Query 020581
Match_columns 324
No_of_seqs 153 out of 463
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 05:09:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5v_A Nuclear mRNA export pro 100.0 1.4E-52 4.9E-57 401.7 18.1 189 122-323 2-206 (316)
2 4b0z_A RPN12, 26S proteasome r 99.7 3.9E-17 1.3E-21 149.5 14.0 155 138-323 11-176 (229)
3 4b4t_T 26S proteasome regulato 99.7 1.1E-16 3.9E-21 150.2 9.2 148 155-323 19-185 (274)
4 1rz4_A Eukaryotic translation 86.7 2.5 8.6E-05 37.9 8.6 101 177-305 22-122 (226)
5 3txn_A 26S proteasome regulato 30.5 74 0.0025 30.6 6.0 60 243-306 220-280 (394)
6 2dii_A TFIIH basal transcripti 18.8 2.1E+02 0.0072 20.4 5.0 36 213-250 14-52 (61)
7 1uap_A Procollagen C-proteinas 17.3 28 0.00095 29.5 0.0 14 68-81 12-25 (154)
8 2lqx_A Trypsin inhibitor BWI-2 19.9 33 0.0011 21.9 0.0 18 68-85 22-40 (41)
9 3r8n_O 30S ribosomal protein S 12.5 2.5E+02 0.0084 21.3 4.2 20 286-305 63-82 (88)
10 2hm3_A Nematocyst outer WALL a 11.9 71 0.0024 19.3 0.8 12 69-80 3-14 (31)
No 1
>3t5v_A Nuclear mRNA export protein SAC3; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-52 Score=401.71 Aligned_cols=189 Identities=29% Similarity=0.414 Sum_probs=167.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCchhhhHHhhhhhhhhhhhhhhhccCCchhHHHHHHHHHHHHHHhhhhhcc
Q 020581 122 EVRASDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKAINMFEKIVKFHVISHHKLRSS 201 (324)
Q Consensus 122 ~~~P~~vRP~~vL~kT~~yLl~~l~~~~~~~~~~y~Fl~DRlRAIRQDltvQ~~~~~~~i~vlE~~~RF~I~s~~~L~~~ 201 (324)
+|+|++||||+||++||+||++.+... +..+|+||||||||||||||+|++.++++|.|||+||||||+|.|.||+.
T Consensus 2 ~P~P~~vRP~~vL~~Tl~yL~~~~~~~---~~~~y~fi~Dr~RsIRqDltvQ~i~~~~~v~v~E~~aRf~i~~~~~L~~~ 78 (316)
T 3t5v_A 2 SPLPSDVRPPHILVKTLDYIVDNLLTT---LPESEGFLWDRMRSIRQDFTYQNYSGPEAVDCNERIVRIHLLILHIMVKS 78 (316)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHTGGG---TTTCHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCChhhcCCHHHHHHHHHHHHHHHHhc---chhhhHHHHhhhhhhccCceeeccCCchHHHHHHHHHHHHHHHHHHHhhC
Confidence 688999999999999999999977653 34689999999999999999999999999999999999999999999986
Q ss_pred CCCCCCchhhhhcHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhhccCCCchhhhHHHHhhcCCccccCCHh
Q 020581 202 CSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKE 281 (324)
Q Consensus 202 ~~~~~f~~~~~~n~eql~kcl~sL~~lY~d~~~~~~~~~ne~EF~aY~iLl~l~~~~~~l~~~L~~~l~~L~~~i~~sp~ 281 (324)
. ..|+ .++|.+|+++||++|+++|++.++.|..+|||+||+||+||++|++++ +...+..||++++++|.
