BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020587
         (324 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6A070|F179B_MOUSE Protein FAM179B OS=Mus musculus GN=Fam179b PE=3 SV=2
          Length = 1759

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 12/209 (5%)

Query: 67   EYIDSENLIDVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIP 126
            E +DS  L      D ++   +  L  +DW    E LN VR L+ FH + +   L +   
Sbjct: 1245 EIMDSLELRPFSKPDIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETTF 1304

Query: 127  LVVKSLKNPRSAVCKTAIMTAADIFSAYNDRMIDLLDPLLVQLLLKSSQDKRFVCEAAEK 186
             VV+ +KN RS V + A++   D+F+     M   LD  +  LL K+ +   F+ E  +K
Sbjct: 1305 AVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDSAVRALLHKAGESNTFIREDVDK 1364

Query: 187  ALVAMTTWVSPILLLPKLQPYLKNRNPRIRAKASMCFSRSV--------PRLGVEGIKEY 238
            AL AM   V+P   +  L   +      +      C ++ +        P     G K+ 
Sbjct: 1365 ALKAMVNNVTPARAVTSL---INGGQSHLHIAVRRCTAQHLADVVECMDPERISSGTKDM 1421

Query: 239  GIDKLIQVAASQLSDQLPESREAARTLLL 267
              D+L+  AA    D   E+R   R +L 
Sbjct: 1422 A-DRLLPAAAKFAQDSSQETRYYGRKMLF 1449


>sp|Q9Y4F4|F179B_HUMAN Protein FAM179B OS=Homo sapiens GN=FAM179B PE=1 SV=4
          Length = 1720

 Score = 62.0 bits (149), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%)

Query: 91   LDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKTAIMTAADI 150
            L  +DW    E LN +R L+ FH E +   L +    VV+ +KN RS V + A++  +D+
Sbjct: 1266 LADEDWEKKIEGLNFIRCLAAFHSEILNTKLHETNFAVVQEVKNLRSGVSRAAVVCLSDL 1325

Query: 151  FSAYNDRMIDLLDPLLVQLLLKSSQDKRFVCEAAEKALVAMTTWVSP 197
            F+     M   LD  +  LL K+ +   F+ E  +KAL AM   V+P
Sbjct: 1326 FTYLKKSMDQELDTTVKVLLHKAGESNTFIREDVDKALRAMVNNVTP 1372


>sp|Q3TYG6|F179A_MOUSE Protein FAM179A OS=Mus musculus GN=Fam179a PE=2 SV=1
          Length = 1002

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 1/146 (0%)

Query: 91  LDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKTAIMTAADI 150
           L+S DW +  + L N++RL+  H E +   L DV   V   + N RS V + AI T  D+
Sbjct: 500 LNSNDWQMKEKGLVNIQRLAACHSEVLGTRLHDVSLAVTAEVTNLRSKVSRLAISTLGDL 559

Query: 151 FSAYNDRMIDLLDPLLVQLLLKSSQDKRFVCEAAEKALVAMTTWVSPILLLPKLQPY-LK 209
           F      M    + ++  LL K      F+  AA +AL AM   V+P   L  L    + 
Sbjct: 560 FRVLKKNMDQEAEEIVRCLLQKMGNTSEFIQRAANRALGAMVENVTPARALVALTSAGVY 619

Query: 210 NRNPRIRAKASMCFSRSVPRLGVEGI 235
           +RNP +R   +   S  + ++G E +
Sbjct: 620 HRNPLVRKCTAKHLSAVLEQIGAEKL 645


>sp|Q6ZUX3|F179A_HUMAN Protein FAM179A OS=Homo sapiens GN=FAM179A PE=2 SV=2
          Length = 1019

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 5/148 (3%)

Query: 91  LDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKTAIMTAADI 150
           L+S DW +  + L +++RL+  H E +   L DV  +V   + N RS V   AI T  D+
Sbjct: 499 LNSSDWQMKEKGLVSIQRLAACHSEVLTGKLHDVCLVVTGEVTNLRSKVSHLAISTLGDL 558

