BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020590
(324 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356515866|ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817904 [Glycine max]
Length = 322
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/314 (67%), Positives = 251/314 (79%), Gaps = 1/314 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +SK+QLLARLK+LQ+ FSQYEHP V+TV+AQA+YVG++GGGLSKNLFLKDKK R YIV
Sbjct: 1 MGFSKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVD+KVLSQRLGLGKGGLRMAPEE + E+L+VPLG VTPFALVNESARDV+LLL
Sbjct: 61 SALAGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+Q+ CFFHPLSNDMSISLN DLDKFLKSIGR+P+YVDLE NP VGKDQPPDLAA
Sbjct: 121 DQGFKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAA 180
Query: 181 FVPSGSTVLPDLPDPASAVQ-SAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVN 239
VPSGS VLPD P S+ Q +HV+ +N + K +KP+ +N K AK VN
Sbjct: 181 LVPSGSIVLPDQPQKQSSSQVPKDANHVSVDNGANTVSAKVVKPSSGGKNTKGTPAKNVN 240
Query: 240 PSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLAT 299
S SF DA +FVEEIL + S LLSE K+ NI G++LG ++++L+K E K+LA
Sbjct: 241 SSGSFADAGQFVEEILQKTSQLLLSEVKDENIKLHGEQLGTVLSDKLQKNLNAEFKSLAM 300
Query: 300 IFKNTAYTQGFHAG 313
IFKNTAYT+GFHAG
Sbjct: 301 IFKNTAYTEGFHAG 314
>gi|359492751|ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Vitis vinifera]
gi|302141840|emb|CBI19043.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/313 (65%), Positives = 245/313 (78%), Gaps = 1/313 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +SKDQLLARL++LQI+F++YEHPAV+TVEAQ KYVG++GGGLSKNLFLKDKKHRFYIV
Sbjct: 1 MGHSKDQLLARLQELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SAL DTKVD+KVLSQRLGLGKGGLRMAPEE + EIL+V LG VTPFALVNESAR V+L L
Sbjct: 61 SALKDTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK ++ CFFHPLSNDMSI++ DLDKFLKSIG+DP+YVDLEANP VGKDQPPDLA
Sbjct: 121 DQGFKTKDFCFFHPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAG 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VPS + VL D P+ S H + +N A K +KP+ +VQ VK+K +V+
Sbjct: 181 LVPSDAIVLQDPPE-KSVSSGPTEKHASVDNKSSVAAAKTVKPSNNVQKVKEKPPISVHQ 239
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
SSFTD FVEEILD+ SA +LSE E I Q G+ LG +++ +RK +LKNLA I
Sbjct: 240 LSSFTDPGHFVEEILDKTSAIVLSEITEDAIKQHGEHLGAVLSDSIRKRLSLDLKNLAII 299
Query: 301 FKNTAYTQGFHAG 313
+KNTAYT+GFHA
Sbjct: 300 YKNTAYTEGFHAA 312
>gi|255545452|ref|XP_002513786.1| conserved hypothetical protein [Ricinus communis]
gi|223546872|gb|EEF48369.1| conserved hypothetical protein [Ricinus communis]
Length = 321
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/313 (66%), Positives = 246/313 (78%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y KDQLLARLK+LQI+F QYEHP V+TVE QAKYVG+ GGGLSKNLFLKDKK RFYIV
Sbjct: 1 MGYGKDQLLARLKELQIDFVQYEHPTVLTVEEQAKYVGDKGGGLSKNLFLKDKKSRFYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SAL DTKVDMKVLSQRLGLGKGG+RMAPEE + EIL+VPLG VTPFA++NESAR V+LLL
Sbjct: 61 SALEDTKVDMKVLSQRLGLGKGGIRMAPEEALAEILQVPLGCVTPFAVMNESARHVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
DKGF AQE CFFHPLSN+MSISL+ DLDKFLKSIGR+P+YVDLEANP VGKDQPPDLA
Sbjct: 121 DKGFIAQEYCFFHPLSNNMSISLHARDLDKFLKSIGREPSYVDLEANPPVGKDQPPDLAI 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
FVPS ST+L D P + +Q + ++A+ AA K K V+NV+ +SA +
Sbjct: 181 FVPSDSTILSDPPQKEAPLQGHNKNPISADKKSIAAAVKTTKLPSTVKNVQGESAVPAHQ 240
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
S F+DA+ VEEIL++ SA LLSE KE +I + G+ LG +A+ +RK +LK+LA +
Sbjct: 241 RSVFSDADLLVEEILNKTSALLLSEIKEDSIKEHGEHLGTVVADSIRKRLSSDLKSLAIM 300
Query: 301 FKNTAYTQGFHAG 313
FKNTAY QGF+AG
Sbjct: 301 FKNTAYAQGFYAG 313
>gi|356552652|ref|XP_003544677.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Glycine max]
Length = 320
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/313 (64%), Positives = 242/313 (77%), Gaps = 1/313 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +SK+QLLARLK+L I FSQYEHPA++TVE KYVG++GGG+SKNLFLKDKK RFY+V
Sbjct: 1 MGFSKEQLLARLKELLINFSQYEHPAILTVEEGEKYVGHLGGGVSKNLFLKDKKQRFYLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SAL DTKVD+KVLSQRLGLGKGGLRM P E + EIL+V LG VTPFA+VNESARDV+LLL
Sbjct: 61 SALKDTKVDIKVLSQRLGLGKGGLRMVPSEALGEILQVSLGCVTPFAVVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK QE CFFHPLSNDM+IS+N+NDLDKFLKSIGRDP+YVD EANP VGKDQPPDLAA
Sbjct: 121 DQGFKTQEFCFFHPLSNDMTISINSNDLDKFLKSIGRDPSYVDFEANPPVGKDQPPDLAA 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VPSG+ LPD P+ + Q G+HV+ + K + K +K +N K+K+ +
Sbjct: 181 LVPSGTINLPDQPEKQPSSQPTEGNHVSV-DEPKIISAKVVKSCVSGKNTKEKAVNKAHS 239
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
S +F D E FVEEIL + S LLSE KE I Q G+ LG +++ LRK +L+NL I
Sbjct: 240 SGNFADVELFVEEILHKTSRLLLSEIKEDTITQHGENLGTVVSDNLRKGLSSDLENLTMI 299
Query: 301 FKNTAYTQGFHAG 313
FKNTAYT+GFHAG
Sbjct: 300 FKNTAYTEGFHAG 312
>gi|449449737|ref|XP_004142621.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Cucumis sativus]
Length = 323
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 248/314 (78%), Gaps = 2/314 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y+++ LL+ L+DLQ++FS+YEHPAV+TVEAQAKYVGN+GGGLSKNLFLKDKK+R+YIVS
Sbjct: 5 VYTREHLLSLLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVS 64
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
ALADTKVD+KVLS RLGLGKGGLRMAPEE + E LKV LG VTPFAL+N++ARDVALLLD
Sbjct: 65 ALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVALLLD 124
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAF 181
+GFK QE CFFHPLSN+ SIS+NT++LDKFL+SIGRDP+YVDLEANP+VGKDQPPDLA
Sbjct: 125 QGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSVGKDQPPDLAGL 184
Query: 182 VPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNPS 241
VPS S+++PD P+ S+ + +H + KA +KP+ V+ KDK V P
Sbjct: 185 VPSVSSLVPDTPEKVSSHPDSNENHGVTDKKSKAVAANTVKPSTTVKVGKDKPTPKVQP- 243
Query: 242 SSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATIF 301
++ + EKFVEEILD+ SA +LS+ E + + G+ LG ++N +++ EL NL+ IF
Sbjct: 244 -TYANVEKFVEEILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLSSELNNLSMIF 302
Query: 302 KNTAYTQGFHAGKA 315
KNTAYT+GFHAG +
Sbjct: 303 KNTAYTEGFHAGSS 316
>gi|449524730|ref|XP_004169374.1| PREDICTED: proline--tRNA ligase-like [Cucumis sativus]
Length = 323
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 248/314 (78%), Gaps = 2/314 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y+++ LL+ L+DLQ++FS+YEHPAV+TVEAQAKYVGN+GGGLSKNLFLKDKK+R+YIVS
Sbjct: 5 VYTREHLLSLLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVS 64
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
ALADTKVD+KVLS RLGLGKGGLRMAPEE + E LKV LG VTPFAL+N++ARDVALLLD
Sbjct: 65 ALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVALLLD 124
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAF 181
+GFK QE CFFHPLSN+ SIS+NT++LDKFL+SIGRDP+YVDLEANP+VGKDQPPDLA
Sbjct: 125 QGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSVGKDQPPDLAGL 184
Query: 182 VPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNPS 241
VPS S+++PD P+ S+ + +H + KA +KP+ V+ KDK V P
Sbjct: 185 VPSVSSLVPDTPEKVSSRPDSNENHGVTDKKSKAVAANTVKPSTTVKVGKDKPTPKVQP- 243
Query: 242 SSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATIF 301
++ + EKFVEEILD+ SA +LS+ E + + G+ LG ++N +++ EL NL+ IF
Sbjct: 244 -TYANVEKFVEEILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLSSELNNLSMIF 302
Query: 302 KNTAYTQGFHAGKA 315
KNTAYT+GFHAG +
Sbjct: 303 KNTAYTEGFHAGSS 316
>gi|217075807|gb|ACJ86263.1| unknown [Medicago truncatula]
Length = 329
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/318 (64%), Positives = 241/318 (75%), Gaps = 7/318 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M SK+QLL +L++LQIEFS+YEHP V+TVEAQAKYVG+ GGLSKNLFLKDKK+RFYIV
Sbjct: 1 MGLSKEQLLHQLQELQIEFSKYEHPVVLTVEAQAKYVGS--GGLSKNLFLKDKKNRFYIV 58
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA+TKVD+KVLSQRLGLGKGGLRMAPEE + E+L+VPLG VTPFA+VNESARDV+LLL
Sbjct: 59 SALAETKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLL 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK QE CFFHPLSNDMSISLN LDKFLKSIGRDP+YVDLEANPAVGKDQPPDLAA
Sbjct: 119 DQGFKTQEHCFFHPLSNDMSISLNVRGLDKFLKSIGRDPSYVDLEANPAVGKDQPPDLAA 178
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSH-----VNANNNCKAATEKAIKPAKDVQNVKDKSA 235
VPS S +LPD P S+ + + V+ + K K +KP+ N K
Sbjct: 179 LVPSSSIILPDQPGKQSSTEVPKNENLVSVAVSVDTKTKTVPAKVVKPSVAGNNSKGTPE 238
Query: 236 KAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELK 295
K V PS SF DA K VEEIL + S LLSE E I G++LG ++++L+K +LK
Sbjct: 239 KTVQPSGSFADAGKLVEEILHKTSKILLSEINEETIKMHGEQLGTALSDKLQKNLTSDLK 298
Query: 296 NLATIFKNTAYTQGFHAG 313
NLA FKNTAYT+GF G
Sbjct: 299 NLAMTFKNTAYTEGFQDG 316
>gi|357461571|ref|XP_003601067.1| hypothetical protein MTR_3g072620 [Medicago truncatula]
gi|355490115|gb|AES71318.1| hypothetical protein MTR_3g072620 [Medicago truncatula]
Length = 378
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/321 (64%), Positives = 242/321 (75%), Gaps = 7/321 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M SK+QLL +L++LQIEFS+YEHP V+TVEAQAKYVG+ GGLSKNLFLKDKK+RFYIV
Sbjct: 50 MGLSKEQLLHQLQELQIEFSKYEHPVVLTVEAQAKYVGS--GGLSKNLFLKDKKNRFYIV 107
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA+TKVD+KVLSQRLGLGKGGLRMAPEE + E+L+VPLG VTPFA+VNESARDV+LLL
Sbjct: 108 SALAETKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLL 167
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK QE CFFHPLSNDMSISLN LDKFLKSIGRDP+YVDLEANPAVGKDQPPDLAA
Sbjct: 168 DQGFKTQEHCFFHPLSNDMSISLNVRGLDKFLKSIGRDPSYVDLEANPAVGKDQPPDLAA 227
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSH-----VNANNNCKAATEKAIKPAKDVQNVKDKSA 235
VPS S +LPD P S+ + + V+ + K K +KP+ N K
Sbjct: 228 LVPSSSIILPDQPGKQSSTEVPKNENLVSVAVSVDTKTKTVPAKVVKPSVAGNNSKGTPE 287
Query: 236 KAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELK 295
K V PS SF DA K VEEIL + S LLSE E I G++LG ++++L+K +LK
Sbjct: 288 KTVQPSGSFADAGKLVEEILHKTSKILLSEINEETIKMHGEQLGTALSDKLQKNLTSDLK 347
Query: 296 NLATIFKNTAYTQGFHAGKAS 316
NLA FKNTAYT+GF G S
Sbjct: 348 NLAMTFKNTAYTEGFQDGLQS 368
>gi|388495642|gb|AFK35887.1| unknown [Medicago truncatula]
Length = 329
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/305 (64%), Positives = 228/305 (74%), Gaps = 7/305 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQR 76
IEFS+YEHP V+TVEAQAKYVG+ GGLSKNLFLKDKK+RFYIVSALA+TKVD+KVLSQR
Sbjct: 17 IEFSKYEHPVVLTVEAQAKYVGS--GGLSKNLFLKDKKNRFYIVSALAETKVDLKVLSQR 74
Query: 77 LGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLS 136
LGLGKGGLRMAPEE + E+L+VPLG VTPFA+VNESARDV+LLLD+GFK QE CFFHPLS
Sbjct: 75 LGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLLDQGFKTQEHCFFHPLS 134
Query: 137 NDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDLPDPA 196
NDMSISLN LDKFLKSIGRDP+YVDLEANPAVGKDQPPDLAA VPS S +LPD P
Sbjct: 135 NDMSISLNVRGLDKFLKSIGRDPSYVDLEANPAVGKDQPPDLAALVPSSSIILPDQPGKQ 194
Query: 197 SAVQSAGGSH-----VNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNPSSSFTDAEKFV 251
S+ + + V+ + K K +KP+ N K K V PS SF DA K V
Sbjct: 195 SSTEVPKNENLVSVAVSVDTKTKTVPAKVVKPSVAGNNSKGTPEKTVQPSGSFADAGKLV 254
Query: 252 EEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATIFKNTAYTQGFH 311
EEIL + S L SE E I G++LG ++++L+K +LKNLA FKNTAYT+GF
Sbjct: 255 EEILHKTSKILFSEINEETIKMHGEQLGTALSDKLQKNLTSDLKNLAMTFKNTAYTEGFQ 314
Query: 312 AGKAS 316
G S
Sbjct: 315 DGLQS 319
>gi|224084860|ref|XP_002307426.1| predicted protein [Populus trichocarpa]
gi|222856875|gb|EEE94422.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 219/271 (80%), Gaps = 5/271 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++K QLLARLK+LQI FSQYEHP V+TVEAQAKYVG+ GGGLSKNLFLKDKK RFYIV
Sbjct: 1 MGFTKQQLLARLKELQINFSQYEHPTVLTVEAQAKYVGDKGGGLSKNLFLKDKKSRFYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALADTKVDMKVLSQRLGLGKGG+RMAPEE + EIL+VPLG VTPFALVNESAR V+LLL
Sbjct: 61 SALADTKVDMKVLSQRLGLGKGGIRMAPEEALGEILQVPLGCVTPFALVNESARHVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
DKGF++QE CFFHPLSNDMSI+LN DLDKFLKSIGRDP+Y+DLEANP VGKDQPPDLA+
Sbjct: 121 DKGFQSQEHCFFHPLSNDMSIALNACDLDKFLKSIGRDPSYIDLEANPTVGKDQPPDLAS 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDV-----QNVKDKSA 235
FVPSGST+ PD PD A+ +Q + + N AAT KA KP + QN KDK
Sbjct: 181 FVPSGSTIQPDQPDKAAPLQDPTENSLPVNKKSVAATGKAAKPHTSMQNSSTQNSKDKPV 240
Query: 236 KAVNPSSSFTDAEKFVEEILDRISAKLLSET 266
V+ S F+D+ FVEEIL++ SA LLSE
Sbjct: 241 NPVHQPSVFSDSGLFVEEILNKTSALLLSEV 271
>gi|147783581|emb|CAN68007.1| hypothetical protein VITISV_014949 [Vitis vinifera]
Length = 610
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/286 (64%), Positives = 221/286 (77%), Gaps = 1/286 (0%)
Query: 13 KDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKV 72
++LQI+F++YEHPAV+TVEAQ KYVG++GGGLSKNLFLKDKKHRFYIVSAL DTKVD+KV
Sbjct: 258 QELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSALKDTKVDLKV 317
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
LSQRLGLGKGGLRMAPEE + EIL+V LG VTPFALVNESAR V+L LD+GFK ++ CFF
Sbjct: 318 LSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQGFKXKDFCFF 377
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDL 192
HPLSNDMSI++ DLDKFLKSIG+DP+YVDLEANP VGKDQPPDLA VPS + VL D
Sbjct: 378 HPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVPSDAIVLQDP 437
Query: 193 PDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNPSSSFTDAEKFVE 252
P+ S H + +N A K +KP+ +VQ VK+K +V+ SSFTD FVE
Sbjct: 438 PE-KSVSSGPTEKHASVDNKSSVAAAKTVKPSNNVQKVKEKPXISVHQLSSFTDPGHFVE 496
Query: 253 EILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLA 298
EILD+ SA +LSE E I Q G+ LG +++ +RK +LKNLA
Sbjct: 497 EILDKTSAIVLSEITEDAIKQHGEHLGAVLSDSIRKRLSLDLKNLA 542
>gi|79319356|ref|NP_001031149.1| YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein
[Arabidopsis thaliana]
gi|332193937|gb|AEE32058.1| YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein
[Arabidopsis thaliana]
Length = 308
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/313 (59%), Positives = 233/313 (74%), Gaps = 13/313 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++KDQLL RL++L+I++S+YEHP V+TVE QAKYV + G LSKNLFLKDKKHR+YIV
Sbjct: 1 MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA+ DTKVDMKVLSQRLGLGKGG+RMAPEE + E+L+V LG VTPFA+VNESARDV+LLL
Sbjct: 61 SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+ FK Q RC FHPLSND+S+SLNT LDKFLKSIGRDP YVDLEANP VGKDQ PDLA
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAV 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VPS S ++P++P+ S+ Q V+A A+ K KPA V++V + SA
Sbjct: 181 CVPSNSVIVPEIPNQTSSTQIPLPKSVSAEVK-PVASAKTSKPACKVKSVAENSA----- 234
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
S++ + EKFV+EILD+ SA LLSE +G E +A LRK EL +L+ +
Sbjct: 235 PSAYKNPEKFVQEILDKTSALLLSEVAKG-------ECVEALAETLRKRLTSELTHLSIM 287
Query: 301 FKNTAYTQGFHAG 313
+KN+AY +GF+AG
Sbjct: 288 YKNSAYAEGFYAG 300
>gi|30693857|ref|NP_175105.2| YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein
[Arabidopsis thaliana]
gi|26451543|dbj|BAC42869.1| unknown protein [Arabidopsis thaliana]
gi|28973135|gb|AAO63892.1| unknown protein [Arabidopsis thaliana]
gi|332193936|gb|AEE32057.1| YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein
[Arabidopsis thaliana]
Length = 307
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/313 (59%), Positives = 232/313 (74%), Gaps = 14/313 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++KDQLL RL++L+I++S+YEHP V+TVE QAKYV + G LSKNLFLKDKKHR+YIV
Sbjct: 1 MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA+ DTKVDMKVLSQRLGLGKGG+RMAPEE + E+L+V LG VTPFA+VNESARDV+LLL
Sbjct: 61 SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+ FK Q RC FHPLSND+S+SLNT LDKFLKSIGRDP YVDLEANP VGKDQ PDLA
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAV 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VPS S ++P++P+ S+ Q V+A A+ K KPA V++V + SA
Sbjct: 181 CVPSNSVIVPEIPNQTSSTQIPLPKSVSAEVK-PVASAKTSKPACKVKSVAENSA----- 234
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
S++ + EKFV+EILD+ SA LLSE K E +A LRK EL +L+ +
Sbjct: 235 PSAYKNPEKFVQEILDKTSALLLSEAK--------GECVEALAETLRKRLTSELTHLSIM 286
Query: 301 FKNTAYTQGFHAG 313
+KN+AY +GF+AG
Sbjct: 287 YKNSAYAEGFYAG 299
>gi|110742857|dbj|BAE99327.1| hypothetical protein [Arabidopsis thaliana]
Length = 307
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/313 (59%), Positives = 231/313 (73%), Gaps = 14/313 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++KDQLL RL++L+I++S+YEHP V+TVE QAKYV + G LSKNLFLKDKKHR+YIV
Sbjct: 1 MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA+ DTKVDMKVLSQRLGLGKGG+RMAPEE + E+L+V LG VTPFA+VNESARDV+LLL
Sbjct: 61 SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+ FK Q RC FHPLSND+S+SLNT LDKFLKSIGRDP YVDLEANP VGKDQ PDLA
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAV 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VPS S ++P++P+ S+ Q V+ A+ K KPA V++V + SA
Sbjct: 181 CVPSNSVIVPEIPNQTSSTQIPLPKSVSVEVK-PVASAKTSKPACKVKSVAENSA----- 234
Query: 241 SSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATI 300
S++ + EKFV+EILD+ SA LLSE K E +A LRK EL +L+ +
Sbjct: 235 PSAYKNPEKFVQEILDKTSALLLSEAK--------GECVEALAETLRKRLTSELTHLSIM 286
Query: 301 FKNTAYTQGFHAG 313
+KN+AY +GF+AG
Sbjct: 287 YKNSAYAEGFYAG 299
>gi|255635195|gb|ACU17953.1| unknown [Glycine max]
Length = 230
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 191/225 (84%), Gaps = 1/225 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +SK+QLLARLK+LQ+ FSQYEHP V+TV+AQA+YVG++GGGLSKNLFLKDKK R YIV
Sbjct: 1 MGFSKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKV++KVLSQRLGLGKGGLRMAPEE + E+L+VPLG VTPFALVNESARDV+LLL
Sbjct: 61 SALAGTKVELKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+Q+ CFFHPLSNDMSISLN DLDKFLKSIGR+P+YVDLE NP VGKDQPPDLAA
Sbjct: 121 DQGFKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAA 180
Query: 181 FVPSGSTVLPDLPDPASAVQ-SAGGSHVNANNNCKAATEKAIKPA 224
VPSGS VLPD P S+ Q +HV+ +N + K +KP+
Sbjct: 181 LVPSGSIVLPDQPQKQSSSQVPKDANHVSVDNGANTVSAKVVKPS 225
>gi|357137945|ref|XP_003570559.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Brachypodium distachyon]
Length = 320
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/314 (56%), Positives = 228/314 (72%), Gaps = 11/314 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M YSKD+LLARL++L+IEF+ Y HPAV+TVE QAK+VGN GG LSKNL LKDKKHR YIV
Sbjct: 1 MGYSKDELLARLEELKIEFTCYGHPAVLTVEEQAKHVGNFGGALSKNLLLKDKKHRLYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALADTKVDMK+LSQRLGLGKGGLRMAPEE + ++L+VPLG VTPFAL NESA V+LLL
Sbjct: 61 SALADTKVDMKILSQRLGLGKGGLRMAPEENLQQVLQVPLGCVTPFALFNESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK++ C+FHPL+ND++I+LN+++LDKFL SIG++PAYVDLEA+PAVGKD PPDLA
Sbjct: 121 DQGFKSKTSCYFHPLTNDVTIALNSSNLDKFLISIGKEPAYVDLEASPAVGKDNPPDLAD 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
FVPSG+ + + V++ + NN +K VQN K
Sbjct: 181 FVPSGAL------NSSEPVENMTPTPAPQRNNVPKEKTPEVKAKPKVQN-KGAEKPESKV 233
Query: 241 SSSFTDAEKFVEEILDRISAKLLSE-TKEGNIAQQGQELGNEIANRLRKCCYPELKNLAT 299
S++ T+ +KFV ++ D IS LSE +K+ NI + +EL + I + LR P+L++L
Sbjct: 234 SANGTNVDKFVNDVFDIISPLFLSEVSKKLNI--KPEEL-SPIVDDLRGRAAPDLESLTG 290
Query: 300 IFKNTAYTQGFHAG 313
I K +YT GFHAG
Sbjct: 291 ILKGASYTAGFHAG 304
>gi|116782324|gb|ABK22464.1| unknown [Picea sitchensis]
Length = 354
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 226/350 (64%), Gaps = 34/350 (9%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+K+QLLARL++L + F YEHP V+TVEAQAKY+G++ GG SKNLFLKDKKHR Y+V
Sbjct: 1 MGYTKEQLLARLQELGVAFESYEHPVVLTVEAQAKYIGHLEGGHSKNLFLKDKKHRLYVV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA+ T VD+KVLSQRLGLGK GLRMAPEET+ E+L+VPLG VTPFAL NESAR VALLL
Sbjct: 61 SAMTTTNVDLKVLSQRLGLGKSGLRMAPEETLKEVLQVPLGCVTPFALFNESARSVALLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D GFK Q+ FFHPLSNDM+ISL TNDLDKFL SIG++PAYVDLEA +VGKDQ PDLA
Sbjct: 121 DHGFKKQKHVFFHPLSNDMTISLTTNDLDKFLMSIGKEPAYVDLEAVVSVGKDQLPDLAV 180
Query: 181 FVPSGSTVLPDL-----PD----PASAVQ-----SAGGSHVNANNNCKAATEKAIKPAKD 226
+VP ++ +L PD P + + S VN ++N T K
Sbjct: 181 YVPMELVIVSNLHAEQGPDNETGPLNIIHRENETSKHKEKVNPDSNSTKKTSINKKETGT 240
Query: 227 VQNVKDKSAKAVNPSS--------------------SFTDAEKFVEEILDRISAKLLSET 266
V + + + NP S + TD + V ILD+ +A +LSE
Sbjct: 241 VGSTATITNEKFNPESNSTKKMSIDKKGIGTVGSTAAVTDVGELVNCILDKTTAAVLSEI 300
Query: 267 KEGNIAQQGQELGNEIANRLRKCCYPELKNLATIFKNTAYTQGFHAGKAS 316
I Q G++LG +A +R+ P++++L +FKN +YTQGF +G S
Sbjct: 301 TADAIEQHGKDLGPIVAGAVRQRLVPDMESLIMLFKNASYTQGFTSGIGS 350
>gi|115448907|ref|NP_001048233.1| Os02g0767700 [Oryza sativa Japonica Group]
gi|46805441|dbj|BAD16923.1| YbaK/prolyl-tRNA synthetase protein-like [Oryza sativa Japonica
Group]
gi|46806080|dbj|BAD17328.1| YbaK/prolyl-tRNA synthetase protein-like [Oryza sativa Japonica
Group]
gi|113537764|dbj|BAF10147.1| Os02g0767700 [Oryza sativa Japonica Group]
gi|215700962|dbj|BAG92386.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 321
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/316 (54%), Positives = 231/316 (73%), Gaps = 14/316 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+K+QLLARL++L IEFS Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y+V
Sbjct: 1 MGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+++ C+FHPL+ND++I+L++++LDKFL SIGR PAYVDLEA+P VGKD PPDLA
Sbjct: 121 DQGFKSKQSCYFHPLTNDVTIALSSSNLDKFLMSIGRQPAYVDLEASPVVGKDNPPDLAD 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
FVPSG +P+ A ++ ++V N+ EK P K V++K A+
Sbjct: 181 FVPSG------VPNSAEPIEKVTPTNVPRQND--VPKEKTCLPVKAKPKVQNKGAEKTQS 232
Query: 241 S--SSFTDAEKFVEEILDRISAKLLSE-TKEGNIAQQGQELGNEIANRLRKCCYPELKNL 297
++ + EKFV ++ D +S LSE +K+ N+ Q +EL + I + ++ +L+++
Sbjct: 233 KIPTNGANVEKFVNDVFDIMSPLFLSEVSKKLNVKQ--EELSS-IFDGFKEQATIDLESV 289
Query: 298 ATIFKNTAYTQGFHAG 313
T KN AYT GF AG
Sbjct: 290 TTSLKNAAYTAGFEAG 305
>gi|242066644|ref|XP_002454611.1| hypothetical protein SORBIDRAFT_04g034280 [Sorghum bicolor]
gi|241934442|gb|EES07587.1| hypothetical protein SORBIDRAFT_04g034280 [Sorghum bicolor]
Length = 318
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/316 (55%), Positives = 233/316 (73%), Gaps = 12/316 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+KDQLLARL++L+I+F+ Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y++
Sbjct: 1 MGYTKDQLLARLQELKIDFTCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALINESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+++ C+FHPL+ND++I+L++++LDKFL SIG+ PAYVDLEA PAV KD PPDLA
Sbjct: 121 DQGFKSKQICYFHPLTNDVTIALSSSNLDKFLISIGKQPAYVDLEAAPAVSKDNPPDLAH 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHV--NANNNCKAATEKAIKPAKDVQNV-KDKSAKA 237
VPSG + + P V + ++V + NN K KAI VQ+ + S+K
Sbjct: 181 LVPSGVSNSSEQP-----VDNTAPTNVPRHQNNVPKETEVKAITTIPKVQSKGAEISSKG 235
Query: 238 VNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNL 297
P+++ T +KFV ++ D IS L E K+ +I + +EL + I + LR P+LK++
Sbjct: 236 DKPTTN-TSVDKFVNDVFDIISPLLSEELKKLDIKK--EEL-SSILDGLRGRADPDLKSI 291
Query: 298 ATIFKNTAYTQGFHAG 313
A KN +YT GFH+G
Sbjct: 292 AMTLKNASYTNGFHSG 307
>gi|222623733|gb|EEE57865.1| hypothetical protein OsJ_08514 [Oryza sativa Japonica Group]
Length = 322
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 231/316 (73%), Gaps = 13/316 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+K+QLLARL++L IEFS Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y+V
Sbjct: 1 MGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+++ C+FHPL+ND++I+L++++LDKFL SIGR PAYVDLEA+P VGKD PPDLA
Sbjct: 121 DQGFKSKQSCYFHPLTNDVTIALSSSNLDKFLMSIGRQPAYVDLEASPVVGKDNPPDLAD 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNC--KAATEKAIKPAKDVQNVKDKSAKAV 238
FVPSG +P+ A ++ ++V N+ + +K VQN + ++
Sbjct: 181 FVPSG------VPNSAEPIEKVTPTNVPRQNDVPKEKTCLPEVKAKPKVQNKGAEKTQSK 234
Query: 239 NPSSSFTDAEKFVEEILDRISAKLLSE-TKEGNIAQQGQELGNEIANRLRKCCYPELKNL 297
P++ + EKFV ++ D +S LSE +K+ N+ Q +EL + I + ++ +L+++
Sbjct: 235 IPTNG-ANVEKFVNDVFDIMSPLFLSEVSKKLNVKQ--EELSS-IFDGFKEQATIDLESV 290
Query: 298 ATIFKNTAYTQGFHAG 313
T KN AYT GF AG
Sbjct: 291 TTSLKNAAYTAGFEAG 306
>gi|413924405|gb|AFW64337.1| hypothetical protein ZEAMMB73_906278 [Zea mays]
Length = 309
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 225/314 (71%), Gaps = 17/314 (5%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+KDQLLA L+ L+I+F+ Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y++
Sbjct: 1 MGYTKDQLLAHLQKLKIDFTCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALINESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+++ C+FHPL+ND++I+L++++LDKFL SIG+ PAYVDLEA PAVGKD PPDLA
Sbjct: 121 DQGFKSKQSCYFHPLTNDVTIALSSSNLDKFLISIGKQPAYVDLEAAPAVGKDNPPDLAH 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNP 240
VP+G P S+ Q + A N TE KP VQ+ +++ V+
Sbjct: 181 LVPTGV--------PNSSEQPVENT---APTNVLKETEVKAKPK--VQSKGAETSSKVDK 227
Query: 241 SSSFTDAEKFVEEILDRISAKLLSET-KEGNIAQQGQELGNEIANRLRKCCYPELKNLAT 299
++ T +KFV ++ + IS LSE K+ +I ++ L I LR P+LK++A
Sbjct: 228 PTTDTSVDKFVNDVFEIISPLFLSEALKKLDIKKEDLSL---ILEGLRGRADPDLKSIAM 284
Query: 300 IFKNTAYTQGFHAG 313
KN +YT GFHAG
Sbjct: 285 TLKNASYTSGFHAG 298
>gi|218191639|gb|EEC74066.1| hypothetical protein OsI_09076 [Oryza sativa Indica Group]
Length = 322
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 230/316 (72%), Gaps = 13/316 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+K+QLLARL++L IEFS Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y+V
Sbjct: 1 MGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
D+GFK+++ C+FHPL+ND++I+L++++LDKFL SIGR PAYVDLEA+P VGKD PPDLA
Sbjct: 121 DQGFKSKQSCYFHPLTNDVTIALSSSNLDKFLMSIGRQPAYVDLEASPVVGKDNPPDLAD 180
Query: 181 FVPSGSTVLPDLPDPASAVQSAGGSHVNANNNC--KAATEKAIKPAKDVQNVKDKSAKAV 238
VPSG +P+ A ++ ++V N+ + +K VQN + ++
Sbjct: 181 LVPSG------VPNSAEPIEKVTPTNVPRQNDVPKEKTCLPEVKAKPKVQNKGAEKTQSK 234
Query: 239 NPSSSFTDAEKFVEEILDRISAKLLSE-TKEGNIAQQGQELGNEIANRLRKCCYPELKNL 297
P++ + EKFV ++ D +S LSE +K+ N+ Q +EL + I + ++ +L+++
Sbjct: 235 IPTNG-ANVEKFVNDVFDIMSPLFLSEVSKKLNVKQ--EELSS-IFDGFKEQATIDLESV 290
Query: 298 ATIFKNTAYTQGFHAG 313
T KN AYT GF AG
Sbjct: 291 TTSLKNAAYTAGFEAG 306
>gi|7271117|emb|CAB81546.1| 25.7 kDa protein [Cicer arietinum]
Length = 236
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 163/230 (70%), Gaps = 3/230 (1%)
Query: 86 MAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNT 145
MAPEE + EIL+V LG VTPFA+VNESARDV+LLLD+GFK QE CFFHPLSNDMSISLN
Sbjct: 1 MAPEEALAEILQVSLGCVTPFAVVNESARDVSLLLDQGFKTQEHCFFHPLSNDMSISLNV 60
Query: 146 NDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDLPDPASA--VQSAG 203
DLD FLKSIGRDP+YVDLEANPAVGKDQPPDLAA VPSGS VLPD P S+ V
Sbjct: 61 RDLDTFLKSIGRDPSYVDLEANPAVGKDQPPDLAALVPSGSIVLPDQPGKQSSAEVPPRD 120
Query: 204 GSHVNANNNCKAATEKAIKPAKDVQNVKDKSAKAVNPSSSFTDAEKFVEEILDRISAKLL 263
G+ V+ +N K K +KP N K K V S S+ D + VEEIL + S LL
Sbjct: 121 GNIVSVDNKSKTVPAKVVKPLVG-NNSKGTLDKNVQSSRSYADVGQLVEEILHKTSKLLL 179
Query: 264 SETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATIFKNTAYTQGFHAG 313
SE E I G++LG ++++L+K + KNLA +FKNTAYT+GFHAG
Sbjct: 180 SEINEETIKIHGEQLGTTVSDKLQKHLSSDFKNLAMMFKNTAYTEGFHAG 229
>gi|297846836|ref|XP_002891299.1| hypothetical protein ARALYDRAFT_891410 [Arabidopsis lyrata subsp.
lyrata]
gi|297337141|gb|EFH67558.1| hypothetical protein ARALYDRAFT_891410 [Arabidopsis lyrata subsp.