T Consensus 79 ~--~~f~--~~~~~eQl~~~L~sL~~lY~d~~~~~~~~~ne~EF~aY~lL~~l~~~~------~~~~l~~Lp~~i~~~p~ 148 (316)
T 3t5v_A 79 N--VEFS--LQQELEQLHKSLITLSEIYDDVRSSGGTCPNEAEFRAYALLSKIRDPQ------YDENIQRLPKHIFQDKL 148 (316)
T ss_dssp C--CCCC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHSTTCTH------HHHHHTTSCHHHHTSHH
T ss_pred C--Cccc--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhccch------HHHHHHhCCHHHhcCHH
Confidence 4 3464 789999999999999999999988888999999999999999998753 23457789999999999
Q ss_pred HHHHHHHHHHHH---------------hCCHHHHHHHHhh-CCChHHHHHHHhhhccc
Q 020581 282 MWFARQALRYFQ---------------MGNYRRFLSTVAA-EASYLQYCIIEPYIDEA 323 (324)
Q Consensus 282 v~~Al~v~~A~~---------------~~Ny~rFF~Ll~~-~a~yL~aCll~~~f~~v 323 (324)
|++|+.+..|+. .|||+|||+|+++ .+|||++|||+.||++|
T Consensus 149 Vq~AL~l~~a~~~~~~~e~~~~~~~~~~gNY~rFFrL~~~~~~pyL~aclle~~~~~v 206 (316)
T 3t5v_A 149 VQMALCFRRVISNSAYTERGFVKTENCLNFYARFFQLMQSPSLPLLMGFFLQMHLTDI 206 (316)
T ss_dssp HHHHHHHHHHHCCTTCCCTTCCCCSSCCCCHHHHHHHHTCTTSCHHHHHHHGGGHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccccccchHHHHHHHHhccCCChHHHHHHHHHHHHH
Confidence 999999999986 4899999999975 38999999999999876
No 2
>4b0z_A RPN12, 26S proteasome regulatory subunit RPN12; protein binding, proteasome ubitquitin; HET: SGM GOL; 1.58A {Schizosaccharomyces pombe}
Probab=99.72 E-value=3.9e-17 Score=149.50 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=122.3
Q ss_pred HHHHHHHhcCCCCCchhhhHHhhhhhhhhhhhhhhhccCC--------chhHHHHHHHHHHHHHHhhhhhccCCCCCCch
Q 020581 138 LNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVN--------DKAINMFEKIVKFHVISHHKLRSSCSSSSISP 209 (324)
Q Consensus 138 ~~yLl~~l~~~~~~~~~~y~Fl~DRlRAIRQDltvQ~~~~--------~~~i~vlE~~~RF~I~s~~~L~~~~~~~~f~~ 209 (324)
++.|.+.+..+ .|+.+++-+..|++|||.|++.. ..|.+|||..+|..|..
T Consensus 11 l~~L~~~~~~~------d~~~~~~lL~~lk~~L~~~~~~~p~~~~~~~~~ar~vyE~~a~~al~~--------------- 69 (229)
T 4b0z_A 11 LNHLADLYDRK------DWNACKKELLKLKVELAKQNLFVPTSDKEKASFARNVFEYGVLVSIQT--------------- 69 (229)
T ss_dssp SHHHHHHHHTT------CHHHHHHHHHHHHHHHHHTTCSSCCSCHHHHHHHHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHHhc------cHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHc---------------
Confidence 34555556654 48999999999999999999843 36789999977765543
Q ss_pred hhhhcHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhhccCCCchhhhHHHHhhcCCcc--ccCCHhHHHHHH
Q 020581 210 LHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSP--IIKSKEMWFARQ 287 (324)
Q Consensus 210 ~~~~n~eql~kcl~sL~~lY~d~~~~~~~~~ne~EF~aY~iLl~l~~~~~~l~~~L~~~l~~L~~~--i~~sp~v~~Al~ 287 (324)
.+.+++++|+++|+.+|.+.. ..++++.||.+|+||+.|..++. . .+...+..+|+. +.++|.|++|++
T Consensus 70 ---~D~~~F~~~~~qLk~~Y~~~~---~~s~~~~e~~~~~LL~lL~~~~~--~-ef~~~le~l~~~~~~~~~~~I~~al~ 140 (229)
