Query 020589
Match_columns 324
No_of_seqs 257 out of 539
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 05:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gj7_B Nuclear pore complex pr 98.6 1.1E-08 3.8E-13 82.9 1.7 49 261-309 7-97 (98)
2 3a9j_C Mitogen-activated prote 98.3 2.2E-07 7.6E-12 61.2 2.0 29 281-309 5-33 (34)
3 3gj3_B Nuclear pore complex pr 98.3 2.1E-07 7.2E-12 61.4 1.7 29 281-309 4-32 (33)
4 2d9g_A YY1-associated factor 2 98.2 4.2E-07 1.4E-11 65.9 2.8 30 281-310 8-37 (53)
5 2crc_A Ubiquitin conjugating e 98.2 9.8E-07 3.3E-11 63.9 4.6 39 282-320 8-46 (52)
6 3gj8_B Nuclear pore complex pr 98.2 3.2E-07 1.1E-11 73.2 1.8 50 261-310 6-91 (92)
7 1nj3_A NPL4; NZF domain, rubre 98.2 4.9E-07 1.7E-11 58.3 2.2 27 282-308 4-30 (31)
8 3b08_B Ranbp-type and C3HC4-ty 98.1 1.8E-06 6.3E-11 64.9 3.6 31 282-312 6-36 (64)
9 3gj5_B Nuclear pore complex pr 97.4 4E-05 1.4E-09 50.8 1.7 30 281-310 4-33 (34)
10 1w7p_D VPS36P, YLR417W; ESCRT- 97.3 3.2E-05 1.1E-09 79.4 0.0 52 259-310 113-206 (566)
11 2ebr_A Nuclear pore complex pr 97.2 0.00029 1E-08 49.8 4.3 36 281-316 8-43 (47)
12 2ebq_A Nuclear pore complex pr 97.1 0.00024 8.2E-09 50.3 2.6 33 281-313 8-40 (47)
13 3gj7_B Nuclear pore complex pr 96.6 0.0003 1E-08 56.8 0.0 30 283-312 8-37 (98)
14 2ebv_A Nuclear pore complex pr 96.3 0.0023 7.9E-08 47.0 2.9 29 281-309 28-56 (57)
15 1nj3_A NPL4; NZF domain, rubre 94.9 0.0069 2.4E-07 38.6 1.0 25 261-292 4-28 (31)
16 3gj8_B Nuclear pore complex pr 94.9 0.0046 1.6E-07 48.9 0.0 29 283-311 7-35 (92)
17 3gj3_B Nuclear pore complex pr 93.9 0.012 4.2E-07 38.5 0.4 16 260-275 4-19 (33)
18 2lk0_A RNA-binding protein 5; 93.7 0.019 6.7E-07 37.1 1.0 28 283-310 4-31 (32)
19 2k1p_A Zinc finger RAN-binding 93.7 0.038 1.3E-06 35.9 2.4 28 283-310 5-32 (33)
20 3cqb_A Probable protease HTPX 93.4 0.065 2.2E-06 42.9 3.9 73 22-104 27-99 (107)
21 3a9j_C Mitogen-activated prote 93.4 0.018 6.1E-07 37.4 0.4 26 261-293 6-31 (34)
22 2j9u_B VPS36, vacuolar protein 91.2 0.054 1.8E-06 41.8 0.8 38 260-309 14-51 (76)
23 2d9g_A YY1-associated factor 2 89.1 0.11 3.7E-06 37.3 0.9 29 261-296 9-37 (53)
24 1n0z_A ZNF265; zinc finger, RN 89.0 0.26 9E-06 34.1 2.8 31 281-311 11-43 (45)
25 2crc_A Ubiquitin conjugating e 88.5 0.13 4.4E-06 36.9 0.9 27 261-294 8-34 (52)
26 3c37_A Peptidase, M48 family; 86.8 0.38 1.3E-05 43.8 3.2 79 21-109 40-121 (253)
27 3b08_B Ranbp-type and C3HC4-ty 85.4 0.19 6.4E-06 37.6 0.3 15 261-275 6-20 (64)
28 1w7p_D VPS36P, YLR417W; ESCRT- 83.3 0.23 7.8E-06 51.0 0.0 30 281-310 114-152 (566)
29 3dte_A IRRE protein; radiotole 83.2 4.8 0.00016 38.0 9.1 59 34-105 54-113 (301)
30 1dx8_A Rubredoxin; electron tr 82.2 1.1 3.8E-05 33.8 3.4 32 261-292 5-48 (70)
31 3pwf_A Rubrerythrin; non heme 81.3 0.51 1.7E-05 41.0 1.5 28 283-310 137-165 (170)
32 1e8j_A Rubredoxin; iron-sulfur 80.6 0.95 3.2E-05 32.2 2.4 31 262-292 2-44 (52)
33 1dx8_A Rubredoxin; electron tr 79.8 0.76 2.6E-05 34.7 1.8 42 282-323 5-68 (70)
34 2ddf_A ADAM 17; hydrolase; HET 79.7 0.92 3.1E-05 40.9 2.7 25 83-107 177-201 (257)
35 6rxn_A Rubredoxin; electron tr 79.2 0.78 2.7E-05 32.0 1.5 10 263-272 4-13 (46)
36 4axq_A Archaemetzincin; metall 78.9 2.5 8.6E-05 36.5 5.1 23 85-107 111-133 (163)
37 2kn9_A Rubredoxin; metalloprot 78.8 1.5 5E-05 34.2 3.2 32 261-292 25-68 (81)
38 1yuz_A Nigerythrin; rubrythrin 77.1 0.86 2.9E-05 40.6 1.6 10 299-308 187-196 (202)
39 1e8j_A Rubredoxin; iron-sulfur 76.9 1.4 4.6E-05 31.4 2.3 28 283-310 2-48 (52)
40 3b8z_A Protein adamts-5; alpha 76.7 1 3.5E-05 39.6 2.0 21 87-107 140-160 (217)
41 3gj5_B Nuclear pore complex pr 76.4 0.59 2E-05 30.7 0.3 16 260-275 4-19 (34)
42 2i47_A ADAM 17; TACE-inhibitor 76.1 1.3 4.6E-05 40.6 2.7 25 83-107 183-207 (288)
43 4aw6_A CAAX prenyl protease 1 76.0 1.3 4.5E-05 44.5 2.8 22 83-104 324-345 (482)
44 1bud_A Protein (acutolysin A); 75.7 1.2 4.1E-05 38.6 2.2 21 87-107 132-152 (197)
45 1qua_A Acutolysin-C, hemorrhag 75.4 1.2 4.1E-05 38.7 2.1 20 88-107 135-154 (197)
46 4rxn_A Rubredoxin; electron tr 75.2 1.2 4.1E-05 32.0 1.7 31 262-292 2-44 (54)
47 4rxn_A Rubredoxin; electron tr 75.2 1.3 4.6E-05 31.8 1.9 28 283-310 2-48 (54)
48 2kn9_A Rubredoxin; metalloprot 75.2 1 3.6E-05 35.0 1.4 31 280-310 23-72 (81)
49 1yk4_A Rubredoxin, RD; electro 75.0 0.98 3.4E-05 32.1 1.1 30 263-292 2-43 (52)
50 2rjq_A Adamts-5; metalloprotea 74.9 1.2 4E-05 42.7 2.0 21 87-107 142-162 (378)
51 1atl_A Atrolysin C; metalloend 74.9 1.3 4.5E-05 38.6 2.2 21 87-107 135-155 (202)
52 2v4b_A Adamts-1; zymogen, prot 74.8 1.2 4.1E-05 41.2 2.0 21 87-107 142-162 (300)
53 2w15_A Zinc metalloproteinase 74.6 1.3 4.6E-05 38.5 2.2 21 87-107 135-155 (202)
54 4dd8_A Disintegrin and metallo 74.2 1.7 5.8E-05 38.1 2.7 23 85-107 130-152 (208)
55 1kuf_A Atrolysin E, metallopro 74.0 1.4 4.8E-05 38.5 2.2 21 87-107 137-157 (203)
56 6rxn_A Rubredoxin; electron tr 74.0 1.1 3.8E-05 31.2 1.2 28 283-310 3-42 (46)
57 1yp1_A FII; FII hydrolase; 1.9 74.0 1.3 4.6E-05 38.6 2.0 22 87-108 134-155 (202)
58 2rjp_A Adamts-4; metalloprotea 73.3 1.4 4.6E-05 41.2 2.0 21 87-107 142-162 (316)
59 2v3b_B Rubredoxin 2, rubredoxi 73.2 1.1 3.7E-05 32.2 1.0 31 262-292 2-44 (55)
60 2v3b_B Rubredoxin 2, rubredoxi 71.8 1.4 4.8E-05 31.7 1.3 28 283-310 2-48 (55)
61 1yk4_A Rubredoxin, RD; electro 70.3 1.6 5.3E-05 31.1 1.3 27 284-310 2-47 (52)
62 1r55_A ADAM 33; metalloproteas 69.5 1.9 6.6E-05 37.9 2.0 21 87-107 135-155 (214)
63 1s24_A Rubredoxin 2; electron 69.2 1.7 6E-05 34.2 1.5 33 260-292 32-76 (87)
64 2e3x_A Coagulation factor X-ac 68.5 2.5 8.6E-05 41.4 2.8 23 86-108 137-159 (427)
65 2g45_A Ubiquitin carboxyl-term 68.3 2.9 9.8E-05 34.9 2.7 48 262-311 5-62 (129)
66 2ero_A VAP-1, vascular apoptos 67.8 2.2 7.4E-05 41.8 2.2 23 85-107 143-165 (427)
67 2ebr_A Nuclear pore complex pr 67.8 2 6.8E-05 30.1 1.4 14 262-275 10-23 (47)
68 2dw0_A Catrocollastatin; apopt 67.0 2.5 8.6E-05 41.3 2.4 22 86-107 135-156 (419)
69 3k7n_A K-like; SVMP, hydrolase 64.2 2.8 9.7E-05 40.8 2.2 22 86-107 137-158 (397)
70 3k7l_A Atragin; SVMP, metallop 64.1 2.8 9.7E-05 41.1 2.2 22 86-107 142-163 (422)
71 2j9u_B VPS36, vacuolar protein 63.3 2.5 8.4E-05 32.6 1.2 22 281-302 14-35 (76)
72 1lko_A Rubrerythrin all-iron(I 63.1 2.2 7.6E-05 37.3 1.1 26 284-309 155-182 (191)
73 3ebh_A PFA-M1, M1 family amino 61.3 3.6 0.00012 44.2 2.5 20 85-104 292-311 (889)
74 2gtq_A Aminopeptidase N; alani 59.6 4 0.00014 43.5 2.5 20 85-104 284-303 (867)
75 2cr8_A MDM4 protein; ZF-ranbp 59.3 8.3 0.00028 27.6 3.3 30 281-310 8-37 (53)
76 2yrc_A Protein transport prote 59.2 1.3 4.5E-05 32.2 -0.9 33 264-296 10-45 (59)
77 1g12_A Peptidyl-Lys metalloend 58.4 3.3 0.00011 35.5 1.3 69 28-100 54-123 (167)
78 3u9w_A Leukotriene A-4 hydrola 58.2 2.5 8.6E-05 43.0 0.6 20 85-104 284-303 (608)
79 1s24_A Rubredoxin 2; electron 57.8 3.5 0.00012 32.4 1.2 29 282-310 33-80 (87)
80 1z5h_A Tricorn protease intera 57.4 4.7 0.00016 42.3 2.5 20 84-103 255-274 (780)
81 2ebq_A Nuclear pore complex pr 57.1 2.6 9E-05 29.5 0.4 15 261-275 9-23 (47)
82 3b34_A Aminopeptidase N; prote 56.7 4.8 0.00017 43.2 2.5 20 85-104 309-328 (891)
83 4fke_A Aminopeptidase N; zinc 56.4 4.9 0.00017 42.9 2.5 23 82-104 310-332 (909)
84 2xdt_A Endoplasmic reticulum a 55.8 5.1 0.00017 42.7 2.5 19 85-103 299-317 (897)
85 1eb6_A Neutral protease II; me 55.7 4 0.00014 35.3 1.4 44 55-101 86-135 (177)
86 2ejq_A Hypothetical protein TT 55.7 9.1 0.00031 31.9 3.5 80 21-100 4-101 (130)
87 3g5c_A ADAM 22; alpha/beta fol 54.8 4.5 0.00015 40.8 1.8 22 87-108 133-154 (510)
88 3khi_A Putative metal-dependen 51.3 8.7 0.0003 35.8 3.0 17 90-106 146-162 (267)
89 3j21_g 50S ribosomal protein L 50.7 5.4 0.00019 28.3 1.2 25 283-307 13-37 (51)
90 2c6a_A Ubiquitin-protein ligas 50.5 11 0.00037 26.4 2.6 32 283-314 12-43 (46)
91 4ger_A Gentlyase metalloprotea 48.6 7.6 0.00026 36.9 2.2 75 20-105 63-146 (304)
92 3se6_A Endoplasmic reticulum a 48.5 8.1 0.00028 41.8 2.6 20 84-103 360-379 (967)
93 3e11_A Predicted zincin-like m 48.3 7.6 0.00026 31.6 1.9 79 21-101 8-103 (114)
94 1bqb_A Protein (aureolysin); h 47.8 7.8 0.00027 36.7 2.1 26 79-104 129-154 (301)
95 2x7m_A Archaemetzincin; metall 45.7 9.9 0.00034 33.6 2.3 19 86-104 137-155 (195)
96 3dnz_A Thermolysin; hydrolase, 43.8 9.8 0.00033 36.3 2.1 74 20-104 70-152 (316)
97 3lmc_A Peptidase, zinc-depende 43.4 11 0.00038 33.9 2.3 22 85-106 140-161 (210)
98 2ebv_A Nuclear pore complex pr 40.6 8 0.00027 28.1 0.7 15 261-275 29-43 (57)
99 2xq0_A LTA-4 hydrolase, leukot 40.0 10 0.00035 38.7 1.7 17 87-103 294-310 (632)
100 3cia_A Cold-active aminopeptid 39.9 10 0.00035 38.4 1.7 17 87-103 293-309 (605)
101 1pcx_A Protein transport prote 38.6 6.6 0.00023 41.7 0.0 34 263-296 112-146 (810)
102 3ihp_A Ubiquitin carboxyl-term 38.2 16 0.00056 38.8 3.0 43 261-306 185-235 (854)
103 1m2v_B SEC24, protein transpor 36.2 7.4 0.00025 42.1 -0.0 34 263-296 228-262 (926)
104 4fgm_A Aminopeptidase N family 35.7 17 0.00058 37.1 2.5 19 85-103 264-282 (597)
105 1yuz_A Nigerythrin; rubrythrin 34.9 11 0.00037 33.3 0.8 25 262-292 170-194 (202)
106 1m2o_A SEC23, protein transpor 34.7 12 0.00042 39.3 1.4 35 263-297 53-90 (768)
107 2d74_B Translation initiation 34.4 20 0.00069 30.6 2.4 18 293-310 120-137 (148)
108 1k81_A EIF-2-beta, probable tr 34.3 7 0.00024 25.6 -0.4 24 286-309 2-32 (36)
109 3cw2_K Translation initiation 32.1 18 0.00063 30.5 1.7 27 284-310 103-136 (139)
110 3eh2_A Protein transport prote 31.2 7.7 0.00026 40.9 -0.9 33 264-296 95-128 (766)
111 2x3c_A Toxic extracellular end 31.1 14 0.00049 35.3 1.0 16 86-101 285-300 (343)
112 3efo_B SEC24 related gene fami 30.9 7.9 0.00027 40.9 -0.9 34 263-296 98-132 (770)
113 2vqx_A Metalloproteinase; ther 30.7 17 0.00058 35.0 1.5 24 81-104 149-172 (341)
114 1nee_A EIF-2-beta, probable tr 29.1 18 0.00062 30.4 1.2 18 293-310 118-135 (138)
115 2yt5_A Metal-response element- 28.8 39 0.0013 23.9 2.8 37 281-317 3-44 (66)
116 2nut_A Protein transport prote 28.0 12 0.00043 39.3 -0.0 34 263-296 62-98 (769)
117 2jsd_A Matrix metalloproteinas 27.9 22 0.00076 29.4 1.6 21 87-107 107-127 (160)
118 1cge_A Fibroblast collagenase; 27.7 26 0.0009 29.5 2.0 20 87-106 110-129 (168)
119 3eh1_A Protein transport prote 27.7 14 0.00047 39.0 0.2 32 264-296 86-118 (751)
120 3a43_A HYPD, hydrogenase nicke 26.7 18 0.00061 30.1 0.7 11 298-308 107-117 (139)
121 2ida_A Hypothetical protein; z 26.4 15 0.00051 29.5 0.2 24 284-307 18-43 (102)
122 2yql_A PHD finger protein 21A; 25.1 59 0.002 22.4 3.2 35 281-317 6-42 (56)
123 2ovx_A Matrix metalloproteinas 24.9 32 0.0011 28.7 2.0 21 87-107 110-130 (159)
124 1ylx_A Hypothetical protein AP 23.4 1E+02 0.0034 24.7 4.4 49 25-73 11-61 (103)
125 1u4g_A Elastase, pseudolysin; 23.3 27 0.00094 32.9 1.4 24 80-104 127-150 (301)
126 2kdx_A HYPA, hydrogenase/ureas 23.0 41 0.0014 26.8 2.2 25 284-308 73-100 (119)
127 2xs4_A Karilysin protease; hyd 22.8 31 0.001 28.9 1.5 21 87-107 114-134 (167)
128 2g2k_A EIF-5, eukaryotic trans 22.5 26 0.00088 30.6 0.9 18 293-310 114-131 (170)
129 1hy7_A Stromelysin-1, MMP-3; m 22.2 32 0.0011 29.0 1.5 21 87-107 112-132 (173)
130 1hv5_A Stromelysin 3; inhibiti 22.0 39 0.0013 28.2 2.0 22 86-107 111-132 (165)
131 1xwh_A Autoimmune regulator; P 22.0 73 0.0025 22.8 3.2 34 282-317 6-41 (66)
132 1rm8_A MMP-16, matrix metallop 21.9 34 0.0011 28.7 1.6 21 86-106 115-135 (169)
133 1y93_A Macrophage metalloelast 21.3 42 0.0014 28.0 2.0 21 87-107 107-127 (159)
134 2e9h_A EIF-5, eukaryotic trans 21.2 23 0.0008 30.5 0.4 17 294-310 122-138 (157)
135 3nqx_A MCP-02, secreted metall 21.1 32 0.0011 32.6 1.3 73 21-104 75-151 (306)
136 2puy_A PHD finger protein 21A; 20.7 68 0.0023 22.4 2.8 33 283-317 4-38 (60)
No 1
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=98.59 E-value=1.1e-08 Score=82.90 Aligned_cols=49 Identities=31% Similarity=0.753 Sum_probs=25.7
Q ss_pred cccccccccccccCC----------CCCC--------------------------------CCCCCccccCCCCCCCCCC
Q 020589 261 GQMWQCNMCTLLNQR----------NKSV--------------------------------GNLKGWSCKFCTLDNSSLS 298 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~----------pk~~--------------------------------~~~~~W~C~~CT~~N~~~~ 298 (324)
...|+|..|++.|.+ ||+. .+...|.|++|++.|....