lyrata]
Length = 153
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 133/167 (79%), Gaps = 18/167 (10%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +SKDQLL RL++L+I++S+YEHP V+TVE Q DKKHR+YIV
Sbjct: 1 MGFSKDQLLDRLQELEIDYSKYEHPPVLTVEEQ------------------DKKHRYYIV 42
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA+ DTKVDMKVLSQRLGLGKGG+RMAPEE + E+L+V LG VTPFA+VNES+RDV+LLL
Sbjct: 43 SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESSRDVSLLL 102
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
D+ FK Q RC FHPLSND+S+SLNT LDKFLKSIGRDP YVDLEAN
Sbjct: 103 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEAN 149
>gi|413924404|gb|AFW64336.1| hypothetical protein ZEAMMB73_906278 [Zea mays]
Length = 166
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 129/146 (88%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y+KDQLLA L+ L+I+F+ Y+HP V+TVE QAK+VG++GG LSKNL LKDKKHR Y++
Sbjct: 1 MGYTKDQLLAHLQKLKIDFTCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SALA TKVDMK+LSQRLGLGKGGLRMAPEE +LE+L+VPLG VTPFAL+NESA V+LLL
Sbjct: 61 SALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALINESASAVSLLL 120
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTN 146
D+GFK+++ C+FHPL+ND++I L T+
Sbjct: 121 DQGFKSKQSCYFHPLTNDVTIGLGTS 146
>gi|168011839|ref|XP_001758610.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690220|gb|EDQ76588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 189/350 (54%), Gaps = 52/350 (14%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
++++ LL+ L++ ++ + HPAV VE QA +VG++ G +SKNLFLKDKK+R Y+VS
Sbjct: 7 HTRETLLSFLQEHGVDCVTHNHPAVSIVEEQANHVGHLDGCVSKNLFLKDKKNRLYVVST 66
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILK------------------------- 97
L T+VD+K LS RLGLGKGG+R+APEE++ +L+
Sbjct: 67 LTTTQVDLKALSARLGLGKGGVRVAPEESLQSVLQCRSDILKSELIQHQILRGCLVNGDS 126
Query: 98 -------VPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDK 150
VP V+PFAL+NESAR VALLLD GF+ Q R FFHPLSND+S ++ T +LDK
Sbjct: 127 REQIVVEVPPTCVSPFALINESARSVALLLDVGFQKQSRVFFHPLSNDVSTAVTTENLDK 186
Query: 151 FLKSIGRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDLPDPASAVQSAGGSHVNAN 210
FLK+IGR+P+YVD EA VGKDQPPDLA+ VP + A +S G+
Sbjct: 187 FLKAIGREPSYVDFEAVVVVGKDQPPDLASLVPK---------EAAKETESQQGT----- 232
Query: 211 NNCKAATEKAIKPAKDVQNVKDKSAKAVNPSSS---FTDAEKFVEEILDRISAKLLSETK 267
+ K K KAV P + D + +LD A ++
Sbjct: 233 --TELKVTAVAPATKQAAAAPPKKTKAVVPKTEGVVRVDVCSVLASVLDDAVAAAVAGIH 290
Query: 268 EGNIA-QQGQELGNEIANRLRKCCYPELKNLATIFKNTAYTQGFHAGKAS 316
+ ++ Q + + +R P+L++L FKNT Y +GF + S
Sbjct: 291 SSTLENEKKQAVAEAVDAAIRHRLAPDLESLLMTFKNTVYAEGFKSATES 340
>gi|356550844|ref|XP_003543793.1| PREDICTED: LOW QUALITY PROTEIN: prolyl-tRNA synthetase associated
domain-containing protein 1-like [Glycine max]
Length = 145
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 118/143 (82%), Gaps = 2/143 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLK--DKKHRFY 58
M +SK+QLL RLK+L I FSQYEHP ++TV+ Q KYVG++GGG++K+L + DKK RFY
Sbjct: 1 MGFSKEQLLVRLKELHINFSQYEHPTILTVDLQEKYVGHLGGGVTKSLCFEGNDKKRRFY 60
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+VSAL DT++D+KVLSQRLGLGKGGLRM P E + EIL+V LG VT FA+VNE A+DV+L
Sbjct: 61 LVSALKDTQLDIKVLSQRLGLGKGGLRMTPSEALGEILQVSLGCVTSFAVVNEFAQDVSL 120
Query: 119 LLDKGFKAQERCFFHPLSNDMSI 141
LLD+GFK E FFHPLSNDM+I
Sbjct: 121 LLDQGFKTXEHYFFHPLSNDMTI 143
>gi|307107140|gb|EFN55384.1| hypothetical protein CHLNCDRAFT_134463 [Chlorella variabilis]
Length = 316
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 126/176 (71%), Gaps = 3/176 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
D LLA+L+ LQI+ + HPAVMT EAQA + + G ++KNLFLKDKK R YIV+A AD
Sbjct: 2 DALLAKLQALQIQHETHAHPAVMTCEAQAAALSGVPGVVTKNLFLKDKKGRLYIVTAAAD 61
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
TKVD+KVLS RLG GKGG+RMAP+E I VPLGSVTP A+ SA VALLLD +
Sbjct: 62 TKVDLKVLSARLGTGKGGVRMAPDEL---IPTVPLGSVTPLAIAQPSAAGVALLLDGKLR 118
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAAF 181
Q R HPL N ++ L++ L+ F++S+GR+PA+VDLEA+P + + PPDL AF
Sbjct: 119 GQPRICVHPLDNTATMVLSSEGLEAFVRSVGREPAWVDLEADPVIDMNNPPDLKAF 174
>gi|8655994|gb|AAF78267.1|AC020576_11 Contains weak similarity to 25.7 kDa protein from Cicer arietinum
gb|AJ276422 and contains a transposase mutator PF|00872
domain. ESTs gb|T13756, gb|AA712647, gb|AA585980 come
from this gene [Arabidopsis thaliana]
Length = 1206
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 86/97 (88%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++KDQLL RL++L+I++S+YEHP V+TVE QAKYV + G LSKNLFLKDKKHR+YIV
Sbjct: 1 MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILK 97
SA+ DTKVDMKVLSQRLGLGKGG+RMAPEE + E+L+
Sbjct: 61 SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQ 97
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 14/150 (9%)
Query: 164 LEANPAVGKDQPPDLAAFVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKP 223
L+ANP VGKDQ PDLA VPS S ++P++P+ S+ Q V+A A+ K KP
Sbjct: 96 LQANPVVGKDQAPDLAVCVPSNSVIVPEIPNQTSSTQIPLPKSVSAEVK-PVASAKTSKP 154
Query: 224 AKDVQNVKDKSAKAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIA 283
A V++V + SA S++ + EKFV+EILD+ SA LLSE K E +A
Sbjct: 155 ACKVKSVAENSA-----PSAYKNPEKFVQEILDKTSALLLSEAK--------GECVEALA 201
Query: 284 NRLRKCCYPELKNLATIFKNTAYTQGFHAG 313
LRK EL +L+ ++KN+AY +GF+AG
Sbjct: 202 ETLRKRLTSELTHLSIMYKNSAYAEGFYAG 231
>gi|302796659|ref|XP_002980091.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
gi|300152318|gb|EFJ18961.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
Length = 2265
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 32/253 (12%)
Query: 45 SKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVT 104
+KNL LKDKK R +++S T +D+K LS RLG+GKGG+R APEE ++E+L VP V+
Sbjct: 32 TKNLLLKDKKSRMFLISCKQSTNLDLKALSIRLGVGKGGVRFAPEENVVELLGVPPTLVS 91
Query: 105 PFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
PF L ES+ + LLLD+ F+ R F P+++++SI++ L++FL+SIG+ P YVDL
Sbjct: 92 PFVLTTESS--IVLLLDEKFETSSRLIF-PVADELSIAVTRASLEQFLESIGKTPIYVDL 148
Query: 165 EANPAVGKDQPPDLAAFVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKAATEKAIKPA 224
EA GKDQ DL+ +VPS + + GS + ++ + E KPA
Sbjct: 149 EAALQAGKDQ-ADLSVYVPSKKE------SSTEGMPNGTGSELRKPSSESKSKE---KPA 198
Query: 225 KDVQNVKDKSAKAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIAN 284
V+ D+S + + F E IL I++K L ++ + E
Sbjct: 199 AIVRG--DESRR-----TDFASTEALSSLILSTIASKALEKSDK------------ETWE 239
Query: 285 RLRKCCYPELKNL 297
+ K PEL+NL
Sbjct: 240 AIEKGVKPELENL 252
>gi|307078140|ref|NP_001182490.1| PrdX-deacylase domain 1 [Gallus gallus]
Length = 174
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
++ L RL+DL I + EHP V TVE +V ++ GG SKNLFLKDKK + F++V+ L
Sbjct: 8 REALEQRLRDLGIAATTTEHPEVFTVEEMMAHVQHLKGGHSKNLFLKDKKRKEFWLVTVL 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +VD+ L+++LG+G G LR A E MLE L+V G TP AL + DV L+LD G
Sbjct: 68 HDRQVDLNHLAKKLGVGSGNLRFADENAMLEKLQVGQGCATPLALFCDHG-DVRLVLDAG 126
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
F E+ +FHP++N ++ L+ D KF+KS G DP V + +
Sbjct: 127 FLEGGHEKVYFHPMTNGATMGLSPEDFLKFVKSTGHDPIVVHFDED 172
>gi|407781201|ref|ZP_11128421.1| hypothetical protein P24_03256 [Oceanibaculum indicum P24]
gi|407208627|gb|EKE78545.1| hypothetical protein P24_03256 [Oceanibaculum indicum P24]
Length = 184
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
+ + D LLARL+ + + + ++ HP + TVE + G + GG KNLFLKD+K ++++V
Sbjct: 21 LPTTADALLARLQAMGVTYVEHRHPPLFTVEDSKQLRGELPGGHCKNLFLKDRKGQYWLV 80
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
AL D +D+K L +++G + L + + E+L V G+VTPF+L+N++AR V L+L
Sbjct: 81 VALEDRPIDLKTLDKKIGAAR--LSFGSADRLWEVLGVRPGAVTPFSLINDTARQVKLVL 138
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
DKG A + +HPL ND +I+++ L FL+ G DP +DL+
Sbjct: 139 DKGMLAHDPLNYHPLVNDRTIAVSPEGLLAFLRQTGHDPMILDLQ 183
>gi|302811594|ref|XP_002987486.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
gi|300144892|gb|EFJ11573.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
Length = 2281
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 37/262 (14%)
Query: 45 SKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVT 104
+KNL +KDKK R +++S T +D+K LS RLG+GKGG+R APEE ++E+L VP V+
Sbjct: 16 TKNLLVKDKKSRMFLISCKQSTNLDLKALSIRLGVGKGGVRFAPEENVVELLGVPPALVS 75
Query: 105 PFALVNESARDVALLLDKGFKAQERCFFHPLSNDMS---------ISLNTNDLDKFLKSI 155
PF L +S + LLLD+ F+ R F P+S+++S I++ L++FL+SI
Sbjct: 76 PFVLTTDSQSSIVLLLDEKFETSSRLIF-PVSDELSIGTISSFCIIAVTRASLEQFLESI 134
Query: 156 GRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDLPDPASAVQSAGGSHVNANNNCKA 215
G+ P YVDLEA GKDQ DL+ +VPS + +A G+
Sbjct: 135 GKTPIYVDLEAALQAGKDQ-ADLSVYVPSKKE------SSTEGMPTADGTGSELRKPSSE 187
Query: 216 ATEKAIKPAKDVQNVKDKSAKAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQG 275
+ K KPA V+ D+S + + F E IL I++K L ++
Sbjct: 188 SQSKE-KPAAIVRG--DESRR-----TDFASTEALSSLILSTIASKALEKS--------D 231
Query: 276 QELGNEIANRLRKCCYPELKNL 297
+E I R++ PEL+NL
Sbjct: 232 KETWEAIEKRVK----PELENL 249
>gi|224047488|ref|XP_002199608.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Taeniopygia guttata]
Length = 172
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
++ L RL+DL I EHP V TVE +V + GG SKNLFLKDKK + F++V+ L
Sbjct: 6 REALERRLRDLGIATVIAEHPQVFTVEEMMSHVQQMEGGHSKNLFLKDKKKKGFWLVTVL 65
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +V++ L ++LG+G G LR A E MLE LKV G TP AL + DV L+LD
Sbjct: 66 HNRQVNLNELGKKLGVGSGNLRFADENAMLEKLKVGQGCATPLALFCDQG-DVRLVLDAA 124
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ +D KF++S G DP + + +
Sbjct: 125 LLHGGHEKVYFHPMTNSATMGLSPDDFLKFVRSTGHDPIIIHFDED 170
>gi|374292769|ref|YP_005039804.1| hypothetical protein AZOLI_2380 [Azospirillum lipoferum 4B]
gi|357424708|emb|CBS87587.1| Conserved protein of unknown function; YbaK/prolyl-tRNA synthetase
associated domain [Azospirillum lipoferum 4B]
Length = 181
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
+ S DQLLARL L I+ + + HP + TVE G + GG KNLFLKDKK + ++V
Sbjct: 15 LPTSPDQLLARLDALGIQATTHSHPPLHTVEESKALRGALPGGHCKNLFLKDKKDQHWLV 74
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
AL D +VD+ L + +G L A + + +L + GSVTPFALVN++ V ++L
Sbjct: 75 VALEDARVDLNRLDK--AIGSARLSFASADRLWRVLGIRPGSVTPFALVNDTGHKVRVVL 132
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K + +HPL ND + ++ +DL +F+++ G +PA V+
Sbjct: 133 QKAMMEHDLLNYHPLLNDRTTAIRRDDLLRFIRACGHEPAIVEF 176
>gi|340508229|gb|EGR33982.1| prolyl-tRNA synthetase family protein, putative [Ichthyophthirius
multifiliis]
Length = 688
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
K ++L L L+IE+ YEHP V TVE + L KNLF DKKH +Y+++A +
Sbjct: 10 KTEMLNYLNQLKIEYKYYEHPPVFTVEEMLNNMKLEKAPLIKNLFYVDKKHNYYLIAAKS 69
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
DTKV+ K + + L G +R PEE L ++K G + F+LVN++ + V L++DK
Sbjct: 70 DTKVE-KNFWKNINLAPGNIRFCPEEQTLNVIKCQKGHLNAFSLVNDNEKKVKLIIDKNL 128
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
++ E FHP+ ND ++ L ++ K+L IG D
Sbjct: 129 ESHEYWSFHPMENDATVELKQSEFKKYLSLIGHD 162
>gi|327262751|ref|XP_003216187.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Anolis carolinensis]
Length = 177
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
++ L +RL+ L IE EHP V TVE YV ++ G SKNLFLKDKK + F++V+ L
Sbjct: 11 REALQSRLQALGIEALSVEHPEVFTVEEMMPYVQHLEGAHSKNLFLKDKKKKGFFLVTVL 70
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ ++++ L+++LG+G G LR A E M++ LKV G TP AL + DV +LD
Sbjct: 71 HNRQINLNDLAKKLGVGSGNLRFADEAAMVDKLKVGQGCATPLALFCDQG-DVKFVLDAS 129
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
F R +FHP++N ++ L+ +D KFLKS G +P V +
Sbjct: 130 FLKGGHNRVYFHPMTNAATMGLHPDDFLKFLKSTGHEPIIVHFD 173
>gi|197103484|ref|YP_002128861.1| DNA-binding protein [Phenylobacterium zucineum HLK1]
gi|196476904|gb|ACG76432.1| DNA-binding protein [Phenylobacterium zucineum HLK1]
Length = 171
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
MA ++D+LLA ++ + + ++HPAV VE + I G +KNLFLKD K + +++
Sbjct: 1 MAMTRDELLAYFDEIGVRHATFDHPAVFRVEEGEEIKARIPGAHTKNLFLKDAKGQLWLI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SA +D+K L Q +G + L E M E L V GSVT FALVN+ AR V +L
Sbjct: 61 SAEGHAVIDLKRLHQVIGSAR--LSFGNAELMEETLGVTPGSVTAFALVNDRARRVRFVL 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
D+ E FHPL+N + +++ DL +FL +IG +P VD +A V
Sbjct: 119 DRTLAEAELVNFHPLTNTATTTVSGADLRRFLAAIGVEPMVVDFQAMAVV 168
>gi|159489152|ref|XP_001702561.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280583|gb|EDP06340.1| predicted protein [Chlamydomonas reinhardtii]
Length = 97
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +KD+L+A+LKD + F +EHP VMTVEAQ + + KNLF+KDKKHR YI+
Sbjct: 1 MPLTKDELIAKLKDAGVSFESFEHPPVMTVEAQIAALPGNPQTVLKNLFVKDKKHRCYII 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILK 97
+AL DTK+DM+VLS RLG GKGGLR+APEE +LE+L+
Sbjct: 61 TALPDTKIDMQVLSARLGTGKGGLRLAPEELLLEVLQ 97
>gi|387017802|gb|AFJ51019.1| Prolyl-tRNA synthetase associated domain-containing protein 1-like
[Crotalus adamanteus]
Length = 178
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
+ L A L+ L I+ EHPAV TVE YV ++ G SKNLFLKDK+ + F++V+ L
Sbjct: 12 RQALEAHLQGLGIQALSVEHPAVFTVEEMMPYVQHLNGAHSKNLFLKDKRKKGFWLVTVL 71
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ ++++ L+++LG+G G LR A ML+ LKV G TP AL + +V +LD G
Sbjct: 72 HNRQINLNDLAKKLGVGSGNLRFADGAAMLDKLKVGQGCATPLALFCDQG-NVNFVLDAG 130
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
F +R +FHP++N ++ L+ +D KFLKS G +P V +
Sbjct: 131 FLEGGHDRLYFHPMTNAATMGLHPDDFLKFLKSTGHEPIIVHFD 174
>gi|260836511|ref|XP_002613249.1| hypothetical protein BRAFLDRAFT_113782 [Branchiostoma floridae]
gi|229298634|gb|EEN69258.1| hypothetical protein BRAFLDRAFT_113782 [Branchiostoma floridae]
Length = 175
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+ +L L+ L I+ EHP V TVE KYV + G SKNLFL+DKK + ++++
Sbjct: 8 GRAELETELEKLGIQTETIEHPEVFTVEEMMKYVSHAPGAHSKNLFLRDKKKKNLWVLTI 67
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L + +V++ L+++LG G GG+R A E MLE L V G VTP AL N+ ++ LLD
Sbjct: 68 LHNRQVNLGWLAKQLGAGSGGVRFADESIMLEKLGVGQGCVTPLALFNDKKGEIKFLLDA 127
Query: 123 GFK--AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+ E+ F HP++N S+ ++ D KF+K+ G +P + E
Sbjct: 128 DIAEGSHEKIFCHPMTNAASMGMSVQDFLKFVKATGHEPKLIQFE 172
>gi|147907238|ref|NP_001084854.1| prolyl-tRNA synthetase associated domain-containing protein 1
[Xenopus laevis]
gi|82185249|sp|Q6NRL0.1|PRXD1_XENLA RecName: Full=Prolyl-tRNA synthetase associated domain-containing
protein 1; AltName: Full=PrdX deacylase
domain-containing protein 1; AltName: Full=Prolyl-tRNA
synthetase associated domain-containing protein 1
pseudogene
gi|47123981|gb|AAH70739.1| MGC83731 protein [Xenopus laevis]
Length = 168
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
+ +LLA L +L I EHP V TVE +V ++GG SKNLFLKDKK + ++VS L
Sbjct: 6 RQELLAYLHELDIRPVCAEHPEVFTVEEMMPHVQHLGGAHSKNLFLKDKKKKGLWLVSVL 65
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +V++ L+++L LG G LR A E +MLE LKV G TP AL + DV +LD
Sbjct: 66 HDRQVNLNDLAKKLNLGSGNLRFADEASMLEKLKVGQGCATPLALFCDRG-DVQFVLDAQ 124
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
F ER +FHP++N ++ + + FLK G DP + +
Sbjct: 125 FLEGGYERVYFHPMTNAATLGMTPQEFVTFLKKTGHDPIIIHFD 168
>gi|403260658|ref|XP_003922778.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Saimiri boliviensis boliviensis]
Length = 172
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I+ EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIQTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + A DV +LD F
Sbjct: 73 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCD-AGDVKFVLDSAFLEGVH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKNTGHDPIILNFDKN 171
>gi|288959147|ref|YP_003449488.1| prolyl-tRNA synthetase associated protein [Azospirillum sp. B510]
gi|288911455|dbj|BAI72944.1| prolyl-tRNA synthetase associated region [Azospirillum sp. B510]
Length = 187
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
+ + DQLLARL L I + HP + TVE G + GG KNLFLKDKK + ++V
Sbjct: 20 LPTAPDQLLARLDALGIRAVTHSHPPLHTVEESKALRGALPGGHCKNLFLKDKKDQHWLV 79
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
AL D +VD+ L + +G + L A E + L + GSVTPFALVN+S V ++L
Sbjct: 80 VALEDARVDLNRLDKLIGSAR--LSFASAERLWRFLGIRPGSVTPFALVNDSELKVRVVL 137
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K E +HPL ND + ++ +DL +F+++ G +PA V+
Sbjct: 138 QKAMMEHELLNYHPLLNDRTTAIGRDDLLRFIRACGHEPAVVEF 181
>gi|345329124|ref|XP_001510211.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Ornithorhynchus anatinus]
Length = 173
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RLK L I EHP V TVE +V ++ G SKNLFLKDKK + F++V+ L D +V+
Sbjct: 14 RLKALGIASVSVEHPEVFTVEEMMPHVKHLKGAHSKNLFLKDKKKKGFWLVTVLHDRQVN 73
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E M E L+V G TP AL + DV +LD F
Sbjct: 74 LNDLAKKLGVGSGNLRFADEAAMQEKLQVGQGCATPLALFCDDG-DVKFVLDSAFVEGGH 132
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 133 EKVYFHPMTNSATMGLDPADFLTFVKTTGHDPVILNFDEN 172
>gi|417408472|gb|JAA50786.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 187
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 28 RLDALGIRREVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 87
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV L+LD F
Sbjct: 88 LNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDHG-DVQLVLDSAFLEGGH 146
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 147 EKVYFHPMTNAATMGLSPEDFLTFMKKTGHDPIILNFDKN 186
>gi|83592459|ref|YP_426211.1| ala-tRNA(Pro) hydrolase [Rhodospirillum rubrum ATCC 11170]
gi|386349176|ref|YP_006047424.1| ala-tRNA(Pro) hydrolase [Rhodospirillum rubrum F11]
gi|83575373|gb|ABC21924.1| Ala-tRNA(Pro) hydrolase [Rhodospirillum rubrum ATCC 11170]
gi|346717612|gb|AEO47627.1| ala-tRNA(Pro) hydrolase [Rhodospirillum rubrum F11]
Length = 171
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
LLA L +L I EHP V TVE I G KNLFLKD K + ++V D
Sbjct: 9 LLAHLSELAISSVTTEHPPVHTVEEAKATHDQIAGCHCKNLFLKDAKGQLWLVVCPYDRV 68
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K L +R+G + L E + E+L V GSVTPFALVN++A V ++LD+ AQ
Sbjct: 69 VDLKTLHRRIGAAR--LSFGKPELLDEVLGVRPGSVTPFALVNDTAHRVKVVLDRAMMAQ 126
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+R +HPL N + +++ DL +FL + G+ A VDLE
Sbjct: 127 DRLNYHPLVNTATTTISAADLRRFLAACGQSVAEVDLE 164
>gi|355734197|gb|AES11273.1| hypothetical protein [Mustela putorius furo]
Length = 171
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 4/164 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
+L RL L I EHP V TVE +V ++ G SKNLFLKDKK + +++V+ L D
Sbjct: 9 ELEQRLGALAIHTEVVEHPEVFTVEEMMPHVQHLKGAHSKNLFLKDKKKKGYWLVTVLHD 68
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF- 124
++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 69 RQINLNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFL 127
Query: 125 -KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 128 EGGHEKVYFHPMTNAATLGLSPEDFITFVKNTGHDPIILNFDKN 171
>gi|72014001|ref|XP_779908.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like isoform 1 [Strongylocentrotus purpuratus]
gi|115952920|ref|XP_001177496.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like isoform 1 [Strongylocentrotus purpuratus]
Length = 181
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+ +L+A L I EHP V TVEA ++ ++ G KNLF+KDKK R Y+++AL
Sbjct: 18 RTELIAEFDRLGIVHETLEHPEVFTVEAMMPHIQHLTGAFCKNLFVKDKKKRLYLLTALH 77
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D + + + +++G GGLR+A E + E L V GSVTPFA+ N+ A DV +LD
Sbjct: 78 DRPIQLNAVCKKVG-ASGGLRLADESILKEKLGVTQGSVTPFAIFNDKAGDVKFILDSDI 136
Query: 125 --KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ F HP+ N S +++ DL KF + +G +P +D
Sbjct: 137 VNGGHKKMFGHPMVNTASTAISPEDLMKFAREMGHEPVLLDF 178
>gi|296223825|ref|XP_002757790.1| PREDICTED: putative prolyl-tRNA synthetase associated
domain-containing protein 1-like [Callithrix jacchus]
Length = 172
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + A DV +LD F
Sbjct: 73 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCD-AGDVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKKTGHDPIILNFDKN 171
>gi|351702808|gb|EHB05727.1| UPF0566 protein [Heterocephalus glaber]
Length = 171
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 15 LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVL 73
L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +V++ L
Sbjct: 17 LAIRTETVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQVNLNDL 76
Query: 74 SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCF 131
++ LG+G G LR A E MLE LKV G TP AL + RDV +LD F E+ +
Sbjct: 77 AKHLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDD-RDVKFVLDSAFLEGGHEKVY 135
Query: 132 FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
F+P++N ++ L+ D KF+K+ G DP ++ + N
Sbjct: 136 FYPMTNAATMGLSPEDFLKFVKTTGHDPVILNFDKN 171
>gi|348543465|ref|XP_003459204.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Oreochromis niloticus]
Length = 169
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
+ QL L+ L I+ S EHP V TVE ++ ++ G ++KNLFLKDKK + ++VSA
Sbjct: 6 RAQLEKHLQTLHIQTSCVEHPPVFTVEEMMPHLQSVNGAVTKNLFLKDKKKKGLWLVSAR 65
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +V++ L+++LG+G G LR A E MLE LKV G T AL+ + R V +LD+
Sbjct: 66 HDRQVNLNDLAKKLGVGSGNLRFAEEAAMLEKLKVGQGCATALALLFDQDRSVKFVLDRD 125
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E +FHP++N ++ L +DL +FLK G +P
Sbjct: 126 LVEGGHEMVYFHPMTNAATMGLRPDDLLRFLKETGHEP 163
>gi|291386769|ref|XP_002709751.1| PREDICTED: PrdX-deacylase domain 1-like [Oryctolagus cuniculus]
Length = 172
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL+ L I EHP V TVE +V ++ G SKNLFLKDKK + ++V+ L D +++
Sbjct: 13 RLRALDIRTEIVEHPEVFTVEEMMPHVQHLKGAHSKNLFLKDKKKKNHWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPQDFLTFVKNTGHDPIILNFDKN 171
>gi|311252611|ref|XP_003125182.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Sus scrofa]
Length = 171
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLSALAIRTEIVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLEKLKVVQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 132 EKVYFHPMTNTATMGLSPEDFLTFVKNTGHDPIILNFDKN 171
>gi|301614991|ref|XP_002936965.1| PREDICTED: UPF0566 protein-like [Xenopus (Silurana) tropicalis]
Length = 169
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
+ +LLA L++L I+ EHP V TVE +V ++ G SKNLFLKDKK + F++V+ L
Sbjct: 6 RQELLAYLQELGIQPVCVEHPEVFTVEEMMPHVQHLKGAHSKNLFLKDKKKKGFWLVTVL 65
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +V++ L+++L +G G LR A E +MLE LKV G TP AL + DV +LD
Sbjct: 66 HDRQVNLNDLAKKLNVGSGNLRFADEASMLEKLKVGQGCATPLALFCDKG-DVKFVLDAQ 124
Query: 124 F--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
ER +FHP++N ++ + + FLK G DP V +
Sbjct: 125 LLEGGHERVYFHPMTNAATLGITPEEFVTFLKKTGHDPVIVQFDG 169
>gi|149727568|ref|XP_001496734.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Equus caballus]
Length = 172
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIV 60
A + +L RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V
Sbjct: 4 AEMRAELEQRLDALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLV 63
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ L D ++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +L
Sbjct: 64 TVLHDRQINLNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVL 122
Query: 121 DKGF--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
D F E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 123 DSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFVKKTGHDPIILNFDKN 171
>gi|332226526|ref|XP_003262440.1| PREDICTED: putative prolyl-tRNA synthetase associated
domain-containing protein 1-like [Nomascus leucogenys]
Length = 172
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFDKN 171
>gi|122692601|ref|NP_001073758.1| prolyl-tRNA synthetase associated domain-containing protein 1 [Bos
taurus]
gi|182702192|sp|A1A4Q2.1|PRXD1_BOVIN RecName: Full=Prolyl-tRNA synthetase associated domain-containing
protein 1; AltName: Full=PrdX deacylase
domain-containing protein 1
gi|119224104|gb|AAI26804.1| Hypothetical LOC526913 [Bos taurus]
gi|296482593|tpg|DAA24708.1| TPA: hypothetical protein LOC526913 [Bos taurus]
Length = 171
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLAALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKNTGHDPIILNFDKN 171
>gi|440911220|gb|ELR60921.1| PrdX-deacylase domain-containing protein 1 [Bos grunniens mutus]
Length = 171
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLAALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKNTGHDPIILNFDKN 171
>gi|395731815|ref|XP_002812066.2| PREDICTED: putative prolyl-tRNA synthetase associated
domain-containing protein 1-like [Pongo abelii]
Length = 172
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFDKN 171
>gi|402890937|ref|XP_003908724.1| PREDICTED: putative prolyl-tRNA synthetase associated
domain-containing protein 1-like [Papio anubis]
Length = 247
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 88 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 147
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD
Sbjct: 148 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAILEGGH 206
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 207 EKVYFHPMTNAATMGLSPKDFLTFVKTTGHDPIILNFDKN 246
>gi|431912681|gb|ELK14699.1| UPF0566 protein [Pteropus alecto]
Length = 171
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFVTFVKKTGHDPIILNFDKN 171
>gi|410954819|ref|XP_003984059.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Felis catus]
Length = 171
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +V+
Sbjct: 13 RLGALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQVN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKKTGHDPIILNFDKN 171
>gi|444706539|gb|ELW47876.1| Prolyl-tRNA synthetase associated domain-containing protein 1
[Tupaia chinensis]
Length = 241
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++
Sbjct: 83 LGALDIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQINL 142
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQE 128
L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F E
Sbjct: 143 NELAKQLGVGSGNLRFAEETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHE 201
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 202 KIYFHPMTNAATMGLSPEDFLTFVKKTGHDPIILNFDKN 240
>gi|348563510|ref|XP_003467550.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Cavia porcellus]
Length = 171
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +V+
Sbjct: 13 RLGALDIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQVN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L++ LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKHLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
+ +FHP++N ++ L+ D KF+K+ G DP ++ + N
Sbjct: 132 KMVYFHPMTNAATMGLSPEDFLKFVKTTGHDPIILNFDKN 171
>gi|301756474|ref|XP_002914085.1| PREDICTED: UPF0566 protein-like [Ailuropoda melanoleuca]
Length = 172
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F++ G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVRKTGHDPIIINFDKN 171
>gi|118401186|ref|XP_001032914.1| prolyl-tRNA synthetase family protein [Tetrahymena thermophila]
gi|89287259|gb|EAR85251.1| prolyl-tRNA synthetase family protein [Tetrahymena thermophila
SB210]
Length = 691
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+KD+ LK + EF +Y+H VE KY+ L KNLF +DKK +Y+V A
Sbjct: 9 TKDETCDYLKSINFEFKRYDHEPCFNVEDMHKYLKLEKAPLIKNLFYQDKKGNYYLVVAK 68
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV-ALLLDK 122
DTKV+ K L +++ L G +R+A +E + +LKV G V PFALVN++ + V AL++D+
Sbjct: 69 HDTKVE-KTLWKQVNLAPGNMRLAADEKLEAVLKVKRGHVNPFALVNDTEKLVKALIIDE 127
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
K +E FHP+ N + + KF+ +IGR +V L+
Sbjct: 128 HLKKEEYWAFHPMDNSACVEFKQTEFQKFIDAIGRTFVHVRLD 170
>gi|426223657|ref|XP_004005991.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Ovis aries]
Length = 165
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLS 74
QI EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+
Sbjct: 12 QIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQINLNDLA 71
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFF 132
++LG+G G LR A E MLE LKV G TP AL + DV +LD F E+ +F
Sbjct: 72 KQLGVGSGNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHEKVYF 130
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
HP++N ++ L+ D F+K+ G DP ++ + N
Sbjct: 131 HPMTNTATMGLSPEDFLTFVKNTGHDPIILNFDKN 165
>gi|344291800|ref|XP_003417618.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Loxodonta africana]
Length = 171
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
+L RL L I EHP V TVE +V ++ G SKNLFLKDKK + +++V+ L D
Sbjct: 9 ELEQRLGALAIRTEVVEHPEVFTVEEMMPHVQHLKGAHSKNLFLKDKKKKGYWLVTVLHD 68
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF- 124
++++ L+++LG+G G LR A E M+E LKV G TP AL + DV +LD F
Sbjct: 69 RQINLNDLAKQLGVGSGNLRFADETAMIEKLKVSQGCATPLALFCDDG-DVTFVLDSAFL 127
Query: 125 -KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ N
Sbjct: 128 EGGHEKVYFHPMTNAATMGLSPEDFLMFVKKTGHDPIILNFGKN 171
>gi|326914735|ref|XP_003203678.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Meleagris gallopavo]
Length = 155
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Query: 27 VMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLR 85
V TVE +V ++ GG SKNLFLKDKK + F++V+ L D +VD+ L+++LGLG G LR
Sbjct: 11 VFTVEEMMAHVRHMKGGHSKNLFLKDKKKKGFWLVTVLHDRQVDLNHLAKKLGLGSGNLR 70
Query: 86 MAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISL 143
A E+ MLE L+V G TP AL + DV +LD G E+ +FHP++N ++ L
Sbjct: 71 FADEKAMLEKLQVGQGCATPLALFCDHG-DVKFVLDAGLLEGGHEKVYFHPMTNCATMGL 129
Query: 144 NTNDLDKFLKSIGRDPAYVDLEAN 167
+ D KF+KS G DP V + +
Sbjct: 130 SPEDFLKFVKSTGHDPIVVHFDED 153
>gi|389690838|ref|ZP_10179731.1| hypothetical protein MicloDRAFT_00018430 [Microvirga sp. WSM3557]
gi|388589081|gb|EIM29370.1| hypothetical protein MicloDRAFT_00018430 [Microvirga sp. WSM3557]
Length = 175
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 1 MAY-SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYI 59
MA+ S +LL RL L I+ EH V TV A +I G SKNLF+KDKK RF++
Sbjct: 1 MAHLSPRELLDRLSSLGIKTETVEHAPVFTVAESASVKEHIPGAHSKNLFVKDKKGRFFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
+SA DT +D+K + +G G L E + +L V GSVT FA+ N++ V ++
Sbjct: 61 ISAKHDTAIDLKRTHEAIG-ASGRLSFGSAEQLRALLGVEPGSVTAFAVANDTDGRVTMV 119
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
LD ER FHPL N M+ ++ DL FL++ G DP + L PA
Sbjct: 120 LDANLMEHERVNFHPLVNSMTTGISREDLVTFLRATGHDPLILRLPEPPA 169
>gi|397521622|ref|XP_003830891.1| PREDICTED: LOW QUALITY PROTEIN: putative prolyl-tRNA synthetase
associated domain-containing protein 1-like [Pan
paniscus]
Length = 172
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP + TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 14 RLGALAIHTEVVEHPELFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 73
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 74 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDG--DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFDKN 171
>gi|332813176|ref|XP_525758.3| PREDICTED: LOW QUALITY PROTEIN: putative prolyl-tRNA synthetase
associated domain-containing protein 1-like [Pan
troglodytes]
Length = 172
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP + TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 14 RLGALAIHTEVVEHPELFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 73
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 74 LNELAKQLGVGSGNLRFADETAMLENLKVGQGCATPLALFCDG--DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFDKN 171
>gi|182702225|sp|A6NEY8.3|PRXD1_HUMAN RecName: Full=Putative prolyl-tRNA synthetase associated
domain-containing protein 1; AltName: Full=PrdX
deacylase domain-containing protein 1; AltName:
Full=Prolyl-tRNA synthetase associated domain-containing
protein 1 pseudogene
Length = 169
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ D F+K G DP ++ +
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFD 169
>gi|426335613|ref|XP_004029310.1| PREDICTED: LOW QUALITY PROTEIN: putative prolyl-tRNA synthetase
associated domain-containing protein 1-like [Gorilla
gorilla gorilla]
Length = 172
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP + TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIHTEVVEHPELFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L++ LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNELAKXLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP ++ + N
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFDKN 171
>gi|359320587|ref|XP_003639376.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Canis lupus familiaris]
Length = 172
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E ML+ LKV G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADETAMLDKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
E+ +FHP++N ++ L+ D F+K G DP + + N
Sbjct: 132 EKVYFHPMTNSATMGLSPEDFLTFVKKTGHDPIILRFDEN 171
>gi|347759066|ref|YP_004866628.1| DNA-binding protein [Micavibrio aeruginosavorus ARL-13]
gi|347591584|gb|AEP10626.1| DNA-binding protein, putative [Micavibrio aeruginosavorus ARL-13]
Length = 182
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ D L RL DL I ++ + HPA TVE ++ +I G +NLF++DK+ ++VSA
Sbjct: 16 TPDALFKRLDDLGILYTTWHHPAFFTVEEGLEFEKDIPGLHCRNLFVRDKRETMFLVSAA 75
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+TK+D+K LS L G+ L E + L V GSV P+A++N++A+ V ++LD
Sbjct: 76 NETKIDLKKLSALLDCGR--LSFGSPERLWANLGVRPGSVCPYAIINDTAQAVTMVLDDT 133
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGK 172
FHP+ N M+I + DL +F++S G P +DL A G+
Sbjct: 134 IMRATTVNFHPMVNTMTIGVAPQDLVRFIESTGHTPLILDLSATAPEGE 182
>gi|157822527|ref|NP_001099492.1| prdX-deacylase domain-containing protein 1 [Rattus norvegicus]
gi|149044845|gb|EDL98031.1| similar to RIKEN cDNA 2010316F05 (predicted) [Rattus norvegicus]
gi|187469332|gb|AAI67083.1| RGD1308179 protein [Rattus norvegicus]
Length = 169
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L ++LG+G G LR A E MLE LKV G TP AL + DV +LD F
Sbjct: 73 LNHLGKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ D F+K+ G DP ++ +
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLVFVKATGHDPIILNFD 169
>gi|220923320|ref|YP_002498622.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium nodulans ORS 2060]
gi|219947927|gb|ACL58319.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
nodulans ORS 2060]
Length = 175
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M Y D LLA ++ I+ +EHP V+TVE + G+I G +KNLFL+D K +++V
Sbjct: 1 MPYDSDALLATIRTGGIQADLHEHPPVLTVEEMMEVCGDIKGAHTKNLFLRDGKKNYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D ++D+K L LG KGGL A +E + E L V G+V+P A +N++A V + +
Sbjct: 61 TLPHDARLDLKALRPVLG-AKGGLSFASDEALREKLHVISGAVSPLAAMNDAAGIVTVFI 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
+ A+ER HPL++D ++S+ DL L + G P L + AV
Sbjct: 120 ESSLLAEERINVHPLTSDRTLSIRPGDLVDILTAHGHAPHAFVLSVSEAV 169
>gi|126303846|ref|XP_001375203.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Monodelphis domestica]
Length = 169
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
+L+ L I EHP V TVE ++ ++ G SKNLFLKDK+ + +++V+ L D K++
Sbjct: 13 QLRALAIPTVSVEHPEVFTVEEMMPHLKHLKGAHSKNLFLKDKRKKSYWLVTVLHDRKIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L+++LG+G G LR A E +MLE L+V G TP AL + DV +LD F
Sbjct: 73 LNDLAKQLGVGSGNLRFADEMSMLEKLRVGQGCATPLALFCDQG-DVTFVLDAAFLEGGY 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ +D F+K G DP V +
Sbjct: 132 EKVYFHPMTNTATMGLSPDDFLTFVKKTGHDPIIVKFD 169
>gi|395508037|ref|XP_003758322.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Sarcophilus harrisii]
Length = 161
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L+DL I EHP V TVE ++ ++ G SKNLFLKDK+ + +++V+ L K+++
Sbjct: 6 LRDLAIPTVSVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKRKKNYWLVTVLHVRKINL 65
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQE 128
L+++LG+G G LR A E +MLE LKV G TP AL + DV +LD F E
Sbjct: 66 NDLAKQLGVGSGNLRFADEISMLEKLKVGQGCATPLALFCDQG-DVRFVLDSAFLEGGYE 124
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+ +FHP++N ++ L+ +D F+K G DP V
Sbjct: 125 KVYFHPMTNTATMGLSPDDFLTFVKKTGHDPMIV 158
>gi|16124366|ref|NP_418930.1| DNA-binding protein [Caulobacter crescentus CB15]
gi|221233049|ref|YP_002515485.1| DNA-binding protein [Caulobacter crescentus NA1000]
gi|13421216|gb|AAK22098.1| DNA-binding protein, putative [Caulobacter crescentus CB15]
gi|220962221|gb|ACL93577.1| DNA-binding protein [Caulobacter crescentus NA1000]
Length = 168
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L A ++ +HP V VE + + GG +KNLFLKD K + +++SAL
Sbjct: 3 TRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFLKDAKGQLWLISAL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T +D+K L +G G+ L P+E MLE L V GSVT F L+N++ + V +LDK
Sbjct: 63 GETTIDLKKLHHVIGSGR--LSFGPQEMMLETLGVTPGSVTAFGLINDTEKRVRFVLDKA 120
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
+ FHPL ND + +++ L +FL ++G +P VD A VG
Sbjct: 121 LADSDPVNFHPLKNDATTAVSQAGLRRFLAALGVEPMIVDFAAMEVVG 168
>gi|432902864|ref|XP_004077049.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like isoform 1 [Oryzias latipes]
Length = 169