Query: 151 FSAYNDRMIDLLDPLLVQLLLKSSQDKRFVCEAAEKALVAM---TTWVSPILLLPKLQPY 207
           F A    M    + +   LL K +    F+  AA ++L AM    T    +++L     Y
Sbjct: 559 FQALKKNMDQEAEEIARCLLQKMADTNEFIQRAAGQSLRAMVENVTLARSLVVLTSAGVY 618

Query: 208 LKNRNPRIRAKASMCFSRSVPRLGVEGI 235
             +RNP IR  A+   S  + ++G E +
Sbjct: 619 --HRNPLIRKYAAEHLSAVLEQIGAEKL 644


>sp|Q88S87|PHK2_LACPL Probable phosphoketolase 2 OS=Lactobacillus plantarum (strain ATCC
           BAA-793 / NCIMB 8826 / WCFS1) GN=lp_3551 PE=3 SV=2
          Length = 796

 Score = 34.7 bits (78), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 220 SMCFSRSVPRLGVEGIKEYG-------------IDKLIQVAASQLSDQLPESREAARTLL 266
           ++ F R    L V G +E G             +D+   V A+ L+   P   E    ++
Sbjct: 706 TIFFDRHNHNLHVHGYREEGDITTPFDMRVRNELDRFHLVKAALLA--TPAYAEKGAHVI 763

Query: 267 LELQSVYEKSHDSAPATVSDSPEMDSWE 294
            E+ S+ +K HD   A  +D PE+++W+
Sbjct: 764 QEMNSILDKHHDYIRAEGTDIPEVENWK 791


>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
           PE=1 SV=1
          Length = 938

 Score = 34.3 bits (77), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)

Query: 84  VKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKTA 143
           V T+   L S +++VVC ALN + RL   ++E     +  V+P VV+ L + + AV K A
Sbjct: 124 VNTIQKDLRSDNYLVVCAALNAICRL--INEET----IPAVLPQVVELLNHQKEAVRKKA 177

Query: 144 IM 145
           IM
Sbjct: 178 IM 179


>sp|Q9UKW4|VAV3_HUMAN Guanine nucleotide exchange factor VAV3 OS=Homo sapiens GN=VAV3
           PE=1 SV=1
          Length = 847

 Score = 33.9 bits (76), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 94  KDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKTAIMTAADIFSA 153
           +D V++C+ LNN+R  SI  KE  L        L +K+++   +A C+T  M  +++F A
Sbjct: 38  RDGVLLCQLLNNLRAHSINLKEINLRPQMSQF-LCLKNIRTFLTACCETFGMRKSELFEA 96

Query: 154 YNDRMIDLLD 163
           ++  + D+ D
Sbjct: 97  FD--LFDVRD 104


>sp|O42900|PPK19_SCHPO Serine/threonine-protein kinase ppk19 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=ppk19 PE=1 SV=1
          Length = 1706

 Score = 33.9 bits (76), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 81  DTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVC 140
           D  +  L+  L+  DW++ C    ++  LSIF     +D    ++PL++++L +P  AV 
Sbjct: 630 DLILSHLITYLNDTDWMLRCAFFESITGLSIFIGPRSVDEY--ILPLMLQALVDPEPAVL 687

Query: 141 KTAIMTAADIFSAYNDR---MIDLLDPLLVQLLLKSSQDKRFVCEAAEKALVAMTTWVSP 197
           ++ + + + +   +      ++D+L  +L  + + ++  +R        A  +       
Sbjct: 688 ESVLGSFSGLIELHLFEKLVVVDILQLVLPLVAVPNAYIRRAALSVIYSAYQSFDDIDRD 747