T Consensus 7 ~~~W~C~~C~~~N~~~~~kC~aC~~pr~~~~~~~~~~~~~~~s~~~~~~~~~~~gfgd~fk~~~g~W~C~~C~~~N~~~~ 86 (98)
T 3gj7_B 7 GSSWQCDTCLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTWDCDTCLVQNKPEA 86 (98)
T ss_dssp ----------------------------------------------------------------CCEECTTTCCEECTTC
T ss_pred CCcccCCccccCChhhcccccccCCCCCCCcccccccCccCcccccccccccccchhhccCCCCCcccCCcCcCCChhhc
Confidence 467999999999986 4431 0224699999999999999
Q ss_pred ccccccCCccc
Q 020589 299 ERCLACGEWRY 309 (324)
Q Consensus 299 ~~C~~Cg~~r~ 309 (324)
.+|.+|+++||
T Consensus 87 ~~C~aC~tpkP 97 (98)
T 3gj7_B 87 VKCVACETPKP 97 (98)
T ss_dssp SBCTTTCCBCC
T ss_pred ceecccCCCCC
Confidence 99999999997
No 2
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=98.29 E-value=2.2e-07 Score=61.18 Aligned_cols=29 Identities=31% Similarity=0.527 Sum_probs=26.6
Q ss_pred CCCCccccCCCCCCCCCCccccccCCccc
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRY 309 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~ 309 (324)
+...|+|+.|||.|++....|++|+.+|+
T Consensus 5 ~~~~W~C~~CT~~N~~~~~~Ce~C~~~r~ 33 (34)
T 3a9j_C 5 MGAQWNCTACTFLNHPALIRCEQCEMPRH 33 (34)
T ss_dssp CCCCEECTTTCCEECTTCSBCTTTCCBSC
T ss_pred CCCcCCCCCCccccCCCCCeeCCCCCcCc
Confidence 34589999999999999999999999986
No 3
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=98.28 E-value=2.1e-07 Score=61.45 Aligned_cols=29 Identities=24% Similarity=0.665 Sum_probs=26.0
Q ss_pred CCCCccccCCCCCCCCCCccccccCCccc
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRY 309 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~ 309 (324)
+...|+|++||+.|+....+|+||.++||
T Consensus 4 ~~g~W~C~~C~~~N~~~~~kC~aC~tpkP 32 (33)
T 3gj3_B 4 GSGTWDCDTCLVQNKPEAVKCVACETPKP 32 (33)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBCC
T ss_pred CCCceeCCcccCCCccccCEEcccCCCCC
Confidence 44689999999999999999999999997
No 4
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=4.2e-07 Score=65.94 Aligned_cols=30 Identities=27% Similarity=0.695 Sum_probs=27.7
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 310 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~ 310 (324)
+...|.|+.|||+|+....+|++|+++|+.
T Consensus 8 ~~~~W~C~~CT~~N~~~~~~C~~C~~pr~~ 37 (53)
T 2d9g_A 8 DEGYWDCSVCTFRNSAEAFKCMMCDVRKGT 37 (53)
T ss_dssp CCCCEECSSSCCEECSSCSSCSSSCCCCCC
T ss_pred CCCCcCCCCCccCCCCCCCccCCCCCcCCc
Confidence 445899999999999999999999999986
No 5
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=98.24 E-value=9.8e-07 Score=63.85 Aligned_cols=39 Identities=26% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCCccccCCCCCCCCCCccccccCCcccCCCCCCCCCCC
Q 020589 282 LKGWSCKFCTLDNSSLSERCLACGEWRYSNGPPISTPGP 320 (324)
Q Consensus 282 ~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~~~~~~~~~ 320 (324)
...|+|+.|||.|.+....|++|+.+|+...-..+.+-|
T Consensus 8 ~~~W~Cp~CTf~N~p~~~~CemC~~prp~~~~~p~~~~p 46 (52)
T 2crc_A 8 PVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQP 46 (52)
T ss_dssp SSSBCCTTTCCCBCTTCSSCSSSCCCCCTTSCCCSSCCC
T ss_pred CCCccCCCcccccCCCCCeeCCCCCcCCccccCcccccc
Confidence 358999999999999999999999999995544444444
No 6
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=98.22 E-value=3.2e-07 Score=73.20 Aligned_cols=50 Identities=26% Similarity=0.692 Sum_probs=25.9
Q ss_pred cccccccccccccCC----------CCCC--------------------------CCCCCccccCCCCCCCCCCcccccc
Q 020589 261 GQMWQCNMCTLLNQR----------NKSV--------------------------GNLKGWSCKFCTLDNSSLSERCLAC 304 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~----------pk~~--------------------------~~~~~W~C~~CT~~N~~~~~~C~~C 304 (324)
...|+|+.|++.|.+ |||. .+...|.|+.|+++|+....+|.+|
T Consensus 6 ~g~W~C~~C~~~N~~~~~~C~~C~~pkp~~~~~~~~~~~~~~~~~~~~~g~~~f~~~~g~W~C~~C~~~N~a~~~~C~~C 85 (92)
T 3gj8_B 6 VGSWECPVCCVSNKAEDSRCVSCTSEKPGLVSASSSNSVPVSLPSGGCLGLDKFKKPEGSWDCEVCLVQNKADSTKCIAC 85 (92)
T ss_dssp ----------------------------------------------------------CCEECTTTCCEECSSCSBCTTT
T ss_pred CcCCCCCcCCCEeccccceecccCCCCCCCCCccccccCcccccccccccccccCCCCCcccCCcCCcCChhhccccccc
Confidence 358999999999986 5542 0235799999999999999999999
Q ss_pred CCcccC
Q 020589 305 GEWRYS 310 (324)
Q Consensus 305 g~~r~~ 310 (324)
+++||.
T Consensus 86 ~~pkp~ 91 (92)
T 3gj8_B 86 ESAKPG 91 (92)
T ss_dssp CCBCC-
T ss_pred CCCCCC
Confidence 999985
No 7
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=98.21 E-value=4.9e-07 Score=58.34 Aligned_cols=27 Identities=30% Similarity=0.658 Sum_probs=25.4
Q ss_pred CCCccccCCCCCCCCCCccccccCCcc
Q 020589 282 LKGWSCKFCTLDNSSLSERCLACGEWR 308 (324)
Q Consensus 282 ~~~W~C~~CT~~N~~~~~~C~~Cg~~r 308 (324)
...|+|+.|||.|++....|++|+.+|
T Consensus 4 ~~~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 4 SAMWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp SCCEECSSSCCEECSSCSSCSSSCCCC
T ss_pred CccccCCcccccCCCCCCccCCcCCCC
Confidence 458999999999999999999999987
No 8
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=98.10 E-value=1.8e-06 Score=64.92 Aligned_cols=31 Identities=29% Similarity=0.525 Sum_probs=28.4
Q ss_pred CCCccccCCCCCCCCCCccccccCCcccCCC
Q 020589 282 LKGWSCKFCTLDNSSLSERCLACGEWRYSNG 312 (324)
Q Consensus 282 ~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~ 312 (324)
...|+|+.|||.|.+....|++|+.+|++..
T Consensus 6 ~~~W~CP~CTf~N~p~~p~CEmC~~prp~~~ 36 (64)
T 3b08_B 6 PVGWQCPGCTFINKPTRPGCEMCCRARPETY 36 (64)
T ss_dssp CCSEECTTTCCEECTTCSBCTTTCCBCCSSC
T ss_pred CCCCcCCCccccCCCCCCccCcCCCCCCccc
Confidence 4589999999999999999999999999844
No 9
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=97.45 E-value=4e-05 Score=50.82 Aligned_cols=30 Identities=27% Similarity=0.753 Sum_probs=25.1
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 310 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~ 310 (324)
+...|.|.+|.+.|.....+|.+|.+++|.
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCet~Kpg 33 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACESAKPG 33 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCCBC--
T ss_pred CCCceECCeeEeECccccCEEcccCCcCCC
Confidence 345799999999999999999999999974
No 10
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=97.32 E-value=3.2e-05 Score=79.38 Aligned_cols=52 Identities=27% Similarity=0.553 Sum_probs=0.0
Q ss_pred cccccccccccccccCCCCCC------------------------------------------CCCCCccccCCCCCCCC
Q 020589 259 DVGQMWQCNMCTLLNQRNKSV------------------------------------------GNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 259 ~~~~~W~c~~cTl~N~~pk~~------------------------------------------~~~~~W~C~~CT~~N~~ 296 (324)
...+.|.|+.|+|.||.|.+. +....=.|+.|||.|-+
T Consensus 113 ~~~~tWvC~ICsfsN~~~~~f~~~~~~~p~C~~CGi~p~~~~~k~~i~~~~~~~~~~~~~~~~~~~~~~~CP~CTF~NHP 192 (566)
T 1w7p_D 113 DVVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPQNQFGVNSENICPACTFANHP 192 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccceeccccccCCCCCCCCCcccCCCCcccccCCCCchhhhhhhhhccccCCCcccCccccccccCCCCCcccccCCh
Confidence 345789999999999863311 01124579999999999
Q ss_pred CCccccccCCcccC
Q 020589 297 LSERCLACGEWRYS 310 (324)
Q Consensus 297 ~~~~C~~Cg~~r~~ 310 (324)
....|++||++-++
T Consensus 193 sl~~CEiCg~~L~~ 206 (566)
T 1w7p_D 193 QIGNCEICGHRLPN 206 (566)
T ss_dssp --------------
T ss_pred hhhcccccCCcCCC
Confidence 99999999999877
No 11
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.25 E-value=0.00029 Score=49.83 Aligned_cols=36 Identities=25% Similarity=0.632 Sum_probs=31.0
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccCCCCCCC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYSNGPPIS 316 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~~~~~ 316 (324)
+...|.|..|.+.|.....+|.+|+++++...|...
T Consensus 8 ~~gsW~C~~C~v~N~a~~~kC~aC~~pkpg~~p~~~ 43 (47)
T 2ebr_A 8 PEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFK 43 (47)
T ss_dssp CCSSCCCSSSCCCCCSSCSBCSSSCCBCCCCCSSCC
T ss_pred CCCeeECCeeecCCcCCcceecCcCCCCCCCccccc
Confidence 345799999999999999999999999998765443
No 12
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=0.00024 Score=50.32 Aligned_cols=33 Identities=21% Similarity=0.570 Sum_probs=29.5
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccCCCC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYSNGP 313 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~~ 313 (324)
+...|.|..|.+.|.....+|.+|+++++...|
T Consensus 8 ~~g~W~C~~C~v~N~a~~~kC~aCetpKpgs~~ 40 (47)
T 2ebq_A 8 VIGTWDCDTCLVQNKPEAIKCVACETPKPGTCV 40 (47)
T ss_dssp CSSSEECSSSCCEECSSCSBCSSSCCBCSCSSC
T ss_pred CCCceECCeeeccCccCCceecCcCCCCCCCcc
Confidence 445799999999999999999999999998654
No 13
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=96.64 E-value=0.0003 Score=56.84 Aligned_cols=30 Identities=27% Similarity=0.757 Sum_probs=0.0
Q ss_pred CCccccCCCCCCCCCCccccccCCcccCCC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYSNG 312 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~ 312 (324)
..|.|..|++.|.....+|.+|+.+|+...