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 90/146 (61%), Gaps = 3/146 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQ 75
I+ + EHP V TVE ++ ++ G ++KNLFLKDKK + ++VSA D +V++ L++
Sbjct: 18 IQTTCVEHPPVFTVEEMMPHLQDVSGAVTKNLFLKDKKKKGLWLVSARHDHQVNLNELAK 77
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFH 133
+LG+G G LR A E MLE LKV G T AL+ + + V +LD+ ER +FH
Sbjct: 78 KLGVGSGNLRFADEAAMLEKLKVGQGCATALALLFDKDQSVKFILDRDLVEGGHERIYFH 137
Query: 134 PLSNDMSISLNTNDLDKFLKSIGRDP 159
P++N ++ L +DL +FLK G +P
Sbjct: 138 PMTNSATMGLRPDDLLRFLKETGHEP 163
>gi|384261987|ref|YP_005417173.1| Ala-tRNA(Pro) hydrolase [Rhodospirillum photometricum DSM 122]
gi|378403087|emb|CCG08203.1| Ala-tRNA(Pro) hydrolase [Rhodospirillum photometricum DSM 122]
Length = 170
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
D LLARL +L + + H AV TV A I G KNLFLKD K + ++VS D
Sbjct: 7 DALLARLAELGLAATTTTHEAVFTVAASESLYARIPGVHCKNLFLKDAKGKVWLVSCPHD 66
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
VD+K L +R+G G+ L E + ++L V GSVTPF ++N++ V ++LD
Sbjct: 67 RAVDLKTLPRRIGSGR--LSFGRAELLDQLLGVIPGSVTPFGVINDTTNAVTVVLDAWMV 124
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
AQ + FHPL N + ++ DL FL++ DP VDLE+
Sbjct: 125 AQPQVNFHPLINTATTTVAGADLVTFLRACDHDPLIVDLES 165
>gi|21312706|ref|NP_080741.1| prolyl-tRNA synthetase associated domain-containing protein 1
isoform 2 [Mus musculus]
gi|81905618|sp|Q9D820.1|PRXD1_MOUSE RecName: Full=Prolyl-tRNA synthetase associated domain-containing
protein 1; AltName: Full=PrdX deacylase
domain-containing protein 1
gi|12842841|dbj|BAB25753.1| unnamed protein product [Mus musculus]
gi|109732419|gb|AAI15901.1| Non-protein coding RNA 117 [Mus musculus]
gi|148691856|gb|EDL23803.1| RIKEN cDNA 2010316F05, isoform CRA_a [Mus musculus]
Length = 169
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
+L RL L I EHP V T+E ++ ++ G SKNLFLKDKK + +++V+ L D
Sbjct: 9 ELEQRLGALAIRTEVVEHPEVFTIEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHD 68
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF- 124
++++ L ++LG+G G LR A E MLE LKV G TP +L + DV +LD F
Sbjct: 69 RQINLNDLGKQLGVGSGNLRFADETAMLEKLKVGQGCATPLSLFCDDG-DVKFVLDSAFL 127
Query: 125 -KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ D F+K+ G DP ++ +
Sbjct: 128 EGGHEKVYFHPMTNAATMGLSPEDFLIFVKATGHDPIILNFD 169
>gi|90421047|ref|ZP_01228950.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334682|gb|EAS48459.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 172
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+D L+A L L I + HP + TVE G I GG +KNLFLKDKK ++V A
Sbjct: 4 RDALMAYLDGLGIATTTVAHPPLHTVEESQALRGTIAGGHTKNLFLKDKKGTIFLVVAEE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
VD+K L +R+G G L A E M +L V GSVT F +VN+ V L+LD+G
Sbjct: 64 SRTVDLKSLHKRIG-ASGRLSFASAEQMRALLGVEPGSVTAFGVVNDRDGTVRLVLDEGL 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HP++N+ + ++ T DL F +S G +P + LEA
Sbjct: 123 LMHDMVNCHPMTNEATTTIATADLMAFFQSTGHEPLVIGLEA 164
>gi|144898748|emb|CAM75612.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 166
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D L A L+I + + H TVE + G+I G KNLFLKD K R ++V
Sbjct: 1 MPASPDDLFACFDRLEIAVTTHHHAPAFTVEQGNEVWGDIPGIHCKNLFLKDGKGRLWLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A A +VD+K L +R+G + L E + ++L V GSVTPFAL+N++ R V +L
Sbjct: 61 VAPAHVRVDLKSLPKRIGAAR--LSFGSGELLEQVLGVEAGSVTPFALINDAERRVTPVL 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
D AQ +HPL N M+ ++ ++ L +FL G V+L+ N
Sbjct: 119 DAWMMAQPLLNYHPLRNHMTTTITSDGLRRFLTHTGHAAEVVNLQEN 165
>gi|452966478|gb|EME71488.1| hypothetical protein H261_02466 [Magnetospirillum sp. SO-1]
Length = 163
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A + D L A L I + H TVE + G+I G KNLFLKD K ++V
Sbjct: 3 AATPDDLFALFDRLDIRAVTHRHDPAFTVEEGHRVWGSIPGVHCKNLFLKDGKGWLWLVV 62
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A AD ++D+K L R+G + L + E+L + GSVTPFA++N+ V ++LD
Sbjct: 63 APADRRIDLKTLPGRIGSAR--LSFGSAALLAEVLGIEPGSVTPFAVINDPGHRVTVVLD 120
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
G A+ER +HPL NDM+ +L+ +L +FL G P V+L
Sbjct: 121 AGMMAEERINYHPLRNDMTSTLSPAELLRFLGHTGHMPLLVEL 163
>gi|167648546|ref|YP_001686209.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Caulobacter sp. K31]
gi|167350976|gb|ABZ73711.1| YbaK/prolyl-tRNA synthetase associated region [Caulobacter sp. K31]
Length = 168
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L A L + S +HP V VE + + GG +KNLFLKD K + +++SAL
Sbjct: 3 TRADLFALLDAHGVAHSTLDHPPVFRVEEGLEIKAALPGGHTKNLFLKDAKGQLWLISAL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T +D+K L +G G+ L PE M+E L V GSVT F L+N++ R V +LD
Sbjct: 63 GETVIDLKRLHTVIGSGR--LSFGPEALMVETLGVTPGSVTAFGLINDTGRRVRFVLDAA 120
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
+ FHPL+ND + +++ + +FL ++G +P VD A V
Sbjct: 121 LAKADPVNFHPLANDATTAVSQDGFRRFLAALGVEPMVVDFSAMAVV 167
>gi|402847635|ref|ZP_10895910.1| aminoacyl-tRNA editing enzymes YbaK, ProX [Rhodovulum sp. PH10]
gi|402502042|gb|EJW13679.1| aminoacyl-tRNA editing enzymes YbaK, ProX [Rhodovulum sp. PH10]
Length = 230
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + D L A L L + HP + TVE G I GG +KNLFLKDK+ ++V
Sbjct: 44 MPATPDDLFAFLDRLSVVHQTVRHPPLFTVEDSRALRGEIPGGHTKNLFLKDKRGTLFLV 103
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+A D +D+K L + L G+ A E M E+L + G+VTPFA +N++A V +++
Sbjct: 104 TAPEDAAIDLKGLHRLLDAGRFSFGSA--ELMQEVLGITPGAVTPFAAINDTAGRVTVVI 161
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPP 176
D+ E HPL N M+ S+ +DL +FL++ G +P + A PP
Sbjct: 162 DEALLVHETINCHPLVNTMTTSIGRDDLLRFLRATGHEPRIAAVSEPAADASSDPP 217
>gi|295687562|ref|YP_003591255.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Caulobacter segnis ATCC 21756]
gi|295429465|gb|ADG08637.1| YbaK/prolyl-tRNA synthetase associated region [Caulobacter segnis
ATCC 21756]
Length = 167
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L A ++ +HP V VE + + GG +KNLFLKD K + +++SAL
Sbjct: 3 TRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAALPGGHTKNLFLKDAKGQLWLISAL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T++D+K L +G G+ L PE MLE L V GSVT F L+N++ + V +LDK
Sbjct: 63 GETRIDLKKLHHVIGSGR--LSFGPEAMMLETLGVTPGSVTAFGLINDTDKRVRFVLDKA 120
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
+ FHPL ND + +++ KFL+++G P VD EA +
Sbjct: 121 LADSDPVNFHPLKNDATTAVSQAGFRKFLEALGIAPMIVDFEAMAVI 167
>gi|389878989|ref|YP_006372554.1| Ala-tRNA(Pro) hydrolase [Tistrella mobilis KA081020-065]
gi|388529773|gb|AFK54970.1| Ala-tRNA(Pro) hydrolase [Tistrella mobilis KA081020-065]
Length = 166
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ L ARL L I Y+H V TVE G++ G KNLFLKDK+ ++
Sbjct: 1 MPATRADLFARLDALGIAHETYDHAPVFTVEEAEAETGHVPGLHVKNLFLKDKRGDLWLA 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ AD +VD+K L LG G+ + ++E+L V GSVTPFAL+N+ R V L
Sbjct: 61 TVAADRRVDLKHLQALLGAGR--FSFGKPDLLMEVLGVTPGSVTPFALINDPDRRVVFAL 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
D+ ER HPL ND S + L +F+ S G D VDL+
Sbjct: 119 DRRVAEAERINAHPLFNDASTVVTGAGLKRFVSSFGHDVRIVDLD 163
>gi|254502237|ref|ZP_05114388.1| YbaK / prolyl-tRNA synthetases associated domain, putative
[Labrenzia alexandrii DFL-11]
gi|222438308|gb|EEE44987.1| YbaK / prolyl-tRNA synthetases associated domain, putative
[Labrenzia alexandrii DFL-11]
Length = 175
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S+D+L+ +DL I + +H V TV I GG +KNLF+KDKK R +++
Sbjct: 1 MPASRDELMGFFQDLGISVTTVDHDPVFTVAESGDLHDRIPGGHTKNLFVKDKKGRLFLI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALL 119
+ L D ++D+K + Q +G +G + + ++E+L V GSVTPF+L+N+ A+ V +
Sbjct: 61 TTLHDAEIDLKKVHQVIG-AQGRVSFGNADLLMEVLGVEPGSVTPFSLINDREAQRVTPV 119
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
D A + +HPL ND + ++ ++DL KF K+ G +P + + A
Sbjct: 120 FDAAMMAHDVLNYHPLKNDATTAITSSDLLKFAKACGHEPQVLAVSA 166
>gi|354483690|ref|XP_003504025.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Cricetulus griseus]
gi|344251749|gb|EGW07853.1| UPF0566 protein [Cricetulus griseus]
Length = 169
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP V T+E ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLGALAIRTEIVEHPEVFTIEEMMPHIQHLKGAHSKNLFLKDKKEKHYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L ++LG+G G LR A E M E LKV G TP AL + DV +LD F
Sbjct: 73 LNDLGKQLGVGSGNLRFADETAMQEKLKVGPGCATPLALFCDDG-DVTFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ D F+K+ G DP ++ +
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLVFVKATGHDPIILNFD 169
>gi|47169450|pdb|1VJF|A Chain A, Crystal Structure Of A Putative Dna-Binding Protein
(Cc_0111) From Caulobacter Crescentus Cb15 At 1.62 A
Resolution
Length = 180
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L A ++ +HP V VE + GG +KNLFLKD K + +++SAL
Sbjct: 15 TRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAXPGGHTKNLFLKDAKGQLWLISAL 74
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T +D+K L +G G+ L P+E LE L V GSVT F L+N++ + V +LDK
Sbjct: 75 GETTIDLKKLHHVIGSGR--LSFGPQEXXLETLGVTPGSVTAFGLINDTEKRVRFVLDKA 132
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
+ FHPL ND + +++ L +FL ++G +P VD A VG
Sbjct: 133 LADSDPVNFHPLKNDATTAVSQAGLRRFLAALGVEPXIVDFAAXEVVG 180
>gi|254563054|ref|YP_003070149.1| hypothetical protein METDI4706 [Methylobacterium extorquens DM4]
gi|254270332|emb|CAX26328.1| conserved hypothethical protein [Methylobacterium extorquens DM4]
Length = 169
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D LL RL++ I + YEH AV+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLSPDDLLTRLRERDIAYKLYEHEAVLTVEAMMAICGDIAGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A + + E L V G+V+P A +N + V + L
Sbjct: 61 TLQHDAQVDLKAFRAVLG-ARGGLSFASPDALREQLGVESGAVSPLAALNAAPGSVRVFL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A+ R HPL + ++SL DL + L++ G +P V L
Sbjct: 120 QDSLLAETRINIHPLVSTRTLSLVPADLVEVLRAEGHEPTAVAL 163
>gi|354499771|ref|XP_003511979.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Cricetulus griseus]
Length = 169
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
RL L I EHP + T+E ++ ++ G SKNLFLKDKK + +++V+ L D +++
Sbjct: 13 RLSALDIHTEVLEHPELFTIEEMMPHIQHLKGAHSKNLFLKDKKEKHYWLVTVLHDRQIN 72
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQ 127
+ L ++LG+G G LR A E M E LKV G TP AL + DV +LD F
Sbjct: 73 LNDLGKQLGVGSGNLRFADETAMQEKLKVGPGCATPLALFCDDG-DVTFVLDSAFLEGGH 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
E+ +FHP++N ++ L+ D F+K+ G DP ++ +
Sbjct: 132 EKVYFHPMTNAATMGLSPEDFLVFVKATGHDPIILNFD 169
>gi|163853144|ref|YP_001641187.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium extorquens PA1]
gi|163664749|gb|ABY32116.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
extorquens PA1]
Length = 169
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D LL RL++ I + YEH AV+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLSPDDLLTRLRERGIAYKLYEHEAVLTVEAMMAICGDIAGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A + + E L V G+V+P A +N + V + L
Sbjct: 61 TLQHDAQVDLKAFRAVLG-ARGGLSFASPDALREQLGVESGAVSPLAALNAAPGSVRVFL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A+ R HPL + ++SL DL + L++ G +P V L
Sbjct: 120 QDSLLAETRVNIHPLVSTRTLSLVPADLVEVLRAEGHEPTAVAL 163
>gi|397613521|gb|EJK62265.1| hypothetical protein THAOC_17129 [Thalassiosira oceanica]
Length = 238
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGG--GLSKNLFLKDKKHRFYIVSALAD 65
++++L L I + Y H MT + V G G +KNLFL+DKKH ++V+A D
Sbjct: 21 IVSKLDSLSIPHTTYAHTLCMTADELVANVPLAGDNEGHTKNLFLRDKKHGLFLVTAATD 80
Query: 66 TKVDMKVLSQRLGL-GKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
V+ K L + LGL GK LRMA E +LE L G V P ++ N + +DV L++D+
Sbjct: 81 AAVNTKELGKMLGLQGKTNLRMADEAILLEKLGCRKGCVGPLSMANNAEKDVTLVVDESL 140
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGK--DQPP 176
R HPL ND S S+ DL KFLK IG +P ++ GK D+PP
Sbjct: 141 LKLSRVHSHPLRNDASTSMAPADLMKFLKEIGVEPTLLEF------GKKGDEPP 188
>gi|240140564|ref|YP_002965044.1| hypothetical protein MexAM1_META1p4114 [Methylobacterium extorquens
AM1]
gi|418064089|ref|ZP_12701657.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
extorquens DSM 13060]
gi|240010541|gb|ACS41767.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373553473|gb|EHP80067.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
extorquens DSM 13060]
Length = 169
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D LL RL++ I + YEH AV+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLSPDDLLTRLRERGIAYKLYEHEAVLTVEAMMAICGDIAGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A + + E L V G+V+P A +N + V + L
Sbjct: 61 TLQHDAQVDLKAFRAVLG-ARGGLSFASPDALREQLGVESGAVSPLAALNAAPGSVRVFL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A+ R HPL + ++SL DL + L++ G +P V L
Sbjct: 120 QDSLLAETRVNIHPLVSTRTLSLVPADLVEVLRAEGHEPTSVAL 163
>gi|298293378|ref|YP_003695317.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Starkeya novella DSM 506]
gi|296929889|gb|ADH90698.1| YbaK/prolyl-tRNA synthetase associated region [Starkeya novella DSM
506]
Length = 173
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + LLARL +L IE + EHP + TVE G+I GG +KNLFLKDKK ++V
Sbjct: 1 MPLTTQDLLARLAELGIETTTVEHPPLFTVEDSQALRGDIPGGHTKNLFLKDKKGNIFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+T+VD+K L Q LG L E + E+L V G+VT F VN++ V ++L
Sbjct: 61 VVEEETRVDLKSLHQPLG-AASRLSFGSAELLEEVLGVKPGAVTAFGPVNDTEGRVTVVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D E HPL N + ++ + DL +FL++ G +P
Sbjct: 120 DAELMTHETVNCHPLVNTATTAIRSADLIRFLRTTGHEP 158
>gi|156381920|ref|XP_001632303.1| predicted protein [Nematostella vectensis]
gi|156219357|gb|EDO40240.1| predicted protein [Nematostella vectensis]
Length = 170
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 6/170 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL-SKNLFLKDKKHR-FY 58
M + +L+ L+ L+I+ EHPAV TVEA Y+ +I G+ SKNLFLKDKK + +
Sbjct: 1 MTGGRKELMEFLEKLEIKSHTVEHPAVFTVEAMMPYLKDIPNGIVSKNLFLKDKKKKGLW 60
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+VS A+ +V + L++++G GG R A E M+E L V G T F+L+N+ +DV
Sbjct: 61 LVSCSANREVKLNDLAKKVG-ASGGFRFADEAIMVEKLGVGQGCATGFSLLNDRNQDVKF 119
Query: 119 LLDKGF---KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+LD F + +FHP+ N + ++ D KF K+ G DP V+ +
Sbjct: 120 ILDAEFTDYSKHDWVYFHPMENTATTGVSPEDFIKFAKATGHDPIVVNFD 169
>gi|218531949|ref|YP_002422765.1| YbaK/prolyl-tRNA synthetase associated protein [Methylobacterium
extorquens CM4]
gi|218524252|gb|ACK84837.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
extorquens CM4]
Length = 169
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D LL RL++ I + YEH AV+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLSPDDLLTRLRERGIAYKLYEHEAVLTVEAMMAICGDIAGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A + + E L V G+V+P A +N + V + L
Sbjct: 61 TLQHDAQVDLKAFRAVLG-ARGGLSFASPDALREQLGVESGAVSPLAALNAAPGSVRVFL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A+ R HPL + ++SL DL L++ G +P V L
Sbjct: 120 QDSLLAETRINIHPLVSTRTLSLVPADLVAILRAEGHEPTAVAL 163
>gi|338741603|ref|YP_004678565.1| PrdX-deacylase domain-containing protein 1 [Hyphomicrobium sp. MC1]
gi|337762166|emb|CCB68001.1| PrdX-deacylase domain-containing protein 1 [Hyphomicrobium sp. MC1]
Length = 165
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ QL L DL IE HPAV TV K + G +KNLFL+D K ++V
Sbjct: 1 MPVTRQQLFQTLADLGIETETIGHPAVFTVAESDKVEIALPGAHTKNLFLRDDKGALFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A +T+VD+K LS+RLG G+ E ++E L V GSVT FA +N++ V ++
Sbjct: 61 IANTETRVDLKALSKRLGAGR--FSFGKPELLMETLSVTPGSVTAFATINDTGNRVKIIF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
D+ A HPL N + ++ +DL +F++S G +P + L A+
Sbjct: 119 DEALMAAPSVNCHPLENTATTNIARDDLLRFIRSTGHEPQVMVLTAS 165
>gi|407772454|ref|ZP_11119756.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Thalassospira profundimaris WP0211]
gi|407284407|gb|EKF09923.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Thalassospira profundimaris WP0211]
Length = 172
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L L L IE +EH + TVE G++ G SKNLF+KDKK ++V A +T+
Sbjct: 8 LFDHLAKLGIETKTHEHEPLFTVEDSQALRGDLPGLHSKNLFVKDKKGALWLVVAEEETE 67
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+ M L +RLG + L + ++E L + GSVTPFAL+N+ R V L LD
Sbjct: 68 IRMNHLHKRLGCAR--LSFGKPQLLIETLGIKPGSVTPFALLNDRDRKVNLALDAKLANG 125
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQ 174
+ FHPL ND + ++++ DL F+ S+G + +D +A PA D+
Sbjct: 126 DLLNFHPLRNDRTTTISSADLLTFIGSLGYEAMIIDFDAEPAAADDK 172
>gi|432902866|ref|XP_004077050.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like isoform 2 [Oryzias latipes]
Length = 193
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 25 PAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGG 83
P V TVE ++ ++ G ++KNLFLKDKK + ++VSA D +V++ L+++LG+G G
Sbjct: 50 PQVFTVEEMMPHLQDVSGAVTKNLFLKDKKKKGLWLVSARHDHQVNLNELAKKLGVGSGN 109
Query: 84 LRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSI 141
LR A E MLE LKV G T AL+ + + V +LD+ ER +FHP++N ++
Sbjct: 110 LRFADEAAMLEKLKVGQGCATALALLFDKDQSVKFILDRDLVEGGHERIYFHPMTNSATM 169
Query: 142 SLNTNDLDKFLKSIGRDP 159
L +DL +FLK G +P
Sbjct: 170 GLRPDDLLRFLKETGHEP 187
>gi|334145202|ref|YP_004538412.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Novosphingobium sp. PP1Y]
gi|333937086|emb|CCA90445.1| YbaK/prolyl-tRNA synthetase associated region [Novosphingobium sp.
PP1Y]
Length = 196
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S+ LLA L+ + F+ ++H AV TVE A+ G+I G +KNLFLKDK R+++++
Sbjct: 34 SEHALLADLEGAGVSFTVHDHVAVATVEDSAEVTGHIPGYHTKNLFLKDKAGRYWLITMP 93
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ + D+K+++ RLG G+ L M E+L V G+VTP A N+ A V ++LD
Sbjct: 94 GEERADLKLIASRLGAGR--LSFGKPGAMKELLDVIPGAVTPLAAFNDRAGLVTVVLDAA 151
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
F +E HPL N ++SL T DL L+ P + L+
Sbjct: 152 FAPEETINVHPLRNTATLSLRTADLVAALERWDHPPIVLSLQ 193
>gi|188583209|ref|YP_001926654.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium populi BJ001]
gi|179346707|gb|ACB82119.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
populi BJ001]
Length = 169
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S D LL RL++ I + YEH AV+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLSPDDLLTRLRERGIAYKLYEHEAVLTVEAMMAVCGDIAGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A E + E L V G+V+P A +N + V + +
Sbjct: 61 TLQHDAQVDLKAFRAVLG-ARGGLSFASPEALREHLGVESGAVSPLAALNAAPGSVRVFI 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ R HPL + ++SL DL + L++ G +P V L
Sbjct: 120 QDSLLDETRVNIHPLVSTRTLSLVPADLMQALRAEGHEPTPVAL 163
>gi|449269241|gb|EMC80035.1| UPF0566 protein, partial [Columba livia]
Length = 158
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Query: 27 VMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLR 85
V TVE +V ++ GG SKNLFLKDKK + F++V+ L D +V++ L+++LG+G G LR
Sbjct: 14 VFTVEEMMPHVQHMKGGHSKNLFLKDKKKKGFWLVTVLHDRQVNLNDLAKKLGVGSGKLR 73
Query: 86 MAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISL 143
A E + E L+V G TP AL + A DV L+LD E+ +FHP++N ++ L
Sbjct: 74 FAEETALREKLRVGQGCATPLALFCD-AGDVTLVLDAALLEGGHEKVYFHPMTNSATMGL 132
Query: 144 NTNDLDKFLKSIGRDPAYVDLEAN 167
+ +D KF++S G DP + + +
Sbjct: 133 SPDDFLKFVRSTGHDPIIIHFDED 156
>gi|163796437|ref|ZP_02190397.1| YbaK/prolyl-tRNA synthetase associated region [alpha
proteobacterium BAL199]
gi|159178287|gb|EDP62831.1| YbaK/prolyl-tRNA synthetase associated region [alpha
proteobacterium BAL199]
Length = 180
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S + LLA L L + + +++HP + TV+ G++ GG KNLFL+D+K ++V L
Sbjct: 16 SPETLLAHLDGLGVGYVRHDHPPLFTVDDSKALRGDLPGGHCKNLFLRDRKGAMWLVVCL 75
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMA--PEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
D ++D+K L + L GG+R++ + ++ +L V G+V+PFAL+N++ V ++LD
Sbjct: 76 EDRQIDLKALGELL----GGVRLSFGSADRLMRVLGVLPGAVSPFALINDTEVAVEVILD 131
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
K +HPL N +I+++ DL +FL++ G P ++L+ PA G
Sbjct: 132 KAMLEHRPLNYHPLVNTTTIAVSPEDLIRFLEAGGHTPRVLNLD--PASG 179
>gi|291236079|ref|XP_002737969.1| PREDICTED: PrdX-deacylase domain 1-like [Saccoglossus kowalevskii]
Length = 180
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
K++++ LK + +EHP V TVE YVG++ G +KN FLKDKK + ++++
Sbjct: 18 GKEEIIDELKRQGYDIEVFEHPEVFTVETMMPYVGHLPGVHTKNFFLKDKKKKGLWLMTV 77
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +V++ +S+ +G GGLR A E ML+ + V G VTP AL N+ +DV +LD
Sbjct: 78 KHDREVNLGKISKEVG-APGGLRFADESIMLDKIGVGQGCVTPIALYNDKNKDVKFILDS 136
Query: 123 GF--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER + HP+ N +I + D F++S G P ++
Sbjct: 137 DIINGGHERMYCHPMVNSATIGIKPEDFKSFIESTGHSPILLNF 180
>gi|395829815|ref|XP_003788036.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Otolemur garnettii]
Length = 203
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
Query: 27 VMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLR 85
V TVE +V ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR
Sbjct: 60 VFTVEEMMPHVQHLKGAHSKNLFLKDKKKKSYWLVTVLHDRQINLNELAKQLGVGSGNLR 119
Query: 86 MAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISL 143
A E++MLE LKV G TP AL + +V +LD F E+ +FHP++N ++ L
Sbjct: 120 FADEKSMLEKLKVGQGCATPLALFCDDG-NVKFVLDSAFLEGGHEKVYFHPMTNAATMGL 178
Query: 144 NTNDLDKFLKSIGRDPAYVDLEAN 167
+ D F+K G DP + + N
Sbjct: 179 SPEDFLTFVKETGHDPIILHFDKN 202
>gi|83945810|ref|ZP_00958153.1| DNA-binding protein, putative [Oceanicaulis sp. HTCC2633]
gi|83850813|gb|EAP88675.1| DNA-binding protein, putative [Oceanicaulis alexandrii HTCC2633]
Length = 173
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S++ LL L L I ++HP + TVE ++ GG +KNLFLKDKK ++SAL
Sbjct: 13 SREDLLRFLDGLGIAHETHDHPPIFTVEEGESLKLDMPGGHTKNLFLKDKKGALILISAL 72
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
T++ + L LG G+ L E + + L V GSVT FAL+N+ V +LD+
Sbjct: 73 QSTRIALNQLHHSLGCGR--LSFGKAELLEDKLGVTPGSVTAFALLNDHDHQVRFILDEA 130
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A + FHPL ND + ++ + DL +F++++GR P V L+
Sbjct: 131 LMAHDIVNFHPLKNDATTAIRSADLLRFVEALGRAPEIVKLDG 173
>gi|406708181|ref|YP_006758533.1| proline--tRNA ligase editing protein [alpha proteobacterium HIMB59]
gi|406653957|gb|AFS49356.1| proline--tRNA ligase editing protein [alpha proteobacterium HIMB59]
Length = 173
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFY 58
M + + L+ L +IE+ +EH A TVE +Q K ++ G +KNLFL+DKK F+
Sbjct: 2 MKFEAENFLSHLDSNKIEYKLFEHAAFFTVEESSQLKTDLDMQGAHTKNLFLRDKKRNFF 61
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
++S L +VD+K + + +G L E + E L V GSV+P++L+N + +DV
Sbjct: 62 LISCLDTQEVDLKEIKNYIS-AQGNLSFGSPEYLDEKLGVKPGSVSPYSLINNTDKDVNF 120
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
LDK + C FHPL N +I + TND FLKS+ +
Sbjct: 121 FLDKEILDFDLCNFHPLINTKTIQMKTNDCVDFLKSLVK 159
>gi|429328696|gb|AFZ80456.1| prolyl-tRNA synthetase, putative [Babesia equi]
Length = 690
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
D+L L++L + + +HP V+TV+ + + + +N+F+ D R Y++SAL
Sbjct: 8 DKLYKFLQNLGLRYRVIKHPNVVTVKDMLEEPTLAAVKDDFIRNIFMLDSSKRCYLISAL 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
DT+V+ KVL +RL + K L M E+ M IL V GS++PF+L+N++ V LL D
Sbjct: 68 HDTEVNWKVLRKRLNVNK--LHMGDEKDMEHILGVSRGSLSPFSLMNDTENKVRLLFDSR 125
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQP 175
K ++ HPL N+ SI ++ D+ KFL+ + +P ++ + A +P
Sbjct: 126 LKERKDIVAHPLHNEESIVMSLEDMTKFLREVNHEPTFMPMNEQDAAALGEP 177
>gi|299472673|emb|CBN78325.1| Proline--tRNA ligase [Ectocarpus siliculosus]
Length = 906
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
L +LK+L IE + +EH MTV Q + + G +KNLFLKDKK +V+ D
Sbjct: 194 LDKLKELGIEGALFEHHRAMTVPEQEMALRGVSGDKTKNLFLKDKKAGLILVTVRHDRPT 253
Query: 69 DMKVLSQRLGL-GKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
DMK L++ LG GK LR A T+ +L V G+V+P A+VN+ L +DK
Sbjct: 254 DMKTLAKLLGFPGKVSLRFADAATLDSVLGVVQGAVSPLAVVNDVEGVARLAMDKSVMEA 313
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
E HPL ND S+ + DL K++ + G P +D A
Sbjct: 314 EEVLVHPLRNDRSVRIKAADLVKYVTACGHAPTVLDFSA 352
>gi|357026972|ref|ZP_09089063.1| hypothetical protein MEA186_19500 [Mesorhizobium amorphae
CCNWGS0123]
gi|355541118|gb|EHH10303.1| hypothetical protein MEA186_19500 [Mesorhizobium amorphae
CCNWGS0123]
Length = 165
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ +LLA L DL I S HP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTEAELLAFLADLGITVSTRRHPPLYTVADSQALRGEIPGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
S + VD+K + Q +G + E ++E+L V G+VT F L+N++ R V ++L
Sbjct: 61 SVGEEAVVDLKQIHQLIG-AASRVSFGKPEMLMELLGVTPGAVTVFGLINDTGRRVKVVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
D+ + HPL+N+ + S+ DL KF+++ G D + + A
Sbjct: 120 DQELMGHDVINAHPLTNEATTSIAAADLVKFVEATGHDAVILKVSA 165
>gi|47208370|emb|CAF96660.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1133
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
+ +L L L I S EHP V TVE ++ + G ++KNL LKDKK + ++VSA
Sbjct: 6 RAELEKYLDALNIRTSCVEHPPVFTVEEMMPHLQGLSGAVTKNLELKDKKKKSLWLVSAR 65
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +V++ L+++LG+G G LR + E TMLE LKV G T AL+ + + V L+LD+
Sbjct: 66 HDRQVNLNHLAKKLGVGSGNLRFSDEATMLETLKVGQGCATALALLFDKDQSVRLVLDQD 125
Query: 124 FKAQER--CFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ +FHP++N ++ L +DL +FL+ G +P
Sbjct: 126 LVQGDHNLVYFHPMTNAATMGLRPDDLLRFLRETGHEP 163
>gi|300024969|ref|YP_003757580.1| YbaK/prolyl-tRNA synthetase associated protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526790|gb|ADJ25259.1| YbaK/prolyl-tRNA synthetase associated region [Hyphomicrobium
denitrificans ATCC 51888]
Length = 179
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++D+LL RL DL I + +HPAV TV + G +KNLFLKD + R +V
Sbjct: 9 MPLTRDELLLRLNDLDIRTTTIDHPAVFTVAESETVEIPLPGAHTKNLFLKDDRSRLVLV 68
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A + T VD+K L +RLG+G+ + ++ L V GSVT FA+ N+ V +++
Sbjct: 69 IAKSATVVDLKGLGKRLGMGR--FSFGKPDLLMCTLGVTPGSVTAFAVANDVEGRVTVVV 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGK 172
D+ + HPL N + ++ DL +F++S G +P + L A AV +
Sbjct: 127 DETLMEHDSVNCHPLENTATTNIACEDLLRFIRSTGHEPRVMALTAADAVAR 178
>gi|114706372|ref|ZP_01439274.1| hypothetical protein FP2506_01270 [Fulvimarina pelagi HTCC2506]
gi|114538233|gb|EAU41355.1| hypothetical protein FP2506_01270 [Fulvimarina pelagi HTCC2506]
Length = 204
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
MA ++D L+A I + +HPA+ TVE G I G +KNLFLKDKK + ++V
Sbjct: 28 MATTRDDLMAFFARNDIVVTTVDHPALFTVEESRSVRGEIPGAHTKNLFLKDKKGKMFLV 87
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A DT+V +K L +R+G G G L A + M E+L V GSVT F ++N+ V ++L
Sbjct: 88 VAEEDTEVALKSLHRRIG-GSGRLSFASADQMQELLGVEPGSVTAFGVINDCEHVVNVVL 146
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
D+ A + HPL+N + SL DL +F + G
Sbjct: 147 DERLGAYDIVNGHPLTNTATTSLRYEDLLRFFRLTG 182
>gi|114571476|ref|YP_758156.1| Ala-tRNA(Pro) hydrolase [Maricaulis maris MCS10]
gi|114341938|gb|ABI67218.1| Ala-tRNA(Pro) hydrolase [Maricaulis maris MCS10]
Length = 173
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + QLL RL L I ++H + TV ++ GG +KNLFL+DKK +V
Sbjct: 1 MMTGRTQLLERLDALGIAHQTHDHAPIFTVAEGEGIKQSMPGGHTKNLFLRDKKGHLILV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
SAL +T V + L LG G+ L E + E L V GSV+ FAL+N+ A V +L
Sbjct: 61 SALGETAVPINKLHPVLGCGR--LSFGKPELLFEALGVRPGSVSAFALINDPAARVQFVL 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D E FHPLSND + ++ + DL +F + G +P +D
Sbjct: 119 DAALMKHELVNFHPLSNDATTAVRSVDLIRFARETGHEPLIIDF 162
>gi|116254298|ref|YP_770136.1| hypothetical protein RL4572 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258946|emb|CAK10055.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 169
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D+L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TRDELFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G G G + E ++E L V GSVT F +N++A +V +LD
Sbjct: 68 ENAAVDLKQVHNAIG-GSGRVSFGRPEKLMEYLGVAPGSVTAFGAINDTAENVTFVLDAE 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A E HPLSND + S+ ++DL +F+++ G P
Sbjct: 127 LMAHEIVNCHPLSNDATTSIASSDLIRFMEATGHKP 162
>gi|332186626|ref|ZP_08388369.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Sphingomonas sp. S17]
gi|332013278|gb|EGI55340.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Sphingomonas sp. S17]
Length = 163
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++D++ A + I F + EHPAV TVE A + G +KNLFLKDK+ RF++V
Sbjct: 1 MMMTEDEIYAAFQREGIAFEKLEHPAVFTVEESADIHAALPGAHTKNLFLKDKQKRFWLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
D + D+K +++RL GK A E M +L+V G+VTP A+ N + DV L+
Sbjct: 61 VLPYDRRADLKGMAERLEAGKFSFGSA--EDMERLLQVTPGAVTPLAIANVTPGDVRLVF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D+ F++ HPL N +++L L +L+ +G D V L
Sbjct: 119 DESFRSDAPIAVHPLRNTATVALPFVPLKVWLEKLGHDVRVVTL 162
>gi|348682080|gb|EGZ21896.1| hypothetical protein PHYSODRAFT_557759 [Phytophthora sojae]
Length = 711
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
++ A L+ L I + ++EH + T E +G++ G +KNL KDKK ++V+A T
Sbjct: 12 EVSAALQALSISYEKHEHRELPTTEDVIAELGHLAGLSTKNLVFKDKKEGLFLVTAAPTT 71
Query: 67 KVDMKVLSQRL---GLG--KGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
VD K L RL G+G K LR A EE + E LKV GSV+P +++++ +V L+LD
Sbjct: 72 VVDTKKLGARLHAAGIGGKKWNLRFATEEVLAESLKVTKGSVSPLCVMHDAKNEVRLVLD 131
Query: 122 KGF--KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K AQ C HPL ND + SL + DL KF+K +P VD
Sbjct: 132 KALVDAAQVNC--HPLRNDQTYSLKSEDLLKFVKHYNHEPIVVDF 174
>gi|325193707|emb|CCA27955.1| prolyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 697
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S+ ++A L+ L + + ++EHP + TV+ K +G++ G L+KNL KDKK ++V+
Sbjct: 2 SEKAVIAALERLSLTYERHEHPPLPTVDDLVKELGHLDGFLTKNLVFKDKKEGVFLVTTA 61
Query: 64 ADTKVDMKVLSQRL---GLG-KGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
A TKVD K+L Q+L G G K LR A E+ + +LKV GSV+P +++++ + V +
Sbjct: 62 ASTKVDTKLLGQKLSAVGTGTKYNLRFAGEDVLETVLKVQKGSVSPLCVMHDTTQQVRFV 121
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+DK HPL ND++ SL+ L F +P +D +
Sbjct: 122 MDKLLVETSTIHCHPLRNDITFSLSPKALLTFAAEFKHEPIIIDFD 167
>gi|156083641|ref|XP_001609304.1| prolyl-tRNA synthetase [Babesia bovis T2Bo]
gi|154796555|gb|EDO05736.1| prolyl-tRNA synthetase, putative [Babesia bovis]
Length = 705
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG---LSKNLFLKDKKHRFYIVSA 62
++L + L + +++Y HP ++ V+ Q+ + + G + KNL+LKD+ R+Y++ A
Sbjct: 25 EELYKMFQRLGVMYTEYVHPPLIAVK-QSLEIPDFKGKYDIIVKNLWLKDESKRYYLLVA 83
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L DTK+D K LS+++ + LRM PEE M ++ + G + PFA+VN+ +V +LLD+
Sbjct: 84 LHDTKIDFKYLSKQVKVKH--LRMGPEECMEAMVGMKRGHLNPFAVVNDKNNEVKVLLDE 141
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
K Q+ H L N S+ ++T DL +FL+ +P +V
Sbjct: 142 RIKEQKEIMAHALHNTTSVCISTEDLLRFLRENNHEPTFV 181
>gi|46202006|ref|ZP_00053959.2| COG3760: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 163
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ D L A L I + H A TVE + G+I G KNLFLKD K R ++V A
Sbjct: 5 TPDDLFALFDRLDIRAVTHHHDAAFTVEEGHRVWGSIPGTHCKNLFLKDGKGRLWLVVAP 64
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
A+ ++D+K L +++G + L + E+L + GSVTPFALVN+ V+++LD
Sbjct: 65 AERRIDLKSLPEKIGSAR--LSFGSAALLTEVLGIEPGSVTPFALVNDREYRVSVVLDAE 122
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
AQE +HPL N M+ +L +L +FL+ G
Sbjct: 123 MMAQELINYHPLRNTMTTTLTPAELVRFLEHTGH 156
>gi|158422792|ref|YP_001524084.1| hypothetical protein AZC_1168 [Azorhizobium caulinodans ORS 571]
gi|158329681|dbj|BAF87166.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 175
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + D LL L + IE YEHP V TV G I G +KNLFL+D K +++V
Sbjct: 1 MPLTPDDLLRFLSENGIEARTYEHPPVFTVAESQALRGEIPGTNTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ +T VD+K L ++G + GL A E + E L V GSV+ AL+N+ A V + +
Sbjct: 61 TLEENTAVDLKGLRGKIG-ARSGLSFASPEALYEHLGVRPGSVSLLALINDKACQVRVFV 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+ G ER HPL+ND + SL+ DL FL + G + V L+
Sbjct: 120 EAGLLDAERINCHPLTNDKTTSLSAQDLRHFLAATGHTVSEVTLD 164
>gi|427428860|ref|ZP_18918898.1| aminoacyl-tRNA editing enzymes YbaK, ProX [Caenispirillum salinarum
AK4]
gi|425881287|gb|EKV29976.1| aminoacyl-tRNA editing enzymes YbaK, ProX [Caenispirillum salinarum
AK4]
Length = 165
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L+ L+DL IE +EH V TVE +I KNLFLKD K + ++V+
Sbjct: 6 TRDDLMRLLEDLGIEHETHEHEPVFTVEEGNGVWDDIPARHCKNLFLKDAKKQLWLVTCP 65
Query: 64 ADTKVDMKVL-----SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+D +D+K L S+RL GK L +LE+L V GSVTPF+L+N+ V +
Sbjct: 66 SDRDIDLKTLPGKIGSKRLSFGKPDL-------LLEVLGVTPGSVTPFSLMNDREARVTV 118
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+LD + RC +HPL N + + DL +F+ G + DL
Sbjct: 119 VLDAEMMTEPRCGYHPLDNAATTVIAPKDLRRFIAHTGHEVVEADL 164
>gi|407779569|ref|ZP_11126824.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Nitratireductor pacificus pht-3B]
gi|407298700|gb|EKF17837.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Nitratireductor pacificus pht-3B]
Length = 165
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S ++LL LK L IE + + H + TV G I GG +KNLFLKDKK RF++V
Sbjct: 1 MPKSPEELLDHLKALGIETATHRHEPLFTVADSQSLRGAIDGGHTKNLFLKDKKDRFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + ++G G + + ++E+L V GSVT F ++N+ V ++L
Sbjct: 61 TVEEDAVVDLKSIHHKIG-ASGRVSFGKPDKLMELLGVAPGSVTAFGVINDVGGQVTVVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D E HPL+N + S+ +DL +FL+S +P
Sbjct: 120 DAALLENETINAHPLTNAATTSIRRDDLLRFLESTRHEP 158
>gi|319780651|ref|YP_004140127.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166539|gb|ADV10077.1| YbaK/prolyl-tRNA synthetase associated region [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 165
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ +L A L +L I S HP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTEAELFAFLAELGIAASTRRHPPLYTVADSQALRGEIAGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E+L V G+VT F ++N++A V L+L
Sbjct: 61 TVGEDAVVDLKQIHQVIG-AASRVSFGKPEMLMELLGVTPGAVTVFGIINDTANRVKLVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
DK HPL+N+ + S+ +DL +F+++ G D A + + A
Sbjct: 120 DKDLMEHAVINGHPLTNEATTSIAASDLIRFVEATGHDAAILKVSA 165
>gi|13473736|ref|NP_105304.1| hypothetical protein mll4433 [Mesorhizobium loti MAFF303099]
gi|14024487|dbj|BAB51090.1| mll4433 [Mesorhizobium loti MAFF303099]
Length = 165
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ +L A L +L + S HP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTEAELFAFLAELGVAVSTKRHPPLYTVADSQALRGEIAGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E+L V G+VT F ++N++A V L+L
Sbjct: 61 TVGEDAVVDLKQIHQLIG-AASRVSFGKPEMLMELLGVSPGAVTVFGVINDTANRVKLVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
D+ A HPL+N+ + S+ DL +F+++ G D A + + A
Sbjct: 120 DQDLMAHAVINAHPLTNEATTSIAAADLIRFVEATGHDAAILKVSA 165
>gi|392380536|ref|YP_005029732.1| conserved protein of unknown function; YbaK/prolyl-tRNA synthetase
associated domain [Azospirillum brasilense Sp245]
gi|356875500|emb|CCC96236.1| conserved protein of unknown function; YbaK/prolyl-tRNA synthetase
associated domain [Azospirillum brasilense Sp245]
Length = 188
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
+ S +QLL L L I + HP + TVE G + GG KNLFLKDKK + ++V
Sbjct: 15 LPTSPEQLLEHLAALGIRTVTHRHPPLHTVEESKALRGALPGGHCKNLFLKDKKEQHWLV 74
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
AL D +V++ + +G + L A + + L V GSVTPFAL N+ R V ++L
Sbjct: 75 VALEDARVELNRFDKVIGSAR--LSFASADRLWRHLGVRPGSVTPFALFNDRERRVRVVL 132
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLA 179
+ A + +HPL ND + ++ DL +FL++ G +P V P D P LA
Sbjct: 133 QEQMLAHDPLNYHPLLNDRTTAIAAADLLRFLRAGGHEPLIVPFGEEPP---DSQPTLA 188
>gi|407768304|ref|ZP_11115683.1| hypothetical protein TH3_02455 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407289017|gb|EKF14494.1| hypothetical protein TH3_02455 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 169
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L L++L I+ S + H + TVE K G++ G SKNLF+KDKK ++V A +T+
Sbjct: 8 LFDYLENLGIKTSTHAHVPLFTVEDSQKLRGDLPGLHSKNLFVKDKKDALWLVVAEENTE 67
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+ M L + LG + L E +LE L V GSVTPFAL+N+ AR V LD
Sbjct: 68 IRMNHLHKTLGCAR--LSFGKPELLLETLGVIPGSVTPFALINDHARKVNFALDSKLAKG 125
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+ FHPL ND + ++ ++DL +F+ S+G + VD +
Sbjct: 126 DILNFHPLRNDRTTTIQSDDLLRFITSLGYEIRIVDFD 163
>gi|337265463|ref|YP_004609518.1| YbaK/prolyl-tRNA synthetase associated protein [Mesorhizobium
opportunistum WSM2075]
gi|336025773|gb|AEH85424.1| YbaK/prolyl-tRNA synthetase associated region [Mesorhizobium
opportunistum WSM2075]
Length = 165
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ +L A L +L I S HP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTEAELFAFLAELGIAVSTIRHPPLYTVADSQALRGEIAGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G G + E ++E+L V G+VT F ++N+ V L+L
Sbjct: 61 TVGEDAVVDLKQIHQLIG-AAGRVSFGKPEMLMELLGVAPGAVTVFGVINDRQNRVKLVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
DK HPL+N+ + S+ DL +F+++ G D A + + A
Sbjct: 120 DKDLMEHAVINAHPLTNEATTSIAAADLIRFVEATGHDAAILKVSA 165
>gi|304394326|ref|ZP_07376249.1| YbaK/prolyl-tRNA synthetase associated region protein [Ahrensia sp.