Query: 198 ILLLPKLQPYL 208
            ++ P L+PYL
Sbjct: 748 CIVTPLLRPYL 758


>sp|Q7S9L2|STU1_NEUCR Protein stu-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
           / CBS 708.71 / DSM 1257 / FGSC 987) GN=stu-1 PE=3 SV=1
          Length = 1136

 Score = 33.5 bits (75), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 66/129 (51%), Gaps = 18/129 (13%)

Query: 65  EVEYIDSENLIDVEDIDTSVKTLVAGLDS-KDWVVVCEALNNVRRL------SIFHKEAM 117
           E ++++++  +D  DI   +     G ++ ++W+   E++  +RRL      S FH ++ 
Sbjct: 287 EPQFVNTQRELD--DIFRDMHMFFDGRETEQNWLKREESMTKLRRLIAGNAVSDFH-DSF 343

Query: 118 LDILGDVIPLVVKSLKNPRSAVCKTAIMTAADIFSAYNDRMIDLLDPLLVQLLLKSSQDK 177
           L  L  ++  ++K++ + R+++ K       DI +AY   M  +++ +L+Q  +K     
Sbjct: 344 LAALRALLDGIIKAVTSLRTSLSKEGCALVQDIATAYGPGMDPMVE-ILMQTFVK----- 397

Query: 178 RFVCEAAEK 186
             +C A +K
Sbjct: 398 --LCAATKK 404


>sp|P31780|GSPD_AERHY Type II secretion system protein D OS=Aeromonas hydrophila GN=exeD
           PE=3 SV=2
          Length = 678

 Score = 32.7 bits (73), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 39  NVDVSLVSTHVNGNQTGNAGPGIANSEV---EYIDSENLIDVEDIDTSVKTLVAGLDSKD 95
           N+ V   +T+  G Q  NAGPGI +  +   +Y D+     +  +  +   + AG    +
Sbjct: 370 NLGVQWANTNGGGTQFTNAGPGIGSVAIAAKDYKDNGTTTGLAKLAENFNGMAAGFYQGN 429

Query: 96  WVVVCEALNNVRRLSIF---------HKEAMLDILGDVIPL 127
           W ++  AL+   +  I          +KEA  ++ G  +P+
Sbjct: 430 WAMLVTALSTNTKSDILSTPSIVTMDNKEASFNV-GQEVPV 469


>sp|Q6HJ78|RACA_BACHK Chromosome-anchoring protein RacA OS=Bacillus thuringiensis subsp.
           konkukian (strain 97-27) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|Q63BQ9|RACA_BACCZ Chromosome-anchoring protein RacA OS=Bacillus cereus (strain ZK /
           E33L) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|C1ETF1|RACA_BACC3 Chromosome-anchoring protein RacA OS=Bacillus cereus (strain
           03BB102) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|B7JML4|RACA_BACC0 Chromosome-anchoring protein RacA OS=Bacillus cereus (strain AH820)
           GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|Q81QX8|RACA_BACAN Chromosome-anchoring protein RacA OS=Bacillus anthracis GN=racA
           PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|C3LJH8|RACA_BACAC Chromosome-anchoring protein RacA OS=Bacillus anthracis (strain CDC
           684 / NRRL 3495) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|C3P8Z9|RACA_BACAA Chromosome-anchoring protein RacA OS=Bacillus anthracis (strain
           A0248) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLAAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
           SV=1
          Length = 4306

 Score = 32.3 bits (72), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 108 RLSIFHKEA-MLDILGDVIPLVVKSLKNPRSAVCKTAIM--TAADIFSAYNDRMIDLLDP 164
           RL I  +E   L  LG VIP  ++ + N     CK AI+    A  +++ + +MI    P
Sbjct: 578 RLVILLREVRQLSALGFVIPAKIQQVANVAQKFCKQAIILKQVAHFYNSIDQQMIQSQRP 637

Query: 165 LLVQLLLKSSQ 175
           +++Q  L   Q
Sbjct: 638 MMLQSALAFEQ 648


>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
           PE=1 SV=1
          Length = 4306