T Consensus 8 ~~W~C~~C~~~N~~~~~kC~aC~~pr~~~~ 37 (98)
T 3gj7_B 8 SSWQCDTCLLQNKVTDNKCIACQAAKLPLK 37 (98)
T ss_dssp ------------------------------
T ss_pred CcccCCccccCChhhcccccccCCCCCCCc
Confidence 469999999999999999999999999754
No 14
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.0023 Score=46.99 Aligned_cols=29 Identities=21% Similarity=0.754 Sum_probs=26.4
Q ss_pred CCCCccccCCCCCCCCCCccccccCCccc
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRY 309 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~ 309 (324)
+...|.|..|-..|.....+|.+|++++|
T Consensus 28 ~~GsWeC~~C~V~N~a~~~kC~ACetpKP 56 (57)
T 2ebv_A 28 PIGSWECSVCCVSNNAEDNKCVSCMSEKP 56 (57)
T ss_dssp CSSSCCCSSSCCCCCSSCSBCSSSCCBCC
T ss_pred CCCeeeCCeeEccCccCCceeeEcCCcCC
Confidence 33579999999999999999999999987
No 15
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=94.95 E-value=0.0069 Score=38.62 Aligned_cols=25 Identities=40% Similarity=1.068 Sum_probs=19.5
Q ss_pred cccccccccccccCCCCCCCCCCCccccCCCC
Q 020589 261 GQMWQCNMCTLLNQRNKSVGNLKGWSCKFCTL 292 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~ 292 (324)
...|.|+.|||+|++. ...|.+|..
T Consensus 4 ~~~W~C~~CTf~N~~~-------~~~Ce~C~~ 28 (31)
T 1nj3_A 4 SAMWACQHCTFMNQPG-------TGHCEMCSL 28 (31)
T ss_dssp SCCEECSSSCCEECSS-------CSSCSSSCC
T ss_pred CccccCCcccccCCCC-------CCccCCcCC
Confidence 3589999999999874 456777754
No 16
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=94.88 E-value=0.0046 Score=48.94 Aligned_cols=29 Identities=24% Similarity=0.728 Sum_probs=0.0
Q ss_pred CCccccCCCCCCCCCCccccccCCcccCC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYSN 311 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~ 311 (324)
-.|.|+.|++.|...-..|.+|+++||..
T Consensus 7 g~W~C~~C~~~N~~~~~~C~~C~~pkp~~ 35 (92)
T 3gj8_B 7 GSWECPVCCVSNKAEDSRCVSCTSEKPGL 35 (92)
T ss_dssp -----------------------------
T ss_pred cCCCCCcCCCEeccccceecccCCCCCCC
Confidence 37999999999999999999999999974
No 17
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=93.95 E-value=0.012 Score=38.54 Aligned_cols=16 Identities=25% Similarity=0.802 Sum_probs=13.2
Q ss_pred ccccccccccccccCC
Q 020589 260 VGQMWQCNMCTLLNQR 275 (324)
Q Consensus 260 ~~~~W~c~~cTl~N~~ 275 (324)
...+|+|..|||.|++
T Consensus 4 ~~g~W~C~~C~~~N~~ 19 (33)
T 3gj3_B 4 GSGTWDCDTCLVQNKP 19 (33)
T ss_dssp --CCEECTTTCCEECT
T ss_pred CCCceeCCcccCCCcc
Confidence 4578999999999987
No 18
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=93.69 E-value=0.019 Score=37.07 Aligned_cols=28 Identities=29% Similarity=0.858 Sum_probs=25.7
Q ss_pred CCccccCCCCCCCCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~ 310 (324)
..|.|+.|...|...-..|-.|+.+|+.
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~pr~~ 31 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGADKFD 31 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCCBTTC
T ss_pred CCCCcCcCcCCcChhcceecCCCCcCCC
Confidence 5699999999999999999999999863
No 19
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=93.68 E-value=0.038 Score=35.91 Aligned_cols=28 Identities=29% Similarity=0.725 Sum_probs=25.9
Q ss_pred CCccccCCCCCCCCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~ 310 (324)
.-|.|+.|...|...-..|-.|+.+|+.
T Consensus 5 gDW~C~~C~~~Nfa~R~~C~~C~~pk~~ 32 (33)
T 2k1p_A 5 NDWQCKTCSNVNWARRSECNMCNTPKYA 32 (33)
T ss_dssp SSCBCSSSCCBCCTTCSBCSSSCCBTTC
T ss_pred CCcccCCCCCccccccccccccCCcCCC
Confidence 4699999999999999999999999974
No 20
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.39 E-value=0.065 Score=42.91 Aligned_cols=73 Identities=15% Similarity=0.032 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHhhhhcCc
Q 020589 22 DARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELCHNEY 101 (324)
Q Consensus 22 ~A~~~L~rlA~~v~pIMr~~~w~V~~L~Ef~P~~~~llGlN~N~G~~I~LRLR~~~~~~~flp~~~I~~vmlHELaH~~~ 101 (324)
+-.+++++++.... -..++|-.+..-.| |.-.+|...++ ..|.+-.-.- ..++.+++..||.|||+|+.+
T Consensus 27 ~L~~~~~~l~~~~~----~~~~~v~v~~~~~~-NAf~~g~~~~~-~~i~v~~gLl----~~l~~~El~aVlaHElgH~~~ 96 (107)
T 3cqb_A 27 WLLETVGRQAQQAG----IGMPTVAIYDSADI-NAFATGAKRDD-SLVAVSTGLL----HNMTRDEAEAVLAHEVSHIAN 96 (107)
T ss_dssp HHHHHHHHHHHHHT----CCCCEEEEECCSSE-EEEEECCC--C-CEEEEEHHHH----HHSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC----CCCCeEEEEECCCc-CEEEEecCCCC-CEEEEcHHHH----hhCCHHHHHHHHHHHHHHHHC
Confidence 34455555555432 11245555533222 44445544322 3455554221 245889999999999999998
Q ss_pred CCC
Q 020589 102 GPH 104 (324)
Q Consensus 102 ~~H 104 (324)
+++
T Consensus 97 ~h~ 99 (107)
T 3cqb_A 97 GDM 99 (107)
T ss_dssp TCE
T ss_pred CCH
Confidence 764
No 21
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=93.37 E-value=0.018 Score=37.42 Aligned_cols=26 Identities=35% Similarity=0.930 Sum_probs=19.6
Q ss_pred cccccccccccccCCCCCCCCCCCccccCCCCC
Q 020589 261 GQMWQCNMCTLLNQRNKSVGNLKGWSCKFCTLD 293 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~~ 293 (324)
+..|.|+.|||+|++. ...|.+|...
T Consensus 6 ~~~W~C~~CT~~N~~~-------~~~Ce~C~~~ 31 (34)
T 3a9j_C 6 GAQWNCTACTFLNHPA-------LIRCEQCEMP 31 (34)
T ss_dssp CCCEECTTTCCEECTT-------CSBCTTTCCB
T ss_pred CCcCCCCCCccccCCC-------CCeeCCCCCc
Confidence 4689999999999873 3467777543
No 22
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=91.17 E-value=0.054 Score=41.80 Aligned_cols=38 Identities=21% Similarity=0.533 Sum_probs=22.3
Q ss_pred ccccccccccccccCCCCCCCCCCCccccCCCCCCCCCCccccccCCccc
Q 020589 260 VGQMWQCNMCTLLNQRNKSVGNLKGWSCKFCTLDNSSLSERCLACGEWRY 309 (324)
Q Consensus 260 ~~~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~ 309 (324)
..+.|-|+.|+|.|+.|....+ +......|.+||-..+
T Consensus 14 ~~~tWVCpICsfsN~v~s~fdp------------~~~~lPpC~aCGIkP~ 51 (76)
T 2j9u_B 14 VVSTWVCPICMVSNETQGEFTK------------DTLPTPICINCGVPAD 51 (76)
T ss_dssp -CEEEECTTTCCEEEESSCCCT------------TCSSCCBCTTTCCBCC
T ss_pred cccceECccccccCcCccccCC------------CCCCCCcccccCccCC
Confidence 3456777777777766533211 1145567888987765
No 23
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.13 E-value=0.11 Score=37.30 Aligned_cols=29 Identities=24% Similarity=0.882 Sum_probs=20.9
Q ss_pred cccccccccccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 261 GQMWQCNMCTLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
...|.|+.|||+|.+- .=.|.+|....+.
T Consensus 9 ~~~W~C~~CT~~N~~~-------~~~C~~C~~pr~~ 37 (53)
T 2d9g_A 9 EGYWDCSVCTFRNSAE-------AFKCMMCDVRKGT 37 (53)
T ss_dssp CCCEECSSSCCEECSS-------CSSCSSSCCCCCC
T ss_pred CCCcCCCCCccCCCCC-------CCccCCCCCcCCc
Confidence 3579999999999872 2257777765553
No 24
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=88.97 E-value=0.26 Score=34.12 Aligned_cols=31 Identities=23% Similarity=0.470 Sum_probs=27.2
Q ss_pred CCCCcccc--CCCCCCCCCCccccccCCcccCC
Q 020589 281 NLKGWSCK--FCTLDNSSLSERCLACGEWRYSN 311 (324)
Q Consensus 281 ~~~~W~C~--~CT~~N~~~~~~C~~Cg~~r~~~ 311 (324)
...-|.|+ .|...|...-..|--|+++|+..
T Consensus 11 ~~GDW~C~~~~C~~~Nfa~R~~C~~C~~pr~~~ 43 (45)
T 1n0z_A 11 SDGDWICPDKKCGNVNFARRTSCDRCGREKTTG 43 (45)
T ss_dssp CSSSCBCSSTTTCCBCCSSCSBCSSSCCBCCCC
T ss_pred CCCCcCCCCCCCCCEEccccccccccCCcCCCC
Confidence 34569999 89999999999999999999763
No 25
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=88.52 E-value=0.13 Score=36.91 Aligned_cols=27 Identities=30% Similarity=0.769 Sum_probs=19.0
Q ss_pred cccccccccccccCCCCCCCCCCCccccCCCCCC
Q 020589 261 GQMWQCNMCTLLNQRNKSVGNLKGWSCKFCTLDN 294 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~~N 294 (324)
+..|.|+.|||+|++-. =.|.+|...-
T Consensus 8 ~~~W~Cp~CTf~N~p~~-------~~CemC~~pr 34 (52)
T 2crc_A 8 PVGWQCPGCTFINKPTR-------PGCEMCCRAR 34 (52)
T ss_dssp SSSBCCTTTCCCBCTTC-------SSCSSSCCCC
T ss_pred CCCccCCCcccccCCCC-------CeeCCCCCcC
Confidence 35899999999998722 2466666543
No 26
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=86.76 E-value=0.38 Score=43.78 Aligned_cols=79 Identities=13% Similarity=0.176 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCceeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCC-CHHHHHHHHHHhhh
Q 020589 21 DDARQILEKVAKQVQPIMR--KHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFF-PYEQILDTMLHELC 97 (324)
Q Consensus 21 ~~A~~~L~rlA~~v~pIMr--~~~w~V~~L~Ef~P~~~~llGlN~N~G~~I~LRLR~~~~~~~fl-p~~~I~~vmlHELa 97 (324)
.+..++|++|+..+..-+. ...|+|-++.-=.| |.-.+| |..|.|.--.- ..+ .-+.|..||.|||+
T Consensus 40 ~~l~~~l~~l~~~l~~~~~~~~~~~~v~v~~~~~~-NAfa~~-----gg~I~v~~gLl----~~l~~~~ELaaVLaHElg 109 (253)
T 3c37_A 40 PEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSV-NAFAIP-----GGRVYVHTGLL----KAADNETELAGVLAHEIN 109 (253)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCSCCEEEEECCCSC-CEEEET-----TTEEEEEHHHH----HHCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCCCC-CeeEcC-----CCeEEeeHHHH----hhCCCHHHHHHHHHHHHH
Confidence 3456677777776554333 33577776642111 322222 44676654432 234 78899999999999
Q ss_pred hcCcCCCchhHH
Q 020589 98 HNEYGPHNADFY 109 (324)
Q Consensus 98 H~~~~~H~~~F~ 109 (324)
|+.++++-..+.
T Consensus 110 H~~~~H~~~~~~ 121 (253)
T 3c37_A 110 HAVARHGTRQMT 121 (253)
T ss_dssp HHHTTHHHHHHH
T ss_pred HHHCcCHHHHHH
Confidence 999887654433
No 27
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=85.37 E-value=0.19 Score=37.62 Aligned_cols=15 Identities=40% Similarity=0.902 Sum_probs=13.6
Q ss_pred cccccccccccccCC
Q 020589 261 GQMWQCNMCTLLNQR 275 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~ 275 (324)
...|.|+.|||+|++
T Consensus 6 ~~~W~CP~CTf~N~p 20 (64)
T 3b08_B 6 PVGWQCPGCTFINKP 20 (64)
T ss_dssp CCSEECTTTCCEECT
T ss_pred CCCCcCCCccccCCC
Confidence 468999999999987
No 28
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=83.30 E-value=0.23 Score=51.05 Aligned_cols=30 Identities=23% Similarity=0.651 Sum_probs=0.0
Q ss_pred CCCCccccCCCCCCCC---------CCccccccCCcccC
Q 020589 281 NLKGWSCKFCTLDNSS---------LSERCLACGEWRYS 310 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~---------~~~~C~~Cg~~r~~ 310 (324)
....|+|++|+|.|+. ....|.+||-..+.
T Consensus 114 ~~~tWvC~ICsfsN~~~~~f~~~~~~~p~C~~CGi~p~~ 152 (566)
T 1w7p_D 114 VVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADY 152 (566)
T ss_dssp ---------------------------------------
T ss_pred cccceeccccccCCCCCCCCCcccCCCCcccccCCCCch
Confidence 4568999999999995 34589999998753
No 29
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=83.24 E-value=4.8 Score=38.00 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=42.8
Q ss_pred HHHHHhhcCc-eeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHhhhhcCcCCCc
Q 020589 34 VQPIMRKHKW-KVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELCHNEYGPHN 105 (324)
Q Consensus 34 v~pIMr~~~w-~V~~L~Ef~P~~~~llGlN~N~G~~I~LRLR~~~~~~~flp~~~I~~vmlHELaH~~~~~H~ 105 (324)
+.-|+.+.|. .|-. .+| + ...|+-.+....|.|+-+. +.....-|++|||+|++...+.