R2A130]
gi|303293766|gb|EFL88143.1| YbaK/prolyl-tRNA synthetase associated region protein [Ahrensia sp.
R2A130]
Length = 183
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
LLA L + H A+ TVE G + GG +KNLFLKD+K F++++A D+
Sbjct: 17 LLAYLDACGFDTITTRHEALFTVEQSQALRGELEGGHTKNLFLKDRKGNFFLLTAQEDSD 76
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
V +K+L + +G G+G + M E+L V G+VT F ++N+ + +DK
Sbjct: 77 VPLKILHKLIG-GQGKFSFGSPDMMQELLGVTPGAVTAFGVINDREGKLRFAIDKRLLEH 135
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
++ HPL+N+ + ++ +DL F K+ G DP VDL+A+P
Sbjct: 136 DKINCHPLTNEATTTIARDDLLAFAKATGHDPLIVDLDADP 176
>gi|239833595|ref|ZP_04681923.1| YbaK/prolyl-tRNA synthetase associated region containing protein
[Ochrobactrum intermedium LMG 3301]
gi|239821658|gb|EEQ93227.1| YbaK/prolyl-tRNA synthetase associated region containing protein
[Ochrobactrum intermedium LMG 3301]
Length = 184
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S +L L L IE EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 14 MPLSPSELHDYLDKLGIEVKTVEHPPLFTVADSQSLRGEIPGGHTKNLFLKDKKDNFFLV 73
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E +++ L V GSVT F VN++A +V ++L
Sbjct: 74 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMDYLGVIPGSVTVFGAVNDTAHNVQVIL 132
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ +DL FLKS G +P
Sbjct: 133 DADLMKHDVINGHPLTNEATTSIKRDDLVAFLKSTGHEP 171
>gi|410900662|ref|XP_003963815.1| PREDICTED: prolyl-tRNA synthetase associated domain-containing
protein 1-like [Takifugu rubripes]
Length = 169
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L+ L I + EHP V TVE Y+ + G ++KNLFLKDKK + ++VS D +V++
Sbjct: 13 LESLNIVTNCVEHPPVFTVEEMMPYLQEVNGAITKNLFLKDKKKKSLWLVSVRHDRQVNL 72
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQE 128
LS++L G LR A E MLE LKV G T AL+ + + V L+LD+ +
Sbjct: 73 NDLSKKLNSGSCNLRFADEAIMLEKLKVGQGCATALALLFDKDQSVRLVLDQDLVQGGHD 132
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+FHP++N ++ L DL FLK G +P
Sbjct: 133 HVYFHPMTNAATMGLRPEDLMCFLKETGHEP 163
>gi|444311465|ref|ZP_21147073.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Ochrobactrum intermedium M86]
gi|443485138|gb|ELT47932.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Ochrobactrum intermedium M86]
Length = 171
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S +L L L IE EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPLSPSELHDYLDKLGIEVKTVEHPPLFTVADSQSLRGEIPGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E +++ L V GSVT F VN++A +V ++L
Sbjct: 61 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMDYLGVIPGSVTVFGAVNDTAHNVQVIL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ +DL FLKS G +P
Sbjct: 120 DADLMKHDVINGHPLTNEATTSIKRDDLVAFLKSTGHEP 158
>gi|424872809|ref|ZP_18296471.1| LOW QUALITY PROTEIN: hypothetical protein Rleg5DRAFT_4325
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168510|gb|EJC68557.1| LOW QUALITY PROTEIN: hypothetical protein Rleg5DRAFT_4325
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 221
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++++L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 60 TREELFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFVKDKKDRYFLLTVE 119
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G G G + E ++E L V GSVT F +N++A +V +LD
Sbjct: 120 ENAAVDLKQVHNAIG-GSGRVSFGRPEKLMEYLGVAPGSVTAFGAINDTAENVTFVLDAE 178
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A E HPLSND + S+ + DL +F+++ G P
Sbjct: 179 LMAHEIVNCHPLSNDATTSIASGDLIRFMEATGHKP 214
>gi|114770285|ref|ZP_01447823.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacterales
bacterium HTCC2255]
gi|114549122|gb|EAU52005.1| YbaK/prolyl-tRNA synthetase domain protein [alpha proteobacterium
HTCC2255]
Length = 178
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNI-----GGGLSKNLFLKDKKHRFY 58
S D+LL L I+++ + H + TVE K G GGG KNL+L+DKK +
Sbjct: 15 SSDELLKTLDQWNIKYNLFVHVPLRTVEDSKKVQGIFISSENGGGHVKNLYLRDKKKKNI 74
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
++ A D VD+K LS+ LG L E +++ L V GSVTP +++ DV+L
Sbjct: 75 LLVAQQDQTVDLKKLSKNLGFS--NLSFGSPERLMQHLGVRPGSVTPLSMITGVKNDVSL 132
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
LDK K++ + HPL ND +I + +L+KF IG + DL
Sbjct: 133 FLDKNLKSKSVIYIHPLVNDRTIEMTIENLEKFFSKIGISYTWTDL 178
>gi|241206784|ref|YP_002977880.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860674|gb|ACS58341.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 169
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++++L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TREELFAFLDGLGIAHKTVDHAPVFTVAESVSLRDEIPGGHTKNLFVKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G G G + E ++E L V GSVT F +N++A +V +LD
Sbjct: 68 ENAAVDLKQVHNAIG-GSGRVSFGRPEKLMEYLGVAPGSVTAFGAINDTAENVTFVLDAE 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A E HPLSND + S+ ++DL +F+++ G P
Sbjct: 127 LMAYEIVNCHPLSNDATTSIASSDLIRFMEATGHKP 162
>gi|254472502|ref|ZP_05085902.1| YbaK/prolyl-tRNA synthetase associated region [Pseudovibrio sp.
JE062]
gi|211958785|gb|EEA93985.1| YbaK/prolyl-tRNA synthetase associated region [Pseudovibrio sp.
JE062]
Length = 175
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S+ QL++ L++L I S +H V TV A I GG +KNLFLKDKK ++V
Sbjct: 1 MPASRSQLISFLEELNIPVSTIDHEPVFTVAESADLHDRIPGGHTKNLFLKDKKGNLFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALL 119
AL D +D+K +S +G G + + + E+L V GSVTPF+L+N+ + V+++
Sbjct: 61 VALHDATIDLKKISGIIG-ASGRVSFGKADLLEEVLGVTPGSVTPFSLINDREEQRVSVV 119
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
D QE FHPL N+ S +++ + L F K+ G D
Sbjct: 120 FDANMMEQEILNFHPLLNNASTAISADGLMAFAKACGHD 158
>gi|328541885|ref|YP_004301994.1| prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
gi|326411636|gb|ADZ68699.1| YbaK/prolyl-tRNA synthetase associated region [Polymorphum gilvum
SL003B-26A1]
Length = 197
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ L+A L L I + EH V TV I G ++NLF+KDKK R +++
Sbjct: 25 MPATRADLMAFLDALGIATTTVEHRPVFTVAEGLDLHEAIPGAHTRNLFVKDKKGRLFLI 84
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALL 119
LAD VD+K LG +G + E ++E+L VP GSVTPFAL+N+ +AR V +
Sbjct: 85 VVLADATVDLKQAHHVLG-AQGRVSFGSAEQLMEVLGVPPGSVTPFALINDRAARRVTPV 143
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D +HPL+ND + ++ +DL F ++ G +P
Sbjct: 144 FDAAMMRHPVLNYHPLTNDATTTIARDDLMVFARACGHEP 183
>gi|218675244|ref|ZP_03524913.1| hypothetical protein RetlG_29488 [Rhizobium etli GR56]
Length = 169
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+KD L L L I + +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TKDDLFTFLDGLGIAYKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E ++E L V G+VT F +N++A +V +LD
Sbjct: 68 ENAEVDLKQVHTIIG-GSGRVSFGRAEKLMEYLGVIPGAVTAFGAINDTAGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A+E HPL+ND + S+ + DL +F+++ G P
Sbjct: 127 LMAEEVVNCHPLANDATTSIASGDLVRFMEATGHKP 162
>gi|404317538|ref|ZP_10965471.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Ochrobactrum anthropi CTS-325]
Length = 173
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S +L L+ L IE EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPLSPSELHDYLQKLGIEVKTVEHPPLFTVADSQSLRGEIPGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E +LE L V G+VT F VN++A +V ++L
Sbjct: 61 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLLEYLGVIPGAVTVFGAVNDTAHNVQVIL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ DL FL S G +P
Sbjct: 120 DADLMKYDVINGHPLTNEATTSIKREDLVAFLTSTGHEP 158
>gi|294085366|ref|YP_003552126.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664941|gb|ADE40042.1| YbaK/prolyl-tRNA synthetase domain protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 182
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++A LK L I FS + HP + TVE ++ + G KNL+++D+K + ++V A D
Sbjct: 18 IMAVLKRLDISFSTHHHPPLRTVEDSKQFRDGMNGAHIKNLYMRDRKKKNFLVVADEDRT 77
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+DMK L+ R+G + L + + E+L V G+V+P L+N+ + V L++D
Sbjct: 78 IDMKTLNGRIGCDR--LSFGSADRLFEMLGVRPGAVSPLTLINDPDQAVRLVIDAKILQG 135
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HPL ND+++ ++ + L +F + G DP +D ++
Sbjct: 136 GMIYVHPLVNDVTLGMSPDGLRRFFQHTGHDPMVLDFDS 174
>gi|428180626|gb|EKX49493.1| hypothetical protein GUITHDRAFT_85821 [Guillardia theta CCMP2712]
Length = 700
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMT---VEAQAKYVG-NIGGGLSKNLFLKDKKHRFYIV 60
++ L A+LK+L I EH T VE+ A+ G G KN+FLK KK +
Sbjct: 4 QEMLFAKLKELGIPTVTKEHKQCFTAEDVESVAEECGLQPASGRCKNMFLKSKKGDLFCF 63
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ + +K+DMK+LS++LG + R A +E + +L+V GSVTPFA +N++ +
Sbjct: 64 TTQSASKIDMKLLSKKLGAPE--CRFAGDEYLASVLQVIKGSVTPFAAINDTENKCTFAI 121
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK ++ + HPL ND S S++ ++L KFL+++G P +D
Sbjct: 122 DKDLMKEQTLWLHPLHNDKSTSISADNLVKFLEAVGHPPKILDF 165
>gi|433772355|ref|YP_007302822.1| hypothetical protein Mesau_00964 [Mesorhizobium australicum
WSM2073]
gi|433664370|gb|AGB43446.1| hypothetical protein Mesau_00964 [Mesorhizobium australicum
WSM2073]
Length = 165
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++ L+A L +L I S HP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTEADLMAFLAELGIAVSTIRHPPLYTVADSQALRGEIAGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E+L V G+VT F +VN+ V L+L
Sbjct: 61 TVGEDAVVDLKQIHQLIG-AASRVSFGKPEMLMELLGVTPGAVTVFGIVNDRENRVKLVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
DK HPL+N+ + S+ DL +F+++ G D A + + A
Sbjct: 120 DKDLMDHSVINAHPLTNEATTSIAAADLIRFVEATGHDAAILKVSA 165
>gi|307943867|ref|ZP_07659211.1| YbaK/prolyl-tRNA synthetase associated region [Roseibium sp.
TrichSKD4]
gi|307773497|gb|EFO32714.1| YbaK/prolyl-tRNA synthetase associated region [Roseibium sp.
TrichSKD4]
Length = 183
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L+ + IE S +H V TV I GG +KNLF+KDKK R ++V
Sbjct: 7 MPEDRAELMNFFQSEGIEVSTVDHEPVFTVAESGDLHDRIPGGHTKNLFVKDKKGRLFLV 66
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALL 119
L D VD+K L Q +G G+G + + ++E L V GSVTPF+L+N+ A+ V +
Sbjct: 67 VLLHDANVDLKKLHQVVG-GQGRVSFGNADLLMEALGVTPGSVTPFSLINDRDAQRVTPV 125
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D E FHPL ND + S+ + DL F K+ G +P
Sbjct: 126 FDAAMMEHEILNFHPLLNDATTSIKSGDLLNFAKACGHEP 165
>gi|265985252|ref|ZP_06097987.1| YbaK/prolyl-tRNA synthetase associated region [Brucella sp. 83/13]
gi|306838619|ref|ZP_07471455.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella sp. NF
2653]
gi|264663844|gb|EEZ34105.1| YbaK/prolyl-tRNA synthetase associated region [Brucella sp. 83/13]
gi|306406262|gb|EFM62505.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella sp. NF
2653]
Length = 180
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L IE + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIEVTTVEHPPLFTVADSQNLCGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V GSVT F N++ V ++L
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVIL 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D G + HPL+N+ + S+ DL FLKS G +P
Sbjct: 127 DAGLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|405965039|gb|EKC30467.1| UPF0566 protein [Crassostrea gigas]
Length = 188
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
K++LL++L + IE EHP V TVE ++ N G +KNLFLKDKK R Y+ A
Sbjct: 27 KEELLSKLAEWNIETETVEHPQVFTVEQALPHLENTEGKFAKNLFLKDKKKRLYLFCAPH 86
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D + + L++ +G GGLR A + E L + GSV+ F ++N++ +V L+LD+
Sbjct: 87 DADIKLNDLAKLVG-ATGGLRFADASILEEKLGIQEGSVSVFGIINDTENEVKLVLDQRL 145
Query: 125 --KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ + FHP+ N + S++ DL F+ +P V +
Sbjct: 146 LDETYTKLGFHPMVNSATTSISPCDLKIFIDKTNHEPLIVTI 187
>gi|329891202|ref|ZP_08269545.1| ybaK / prolyl-tRNA synthetase associated domain protein
[Brevundimonas diminuta ATCC 11568]
gi|328846503|gb|EGF96067.1| ybaK / prolyl-tRNA synthetase associated domain protein
[Brevundimonas diminuta ATCC 11568]
Length = 206
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY + +L A + + IE + ++HPAV VE ++ G +KNLFLKDKK R +++S
Sbjct: 42 AYDRARLPAWMAEHGIEQTTHDHPAVFRVEEGLDLKADLPGLHTKNLFLKDKKGRLWLIS 101
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A DT +D+K + +G L E + E L V GSVT L+N++ R V +LD
Sbjct: 102 AAQDTVIDLKRAHR--AMGSDRLSFGNETLLWETLGVRPGSVTALGLINDADRRVTFVLD 159
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ FHPL+N + +L+ + + L + R+P VD +A
Sbjct: 160 RRLWEAAVVNFHPLANTATTALSQDSFRRVLALLDREPIVVDFDA 204
>gi|170748900|ref|YP_001755160.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium radiotolerans JCM 2831]
gi|170655422|gb|ACB24477.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
radiotolerans JCM 2831]
Length = 170
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + D LLARL++ + + YEH V+TVEA G+I G +KNLFL+D K +++V
Sbjct: 1 MPLTSDDLLARLRERGVAYKLYEHAPVLTVEAMMAACGDIVGAHTKNLFLRDGKRTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K LG +GGL A E + E L V G+V+P A +N + V + +
Sbjct: 61 TLHHDAQVDLKAFRTVLG-ARGGLSFASAEALGEQLGVASGAVSPLAALNAAPGRVRIFI 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
R HPL + +++L +DL L++ G P
Sbjct: 120 QDSLLTAARINVHPLVSTRTLNLTPDDLLAALRAEGHMP 158
>gi|306846106|ref|ZP_07478668.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella inopinata
BO1]
gi|306273357|gb|EFM55218.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella inopinata
BO1]
Length = 180
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L IE + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIEVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V GSVT F N++ V ++L
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVIL 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D G + HPL+N+ + S+ DL FLKS G +P
Sbjct: 127 DAGLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|190893828|ref|YP_001980370.1| hypothetical protein RHECIAT_CH0004263 [Rhizobium etli CIAT 652]
gi|190699107|gb|ACE93192.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 225
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+K+ L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 64 TKEDLFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 123
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E ++E L V G+VT F +N++A +V +LD
Sbjct: 124 ENAEVDLKQVHTIIG-GSGRVSFGRAEKLMEYLGVIPGAVTAFGAINDTAGNVTFVLDAD 182
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A+E HPL+ND + S+ + DL +F+++ G P
Sbjct: 183 LMAEEIVNCHPLANDATTSIASGDLVRFMEATGHKP 218
>gi|170742727|ref|YP_001771382.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium sp. 4-46]
gi|168197001|gb|ACA18948.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium sp.
4-46]
Length = 172
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A D L A L DL I H V TV + GG SKNLFLKDK+ R ++V
Sbjct: 3 AAGPDDLFAYLADLGIPVRTVAHRPVHTVAESRDLKAGMPGGHSKNLFLKDKRGRLFLVV 62
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A A+ +D+K L +G G L E + +L V GSVTPF ++N+ A V+++LD
Sbjct: 63 AEAEAAIDLKRLHGVIG-ATGRLSFGSAELLEAVLGVKPGSVTPFGVINDRAGAVSVVLD 121
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A++ HPL N + ++ DL +FL++ G P + L A
Sbjct: 122 AALMARDPVNVHPLHNAATTAIAPGDLIRFLEATGHPPRVMALPA 166
>gi|153010604|ref|YP_001371818.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Ochrobactrum anthropi ATCC 49188]
gi|151562492|gb|ABS15989.1| YbaK/prolyl-tRNA synthetase associated region [Ochrobactrum
anthropi ATCC 49188]
Length = 173
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S +L + L IE EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPLSPSELHDYFQKLGIEVKTVEHPPLFTVADSQSLRGEIPGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V G+VT F VN++A +V ++L
Sbjct: 61 TVEEDAVVDLKSIHQLIG-AASRVSFGKSEKLMEYLGVIPGAVTVFGAVNDTAHNVQVIL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ DL FL S G +P
Sbjct: 120 DADLMKYDVINGHPLTNEATTSIKREDLVAFLTSTGHEP 158
>gi|119620507|gb|EAX00102.1| hCG16980 [Homo sapiens]
Length = 138
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP AL + DV +LD F E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFV 122
Query: 153 KSIGRDPAYVDLEAN 167
K G DP ++ + N
Sbjct: 123 KMTGHDPIILNFDKN 137
>gi|281352970|gb|EFB28554.1| hypothetical protein PANDA_001928 [Ailuropoda melanoleuca]
Length = 138
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQINLNDLAKQLGVGSGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP AL + DV +LD F E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFV 122
Query: 153 KSIGRDPAYVDLEAN 167
+ G DP ++ + N
Sbjct: 123 RKTGHDPIIINFDKN 137
>gi|118592113|ref|ZP_01549507.1| hypothetical protein SIAM614_25592 [Stappia aggregata IAM 12614]
gi|118435409|gb|EAV42056.1| hypothetical protein SIAM614_25592 [Labrenzia aggregata IAM 12614]
Length = 173
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++D LLA ++L I + +H V TV I G +KNLF+KDKK R +++
Sbjct: 1 MPATRDDLLAFFEELGIPVTTVDHEPVFTVAESGDLHERIPGAHTKNLFVKDKKGRLFLI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALL 119
AL D ++D+K + Q +G +G + + ++E+L V GSVTPF+L+N+ A+ V +
Sbjct: 61 VALHDAEIDLKRVHQIIG-AQGRVSFGNADLLMEVLGVEPGSVTPFSLINDREAQKVTPV 119
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
D E +HPL N+ + S+++ DL KF + G
Sbjct: 120 FDAAMMQHEVLNYHPLKNNATTSISSADLLKFASACGH 157
>gi|418055386|ref|ZP_12693441.1| YbaK/prolyl-tRNA synthetase associated region [Hyphomicrobium
denitrificans 1NES1]
gi|353210968|gb|EHB76369.1| YbaK/prolyl-tRNA synthetase associated region [Hyphomicrobium
denitrificans 1NES1]
Length = 179
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++D LL RL +L I+ + EH AV TV + G +KNLFLKD++ +V
Sbjct: 9 MPLNRDDLLIRLGELDIKTTTVEHSAVFTVAESQSVEIPLPGAHTKNLFLKDERGTLVLV 68
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A + T VD+K L++RLG+G+ ++ L V GSVT FA+ N+ V +++
Sbjct: 69 IAKSTTAVDLKALAKRLGMGR--FSFGKPSLLMSTLGVTPGSVTAFAVANDIEGRVNVVI 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
D+ + HPL N + ++ DL +F++S G +P+ + L A
Sbjct: 127 DEALMVHDSVNCHPLENTATTNIACEDLLRFIRSTGHEPSVMALTA 172
>gi|83309829|ref|YP_420093.1| hypothetical protein amb0730 [Magnetospirillum magneticum AMB-1]
gi|82944670|dbj|BAE49534.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 163
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A + D L A L I + H TVE + G I G KNLFLKD K + ++V
Sbjct: 3 AATPDDLFALFDRLDIRAVTHHHEPAFTVEEGHRVWGAIPGVHCKNLFLKDGKGQLWLVV 62
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A A+ +VD+K L R+G + AP T E+L + GSVTPFA++N++ V ++LD
Sbjct: 63 APAERRVDLKSLPARIGSARLSFGSAPLLT--EVLGIEPGSVTPFAVINDTDHRVNVVLD 120
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q+ +HPL N M+ ++ +L +F G P V+L
Sbjct: 121 SWMMDQDLINYHPLRNHMTTTVTPAELIRFFGHTGHAPLTVEL 163
>gi|424897457|ref|ZP_18321031.1| hypothetical protein Rleg4DRAFT_3410 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181684|gb|EJC81723.1| hypothetical protein Rleg4DRAFT_3410 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 169
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++++L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TREELFAFLDGLGIAHKTVDHAPVFTVAESIALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E M++ L V G+VT F +N++A +V +LD
Sbjct: 68 ENAEVDLKQVHNIIG-GSGRVSFGRAEKMMDYLGVIPGAVTAFGAINDTAGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+E HPLSND + S+ ++DL +F+++ G P + L
Sbjct: 127 LMREEIVNCHPLSNDATTSIASSDLVRFMEATGHKPLVLKL 167
>gi|421589646|ref|ZP_16034762.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium sp. Pop5]
gi|403705366|gb|EJZ20972.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium sp. Pop5]
Length = 169
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D+L L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TRDELFTFLDGLGIPHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E ++E L V G+VT F +N++A +V +LD
Sbjct: 68 ENAEVDLKQVHNLIG-GSGRVSFGRAEKLMEYLGVVPGAVTAFGAINDTAGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+E HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMREEIVNCHPLSNDATTSIASGDLVRFMEATGHKP 162
>gi|424886816|ref|ZP_18310424.1| hypothetical protein Rleg10DRAFT_4855 [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393176167|gb|EJC76209.1| hypothetical protein Rleg10DRAFT_4855 [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 169
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A ++D L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 6 AKTRDDLFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLT 65
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ +VD+K + +G G G + E +++ L V G+VT F +N++A +V +LD
Sbjct: 66 VEENAEVDLKQVHTIIG-GSGRVSFGRAEKLMDYLGVVPGAVTAFGAINDAAGNVTFVLD 124
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+E HPLSND + S+ ++DL +F+++ G P
Sbjct: 125 AELMREEIVNCHPLSNDATTSIASSDLIRFMEATGHKP 162
>gi|390448401|ref|ZP_10234021.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Nitratireductor aquibiodomus RA22]
gi|389666142|gb|EIM77597.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Nitratireductor aquibiodomus RA22]
Length = 165
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S + LL L L IE + HPA+ TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKSPEALLEFLGKLGIEAETHRHPALFTVSDSQSLRGEIPGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D +VD+K + ++G + + ++E L V GSVT F ++N+ V ++L
Sbjct: 61 TVDEDAQVDLKTIHHKIG-AASRVSFGKPDKLMEHLGVEPGSVTVFGVINDDHHRVTVVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ +DL +FL+++ P
Sbjct: 120 DADLMDNDIINAHPLTNEATTSIGRDDLMRFLEAVEHQP 158
>gi|398830709|ref|ZP_10588890.1| hypothetical protein PMI41_03775 [Phyllobacterium sp. YR531]
gi|398213289|gb|EJM99882.1| hypothetical protein PMI41_03775 [Phyllobacterium sp. YR531]
Length = 169
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTV-EAQAKYVGNIGGGLSKNLFLKDKKHRFYI 59
M S ++L+ + DL IE S H AV TV EAQA G I G +KNLFLKDKK F++
Sbjct: 1 MPKSIEELMQFIGDLGIEVSTVRHAAVFTVAEAQA-LRGQITGAHTKNLFLKDKKDNFFL 59
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
++ + +VD+K + ++G + E +LE L + GSV+ ++N+ +V ++
Sbjct: 60 LTVDEEAEVDLKTIHTKIG-AASRVSFGKPEKLLEYLGLTPGSVSVLGVINDEDHNVKVV 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
LD+ HPL+N+ + S++ +DL +FL++ G P + +EA+
Sbjct: 119 LDESLFQHASINAHPLTNEATTSISPDDLLRFLEATGHSPLILKIEAS 166
>gi|154244274|ref|YP_001415232.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Xanthobacter autotrophicus Py2]
gi|154158359|gb|ABS65575.1| YbaK/prolyl-tRNA synthetase associated region [Xanthobacter
autotrophicus Py2]
Length = 169
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + D LL L I + + HP V TV G+I G +KNLFL+D K +++V
Sbjct: 1 MPLTPDALLDLLAANGIAATTHAHPPVHTVAESQALRGDIPGAHTKNLFLRDGKKTYFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ DT V++K L LG KG L E + E L V GSVT A N++A V + +
Sbjct: 61 AIAEDTPVNLKALKGPLG-AKGSLSFGSAEALYEHLGVLPGSVTLLAAANDAAGLVTIAI 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
D E HPL+N+ + SL LD F + G +P +D+ P
Sbjct: 120 DAALLKAEAVCCHPLTNERTTSLTPQALDAFFRLTGHEPLVIDIPPAP 167
>gi|297266029|ref|XP_001112311.2| PREDICTED: UPF0566 protein-like [Macaca mulatta]
Length = 138
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP AL + DV +LD E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLALFCDDG-DVKFVLDSAILEGGHEKVYFHPMTNAATMGLSPEDFLTFV 122
Query: 153 KSIGRDPAYVDLEAN 167
K+ G DP ++ + N
Sbjct: 123 KTTGHDPIILNFDKN 137
>gi|301106649|ref|XP_002902407.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262098281|gb|EEY56333.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 764
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
++ A L L I + ++EH + T E + ++ G +KNL KDKK ++V+A T
Sbjct: 65 EVAAALSSLSIAYEKHEHRELPTTEDVIAELSHLPGLSTKNLVFKDKKEGLFLVTAAPTT 124
Query: 67 KVDMKVLSQRL---GLG--KGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
VD K L RL G+G K LR A E+ + LKV GSV+P +++++ +V +LD
Sbjct: 125 VVDTKKLGARLHAAGIGGKKWNLRFATEDVLANTLKVTKGSVSPLCVMHDTKTEVRFVLD 184
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
K + HPL ND + S+ ++DL KF+K +P VD A
Sbjct: 185 KALLDTTQVNCHPLRNDQTYSIKSDDLLKFVKHYNHEPIVVDFAAQ 230
>gi|399069317|ref|ZP_10749352.1| hypothetical protein PMI01_00383 [Caulobacter sp. AP07]
gi|398045224|gb|EJL37973.1| hypothetical protein PMI01_00383 [Caulobacter sp. AP07]
Length = 168
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L A L + S +HP V VE + + GG +KNLFLKD K + +++SAL
Sbjct: 3 TRADLFAFLDAHGVAHSTLDHPPVFRVEEGLEIKAALPGGHTKNLFLKDAKGQLWLISAL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T +D+K L +G + L M E L V GSVT F L+N++ V +LD
Sbjct: 63 GETMIDLKRLHTVIGSAR--LSFGNAALMEETLGVTPGSVTAFGLINDAGGRVRFVLDAA 120
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ FHPLSND + +++ +FL ++G P VD A
Sbjct: 121 LAGADPVNFHPLSNDATTAVSQAGFRRFLAALGITPMIVDFTA 163
>gi|374328449|ref|YP_005078633.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Pseudovibrio sp. FO-BEG1]
gi|359341237|gb|AEV34611.1| YbaK/prolyl-tRNA synthetase associated region [Pseudovibrio sp.