T 4b0z_A 70 ---CDIESFARYASQVIPFYHDSL---VPSSRMGLVTGLNLLYLLSENRI--A-EFHTALESVPDKSLFERDPYVEWVIS 140 (229)
T ss_dssp ---TCHHHHHHHHHHHHHHHSSCC---CCCTTHHHHHHHHHHHHHHTTCH--H-HHHHHHHHCSCTTHHHHCHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHccC---CCCccHHHHHHHHHHHHHHcCCc--h-HHHHHHHhcChHHHhhcCHHHHHHHH
Confidence 247899999999999998743 35789999999999998876542 2 233446667654 578999999999
Q ss_pred HHHHHHhCCHHHHHHHHhhCCC-hHHHHHHHhhhccc
Q 020581 288 ALRYFQMGNYRRFLSTVAAEAS-YLQYCIIEPYIDEA 323 (324)
Q Consensus 288 v~~A~~~~Ny~rFF~Ll~~~a~-yL~aCll~~~f~~v 323 (324)
|..|+..|||.+||++++ .+| ...+|+|+.+++.|
T Consensus 141 l~~al~~GnY~kff~l~~-~~p~~~~~~~~~~l~~~v 176 (229)
T 4b0z_A 141 LEQNVMEGAFDKVASMIR-SCNFPEFSYFMKIVMSMV 176 (229)
T ss_dssp HHHHHHTTCHHHHHHHHH-TCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHh-cCccchHHHHHHHHHHHH
Confidence 999999999999999985 554 45699999998764
No 3
>4b4t_T 26S proteasome regulatory subunit RPN12; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.1e-16 Score=150.20 Aligned_cols=148 Identities=11% Similarity=0.119 Sum_probs=95.6
Q ss_pred hhHHhhhhhhhhhhhhhhhccCCc--------------hhHHHHHHHHHHHHHHhhhhhccCCCCCCchhhhhcHHHHHH
Q 020581 155 IHDFVFDRTRSVRQDLIMQNIVND--------------KAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTK 220 (324)
Q Consensus 155 ~y~Fl~DRlRAIRQDltvQ~~~~~--------------~~i~vlE~~~RF~I~s~~~L~~~~~~~~f~~~~~~n~eql~k 220 (324)
.|+-+.+-+..++++|+.|++-.+ .|.+|||..||+. -.. .|.++|++
T Consensus 19 d~~~~~~lL~~lK~~L~~~~~l~p~~~~~~~~~~~el~~ar~v~E~~a~~s--------i~~----------~D~~~F~~ 80 (274)
T 4b4t_T 19 DYAACEKLLPPIKIELIKNNLLIPDLSIQNDIYLNDLMITKRILEVGALAS--------IQT----------FNFDSFEN 80 (274)
T ss_dssp ------------------------------------------CHHHHHHCC--------SSC----------SSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccCcCCCCCCcchhHHHHHHHHHHHHHHHHHHH--------HHc----------CCHHHHHH
Confidence 367788889999999998887421 3568999966543 332 24789999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhhccCCCchhhhHHHHhhcCC---ccccCCHhHHHHHHHHHHHHhCCH
Q 020581 221 ALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVP---SPIIKSKEMWFARQALRYFQMGNY 297 (324)
Q Consensus 221 cl~sL~~lY~d~~~~~~~~~ne~EF~aY~iLl~l~~~~~~l~~~L~~~l~~L~---~~i~~sp~v~~Al~v~~A~~~~Ny 297 (324)
|+++|+.+|.+.......++|+.||.||+||+.|..++.. .+..-+..|| +++.++|.|++|+++..|+..|||
T Consensus 81 ~~~QLk~~Y~d~~~~l~~s~~~~e~~~~~LLylL~~n~~~---efh~~Le~L~~~~~~~~~d~~Ik~al~le~al~eGnY 157 (274)
T 4b4t_T 81 YFNQLKPYYFSNNHKLSESDKKSKLISLYLLNLLSQNNTT---KFHSELQYLDKHIKNLEDDSLLSYPIKLDRWLMEGSY 157 (274)
T ss_dssp HHHHHHHHTTTTSSCSSCSHHHHHHHHHHHHHHHHHHCST---HHHHHHHSSSCSSSTTTCCHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhhccCCCCccHHHHHHHHHHHHHHcCCHH---HHHHHHHhcchhhHhHhcChHHHHHHHHHHHHHcCCH