T Consensus 54 ~~~Iae~lGI~~V~~-~~L-~---~~~G~~~~~~~~I~LN~~~--------~~~rqrFTLAHELGHllLh~~~ 113 (301)
T 3dte_A 54 THSLMHGLDGITLTF-MPM-G---QRDGAYDPEHHVILINSQV--------RPERQRFTLAHEISHALLLGDD 113 (301)
T ss_dssp HHHHHHTCSSCEEEE-ECC-T---TCCEEEETTTTEEEEETTS--------CHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHCCCcEEEE-EcC-C---CCCEEEECCCcEEEEcCCC--------ChhhHHHHHHHHHHHHHhcccc
Confidence 7788888888 6653 333 2 2467766667788887653 5678889999999999876544
No 30
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=82.23 E-value=1.1 Score=33.79 Aligned_cols=32 Identities=13% Similarity=0.464 Sum_probs=18.7
Q ss_pred cccccccccccccCC----CCC-C-------CCCCCccccCCCC
Q 020589 261 GQMWQCNMCTLLNQR----NKS-V-------GNLKGWSCKFCTL 292 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~----pk~-~-------~~~~~W~C~~CT~ 292 (324)
...|.|..|-|+-.+ |.. + .-+..|.|+.|.-
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga 48 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRS 48 (70)
T ss_dssp SSCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCC
T ss_pred CceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCC
Confidence 457888888776544 221 0 2334577777664
No 31
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=81.35 E-value=0.51 Score=41.02 Aligned_cols=28 Identities=25% Similarity=0.554 Sum_probs=19.0
Q ss_pred CCccccCCCCC-CCCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLD-NSSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~-N~~~~~~C~~Cg~~r~~ 310 (324)
+.|.|+.|+|. .......|.+||.++..
T Consensus 137 ~~~~C~~CG~i~~~~~p~~CP~Cg~~~~~ 165 (170)
T 3pwf_A 137 KVYICPICGYTAVDEAPEYCPVCGAPKEK 165 (170)
T ss_dssp CEEECTTTCCEEESCCCSBCTTTCCBGGG
T ss_pred CeeEeCCCCCeeCCCCCCCCCCCCCCHHH
Confidence 56888888872 23333589999887654
No 32
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=80.55 E-value=0.95 Score=32.21 Aligned_cols=31 Identities=19% Similarity=0.631 Sum_probs=19.6
Q ss_pred ccccccccccccCC----CCC-------C-CCCCCccccCCCC
Q 020589 262 QMWQCNMCTLLNQR----NKS-------V-GNLKGWSCKFCTL 292 (324)
Q Consensus 262 ~~W~c~~cTl~N~~----pk~-------~-~~~~~W~C~~CT~ 292 (324)
+.|.|..|-|+-.+ |.. . .-+..|.|+.|.-
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 2 DIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGA 44 (52)
T ss_dssp CCEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCC
T ss_pred CcEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCC
Confidence 46889999876544 221 0 2345788888875
No 33
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=79.80 E-value=0.76 Score=34.69 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=29.5
Q ss_pred CCCccccCCCCC-C------------------CCCCccccccCCcccC---CCCCCCCCCCCCC
Q 020589 282 LKGWSCKFCTLD-N------------------SSLSERCLACGEWRYS---NGPPISTPGPYPG 323 (324)
Q Consensus 282 ~~~W~C~~CT~~-N------------------~~~~~~C~~Cg~~r~~---~~~~~~~~~~~~~ 323 (324)
.+.|.|..|.|+ . -+.-|+|-.|+..+.. ..-.+|.-+-|++
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K~~F~~~~~~~sgf~en~~ 68 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKNQFKSIKKVIAGFAENQK 68 (70)
T ss_dssp SSCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBGGGEEECCCBCCCSCCCSC
T ss_pred CceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCHHHceEccccCCChhhhcc
Confidence 458999999983 2 2456899999998877 3334455555554
No 34
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=79.69 E-value=0.92 Score=40.91 Aligned_cols=25 Identities=28% Similarity=0.211 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHhhhhcCcCCCchh
Q 020589 83 FPYEQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 83 lp~~~I~~vmlHELaH~~~~~H~~~ 107 (324)
++......||.|||.|+.-++||..
T Consensus 177 ~~~~~~a~~~AHElGHnlG~~HD~~ 201 (257)
T 2ddf_A 177 ILTKEADLVTTHELGHNFGAEHDPD 201 (257)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCT
T ss_pred cccceeeeeeeeehhhhcCcccCCC
Confidence 3445577899999999999999975
No 35
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=79.16 E-value=0.78 Score=32.00 Aligned_cols=10 Identities=30% Similarity=0.856 Sum_probs=5.0
Q ss_pred cccccccccc
Q 020589 263 MWQCNMCTLL 272 (324)
Q Consensus 263 ~W~c~~cTl~ 272 (324)
.|.|..|-|+
T Consensus 4 ~y~C~vCGyv 13 (46)
T 6rxn_A 4 KYVCNVCGYE 13 (46)
T ss_dssp CEEETTTCCE
T ss_pred EEECCCCCeE
Confidence 3555555443
No 36
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=78.91 E-value=2.5 Score=36.51 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhhhcCcCCCchh
Q 020589 85 YEQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H~~~ 107 (324)
...+..+++|||.|+.-.+|-..
T Consensus 111 ~~r~~k~~~HElGH~lGL~HC~~ 133 (163)
T 4axq_A 111 RERVVKEAVHEIGHVLGLKHCSN 133 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSS
T ss_pred HHHHHHHHHHHHHHHcCCCCCCC
Confidence 56789999999999999999543
No 37
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=78.79 E-value=1.5 Score=34.16 Aligned_cols=32 Identities=19% Similarity=0.505 Sum_probs=21.5
Q ss_pred cccccccccccccCC----CCC-------C-CCCCCccccCCCC
Q 020589 261 GQMWQCNMCTLLNQR----NKS-------V-GNLKGWSCKFCTL 292 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~----pk~-------~-~~~~~W~C~~CT~ 292 (324)
...|.|..|-|+-.+ |.. . .-+..|.|++|.-
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 468999999886544 221 1 3445788888875
No 38
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=77.07 E-value=0.86 Score=40.57 Aligned_cols=10 Identities=30% Similarity=0.637 Sum_probs=5.2
Q ss_pred ccccccCCcc
Q 020589 299 ERCLACGEWR 308 (324)
Q Consensus 299 ~~C~~Cg~~r 308 (324)
|.|.+||.++
T Consensus 187 ~~CP~C~~~k 196 (202)
T 1yuz_A 187 EKCPICFRPK 196 (202)
T ss_dssp SBCTTTCCBG
T ss_pred CCCCCCCCCh
Confidence 5555555544
No 39
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=76.89 E-value=1.4 Score=31.39 Aligned_cols=28 Identities=18% Similarity=0.478 Sum_probs=22.0
Q ss_pred CCccccCCCCCCC-------------------CCCccccccCCcccC
Q 020589 283 KGWSCKFCTLDNS-------------------SLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~N~-------------------~~~~~C~~Cg~~r~~ 310 (324)
+.|.|..|.|.-. +.-|.|-.||..+..
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K~~ 48 (52)
T 1e8j_A 2 DIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDA 48 (52)
T ss_dssp CCEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCCTTS
T ss_pred CcEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCcHHH
Confidence 4799999998432 567899999997654
No 40
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=76.69 E-value=1 Score=39.63 Aligned_cols=21 Identities=24% Similarity=0.139 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 140 ~~a~~~AHElGHnlG~~HD~~ 160 (217)
T 3b8z_A 140 HAAFTVAHEIGHLLGLSHDDS 160 (217)
T ss_dssp SHHHHHHHHHHHHTTCCCTTS
T ss_pred chhhhhHhhhhhhcCCcCCCC
Confidence 467899999999999999975
No 41
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=76.35 E-value=0.59 Score=30.69 Aligned_cols=16 Identities=25% Similarity=0.810 Sum_probs=12.9
Q ss_pred ccccccccccccccCC
Q 020589 260 VGQMWQCNMCTLLNQR 275 (324)
Q Consensus 260 ~~~~W~c~~cTl~N~~ 275 (324)
...+|+|..|++.|.+
T Consensus 4 ~~G~W~C~~C~v~N~~ 19 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKA 19 (34)
T ss_dssp --CCEECTTTCCEECS
T ss_pred CCCceECCeeEeECcc
Confidence 3478999999999986
No 42
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=76.05 E-value=1.3 Score=40.63 Aligned_cols=25 Identities=28% Similarity=0.211 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHhhhhcCcCCCchh
Q 020589 83 FPYEQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 83 lp~~~I~~vmlHELaH~~~~~H~~~ 107 (324)
++......||.|||.|+.-++||..
T Consensus 183 ~~~~~~a~~~AHElGHnlGm~HD~~ 207 (288)
T 2i47_A 183 ILTKEADLVTTHELGHNFGAEHDPD 207 (288)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cchhhHHHHHHHHHHhhcCCccCCC
Confidence 3444577899999999999999975
No 43
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=76.00 E-value=1.3 Score=44.48 Aligned_cols=22 Identities=32% Similarity=0.427 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHhhhhcCcCCC
Q 020589 83 FPYEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 83 lp~~~I~~vmlHELaH~~~~~H 104 (324)
+..++|..|+.|||.|..|++-
T Consensus 324 l~~~El~aVlaHElgH~~~~~~ 345 (482)
T 4aw6_A 324 CKNEEVLAVLGHELGHWKLGHT 345 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHcccH
Confidence 7899999999999999998763
No 44
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=75.72 E-value=1.2 Score=38.63 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 132 ~~a~~~AHElGH~lG~~HD~~ 152 (197)
T 1bud_A 132 LVAITLAHEMAHNLGVSHDEG 152 (197)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 468899999999999999976
No 45
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=75.41 E-value=1.2 Score=38.66 Aligned_cols=20 Identities=40% Similarity=0.378 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhcCcCCCchh
Q 020589 88 ILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 88 I~~vmlHELaH~~~~~H~~~ 107 (324)
+..||.|||.|+.-++||..
T Consensus 135 ~a~~~AHElGH~lG~~HD~~ 154 (197)
T 1qua_A 135 MAVTMAHELGHNLGMNHDGA 154 (197)
T ss_dssp HHHHHHHHHHHHTTCCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCC
Confidence 67899999999999999986
No 46
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=75.24 E-value=1.2 Score=32.04 Aligned_cols=31 Identities=16% Similarity=0.664 Sum_probs=19.5
Q ss_pred ccccccccccccCC----CC------CC--CCCCCccccCCCC
Q 020589 262 QMWQCNMCTLLNQR----NK------SV--GNLKGWSCKFCTL 292 (324)
Q Consensus 262 ~~W~c~~cTl~N~~----pk------~~--~~~~~W~C~~CT~ 292 (324)
+.|.|..|-|+-.+ |. .. .-+..|.|+.|.-
T Consensus 2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGV 44 (54)
T ss_dssp CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCC
T ss_pred CceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCC
Confidence 45889999775543 22 11 3446788888875
No 47
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=75.23 E-value=1.3 Score=31.78 Aligned_cols=28 Identities=21% Similarity=0.445 Sum_probs=21.6
Q ss_pred CCccccCCCCC-C------------------CCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLD-N------------------SSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~-N------------------~~~~~~C~~Cg~~r~~ 310 (324)
+.|.|.+|.|+ + -+..|+|-.||..+..
T Consensus 2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~K~~ 48 (54)
T 4rxn_A 2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGKDE 48 (54)
T ss_dssp CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBGGG
T ss_pred CceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCcHHH
Confidence 47999999983 2 2456899999998754
No 48
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=75.15 E-value=1 Score=35.00 Aligned_cols=31 Identities=19% Similarity=0.476 Sum_probs=23.7
Q ss_pred CCCCCccccCCCCC-C------------------CCCCccccccCCcccC
Q 020589 280 GNLKGWSCKFCTLD-N------------------SSLSERCLACGEWRYS 310 (324)
Q Consensus 280 ~~~~~W~C~~CT~~-N------------------~~~~~~C~~Cg~~r~~ 310 (324)
...+.|.|.+|.|+ . -+.-|+|-+||..+..
T Consensus 23 ~em~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~ 72 (81)
T 2kn9_A 23 NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSD 72 (81)
T ss_dssp SCCCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCGGG
T ss_pred CCcceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCHHH
Confidence 34568999999983 2 3567899999998765
No 49
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=75.01 E-value=0.98 Score=32.13 Aligned_cols=30 Identities=17% Similarity=0.624 Sum_probs=17.9
Q ss_pred cccccccccccCC----CC------CC--CCCCCccccCCCC
Q 020589 263 MWQCNMCTLLNQR----NK------SV--GNLKGWSCKFCTL 292 (324)
Q Consensus 263 ~W~c~~cTl~N~~----pk------~~--~~~~~W~C~~CT~ 292 (324)
.|.|..|-|+-.+ |. .. .-+..|.|+.|.-
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGA 43 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCC
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCC
Confidence 5888888775433 11 11 3345688887764
No 50
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=74.92 E-value=1.2 Score=42.67 Aligned_cols=21 Identities=24% Similarity=0.139 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||+|||.|+.-++||..
T Consensus 142 ~~a~~~AHElGHnlGm~HD~~ 162 (378)
T 2rjq_A 142 HAAFTVAHEIGHLLGLSHDDS 162 (378)
T ss_dssp THHHHHHHHHHHHTTCCCTTS
T ss_pred chhhhhhhhhhhhcCccCCCC
Confidence 367899999999999999964
No 51
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=74.86 E-value=1.3 Score=38.63 Aligned_cols=21 Identities=38% Similarity=0.303 Sum_probs=18.8
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGHnlG~~HD~~ 155 (202)
T 1atl_A 135 LMGVTMAHELGHNLGMEHDGK 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred eeEEEehhhhccccCceeCCC
Confidence 367899999999999999976
No 52
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=74.83 E-value=1.2 Score=41.22 Aligned_cols=21 Identities=38% Similarity=0.298 Sum_probs=18.6
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 142 ~~a~t~AHElGHnlG~~HD~~ 162 (300)
T 2v4b_A 142 QAAFTTAHELGHVFNMPHDDA 162 (300)
T ss_dssp THHHHHHHHHHHHTTCCCTTS
T ss_pred cceehhhhhhhhhcCCcCCCC
Confidence 367899999999999999964
No 53
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=74.64 E-value=1.3 Score=38.51 Aligned_cols=21 Identities=38% Similarity=0.316 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGH~lG~~HD~~ 155 (202)
T 2w15_A 135 WVAVTMAHELGHNLGIHHDTG 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 467899999999999999976
No 54
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=74.15 E-value=1.7 Score=38.14 Aligned_cols=23 Identities=30% Similarity=0.261 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhhhcCcCCCchh
Q 020589 85 YEQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H~~~ 107 (324)
+..+-.||.|||.|+.-++||..
T Consensus 130 ~~~~a~~~AHElGH~lG~~HD~~ 152 (208)
T 4dd8_A 130 PVGVACTMAHEMGHNLGMDHDEN 152 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGG
T ss_pred hhHHHHHHHHHHHHHcCCcCCCC
Confidence 44466899999999999999964
No 55
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=74.05 E-value=1.4 Score=38.51 Aligned_cols=21 Identities=38% Similarity=0.358 Sum_probs=19.2
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 137 ~~a~~~AHElGH~lG~~HD~~ 157 (203)
T 1kuf_A 137 MVAVTMTHELGHNLGMEHDDK 157 (203)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHhhhhcCCCCCCC
Confidence 477899999999999999987
No 56
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=73.99 E-value=1.1 Score=31.20 Aligned_cols=28 Identities=18% Similarity=0.456 Sum_probs=21.6
Q ss_pred CCccccCCCCCC------------CCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLDN------------SSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~N------------~~~~~~C~~Cg~~r~~ 310 (324)
+.|.|.+|.|.- -+.-|.|-.||..+..