 Score = 32.3 bits (72), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 108 RLSIFHKEA-MLDILGDVIPLVVKSLKNPRSAVCKTAIM--TAADIFSAYNDRMIDLLDP 164
           RL I  +E   L  LG VIP  ++ + N     CK AI+    A  +++ + +MI    P
Sbjct: 578 RLVILLREVRQLSALGFVIPAKIQQVANVAQKFCKQAIILKQVAHFYNSIDQQMIQSQRP 637

Query: 165 LLVQLLLKSSQ 175
           +++Q  L   Q
Sbjct: 638 MMLQSALAFEQ 648


>sp|B9IZT9|RACA_BACCQ Chromosome-anchoring protein RacA OS=Bacillus cereus (strain Q1)
           GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLTAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|B7HQ80|RACA_BACC7 Chromosome-anchoring protein RacA OS=Bacillus cereus (strain AH187)
           GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLTAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|Q738S2|RACA_BACC1 Chromosome-anchoring protein RacA OS=Bacillus cereus (strain ATCC
           10987) GN=racA PE=3 SV=1
          Length = 180

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 76  DVEDIDTSVKTLVAGLDSKDWVVVCEALNNVRRLSIFHKEAMLDILGDVI 125
           DVE++ T V T+V  + S D+  +   LN + R     +E M D   DV+
Sbjct: 72  DVEELKTQVNTIVQNISSHDFEQLTAQLNTITRRLDRMEEQMQDKANDVV 121


>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
           SV=4
          Length = 4307

 Score = 32.0 bits (71), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 108 RLSIFHKEA-MLDILGDVIPLVVKSLKNPRSAVCKTAIM--TAADIFSAYNDRMIDLLDP 164
           RL I  +E   L  LG VIP  ++ + N     CK AI+    A  +++ + +MI    P
Sbjct: 578 RLVILLREVRQLSALGFVIPAKIQQVANIAQKFCKQAIILKQVAHFYNSIDQQMIQSQRP 637

Query: 165 LLVQLLLKSSQ 175
           +++Q  L   Q
Sbjct: 638 MMLQSALAFEQ 648


>sp|A1A5G0|CLAP1_XENTR CLIP-associating protein 1 OS=Xenopus tropicalis GN=clasp1 PE=1 SV=1
          Length = 1452

 Score = 32.0 bits (71), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 84   VKTLVAGLDSKDWVVVCEALN-NVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKT 142
            +K L   + + D+ +   A+    + +    KE++  IL D+IP +++   N  S+V K 
Sbjct: 1338 IKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKA 1397

Query: 143  AIMTAADIFSAYNDRMIDLLDPLLVQL 169
            ++     I+S   +     L P L QL
Sbjct: 1398 SVFCLVAIYSVIGEE----LKPYLAQL 1420


>sp|Q4U0G1|CLA1A_XENLA CLIP-associating protein 1-A OS=Xenopus laevis GN=clasp1-a PE=2 SV=2
          Length = 1460

 Score = 31.6 bits (70), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 84   VKTLVAGLDSKDWVVVCEALN-NVRRLSIFHKEAMLDILGDVIPLVVKSLKNPRSAVCKT 142
            +K L   + + D+ +   A+    + +    KE++  IL D+IP +++   N  S+V K 
Sbjct: 1346 IKVLCPIIQTADYPINLAAIKMQAKVIERISKESLHQILPDIIPGLLQGYDNTESSVRKA 1405

Query: 143  AIMTAADIFSAYNDRMIDLLDPLLVQL 169
            ++     I+S   +     L P L QL
Sbjct: 1406 SVFCLVAIYSVIGEE----LKPYLAQL 1428


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.129    0.359 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,160,629
Number of Sequences: 539616
Number of extensions: 4200388
Number of successful extensions: 13382
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 13350
Number of HSP's gapped (non-prelim): 62
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)