Confidence 9999999999987666678999999999999988654422 1222344565 467889999999999999999999
Q ss_pred HHHHHHHhh-C-CChHHHHHHHhhhccc
Q 020581 298 RRFLSTVAA-E-ASYLQYCIIEPYIDEA 323 (324)
Q Consensus 298 ~rFF~Ll~~-~-a~yL~aCll~~~f~~v 323 (324)
.+||+++++ + .+++.+|+|+.+++.|
T Consensus 158 ~kff~l~~~~~~p~~~~~~f~d~l~~~i 185 (274)
T 4b4t_T 158 QKAWDLLQSGSQNISEFDSFTDILKSAI 185 (274)
T ss_dssp HHHHHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHHHHHH
Confidence 999999864 2 4689999999999865
No 4
>1rz4_A Eukaryotic translation initiation factor 3 subuni; heat analogous motif, winged-helix, biosynthetic protein; 2.10A {Homo sapiens} SCOP: a.4.5.53 a.118.1.18
Probab=86.71 E-value=2.5 Score=37.95 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=65.0
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhccCCCCCCchhhhhcHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhhcc
Q 020581 177 NDKAINMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPIHEKEAEFRSFYVLLHLDS 256 (324)
Q Consensus 177 ~~~~i~vlE~~~RF~I~s~~~L~~~~~~~~f~~~~~~n~eql~kcl~sL~~lY~d~~~~~~~~~ne~EF~aY~iLl~l~~ 256 (324)
++..+..+|+.+.-. +.++. |+ .+ -+-++ ..+|.-. +.....+..+..+|..|.+
T Consensus 22 np~~l~~le~Yv~qq-------~~~~~---YD------~~-anlal---LklYq~~-----p~~~~~~ii~~iLlk~L~~ 76 (226)
T 1rz4_A 22 NPENLATLERYVETQ-------AKENA---YD------LE-ANLAV---LKLYQFN-----PAFFQTTVTAQILLKALTN 76 (226)
T ss_dssp CGGGHHHHHHHHHHH-------HHHTC---CC------HH-HHHHH---HHHHHHS-----GGGCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH-------Hhccc---cc------HH-HHHHH---HHHHhcC-----CcccchhHHHHHHHHHHHc
Confidence 678899999865332 22222 22 11 12233 3344442 3345678888877666644
Q ss_pred CCCchhhhHHHHhhcCCccccCCHhHHHHHHHHHHHHhCCHHHHHHHHh
Q 020581 257 NGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMGNYRRFLSTVA 305 (324)
Q Consensus 257 ~~~~l~~~L~~~l~~L~~~i~~sp~v~~Al~v~~A~~~~Ny~rFF~Ll~ 305 (324)
... ..+...+--||+.+..+|.|+..+.+...+.+++|..||+.++
T Consensus 77 ~p~---~DF~~~l~LIp~~~~~~~~I~~i~~L~~~L~~~~y~~fW~~l~ 122 (226)
T 1rz4_A 77 LPH---TDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122 (226)
T ss_dssp TTS---THHHHHHHTSCHHHHTSTTHHHHHHHHHHHHTTCHHHHHHHSC
T ss_pred CCH---HHHHHHHHhCChhhhcCHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 321 1233334447888889999999999999999999999998764
No 5
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=30.46 E-value=74 Score=30.56 Aligned_cols=60 Identities=3% Similarity=0.027 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhhccCCCchhhhHHHHhh-cCCccccCCHhHHHHHHHHHHHHhCCHHHHHHHHhh
Q 020581 243 AEFRSFYVLLHLDSNGQPVGESLSLWFR-HVPSPIIKSKEMWFARQALRYFQMGNYRRFLSTVAA 306 (324)
Q Consensus 243 ~EF~aY~iLl~l~~~~~~l~~~L~~~l~-~L~~~i~~sp~v~~Al~v~~A~~~~Ny~rFF~Ll~~ 306 (324)
..+.-|.+|..|-..+.. .+..++. ..- ..+..|.+.....+..|+..+++..|+.++..