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~k~~ 42 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQ 42 (46)
T ss_dssp CCEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCBGGG
T ss_pred CEEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCcHHH
Confidence 579999999832 3556899999987653
No 57
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=73.97 E-value=1.3 Score=38.55 Aligned_cols=22 Identities=32% Similarity=0.332 Sum_probs=19.3
Q ss_pred HHHHHHHHhhhhcCcCCCchhH
Q 020589 87 QILDTMLHELCHNEYGPHNADF 108 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~F 108 (324)
.+..||.|||.|+.-++||...
T Consensus 134 ~~a~~~AHElGH~lG~~HD~~~ 155 (202)
T 1yp1_A 134 LMAVVMAHELGHNLGMLHDDGY 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCC
Confidence 3678999999999999999763
No 58
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=73.33 E-value=1.4 Score=41.20 Aligned_cols=21 Identities=29% Similarity=0.107 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 142 ~~a~t~AHElGHnlGm~HD~~ 162 (316)
T 2rjp_A 142 QSAFTAAHQLGHVFNMLHDNS 162 (316)
T ss_dssp THHHHHHHHHHHHTTCCCTTS
T ss_pred hHHHHHHHHHHhhcCccCCCC
Confidence 567899999999999999975
No 59
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=73.18 E-value=1.1 Score=32.25 Aligned_cols=31 Identities=23% Similarity=0.731 Sum_probs=19.3
Q ss_pred ccccccccccccCC----CCC------C--CCCCCccccCCCC
Q 020589 262 QMWQCNMCTLLNQR----NKS------V--GNLKGWSCKFCTL 292 (324)
Q Consensus 262 ~~W~c~~cTl~N~~----pk~------~--~~~~~W~C~~CT~ 292 (324)
..|.|..|-|+-.+ |.. . .-+..|.|+.|.-
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga 44 (55)
T 2v3b_B 2 RKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGV 44 (55)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCC
T ss_pred CcEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 46889999775543 221 0 2345788888875
No 60
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=71.81 E-value=1.4 Score=31.66 Aligned_cols=28 Identities=21% Similarity=0.618 Sum_probs=21.6
Q ss_pred CCccccCCCCC-C------------------CCCCccccccCCcccC
Q 020589 283 KGWSCKFCTLD-N------------------SSLSERCLACGEWRYS 310 (324)
Q Consensus 283 ~~W~C~~CT~~-N------------------~~~~~~C~~Cg~~r~~ 310 (324)
+.|.|..|.|. . -+.-|.|-.||..+..
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~K~~ 48 (55)
T 2v3b_B 2 RKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKID 48 (55)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCCGGG
T ss_pred CcEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCCHHH
Confidence 46999999982 2 3566899999998754
No 61
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=70.34 E-value=1.6 Score=31.08 Aligned_cols=27 Identities=26% Similarity=0.439 Sum_probs=20.9
Q ss_pred CccccCCCCC-C------------------CCCCccccccCCcccC
Q 020589 284 GWSCKFCTLD-N------------------SSLSERCLACGEWRYS 310 (324)
Q Consensus 284 ~W~C~~CT~~-N------------------~~~~~~C~~Cg~~r~~ 310 (324)
.|.|..|.|. . -+.-|.|-.||..+..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K~~ 47 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSE 47 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBGGG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCCHHH
Confidence 6999999982 2 3567899999987653
No 62
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=69.49 E-value=1.9 Score=37.92 Aligned_cols=21 Identities=33% Similarity=0.351 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..||.|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGHnlG~~HD~~ 155 (214)
T 1r55_A 135 GAAATMAHEIGHSLGLSHDPD 155 (214)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHHhcCCcCCCC
Confidence 457999999999999999985
No 63
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=69.25 E-value=1.7 Score=34.16 Aligned_cols=33 Identities=18% Similarity=0.516 Sum_probs=21.8
Q ss_pred ccccccccccccccCC----CCC-------C-CCCCCccccCCCC
Q 020589 260 VGQMWQCNMCTLLNQR----NKS-------V-GNLKGWSCKFCTL 292 (324)
Q Consensus 260 ~~~~W~c~~cTl~N~~----pk~-------~-~~~~~W~C~~CT~ 292 (324)
....|.|..|-|+-.+ |.. . .-+..|.|+.|.-
T Consensus 32 ~m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 32 AYLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp CCCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred CCceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCC
Confidence 3468999999886543 221 1 3446788888875
No 64
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=68.48 E-value=2.5 Score=41.44 Aligned_cols=23 Identities=30% Similarity=0.170 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhhhcCcCCCchhH
Q 020589 86 EQILDTMLHELCHNEYGPHNADF 108 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~~F 108 (324)
..+..||.|||.|+.-++||...
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~~ 159 (427)
T 2e3x_A 137 FKTAVIMAHELSHNLGMYHDGKN 159 (427)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCTT
T ss_pred ceeeeehHHHHHHhhCCccCCCC
Confidence 45678999999999999999763
No 65
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=68.32 E-value=2.9 Score=34.93 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=30.6
Q ss_pred cccc---ccccccccCC---CCC-CCCCCCccccCCCCCCCCCCccccccCCc---ccCC
Q 020589 262 QMWQ---CNMCTLLNQR---NKS-VGNLKGWSCKFCTLDNSSLSERCLACGEW---RYSN 311 (324)
Q Consensus 262 ~~W~---c~~cTl~N~~---pk~-~~~~~~W~C~~CT~~N~~~~~~C~~Cg~~---r~~~ 311 (324)
+.|+ |+.|.+++.. +.+ ..++..|.|..|... ..+|.|-.||.- |+++
T Consensus 5 ~~W~~e~~~~C~h~~~l~q~~~~~~~~~~~~~C~~C~~~--~~LwlCL~CG~vgCgr~~~ 62 (129)
T 2g45_A 5 QAWDGEVRQVSKHAFSLKQLDNPARIPPCGWKCSKCDMR--ENLWLNLTDGSILCGRRYF 62 (129)
T ss_dssp ------CCEECTTTTTCCCCSSCCCCCCCBCCCSSSSCC--SSEEEETTTCCEEECCBCT
T ss_pred HhhcCCCCCCCCCcCcccccccccccCCCCCcCccccCc--CceEEeccCCccccCcccc
Confidence 4587 8889886533 111 134457999999865 368999999984 7764
No 66
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=67.83 E-value=2.2 Score=41.84 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhhhcCcCCCchh
Q 020589 85 YEQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H~~~ 107 (324)
...+..||.|||.|+.-++||..
T Consensus 143 ~~~~a~t~AHElGHnlG~~HD~~ 165 (427)
T 2ero_A 143 HHLVAIAMAHEMGHNLGMDHDKD 165 (427)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHHHHHHhcCCccCCC
Confidence 34667899999999999999976
No 67
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.80 E-value=2 Score=30.07 Aligned_cols=14 Identities=29% Similarity=1.023 Sum_probs=13.0
Q ss_pred ccccccccccccCC
Q 020589 262 QMWQCNMCTLLNQR 275 (324)
Q Consensus 262 ~~W~c~~cTl~N~~ 275 (324)
.+|+|..|.+.|.+
T Consensus 10 gsW~C~~C~v~N~a 23 (47)
T 2ebr_A 10 GSWDCELCLVQNKA 23 (47)
T ss_dssp SSCCCSSSCCCCCS
T ss_pred CeeECCeeecCCcC
Confidence 68999999999987
No 68
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=67.03 E-value=2.5 Score=41.31 Aligned_cols=22 Identities=27% Similarity=0.223 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhhhcCcCCCchh
Q 020589 86 EQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~~ 107 (324)
..+..||.|||.|+.-++||..
T Consensus 135 ~~~a~t~AHElGHnlG~~HD~~ 156 (419)
T 2dw0_A 135 LVVAVIMAHEMGHNLGINHDSG 156 (419)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhhhhhHHHHHHHHcCCccCCC
Confidence 4667899999999999999976
No 69
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=64.16 E-value=2.8 Score=40.78 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhhcCcCCCchh
Q 020589 86 EQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~~ 107 (324)
..+..||.|||.|+.-++||..
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~ 158 (397)
T 3k7n_A 137 SLVASTITHELGHNLGIHHDKA 158 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred chhhhhHHHHHHHHcCCccCCC
Confidence 3567899999999999999975
No 70
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=64.09 E-value=2.8 Score=41.14 Aligned_cols=22 Identities=32% Similarity=0.302 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhhcCcCCCchh
Q 020589 86 EQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~~ 107 (324)
..+..||.|||.|+.-++||..
T Consensus 142 ~~~a~t~AHElGHnlGm~HD~~ 163 (422)
T 3k7l_A 142 RMVAITMAHEMGHNLGMNHDRG 163 (422)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCS
T ss_pred hhhhHHHHHHHHHHcCCccCCC
Confidence 3577899999999999999965
No 71
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=63.26 E-value=2.5 Score=32.56 Aligned_cols=22 Identities=23% Similarity=0.591 Sum_probs=17.7
Q ss_pred CCCCccccCCCCCCCCCCcccc
Q 020589 281 NLKGWSCKFCTLDNSSLSERCL 302 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~ 302 (324)
....|.|++|.+.|+.....+.
T Consensus 14 ~~~tWVCpICsfsN~v~s~fdp 35 (76)
T 2j9u_B 14 VVSTWVCPICMVSNETQGEFTK 35 (76)
T ss_dssp -CEEEECTTTCCEEEESSCCCT
T ss_pred cccceECccccccCcCccccCC
Confidence 3457999999999998877665
No 72
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=63.06 E-value=2.2 Score=37.33 Aligned_cols=26 Identities=27% Similarity=0.685 Sum_probs=14.3
Q ss_pred CccccCCCCCCC--CCCccccccCCccc
Q 020589 284 GWSCKFCTLDNS--SLSERCLACGEWRY 309 (324)
Q Consensus 284 ~W~C~~CT~~N~--~~~~~C~~Cg~~r~ 309 (324)
.|.|..|+|.-. .....|.+||.++.
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~~k~ 182 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAHPKA 182 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCCBGG
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcCCHH
Confidence 466666665311 11127777777654
No 73
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=61.33 E-value=3.6 Score=44.25 Aligned_cols=20 Identities=35% Similarity=0.529 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhhhcCcCCC
Q 020589 85 YEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H 104 (324)
+..|..|++|||||.++||-
T Consensus 292 ~~~i~~vIAHElAHQWFGNl 311 (889)
T 3ebh_A 292 YARILTVVGHEYFHQYTGNR 311 (889)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHHhcCe
Confidence 45788999999999999973
No 74
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=59.60 E-value=4 Score=43.53 Aligned_cols=20 Identities=35% Similarity=0.423 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhhhcCcCCC
Q 020589 85 YEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H 104 (324)
+..|..|+.|||+|.++||-
T Consensus 284 ~~~i~~vIaHElAHqWfGnl 303 (867)
T 2gtq_A 284 FEGIESVVGHEYFHNWTGNR 303 (867)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHhcCcE
Confidence 56788999999999999973
No 75
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=59.31 E-value=8.3 Score=27.58 Aligned_cols=30 Identities=27% Similarity=0.564 Sum_probs=27.3
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 310 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~ 310 (324)
..+.|.|.-|--.|++..--|.-|-.-|.+
T Consensus 8 ~eD~WkC~~C~k~N~Pl~ryC~rCwaLRk~ 37 (53)
T 2cr8_A 8 SEDEWQCTECKKFNSPSKRYCFRCWALRKD 37 (53)
T ss_dssp CSCCEECSSSCCEECSSCCBCTTTCCBCCC
T ss_pred CcceeecccccccCCCccchhHHHHHhhcc
Confidence 446899999999999999999999999988
No 76
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=59.18 E-value=1.3 Score=32.24 Aligned_cols=33 Identities=30% Similarity=0.596 Sum_probs=19.9
Q ss_pred ccccc--c-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 264 WQCNM--C-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 264 W~c~~--c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
--|.. | +|+||==+-......|.|.+|...|..
T Consensus 10 vRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N~~ 45 (59)
T 2yrc_A 10 VLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQF 45 (59)
T ss_dssp CBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEEEC
T ss_pred cccCCCCCCeEECCceEEECCCCEEEcccCCCcCCC
Confidence 45665 7 688875111112346888888887753
No 77
>1g12_A Peptidyl-Lys metalloendopeptidase; zinc cordinate,metalloprotease, hydrolase; HET: MAN; 1.60A {Grifola frondosa} SCOP: d.92.1.12 PDB: 1ge5_A* 1ge6_A* 1ge7_A*
Probab=58.39 E-value=3.3 Score=35.51 Aligned_cols=69 Identities=10% Similarity=-0.081 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecCCCc-EEEEEecCCCCCCCCCCHHHHHHHHHHhhhhcC
Q 020589 28 EKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIGGGA-EVKLRLRRPNREWDFFPYEQILDTMLHELCHNE 100 (324)
Q Consensus 28 ~rlA~~v~pIMr~~~w~V~~L~Ef~P~~~~llGlN~N~G~-~I~LRLR~~~~~~~flp~~~I~~vmlHELaH~~ 100 (324)
..|+..+.-|-.+.+-.+..-+. +.....++.-.-... +|.|--..=..+. .-...-..||||||+|+.
T Consensus 54 ~~V~~~f~~i~~~~~~~~~~~C~--C~~~~~~Ay~~p~~~~~i~~Cp~f~~~p~--~~~~s~a~tllHE~tH~~ 123 (167)
T 1g12_A 54 STVLQHYTDMNSNDFSSYSFDCT--CTAAGTFAYVYPNRFGTVYLCGAFWKAPT--TGTDSQAGTLVHESSHFT 123 (167)
T ss_dssp HHHHHHHHHHHTSCGGGCEEECC--CCCSSCCEECCTTSTTEEEECGGGGGSCS--SSTTCHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhccCCceeEeec--cCCCCcEEEEeCCCCCeEEECCchhcCCC--CCCCCchhhHHHhhhccc
Confidence 34555555555544433333333 222355665432111 4544322110000 112356899999999996
No 78
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=58.22 E-value=2.5 Score=42.96 Aligned_cols=20 Identities=20% Similarity=0.332 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhhhcCcCCC
Q 020589 85 YEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H 104 (324)
-..+..|++|||||..+||-
T Consensus 284 ~~~~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 284 DKSLSNVIAHEISHSWTGNL 303 (608)
T ss_dssp SSTTTHHHHHHHHTTTBTTT
T ss_pred cchhHHHHHHHhhhhhhcCc
Confidence 34577899999999999975
No 79
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=57.79 E-value=3.5 Score=32.42 Aligned_cols=29 Identities=21% Similarity=0.414 Sum_probs=22.3
Q ss_pred CCCccccCCCCC-------------------CCCCCccccccCCcccC
Q 020589 282 LKGWSCKFCTLD-------------------NSSLSERCLACGEWRYS 310 (324)
Q Consensus 282 ~~~W~C~~CT~~-------------------N~~~~~~C~~Cg~~r~~ 310 (324)
...|.|..|.|+ .-+.-|.|-.||..+..