FO-BEG1]
Length = 167
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
++ L++L I S +H V TV A I GG +KNLFLKDKK ++V AL D +
Sbjct: 1 MSFLEELNIPVSTIDHEPVFTVAESADLHDRIPGGHTKNLFLKDKKGNLFLVVALHDATI 60
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKGFKAQ 127
D+K +S +G G + + + E+L V GSVTPF+L+N+ A+ V+++ D Q
Sbjct: 61 DLKKISSIIG-ASGRVSFGKADLLEEVLGVTPGSVTPFSLINDREAQRVSVVFDADMMEQ 119
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
E FHPL N+ S +++ + L F K+ G D
Sbjct: 120 EVLNFHPLLNNASTAISADGLMAFAKACGHD 150
>gi|429769480|ref|ZP_19301588.1| YbaK/prolyl-tRNA synthetase domain protein [Brevundimonas diminuta
470-4]
gi|429186938|gb|EKY27863.1| YbaK/prolyl-tRNA synthetase domain protein [Brevundimonas diminuta
470-4]
Length = 184
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY + +LL + + I + ++HPAV VE + + G +KNLFLKDKK R +++S
Sbjct: 20 AYDRPRLLDWMAEHGIAQTTHDHPAVFRVEEGLELKAALPGVHTKNLFLKDKKGRLWLIS 79
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A DT +D+K + +G L E + E L V GSVT L+N++ R V +LD
Sbjct: 80 AAQDTVIDLKRAHR--AMGSDRLSFGNETLLWETLGVRPGSVTALGLINDTDRRVTFVLD 137
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ + FHPL+N + +L+ + + L + R P VD A
Sbjct: 138 QRLWEADIVNFHPLTNTATTALSQDSFRQVLALLDRAPIVVDFSA 182
>gi|209882409|ref|XP_002142641.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
gi|209558247|gb|EEA08292.1| prolyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
Length = 687
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQA----KYVGNIGGGLSKNLFLKDK-KHRFYIVS 61
+L+ RLK+L I + ++H A +E K +KNL LK K K Y+++
Sbjct: 5 ELIIRLKELSINYDAFKHVATPNMETMINTLRKEAEETNTLFAKNLVLKPKNKDILYLIT 64
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A DT MK L LG G LR A E + L V GSVTP AL NE+ +V + D
Sbjct: 65 AHNDTNTKMKNLGPILGCSSGNLRFADENILYSNLGVYPGSVTPLALSNENCANVEVFFD 124
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQPPDLAA 180
+ + + F HPL+N S S++T+DL KF++S G+ + ++E N K+ P + +
Sbjct: 125 EKLRGS-KVFVHPLTNTESFSISTDDLVKFVESCGKSVNWFNVENN-ITNKETIPQIVS 181
>gi|209551347|ref|YP_002283264.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|424916380|ref|ZP_18339744.1| hypothetical protein Rleg9DRAFT_3943 [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209537103|gb|ACI57038.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392852556|gb|EJB05077.1| hypothetical protein Rleg9DRAFT_3943 [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 169
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++++L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TREELFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E +++ L V G+VT F +N++A +V +LD
Sbjct: 68 ENAEVDLKQVHNLIG-GSGRVSFGRAEKLMDYLGVIPGAVTAFGAINDTAGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+E HPLSND + S+ ++DL +F+++ G P
Sbjct: 127 LMREEILNCHPLSNDATTSIASSDLVRFMEATGHKP 162
>gi|261750587|ref|ZP_05994296.1| YbaK/prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261740340|gb|EEY28266.1| YbaK/prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
Length = 180
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L I + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V GSVT F N++ V ++L
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGATNDTNHRVQVIL 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D G + HPL+N+ + S+ DL FLKS G +P
Sbjct: 127 DAGLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|23500621|ref|NP_700061.1| hypothetical protein BRA0894 [Brucella suis 1330]
gi|148558368|ref|YP_001257822.1| hypothetical protein BOV_A0838 [Brucella ovis ATCC 25840]
gi|161620947|ref|YP_001594833.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Brucella canis ATCC 23365]
gi|163845012|ref|YP_001622667.1| hypothetical protein BSUIS_B0886 [Brucella suis ATCC 23445]
gi|225629353|ref|ZP_03787386.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|256015656|ref|YP_003105665.1| hypothetical protein BMI_II888 [Brucella microti CCM 4915]
gi|260567851|ref|ZP_05838320.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella suis bv. 4
str. 40]
gi|261217485|ref|ZP_05931766.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M13/05/1]
gi|261220710|ref|ZP_05934991.1| YbaK/prolyl-tRNA synthetase [Brucella ceti B1/94]
gi|261318444|ref|ZP_05957641.1| YbaK/prolyl-tRNA synthetase associated region [Brucella
pinnipedialis B2/94]
gi|261320359|ref|ZP_05959556.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M644/93/1]
gi|261322878|ref|ZP_05962075.1| YbaK/prolyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261753845|ref|ZP_05997554.1| YbaK/prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261757088|ref|ZP_06000797.1| YbaK/prolyl-tRNA synthetase [Brucella sp. F5/99]
gi|265986243|ref|ZP_06098800.1| YbaK/prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|265995939|ref|ZP_06108496.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M490/95/1]
gi|294853845|ref|ZP_06794517.1| hypothetical protein BAZG_02826 [Brucella sp. NVSL 07-0026]
gi|340792670|ref|YP_004758134.1| hypothetical protein BPI_II950 [Brucella pinnipedialis B2/94]
gi|376277600|ref|YP_005153661.1| hypothetical protein BCA52141_II1772 [Brucella canis HSK A52141]
gi|376278843|ref|YP_005108876.1| hypothetical protein BSVBI22_B0886 [Brucella suis VBI22]
gi|384223404|ref|YP_005614569.1| hypothetical protein BS1330_II0887 [Brucella suis 1330]
gi|23464263|gb|AAN34066.1| conserved hypothetical protein [Brucella suis 1330]
gi|148369653|gb|ABQ62525.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|161337758|gb|ABX64062.1| YbaK/prolyl-tRNA synthetase associated region [Brucella canis ATCC
23365]
gi|163675735|gb|ABY39845.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225615849|gb|EEH12898.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998316|gb|ACU50003.1| hypothetical protein BMI_II888 [Brucella microti CCM 4915]
gi|260154516|gb|EEW89597.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella suis bv. 4
str. 40]
gi|260919294|gb|EEX85947.1| YbaK/prolyl-tRNA synthetase [Brucella ceti B1/94]
gi|260922574|gb|EEX89142.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M13/05/1]
gi|261293049|gb|EEX96545.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M644/93/1]
gi|261297667|gb|EEY01164.1| YbaK/prolyl-tRNA synthetase associated region [Brucella
pinnipedialis B2/94]
gi|261298858|gb|EEY02355.1| YbaK/prolyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261737072|gb|EEY25068.1| YbaK/prolyl-tRNA synthetase [Brucella sp. F5/99]
gi|261743598|gb|EEY31524.1| YbaK/prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|262550236|gb|EEZ06397.1| YbaK/prolyl-tRNA synthetase associated region [Brucella ceti
M490/95/1]
gi|264658440|gb|EEZ28701.1| YbaK/prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|294819500|gb|EFG36500.1| hypothetical protein BAZG_02826 [Brucella sp. NVSL 07-0026]
gi|340561129|gb|AEK56366.1| hypothetical protein BPI_II950 [Brucella pinnipedialis B2/94]
gi|343384852|gb|AEM20343.1| hypothetical protein BS1330_II0887 [Brucella suis 1330]
gi|358260281|gb|AEU08014.1| hypothetical protein BSVBI22_B0886 [Brucella suis VBI22]
gi|363405974|gb|AEW16268.1| hypothetical protein BCA52141_II1772 [Brucella canis HSK A52141]
Length = 180
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L I + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V GSVT F N++ V ++L
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVIL 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D G + HPL+N+ + S+ DL FLKS G +P
Sbjct: 127 DAGLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|206601447|gb|EDZ37935.1| DNA binding protein [Leptospirillum sp. Group II '5-way CG']
Length = 165
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M ++ + LKDL I F Y+HP + T ++ GG KNLFL++ Y+
Sbjct: 1 MHQNRQTVFDALKDLDIPFQVYDHPPLRTSGDAFLLSEDVEGGRCKNLFLRNSGGMNHYL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D +D+K+LSQRL + G A EE ++ +L V GSV+PF +N +DV ++
Sbjct: 61 VILELDVPLDLKILSQRLSEKRLG--FASEERLMRVLGVLPGSVSPFNFLNGKGKDVFII 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ E+ FHP N S+ L+ D K+L+++G ++DL
Sbjct: 119 VDQALLCHEKLVFHPNENTASLVLSVKDFKKYLQTLGNRIEFLDL 163
>gi|220920199|ref|YP_002495500.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Methylobacterium nodulans ORS 2060]
gi|219944805|gb|ACL55197.1| YbaK/prolyl-tRNA synthetase associated region [Methylobacterium
nodulans ORS 2060]
Length = 182
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + LLA L DL I H V TV + GG SKNLFLKD++ + ++V A
Sbjct: 5 TPEDLLAYLADLGIPVRTVAHRPVHTVAESRDLKAGLPGGHSKNLFLKDRRGQLFLVVAE 64
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
A+ ++D+K L +G G L E + +L V GSVTPF L+N+ V+++LD
Sbjct: 65 AEARIDLKRLHGAIG-ASGRLSFGSAEQLHAVLGVRPGSVTPFGLLNDRDGLVSVILDAA 123
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A + FHPL N + ++ DL +FL++ G P + L
Sbjct: 124 LMAHDPVNFHPLHNAATTAIAPGDLIRFLQATGHAPRVMTL 164
>gi|218663214|ref|ZP_03519144.1| hypothetical protein RetlI_29701 [Rhizobium etli IE4771]
Length = 161
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 9/156 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+KD L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TKDDLFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+ S R+ G+ + ++E L V G+VT F +N++A +V +LD
Sbjct: 68 ENAEVDLS--SGRVSFGRA-------DNLMEYLGVVPGAVTAFGAINDTAGNVTFVLDAD 118
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A+E HPLSND + S+ + DL +F+++ G P
Sbjct: 119 LMAEETVNCHPLSNDATTSIASGDLVRFMEATGHKP 154
>gi|306841544|ref|ZP_07474242.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella sp. BO2]
gi|306288381|gb|EFM59740.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella sp. BO2]
Length = 180
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L IE + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIEVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + Q +G + E ++E L V GSVT F N++ V ++L
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVIL 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D + HPL+N+ + S+ DL FLKS G +P
Sbjct: 127 DADLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|417915081|ref|ZP_12558708.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. SK95]
gi|342835530|gb|EGU69772.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. SK95]
Length = 162
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L +L I F EH +T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEMLNELDIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLV 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM +L +G + +RMA E++ E + +P G V+PF L+N + +D+ +
Sbjct: 61 IMDDKKRLDMDLLKDLVGANR--IRMASSESLFEKMMLPAGVVSPFGLLNNTDKDIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK +++R FHP +N+ ++ L+T D+ KFL++IG + ++L
Sbjct: 119 DKEIMSEKRMSFHPNTNEKTLFLDTKDILKFLEAIGYEAHIIEL 162
>gi|406671095|ref|ZP_11078335.1| hypothetical protein HMPREF9706_00595 [Facklamia hominis CCUG
36813]
gi|405581189|gb|EKB55240.1| hypothetical protein HMPREF9706_00595 [Facklamia hominis CCUG
36813]
Length = 162
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 4/153 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VD 69
+L +L +++ EHP +T E Y+ I G +K +FL ++K Y + + D K +D
Sbjct: 10 KLAELSMDYQIVEHPPALTTEEADSYIEGIEGVRTKTMFLTNRKKTAYYLLIMDDKKRLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + + +G K +RMA EE+++E + +P G V+PF L+N D+ + +D+ Q R
Sbjct: 70 MDLFKELVGEKK--IRMASEESLMEKMHLPAGVVSPFGLLNNEEHDIKVYIDQEIMDQSR 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
FHP +N+ +I + DL FL+SIG PA++
Sbjct: 128 MSFHPNTNEKTIFIARQDLLDFLESIGH-PAHI 159
>gi|418965369|ref|ZP_13517144.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. constellatus SK53]
gi|383342672|gb|EID20882.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. constellatus SK53]
Length = 162
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIKGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 DLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIGYEPHIIEL 162
>gi|86359560|ref|YP_471452.1| hypothetical protein RHE_CH03980 [Rhizobium etli CFN 42]
gi|86283662|gb|ABC92725.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 221
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+K++L A L L I + +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 60 TKEELFAFLDGLGIAYKTVDHAPVFTVAESVALRDEIPGGHTKNLFIKDKKDRYFLLTVE 119
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +VD+K + +G G G + E ++E L V G+VT F +N+S V +LD
Sbjct: 120 ENAEVDLKQVHTIIG-GSGRVSFGRAEKLMEYLGVIPGAVTAFGAINDSEAKVTFVLDAD 178
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
++ HPL+ND + S+ + DL +F+++ G P
Sbjct: 179 LMEEKIVNCHPLTNDATTSIASGDLIRFMEATGHKP 214
>gi|422826438|ref|ZP_16874617.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK678]
gi|324994556|gb|EGC26469.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK678]
Length = 162
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGIAFDVVEHPPAFTTEQADGYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLFEKMQLPPGTVSPFGLLNNEEKDIQVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +N+ +I ++T DL KFL+ +G +DL
Sbjct: 124 NEERMTFHPNTNEKTIFISTQDLFKFLQDLGYSYQVLDL 162
>gi|423068396|ref|ZP_17057184.1| hypothetical protein HMPREF9682_00405 [Streptococcus intermedius
F0395]
gi|355366651|gb|EHG14368.1| hypothetical protein HMPREF9682_00405 [Streptococcus intermedius
F0395]
Length = 162
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLTIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 DLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIGYEPHIIEL 162
>gi|84999652|ref|XP_954547.1| prolyl-trna synthetase [Theileria annulata]
gi|65305545|emb|CAI73870.1| prolyl-trna synthetase, putative [Theileria annulata]
Length = 702
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
D+L L + + +HP ++TV+ + + +NLF+ D RFY++SAL
Sbjct: 7 DKLFKLFHTLGLRYKVIKHPNLVTVKDMLEEPSLAGFRDDCIRNLFMLDSSKRFYLISAL 66
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
DT+V+ KVL R GL L M E ML +L V G++TPF+ +N++ V +L D
Sbjct: 67 YDTEVNWKVL--RKGLNVNKLHMGDENDMLSLLGVGRGNLTPFSAMNDTENKVRVLFDIR 124
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K++ HPLSND S+ + D+ KFL I P ++ L
Sbjct: 125 LKSKVDVVAHPLSNDQSVVMKMEDMLKFLTQINHFPTFLPL 165
>gi|417934751|ref|ZP_12578071.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. F0392]
gi|340771321|gb|EGR93836.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. F0392]
Length = 162
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L L I F EH +T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEMLNGLDIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLV 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM +L +G + +RMA E++ E + +P G V+PF L+N + +D+ +
Sbjct: 61 IMDDKKRLDMDLLKDLVGANR--IRMASSESLFEKMSLPAGVVSPFGLLNNTDKDIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK +++R FHP +N+ ++ L+T D+ KFL++IG + ++L
Sbjct: 119 DKEIMSEKRMSFHPNTNEKTLFLDTTDILKFLEAIGYEAHIIEL 162
>gi|256545356|ref|ZP_05472719.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398917|gb|EEU12531.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 162
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
+LK+L+I+F +HP T E KY+ G +K++FL D+K + FY+V ++D
Sbjct: 10 KLKELEIDFKIVDHPPAFTTEEADKYIEGHDGVRTKSMFLTDRKKKNFYLVILDDYKRLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M +G K ++MA E +++E +K+P G+V+PF L+N D+ +DK +E
Sbjct: 70 MDRFKDIVGEKK--VKMASENSLMEKMKLPAGTVSPFGLLNNEDHDIKFFMDKEIVDEEI 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N+ ++ L T DL K+L +IG + ++L
Sbjct: 128 MTFHPNINEKTLFLKTKDLFKYLDNIGYEVNIIEL 162
>gi|261216337|ref|ZP_05930618.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260917944|gb|EEX84805.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
Length = 180
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L L I + EHP + TV G I GG +KNLFLKDKK F++V+ D VD+K
Sbjct: 19 LHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLVTVEEDAVVDLK 78
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ Q +G + E ++E L V GSVT F N++ V ++LD G +
Sbjct: 79 SIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVILDAGLMKYDIIN 137
Query: 132 FHPLSNDMSISLNTNDLDKFLKSIGRDP 159
HPL+N+ + S+ DL FLKS G +P
Sbjct: 138 GHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|62317277|ref|YP_223130.1| hypothetical protein BruAb2_0338 [Brucella abortus bv. 1 str.
9-941]
gi|83269258|ref|YP_418549.1| hypothetical protein BAB2_0342 [Brucella melitensis biovar Abortus
2308]
gi|189022537|ref|YP_001932278.1| hypothetical protein BAbS19_II03230 [Brucella abortus S19]
gi|225686656|ref|YP_002734628.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella melitensis
ATCC 23457]
gi|237816837|ref|ZP_04595829.1| YbaK/prolyl-tRNA synthetase associated region containing protein
[Brucella abortus str. 2308 A]
gi|256262212|ref|ZP_05464744.1| YbaK/prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|260544516|ref|ZP_05820337.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella abortus
NCTC 8038]
gi|260564948|ref|ZP_05835433.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella melitensis
bv. 1 str. 16M]
gi|260756357|ref|ZP_05868705.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260759785|ref|ZP_05872133.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260763025|ref|ZP_05875357.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260882182|ref|ZP_05893796.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|265990188|ref|ZP_06102745.1| YbaK/prolyl-tRNA synthetase associated region [Brucella melitensis
bv. 1 str. Rev.1]
gi|265992705|ref|ZP_06105262.1| YbaK/prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|297249326|ref|ZP_06933027.1| hypothetical protein BAYG_02073 [Brucella abortus bv. 5 str. B3196]
gi|376270896|ref|YP_005113941.1| hypothetical protein BAA13334_II00777 [Brucella abortus A13334]
gi|384213396|ref|YP_005602479.1| hypothetical protein BM590_B0858 [Brucella melitensis M5-90]
gi|384410498|ref|YP_005599118.1| hypothetical protein BM28_B0860 [Brucella melitensis M28]
gi|62197470|gb|AAX75769.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939532|emb|CAJ12508.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189021111|gb|ACD73832.1| hypothetical protein BAbS19_II03230 [Brucella abortus S19]
gi|225642761|gb|ACO02674.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella melitensis
ATCC 23457]
gi|237787650|gb|EEP61866.1| YbaK/prolyl-tRNA synthetase associated region containing protein
[Brucella abortus str. 2308 A]
gi|260097787|gb|EEW81661.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella abortus
NCTC 8038]
gi|260152591|gb|EEW87684.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella melitensis
bv. 1 str. 16M]
gi|260670103|gb|EEX57043.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260673446|gb|EEX60267.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676465|gb|EEX63286.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260871710|gb|EEX78779.1| YbaK/prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|262763575|gb|EEZ09607.1| YbaK/prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|263000857|gb|EEZ13547.1| YbaK/prolyl-tRNA synthetase associated region [Brucella melitensis
bv. 1 str. Rev.1]
gi|263091908|gb|EEZ16230.1| YbaK/prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|297173195|gb|EFH32559.1| hypothetical protein BAYG_02073 [Brucella abortus bv. 5 str. B3196]
gi|326411045|gb|ADZ68109.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554336|gb|ADZ88975.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|363402068|gb|AEW19037.1| hypothetical protein BAA13334_II00777 [Brucella abortus A13334]
Length = 180
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L L I + EHP + TV G I GG +KNLFLKDKK F++V+ D VD+K
Sbjct: 19 LHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLVTVEEDAVVDLK 78
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ Q +G + E ++E L V GSVT F N++ V ++LD G +
Sbjct: 79 SIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVILDAGLMKYDIIN 137
Query: 132 FHPLSNDMSISLNTNDLDKFLKSIGRDP 159
HPL+N+ + S+ DL FLKS G +P
Sbjct: 138 GHPLTNEATTSIRREDLIAFLKSTGHEP 165
>gi|355565700|gb|EHH22129.1| hypothetical protein EGK_05335, partial [Macaca mulatta]
Length = 135
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP AL + DV +LD E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLALFCDDG-DVKFVLDSAILEGGHEKVYFHPMTNAATMGLSPEDFLTFV 122
Query: 153 KSIGRDPAYVDLE 165
K+ G DP ++ +
Sbjct: 123 KTTGHDPIILNFD 135
>gi|163757420|ref|ZP_02164509.1| hypothetical protein HPDFL43_18457 [Hoeflea phototrophica DFL-43]
gi|162284922|gb|EDQ35204.1| hypothetical protein HPDFL43_18457 [Hoeflea phototrophica DFL-43]
Length = 168
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ L RL L I S EHP V TV I GG +KNLFLKDKK R+++V+
Sbjct: 7 TRKDLFDRLDALNITHSTMEHPPVFTVAESQGLRDQIPGGHTKNLFLKDKKGRYFLVTLE 66
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ +V+++ + +G G + E ++E L V GSVT F+ +N+ DV +++D
Sbjct: 67 ENAEVNLRTIHTLIG-ASGRVSFGKHEALMEKLGVAPGSVTIFSAINDPGHDVTIVIDAP 125
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPL N+ + S+ DL +FL G +P
Sbjct: 126 LMEYDIINAHPLINEATTSIAREDLKRFLADTGHEP 161
>gi|355751325|gb|EHH55580.1| hypothetical protein EGM_04815, partial [Macaca fascicularis]
Length = 135
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGNGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP AL + DV +LD E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLALFCDDG-DVKFVLDSAILEGGHEKVYFHPMTNAATMGLSPEDFLTFV 122
Query: 153 KSIGRDPAYVDLE 165
K+ G DP ++ +
Sbjct: 123 KTTGHDPIILNFD 135
>gi|17988745|ref|NP_541378.1| DNA-binding protein [Brucella melitensis bv. 1 str. 16M]
gi|423168833|ref|ZP_17155535.1| hypothetical protein M17_02522 [Brucella abortus bv. 1 str. NI435a]
gi|423171734|ref|ZP_17158408.1| hypothetical protein M19_02266 [Brucella abortus bv. 1 str. NI474]
gi|423174536|ref|ZP_17161206.1| hypothetical protein M1A_01933 [Brucella abortus bv. 1 str. NI486]
gi|423176413|ref|ZP_17163079.1| hypothetical protein M1E_00675 [Brucella abortus bv. 1 str. NI488]
gi|423181163|ref|ZP_17167803.1| hypothetical protein M1G_02262 [Brucella abortus bv. 1 str. NI010]
gi|423184296|ref|ZP_17170932.1| hypothetical protein M1I_02264 [Brucella abortus bv. 1 str. NI016]
gi|423187445|ref|ZP_17174058.1| hypothetical protein M1K_02262 [Brucella abortus bv. 1 str. NI021]
gi|423189867|ref|ZP_17176476.1| hypothetical protein M1M_01548 [Brucella abortus bv. 1 str. NI259]
gi|17984559|gb|AAL53642.1| putative DNA-binding protein [Brucella melitensis bv. 1 str. 16M]
gi|374536156|gb|EHR07676.1| hypothetical protein M19_02266 [Brucella abortus bv. 1 str. NI474]
gi|374538039|gb|EHR09549.1| hypothetical protein M17_02522 [Brucella abortus bv. 1 str. NI435a]
gi|374539105|gb|EHR10611.1| hypothetical protein M1A_01933 [Brucella abortus bv. 1 str. NI486]
gi|374545753|gb|EHR17213.1| hypothetical protein M1G_02262 [Brucella abortus bv. 1 str. NI010]
gi|374546596|gb|EHR18055.1| hypothetical protein M1I_02264 [Brucella abortus bv. 1 str. NI016]
gi|374555015|gb|EHR26425.1| hypothetical protein M1E_00675 [Brucella abortus bv. 1 str. NI488]
gi|374555249|gb|EHR26658.1| hypothetical protein M1K_02262 [Brucella abortus bv. 1 str. NI021]
gi|374555907|gb|EHR27312.1| hypothetical protein M1M_01548 [Brucella abortus bv. 1 str. NI259]
Length = 173
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L L I + EHP + TV G I GG +KNLFLKDKK F++V+ D VD+K
Sbjct: 12 LHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLVTVEEDAVVDLK 71
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ Q +G + E ++E L V GSVT F N++ V ++LD G +
Sbjct: 72 SIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRVQVILDAGLMKYDIIN 130
Query: 132 FHPLSNDMSISLNTNDLDKFLKSIGRDP 159
HPL+N+ + S+ DL FLKS G +P
Sbjct: 131 GHPLTNEATTSIRREDLIAFLKSTGHEP 158
>gi|401683087|ref|ZP_10814976.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. AS14]
gi|400183769|gb|EJO18020.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. AS14]
Length = 162
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E +Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADRYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLFEKMQLPPGTVSPFGLLNNEEKDIHVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 DEERMTFHPNTNEKTIFVSTTDLFKFLQDLG 154
>gi|400291179|ref|ZP_10793206.1| putative YbaK/prolyl-tRNA synthetase [Streptococcus ratti FA-1 =
DSM 20564]
gi|399921970|gb|EJN94787.1| putative YbaK/prolyl-tRNA synthetase [Streptococcus ratti FA-1 =
DSM 20564]
Length = 162
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G + +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 DLFKELVGANR--IRMASSDSLFEKMMLPAGIVSPFGLLNNEDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIGYEPNIIEL 162
>gi|424827351|ref|ZP_18252160.1| hypothetical protein IYC_04773 [Clostridium sporogenes PA 3679]
gi|365980274|gb|EHN16310.1| hypothetical protein IYC_04773 [Clostridium sporogenes PA 3679]
Length = 163
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYNILNELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S R V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINNSDRKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
LDK K + FHP +N +++++ D KFL+
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYEDFHKFLQ 152
>gi|402489769|ref|ZP_10836562.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium sp. CCGE 510]
gi|401811108|gb|EJT03477.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhizobium sp. CCGE 510]
Length = 169
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++++L A L L I +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TREELFAFLDGLGIAHKTVDHAPVFTVAESVALRDEIPGGHTKNLFVKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G G G + E +++ L V G+VT F +N++A +V +LD
Sbjct: 68 ENAAVDLKQVHNAIG-GSGRVSFGRPEKLMDYLGVIPGAVTAFGAINDTAANVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+E HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMREEIINCHPLSNDATTSIASVDLIRFMEATGHKP 162
>gi|260583780|ref|ZP_05851528.1| YbaK/prolyl-tRNA synthetase [Granulicatella elegans ATCC 700633]
gi|260158406|gb|EEW93474.1| YbaK/prolyl-tRNA synthetase [Granulicatella elegans ATCC 700633]
Length = 160
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
+++ +L +L I F EH V+T E +++ I G +K +FL +KK R FY+V
Sbjct: 4 KVVDQLNELGIPFQIVEHEPVLTTEQADRFIEGIEGVRTKTMFLTNKKKRNFYLVIIDDA 63
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++DM V + + + ++MA ET+ + + + G+V+PF L+N +D+ + D+
Sbjct: 64 KRLDMDVFKE--IVEENRIKMASAETLNDKMMLLPGTVSPFGLLNNRDKDIQVYFDQEIV 121
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ER FHP +N+ +I +NT DL FLK IG +P + L
Sbjct: 122 SEERMCFHPNTNEKTIFVNTEDLFTFLKEIGYEPHVIQL 160
>gi|168180166|ref|ZP_02614830.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|387817784|ref|YP_005678129.1| similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Clostridium botulinum H04402 065]
gi|182668923|gb|EDT80899.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|322805826|emb|CBZ03391.1| similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Clostridium botulinum H04402 065]
Length = 163
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ + L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYSILNELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINNSDKKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
LDK K + FHP +N +++++ D KFL+ G +
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGNE 157
>gi|422758427|ref|ZP_16812189.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
gi|322411262|gb|EFY02170.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 162
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+ ++ LK L I + EH +T E ++ I G +K +FL +KK Y + + D
Sbjct: 5 ENIITELKKLNIPYELVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTQYYLLIMDD 64
Query: 66 TK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K +DM+ + +G + +RMA E+++ + + +P G V+PF L+N +D+ + D+
Sbjct: 65 QKMLDMENFKELVGANR--IRMASEDSLYQKMLLPPGVVSPFGLINNQDKDILVYFDQEI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +ND +I +NT DL FLK +G + ++L
Sbjct: 123 VTEERMSFHPNTNDRTIFINTKDLFSFLKHLGYEVNIIEL 162
>gi|26346152|dbj|BAC36727.1| unnamed protein product [Mus musculus]
gi|26351885|dbj|BAC39579.1| unnamed protein product [Mus musculus]
gi|116283678|gb|AAH33930.1| Ncrna00117 protein [Mus musculus]
gi|148691857|gb|EDL23804.1| RIKEN cDNA 2010316F05, isoform CRA_b [Mus musculus]
Length = 135
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 36 YVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLE 94
++ ++ G SKNLFLKDKK + +++V+ L D ++++ L ++LG+G G LR A E MLE
Sbjct: 4 HIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNDLGKQLGVGSGNLRFADETAMLE 63
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGF--KAQERCFFHPLSNDMSISLNTNDLDKFL 152
LKV G TP +L + DV +LD F E+ +FHP++N ++ L+ D F+
Sbjct: 64 KLKVGQGCATPLSLFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLIFV 122
Query: 153 KSIGRDPAYVDLE 165
K+ G DP ++ +
Sbjct: 123 KATGHDPIILNFD 135
>gi|322389707|ref|ZP_08063254.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus parasanguinis ATCC 903]
gi|321143546|gb|EFX38977.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus parasanguinis ATCC 903]
Length = 163
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVKEKLDELGISFDVVEHPPAFTTEQADSYIEGLEGVRTKSMFLTNKKKTQYYLLIMDDQ 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM +++G + +RMA E++ E +++P G+V+PF L+N +D+ + D+
Sbjct: 66 KPLDMDDFKEQVGANR--IRMASAESLAEKMQLPAGTVSPFGLLNNEEKDILVYFDQDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL++IG
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLEAIG 154
>gi|302381318|ref|YP_003817141.1| YbaK/prolyl-tRNA synthetase associated protein [Brevundimonas
subvibrioides ATCC 15264]
gi|302191946|gb|ADK99517.1| YbaK/prolyl-tRNA synthetase associated region [Brevundimonas
subvibrioides ATCC 15264]
Length = 168
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
+ +D LL + I + +H AV VE + + G +KNLFLKDKK R +++SA
Sbjct: 7 HDRDSLLPWMAGQGIPQATTDHAAVFRVEEGLELKAALPGAHTKNLFLKDKKARLWLISA 66
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
DT +D+K + +G + L E M + L V GSVT L+N+ R V +LD+
Sbjct: 67 RQDTVIDLKAAPRIIGSDR--LSFGNESLMWDTLGVRPGSVTALGLINDVDRRVTFVLDR 124
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ FHPL+N + +L+ +FL +IGR+P + +A
Sbjct: 125 RLWEADIVNFHPLTNTATTALSQAAFRQFLTAIGREPLVIAFDA 168
>gi|417933601|ref|ZP_12576921.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. F0392]
gi|340770171|gb|EGR92686.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. F0392]
Length = 163
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I + EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGIVYDVVEHPPAFTTEQADSYIEGLEGVRTKSMFLTNKKKTQYYLLIMDDH 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM +++G + +RMA +++ E + +P G+V+PF L+N + +D+ + DK
Sbjct: 66 KPLDMDDFKEQVGANR--IRMASADSLAEKMNLPAGTVSPFGLLNNAEKDIQVYFDKDIS 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL SIG
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLDSIG 154
>gi|392330232|ref|ZP_10274848.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus canis FSL Z3-227]
gi|391420104|gb|EIQ82915.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus canis FSL Z3-227]
Length = 162
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++A LK L I + EH +T E ++ I G +K +FL +KK Y + + D K
Sbjct: 7 VIAELKKLNISYELVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTQYYLLIMDDQK 66
Query: 68 -VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+DM+ + +G+ + +RMA +++ + + +P G V+PF L+N +D+ + D+
Sbjct: 67 MLDMENFKELVGVNR--IRMASADSLYQKMLLPPGVVSPFGLINNQDKDILVYFDQEIVT 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +ND +I +NT DL FLK +G + ++L
Sbjct: 125 EERMSFHPNTNDRTIFINTKDLFSFLKHLGYEVNIIEL 162
>gi|150018207|ref|YP_001310461.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Clostridium beijerinckii NCIMB 8052]
gi|149904672|gb|ABR35505.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
beijerinckii NCIMB 8052]
Length = 164
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 1 MAYSKDQLLARLKDLQ-IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFY 58
M+ + +Q + + DL I++++YEH + TVE +I GG KNLF++++K Y
Sbjct: 1 MSTTNEQKVYEILDLLGIKYTKYEHNPIYTVEEAQNLDIDIPGGHCKNLFIRNRKGDTHY 60
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V + +VD+K L +++G + L A EE + + LK+ GSVTPF L+N+S R+V +
Sbjct: 61 LVVLDENKRVDLKALDKQIGSTR--LSFASEERLYKYLKLKPGSVTPFGLINDSNREVIV 118
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
L+DK Q+ FHP N +I ++ D +KF+
Sbjct: 119 LVDKELANQDIVNFHPNVNTATIGISYKDFEKFI 152
>gi|259417450|ref|ZP_05741369.1| Ala-tRNA [Silicibacter sp. TrichCH4B]
gi|259346356|gb|EEW58170.1| Ala-tRNA [Silicibacter sp. TrichCH4B]
Length = 175
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN---IGGGLS---KNLFLKDKKHRF 57
S D LLA+L + + ++H + TVE ++K V + + G + KNL+L+D+K R
Sbjct: 14 SSDALLAQLDAWGLSYVLHQHVPLRTVE-ESKAVEDDLLVPGETALRLKNLYLRDRKKRN 72
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
Y+VS D ++D+K L +LG+G GL EE ++E L + G+VTP A++N + + V
Sbjct: 73 YLVSLQQDREIDLKALGAQLGVG--GLSFGSEERLMEHLGIRPGAVTPLAMINGAPKGVR 130
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+D + +R + HPL ND ++++ D F + IG P ++
Sbjct: 131 FFMDAEAQTADRIYMHPLVNDRTVAMPRADFMTFCEKIGIAPEWI 175
>gi|270291718|ref|ZP_06197934.1| conserved hypothetical protein [Streptococcus sp. M143]
gi|270279803|gb|EFA25644.1| conserved hypothetical protein [Streptococcus sp. M143]
Length = 162
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L L I F EH T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEMLNGLDIPFEIVEHEPAFTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLV 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM +L +G + +RMA E++ E + +P G V+PF L+N + +D+ +
Sbjct: 61 IMDDKKRLDMDLLKDLVGANR--IRMASSESLFEKMSLPAGVVSPFGLLNNTDKDIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK +++R FHP +N+ ++ L+T D+ KFL++IG + ++L
Sbjct: 119 DKEIMSEKRMSFHPNTNEKTLFLDTTDILKFLEAIGYEVHIIEL 162
>gi|294954482|ref|XP_002788190.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|294954484|ref|XP_002788191.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239903405|gb|EER19986.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239903406|gb|EER19987.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 720
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 8 LLARLKDLQIE--FSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
L A+L +L I F++ EH AV TV+ ++ + G +KNLFLKDKK +Y+++A +
Sbjct: 11 LDAKLAELGIPLVFTK-EHEAVSTVDEMINHLVGVEGEKAKNLFLKDKKKHYYLLTADVN 69
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++ D+ + + L LR + M E+L VPLGSVTPFALVNES+ V ++D
Sbjct: 70 SRTDLNSVGKLLSAKD--LRFVDGKKMTEMLGVPLGSVTPFALVNESSEGVKFVVDSKLV 127
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
+ HP N ++ ++ +L KF ++ G + +DL N
Sbjct: 128 ESDVVCVHPNRNTATVGVSGANLVKFAEATGHEVVVIDLPEN 169
>gi|392428588|ref|YP_006469599.1| regulatory protein [Streptococcus intermedius JTH08]
gi|419777235|ref|ZP_14303152.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
intermedius SK54]
gi|383845122|gb|EID82527.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
intermedius SK54]
gi|391757734|dbj|BAM23351.1| regulatory protein homolog [Streptococcus intermedius JTH08]
Length = 162
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 NLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T +L KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTNLLKFLEAIGYEPHIIEL 162
>gi|419799867|ref|ZP_14325185.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis F0449]
gi|385696839|gb|EIG27303.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis F0449]
Length = 163
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VD 69
+L +L IEF EHP +T E Y+ + G +K++FL +KK Y + + D K +D
Sbjct: 10 KLDELGIEFDVVEHPPALTTEQADSYIEGLEGVRTKSMFLTNKKKTQYYLLIMDDQKPLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M +++ + +RMA +++ E +++P G+V+PF L+N +D+ + DK ++E
Sbjct: 70 MDDFKEQVEANR--IRMASADSLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIVSEEI 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP +N+ +I + T DL +FL+SIG
Sbjct: 128 MTFHPNTNEKTIFIKTQDLFRFLESIG 154
>gi|254461656|ref|ZP_05075072.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacterales
bacterium HTCC2083]
gi|206678245|gb|EDZ42732.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacteraceae
bacterium HTCC2083]
Length = 182
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNI-----GGGLSKNLFLKDKKHRFY 58
S D ++ +L + I + + +H + TV K G GGG KNL+L+D K R
Sbjct: 18 SSDAIMEQLDNWGITYIRSDHVPLRTVADSKKVQGQFLSSEQGGGHIKNLYLRDNKKRNI 77
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
++ A D ++D+K L +L G+ L E +++ L V G+VTP +++N V L
Sbjct: 78 LLVAEQDRQIDLKTLHTKLETGR--LSFGSAERLMQNLGVRPGAVTPLSMINGVEAGVQL 135
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
LD G K+ + + HPL ND ++ + L +F I +P +VDLE
Sbjct: 136 FLDSGLKSCNQIYVHPLVNDRTLGITMEGLQQFFDKIKVEPVWVDLE 182
>gi|422878745|ref|ZP_16925211.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1059]
gi|422928593|ref|ZP_16961535.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis ATCC 29667]
gi|422931568|ref|ZP_16964499.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK340]
gi|332366798|gb|EGJ44539.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1059]
gi|339616375|gb|EGQ21024.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis ATCC 29667]
gi|339619868|gb|EGQ24443.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK340]
Length = 162
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKTMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA +++ E + +P G+V+PF L+N +DV + DK
Sbjct: 66 KRLDMNDF--KVQVGADRIRMASLDSLAEKMSLPAGTVSPFGLLNNEEKDVQVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 GEERMTFHPNTNEKTIFVSTRDLFKFLQDLG 154
>gi|422854371|ref|ZP_16901035.1| hypothetical protein HMPREF9384_1754 [Streptococcus sanguinis
SK160]
gi|325695866|gb|EGD37757.1| hypothetical protein HMPREF9384_1754 [Streptococcus sanguinis
SK160]
Length = 162
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGIAFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA E++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMDDF--KVQVGADRIRMASLESLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 NEERMTFHPNTNEKTIFISTQDLFKFLQDLG 154
>gi|399216545|emb|CCF73232.1| unnamed protein product [Babesia microti strain RI]
Length = 672
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVG-NIGGGLSKNLFLKDKKHRFYIVSALA 64
+ L A+L+ + I F +Y H V T + Y+ + G KNL L+D R Y+VS L
Sbjct: 2 ESLYAKLRAMGITFKEYYHMPVPTSKDAVNYLPPELFDGFLKNLCLRDSSKRAYLVSTLW 61
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
DTK+D+K LS+ L K LR A + + L GS++P +L+N++ +V ++ D+
Sbjct: 62 DTKIDIKSLSKILKAPK--LRFAEIDYLTNSLGTIPGSLSPLSLMNDTNNEVQMVFDEAI 119
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
K + HP D +I L ND+ KFL G +P +V+
Sbjct: 120 KDKTEIVVHPFCCDRTIKLTMNDMMKFLSDCGHEPIFVN 158
>gi|408376235|ref|ZP_11173840.1| hypothetical protein QWE_01550 [Agrobacterium albertimagni AOL15]
gi|407749702|gb|EKF61213.1| hypothetical protein QWE_01550 [Agrobacterium albertimagni AOL15]
Length = 167
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A + + L L +L I HP V TV I GG +KNLF+KDKK F++++
Sbjct: 4 AKTAEDLFRFLDELGIAHKTKTHPPVFTVAESVSMRDEIPGGHTKNLFVKDKKDNFFLLT 63
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ VD+K + +G + E ++E L V GSVT F +N++ ++V +LD
Sbjct: 64 VEENASVDLKTVHTIIG-AASKVSFGKPEKLMEYLGVAPGSVTAFGAINDTGKNVTFVLD 122
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
K + HPLSND + S+ +DL +F+++ G P
Sbjct: 123 KDLMEHDIINCHPLSNDATTSIGRDDLIRFMEATGHTP 160
>gi|424787610|ref|ZP_18214374.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Streptococcus intermedius BA1]
gi|422113364|gb|EKU17102.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Streptococcus intermedius BA1]
Length = 162
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 DLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T +L KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTNLLKFLEAIGYEPHIIEL 162
>gi|409439458|ref|ZP_11266507.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408748834|emb|CCM77688.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 169
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L A L L I+ S H V TV I GG +KNLF+KDKK +F++++
Sbjct: 8 TRDDLFAFLDGLDIKHSTKNHAPVFTVAESVALRDEIPGGHTKNLFVKDKKDQFFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + R+G + E ++E L V G+VT F +N++ +V +LD
Sbjct: 68 ENATVDLKTVHTRIG-AASKVSFGKPEKLMEYLGVVPGAVTAFGAINDTGGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMEEMIINCHPLSNDATTSIASADLIRFMEATGHKP 162
>gi|422870806|ref|ZP_16917299.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1087]
gi|328946363|gb|EGG40505.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1087]
Length = 162
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLFEKMQLPPGTVSPFGLLNNEEKDIHVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL +FL+ +G
Sbjct: 124 NEERMSFHPNTNEKTIFISTTDLFRFLQDLG 154
>gi|422823477|ref|ZP_16871665.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK405]
gi|422858355|ref|ZP_16905005.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1057]
gi|324992804|gb|EGC24724.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK405]
gi|327460241|gb|EGF06578.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1057]
Length = 162
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLFEKMQLPPGTVSPFGLLNNEEKDIHVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 NEERMTFHPNTNEKTIFVSTTDLFKFLQDLG 154
>gi|422855419|ref|ZP_16902077.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1]
gi|422862424|ref|ZP_16909056.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK408]
gi|422865396|ref|ZP_16912021.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1058]
gi|327462549|gb|EGF08873.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1]
gi|327474407|gb|EGF19813.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK408]
gi|327489790|gb|EGF21580.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1058]
Length = 162
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGIAFDVVEHPPAFTTEQADGYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLFEKMQLPPGTVSPFGLLNNEEKDIHVYFDKEII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ER FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 DEERMTFHPNTNEKTIFVSTTDLFKFLQDLG 154
>gi|148379480|ref|YP_001254021.1| hypothetical protein CBO1509 [Clostridium botulinum A str. ATCC
3502]
gi|153931130|ref|YP_001383857.1| hypothetical protein CLB_1531 [Clostridium botulinum A str. ATCC
19397]
gi|153934970|ref|YP_001387407.1| hypothetical protein CLC_1543 [Clostridium botulinum A str. Hall]
gi|226948843|ref|YP_002803934.1| hypothetical protein CLM_1745 [Clostridium botulinum A2 str. Kyoto]
gi|148288964|emb|CAL83051.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152927174|gb|ABS32674.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152930884|gb|ABS36383.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
gi|226842024|gb|ACO84690.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 163
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ + L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYSILDELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF ++N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGIINNSDKKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
LDK K + FHP +N +++++ D KFL+ G +
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGNE 157
>gi|407976790|ref|ZP_11157686.1| YbaK/prolyl-tRNA synthetase associated protein [Nitratireductor
indicus C115]
gi|407427689|gb|EKF40377.1| YbaK/prolyl-tRNA synthetase associated protein [Nitratireductor
indicus C115]
Length = 165
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + ++LL LK L IE H + TV G I GG +KNLFLKDKK F++V
Sbjct: 1 MPKTPEELLDFLKSLGIETKTRRHAPLFTVADSQSLRGEIAGGHTKNLFLKDKKDNFFLV 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D VD+K + ++G G + E ++E+L V GSVT F +N+ V ++L
Sbjct: 61 TVDEDATVDLKTIHHKIG-ASGRVSFGKPEALMELLGVAPGSVTVFGAINDVQGRVKVVL 119
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
D+ + HPL+N+ + S+ DL FL +P
Sbjct: 120 DESLMENDIINGHPLTNEATTSIGRGDLLCFLSETHHEP 158
>gi|430005504|emb|CCF21305.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium sp.]
Length = 173
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + A L L I H V TV I GG +KNLF+KDKK R+++++
Sbjct: 12 TPEAFYAFLDKLGIAHKTKTHAPVFTVAESVSLRDEIPGGHTKNLFVKDKKDRYFVLTVE 71
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + + +G G + E M+E L V GSVT F +N++A +V +LD+
Sbjct: 72 ENATVDLKAVHKVIG-ASGRVSFGRPEKMMEYLGVMPGSVTVFGAINDTAGNVTFVLDED 130
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + S++ +DL +FL++ G P
Sbjct: 131 LMKHELINGHPLSNDATTSVSRDDLLRFLEATGHTP 166
>gi|319947164|ref|ZP_08021398.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus australis ATCC 700641]
gi|417920301|ref|ZP_12563813.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
australis ATCC 700641]
gi|319747212|gb|EFV99471.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus australis ATCC 700641]
gi|342829952|gb|EGU64293.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
australis ATCC 700641]
Length = 163
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VD 69
RL L I F EHP +T E Y+ + G +K++FL +KK Y + + D K +D
Sbjct: 10 RLDQLGINFDVVEHPPALTTEQADSYIEGLEGVRTKSMFLTNKKKTQYYLLIMDDQKPLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M+ ++G + +RMA E++ E +++P G+V+PF L+N +D+ + D+ ++E
Sbjct: 70 MEDFKDQVGANR--IRMASTESLAEKMQLPAGTVSPFGLLNNENKDILVYFDQDIVSEEI 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSI 155
FHP +N+ +I + T DL +FL+SI
Sbjct: 128 MTFHPNTNEKTIFIKTQDLFRFLESI 153
>gi|170757685|ref|YP_001781144.1| hypothetical protein CLD_3044 [Clostridium botulinum B1 str. Okra]
gi|169122897|gb|ACA46733.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 163
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYNILDELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINNSDKKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
LDK K + FHP +N +++++ D KFL+ G +
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGNE 157
>gi|403220552|dbj|BAM38685.1| prolyl-tRNA synthetase [Theileria orientalis strain Shintoku]
Length = 705
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 5 KDQLLARL-KDLQIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
K +LL +L L + + +HP +++V+ + + I +NLF+ D R+Y++S
Sbjct: 4 KAELLYKLFHKLGLRYKVVKHPKLVSVKDMLEEPSLSLIKDDFIRNLFMLDSSKRYYLIS 63
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AL DT+V+ K+L + L + K L M E M +L V GS++PF ++N++ V +L D
Sbjct: 64 ALHDTEVNWKILRKTLKVNK--LHMGEESEMESLLGVSRGSLSPFCVMNDTENKVDVLFD 121
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K + + HPL+ND S+ +N D+ KFL + P +V L
Sbjct: 122 IRLKNKNQVVAHPLTNDESVVMNMEDMLKFLSEMNHKPKFVAL 164
>gi|306828519|ref|ZP_07461714.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus mitis ATCC 6249]
gi|304429318|gb|EFM32403.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus mitis ATCC 6249]
Length = 162
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L L I F EH +T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEILNGLDIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLL 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM +L + +G + +RMA E++ E + +P G V+PF L+N + +D+ +
Sbjct: 61 IMDDQKRLDMDLLKELIGANR--IRMASSESLFEKMSLPAGVVSPFGLLNNTDKDIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK +++R FHP +N+ ++ L+T DL +FL+++G + ++L
Sbjct: 119 DKEIMSEKRMSFHPNTNEKTLFLDTVDLLRFLEALGYESHIIEL 162
>gi|153940723|ref|YP_001390854.1| hypothetical protein CLI_1590 [Clostridium botulinum F str.
