETQEEKQEEAIVGTCPFMCPEAERLQRQRLRDLAVFERLHGD 101
+S S D RD+ R + K A G C MCPE ER+ R+ R +A +E G
Sbjct: 170 TSEEKFSVLDARDKLLRLNRTQHKLSGATQGHCADMCPEKERVLREFQRQVAYYELQPGS 229
Query: 102 PRNSSPALAVKKFCRTMSAKEVRASDVRPLP-------VLEETLNYLL-SLLDSTE---- 149
A+K++ R+ + +E PLP L T++YL+ ++D +E
Sbjct: 230 DELICHERALKQYSRSSADQET------PLPHELRNETALHMTMSYLMHEIMDISERQDP 283
Query: 150 --HPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRSSCSSSSI 207
H + H FV+DRTRS+R+++ Q + + A+ + E+ +FH+ +L + S
Sbjct: 284 QSHMGDWFH-FVWDRTRSIRKEITQQELCSLGAVKLVEQCARFHIHCAARLVDADPSVFD 342
Query: 208 SPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHL-DSNGQPVGESLS 266
S +N E LTK L +L +Y R KEAEFR + VLL+L D+N
Sbjct: 343 SK---INAENLTKCLQTLKYMYHDLRIKGVPCPKEAEFRGYIVLLNLADAN--------F 391
Query: 267 LW-FRHVPSPIIKSKEMWFARQALRYF---QMGNYRRFLSTVA-AEASYLQYCIIEPY 319
LW +P+ + E+ RQA++++ Q N+ RF +A + SYL CI+ Y
Sbjct: 392 LWDIGQLPAELQSCPEV---RQAIQFYLALQDTNFVRFFQLLADKDTSYLSACILVNY 446
>sp|P46674|SAC3_YEAST Nuclear mRNA export protein SAC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAC3 PE=1 SV=2
Length = 1301
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 68 EAIV--GTCPFMCPEAERLQRQRLRDLAVFERLHGDPRNSSPALAVKKFCRTMSAKEVRA 125
+AIV GTC MCP ER +R + +E+ + + +S A+K F R +A
Sbjct: 192 DAIVFQGTCLDMCPTFERSRRNVEYTVYSYEKNQPNDKKASRTKALKVFARPAAAAAPPL 251
Query: 126 -SDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMF 184
SDVRP +L +TL+Y++ L +T E F++DR RS+RQD QN +A++
Sbjct: 252 PSDVRPPHILVKTLDYIVDNLLTTLPESE---GFLWDRMRSIRQDFTYQNYSGPEAVDCN 308
Query: 185 EKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAE 244
E+IV+ H++ H + S S+ LEQL K+L +L +Y+ RSS EAE
Sbjct: 309 ERIVRIHLLILHIMVKSNVEFSLQQ----ELEQLHKSLITLSEIYDDVRSSGGTCPNEAE 364
Query: 245 FRSFYVL 251
FR++ +L
Sbjct: 365 FRAYALL 371
>sp|A6NKF1|SAC31_HUMAN SAC3 domain-containing protein 1 OS=Homo sapiens GN=SAC3D1 PE=1
SV=2
Length = 404
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 68 EAIVGTCPFMCPEAERLQRQ---RLRDLAVFERLHGDPRNSSPALAVKKFCRTMSAKE-V 123
E VGTCP MCP AER QR+ RL L V DP + P AVK++ R + K
Sbjct: 51 ELPVGTCPDMCPAAERAQREREHRLHRLEVVPGCRQDPPRADPQRAVKEYSRPAAGKPRP 110
Query: 124 RASDVRPLPVLEETLNYLLS-LLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAIN 182
S +RP VL T+ YL + +S + + FV DR R+V DL +Q + +A
Sbjct: 111 PPSQLRPPSVLLATVRYLAGEVAESADIARAEVASFVADRLRAVLLDLALQGAGDAEAAV 170
Query: 183 MFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKE 242
+ E + + +L + P+ L Q+ + SL Y R + P H ++
Sbjct: 171 VLEAALATLLTVVARLGPDAARGPADPV--LLQAQVQEGFGSLRRCY--ARGAGP-HPRQ 225
Query: 243 AEFRSFYVLLHLDSNGQPVGESLSL--WFRHVPSPIIKSKEMWFARQALRYFQMGNYR-- 298
F+ ++L +L S + + E L L R P P+ K+ + A F+ GN
Sbjct: 226 PAFQGLFLLYNLGSV-EALHEVLQLPAALRACP-PLRKALAVDAA------FREGNAARL 277
Query: 299 -RFLSTVAAEASYLQYCIIEPYIDEA 323
R L T+ YL C ++ ++ A
Sbjct: 278 FRLLQTL----PYLPSCAVQCHVGHA 299
>sp|A6H687|SAC31_MOUSE SAC3 domain-containing protein 1 OS=Mus musculus GN=Sac3d1 PE=1
SV=1
Length = 427
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 27/325 (8%)
Query: 4 RHHSQSHSQRQQRRNHFSSSSSSSSNQSRSNNRFSFPKSSSSSSSSSANDVRDRRRETQE 63
R +S RQ + SS Q + RF +P + +SS+ T
Sbjct: 23 RGSGKSRKPRQAAFGQTGARVCPSSPQQDAVPRFRWPGDAECASST----------HTPT 72
Query: 64 EKQEEAIVGTCPFMCP---EAERLQRQRLRDLAVFERLHGDPRNSSPALAVKKFCRTMSA 120
+ +G CP MCP A R + +RL L V G+ + P VK++ R +
Sbjct: 73 MSGCKLPMGLCPDMCPAAERARRERERRLHRLEVEPGGRGNAPRADPKRTVKEYSRPAAG 132
Query: 121 K-EVRASDVRPLPVLEETLNYLLS-LLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVND 178
K S +RP PVL T+ YL + + + FV DR R+VR DL +Q + +
Sbjct: 133 KPRPPPSLLRPPPVLLATVRYLAGEVAGRGDVSCAEVASFVADRLRAVRLDLSLQGVDDA 192
Query: 179 KAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPI 238
A + E + + ++R + + P+ L Q+ + SL Y + P
Sbjct: 193 DAATVLEAALATLLAVVARVRPEETRGAADPV--LLQTQVQEGFGSLRRCYARGKGPYP- 249
Query: 239 HEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMGNYR 298
++A F+ ++L +L S + + E L L P+ + + A F+ N+
Sbjct: 250 --RQAAFQGLFLLYNLGSV-EALQEVLQL-----PAALRACPPLQAALAVDAAFREDNHA 301
Query: 299 RFLSTVAAEASYLQYCIIEPYIDEA 323
R + YLQ C ++ +I A
Sbjct: 302 RLFRLLRT-LPYLQSCAVQEHIGYA 325
>sp|Q1MTP1|THP3_SCHPO THP3 homolog C2A9.11c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC2A9.11c PE=3 SV=1
Length = 395
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 112 KKFCRTMSAKEVRASDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLI 171
K++ R SA + VRPLPVL++TL L ++ + ++ D+ +S+RQDL
Sbjct: 141 KRYLRLTSAPD--PDTVRPLPVLKQTLELLKKKWKEEKN-----YAYICDQFKSLRQDLT 193
Query: 172 MQNIVNDKAINMFE 185
+Q I N+ ++ ++E
Sbjct: 194 VQRIQNEFSVLVYE 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,904,632
Number of Sequences: 539616
Number of extensions: 4261659
Number of successful extensions: 45260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 34674
Number of HSP's gapped (non-prelim): 7053
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)