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~ 80 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKED 80 (87)
T ss_dssp CCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCCGGG
T ss_pred CceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCCHHH
Confidence 457999999972 23456899999997754
No 80
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=57.43 E-value=4.7 Score=42.33 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHhhhhcCcCC
Q 020589 84 PYEQILDTMLHELCHNEYGP 103 (324)
Q Consensus 84 p~~~I~~vmlHELaH~~~~~ 103 (324)
.+..+..|++|||||..+||
T Consensus 255 ~~~~~~~viaHElaHqWfGn 274 (780)
T 1z5h_A 255 VKRNSANVIAHEIAHQWFGD 274 (780)
T ss_dssp HHHHHHHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 35568899999999999996
No 81
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.06 E-value=2.6 Score=29.50 Aligned_cols=15 Identities=27% Similarity=0.820 Sum_probs=13.3
Q ss_pred cccccccccccccCC
Q 020589 261 GQMWQCNMCTLLNQR 275 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~ 275 (324)
..+|+|..|.+.|.+
T Consensus 9 ~g~W~C~~C~v~N~a 23 (47)
T 2ebq_A 9 IGTWDCDTCLVQNKP 23 (47)
T ss_dssp SSSEECSSSCCEECS
T ss_pred CCceECCeeeccCcc
Confidence 368999999999987
No 82
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=56.73 E-value=4.8 Score=43.20 Aligned_cols=20 Identities=35% Similarity=0.395 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhhhcCcCCC
Q 020589 85 YEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H 104 (324)
+..|..|+.|||+|.++||-
T Consensus 309 ~~~i~~vIAHElAHqWFGNl 328 (891)
T 3b34_A 309 YLDIERVIGHEYFHNWTGNR 328 (891)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 56788999999999999963
No 83
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=56.44 E-value=4.9 Score=42.88 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=19.1
Q ss_pred CCCHHHHHHHHHHhhhhcCcCCC
Q 020589 82 FFPYEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 82 flp~~~I~~vmlHELaH~~~~~H 104 (324)
......|..|++|||||..+||-
T Consensus 310 ~~~~~~~~~viaHElAHqWFGnl 332 (909)
T 4fke_A 310 ISNKERVVTVIAHELAHQWFGNL 332 (909)
T ss_dssp HHHHHHHHHHHHHHHHTTTBTTT
T ss_pred hHHHHHHHHHHHHHHHhhhhcCe
Confidence 34456788999999999999986
No 84
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=55.84 E-value=5.1 Score=42.73 Aligned_cols=19 Identities=37% Similarity=0.422 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhhhhcCcCC
Q 020589 85 YEQILDTMLHELCHNEYGP 103 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~ 103 (324)
...|..|++|||||..+||
T Consensus 299 ~~~~~~viaHElAHqWFGn 317 (897)
T 2xdt_A 299 KLGITMTVAHELAHQWFGN 317 (897)
T ss_dssp HHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4578999999999999997
No 85
>1eb6_A Neutral protease II; metalloproteinase, zinc, hydrolase; 1.0A {Aspergillus oryzae} SCOP: d.92.1.12
Probab=55.72 E-value=4 Score=35.30 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=25.0
Q ss_pred CCCceeeecCCCcEEEEEe------cCCCCCCCCCCHHHHHHHHHHhhhhcCc
Q 020589 55 NPSLLGINIGGGAEVKLRL------RRPNREWDFFPYEQILDTMLHELCHNEY 101 (324)
Q Consensus 55 ~~~llGlN~N~G~~I~LRL------R~~~~~~~flp~~~I~~vmlHELaH~~~ 101 (324)
++..++..+.....|.|-- +.-. ..........||||||+|+..
T Consensus 86 ~~~~~Ayt~~~~~~i~~Cp~ff~~~~~~~---~~c~~~~~a~tllHE~tH~~~ 135 (177)
T 1eb6_A 86 EPNVLAYTLPSKNEIANCDIYYSELPPLA---QKCHAQDQATTTLHEFTHAPG 135 (177)
T ss_dssp CTTCCEEEEGGGTEEEECHHHHHHCCSSC---CSTTCCCHHHHHHHHHHTCTT
T ss_pred CCCceEEEecCCCeEEECchHHhcCCccc---ccccCCcHHHHHHHHHHhhhh
Confidence 3556676554434565532 2110 111223678999999999974
No 86
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=55.68 E-value=9.1 Score=31.90 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCC----CCCceeeecC------------CCcEEEEEecCCCCC--CCC
Q 020589 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPA----NPSLLGINIG------------GGAEVKLRLRRPNRE--WDF 82 (324)
Q Consensus 21 ~~A~~~L~rlA~~v~pIMr~~~w~V~~L~Ef~P~----~~~llGlN~N------------~G~~I~LRLR~~~~~--~~f 82 (324)
++...+.....+.+-+-++++==.|..+.|=+|. +..+||+-.. .+.+|.|=-|.--+. ...
T Consensus 4 e~Fe~lv~~a~~~LP~~~~~~l~~V~i~Ved~p~~~~~~~~lLGly~g~~vpl~~r~~~~~P~~I~lYR~pi~~~~~~~e 83 (130)
T 2ejq_A 4 EAFVELVERLWEEVPEDFKRGLQGVHVFPEAKPEPGLEGVWRLGEYLDPGPPSAFGGFEDLGRHIALYYGSFLEVAGEGF 83 (130)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCCEEEEESSCCBCSSSTTCBCCEEEECCCSCBTTBCCGGGCCEEEEEHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHhhHHHHHHcCCcEEEEecCCCcccCCcceeeeccCCCcCccccccCCCCCEEEEehHHHHHHhCChh
Confidence 3444555555555555555433377777777743 2788999775 245666643321110 112
Q ss_pred CCHHHHHHHHHHhhhhcC
Q 020589 83 FPYEQILDTMLHELCHNE 100 (324)
Q Consensus 83 lp~~~I~~vmlHELaH~~ 100 (324)
--.+.|..|++||++|..
T Consensus 84 eL~~~V~~tvvHEiaHhf 101 (130)
T 2ejq_A 84 DWEAEVWETMLHELRHHL 101 (130)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHH
Confidence 335679999999999965
No 87
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=54.85 E-value=4.5 Score=40.83 Aligned_cols=22 Identities=18% Similarity=0.015 Sum_probs=19.3
Q ss_pred HHHHHHHHhhhhcCcCCCchhH
Q 020589 87 QILDTMLHELCHNEYGPHNADF 108 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~F 108 (324)
.+..||.|||.|+.-++||..-
T Consensus 133 ~~A~t~AHELGHnLGm~HD~~~ 154 (510)
T 3g5c_A 133 LMAVTLAQSLAHNIGIISDKRK 154 (510)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHH
T ss_pred hhhHHHHHHHHHHcCCccCCCC
Confidence 5778999999999999999753
No 88
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=51.28 E-value=8.7 Score=35.82 Aligned_cols=17 Identities=18% Similarity=0.329 Sum_probs=13.2
Q ss_pred HHHHHhhhhcCcCCCch
Q 020589 90 DTMLHELCHNEYGPHNA 106 (324)
Q Consensus 90 ~vmlHELaH~~~~~H~~ 106 (324)
.|++||+||-..+-.+.
T Consensus 146 NvvIHEFAHkLD~~~G~ 162 (267)
T 3khi_A 146 NLVVHEVAHKLDTRNGD 162 (267)
T ss_dssp CHHHHHHHHHHHTTTSC
T ss_pred chHHhHHHHHHHHhcCC
Confidence 79999999977665544
No 89
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.71 E-value=5.4 Score=28.34 Aligned_cols=25 Identities=28% Similarity=0.573 Sum_probs=22.3
Q ss_pred CCccccCCCCCCCCCCccccccCCc
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEW 307 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~ 307 (324)
....|+.|.-.|+...|.|.-||..
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 4578999999999999999999975
No 90
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=50.54 E-value=11 Score=26.37 Aligned_cols=32 Identities=28% Similarity=0.546 Sum_probs=26.7
Q ss_pred CCccccCCCCCCCCCCccccccCCcccCCCCC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYSNGPP 314 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~~~~~ 314 (324)
..|.|.-|--.|++..-.|.-|-+-|.+-=|+
T Consensus 12 D~WkC~~C~~~N~Pl~r~C~rCw~LRk~Wlp~ 43 (46)
T 2c6a_A 12 DYWKCTSCNEMNPPLPSHCNRCWALRENWLPE 43 (46)
T ss_dssp GCEECTTTCCEECSSCSSCTTTCCCCSSCSCC
T ss_pred ceEecccccccCCCccchhhHHHhhccccCCc
Confidence 57999999999999999999999888884444
No 91
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=48.62 E-value=7.6 Score=36.88 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCc-----eeeeecccCCCCCCceeeecC----CCcEEEEEecCCCCCCCCCCHHHHHH
Q 020589 20 EDDARQILEKVAKQVQPIMRKHKW-----KVRILSEFCPANPSLLGINIG----GGAEVKLRLRRPNREWDFFPYEQILD 90 (324)
Q Consensus 20 ~~~A~~~L~rlA~~v~pIMr~~~w-----~V~~L~Ef~P~~~~llGlN~N----~G~~I~LRLR~~~~~~~flp~~~I~~ 90 (324)
.-+|...+.++-+-.+-++.+..+ ++..-.= .|.|.+ .|+.+.+ = +.+-..|.|+..-+.
T Consensus 63 avdA~~~~~~t~d~y~~~~grnsid~~G~~l~~~VH--------yg~~y~NAfW~g~~m~f--G-DGdg~~f~~~~~slD 131 (304)
T 4ger_A 63 GVDAHTYAAKTYDYYKAKFGRNSIDGRGLQLRSTVH--------YGSRYNNAFWNGSQMTY--G-DGDGSTFIAFSGDPD 131 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTTTSSCCCEEEEEE--------ESSSCCCEEECSSCEEE--E-CCCSSSBCCGGGSHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCeEEEEEe--------CCCCccCceecCCEEEE--e-CCCCccccccccccc
Confidence 445666777777766666666554 2222111 122221 2443222 1 123346899987889
Q ss_pred HHHHhhhhcCcCCCc
Q 020589 91 TMLHELCHNEYGPHN 105 (324)
Q Consensus 91 vmlHELaH~~~~~H~ 105 (324)
|+.|||+|=|.-.+.
T Consensus 132 VvaHEltHGVt~~ta 146 (304)
T 4ger_A 132 VVGHELTHGVTEYTS 146 (304)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred hhhhccccccccccC
Confidence 999999998866654
No 92
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=48.51 E-value=8.1 Score=41.78 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHhhhhcCcCC
Q 020589 84 PYEQILDTMLHELCHNEYGP 103 (324)
Q Consensus 84 p~~~I~~vmlHELaH~~~~~ 103 (324)
....|..|++|||||..+||
T Consensus 360 ~k~~~~~vIaHElAHqWFGn 379 (967)
T 3se6_A 360 DKLWVTRVIAHELAHQWFGN 379 (967)
T ss_dssp HHHHHHHHHHHHHGGGTBTT
T ss_pred hhHhHHHHHHHHHHHHHhcC
Confidence 34568899999999999997
No 93
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=48.26 E-value=7.6 Score=31.57 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeec----------CCC---cEEEEEecCCCCCCCCCC---
Q 020589 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINI----------GGG---AEVKLRLRRPNREWDFFP--- 84 (324)
Q Consensus 21 ~~A~~~L~rlA~~v~pIMr~~~w~V~~L~Ef~P~~~~llGlN~----------N~G---~~I~LRLR~~~~~~~flp--- 84 (324)
+..-.+.....+.+-+-+++.==.|..+.|=+|.++.+||+-. ..| .+|.|=-|.--+ ...+
T Consensus 8 e~Fd~lv~~a~~~Lp~~~~~~l~~v~i~Ved~P~~p~llgly~gvpL~~r~~~~~g~~p~rI~lYR~Pi~~--~~~~~~e 85 (114)
T 3e11_A 8 DRFDELVAEALDGIPEEFARAMRNVAVFVEDEPDDPELLGLYVGIPLTERTTAYGGVLPDRIIIYRNTICA--LCETESE 85 (114)
T ss_dssp HHHHHHHHHHHHTSCGGGTGGGTTEEEEEESSCSSTTCSEEEECCCGGGSBCTTSCBCCEEEEEEHHHHHH--TCSSHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHcCCcEEEEeCCCcCcccccCccCcCCccccCCCCCCCCCEEEEehHHHHH--HhCChhH
Confidence 3444444444444444444333346666665576889999532 122 455553332111 1112
Q ss_pred -HHHHHHHHHHhhhhcCc
Q 020589 85 -YEQILDTMLHELCHNEY 101 (324)
Q Consensus 85 -~~~I~~vmlHELaH~~~ 101 (324)
.+.|..|++||++|..-
T Consensus 86 l~~~V~~vvvhEiahh~G 103 (114)
T 3e11_A 86 VIDEVRKTVVHEIAHHFG 103 (114)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 45678999999999753
No 94
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=47.84 E-value=7.8 Score=36.67 Aligned_cols=26 Identities=19% Similarity=0.194 Sum_probs=20.6
Q ss_pred CCCCCCHHHHHHHHHHhhhhcCcCCC
Q 020589 79 EWDFFPYEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 79 ~~~flp~~~I~~vmlHELaH~~~~~H 104 (324)
...|.|+..=+.|+.|||+|=|.-..
T Consensus 129 g~~f~~~~~~lDVv~HE~tHGVt~~~ 154 (301)
T 1bqb_A 129 GRTFTNLSGANDVVAHEITHGVTQQT 154 (301)
T ss_dssp SSSBSCGGGCHHHHHHHHHHHHHHHT
T ss_pred CcccCCcccccceeeeecccceeccc
Confidence 34689998778999999999775443
No 95
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=45.67 E-value=9.9 Score=33.63 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=17.1
Q ss_pred HHHHHHHHHhhhhcCcCCC
Q 020589 86 EQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H 104 (324)
..|..||+|||.|+.-+.|
T Consensus 137 ~r~~~~~~HElGH~lGl~H 155 (195)
T 2x7m_A 137 ERVVKELTHELGHTFGLGH 155 (195)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhhcCCCC
Confidence 4577999999999999999
No 96
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=43.81 E-value=9.8 Score=36.30 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCc-----eeeeecccCCCCCCceeeecC----CCcEEEEEecCCCCCCCCCCHHHHHH
Q 020589 20 EDDARQILEKVAKQVQPIMRKHKW-----KVRILSEFCPANPSLLGINIG----GGAEVKLRLRRPNREWDFFPYEQILD 90 (324)
Q Consensus 20 ~~~A~~~L~rlA~~v~pIMr~~~w-----~V~~L~Ef~P~~~~llGlN~N----~G~~I~LRLR~~~~~~~flp~~~I~~ 90 (324)
..+|...+..+-+-.+-++.+..+ ++..-.- | |.|.+ .|+.+.+ = +.+...|.|+..-+.