Langeland]
gi|384461905|ref|YP_005674500.1| hypothetical protein CBF_1570 [Clostridium botulinum F str. 230613]
gi|152936619|gb|ABS42117.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295318922|gb|ADF99299.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 163
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYNILNELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGSIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINNSDKKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
LDK K + FHP +N +++++ D KFL+ G +
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGNE 157
>gi|326388305|ref|ZP_08209908.1| YbaK/prolyl-tRNA synthetase associated region [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207471|gb|EGD58285.1| YbaK/prolyl-tRNA synthetase associated region [Novosphingobium
nitrogenifigens DSM 19370]
Length = 170
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+++L A L+ L I ++ EH AV TVE G + G +KNLFLKD +++V+
Sbjct: 9 EERLYADLQSLGITWTALEHEAVFTVEESEAIHGALPGAHTKNLFLKDSARGYFLVTVDH 68
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+VD+K L+ +G K L E M +L V GSVTP A +N+ V ++LD+
Sbjct: 69 AVRVDLKALAPVIGAKK--LSFGKAEDMESLLGVTPGSVTPLAAINDGEGKVQVVLDERL 126
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPL N +I + DL + L G DP
Sbjct: 127 AGAEAVHVHPLRNTATIGFSGADLVRALAHWGHDP 161
>gi|440228284|ref|YP_007335375.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium tropici
CIAT 899]
gi|440039795|gb|AGB72829.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium tropici
CIAT 899]
Length = 169
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L L L I + +H V TV I GG +KNLFLKDKK F++++
Sbjct: 8 TRDDLFRFLDGLGIAHTTKDHAPVFTVAESVSLRDEIPGGHTKNLFLKDKKDNFFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G + E ++E L V GSVT F +N++ +V +LD
Sbjct: 68 ENATVDLKTVHTLIG-AASKVSFGKPEKLMEYLGVIPGSVTAFGAINDAGNNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A + HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMAHDTVNCHPLSNDATTSIASGDLLRFMEATGHAP 162
>gi|451818494|ref|YP_007454695.1| prolyl-tRNA editing protein ProX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784473|gb|AGF55441.1| prolyl-tRNA editing protein ProX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 166
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L+I++ +YEH + TVE K NI G KNLFL++ K + + L D K V++
Sbjct: 13 LKALEIKYIRYEHEPLYTVEDTKKLDINITGQHCKNLFLRNSKGNVHYLVLLDDAKKVNL 72
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L++++ K L A EE + + L + GSVTPF ++N+ +V +L+DK +
Sbjct: 73 KDLAKQIESTK--LSFASEERLYKYLGLRPGSVTPFGIINDIESEVIVLIDKDITKADVV 130
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N +I L+ +DL+KF+K G YVD+
Sbjct: 131 NFHPNVNTATIGLSYSDLEKFIKWHGNKVYYVDI 164
>gi|319939290|ref|ZP_08013653.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus anginosus 1_2_62CV]
gi|319811686|gb|EFW07962.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus anginosus 1_2_62CV]
Length = 162
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K + M
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLGM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 NLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++IG +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIGYEPHIIEL 162
>gi|407004412|gb|EKE20804.1| YbaK/prolyl-tRNA synthetase associated region [uncultured
bacterium]
Length = 160
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK---KHRFYIVSALADTKV 68
LKDL I F +Y HPAV TVE + G+I G KNLFL++K KH +I A D +
Sbjct: 8 LKDLGISFKEYNHPAVFTVEEALLHKGDIDGAKIKNLFLRNKKGDKHFLFITDAFKD--I 65
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQ 127
D+K LS+ K G A E + + LK+ GSV+PF ++N+ +++V +LLDK
Sbjct: 66 DLKKLSEVTMERKLGF--ASPERLQKYLKLTPGSVSPFGIINDESKEVTILLDKELLYNN 123
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ FHP N +I ++ +D KFL G + +++
Sbjct: 124 DKLNFHPNINTSTIQISKDDFFKFLHWAGNEVREIEI 160
>gi|375254081|ref|YP_005013248.1| YbaK/proline--tRNA ligase associated domain-containing protein
[Tannerella forsythia ATCC 43037]
gi|363406425|gb|AEW20111.1| YbaK/proline--tRNA ligase associated domain protein [Tannerella
forsythia ATCC 43037]
Length = 165
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALAD 65
+L A L+ L I+F EHP T+E +Y KNLF ++ K + Y+V D
Sbjct: 6 RLYALLEQLGIKFEYLEHPPAPTIEIAKQYWAGHDAKHCKNLFFRNHKGNCHYLVILDCD 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+D+ + +RLG GK L A E+ M++ L V GSVTPF L+++ V + LD+ +
Sbjct: 66 CAMDIHAIEKRLGQGK--LTFASEKRMVKFLGVTPGSVTPFGLIHDETHHVHVFLDRNLQ 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
R FHP N S+ L+ +D +F+ + ++DL
Sbjct: 124 KASRLSFHPCINTASLILSNSDFMRFMDHVQNTYEWIDL 162
>gi|423070504|ref|ZP_17059280.1| hypothetical protein HMPREF9177_00597 [Streptococcus intermedius
F0413]
gi|355365865|gb|EHG13585.1| hypothetical protein HMPREF9177_00597 [Streptococcus intermedius
F0413]
Length = 162
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + +G K +RMA +++ E + +P G V+PF L+N +D+ + DK +++R
Sbjct: 71 DLFKELVGANK--IRMASSDSLFEKMMLPAGVVSPFGLLNNVDKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++I +P ++L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIDYEPHIIEL 162
>gi|420243147|ref|ZP_14747108.1| hypothetical protein PMI07_04911 [Rhizobium sp. CF080]
gi|398063506|gb|EJL55234.1| hypothetical protein PMI07_04911 [Rhizobium sp. CF080]
Length = 169
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L L I S HP V TV I GG +KNLF+KDKK ++++++
Sbjct: 8 TAEDLFRFLDSLDIPHSTKTHPPVFTVAESESLRDEIPGGHTKNLFVKDKKDQYFVLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + + +G + E +L+ L V GSVT F N++ R+V +LD+
Sbjct: 68 ERATVDLKTVHKVIG-ASSRVSFGRPEMLLDYLGVVPGSVTVFGAFNDTGRNVTFVLDED 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + S+ +NDL +FL++ G P
Sbjct: 127 LMKHDIINGHPLSNDATTSIASNDLIRFLEATGHAP 162
>gi|339641384|ref|ZP_08662828.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 056 str. F0418]
gi|339454653|gb|EGP67268.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 056 str. F0418]
Length = 164
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALA 64
++++ +LK+L I F EH +T E ++ I G +K++FL +KK +FY++
Sbjct: 5 EKVVEKLKELDIPFELVEHEPALTTEQADAFIEGIEGVRTKSMFLTNKKKTQFYLLIMDD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+DM + + + + +RMA +++ + +++P G+V+PF L+N +D+ + DK
Sbjct: 65 KKTLDMDLFKELVSANR--IRMASTDSLSDKMQLPAGTVSPFGLLNNKEKDIQVYFDKNI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ER FHP +N+ +I + T+DL KFL++IG V+L +
Sbjct: 123 IDEERMSFHPNTNEKTIFVATSDLFKFLQAIGYSYEVVELHS 164
>gi|386867124|ref|YP_006280118.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|385701207|gb|AFI63155.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. animalis ATCC 25527]
Length = 168
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGN-IGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
L +L I++++ HPAV T+EA A++V I G KNLFL ++K +Y+V D + D+
Sbjct: 11 LDELGIDYTEVTHPAVTTMEA-AQFVKTLIDGTPIKNLFLTNRKGNYYLVLMSEDRRADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+Q +G G+ L A + + +L + GSVTP AL+N++ + V +L+D Q R
Sbjct: 70 KALAQIIGTGR--LSFANADELRRVLNLEPGSVTPLALINDADQQVEVLVDTALAGQ-RL 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP +N ++SL DL F+ G D ++
Sbjct: 127 LMHPNTNTKTVSLEYEDLLGFIGHTGHDYRFI 158
>gi|187779842|ref|ZP_02996315.1| hypothetical protein CLOSPO_03438 [Clostridium sporogenes ATCC
15579]
gi|187773467|gb|EDU37269.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sporogenes ATCC 15579]
Length = 163
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ L +L I++ ++EH AV T++ +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYNILDELNIKYIKHEHEAVYTIKEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLMNNSDKKVKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
LDK K + FHP +N +++++ D KFL+ G + V++
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYEDFYKFLQWTGNEIKEVNI 163
>gi|146084156|ref|XP_001464941.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
infantum JPCM5]
gi|134069036|emb|CAM67181.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
infantum JPCM5]
Length = 722
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALA 64
+LLA LK+L IE H + TVE K +G G +KN+FLK +K +++A+
Sbjct: 11 ELLALLKELNIELPTISHGEMHTVEEANKELGRFGTPCVGTKNMFLKSRKGELVLLTAVH 70
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKG 123
TK DM + + G LR AP E + + L V G VTPFAL+N R+V +LLDK
Sbjct: 71 TTKTDMHAIEK--AAGTKNLRFAPAEILSDNLAVVQGCVTPFALINNIEKRNVTVLLDKN 128
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
K F HP ND S + L++FL+ +G VD A A
Sbjct: 129 LKESPIPFVLHPCRNDKSSLVVFEQLERFLEKLGYAYKLVDFGAASA 175
>gi|337282155|ref|YP_004621626.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus parasanguinis ATCC 15912]
gi|335369748|gb|AEH55698.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus parasanguinis ATCC 15912]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVKEKLDELGISFDVVEHPPAFTTEQADSYIEGLEGVRTKTMFLTNKKKTQYYLLIMDDQ 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM +++ + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KPLDMDDFKEQVEANR--IRMASADSLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL+SIG
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLESIG 154
>gi|358463978|ref|ZP_09173950.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 058 str. F0407]
gi|357067565|gb|EHI77672.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 058 str. F0407]
Length = 162
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L L I F EH +T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEMLNGLDIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLV 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM +L +G + +RMA E++ E + +P G V+PF L+N + + + +
Sbjct: 61 IMDDKKRLDMDLLKDVVGANR--IRMASSESLFEKMMLPAGVVSPFGLLNNTDKGIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK +++R FHP +N+ ++ L+T D+ KFL++IG + ++L
Sbjct: 119 DKEIMSEKRMSFHPNTNEKTLFLDTTDILKFLEAIGYEAHIIEL 162
>gi|71032103|ref|XP_765693.1| prolyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68352650|gb|EAN33410.1| prolyl-tRNA synthetase, putative [Theileria parva]
Length = 683
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
D+L L + + +HP ++TV+ + + +NLF+ D R+Y++SAL
Sbjct: 7 DKLFKLFHTLGLRYKVIKHPNLVTVKDMLEEPSLAGFRDDCIRNLFMLDSSKRYYLISAL 66
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
DT+V+ KVL + L + K L M E ML +L V G++TPF+ +N++ V +L D
Sbjct: 67 YDTEVNWKVLRKSLNVNK--LHMGDESDMLSLLGVGRGNLTPFSAMNDTENKVHVLFDIR 124
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K + HPL+ND S+ + D+ KFL I P ++ L
Sbjct: 125 LKNKVDVVAHPLTNDQSVVMKMEDMLKFLTQINHFPTFLPL 165
>gi|34498155|ref|NP_902370.1| hypothetical protein CV_2700 [Chromobacterium violaceum ATCC 12472]
gi|34104010|gb|AAQ60370.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 166
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L + Q+ + ++EHP V T E A+ + ++ G KNLFL D K R ++V+ AD VD+
Sbjct: 9 LDEQQVRYQRFEHPPVYTCEEAARLIPDLPGAECKNLFLCDAKGRRHFLVAVPADAGVDI 68
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L + L GLR A E + + L + GSVT A VN+ + V +++D+ +E
Sbjct: 69 KALGE--ALEAKGLRFASPERLKKYLGLEPGSVTLLAAVNDREQQVEVVVDEALWTREAI 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
HPL N ++S+ DL + L G P + + P
Sbjct: 127 LCHPLVNTATLSVPLEDLARLLAHTGHTPRVIAVPQKP 164
>gi|417793119|ref|ZP_12440404.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
oralis SK255]
gi|334274117|gb|EGL92445.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
oralis SK255]
Length = 163
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q++ +L++L+I F EHP V T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVVNKLQELKIAFDVVEHPPVFTTEQADSYIKGMEGVRTKSMFLTNRKKTQYYLLIMGDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMN--DFKVQVGADRIRMASLDSLAEKMNLPAGTVSPFGLLNNEEKDILVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I + DL +FL SIG
Sbjct: 124 SEDVMTFHPNTNEKTIFIKIQDLFQFLDSIG 154
>gi|398013889|ref|XP_003860136.1| prolyl-tRNA synthetase, putative, partial [Leishmania donovani]
gi|322498355|emb|CBZ33429.1| prolyl-tRNA synthetase, putative, partial [Leishmania donovani]
Length = 225
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALA 64
+LLA LK+L IE H + TVE K +G G +KN+FLK +K +++A+
Sbjct: 11 ELLALLKELNIELPTISHGEMHTVEEANKELGRFGTPCVGTKNMFLKSRKGELVLLTAVH 70
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKG 123
TK DM + + G LR AP E + + L V G VTPFAL+N R+V +LLDK
Sbjct: 71 TTKTDMHAIEK--AAGTKNLRFAPAEILSDNLAVVQGCVTPFALINNIEKRNVTVLLDKN 128
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
K F HP ND S + L++FL+ +G VD A A
Sbjct: 129 LKESPIPFVLHPCRNDKSSLVVFEQLERFLEKLGYAYKLVDFGAASA 175
>gi|170761775|ref|YP_001786930.1| hypothetical protein CLK_0988 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408764|gb|ACA57175.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 163
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ + L +L I++ +++H AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYSILNELNIKYIKHDHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N S + V +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINNSDKKVNVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
LDK K + FHP +N +++++ D KFL+
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQ 152
>gi|378827803|ref|YP_005190535.1| hypothetical protein SFHH103_03218 [Sinorhizobium fredii HH103]
gi|365180855|emb|CCE97710.1| conserved hypothetical protein [Sinorhizobium fredii HH103]
Length = 169
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 8 TAEDLFRFLDELGIEHQTKRHQPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K++ Q +G + E ++E L V G+VT F +N+++ V +LD+G
Sbjct: 68 EHATVDLKIIHQTIG-AASKVSFGKPEKLMEYLGVIPGAVTAFGAINDTSGKVKFILDEG 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HPLSND + S+ D+ +F+++ G +P + + A
Sbjct: 127 LMEFDTINCHPLSNDQTTSIAAKDMLRFMEATGHEPLVLKVTA 169
>gi|225868992|ref|YP_002744940.1| hypothetical protein SZO_14270 [Streptococcus equi subsp.
zooepidemicus]
gi|225702268|emb|CAX00036.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus]
Length = 162
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTK-VD 69
LK L I++ EH +T E +++ I G +K +FL KK+ FY+V + DTK +D
Sbjct: 11 LKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKNHFYLV-IMDDTKRLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + +G + ++MA E +L +++P G V+PF L+N +D+ + +DK + R
Sbjct: 70 MNRFKELVG--EKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEAR 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +ND +I + T+DL KFL +IG VDL
Sbjct: 128 MSFHPNTNDKTIFIQTDDLFKFLAAIGYAVNIVDL 162
>gi|322385596|ref|ZP_08059240.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus cristatus ATCC 51100]
gi|417921118|ref|ZP_12564613.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
cristatus ATCC 51100]
gi|321270334|gb|EFX53250.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus cristatus ATCC 51100]
gi|342835038|gb|EGU69296.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
cristatus ATCC 51100]
Length = 162
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E +Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADRYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDQ 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + +RMA +++ E +++P G+V+PF L+N RD+ + DK
Sbjct: 66 KSLDMDLFKDLVSANR--IRMASADSLYEKMQLPPGTVSPFGLLNNPERDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+++ FHP +N+ +I + T D+ KFL +G D ++L
Sbjct: 124 SEDIMTFHPNTNEKTIFVATQDIFKFLTHLGYDYQILEL 162
>gi|401419292|ref|XP_003874136.1| putative prolyl-tRNA synthetase, putative,bifunctional
aminoacyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490370|emb|CBZ25630.1| putative prolyl-tRNA synthetase, putative,bifunctional
aminoacyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 715
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSA 62
+ +LLA LK+L IE H + TVE + + G +KN+FLK KK +++A
Sbjct: 9 ESELLAALKELNIELPTISHGEMHTVEEANRELARFGTPCVGTKNMFLKSKKGELVLLTA 68
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLD 121
+ TK DM + + G LR AP E + E L V GSVTPFAL+N R+V +LLD
Sbjct: 69 VHTTKTDMHAIEK--AAGTKNLRFAPAEILSENLAVVQGSVTPFALINNIEKRNVTVLLD 126
Query: 122 KGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+ K F HP ND S + L++FL+ +G VD A A
Sbjct: 127 QNLKDSPIPFVLHPCRNDKSSLVVFEQLERFLEKLGYAYKLVDFGAASA 175
>gi|422758064|ref|ZP_16811826.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
gi|322410899|gb|EFY01807.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 162
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+ ++ LK L I + EH +T E ++ I G +K +FL +KK Y + + D
Sbjct: 5 ENIITELKKLNIPYELVEHEPALTTEQADSFIEGIEGLRTKTMFLTNKKKTQYYLLIMDD 64
Query: 66 TK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K +DM+ + +G + +RMA +++ + + +P G V+PF L+N +D+ + D+
Sbjct: 65 QKMLDMENFKELVGANR--IRMASADSLYQKMLLPPGVVSPFGLINNQDKDILVYFDQEI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +ND +I +NT DL FLK +G + ++L
Sbjct: 123 VTEERMSFHPNTNDRTIFINTKDLFSFLKHLGYEVNIIEL 162
>gi|406670155|ref|ZP_11077408.1| hypothetical protein HMPREF9707_01311 [Facklamia ignava CCUG 37419]
gi|405579928|gb|EKB54010.1| hypothetical protein HMPREF9707_01311 [Facklamia ignava CCUG 37419]
Length = 169
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADT 66
LL L I + EHP V T+EA + G +KNLF++D KK R+ +++ + D
Sbjct: 6 LLEWLDQEGISYELVEHPVVETMEALNQVEQRYPGYQAKNLFVRDDKKQRYLLITVMEDQ 65
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VDMK L + L + L A + + +ILK+ GSVTPF L+N+ V +LD+ + A
Sbjct: 66 TVDMKKLRRELETRR--LSFASADDLAQILKLTPGSVTPFGLLNDQEHRVEFVLDQDYLA 123
Query: 127 QERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
E+ HP ND ++ +NTNDL L G +D +A
Sbjct: 124 GEQVLGIHPNHNDATVWINTNDLLTLLDQHGTTIHVLDFDA 164
>gi|421490628|ref|ZP_15937999.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK1138]
gi|400372889|gb|EJP25825.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK1138]
Length = 162
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + + + +RMA +++ E + +P G V+PF L+N + +D+ + DK +++R
Sbjct: 71 DLFKELVKANR--IRMASSDSLFEKMMLPAGVVSPFGLLNNADKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ LNT DL KFL++IG + ++L
Sbjct: 129 SFHPNTNEKTLFLNTTDLLKFLEAIGYEAHIIEL 162
>gi|315221344|ref|ZP_07863265.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Streptococcus anginosus F0211]
gi|315189463|gb|EFU23157.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Streptococcus anginosus F0211]
Length = 162
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + + + +RMA +++ E + +P G V+PF L+N + +D+ + DK +++R
Sbjct: 71 DLFKELVKANR--IRMASSDSLFEKMMLPAGVVSPFGLLNNADKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ LNT DL KFL++IG + ++L
Sbjct: 129 SFHPNTNEKTLFLNTTDLLKFLEAIGYEAHIIEL 162
>gi|226498392|ref|NP_001147898.1| bifunctional aminoacyl-tRNA synthetase [Zea mays]
gi|195614460|gb|ACG29060.1| bifunctional aminoacyl-tRNA synthetase [Zea mays]
Length = 693
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
+LK L IE+ + H A M + ++ L KN+F +DKK + +++SA DT ++
Sbjct: 14 QLKQLNIEYILHNHEACMNIADLQQHTKLNHAPLIKNIFSEDKKGQCFLISARHDTIIE- 72
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV-ALLLDKGFKAQER 129
+ ++LG RMA E + +L V GSVTPF L N++ + V A LD+ +E
Sbjct: 73 RAFYKKLGTSYSNCRMAKPEVLQAVLGVAPGSVTPFGLANDTEKKVKAFALDENLLKEEW 132
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
FHPL N +I + D K+L SI R P ++L V
Sbjct: 133 LSFHPLVNTQTIEIKREDFVKWLASIDRKPEVLNLSEKEEV 173
>gi|399991290|ref|YP_006571530.1| hypothetical protein PGA1_c00650 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398655845|gb|AFO89811.1| hypothetical protein PGA1_c00650 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 175
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVE-AQAKYVGNIGGGLS----KNLFLKDKKHRFY 58
S DQLLA+L I F + H + TVE A+A G + G KNL+L+DKK R +
Sbjct: 14 SSDQLLAQLDAWGISFRLHSHVPLRTVEDAKAVEAGFMQAGERALRLKNLYLRDKKKRNH 73
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+VS D VD+K L+ LGLGK L + +LE L V G+VTP A+VN +DV
Sbjct: 74 LVSLEQDRDVDLKALAADLGLGK--LSFGSADRLLETLGVRPGAVTPLAMVNGVNQDVHF 131
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+DK + + + HPL ND +++L FL+ + R
Sbjct: 132 YMDKAAQQADVIYMHPLVNDRTVALTRQ---AFLEVMDR 167
>gi|225870004|ref|YP_002745951.1| hypothetical protein SEQ_0594 [Streptococcus equi subsp. equi 4047]
gi|225699408|emb|CAW92876.1| conserved hypothetical protein [Streptococcus equi subsp. equi
4047]
Length = 162
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I++ EH +T E +++ I G +K +FL +K + + + DTK +DM
Sbjct: 11 LKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKNHFYLIIMDDTKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +G + ++MA E +L +++P G V+PF L+N +D+ + +DK + R
Sbjct: 71 NRFKELVG--EKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEARM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +ND +I + T+DL KFL +IG VDL
Sbjct: 129 SFHPNTNDKTIFIQTDDLFKFLAAIGYAVNIVDL 162
>gi|414563511|ref|YP_006042472.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338846576|gb|AEJ24788.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 170
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I++ EH +T E +++ I G +K +FL +K + + + DTK +DM
Sbjct: 19 LKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKTHFYLIIMDDTKRLDM 78
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +G + ++MA E +L +++P G V+PF L+N +D+ + +DK + R
Sbjct: 79 NRFKELVG--EKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEARM 136
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +ND +I + T+DL KFL +IG VDL
Sbjct: 137 SFHPNTNDKTIFIQTDDLFKFLAAIGYAVNIVDL 170
>gi|422851521|ref|ZP_16898191.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK150]
gi|325694648|gb|EGD36556.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK150]
Length = 156
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLHELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++G + +RMA ++ E + +P G+V+PF L+N RD+ + DK
Sbjct: 66 KRLDMDDFKVKVGADR--IRMASLASLAEKMNLPAGTVSPFGLINNEERDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFISTRDLFKFLQDLG 154
>gi|335032279|ref|ZP_08525682.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK52 = DSM 20563]
gi|333767451|gb|EGL44692.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK52 = DSM 20563]
Length = 162
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + + + +RMA +++ E + +P G V+PF L+N + +D+ + DK +++R
Sbjct: 71 DLFKELVKANR--IRMASADSLFEKMMLPAGVVSPFGLLNNADKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ LNT DL KFL++IG + ++L
Sbjct: 129 SFHPNTNEKTLFLNTTDLLKFLEAIGYEAHIIEL 162
>gi|417917159|ref|ZP_12560721.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis SK236]
gi|342830808|gb|EGU65133.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis SK236]
Length = 163
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
Q+ +L++L IEF EHP T E Y+ + G +K++FL +KK +FY++
Sbjct: 6 QVKDKLEELGIEFDVVEHPPAFTTEQADSYIEGLEGVRTKSMFLTNKKKTQFYLLIMDDK 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+DM +++ + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDDFKEQVEANR--IRMASADSLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL+SI
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLESIS 154
>gi|195977703|ref|YP_002122947.1| hypothetical protein Sez_0565 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974408|gb|ACG61934.1| hypothetical protein Sez_0565 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 170
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTK-VD 69
LK L I++ EH +T E +++ I G +K +FL KK+ FY+V + DTK +D
Sbjct: 19 LKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKNHFYLV-IMDDTKRLD 77
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + +G + ++MA E +L +++P G V+PF L+N +D+ + +DK + R
Sbjct: 78 MNRFKELVG--EKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEAR 135
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +ND +I + T+DL +FL +IG VDL
Sbjct: 136 MSFHPNTNDKTIFIQTDDLFRFLAAIGYAVNIVDL 170
>gi|418937503|ref|ZP_13491132.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium sp.
PDO1-076]
gi|375055761|gb|EHS51992.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium sp.
PDO1-076]
Length = 178
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A + + L L +L I+ HP V TV I GG +KNLF+KDKK +F++++
Sbjct: 15 AKTAEDLFRFLDELNIQHKTKTHPPVFTVAESVSLRDEIPGGHTKNLFVKDKKDQFFLLT 74
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ VD+K + +G + E +++ L V GSVT F +N++ V +LD
Sbjct: 75 VEENAVVDLKTVHTIIG-AASKVSFGKPEKLMDYLGVAPGSVTAFGAINDTGNKVTFVLD 133
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HPLSND + S+ + DL +F+++ G P + + A
Sbjct: 134 ADLMKHDIINGHPLSNDATTSIGSQDLLRFIEATGHQPLVLKVTA 178
>gi|153855568|ref|ZP_01996684.1| hypothetical protein DORLON_02702 [Dorea longicatena DSM 13814]
gi|149751989|gb|EDM61920.1| YbaK/proline--tRNA ligase associated domain protein [Dorea
longicatena DSM 13814]
Length = 163
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K ++ L + I++ EH V T+E + G L KNLFL+D K R ++
Sbjct: 1 MEDQKQRVYDALNKMGIKYEVVEHEPVHTMEDMDRLGLPEKGTLCKNLFLRDSKGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
++A TKVD+K L ++LG G L A EE + + L V GSVTPFAL+N++ V
Sbjct: 61 ITADEKTKVDLKALGRQLG--AGTLSFASEERLEKYLGVKQGSVTPFALMNDTEHAVEFF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+DK + HPL N ++ ++ DLDKFL ++ D + L
Sbjct: 119 IDKNLSRCKSMGIHPLENTATVFISFKDLDKFLWNLDVDVVKIKL 163
>gi|399039719|ref|ZP_10735228.1| hypothetical protein PMI09_02777 [Rhizobium sp. CF122]
gi|398062132|gb|EJL53913.1| hypothetical protein PMI09_02777 [Rhizobium sp. CF122]
Length = 169
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L A L L I+ S H V TV I GG +KNLF+KDKK +F++++
Sbjct: 8 TRDDLFAFLDGLDIKHSTKSHAPVFTVAESVALRDEIPGGHTKNLFVKDKKDQFFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G + E ++E L V G+VT F +N++ +V +LD
Sbjct: 68 ENAAVDLKTVHTLIG-AASKVSFGKPEKLMEYLGVVPGAVTAFGAINDTGGNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
HPLSND + S+ ++DL +F+++ G P
Sbjct: 127 LMEDAIINCHPLSNDATTSIASSDLIRFMEATGHKP 162
>gi|254418159|ref|ZP_05031883.1| hypothetical protein BBAL3_469 [Brevundimonas sp. BAL3]
gi|196184336|gb|EDX79312.1| hypothetical protein BBAL3_469 [Brevundimonas sp. BAL3]
Length = 175
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
A+ ++ L A L + + + ++HPAV VE + G +KNLFLKD K R +++S
Sbjct: 10 AFDRETLTAWLAEHGVAHTTHDHPAVFRVEEGLDLKAGLPGAHTKNLFLKDHKGRLWLIS 69
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A DT +D+K + +G G+ L E M E L V GSVT L+N+ R V +LD
Sbjct: 70 ARQDTVIDLKRAAAAMGAGR--LSFGNEALMWETLGVRPGSVTALGLINDVERRVTFVLD 127
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ + FHPL+N + SL + L R+P VD A
Sbjct: 128 RRLWDADIVNFHPLTNTATTSLEQAAFRRVLAVWEREPIVVDFGA 172
>gi|422876300|ref|ZP_16922770.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1056]
gi|332361108|gb|EGJ38912.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus sanguinis SK1056]
Length = 162
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADGYIEGMEGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLYEKMQLPPGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFLK +G
Sbjct: 124 SEDIMTFHPNTNEKTIFISTEDLFKFLKDLG 154
>gi|312866671|ref|ZP_07726885.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis F0405]
gi|311097752|gb|EFQ55982.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parasanguinis F0405]
Length = 163
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVKEKLDELGISFDVVEHPPAFTTEQADSYIEGLEGVRTKTMFLTNKKKTQYYLLIMDDQ 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM +++ + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KPLDMDDFKEQVEANR--IRMASADSLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL++IG
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLEAIG 154
>gi|157150296|ref|YP_001450137.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075090|gb|ABV09773.1| YbaK / prolyl-tRNA synthetases associated domain, putative
[Streptococcus gordonii str. Challis substr. CH1]
Length = 162
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVANKLQELGIAFDVVEHPPAFTTEQADSYIEGMEGVRTKTMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASADSLYEKMQLPPGTVSPFGLLNNEEKDIQVYFDKDII 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFISTTDLFKFLQDLG 154
>gi|329847421|ref|ZP_08262449.1| ybaK / prolyl-tRNA synthetase associated domain protein
[Asticcacaulis biprosthecum C19]
gi|328842484|gb|EGF92053.1| ybaK / prolyl-tRNA synthetase associated domain protein
[Asticcacaulis biprosthecum C19]
Length = 176
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
Y+ ++LL L DL ++ S H AV V + + G +KNLFLKD K + +++SA
Sbjct: 12 YTPEKLLKALDDLGLKTSTLWHEAVFRVGEGDEIKAALPGAHTKNLFLKDDKGQLWLISA 71
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
T++ +K L + +G G+ L EE + L V GSVT LVN+ V +LDK
Sbjct: 72 EQTTQIQLKTLPKTIGSGR--LSFGSEERLYNALGVRPGSVTALGLVNDPDLRVRFILDK 129
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ FHPL+N + +L+ D +F++ +GR+ VD
Sbjct: 130 TLFDADIVNFHPLTNTATTALSQADFRRFVEWLGRELVVVDF 171
>gi|359413798|ref|ZP_09206263.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium sp.
DL-VIII]
gi|357172682|gb|EHJ00857.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium sp.