T Consensus 220 ~~~lkYlvL~aLl~~~r~---el~~~l~~~~~-~~~~~pei~~l~~L~~a~~~~dl~~f~~iL~~ 280 (394)
T 3txn_A 220 LTSLKYMLLCKIMLGQSD---DVNQLVSGKLA-ITYSGRDIDAMKSVAEASHKRSLADFQAALKE 280 (394)
T ss_dssp HHHHHHHHHHHHHTTCGG---GHHHHHHSHHH-HTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHH---HHHHHhccccc-cccCCccHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 446678788776554321 1221111 100 11368999999999999999999999998863
No 6
>2dii_A TFIIH basal transcription factor complex P62 subunit; BTF2-P62, general transcription factor IIH polypeptide 1, nuclear protein; NMR {Homo sapiens} SCOP: a.240.1.1
Probab=18.82 E-value=2.1e+02 Score=20.37 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=24.1
Q ss_pred hcHHHHHHHHHH---HHHHHHhhcCCCCCCCCHHHHHHHHH
Q 020581 213 LNLEQLTKALTS---LYNLYEANRSSKPIHEKEAEFRSFYV 250 (324)
Q Consensus 213 ~n~eql~kcl~s---L~~lY~d~~~~~~~~~ne~EF~aY~i 250 (324)
.++++-++.|.. |..+|+++-..++ -.|.|||+=+-
T Consensus 14 ~ELe~k~rlL~eN~~L~qLyk~LV~s~v--Ise~eFW~~r~ 52 (61)
T 2dii_A 14 KELEEKNRMLQEDPVLFQLYKDLVVSQV--ISAEEFWANRL 52 (61)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHTTTS--SCHHHHHHHHC
T ss_pred HhHHHHHHHHHhCHHHHHHHHHHHHhCc--CCHHHHHHHHH
Confidence 346666666654 7778999865443 34899998543
No 7
>1uap_A Procollagen C-proteinase enhancer protein; beta barrel, protein binding; NMR {Homo sapiens} SCOP: b.40.3.3
Probab=17.26 E-value=28 Score=29.50 Aligned_cols=14 Identities=14% Similarity=0.150 Sum_probs=1.0
Q ss_pred CCccccCCCCCcHH
Q 020581 68 EAIVGTCPFMCPEA 81 (324)
Q Consensus 68 ~~~vGtC~~MCPe~ 81 (324)
..+|.+|++|||--
T Consensus 12 ~~~~~~~~~~~p~p 25 (154)
T 1uap_A 12 SGLVPRGSHMLESP 25 (154)
T ss_dssp ------------CC
T ss_pred cCccccccccCCCC
Confidence 36899999999954
No 8
>2lqx_A Trypsin inhibitor BWI-2C; helical hairpin, hydrolase inhibitor; NMR {Fagopyrum esculentum}
Probab=19.92 E-value=33 Score=21.92 Aligned_cols=18 Identities=39% Similarity=0.597 Sum_probs=11.7
Q ss_pred CCccccCCCCCcH-HHHHH
Q 020581 68 EAIVGTCPFMCPE-AERLQ 85 (324)
Q Consensus 68 ~~~vGtC~~MCPe-~Er~~ 85 (324)
..+|-.|+..|-+ +||.+
T Consensus 22 temvhrcekkceekferqq 40 (41)
T 2lqx_A 22 TEMVHRCEKKCEEKFERQQ 40 (41)
Confidence 4677788888866 34443
No 9
>3r8n_O 30S ribosomal protein S15; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_O 1p87_O 2ykr_O 3oar_O 3oaq_O 3ofb_O 3ofa_O 3ofp_O 3ofx_O 3ofy_O 3ofo_O 3r8o_O 3i1m_O 2qan_O* 2qb9_O* 2qbb_O* 2qbd_O 2qbf_O 2qbh_O* 2qbj_O* ...
Probab=12.48 E-value=2.5e+02 Score=21.34 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCHHHHHHHHh
Q 020581 286 RQALRYFQMGNYRRFLSTVA 305 (324)
Q Consensus 286 l~v~~A~~~~Ny~rFF~Ll~ 305 (324)
.+++..+...|+.+|..++.
T Consensus 63 rkLL~YL~~~d~~rY~~li~ 82 (88)
T 3r8n_O 63 RKLLDYLKRKDVARYTQLIE 82 (88)
T ss_dssp HHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHH
Confidence 35777888999999999885
No 10
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=11.94 E-value=71 Score=19.25 Aligned_cols=12 Identities=50% Similarity=1.021 Sum_probs=6.3
Q ss_pred CccccCCCCCcH
Q 020581 69 AIVGTCPFMCPE 80 (324)
Q Consensus 69 ~~vGtC~~MCPe 80 (324)
.|.|||+.=|..
T Consensus 3 qitgtcpsgcsg 14 (31)
T 2hm3_A 3 QITGTCPSGCSG 14 (31)
T ss_dssp ----CCCTTCCG
T ss_pred cccccCCCCcCc
Confidence 578999988853
Done!