T Consensus 70 avdA~~~~~~t~d~y~~~~gr~sid~~G~~l~~~VH-y-------g~~y~NAfW~g~~m~f--G-DGdg~~f~~~~~slD 138 (316)
T 3dnz_A 70 AVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSVH-Y-------SQGYNNAFWNGSQMVY--G-DGDGQTFIPLSGGID 138 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTTTSSCCCEEEEES-C-------TTTCCCEEECSSCEEE--C-CCCSSSBSCGGGCHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCceEEEEEe-c-------CCCccCceEcCCEEEE--e-CCCCccccccccccc
Confidence 356667777777777777766655 2222111 1 22221 2443222 1 123346899987889
Q ss_pred HHHHhhhhcCcCCC
Q 020589 91 TMLHELCHNEYGPH 104 (324)
Q Consensus 91 vmlHELaH~~~~~H 104 (324)
|+.|||+|=|.-.+
T Consensus 139 Vv~HE~tHgvt~~~ 152 (316)
T 3dnz_A 139 VVAHELTHAVTDYT 152 (316)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred ceeeeecccccccc
Confidence 99999999776554
No 97
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=43.45 E-value=11 Score=33.95 Aligned_cols=22 Identities=23% Similarity=0.129 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhhhcCcCCCch
Q 020589 85 YEQILDTMLHELCHNEYGPHNA 106 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~H~~ 106 (324)
.+.|..+++|||.|+.-.+|-.
T Consensus 140 ~~Rv~k~~~HElGH~lGL~HC~ 161 (210)
T 3lmc_A 140 IDRIVKEGAHEIGHLFGLGHCD 161 (210)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHhcCCCCCC
Confidence 6788999999999999999954
No 98
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.57 E-value=8 Score=28.07 Aligned_cols=15 Identities=27% Similarity=0.835 Sum_probs=13.5
Q ss_pred cccccccccccccCC
Q 020589 261 GQMWQCNMCTLLNQR 275 (324)
Q Consensus 261 ~~~W~c~~cTl~N~~ 275 (324)
...|+|..|-..|++
T Consensus 29 ~GsWeC~~C~V~N~a 43 (57)
T 2ebv_A 29 IGSWECSVCCVSNNA 43 (57)
T ss_dssp SSSCCCSSSCCCCCS
T ss_pred CCeeeCCeeEccCcc
Confidence 478999999999987
No 99
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=40.04 E-value=10 Score=38.72 Aligned_cols=17 Identities=35% Similarity=0.524 Sum_probs=15.0
Q ss_pred HHHHHHHHhhhhcCcCC
Q 020589 87 QILDTMLHELCHNEYGP 103 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~ 103 (324)
.+..|++|||||.++||
T Consensus 294 ~~~~viaHElAHqWfGn 310 (632)
T 2xq0_A 294 SNIDVIAHELAHSWSGN 310 (632)
T ss_dssp CSTHHHHHHHHHTTBTT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 35689999999999997
No 100
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=39.94 E-value=10 Score=38.38 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=15.1
Q ss_pred HHHHHHHHhhhhcCcCC
Q 020589 87 QILDTMLHELCHNEYGP 103 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~ 103 (324)
.+..|++|||||.++||
T Consensus 293 ~~~~viaHElaHqWfGn 309 (605)
T 3cia_A 293 SLVNLIAHELAHSWSGN 309 (605)
T ss_dssp CSTHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 45689999999999997
No 101
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=38.65 E-value=6.6 Score=41.68 Aligned_cols=34 Identities=26% Similarity=0.732 Sum_probs=23.8
Q ss_pred ccccccc-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 263 MWQCNMC-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 263 ~W~c~~c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
---|..| +|+||==+-......|.|.+|...|+.
T Consensus 112 pvRC~~CrayiNPf~~~~~~g~~W~C~~C~~~N~~ 146 (810)
T 1pcx_A 112 IVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDV 146 (810)
T ss_dssp CCBCTTTCCBCCTTCEEETTTTEEECTTTCCEEEC
T ss_pred CCccCCccCEecCceEEeCCCCEEEccCCCCcCCC
Confidence 4568888 899986221123457999999998863
No 102
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=38.17 E-value=16 Score=38.85 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=26.2
Q ss_pred ccccc---ccccccccCC---C--CCCCCCCCccccCCCCCCCCCCccccccCC
Q 020589 261 GQMWQ---CNMCTLLNQR---N--KSVGNLKGWSCKFCTLDNSSLSERCLACGE 306 (324)
Q Consensus 261 ~~~W~---c~~cTl~N~~---p--k~~~~~~~W~C~~CT~~N~~~~~~C~~Cg~ 306 (324)
.+.|+ |+.|.+++.. + +. ..+..|.|..|.... ..|.|-.||+
T Consensus 185 ~~~w~~~~~~~c~h~~~~~~~~~~~~-~~~~~~~C~~c~~~~--~lw~CL~Cg~ 235 (854)
T 3ihp_A 185 VQAWDGEVRQVSKHAFSLKQLDNPAR-IPPCGWKCSKCDMRE--NLWLNLTDGS 235 (854)
T ss_dssp -------CCCBCTTTTTCCCCSSCCC-CCSSCCCCSSSCCCS--SEEEETTTCC
T ss_pred HHhhcCccCCCCcCcccccccccccc-CCCCCCcCcCcCCcC--ceEEEecCCC
Confidence 45688 8899876432 1 11 233569999998744 7788998884
No 103
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=36.22 E-value=7.4 Score=42.06 Aligned_cols=34 Identities=26% Similarity=0.732 Sum_probs=23.7
Q ss_pred ccccccc-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 263 MWQCNMC-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 263 ~W~c~~c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
---|..| +|+||==+-......|.|.+|...|+.
T Consensus 228 pvRC~rCrAYiNPf~~~~~~g~~W~CnfC~~~N~~ 262 (926)
T 1m2v_B 228 IVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDV 262 (926)
T ss_dssp CCBCSSSCCBCCTTCEEETTTTEEECTTTCCEEEC
T ss_pred CCccCCccCEecCceEEeCCCCEEEccCCCCCCCC
Confidence 4668888 899986221123457999999998863
No 104
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=35.75 E-value=17 Score=37.14 Aligned_cols=19 Identities=26% Similarity=0.286 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhhhhcCcCC
Q 020589 85 YEQILDTMLHELCHNEYGP 103 (324)
Q Consensus 85 ~~~I~~vmlHELaH~~~~~ 103 (324)
+..++.++.||++|.+.++
T Consensus 264 ~~~~~~liaHE~~H~W~g~ 282 (597)
T 4fgm_A 264 YQTFLSLCCHEYFHSWNIK 282 (597)
T ss_dssp HHHHHHHHHHHHHHTTBTT
T ss_pred hhchhhhHhhhhheeeccc
Confidence 5678999999999999985
No 105
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=34.93 E-value=11 Score=33.33 Aligned_cols=25 Identities=16% Similarity=0.481 Sum_probs=18.6
Q ss_pred ccccccccccccCCCCCCCCCCCccccCCCC
Q 020589 262 QMWQCNMCTLLNQRNKSVGNLKGWSCKFCTL 292 (324)
Q Consensus 262 ~~W~c~~cTl~N~~pk~~~~~~~W~C~~CT~ 292 (324)
..|.|..|-|+-.. ...|.|++|.-
T Consensus 170 ~~~~C~~CG~i~~g------~~p~~CP~C~~ 194 (202)
T 1yuz_A 170 KFHLCPICGYIHKG------EDFEKCPICFR 194 (202)
T ss_dssp CEEECSSSCCEEES------SCCSBCTTTCC
T ss_pred cEEEECCCCCEEcC------cCCCCCCCCCC
Confidence 58999999776432 12399999985
No 106
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=34.73 E-value=12 Score=39.27 Aligned_cols=35 Identities=26% Similarity=0.468 Sum_probs=23.5
Q ss_pred cccccc--c-ccccCCCCCCCCCCCccccCCCCCCCCC
Q 020589 263 MWQCNM--C-TLLNQRNKSVGNLKGWSCKFCTLDNSSL 297 (324)
Q Consensus 263 ~W~c~~--c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~~ 297 (324)
---|.. | +|+||==+-......|.|.+|...|+..
T Consensus 53 pvRC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N~~P 90 (768)
T 1m2o_A 53 PVVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLP 90 (768)
T ss_dssp CCBCCSTTTCCBCCTTSCEETTTTEECCTTTCCCCBCC
T ss_pred CCccCCCCCCeEECCceEEeCCCCEEEcccCCCCCCCC
Confidence 456877 8 7899862111234579999999888733
No 107
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=34.39 E-value=20 Score=30.56 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=14.5
Q ss_pred CCCCCCccccccCCcccC
Q 020589 293 DNSSLSERCLACGEWRYS 310 (324)
Q Consensus 293 ~N~~~~~~C~~Cg~~r~~ 310 (324)
++-.-+++|.+||..++-
T Consensus 120 ~~r~~~l~C~ACGa~~~V 137 (148)
T 2d74_B 120 RDRFHFLKCEACGAETPI 137 (148)
T ss_dssp SSSSBCCCCSSSCCCCCC
T ss_pred eCCEEEEEecCCCCCccc
Confidence 456778999999998874
No 108
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=34.32 E-value=7 Score=25.56 Aligned_cols=24 Identities=29% Similarity=0.684 Sum_probs=17.5
Q ss_pred cccCCCC-------CCCCCCccccccCCccc
Q 020589 286 SCKFCTL-------DNSSLSERCLACGEWRY 309 (324)
Q Consensus 286 ~C~~CT~-------~N~~~~~~C~~Cg~~r~ 309 (324)
.|+.|.. ++..-+++|.+||..++
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~~~~ 32 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGAIRP 32 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTEEEE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCCccc
Confidence 3666653 35667899999998775
No 109
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=32.10 E-value=18 Score=30.45 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=14.0
Q ss_pred CccccCCCC-------CCCCCCccccccCCcccC
Q 020589 284 GWSCKFCTL-------DNSSLSERCLACGEWRYS 310 (324)
Q Consensus 284 ~W~C~~CT~-------~N~~~~~~C~~Cg~~r~~ 310 (324)
.-.|+.|.. +|-.-+++|.|||..++-
T Consensus 103 yVlC~~C~sPdT~l~k~~r~~~l~C~ACGa~~~V 136 (139)
T 3cw2_K 103 YVECSTCKSLDTILKKEKKSWYIVCLACGAQTPV 136 (139)
T ss_dssp CSSCCSSSSSCCCSCSSCSTTTSSCCC-------
T ss_pred eeECCCCCCcCcEEEEeCCeEEEEecCCCCCCcc
Confidence 456666642 456778999999998863
No 110
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=31.15 E-value=7.7 Score=40.91 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=21.0
Q ss_pred cccccc-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 264 WQCNMC-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 264 W~c~~c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
--|..| +|+||==+-......|.|.+|...|..
T Consensus 95 vRC~rCrayiNPf~~f~~~g~~w~Cn~C~~~N~~ 128 (766)
T 3eh2_A 95 LRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDV 128 (766)
T ss_dssp CBCTTTCCBCCTTCEEEGGGTEEECTTTCCEEEC
T ss_pred CccCCCCCEeCCceEEecCCCEEEeccccccCCC
Confidence 567777 788875111122346888888887763
No 111
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=31.07 E-value=14 Score=35.28 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhhhcCc
Q 020589 86 EQILDTMLHELCHNEY 101 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~ 101 (324)
..-..||||||+|+..
T Consensus 285 ~s~a~tllHE~tH~~~ 300 (343)
T 2x3c_A 285 DSRAGTIVHQLSHFNV 300 (343)
T ss_dssp TCHHHHHHHHHHHSTT
T ss_pred CccchhHhhhhhcccc
Confidence 4678999999999853
No 112
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=30.92 E-value=7.9 Score=40.89 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=22.5
Q ss_pred ccccccc-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 263 MWQCNMC-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 263 ~W~c~~c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
---|..| +|+||==+-......|.|.+|...|..
T Consensus 98 pvRC~rCrayiNPf~~f~~~g~~w~Cn~C~~~N~~ 132 (770)
T 3efo_B 98 PVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDV 132 (770)
T ss_dssp SCBCTTTCCBSCTTCEEEGGGTEEECTTTCCEEEC
T ss_pred CCccCCCCCCcCCceEEecCCCEEEeccccccCCC
Confidence 3578888 888875111122357999999988774
No 113
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=30.69 E-value=17 Score=34.97 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=18.2
Q ss_pred CCCCHHHHHHHHHHhhhhcCcCCC
Q 020589 81 DFFPYEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 81 ~flp~~~I~~vmlHELaH~~~~~H 104 (324)
.|.++..=+.|+.|||+|=|.-..
T Consensus 149 ~f~~~~~~lDVv~HEltHGVt~~~ 172 (341)
T 2vqx_A 149 IFNRFTIAIDVVGHALAHGVTESE 172 (341)
T ss_dssp SBCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ccCCcccchhhhhhhcccceeccc
Confidence 466776667999999999775543
No 114
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=29.07 E-value=18 Score=30.42 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=14.3
Q ss_pred CCCCCCccccccCCcccC
Q 020589 293 DNSSLSERCLACGEWRYS 310 (324)
Q Consensus 293 ~N~~~~~~C~~Cg~~r~~ 310 (324)
++-.-+++|.|||..++-
T Consensus 118 ~~r~~~l~C~ACGa~~~V 135 (138)
T 1nee_A 118 EGRISLLKCEACGAKAPL 135 (138)
T ss_dssp ETTTTEEECSTTSCCCCS
T ss_pred cCCeEEEEccCCCCCccc
Confidence 456678999999998864
No 115
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=28.76 E-value=39 Score=23.91 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=28.0
Q ss_pred CCCCccccCCCCC---CCCCCccccccCCcccC--CCCCCCC
Q 020589 281 NLKGWSCKFCTLD---NSSLSERCLACGEWRYS--NGPPIST 317 (324)
Q Consensus 281 ~~~~W~C~~CT~~---N~~~~~~C~~Cg~~r~~--~~~~~~~ 317 (324)
+.....|.+|... +....+.|+.|...-.. ++||+..
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~ 44 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDS 44 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccc
Confidence 3456899999864 45789999999987544 7888753
No 116
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=27.99 E-value=12 Score=39.29 Aligned_cols=34 Identities=29% Similarity=0.555 Sum_probs=22.7
Q ss_pred cccccc--c-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 263 MWQCNM--C-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 263 ~W~c~~--c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
---|.. | +|+||==+-......|.|.+|...|+.
T Consensus 62 pvRC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N~~ 98 (769)
T 2nut_A 62 PVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQF 98 (769)
T ss_dssp CCBCSSTTCCCBCCTTSEEETTTTEEECSSSCCEEEC
T ss_pred CCcCCCCCCCeEECCceEEeCCCCEEEccCCCCCCCC
Confidence 456777 8 788886211123457999999988863
No 117
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=27.92 E-value=22 Score=29.35 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..|++|||-|.+--.|...
T Consensus 107 ~~~~v~~HEiGHaLGL~H~~~ 127 (160)
T 2jsd_A 107 NLFTVAAHEFGHALGLAHSTD 127 (160)
T ss_dssp EHHHHHHHHHHHHHTCCCCCC
T ss_pred hhHHHHHHHhHhhhcCCCCCC
Confidence 478999999999998888753
No 118
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=27.72 E-value=26 Score=29.47 Aligned_cols=20 Identities=25% Similarity=0.245 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhcCcCCCch
Q 020589 87 QILDTMLHELCHNEYGPHNA 106 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~ 106 (324)
.+..|++|||-|..--.|+.