DL-VIII]
Length = 165
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L+I++++YEH A+ TV+ + +I G KNLF++++K + + L D+
Sbjct: 8 KLYGILDSLEIKYTRYEHEAIYTVQEANRLEISIPGAHCKNLFIRNRKGDIHYLVLLDDS 67
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K D+K+L +++ K L A EE + + L + G+VTPF L+N+ +V +L+D+
Sbjct: 68 KRADLKLLEKQIESTK--LSFASEERLFKYLGLKPGAVTPFGLINDINSEVIVLVDRDLI 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N +I ++ NDL+KF+K + YVD+
Sbjct: 126 DASIVNFHPNVNTATIGVSYNDLEKFIKWHNNEFYYVDI 164
>gi|418405337|ref|ZP_12978737.1| hypothetical protein SM0020_34343 [Sinorhizobium meliloti
CCNWSX0020]
gi|359500706|gb|EHK73368.1| hypothetical protein SM0020_34343 [Sinorhizobium meliloti
CCNWSX0020]
Length = 224
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 63 TAEDLFRFLDELGIEHRTKRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 122
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + + ++E L V G+VT F +N++ V ++LD+
Sbjct: 123 EHATVDLKTVHQTIG-AASKVSFGKPDKLMEYLGVIPGAVTAFGAINDTEGKVKIILDET 181
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A E HPLSND + S+ + D+ +F+++ G +P + + A
Sbjct: 182 LMAFETINCHPLSNDQTTSIASKDMLRFMEATGHEPLVLKVTA 224
>gi|227823707|ref|YP_002827680.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
gi|227342709|gb|ACP26927.1| hypothetical protein with YbaK/prolyl-tRNA synthetase associated
region [Sinorhizobium fredii NGR234]
Length = 180
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 19 TAEDLFRFLDELGIEHQTKRHQPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 78
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + E ++E L V G+VT F +N+++ V +LD+G
Sbjct: 79 EHATVDLKTIHQTIG-AASKVSFGKPEKLMEYLGVIPGAVTAFGAINDTSGRVKFILDEG 137
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HPLSND + S+ D+ +F+++ G +P + + A
Sbjct: 138 LMEFDTINCHPLSNDQTTSIAAKDMLRFMEATGHEPLVLKVTA 180
>gi|168182437|ref|ZP_02617101.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237794846|ref|YP_002862398.1| hypothetical protein CLJ_B1611 [Clostridium botulinum Ba4 str. 657]
gi|182674409|gb|EDT86370.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229262312|gb|ACQ53345.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 163
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++++ + L +L I++ +++H AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGREKIYSILDELNIKYIKHDHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L+N+ + + +L
Sbjct: 61 LILCDEKMADLKALAKEIG--STPLSMASEERLYKHLGLTPGSVTPFGLINDYDKKIKVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
LDK K + FHP +N +++++ D KFL+ G +
Sbjct: 119 LDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGNE 157
>gi|15891247|ref|NP_356919.1| hypothetical protein Atu3699 [Agrobacterium fabrum str. C58]
gi|15159614|gb|AAK89704.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 169
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L I + +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 11 ELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENA 70
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VD+K + + +G + E MLE L V GSVT F +N++AR V +LD
Sbjct: 71 VVDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTARQVTFVLDSDLLE 129
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ + DL +FL++ G P
Sbjct: 130 NELVNGHPLSNDQTTTIASKDLIRFLEATGHAP 162
>gi|422860015|ref|ZP_16906659.1| hypothetical protein HMPREF9386_0524 [Streptococcus sanguinis
SK330]
gi|327470898|gb|EGF16354.1| hypothetical protein HMPREF9386_0524 [Streptococcus sanguinis
SK330]
Length = 162
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S Q+ +L++L I F EHP T E Y+ + G +K++FL ++K Y + +
Sbjct: 3 SYQQVANKLQELGIAFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNRKKTQYYLLIM 62
Query: 64 ADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D K +DM ++G + +RMA ++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 63 DDKKRLDMNDFKVKVGADR--IRMASLASLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDK 120
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFLK +G
Sbjct: 121 DIVSEDIMTFHPNTNEKTIFISTEDLFKFLKDLG 154
>gi|49259589|pdb|1VKI|A Chain A, Crystal Structure Of A Putative Oligo-Nucleotide Binding
Protein (Atu3699, Agr_l_2275) From Agrobacterium
Tumefaciens Str. C58 At 1.60 A Resolution
gi|49259590|pdb|1VKI|B Chain B, Crystal Structure Of A Putative Oligo-Nucleotide Binding
Protein (Atu3699, Agr_l_2275) From Agrobacterium
Tumefaciens Str. C58 At 1.60 A Resolution
Length = 181
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L I + +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 23 ELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENA 82
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VD+K + + +G + E MLE L V GSVT F +N++AR V +LD
Sbjct: 83 VVDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTARQVTFVLDSDLLE 141
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ + DL +FL++ G P
Sbjct: 142 NELVNGHPLSNDQTTTIASKDLIRFLEATGHAP 174
>gi|254292400|ref|YP_003058423.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Hirschia baltica ATCC 49814]
gi|254040931|gb|ACT57726.1| YbaK/prolyl-tRNA synthetase associated region [Hirschia baltica
ATCC 49814]
Length = 187
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVL--- 73
I++S H TV + I GG +KNLFLKDKK + ++SA A T++ + L
Sbjct: 39 IKYSTETHLPTHTVAESSILKSEISGGHTKNLFLKDKKGQLVLISAWAHTEIRLNQLHKL 98
Query: 74 --SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
SQRL K L + E LKV GSV+ FAL++++ V L D+ E
Sbjct: 99 IESQRLSFAKPQL-------LWETLKVTAGSVSAFALMHDTQNRVRFLADEKLLDFEMLN 151
Query: 132 FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHPL NDM+ S++ +F++S GR ++D
Sbjct: 152 FHPLRNDMTTSISQKGFARFIESTGRGLEWIDF 184
>gi|56698074|ref|YP_168445.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
gi|56679811|gb|AAV96477.1| YbaK/prolyl-tRNA synthetase domain protein [Ruegeria pomeroyi
DSS-3]
Length = 187
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG-----GGLSKNLFLKDKKHRFY 58
S D LL +L D + + Y H + TVE G + KNL+L+DKK R Y
Sbjct: 20 SSDALLGQLDDWGLAYRLYTHVPLRTVEDAKAVEGELTRPGERAFRIKNLYLRDKKKRNY 79
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V+ D VD+K L + LG G L + +++ L + G+V+P A++ ++V L
Sbjct: 80 LVTLEQDRAVDLKALG--VALGAGNLSFGSSDRLMQHLGIRPGAVSPLAMITGVGQEVRL 137
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
++D + E + HPL ND ++++ DL FL+ IG + ++D
Sbjct: 138 IMDAAAREAEVIYMHPLVNDRTVAMARADLLAFLERIGCEVTWLD 182
>gi|406968592|gb|EKD93406.1| YbaK/prolyl-tRNA synthetase associated region [uncultured
bacterium]
Length = 159
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK---HRFYIVSALA 64
+L LK L I ++ +EHP + T E + G I G +KNLFL+++K H IVS+
Sbjct: 4 VLTALKTLNIPYALHEHPPLFTCEDAEAFYGKIPAGSNKNLFLRNRKGDQHYLLIVSS-- 61
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K D+K +++ +G+ L A E +++ L + GSV+PF L+++ A + +L+D+
Sbjct: 62 TKKADLKKIAE--AIGESQLGFASPERLMKYLHLTPGSVSPFGLIHDIAHHILVLIDEDL 119
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
+R FHP N ++ L D ++FL
Sbjct: 120 WTHDRLLFHPNQNTSTVELARTDFERFL 147
>gi|403370968|gb|EJY85356.1| Prolyl-tRNA synthetase, putative [Oxytricha trifallax]
Length = 712
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 17 IEFSQYEHPAVMTVEA---QAKYVGNIGGGL-SKNLFL--KDKKHRFYIVSALADTKVDM 70
I F+ H AV TV+ + K+ G + +KNLFL K KK + Y+V A DT++DM
Sbjct: 25 ISFNTIRHEAVATVKEGLEKVKFEGEYADSVFAKNLFLANKKKKDQIYLVVAAHDTEIDM 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+ G G LR E+ M ++L V GSV F+++N++ + + L+LD+ +R
Sbjct: 85 KALTTHFKAGSGNLRGGDEQVMEDLLGVKKGSVNLFSILNDTGKKIHLVLDQRLVDAKRV 144
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP+ ND + S+ + D K + P +D
Sbjct: 145 AFHPMQNDATTSITSADALKIAELADHKPEIIDF 178
>gi|262037503|ref|ZP_06010962.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Leptotrichia goodfellowii F0264]
gi|261748433|gb|EEY35813.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Leptotrichia goodfellowii F0264]
Length = 169
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALA 64
+++ +L +L I F EHPA T E KYV I G L+K+LFL DKK +Y++
Sbjct: 11 EKVYEKLNELNISFEIVEHPAATTTEEADKYVEGIEGVLTKSLFLTNDKKTAYYLLIMDD 70
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+DM + +G + L+ A +++ + +K+ G V+ F L+N +D+ L D
Sbjct: 71 HNKLDMNEFKEIVGAKR--LKFASSDSLYKKMKLQPGVVSIFGLLNNPEKDIKLYFDTKI 128
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
++R FHP N +I ++ ND+ KF+K+IG + V E
Sbjct: 129 LKEKRISFHPNDNTKTIFISINDMLKFIKNIGFEYEEVKFE 169
>gi|387879729|ref|YP_006310032.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus parasanguinis FW213]
gi|386793180|gb|AFJ26215.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus parasanguinis FW213]
Length = 163
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVKEKLDELGISFDVVEHPPAFTTEQADSYIEGLEGVRTKTMFLTNKKKTQYYLLIMDDQ 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM +++ + +RMA +++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KPLDMDDFKEQVEANR--IRMASADSLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL+ IG
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLEVIG 154
>gi|418962884|ref|ZP_13514733.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|383344860|gb|EID23010.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 162
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I F EH +T E ++ I G +K +FL +KK Y + + D K +DM
Sbjct: 11 LNKLNIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYLLIMDDKKRLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ + + + +RMA +++ E + +P G V+PF L+N + +D+ + DK +++R
Sbjct: 71 DLFKELVKANR--IRMASADSLFEKMMLPAGVVSPFGLLNNADKDIQVYFDKEIMSEKRM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ ++ L+T DL KFL++IG + V+L
Sbjct: 129 SFHPNTNEKTLFLDTTDLLKFLEAIGYEAHIVEL 162
>gi|398379192|ref|ZP_10537333.1| hypothetical protein PMI03_02956 [Rhizobium sp. AP16]
gi|397723308|gb|EJK83812.1| hypothetical protein PMI03_02956 [Rhizobium sp. AP16]
Length = 169
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L L L I S +H V TV I GG +KNLF+KDKK F++++
Sbjct: 8 TRDDLFRFLDGLGISHSTKDHAPVFTVAESVSLRDEIPGGHTKNLFVKDKKDNFFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G + E ++E L V GSVT F +N+ +V +LD
Sbjct: 68 ENASVDLKTVHTLIG-AASKVSFGKPENLMEYLGVIPGSVTAFGAINDKGGNVTFVLDAE 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMEHDIVNCHPLSNDATTSIASGDLLRFMEATGHTP 162
>gi|417860836|ref|ZP_12505891.1| Crystal Structure Of A Putative Oligo-Nucleotide Binding Protein
[Agrobacterium tumefaciens F2]
gi|338821240|gb|EGP55209.1| Crystal Structure Of A Putative Oligo-Nucleotide Binding Protein
[Agrobacterium tumefaciens F2]
Length = 169
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L A L L I + EH V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 12 LFAFLDGLGIAHTTKEHEPVYTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENAV 71
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K + + +G + E MLE L V GSVT F +N+S +V +LD
Sbjct: 72 VDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDSGGEVTFVLDSDLLEN 130
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ DL +FL++ G P
Sbjct: 131 ELINGHPLSNDQTTTIGNRDLIRFLEATGHTP 162
>gi|224063114|ref|XP_002300998.1| predicted protein [Populus trichocarpa]
gi|222842724|gb|EEE80271.1| predicted protein [Populus trichocarpa]
Length = 127
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 23/132 (17%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M ++KDQLLARLK+LQI+FSQYEHP V TVEA+ KYVG+ GGGL K LFLK Y+
Sbjct: 1 MGFTKDQLLARLKELQIDFSQYEHPTVSTVEAREKYVGDKGGGLCKILFLK-----CYLG 55
Query: 61 SALADTKVDMKVLSQR-----------LGLGKGGLRMAPEETMLE-------ILKVPLGS 102
+ + +V +L + L L P E + PLG
Sbjct: 56 GLVWEKEVQEWLLKKHWVRYFRNKLDSLSLAILIWCNVPTADTYEGNHIHDCVAMFPLGC 115
Query: 103 VTPFALVNESAR 114
VTPFAL NESA+
Sbjct: 116 VTPFALPNESAQ 127
>gi|222150130|ref|YP_002551087.1| hypothetical protein Avi_4247 [Agrobacterium vitis S4]
gi|221737112|gb|ACM38075.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 169
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S L A L L IE HP V TV I GG +KNLF+KDKK +F+++
Sbjct: 8 STADLFACLDSLGIEHRTVSHPPVFTVAESVSLRDEIPGGHTKNLFVKDKKDQFFLLVVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + LG + E ++E L V GSVT F +N++ V +LD
Sbjct: 68 ENAIVDLKTVHILLG-AASKVSFGKPEKLMEYLGVVPGSVTAFGAMNDTGNKVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
E HPLSND + S+ +DL +FL + G + + + A
Sbjct: 127 LMQHEIINCHPLSNDATTSIGRDDLLRFLMATGHEALVLKVTA 169
>gi|313884230|ref|ZP_07817996.1| YbaK/proline--tRNA ligase associated domain protein [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620677|gb|EFR32100.1| YbaK/proline--tRNA ligase associated domain protein [Eremococcus
coleocola ACS-139-V-Col8]
Length = 162
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALA 64
D+++ +LK+L I++ EH +T E ++ I G +K +FL +KK + FY++
Sbjct: 5 DKVIDKLKELGIQYQLVEHEPALTTEQADLFIEGIEGVRTKTMFLTNKKKKNFYLLIMDD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
++DM ++ + K ++MA E+++ E + +P G V+PF L+N D+ + DK
Sbjct: 65 GKRLDMNRFAEIVEEKK--MKMASEDSLFEKMALPAGVVSPFGLLNNEDHDIQVFFDKEI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +N+ +I + T DL KF+++IG +++
Sbjct: 123 VDEERMSFHPNTNEKTIFVATPDLFKFIEAIGYQTNVIEI 162
>gi|150398238|ref|YP_001328705.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Sinorhizobium medicae WSM419]
gi|150029753|gb|ABR61870.1| YbaK/prolyl-tRNA synthetase associated region [Sinorhizobium
medicae WSM419]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 8 TAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + E ++E L V G+VT F +N++ V ++LD+
Sbjct: 68 EHATVDLKAVHQIIG-AASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVKIILDET 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A + HPLSND + S+ + D+ +F+++ G +P + + A
Sbjct: 127 LMAFDTINCHPLSNDQTTSIASKDMLRFMEATGHEPLVLKVTA 169
>gi|325282227|ref|YP_004254769.1| YbaK/prolyl-tRNA synthetase associated region [Odoribacter
splanchnicus DSM 20712]
gi|324314036|gb|ADY34589.1| YbaK/prolyl-tRNA synthetase associated region [Odoribacter
splanchnicus DSM 20712]
Length = 164
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M ++++ LK L IEF EHP T+E +Y N+ KNLF ++ K +R Y+
Sbjct: 1 MMIGQEKVYETLKALGIEFDYLEHPEAPTIEIARQYWKNLDSTHCKNLFFRNHKGNRHYL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D + + L Q L GK L A E+ M + L + GSV+PF LVN++ V +
Sbjct: 61 VIFHCDRNLAIHDLEQLLKQGK--LSFASEKRMEKYLGLKPGSVSPFGLVNDTEHHVYVF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
LD+ K + FHP N S+++ T D +++ G ++ L
Sbjct: 119 LDENLKQARKLSFHPNDNRASLAIKTEDFIRYMDQTGNGYEWIRL 163
>gi|222087565|ref|YP_002546102.1| hypothetical protein Arad_4462 [Agrobacterium radiobacter K84]
gi|221725013|gb|ACM28169.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D L L L I S +H V TV I GG +KNLF+KDKK F++++
Sbjct: 8 TRDDLFRFLDGLGISHSTKDHAPVFTVAESVSLRDEIPGGHTKNLFVKDKKDNFFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G + E ++E L V GSVT F +N+ +V +LD
Sbjct: 68 ENASVDLKTVHTLIG-AASKVSFGKPEKLMEYLGVIPGSVTAFGAINDKGGNVTFVLDAE 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMEHDIVNCHPLSNDATTSIASGDLLRFMEATGHTP 162
>gi|421488058|ref|ZP_15935453.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
oralis SK304]
gi|400369219|gb|EJP22221.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
oralis SK304]
Length = 162
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K ++ L L I F EH +T E ++ I G +K +FL +KK Y +
Sbjct: 3 AYEK--VVEMLNGLDIPFEIVEHEPALTTEQADSFIEGIEGVRTKTMFLTNKKKTAYYL- 59
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ D K + + + LG +RMA E++ E + +P G V+PF L+N + +D+ + D
Sbjct: 60 VIMDDKKRLDMDLLKDLLGANRIRMASSESLFEKMMLPAGVVSPFGLLNNADKDIQVYFD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K +++R FHP +N+ ++ L+T D+ KFL++IG + ++L
Sbjct: 120 KEIMSEKRMSFHPNTNEKTLFLDTKDILKFLEAIGYEAHIIEL 162
>gi|422884087|ref|ZP_16930536.1| hypothetical protein HMPREF9380_1185 [Streptococcus sanguinis SK49]
gi|332362185|gb|EGJ39987.1| hypothetical protein HMPREF9380_1185 [Streptococcus sanguinis SK49]
Length = 162
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K +FL ++K Y + + D
Sbjct: 6 QVANKLQELGIAFDVVEHPPAFTTEQADSYIEGMEGVRTKTMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMDDF--KVQVGANRIRMASLDSLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTRDLFKFLQDLG 154
>gi|422882392|ref|ZP_16928848.1| hypothetical protein HMPREF9389_1817 [Streptococcus sanguinis
SK355]
gi|332359621|gb|EGJ37438.1| hypothetical protein HMPREF9389_1817 [Streptococcus sanguinis
SK355]
Length = 162
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKTMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + D+
Sbjct: 66 KRLDMDDF--KVQVGADRIRMASLDSLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDRDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTRDLFKFLQDLG 154
>gi|414155697|ref|ZP_11412007.1| hypothetical protein HMPREF9186_00427 [Streptococcus sp. F0442]
gi|410872632|gb|EKS20573.1| hypothetical protein HMPREF9186_00427 [Streptococcus sp. F0442]
Length = 163
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
Q+ +L++L I+F EHP T + Y+ + G +K++FL +KK +FY++
Sbjct: 6 QVKDKLEELGIKFDVVEHPPAFTTKQADSYIEGLEGVRTKSMFLTNKKKTQFYLLIMDDK 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+DM +++ + +RMA E++ E +++P G+V+PF L+N +D+ + DK
Sbjct: 66 KPLDMDDFKEQVEANR--IRMASAESLAEKMQLPPGTVSPFGLLNNEEKDIRVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
++E FHP +N+ +I + T DL +FL+SI
Sbjct: 124 SEEIMTFHPNTNEKTIFIKTQDLFRFLESIS 154
>gi|405377369|ref|ZP_11031312.1| hypothetical protein PMI11_01274 [Rhizobium sp. CF142]
gi|397326182|gb|EJJ30504.1| hypothetical protein PMI11_01274 [Rhizobium sp. CF142]
Length = 169
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ LLA L L I S +H V TV I GG +KNLF+KDKK R+++++
Sbjct: 8 TRQDLLAFLDGLGIIHSTKDHAPVFTVAESVALRDEIPGGHTKNLFVKDKKDRYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + +G G + E ++E L V G+VT +N++ +V +LD
Sbjct: 68 ENAAVDLKQVHTLIG-ASGRVSFGKPEKLMEYLGVIPGAVTALGAINDAGNNVTFVLDAD 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + S+ + DL +F+++ G P
Sbjct: 127 LMHDDIINCHPLSNDATTSIASADLIRFMEATGHKP 162
>gi|149184956|ref|ZP_01863273.1| YbaK/prolyl-tRNA synthetase associated region [Erythrobacter sp.
SD-21]
gi|148831067|gb|EDL49501.1| YbaK/prolyl-tRNA synthetase associated region [Erythrobacter sp.
SD-21]
Length = 167
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L A LK L I F +EH AV TVE I G +KNLFLKD F++V+ A+
Sbjct: 9 LRADLKALAIPFEHHEHEAVFTVEESRGVKEAIPGAHTKNLFLKDVGGVFWLVTVPAEMG 68
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K L + +G + + M +L + GSVTP ++ ++ ++LD+
Sbjct: 69 VDLKALPEAIGCKR--VSFGKPHDMERLLGLTPGSVTPLGAIHAEPGNITVVLDRSLAEA 126
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
+R HPL N +I L+ D + ++ G P D+ A
Sbjct: 127 DRINVHPLRNTATIGLSGADTLRLIEHWGHAPVIADIPAQ 166
>gi|418298610|ref|ZP_12910448.1| hypothetical protein ATCR1_13828 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536523|gb|EHH05796.1| hypothetical protein ATCR1_13828 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 169
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L I + +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 11 ELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENA 70
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VD+K + + +G + E MLE L V GSVT F +N++ R V +LD
Sbjct: 71 AVDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTDRQVTFVLDSDLLE 129
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ + DL +FL++ G P
Sbjct: 130 NELVNGHPLSNDQTTTIASKDLIRFLEATGHAP 162
>gi|323351479|ref|ZP_08087133.1| hypothetical protein HMPREF9398_1181 [Streptococcus sanguinis
VMC66]
gi|422821144|ref|ZP_16869337.1| hypothetical protein HMPREF9388_0604 [Streptococcus sanguinis
SK353]
gi|322121965|gb|EFX93691.1| hypothetical protein HMPREF9398_1181 [Streptococcus sanguinis
VMC66]
gi|324991058|gb|EGC22992.1| hypothetical protein HMPREF9388_0604 [Streptococcus sanguinis
SK353]
Length = 162
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L +L I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLHELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA ++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMNDF--KIQVGADRIRMASLNSLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTTDLFKFLHDLG 154
>gi|332716431|ref|YP_004443897.1| hypothetical protein AGROH133_11981 [Agrobacterium sp. H13-3]
gi|325063116|gb|ADY66806.1| hypothetical protein AGROH133_11981 [Agrobacterium sp. H13-3]
Length = 169
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L A L L IE +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 12 LFAFLDGLGIEHKTKQHEPVYTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENAV 71
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K + + +G + E MLE L V GSVT F +N++ V +LD
Sbjct: 72 VDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTGGQVTFVLDSDLLEN 130
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ DL +FL++ G P
Sbjct: 131 ELINGHPLSNDQTTTIGNKDLIRFLEATGHTP 162
>gi|418406028|ref|ZP_12979348.1| hypothetical protein AT5A_02360 [Agrobacterium tumefaciens 5A]
gi|358007941|gb|EHK00264.1| hypothetical protein AT5A_02360 [Agrobacterium tumefaciens 5A]
Length = 204
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L A L L IE +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 47 LFAFLDGLGIEHKTKQHEPVYTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENAV 106
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K + + +G + E MLE L V GSVT F +N++ V +LD
Sbjct: 107 VDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTGGQVTFVLDSDLLEN 165
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ DL +FL++ G P
Sbjct: 166 ELINGHPLSNDQTTTIGNKDLIRFLEATGHTP 197
>gi|157867949|ref|XP_001682528.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68125982|emb|CAJ04056.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
Length = 731
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALA 64
+LLA LK+L IE H + TVE + + G +KN+FLK KK +++A+
Sbjct: 11 ELLALLKELNIELPTISHGEMHTVEEANRELVQFGTPCVGTKNMFLKSKKGELVLLTAVH 70
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKG 123
TK DM + + G LR AP E + E L V G VTPFAL+N +V +LLDK
Sbjct: 71 TTKTDMHAIEK--AAGTRNLRFAPAEILSENLAVVQGCVTPFALINNIEKHNVTVLLDKN 128
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
K F HP ND S + L++FL+ +G VD A A
Sbjct: 129 LKDSPIPFVLHPCRNDKSSLVVFEQLERFLEKVGYAYKLVDFGAASA 175
>gi|421513913|ref|ZP_15960651.1| aminoacyl-tRNA editing enzyme [Enterococcus faecalis ATCC 29212]
gi|401672986|gb|EJS79406.1| aminoacyl-tRNA editing enzyme [Enterococcus faecalis ATCC 29212]
Length = 162
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-V 68
+L + +I F +HP +T E ++ I G +K++FL +KK Y + + D K +
Sbjct: 9 TKLNEFKIPFEIVDHPPALTTEEADSFIEGIEGVRTKSMFLTNKKKTAYYLLIMDDQKRL 68
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
DM L + G + ++MA E +++E +K+P G V+ F L+N D+ + D+ +
Sbjct: 69 DMDKLKEITG--EKRIKMASENSLMEKMKLPAGVVSIFGLLNNDENDIHVYFDREITQEP 126
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
R FHP N +I L+TND+ KFL++I + + +D+
Sbjct: 127 RMSFHPNVNTKTIFLDTNDIFKFLENIDYNYSIIDI 162
>gi|342184838|emb|CCC94320.1| putative prolyl-tRNA synthetase [Trypanosoma congolense IL3000]
Length = 784
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALA 64
+LL L+ L E H TVE K +G G +KNLFLK K +V+AL
Sbjct: 80 ELLRVLQGLGFELPTISHEEKHTVEEANKELGRFGVPCIGTKNLFLKSSKGELVLVTALH 139
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+TK +MK + L LR A E + E L V GSVTPFALVN SA+DV ++LDK
Sbjct: 140 NTKTNMKSVQN--ALKTKDLRFATAELLHEKLGVVQGSVTPFALVNNSAKDVMVVLDKAL 197
Query: 125 -KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL-EANPA 169
++ HP ND S + L+ FLK I VD ++ PA
Sbjct: 198 VESNLPIVLHPCRNDKSSLITPVQLEGFLKCINFSYTVVDFSDSTPA 244
>gi|307277391|ref|ZP_07558486.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecalis TX2134]
gi|306505927|gb|EFM75102.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecalis TX2134]
Length = 165
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-V 68
+L + +I F +HP +T E ++ I G +K++FL +KK Y + + D K +
Sbjct: 12 TKLNEFKIPFEIVDHPPALTTEEADSFIEGIEGVRTKSMFLTNKKKTAYYLLIMDDQKRL 71
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
DM L + G + ++MA E +++E +K+P G V+ F L+N D+ + D+ +
Sbjct: 72 DMDKLKEITG--EKRIKMASENSLMEKMKLPAGVVSIFGLLNNDENDIHVYFDREITQEP 129
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
R FHP N +I L+TND+ KFL++I + + +D+
Sbjct: 130 RMSFHPNVNTKTIFLDTNDIFKFLENIDYNYSIIDI 165
>gi|422848587|ref|ZP_16895263.1| hypothetical protein HMPREF9382_0565 [Streptococcus sanguinis
SK115]
gi|325690629|gb|EGD32632.1| hypothetical protein HMPREF9382_0565 [Streptococcus sanguinis
SK115]
Length = 162
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L+I F EHP T E Y+ + G +K++FL +KK Y + + D
Sbjct: 6 QVANKLQELRITFDVVEHPPAFTTEQADSYIEGMEGVRTKSMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E + + G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMNLFKELVSANR--IRMASLDSLAEKMSLSAGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFISTTDLFKFLEDLG 154
>gi|125718098|ref|YP_001035231.1| hypothetical protein SSA_1280 [Streptococcus sanguinis SK36]
gi|125498015|gb|ABN44681.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 162
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E + Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQEDGYIEGMEGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA ++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASLNSLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTTDLFKFLHDLG 154
>gi|384191232|ref|YP_005576980.1| DNA-binding protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192378|ref|YP_005578125.1| Proline--tRNA ligase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
gi|289178724|gb|ADC85970.1| DNA-binding protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|340365115|gb|AEK30406.1| Proline--tRNA ligase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
Length = 175
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGN-IGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
L +L I++++ HPAV T+EA A++V I G KNLFL ++K +Y+V D + D+
Sbjct: 28 LDELGIDYTEVTHPAVTTMEA-AQFVRTLIDGTPIKNLFLTNRKGNYYLVLMSEDRRADL 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+Q +G G+ L A + + +L + GSVTP AL+N++ + V +L+D Q R
Sbjct: 87 KALAQIIGTGR--LSFANADDLRRVLNLEPGSVTPLALINDADQQVEVLVDTALAGQ-RL 143
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP +N ++S DL +F+ G ++
Sbjct: 144 LMHPNTNTKAMSPEYGDLLRFIGHTGHGYRFI 175
>gi|408784854|ref|ZP_11196604.1| hypothetical protein C241_00185 [Rhizobium lupini HPC(L)]
gi|424912415|ref|ZP_18335792.1| hypothetical protein Rleg13DRAFT_04678 [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392848446|gb|EJB00969.1| hypothetical protein Rleg13DRAFT_04678 [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408489193|gb|EKJ97497.1| hypothetical protein C241_00185 [Rhizobium lupini HPC(L)]
Length = 169
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L I + +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 11 ELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENA 70
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VD+K + + +G + E MLE L V GSVT F +N++ R V +LD
Sbjct: 71 VVDLKSVHKIIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTDRQVTFVLDSALLE 129
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
E HPLSND + ++ + DL +FL++ G P
Sbjct: 130 NELVNGHPLSNDQTTTIASADLIRFLEATGHTP 162
>gi|398355501|ref|YP_006400965.1| hypothetical protein USDA257_c56960 [Sinorhizobium fredii USDA 257]
gi|390130827|gb|AFL54208.1| hypothetical protein USDA257_c56960 [Sinorhizobium fredii USDA 257]
Length = 169
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK ++++
Sbjct: 8 TAEDLFRFLDELGIEHRTKRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLIVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ VD+K + Q +G + E ++E L V G+VT +N+++ V +LD+G
Sbjct: 68 ENATVDLKTIHQTIG-AASKVSFGKPEKLMEYLGVIPGAVTALGAINDTSGKVKFILDEG 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ HPLSND + S+ D+ +F+++ G +P + + A
Sbjct: 127 LMEFDTINCHPLSNDQTTSIAAKDMLRFMEATGHEPLVLKVTA 169
>gi|254476072|ref|ZP_05089458.1| YbaK/prolyl-tRNA synthetase domain protein [Ruegeria sp. R11]
gi|214030315|gb|EEB71150.1| YbaK/prolyl-tRNA synthetase domain protein [Ruegeria sp. R11]
Length = 175
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYV-------GNIGGGLSKNLFLKDKKHR 56
S D LLA+L D I++ +EH + TVE AK V G + L KNL+L+DKK R
Sbjct: 14 SSDALLAQLDDWGIDYRLHEHVPLRTVE-DAKGVEDAFMAEGEVALRL-KNLYLRDKKKR 71
Query: 57 FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV 116
+++S D VD+K L LGLG L + +LE L V G+VTP A++N +V
Sbjct: 72 NHLISLEQDRDVDLKALGAELGLGN--LSFGSADRLLENLGVRPGAVTPLAMINGRDHNV 129
Query: 117 ALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+DK + + + HPL ND +I L + + +G + +V
Sbjct: 130 RFYMDKAAQNADSIYMHPLVNDRTIGLTRDAFFAVMDRLGVEIQWV 175
>gi|340057860|emb|CCC52211.1| putative prolyl-tRNA synthetase [Trypanosoma vivax Y486]
Length = 807
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALA 64
+LL L L + H TVE +G +KN+FLK KK +V+AL
Sbjct: 100 ELLQVLGALGFDLPTISHEEKHTVEEANMELGRFNQACVGTKNMFLKSKKGELVLVTALH 159
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
T+ +MK + +G + LR AP + ++E L V GSVTPFALVN SA+D+ ++LDK
Sbjct: 160 TTETNMKTIQNAVGTKE--LRFAPADLLMEKLGVVQGSVTPFALVNNSAKDIKVVLDKLL 217
Query: 125 KAQER-CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
E HP ND S+ + L +FLK I VD
Sbjct: 218 VESEVPIVVHPCRNDKSVLVTPQQLGEFLKKIDYTFTVVDF 258
>gi|154251767|ref|YP_001412591.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Parvibaculum lavamentivorans DS-1]
gi|154155717|gb|ABS62934.1| YbaK/prolyl-tRNA synthetase associated region [Parvibaculum
lavamentivorans DS-1]
Length = 182
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNI-----GGGLSKNLFLKDKKHRF 57
++ + LA L I H + TVE + + G KNLFLKDKK R
Sbjct: 11 HTGEAFLAWLDRAGIGHQTRHHAPLHTVEEAEAHRASWPDAEREGAFCKNLFLKDKKGRL 70
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
+++ L ++ + LS+ +G + L + + E+L V GSVTPFALVN+ V
Sbjct: 71 FLIVTLEAHELKLNRLSKPVGGAR--LSFGNADLLWEMLGVRPGSVTPFALVNDREGKVT 128
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
++LD ER +HPL N + +++ D KFL G +P +DL A
Sbjct: 129 VVLDAPMLEHERLHYHPLENTATTAISREDFIKFLALTGHEPLIIDLVA 177
>gi|417915905|ref|ZP_12559499.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. SK95]
gi|342831699|gb|EGU66010.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
mitis bv. 2 str. SK95]
Length = 163
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALAD 65
Q+ L++L I F EHP V T E Y+ + G +K++FL + KK ++Y++ + D
Sbjct: 6 QVANTLQELGITFDVVEHPPVFTTEQADSYIEGMEGVRTKSMFLTNRKKTQYYLL--IMD 63
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K + + ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 64 DKKRLDMYDFKVQVGADRIRMASLDSLAEKMTLPAGTVSPFGLLNNEEKDILVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+++ FHP +N+ +I + T DL +FL++I
Sbjct: 124 SEDIMTFHPNTNEKTIFIKTQDLFRFLEAI 153
>gi|103487319|ref|YP_616880.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Sphingopyxis alaskensis RB2256]
gi|98977396|gb|ABF53547.1| Ala-tRNA(Pro) hydrolase [Sphingopyxis alaskensis RB2256]
Length = 167
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
LLA L L I F+ +EH AV TV I G +KNLFLKD F++V+ ++ +
Sbjct: 7 LLADLDALAIPFAAHEHEAVFTVAESDAVNAAIPGAHTKNLFLKDSGGAFWLVTVPSEAR 66
Query: 68 VDMKVL-----SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
VD+K L S+R+ GK + M ++L + GSVTP A +N + + +++D
Sbjct: 67 VDLKALPAAIGSKRVSFGKA-------DAMEQLLGIAPGSVTPLAAINAAPGSITVVIDA 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A HPL N ++ L+ + L+ G DP
Sbjct: 120 RLAAAPIVNVHPLRNTGTLGLSGGSILDLLRHWGHDP 156
>gi|335033183|ref|ZP_08526552.1| hypothetical protein AGRO_0526 [Agrobacterium sp. ATCC 31749]
gi|333795360|gb|EGL66688.1| hypothetical protein AGRO_0526 [Agrobacterium sp. ATCC 31749]
Length = 169
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L L L I + +H V TV I GG +KNLF+KDKK ++++++ +
Sbjct: 11 ELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVKDKKDQYFVLTVEENA 70
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
VD+K + + +G + E MLE L V GSVT F +N++ R V +LD
Sbjct: 71 VVDLKSVHKTIG-AASRVSFGRPEKMLEYLGVVPGSVTVFGAINDTGRQVTFVLDSDLLE 129
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+ HPLSND + ++ + DL +FL++ G P
Sbjct: 130 NQLVNGHPLSNDQTTTIASKDLIRFLEATGHAP 162
>gi|183601518|ref|ZP_02962888.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis HN019]
gi|219683943|ref|YP_002470326.1| hypothetical protein BLA_1468 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190983|ref|YP_002968377.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196389|ref|YP_002969944.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384193976|ref|YP_005579722.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195541|ref|YP_005581286.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Bifidobacterium animalis subsp. lactis V9]
gi|387820850|ref|YP_006300893.1| aminoacyl-tRNA editing enzymes YbaK lik protein [Bifidobacterium
animalis subsp. lactis B420]
gi|387822524|ref|YP_006302473.1| aminoacyl-tRNA editing enzymes YbaK, ProX like protein
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679509|ref|ZP_17654385.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BS
01]
gi|183219124|gb|EDT89765.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis HN019]
gi|219621593|gb|ACL29750.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
lactis AD011]
gi|240249375|gb|ACS46315.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250943|gb|ACS47882.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793972|gb|ADG33507.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis V9]
gi|345282835|gb|AEN76689.1| YbaK/prolyl-tRNA synthetase associated region [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041153|gb|EHN17657.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BS
01]
gi|386653551|gb|AFJ16681.1| aminoacyl-tRNA editing enzymes YbaK lik protein [Bifidobacterium
animalis subsp. lactis B420]
gi|386655132|gb|AFJ18261.1| aminoacyl-tRNA editing enzymes YbaK, ProX like protein
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 159
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGN-IGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
L +L I++++ HPAV T+EA A++V I G KNLFL ++K +Y+V D + D+
Sbjct: 12 LDELGIDYTEVTHPAVTTMEA-AQFVRTLIDGTPIKNLFLTNRKGNYYLVLMSEDRRADL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+Q +G G+ L A + + +L + GSVTP AL+N++ + V +L+D Q R
Sbjct: 71 KALAQIIGTGR--LSFANADDLRRVLNLEPGSVTPLALINDADQQVEVLVDTALAGQ-RL 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP +N ++S DL +F+ G ++
Sbjct: 128 LMHPNTNTKAMSPEYGDLLRFIGHTGHGYRFI 159
>gi|83951203|ref|ZP_00959936.1| YbaK/prolyl-tRNA synthetase domain protein [Roseovarius nubinhibens
ISM]
gi|83839102|gb|EAP78398.1| YbaK/prolyl-tRNA synthetase domain protein [Roseovarius nubinhibens
ISM]
Length = 180
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNI---GGGLS--KNLFLKDKKH 55
+ S D++L L+ E + Y H + TVE G++ G G+ KN +L+D+K
Sbjct: 13 LPVSSDKMLDLLRAAGCEVTAYSHIPLRTVEDAKTVQGDVLPSGAGVVNIKNFYLRDRKK 72
Query: 56 RFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARD 115
R Y+V D +VD+K L ++G G E ++E L V G+V+P A+V +
Sbjct: 73 RNYLVVLEQDREVDLKALGAQIG--APGPSFGSPERLMEHLGVRPGAVSPLAMVTGAEMG 130
Query: 116 VALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
V L++D + E HPL ND ++++ +DL++ L+ G + +++L
Sbjct: 131 VTLVMDAALRQAEVVHLHPLVNDRTVAMTPDDLERVLRGWGAEIRWLEL 179
>gi|384537720|ref|YP_005721805.1| hypothetical protein SM11_chr3309 [Sinorhizobium meliloti SM11]
gi|336034612|gb|AEH80544.1| hypothetical protein SM11_chr3309 [Sinorhizobium meliloti SM11]
Length = 245
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 84 TAEDLFRFLDELGIEHRTKRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 143
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + + ++E L V G+VT F +N++ V ++LD+
Sbjct: 144 EHATVDLKTVHQTIG-AASKVSFGKPDKLMEYLGVIPGAVTAFGAINDTEGKVKIILDET 202
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A E H LSND + S+ + D+ +F+++ G +P + + A
Sbjct: 203 LMAFETINCHSLSNDRTTSIASKDMLRFMEATGHEPLVLKVTA 245
>gi|15966936|ref|NP_387289.1| hypothetical protein SMc03800 [Sinorhizobium meliloti 1021]
gi|15076209|emb|CAC47762.1| Hypothetical protein SMc03800 [Sinorhizobium meliloti 1021]
Length = 224
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 63 TAEDLFRFLDELGIEHRTKRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 122
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + + ++E L V G+VT F +N++ V ++LD+
Sbjct: 123 EHATVDLKTVHQTIG-AASKVSFGKPDKLMEYLGVIPGAVTAFGAINDTEGKVKIILDET 181
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A E H LSND + S+ + D+ +F+++ G +P + + A
Sbjct: 182 LMAFETINCHSLSNDRTTSIASKDMLRFMEATGHEPLVLKVTA 224
>gi|251781614|ref|YP_002995915.1| YbaK/prolyl-tRNA synthetases associated domain [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242390242|dbj|BAH80701.1| putative YbaK/prolyl-tRNA synthetases associated domain
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 162
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++ +L DL I F EH +T E ++ I G +K +FL +KK Y + + D K
Sbjct: 7 VIDKLTDLGIAFEVVEHEPALTTEQADSFIEGIDGVRTKTMFLTNKKKTQYYLLIMDDQK 66
Query: 68 -VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+DM + G + +RMA +++ + + +P G V+PF L+N +D+ + +D+ +
Sbjct: 67 QLDMDRFKELAGANR--IRMASADSLYDKMLLPPGVVSPFGLLNNRDKDILVYIDQDIMS 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++R FHP +N+ +I + T DL +F++S+G D ++L
Sbjct: 125 EKRMSFHPNTNEKTIFVETPDLVRFIESLGYDVHVINL 162
>gi|374384303|ref|ZP_09641829.1| hypothetical protein HMPREF9449_00215 [Odoribacter laneus YIT
12061]
gi|373228910|gb|EHP51213.1| hypothetical protein HMPREF9449_00215 [Odoribacter laneus YIT
12061]
Length = 170
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L I F EHPA T+E +Y N+ KNLF ++ K +R Y+V D + +
Sbjct: 13 LNALGITFDYLEHPAAPTIEIAKQYWTNLESTHCKNLFFRNHKGNRHYLVIFDCDQNLAI 72
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L L GK L A E+ M++ L + GSV+PF LVN++ V + LD+ K +
Sbjct: 73 HDLEHLLKQGK--LSFASEKRMVKYLGLYPGSVSPFGLVNDTEHHVYVFLDENLKKANKL 130