T Consensus 110 ~~~~v~~HEiGHaLGL~H~~ 129 (168)
T 1cge_A 110 NLHRVAAHELGHSLGLSHST 129 (168)
T ss_dssp BHHHHHHHHHHHHTTCCCCS
T ss_pred chhhhhhhHhHhhhcCCCCC
Confidence 46899999999999989985
No 119
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=27.68 E-value=14 Score=38.99 Aligned_cols=32 Identities=25% Similarity=0.639 Sum_probs=22.1
Q ss_pred cccccc-ccccCCCCCCCCCCCccccCCCCCCCC
Q 020589 264 WQCNMC-TLLNQRNKSVGNLKGWSCKFCTLDNSS 296 (324)
Q Consensus 264 W~c~~c-Tl~N~~pk~~~~~~~W~C~~CT~~N~~ 296 (324)
--|..| +|+||==+-.. ...|.|.+|...|..
T Consensus 86 ~RC~rCrayiNPf~~f~~-~~~w~Cn~C~~~N~~ 118 (751)
T 3eh1_A 86 VRCRSCRTYINPFVSFID-QRRWKCNLCYRVNDV 118 (751)
T ss_dssp CBCTTTCCBCCTTCEESS-SSEEECTTTCCEEEC
T ss_pred CcccCccCEeCCceEEec-CCEEEcccccCCCCC
Confidence 567777 78998622112 267999999988864
No 120
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=26.74 E-value=18 Score=30.14 Aligned_cols=11 Identities=27% Similarity=0.601 Sum_probs=8.2
Q ss_pred CccccccCCcc
Q 020589 298 SERCLACGEWR 308 (324)
Q Consensus 298 ~~~C~~Cg~~r 308 (324)
+..|..||++.
T Consensus 107 ~~~CP~Cgs~~ 117 (139)
T 3a43_A 107 FLACPKCGSHD 117 (139)
T ss_dssp GCSCSSSSCCC
T ss_pred CCcCccccCCc
Confidence 57788888765
No 121
>2ida_A Hypothetical protein; zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: g.44.1.5
Probab=26.39 E-value=15 Score=29.47 Aligned_cols=24 Identities=21% Similarity=0.448 Sum_probs=19.2
Q ss_pred CccccCCCC--CCCCCCccccccCCc
Q 020589 284 GWSCKFCTL--DNSSLSERCLACGEW 307 (324)
Q Consensus 284 ~W~C~~CT~--~N~~~~~~C~~Cg~~ 307 (324)
.|.|..|-. .||..+|.|-.||+-
T Consensus 18 ~~~C~~C~~~~~~Wv~LwlCL~CG~V 43 (102)
T 2ida_A 18 ALGCEECLKIGSPWVHLRICRTCGHV 43 (102)
T ss_dssp SSSCHHHHTTTCCCSCBEEESSSCCC
T ss_pred CCcCccccccCCcchheeeeeEcCCC
Confidence 788998876 477888888888864
No 122
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.07 E-value=59 Score=22.43 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=24.3
Q ss_pred CCCCccccCCCCCCCCCCccccccCCcccC--CCCCCCC
Q 020589 281 NLKGWSCKFCTLDNSSLSERCLACGEWRYS--NGPPIST 317 (324)
Q Consensus 281 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~--~~~~~~~ 317 (324)
....+.|.+|... ...+.|+.|...-.. .+||+..
T Consensus 6 ~~~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~ppl~~ 42 (56)
T 2yql_A 6 SGHEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLKT 42 (56)
T ss_dssp CSSCCSCSSSCCS--SCCEECSSSSCEECSSSSSSCCCS
T ss_pred CCCCCCCccCCCC--CeEEEcCCCCcceECccCCCCcCC
Confidence 3456889999865 378889998866444 5666653
No 123
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=24.92 E-value=32 Score=28.71 Aligned_cols=21 Identities=14% Similarity=0.093 Sum_probs=18.4
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..|++|||-|..--.|+..
T Consensus 110 ~~~~va~HEiGHaLGL~Hs~~ 130 (159)
T 2ovx_A 110 SLFLVAAHQFGHALGLDHSSV 130 (159)
T ss_dssp EHHHHHHHHHHHHTTCCCCSC
T ss_pred chhhhhhhhhhhhhcCCCCCC
Confidence 478999999999998899864
No 124
>1ylx_A Hypothetical protein APC35702; dimer, structural genomics, PSI, protein structure initiative; 1.60A {Geobacillus stearothermophilus} SCOP: d.82.5.1
Probab=23.39 E-value=1e+02 Score=24.74 Aligned_cols=49 Identities=18% Similarity=0.372 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhhcCc-eeeeecccCCCCCCceeeecCC-CcEEEEEe
Q 020589 25 QILEKVAKQVQPIMRKHKW-KVRILSEFCPANPSLLGINIGG-GAEVKLRL 73 (324)
Q Consensus 25 ~~L~rlA~~v~pIMr~~~w-~V~~L~Ef~P~~~~llGlN~N~-G~~I~LRL 73 (324)
.+|..+-.-+.|+|.++|. .|++.+|==-.|.-.+|+.||+ +..|.|..
T Consensus 11 ~ii~el~~~~~~~l~~Ygld~vgifEEeGegn~YY~GYTVkKdd~~~~ih~ 61 (103)
T 1ylx_A 11 VVIEEFIDTLEPMMEAYGLDQVGIFEEHGEGNRYYVGYTINKDDEMITIHM 61 (103)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCEEEEEEECSTTEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCcceeeeeecCCCceEEEEEEEccCCeEEEEec
Confidence 4677777789999999998 5899998766788899999986 55566554
No 125
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=23.28 E-value=27 Score=32.91 Aligned_cols=24 Identities=29% Similarity=0.398 Sum_probs=18.1
Q ss_pred CCCCCHHHHHHHHHHhhhhcCcCCC
Q 020589 80 WDFFPYEQILDTMLHELCHNEYGPH 104 (324)
Q Consensus 80 ~~flp~~~I~~vmlHELaH~~~~~H 104 (324)
..|.|+. =+.|+.|||+|=|.-..
T Consensus 127 ~~~~p~~-~lDVv~HE~tHGVt~~~ 150 (301)
T 1u4g_A 127 TMFYPLV-SLDVAAHEVSHGFTEQN 150 (301)
T ss_dssp SSBSCSC-CHHHHHHHHHHHHHHTT
T ss_pred ccccccc-ccceeeeccccceeccc
Confidence 3577874 57899999999775554
No 126
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=22.97 E-value=41 Score=26.81 Aligned_cols=25 Identities=24% Similarity=0.492 Sum_probs=15.7
Q ss_pred CccccCCCC--CCCCCCc-cccccCCcc
Q 020589 284 GWSCKFCTL--DNSSLSE-RCLACGEWR 308 (324)
Q Consensus 284 ~W~C~~CT~--~N~~~~~-~C~~Cg~~r 308 (324)
.|.|.-|.+ +-..... .|..||++.
T Consensus 73 ~~~C~~CG~~~e~~~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 73 ELECKDCSHVFKPNALDYGVCEKCHSKN 100 (119)
T ss_dssp EEECSSSSCEECSCCSTTCCCSSSSSCC
T ss_pred eEEcCCCCCEEeCCCCCCCcCccccCCC
Confidence 577777775 2223345 788888764
No 127
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=22.80 E-value=31 Score=28.86 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..|++|||-|..--.|+..
T Consensus 114 ~~~~v~~HEiGHaLGL~H~~~ 134 (167)
T 2xs4_A 114 DLITVAAHEIGHLLGIEHSNV 134 (167)
T ss_dssp EHHHHHHHHHHHHHTBCCCSC
T ss_pred chhhhHHHHHHHhhcCCCCCC
Confidence 678999999999998888764
No 128
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=22.45 E-value=26 Score=30.61 Aligned_cols=18 Identities=22% Similarity=0.542 Sum_probs=14.4
Q ss_pred CCCCCCccccccCCcccC
Q 020589 293 DNSSLSERCLACGEWRYS 310 (324)
Q Consensus 293 ~N~~~~~~C~~Cg~~r~~ 310 (324)
++..-++.|.|||..++-
T Consensus 114 ~~r~~~l~C~ACGa~~~V 131 (170)
T 2g2k_A 114 KKQTIGNSCKACGYRGML 131 (170)
T ss_dssp TTTEEEEEETTTCCCCCS
T ss_pred CCCEEEEEccccCCcccc
Confidence 355667899999999886
No 129
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=22.17 E-value=32 Score=29.03 Aligned_cols=21 Identities=24% Similarity=0.214 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..|++|||-|..--.|+..
T Consensus 112 ~~~~v~~HEiGHaLGL~H~~~ 132 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLGLFHSAN 132 (173)
T ss_dssp EHHHHHHHHHHHHHTBCCCSC
T ss_pred hhhhhHHHHHHHhhcCCCCCC
Confidence 468999999999998888764
No 130
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=22.02 E-value=39 Score=28.23 Aligned_cols=22 Identities=23% Similarity=0.235 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhcCcCCCchh
Q 020589 86 EQILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~~ 107 (324)
..+..|++|||-|..--.|+..
T Consensus 111 ~~~~~v~~HEiGHaLGL~H~~~ 132 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVLGLQHTTA 132 (165)
T ss_dssp EEHHHHHHHHHHHHTTCCCCSC
T ss_pred chhhhhHHHHhHhhhCCCCCCC
Confidence 3578999999999998888864
No 131
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=21.97 E-value=73 Score=22.76 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=21.0
Q ss_pred CCCccccCCCCCCCCCCccccccCCcccC--CCCCCCC
Q 020589 282 LKGWSCKFCTLDNSSLSERCLACGEWRYS--NGPPIST 317 (324)
Q Consensus 282 ~~~W~C~~CT~~N~~~~~~C~~Cg~~r~~--~~~~~~~ 317 (324)
...|.|.+|.-. ...+.|+.|...-.. .+||+..
T Consensus 6 ~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ppl~~ 41 (66)
T 1xwh_A 6 KNEDECAVCRDG--GELICCDGCPRAFHLACLSPPLRE 41 (66)
T ss_dssp SCCCSBSSSSCC--SSCEECSSCCCEECTTTSSSCCSS
T ss_pred CCCCCCccCCCC--CCEEEcCCCChhhcccccCCCcCc
Confidence 346778888753 367788877765433 5565543
No 132
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=21.90 E-value=34 Score=28.72 Aligned_cols=21 Identities=24% Similarity=0.254 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhhcCcCCCch
Q 020589 86 EQILDTMLHELCHNEYGPHNA 106 (324)
Q Consensus 86 ~~I~~vmlHELaH~~~~~H~~ 106 (324)
..+..|++|||-|..--.|+.
T Consensus 115 ~~~~~~~~he~gh~lgl~h~~ 135 (169)
T 1rm8_A 115 NDLFLVAVHELGHALGLEHSN 135 (169)
T ss_dssp EEHHHHHHHHHHHHHTCCCCS
T ss_pred ceeeeehhhhhhhhcCCCCCC
Confidence 457899999999999889974
No 133
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=21.29 E-value=42 Score=28.04 Aligned_cols=21 Identities=29% Similarity=0.355 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhhcCcCCCchh
Q 020589 87 QILDTMLHELCHNEYGPHNAD 107 (324)
Q Consensus 87 ~I~~vmlHELaH~~~~~H~~~ 107 (324)
.+..|++|||-|..--.|+..
T Consensus 107 ~~~~~~~HE~GH~lGl~H~~~ 127 (159)
T 1y93_A 107 NLFLTAVHEIGHSLGLGHSSD 127 (159)
T ss_dssp EHHHHHHHHHHHHTTCCCCSC
T ss_pred hhhhhhhhhhhhhhcCCCCCC
Confidence 478999999999998888764
No 134
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.20 E-value=23 Score=30.47 Aligned_cols=17 Identities=24% Similarity=0.563 Sum_probs=13.6
Q ss_pred CCCCCccccccCCcccC
Q 020589 294 NSSLSERCLACGEWRYS 310 (324)
Q Consensus 294 N~~~~~~C~~Cg~~r~~ 310 (324)
+..-++.|.|||..++-
T Consensus 122 ~r~~~l~C~ACGa~~~V 138 (157)
T 2e9h_A 122 KQTIGNSCKACGYRGML 138 (157)
T ss_dssp TTEEEEECSSSCCEEEC
T ss_pred CCEEEEEccCCCCCCcc
Confidence 45667899999998875
No 135
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=21.10 E-value=32 Score=32.65 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecC----CCcEEEEEecCCCCCCCCCCHHHHHHHHHHhh
Q 020589 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIG----GGAEVKLRLRRPNREWDFFPYEQILDTMLHEL 96 (324)
Q Consensus 21 ~~A~~~L~rlA~~v~pIMr~~~w~V~~L~Ef~P~~~~llGlN~N----~G~~I~LRLR~~~~~~~flp~~~I~~vmlHEL 96 (324)
-+|.-....+-+..+-++.+......+.. .--.|.|.+ .|+.+.+ -. .+..|.|+. =+.|+.|||
T Consensus 75 ~DAhy~a~~t~d~y~~~~gr~~id~~l~~------~VHyg~~y~NAfWdg~~m~f--GD--G~~~~~~~~-slDVv~HE~ 143 (306)
T 3nqx_A 75 NDAHFFGNVIFNMYNDWLGTAPLSFQLQM------RVHYSSNYENAFWDGSAMTF--GD--GQNTFYPLV-SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSSCEEE------EEEESSSCCCEEECSSCEEE--EC--CCSSBSCSC-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCceEE------EEecCCCccCccccCCEEEE--eC--CCccccccc-ccchhhhhh
Confidence 44555555555555666666555311110 000133322 2554333 22 233578875 578999999
Q ss_pred hhcCcCCC
Q 020589 97 CHNEYGPH 104 (324)
Q Consensus 97 aH~~~~~H 104 (324)
+|=+.-.+
T Consensus 144 tHGvt~~~ 151 (306)
T 3nqx_A 144 SHGFTEQN 151 (306)
T ss_dssp HHHHHHTT
T ss_pred ccccccCC
Confidence 99887655
No 136
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=20.72 E-value=68 Score=22.40 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=23.9
Q ss_pred CCccccCCCCCCCCCCccccccCCcccC--CCCCCCC
Q 020589 283 KGWSCKFCTLDNSSLSERCLACGEWRYS--NGPPIST 317 (324)
Q Consensus 283 ~~W~C~~CT~~N~~~~~~C~~Cg~~r~~--~~~~~~~ 317 (324)
..+.|.+|.-. ...+.|+.|...-.. .+||+..
T Consensus 4 ~~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~~ 38 (60)
T 2puy_A 4 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLKT 38 (60)
T ss_dssp CCSSCTTTCCC--SSCEECSSSSCEECGGGSSSCCSS
T ss_pred CCCCCcCCCCC--CcEEEcCCCCcCEECCcCCCCcCC
Confidence 45789999864 478999999866444 6677654
Done!