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N SI++ T D +++ + G ++ L
Sbjct: 131 SFHPNDNRASIAIKTEDFIRYMNATGNGYEWIKL 164
>gi|422846751|ref|ZP_16893434.1| hypothetical protein HMPREF9381_1093 [Streptococcus sanguinis SK72]
gi|325687559|gb|EGD29580.1| hypothetical protein HMPREF9381_1093 [Streptococcus sanguinis SK72]
Length = 162
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADGYIEGMEGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA ++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KSLDMDLFKELVSANR--IRMASLNSLAEKMNLPAGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTTDLFKFLHDLG 154
>gi|336394898|ref|ZP_08576297.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus farciminis KCTC 3681]
Length = 162
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALA 64
+Q+ ++L +L I + EHP V T+E KY+ G +K+LFL D KK R+Y+V
Sbjct: 5 EQVKSKLDELNISYDMVEHPPVYTMEEADKYIEGKVGIRTKSLFLTDNKKRRYYLVFMDD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D ++DMK + +G + L+ A E ++E L + G V+ F L+N + +DV + +K
Sbjct: 65 DKRLDMKQFGEIIG--EKHLKFASENLLMEKLGLKPGFVSIFGLLNNTQKDVQVYFEKDI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+ FHP N ++ + +DL KFL S+G
Sbjct: 123 VSDIPLTFHPNDNTKTMFIGMDDLKKFLNSLG 154
>gi|166032599|ref|ZP_02235428.1| hypothetical protein DORFOR_02314 [Dorea formicigenerans ATCC
27755]
gi|166026956|gb|EDR45713.1| YbaK/proline--tRNA ligase associated domain protein [Dorea
formicigenerans ATCC 27755]
Length = 202
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M+ K ++ L L I++ EH V T+E + G L KNLFL+D K R ++
Sbjct: 40 MSEQKQRVYDALNKLGIKYEVVEHEPVHTMEDMDRLGLPEKGTLCKNLFLRDAKGKRHFL 99
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
++ + KVD+K L ++LG G L A EE + + L + GSV+PF L+N++ V
Sbjct: 100 ITCDENAKVDLKSLGRQLG--AGNLSFASEERLEKYLGLKQGSVSPFGLMNDTDHAVEFF 157
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+DK + HPL N ++ L+ DLDKFL ++ D + L
Sbjct: 158 IDKNLSKCKSLGIHPLENTATVFLSFKDLDKFLWNLDVDVMKIKL 202
>gi|334317881|ref|YP_004550500.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Sinorhizobium meliloti AK83]
gi|384531005|ref|YP_005715093.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Sinorhizobium meliloti BL225C]
gi|407722192|ref|YP_006841854.1| hypothetical protein BN406_02983 [Sinorhizobium meliloti Rm41]
gi|433614955|ref|YP_007191753.1| hypothetical protein C770_GR4Chr3268 [Sinorhizobium meliloti GR4]
gi|333813181|gb|AEG05850.1| YbaK/prolyl-tRNA synthetase associated region [Sinorhizobium
meliloti BL225C]
gi|334096875|gb|AEG54886.1| YbaK/prolyl-tRNA synthetase associated region [Sinorhizobium
meliloti AK83]
gi|407320424|emb|CCM69028.1| hypothetical protein BN406_02983 [Sinorhizobium meliloti Rm41]
gi|429553145|gb|AGA08154.1| hypothetical protein C770_GR4Chr3268 [Sinorhizobium meliloti GR4]
Length = 169
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + L L +L IE H V TV I GG +KNLFLKDKK +++++
Sbjct: 8 TAEDLFRFLDELGIEHRTKRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVE 67
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K + Q +G + + ++E L V G+VT F +N++ V ++LD+
Sbjct: 68 EHATVDLKTVHQTIG-AASKVSFGKPDKLMEYLGVIPGAVTAFGAINDTEGKVKIILDET 126
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
A E H LSND + S+ + D+ +F+++ G +P + + A
Sbjct: 127 LMAFETINCHSLSNDRTTSIASKDMLRFMEATGHEPLVLKVTA 169
>gi|262282575|ref|ZP_06060343.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus sp. 2_1_36FAA]
gi|262261866|gb|EEY80564.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus sp. 2_1_36FAA]
Length = 162
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP T E Y+ + G +K +FL +KK Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPAFTTEQADSYIEGMEGVRTKTMFLTNKKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM + + + + +RMA +++ E +++ G+V+PF L+N +D+ + DK
Sbjct: 66 KNLDMDLFKELVSANR--IRMASADSLYEKMQLSPGTVSPFGLLNNEEKDIQVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I ++T DL KFL+ +G
Sbjct: 124 SEDIMTFHPNTNEKTIFVSTIDLFKFLQDLG 154
>gi|104774804|ref|YP_619784.1| hypothetical protein Ldb2202 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423885|emb|CAI98926.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 158
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
+L +L I++ EH +T E +++ I G +K LFL +KK R FY+V +++
Sbjct: 8 KLAELGIDYQLVEHAPALTTEQADEFIEGIPGVRTKTLFLTNKKKRNFYLVIMDDAKRLN 67
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + G K ++MA E+++ E + +P V+PF L+N + D+ + DK ++R
Sbjct: 68 MDKFKEIAG--KKQIKMASEKSLFEKMGLPSRVVSPFGLLNNADHDIQVYFDKEIVDEDR 125
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP +N+ +I + T DL KFLK++G
Sbjct: 126 MSFHPNTNEKTIFIKTEDLFKFLKNLG 152
>gi|386316120|ref|YP_006012284.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
gi|408400892|ref|YP_006858855.1| putative YbaK/prolyl-tRNAsynthetasesassociated domain-containing
protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|410493910|ref|YP_006903756.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753712|ref|ZP_12401811.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|417927390|ref|ZP_12570778.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|323126407|gb|ADX23704.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
gi|333768860|gb|EGL46020.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|340765264|gb|EGR87790.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|407967120|dbj|BAM60358.1| putative YbaK/prolyl-tRNAsynthetasesassociated domain-containing
protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|410439070|emb|CCI61698.1| Prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 162
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++ +L DL I F EH +T E ++ I G +K +FL +KK Y + + D K
Sbjct: 7 VIDKLTDLGIAFEVVEHEPALTTEQADSFIEGIDGVRTKTMFLTNKKKTQYYLLIMDDQK 66
Query: 68 -VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+DM + G + +RMA +++ + + +P G V+PF L+N +D+ + +D+
Sbjct: 67 QLDMDRFKELAGANR--IRMASADSLYDKMLLPPGVVSPFGLLNNRDKDILVYIDQDIMP 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++R FHP +N+ +I + T DL +F++S+G D ++L
Sbjct: 125 EKRMSFHPNTNEKTIFVETPDLVRFIESLGYDVHVINL 162
>gi|346307639|ref|ZP_08849771.1| hypothetical protein HMPREF9457_01480 [Dorea formicigenerans
4_6_53AFAA]
gi|345904988|gb|EGX74729.1| hypothetical protein HMPREF9457_01480 [Dorea formicigenerans
4_6_53AFAA]
Length = 163
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M+ K ++ L L I++ EH V T+E + G L KNLFL+D K R ++
Sbjct: 1 MSEQKQRVYDALNKLGIKYEVVEHEPVHTMEDMDRLGLPEKGTLCKNLFLRDAKGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
++ + KVD+K L ++LG G L A EE + + L + GSV+PF L+N++ V
Sbjct: 61 ITCDENAKVDLKSLGRQLG--AGNLSFASEERLEKYLGLKQGSVSPFGLMNDTDHAVEFF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+DK + HPL N ++ L+ DLDKFL ++ D + L
Sbjct: 119 IDKNLSKCKSLGIHPLENTATVFLSFKDLDKFLWNLDVDVMKIRL 163
>gi|261333461|emb|CBH16456.1| bifunctional aminoacyl-tRNA synthetase, putative [Trypanosoma
brucei gambiense DAL972]
Length = 808
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN-----IGGGLSKNLFLKDKKHRFYIVS 61
+LL L+ L + H TVE K +G IG +KNLFLK K +VS
Sbjct: 104 ELLQVLQSLGLSLPTISHEEKHTVEEANKELGRFEVPCIG---TKNLFLKSSKGELVLVS 160
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AL TK +MK + + LR A E+ +LE L V GSVTPFALVN A+DV + LD
Sbjct: 161 ALHTTKTNMKTVQN--AMKTKDLRFASEDLLLEKLGVVQGSVTPFALVNNGAKDVKVALD 218
Query: 122 KGF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K + FHP ND S + L FL+ I VD
Sbjct: 219 KALIDSTLPVVFHPCRNDKSTLITPTQLQDFLQKIDFPYTVVDF 262
>gi|358464283|ref|ZP_09174248.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 058 str. F0407]
gi|357067049|gb|EHI77179.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
sp. oral taxon 058 str. F0407]
Length = 163
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALAD 65
Q+ L++L I F EHP V T E + + G +K++FL + KK ++Y++ + D
Sbjct: 6 QVANTLQELGITFDVVEHPPVFTTEQADSCIEGMEGVRTKSMFLTNRKKTQYYLL--IMD 63
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K + + ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 64 DKKRLDMYDFKVQVGADRIRMASLDSLAEKMTLPAGTVSPFGLLNNEEKDILVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+++ FHP +N+ +I + + DL +FL+SIG ++ L
Sbjct: 124 SEDIMTFHPNTNEKTIFIKSKDLFRFLESIGFTYKFLTLH 163
>gi|270293175|ref|ZP_06199386.1| conserved hypothetical protein [Streptococcus sp. M143]
gi|270279154|gb|EFA25000.1| conserved hypothetical protein [Streptococcus sp. M143]
Length = 163
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ +L++L I F EHP V T E Y+ + G +K++FL ++K Y + + D
Sbjct: 6 QVANKLQELGITFDVVEHPPVFTTEQADSYIEGMEGVRTKSMFLTNRKKTQYYLLIMGDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G + MA +++ E +++ G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMADF--KVQVGANRIHMASADSLAEKMQLSPGTVSPFGLLNNEEKDILVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+++ FHP +N+ +I + DL +FL SIG ++ L
Sbjct: 124 SEDIMTFHPNTNEKTIFIKIQDLFRFLDSIGFTYEFLTL 162
>gi|456370132|gb|EMF49030.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parauberis KRS-02109]
Length = 162
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVD 69
+L +L I F H +T E ++ I G +K +FL +KK +FY++ +D
Sbjct: 10 KLNELGIAFQIVGHEPALTTEQADSFIEGIDGVRTKTMFLTNKKKTQFYLLIMDDQKMLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + +G + +RMA E++ E + +P G V+PF L+N D+++ +DK +ER
Sbjct: 70 MDAFKEVVGANR--MRMASSESLYEKMLLPPGVVSPFGLLNNKDHDISVYIDKEIIPEER 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ +I L TNDL FL +I ++L
Sbjct: 128 MSFHPNTNEKTIFLATNDLLTFLAAIDYPATIIEL 162
>gi|296186108|ref|ZP_06854513.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Clostridium
carboxidivorans P7]
gi|296049376|gb|EFG88805.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Clostridium
carboxidivorans P7]
Length = 164
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L A L L IE+++YEH AV T+E + G KNLFL+++K + + + ++
Sbjct: 8 KLYAALDGLNIEYTRYEHDAVYTIEEIKEKNLVFDGAGCKNLFLRNRKGDIHYLVVVEES 67
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K VD+K LS+ +G L EE + L + GSVTP L+N + + V L++D
Sbjct: 68 KTVDLKKLSK--DIGSTPLSFGSEERLYNNLGLMRGSVTPMGLINNTDKKVKLIIDSDLA 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ HP N +I L+ DL+KF+ G + +Y+ +
Sbjct: 126 KSQKIAVHPNVNTATIVLSLKDLEKFVHWCGNEFSYIKI 164
>gi|237842879|ref|XP_002370737.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211968401|gb|EEB03597.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|221485712|gb|EEE23993.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
gi|221502920|gb|EEE28630.1| prolyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
Length = 711
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
L +L++L I + + H V TV+A K G ++ NLFLK+K+ RF++++ D +
Sbjct: 22 LQKLEELGIGYQLHRHAPVATVDAMVKASFRDKGVIAANLFLKEKQ-RFFLLTVTHDLPI 80
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
+K +++ L + +R+A EE + +L V GSVTP A + + ++V L+ D K
Sbjct: 81 PLKGIAKLLSAPR--MRLADEELLGPMLDVSKGSVTPLAAMCDEKKEVTLVFDSAMKKNP 138
Query: 129 R--CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD------LEANPAVGKDQPPDLAA 180
HPL N +++L +DL KF+++ G ++D L A PA G ++P A
Sbjct: 139 DLVVLVHPLHNKATVALKASDLVKFVEACGHSVMWLDVDEAVKLAAAPAGGANKPNAPAG 198
Query: 181 FVPSGSTVLPD 191
P + D
Sbjct: 199 KAPGAKEAVTD 209
>gi|289064339|gb|ADC80545.1| proline aminoacyl-tRNA synthetase [Toxoplasma gondii]
Length = 783
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
L +L++L I + + H V TV+A K G ++ NLFLK+K+ RF++++ D +
Sbjct: 140 LQKLEELGIGYQLHRHAPVATVDAMVKASFRDKGVIAANLFLKEKQ-RFFLLTVTHDLPI 198
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
+K +++ L + +R+A EE + +L V GSVTP A + + ++V L+ D K
Sbjct: 199 PLKGIAKLLSAPR--MRLADEELLGPMLDVSKGSVTPLAAMCDEKKEVTLVFDSAMKKNP 256
Query: 129 R--CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD------LEANPAVGKDQPPDLAA 180
HPL N +++L +DL KF+++ G ++D L A PA G ++P A
Sbjct: 257 DLVVLVHPLHNKATVALKASDLVKFVEACGHSVMWLDVDEAVKLAAAPAGGANKPNAPAG 316
Query: 181 FVPSGSTVLPD 191
P + D
Sbjct: 317 KAPGAKEAVTD 327
>gi|307243894|ref|ZP_07526019.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492716|gb|EFM64744.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Peptostreptococcus stomatis DSM 17678]
Length = 165
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSA 62
++ Q+ +L L IE+ EH + T E K G KNLFL++ K +++Y+++A
Sbjct: 6 NEQQVYDKLDSLGIEYKLIEHEPLFTAEDMDKIADRAPGIQCKNLFLRNAKGNKYYLITA 65
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ ++DM + +++G + L E ++++LK+ GSV PF+L+N++ ++V LD+
Sbjct: 66 EHNAEIDMTDIREKIGSTR--LSFGSPERLMKVLKLEPGSVNPFSLINDTNKEVQFFLDR 123
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ FHP N +++++ L K+L SIG +DL
Sbjct: 124 SLITDQQLNFHPNVNYKTVNISLEGLKKYLASIGVIVNLIDL 165
>gi|71748872|ref|XP_827775.1| prolyl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833159|gb|EAN78663.1| prolyl-trna synthetase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 808
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN-----IGGGLSKNLFLKDKKHRFYIVS 61
+LL L+ L + H TVE K +G IG +KNLFLK K +VS
Sbjct: 104 ELLQVLQSLGLSLPTISHEEKHTVEEANKELGRFEVPCIG---TKNLFLKSSKGELVLVS 160
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AL TK +MK + + LR A E+ +LE L V GSVTPFALVN A+DV + LD
Sbjct: 161 ALHTTKTNMKTVQN--AMKTKDLRFASEDLLLEKLGVVQGSVTPFALVNNGAKDVKVALD 218
Query: 122 KGF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
K + FHP ND S + L FL+ I
Sbjct: 219 KALVDSTLPVVFHPCRNDKSTLITPTQLQDFLQKI 253
>gi|315497149|ref|YP_004085953.1| YbaK/prolyl-tRNA synthetase associated protein [Asticcacaulis
excentricus CB 48]
gi|315415161|gb|ADU11802.1| YbaK/prolyl-tRNA synthetase associated region [Asticcacaulis
excentricus CB 48]
Length = 169
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
Y++ LL L + EH AV V ++ G +KNLFLKD K + +++SA
Sbjct: 7 YTQSTLLQALNGWGLLPRTTEHEAVFRVGEGEGIKDSLPGAHTKNLFLKDDKGQLWLISA 66
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
T++++K L + +G G+ L EE + + L V GSVT AL+N+ +V +LD+
Sbjct: 67 EQQTQINLKALPKVIGSGR--LSFGSEERLYQALGVRPGSVTALALINDPEHNVKFILDQ 124
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
E FHPL N + +L+ D FL + RD +D
Sbjct: 125 RLYEAEIVNFHPLINTATTALDQGDFRLFLDKLRRDYRVIDF 166
>gi|310659540|ref|YP_003937261.1| putative DNA-binding protein (PrdX) [[Clostridium] sticklandii]
gi|308826318|emb|CBH22356.1| putative DNA-binding protein (PrdX) [[Clostridium] sticklandii]
Length = 162
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKY-VGNIGGGLSKNLFLKDKKHR-FYIVS 61
+K ++A+L +L+I ++ EH V T+E K + N+ + KNLFL+D K R Y+V
Sbjct: 3 AKQAVIAKLDELKINYTLIEHDPVYTIEEMEKIDIENVDY-IVKNLFLRDAKGRQHYLVV 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A D K+D+K L ++G K L A E+ + + LK+ G+V+PF ++N+ +V ++ D
Sbjct: 62 ADKDQKIDLKTLQDKIGSTK--LSFASEDRLQKYLKLTKGAVSPFGVLNDETAEVEVVFD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
K + HP N ++ L+ DL+K +K+ G
Sbjct: 120 KNLVGRSCVAVHPNDNSATVVLSYEDLEKIVKANG 154
>gi|384447004|ref|YP_005661222.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Brucella melitensis NI]
gi|349745001|gb|AEQ10543.1| YbaK/prolyl-tRNA synthetase associated protein [Brucella melitensis
NI]
Length = 144
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 38 GNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILK 97
G I GG +KNLFLKDKK F++V+ D VD+K + Q +G + E ++E L
Sbjct: 9 GEIPGGHTKNLFLKDKKDNFFLVTVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLG 67
Query: 98 VPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
V GSVT F N++ V ++LD G + HPL+N+ + S+ DL FLKS G
Sbjct: 68 VIPGSVTVFGAANDTNHRVQVILDAGLMKYDIINGHPLTNEATTSIRREDLIAFLKSTGH 127
Query: 158 DP 159
+P
Sbjct: 128 EP 129
>gi|418070092|ref|ZP_12707369.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Pediococcus acidilactici MA18/5M]
gi|357536623|gb|EHJ20654.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Pediococcus acidilactici MA18/5M]
Length = 162
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-V 68
A+L +L I F HP T Y+ I G +K++FL +++ Y + + D K +
Sbjct: 9 AKLTELNIPFEIVNHPPATTTAEADSYIKGISGVRTKSMFLTNRRKSAYYLLIMDDQKHL 68
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
DM + +G + L +A ++++ +K+ G V+PF L+N + RDV + DK ++
Sbjct: 69 DMHKFEEIVG--EKRLHLASSASLIKKMKLAPGIVSPFGLLNNAERDVQVYFDKDIVDEQ 126
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
R FHP +N+ +I L T DL KF++++G V+L
Sbjct: 127 RMSFHPNTNEQTIFLATTDLFKFIEAVGFGYRVVEL 162
>gi|75486045|sp|Q9L4Q7.1|PROX_CLOSD RecName: Full=Prolyl-tRNA editing protein ProX; AltName:
Full=Prolyl-tRNA deacylase ProX
gi|6899999|emb|CAB71308.1| putative DNA-binding protein [[Clostridium] sticklandii]
Length = 164
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKY-VGNIGGGLSKNLFLKDKKHR-FYIVS 61
+K ++A+L +L+I ++ EH V T+E K + N+ + KNLFL+D K R Y+V
Sbjct: 5 AKQAVIAKLDELKINYTLIEHDPVYTIEEMEKIDIENVDY-IVKNLFLRDAKGRQHYLVV 63
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A D K+D+K L ++G K L A E+ + + LK+ G+V+PF ++N+ +V ++ D
Sbjct: 64 ADKDQKIDLKTLQDKIGSTK--LSFASEDRLQKYLKLTKGAVSPFGVLNDETAEVEVVFD 121
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
K + HP N ++ L+ DL+K +K+ G
Sbjct: 122 KNLVGRSCVAVHPNDNSATVVLSYEDLEKIVKANG 156
>gi|406658008|ref|ZP_11066148.1| hypothetical protein A0G_0172 [Streptococcus iniae 9117]
gi|405578223|gb|EKB52337.1| hypothetical protein A0G_0172 [Streptococcus iniae 9117]
Length = 162
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV-DM 70
L +L I+F H +T E ++ I G +K +FL +KK Y + + D K+ DM
Sbjct: 11 LNELGIDFQVVAHEPALTTEQADAFIEGIEGVRTKTMFLTNKKKTQYYLLIMDDQKLLDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +G + +RMA E++ + +P G V+PF L+N D+ + DK +ER
Sbjct: 71 ERFKDLVGANR--IRMASAESLYAKMLLPPGIVSPFGLLNNEDHDILVYFDKAIMDEERM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +ND +I L T DL FL++I +DL
Sbjct: 129 SFHPNTNDKTIFLKTTDLLAFLEAIDYQVTIIDL 162
>gi|407407380|gb|EKF31205.1| prolyl-tRNA synthetase, putative,bifunctional aminoacyl-tRNA
synthetase, putative [Trypanosoma cruzi marinkellei]
Length = 890
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS--KNLFLKDKKHRFYIVSA 62
+ ++L L+ L ++ H TVE K +G G + KN FLK KK +V+A
Sbjct: 172 ESEMLKILRALGLDLPTISHEEKHTVEEANKELGRFGVPCTGTKNFFLKSKKEDLVLVTA 231
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L T+ +MKV+ L L LR APE+ + L V GSVTP ALVN ++++ L+LDK
Sbjct: 232 LHTTRTNMKVIQDALSLKD--LRFAPEDVLRTHLGVVQGSVTPLALVNNESKNIKLVLDK 289
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
++ HP ND S + L FL+ + VD A+ G
Sbjct: 290 ALVESPIPVVLHPCRNDKSCLVTPKQLQDFLRKLEYPFVVVDFSADATGG 339
>gi|401412462|ref|XP_003885678.1| putative prolyl-tRNA synthetase [Neospora caninum Liverpool]
gi|325120098|emb|CBZ55652.1| putative prolyl-tRNA synthetase [Neospora caninum Liverpool]
Length = 656
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
L +L++L I++ + H V TV+A K G ++ NLFLK+K+ RF++++ D +
Sbjct: 22 LQKLQELGIDYQVHRHAPVATVDAMVKASFREKGLIAANLFLKEKQ-RFFLLTVTHDLPI 80
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
+K +++ L + +R+A EE + +L V GSVTP A + ++ +V L+ DK K
Sbjct: 81 PLKGIAKLLSAPR--MRLADEELLGPMLDVSRGSVTPLAAMCDAKNEVTLVFDKDMKENP 138
Query: 129 R--CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
HPL N +++L DL KF+++ G ++D++
Sbjct: 139 DLVVLVHPLHNKATVALKAADLLKFVEACGHSVTWIDID 177
>gi|407846714|gb|EKG02718.1| prolyl-tRNA synthetase, putative,bifunctional aminoacyl-tRNA
synthetase, putative [Trypanosoma cruzi]
Length = 810
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS--KNLFLKDKKHRFYIVSA 62
+ ++L L+ L ++ H TVE K +G G + KN+FLK KK +V+A
Sbjct: 92 ESEMLKILRALGMDLPTISHEEKHTVEEANKELGRFGVPCTGTKNMFLKSKKEDLVLVTA 151
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L T+ +MKV+ L L LR APE+ + L V G VTP ALVN ++++ L+LDK
Sbjct: 152 LHTTRTNMKVIQDALSLKD--LRFAPEDVLRTHLGVVQGGVTPLALVNNESKNIKLVLDK 209
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
++ HP ND S + L FL+ + VD A G
Sbjct: 210 ALVESTVPVVLHPCRNDKSCLMTPKQLQDFLRKLEYPFVVVDFSAEATGG 259
>gi|390948127|ref|YP_006411887.1| hypothetical protein Alfi_2955 [Alistipes finegoldii DSM 17242]
gi|390424696|gb|AFL79202.1| hypothetical protein Alfi_2955 [Alistipes finegoldii DSM 17242]
Length = 257
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSAL 63
+ ++ L I ++ YEHP T+E +Y + G KNLF ++ K +R Y+V+
Sbjct: 98 RQKVFDWLDSHGIAYTWYEHPEAPTIEIARRYWRDDGSKHCKNLFFRNHKGNRHYLVAFD 157
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ + + L +RL GK L A E+ M L + GSV+PF L+N+ R V L LD+
Sbjct: 158 CEQNLAIHDLERRLRQGK--LSFASEQRMERWLGLRPGSVSPFGLINDPERHVHLFLDRN 215
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ FHP N ++ ++ ++ ++L ++G +++L
Sbjct: 216 LERFPAYSFHPNDNRATVVVSRSEFLRYLAAVGNTYEFIEL 256
>gi|71653235|ref|XP_815258.1| prolyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70880301|gb|EAN93407.1| prolyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 810
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS--KNLFLKDKKHRFYIVSA 62
+ ++L L+ L ++ H TVE K +G G + KN+FLK KK +V+A
Sbjct: 92 ESEMLKILRALGMDLPTISHEEKHTVEEANKELGRFGVPCTGTKNIFLKSKKEDLVLVTA 151
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L T+ +MKV+ L L LR APE+ + L V G VTP ALVN ++++ L+LDK
Sbjct: 152 LHTTRTNMKVIQDALSLKD--LRFAPEDVLRTHLGVVQGGVTPLALVNNESKNIKLVLDK 209
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
++ HP ND S + L FL+ + VD A G
Sbjct: 210 ALVESTVPVVLHPCRNDKSCLITPKQLQDFLRKLEYPFVVVDFSAEATGG 259
>gi|71665969|ref|XP_819949.1| prolyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70885272|gb|EAN98098.1| prolyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 810
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS--KNLFLKDKKHRFYIVSA 62
+ ++L L+ L ++ H TVE K +G G + KN+FLK KK +V+A
Sbjct: 92 ESEMLKILRALGMDLPTISHEEKHTVEEANKELGRFGVPCTGTKNIFLKSKKEDLVLVTA 151
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
L T+ +MKV+ L L LR APE+ + L V G VTP ALVN ++++ L+LDK
Sbjct: 152 LHTTRTNMKVIQDALSLKD--LRFAPEDVLRTHLGVVQGGVTPLALVNNESKNIKLVLDK 209
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVG 171
++ HP ND S + L FL+ + VD A G
Sbjct: 210 ALVESTVPVVLHPCRNDKSCLITPKQLQDFLRKLEYPFVVVDFSAEATGG 259
>gi|457094389|gb|EMG24918.1| aminoacyl-tRNA editing enzyme [Streptococcus parauberis KRS-02083]
Length = 162
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVD 69
+L +L I F H +T E ++ I G +K +FL +KK +FY++ +D
Sbjct: 10 KLNELGIAFQIVGHEPALTTEQADSFIEGIDGVRTKTMFLTNKKKTQFYLLIMDDQKMLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + +G + RMA +++ E + +P G V+PF L+N D+++ +DK ++ER
Sbjct: 70 MDAFKEVVGANRT--RMASSDSLYEKMLLPPGVVSPFGLLNNKDHDISVYIDKEIISEER 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ +I L TNDL FL +I ++L
Sbjct: 128 MSFHPNTNEKTIFLATNDLLTFLAAIDYPATIIEL 162
>gi|329117638|ref|ZP_08246355.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parauberis NCFD 2020]
gi|326908043|gb|EGE54957.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parauberis NCFD 2020]
Length = 162
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVD 69
+L +L I F H +T E ++ I G +K +FL +KK +FY++ +D
Sbjct: 10 KLNELGIAFQIVGHEPALTTEQADSFIEGIDGVRTKTMFLTNKKKTQFYLLIMDDQKMLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + +G + +RMA +++ E + +P G V+PF L+N D+++ +DK +ER
Sbjct: 70 MDAFKEVVGANR--MRMASSDSLYEKMLLPPGVVSPFGLLNNKDHDISVYIDKEIIPEER 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP +N+ +I L TNDL FL +I ++L
Sbjct: 128 MSFHPNTNEKTIFLATNDLLTFLAAIDYPATIIEL 162
>gi|167760582|ref|ZP_02432709.1| hypothetical protein CLOSCI_02956 [Clostridium scindens ATCC 35704]
gi|336423490|ref|ZP_08603618.1| hypothetical protein HMPREF0993_02995 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167661803|gb|EDS05933.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
scindens ATCC 35704]
gi|336004294|gb|EGN34360.1| hypothetical protein HMPREF0993_02995 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 163
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K ++ L L+I++ EH V T+E + G L KNLFL+D K R ++
Sbjct: 1 MENQKQRVYDALDKLKIKYEVVEHEPVHTMEDMDRLGLPEKGTLCKNLFLRDSKGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V+ KVD+K L ++LG G L A E+ + + L + GSV+PF L+N++ V
Sbjct: 61 VTCEESKKVDLKSLGRQLG--GGNLSFASEDRLEKYLGLKQGSVSPFGLMNDTDHAVEFF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+DK + HPL N ++ L+ DLDKFL + D + L
Sbjct: 119 IDKDLSRCKSLGIHPLENTATVFLSFKDLDKFLWDLDVDVVKIKL 163
>gi|363898525|ref|ZP_09325048.1| hypothetical protein HMPREF9625_00065 [Oribacterium sp. ACB1]
gi|395208050|ref|ZP_10397387.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. ACB8]
gi|361960992|gb|EHL14222.1| hypothetical protein HMPREF9625_00065 [Oribacterium sp. ACB1]
gi|394706258|gb|EJF13777.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. ACB8]
Length = 162
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
+++ L++ IE EH A T+E + + I G +K LFL +KK RFY++ +
Sbjct: 6 EVMETLQEQNIEVQLVEHEAAFTMEDADRAIEGIPGVRTKTLFLMNKKKTRFYLLIMDEN 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++DM + + L+MA EE + E L + G V+PF L+N+ DV + +DK
Sbjct: 66 KRLDMSAFKELVD--DRQLKMASEEMLYEKLGLQPGGVSPFGLLNDKDGDVEVYIDKDIA 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ER FHP +N+ ++ + T DL FL+ IG
Sbjct: 124 DEERMSFHPNTNEKTVFIKTVDLYPFLEHIGH 155
>gi|359409237|ref|ZP_09201705.1| hypothetical protein HIMB100_00019240 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675990|gb|EHI48343.1| hypothetical protein HIMB100_00019240 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 181
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYV------GNIGGGLSKNLFLKDKKHRF 57
+ DQLL L + +H + TV A +K V GGG KNL+L+DKK +
Sbjct: 14 TSDQLLDMLTVGGFSVQRIDHIPLRTV-ADSKQVRDGFLSAEDGGGHIKNLYLRDKKKQN 72
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
++V D VD+K LS ++G + L + +LE L V G+VTP A+V DV
Sbjct: 73 FLVVLPEDADVDLKTLSNKMGAAR--LSFGSADRLLEHLGVRPGAVTPLAMVTGVHYDVT 130
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
L +D + + HPL ND ++ ++ D+++FL G ++DL+ N
Sbjct: 131 LFIDSRLRDVNVLYMHPLVNDRTVGMSPADVEQFLAQKGVRINWLDLDTN 180
>gi|335046859|ref|ZP_08539882.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333760645|gb|EGL38202.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 162
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
+++ +L++ IE EH A T+E + + I G +K LFL +KK +FY++ D
Sbjct: 6 EVMEKLQEQNIEVQLVEHEAAFTMEDADRVIEGIPGVRTKTLFLMNKKKIKFYLLIMDED 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++DM + L+MA EE + E L + G V+PF L+N +DV + +DK
Sbjct: 66 KRLDMSAFKDLVD--DRQLKMASEEMLYEKLGLQPGVVSPFGLLNNKDKDVEVFVDKDIA 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ER FHP +N+ +I + + DL FL+ I PA + L
Sbjct: 124 EEERMSFHPNTNEKTIFIKSPDLYSFLEKIDH-PAKIVL 161
>gi|442610689|ref|ZP_21025399.1| FIG042921: similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747718|emb|CCQ11461.1| FIG042921: similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 174
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFY-IVSALADT 66
L ARL L I + QYEHP + T G KNLFL+D R + ++ +
Sbjct: 10 LKARLAQLSITYEQYEHPPLTTCFDADHLKLVRSGARLKNLFLRDNYGRVHALLLTTPER 69
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K LS++LGL + G A E + + L V G V+ AL+N+S++ V L +D+
Sbjct: 70 RVDLKALSKQLGLSRLG--FASNERLEKYLGVKPGCVSALALINDSSQHVRLWIDEALWQ 127
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
Q HP N + L +DL +F +++G P
Sbjct: 128 QTHWQCHPFDNRYTWVLAKHDLIQFWQTLGITP 160
>gi|227529241|ref|ZP_03959290.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
vaginalis ATCC 49540]
gi|227350822|gb|EEJ41113.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
vaginalis ATCC 49540]
Length = 169
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ +Q++ L L I++ +HPA T E KY+ G +K +FLK KK FY+V
Sbjct: 10 TYEQVINELDRLGIKYGMVDHPAAETTEQADKYIEGHEGVRTKTMFLKGKKKHFYLVIMD 69
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+D K + G + + MA + + E L G V+PF L+N ++ + D+
Sbjct: 70 DQKPMDFKEFQELTGAKR--VSMARPDDLQEQLGSHAGVVSPFGLMNSEEHNIKVYFDQD 127
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
A++ FHP N +I + T DL KF+K G DP +DL
Sbjct: 128 MLAEDPILTFHPNVNTHTIFIKTTDLMKFIKEQGYDPEIIDL 169
>gi|392544445|ref|ZP_10291582.1| hypothetical protein PpisJ2_21854 [Pseudoalteromonas piscicida JCM
20779]
Length = 170
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD---KKHRFYIVSALA 64
L RL L I + YEHP + T A G KNLFL+D K+H +I+ A
Sbjct: 9 LAERLAQLDINYLNYEHPPLHTCLAADNLKLERKGTRLKNLFLRDNYGKRHFLFIIPA-- 66
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D +VD+K LS+ G+ + G A + + + L V G V+ L N+S + V L LD
Sbjct: 67 DKQVDLKALSKSQGMSRLGF--ASTDRLAKYLGVEQGCVSALTLHNDSEQQVELWLDSEL 124
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
++ + HPL N + L DL +F + G P +VD
Sbjct: 125 QSAQLWQCHPLVNTKTWVLTLEDLKRFWQVTGHSPHWVD 163
>gi|363897793|ref|ZP_09324331.1| hypothetical protein HMPREF9624_00893 [Oribacterium sp. ACB7]
gi|361958258|gb|EHL11560.1| hypothetical protein HMPREF9624_00893 [Oribacterium sp. ACB7]
Length = 162
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
+++ L++ IE EH A T+E + + I G +K LFL +KK +FY++ D
Sbjct: 6 EVMETLQEQNIEVQLVEHEAAFTMEDADRAIEGIPGVRTKTLFLMNKKKTKFYLLIMDED 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++DM + L+MA EE + E L + G V+PF L+N DV + +DK
Sbjct: 66 KRLDMSAFKDLVD--DRQLKMASEEMLYEKLGLQPGGVSPFGLLNNKDGDVEVYIDKDIA 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ER FHP +N+ ++ + T DL FL+ IG
Sbjct: 124 EEERMSFHPNTNEKTVFIKTVDLYPFLEHIGH 155
>gi|86137226|ref|ZP_01055804.1| YbaK/prolyl-tRNA synthetase domain protein [Roseobacter sp. MED193]
gi|85826550|gb|EAQ46747.1| YbaK/prolyl-tRNA synthetase domain protein [Roseobacter sp. MED193]
Length = 176
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGG-GLS----KNLFLKDKKHRFYIV 60
D LLA+L + + ++ + H + TVE + + GLS KNL+L+D+K R Y++
Sbjct: 17 DALLAQLTEWGLPYTLFTHVPLRTVEEAKQVEAEMQQPGLSSLKIKNLYLRDRKKRNYLI 76
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
S D ++D+K LS+ +G GGL + +++ L + G+V+P A++ + V +
Sbjct: 77 SVEQDREIDLKALSKEIG--AGGLSFGSSDRLMQNLGILPGAVSPLAMITGVGQGVRFYM 134
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
D + + + HPL ND ++ + D FL+ IG + +V
Sbjct: 135 DAAARDVDVIYMHPLVNDRTVMMARGDFLAFLERIGCEINWV 176
>gi|306829088|ref|ZP_07462278.1| conserved hypothetical protein [Streptococcus mitis ATCC 6249]
gi|304428174|gb|EFM31264.1| conserved hypothetical protein [Streptococcus mitis ATCC 6249]
Length = 163
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+ L++L I F E P V T E Y+ G +K++FL ++K Y + + D
Sbjct: 6 QVANTLQELGITFDVVELPLVFTTEQADSYIEGREGVRTKSMFLTNRKKTQYYLLIMDDK 65
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K +DM ++ +G +RMA +++ E + +P G+V+PF L+N +D+ + DK
Sbjct: 66 KRLDMD--DFKVQVGANRIRMASLDSLAEKMNLPAGTVSPFGLLNNDEKDILVYFDKDIV 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP +N+ +I + + DL +FL+SIG
Sbjct: 124 SEDIMTFHPNTNEKTIFIKSKDLFRFLESIG 154
>gi|225570222|ref|ZP_03779247.1| hypothetical protein CLOHYLEM_06318 [Clostridium hylemonae DSM
15053]
gi|225161017|gb|EEG73636.1| hypothetical protein CLOHYLEM_06318 [Clostridium hylemonae DSM
15053]
Length = 163
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K ++ L L I++ EH V T+E + G L KNLFL+D K R ++
Sbjct: 1 MENQKQRVYDALNKLNIKYEVVEHEPVHTMEDMDRLGLPAKGTLCKNLFLRDAKGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V+ VD+K L + LG G L A EE + + L + GSV+PF L+N++ V
Sbjct: 61 VTCDEKKTVDLKSLGR--ALGAGNLSFASEERLEQYLGLKQGSVSPFGLMNDTDHAVEFF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+DK + HPL N ++ L+ DLDKFL + D + L
Sbjct: 119 IDKDLGRCKSLGIHPLENTATVFLSFKDLDKFLWDLDVDVMKIKL 163
>gi|400755870|ref|YP_006564238.1| hypothetical protein PGA2_c30230 [Phaeobacter gallaeciensis 2.10]
gi|398655023|gb|AFO88993.1| hypothetical protein PGA2_c30230 [Phaeobacter gallaeciensis 2.10]
Length = 175
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYV--GNIGGGLS----KNLFLKDKKHRF 57
S D LLA+L I + + H + TV A AK V G + G K L+L+DKK R
Sbjct: 14 SSDTLLAQLDAWGISYRLHGHAPLRTV-ADAKTVEEGFMQAGERALRLKTLYLRDKKKRN 72
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
++VS D VD+K L+ LGLG L E +LE L V G+VTP A+VN +DV
Sbjct: 73 HLVSLEQDRDVDLKALAAELGLGN--LSFGSAERLLETLGVRPGAVTPLAMVNGVNQDVH 130
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+DK + + + HPL ND +++L FL + R A +
Sbjct: 131 FYMDKAAQQADVIYMHPLVNDRTVALTRQ---AFLDVMSRLSAAI 172
>gi|409351500|ref|ZP_11234178.1| Putative uncharacterized protein [Lactobacillus equicursoris CIP
110162]
gi|407876720|emb|CCK86236.1| Putative uncharacterized protein [Lactobacillus equicursoris CIP
110162]
Length = 175
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIV 60
A +K + L D QI + EH V ++E +KNLF+ D+K R FY++
Sbjct: 9 AMNKQETYQWLTDHQIPYEVTEHKPVFSMEDLRDVDLPYPEANAKNLFVHDRKKRHFYLI 68
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ +VD+K +QR L L E +++IL + GSVTP L+N+ R V +
Sbjct: 69 LVRGEKRVDLKAFAQRQELK--SLSFCSEGDLMDILGLTPGSVTPLGLLNDDERQVHFFI 126
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
D F A + HP+ N ++ LN +DL + ++ G + YVD+ P
Sbjct: 127 DAEF-AGNKVAAHPMENTATVWLNADDLVQLVRDHGNEAEYVDIPVLP 173
>gi|164688008|ref|ZP_02212036.1| hypothetical protein CLOBAR_01653 [Clostridium bartlettii DSM
16795]
gi|164602421|gb|EDQ95886.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
bartlettii DSM 16795]
Length = 165
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVE-AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
+++++ + L L I++ + +H V T E A++ G I G KNLFL+D K +Y+
Sbjct: 9 TEEKVYSTLDKLNIKYDRVDHKPVFTAEEAKSCVTGLIKGVRCKNLFLQDTKKNYYLYFI 68
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
K D+K+L ++ + L A EE + E+LK+ GSVTP +VN+ + V +LLDK
Sbjct: 69 TDTKKADLKLLRDQINSTR--LSFASEEKLYEMLKLTKGSVTPLGVVNDESNKVIVLLDK 126
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
K HP N ++S+ +DL +F++ G
Sbjct: 127 DNK-DTNVLLHPQFNTTTLSIKYSDLIRFIEYCG 159
>gi|336394197|ref|ZP_08575596.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
farciminis KCTC 3681]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L+ +L L I++ +HPA T E Y+ + G +K +FLKDKK FY+V +
Sbjct: 12 LMEKLDQLDIKYKIVDHPAAETTEQADNYIAGLEGVRTKTMFLKDKKKHFYLVIMDDKKR 71
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKA 126
+D K + G + + MA + + E L + G V+PF ++N + ++ L DK +
Sbjct: 72 MDFKDFQELTGTKR--ISMAHDHDIEEQLGLEAGIVSPFGIMNNADHNIKLYFDKEMLDS 129
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+E FHP N +I L +DL KF+ + G + ++LE
Sbjct: 130 EEILTFHPNVNTHTIFLTASDLMKFIDACGFEYEILNLE 168
>gi|227530286|ref|ZP_03960335.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
vaginalis ATCC 49540]
gi|227349763|gb|EEJ40054.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
vaginalis ATCC 49540]
Length = 175
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL-AD 65
Q+ L D +IE+ HPAV T + +YV N +KNLFL + Y + L D
Sbjct: 18 QIYQLLNDNKIEYQVVHHPAVFTTDEADQYVQNYSFARTKNLFLHTHNRKNYFLYILPED 77
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-F 124
+ D K S R +G L A + M +IL V G V+PF L N+ V+L++ +
Sbjct: 78 KRFDEK--SFRQAVGSSRLSFASSDEMSQILNVTPGMVSPFNLFNDRQHQVSLIITQEVL 135
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K E HP +N ++ L T DL LK IG VDL
Sbjct: 136 KMNELIGVHPNTNTQTVILKTTDLLALLKKIGTTIQIVDL 175
>gi|358467055|ref|ZP_09176827.1| hypothetical protein HMPREF9093_01303 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068520|gb|EHI78526.1| hypothetical protein HMPREF9093_01303 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 167
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
S +++ +L+DL I F EH +T+E K++ I G +K +FL +KK + FY+V
Sbjct: 8 SYEEVEKKLRDLNINFEIVEHEPALTIEQADKFIEGIEGIRTKTMFLTNKKKKNFYLVIM 67
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
++D+ + + ++MA E+T+ E + + G V+PF L+N +DV + +D
Sbjct: 68 DEAKRLDIDYFKN--IVEEKQIKMASEDTLYEKMMLLPGVVSPFGLMNNLDKDVKVYIDI 125
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+++R FHP +N+ +I ++ DL FL IG + L
Sbjct: 126 EIMSEKRMTFHPNTNEKTIFISKEDLIIFLNDIGYQVNIIQL 167
>gi|145507630|ref|XP_001439770.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406965|emb|CAK72373.1| unnamed protein product [Paramecium tetraurelia]
Length = 698
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+K L +L L IE+ + H V T+E K G KNL DKK +Y++ A
Sbjct: 9 NKQACLEQLTKLGIEYIAHHHDPVPTMEDVVKIKVADGTAYVKNLLYVDKKSNYYLILAN 68
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA-LLLDK 122
T+V K+ + LGL G +R++ EE + E LK G+V PFA+ N++ V +++D+
Sbjct: 69 HSTQVG-KLFWKTLGLASGNMRLSKEEQIAEALKSSKGNVNPFAVANDANNLVKNIIIDE 127
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
+R HP+ N ++ ++ +DL +KFLK + R + L
Sbjct: 128 ELTKYQRLALHPIENTTTVEISLDDLQNKFLKILNRQFTVLQL 170
>gi|41055319|ref|NP_956936.1| prolyl-tRNA synthetase associated domain-containing protein 1
[Danio rerio]
gi|82187229|sp|Q6PFS2.1|PRXD1_DANRE RecName: Full=Prolyl-tRNA synthetase associated domain-containing
protein 1; AltName: Full=PrdX deacylase
domain-containing protein 1
gi|34783837|gb|AAH57440.1| Zgc:64201 [Danio rerio]
Length = 184
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
LK L IE + EHP V TVE +V ++ G ++KNLFLKDKK R ++V D + +
Sbjct: 31 LKRLNIETTCIEHPEVFTVEEMMPHVSHLSGVVTKNLFLKDKKRRVFLVCVRHDRPLALG 90
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKAQ 127
LS+R LG LR+A E +LE L+V G VTP AL ++ R V +LD+ G
Sbjct: 91 ELSRR--LGAPNLRLAEERLLLEKLRVRQGCVTPLALFLDTERSVTAVLDRELTHGGHTH 148
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
C HP++N ++ + DL +FL+ P + +
Sbjct: 149 IHC--HPMTNSATMGITPADLLRFLEETQHTPVILSFD 184
>gi|334366292|ref|ZP_08515228.1| YbaK/proline--tRNA ligase associated domain protein [Alistipes sp.
HGB5]
gi|313157480|gb|EFR56899.1| YbaK/proline--tRNA ligase associated domain protein [Alistipes sp.
HGB5]
Length = 166
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKVLSQ 75
I ++ YEHP T+E +Y + G KNLF ++ K +R Y+V+ + + + L +
Sbjct: 19 IAYTWYEHPEAPTIEIARRYWRDDGSKHCKNLFFRNHKGNRHYLVAFDCEQNLAIHDLER 78
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
RL GK L A E+ M L + GSV+PF L+N+ R V L LD+ + FHP
Sbjct: 79 RLRQGK--LSFASEQRMERWLGLRPGSVSPFGLINDPERHVHLFLDRNLERFPAYSFHPN 136
Query: 136 SNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
N ++ ++ ++ ++L ++G +++L
Sbjct: 137 DNRATVVVSRSEFLRYLAAVGNTYEFIEL 165
>gi|291460441|ref|ZP_06599831.1| putative DNA-binding protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417008|gb|EFE90727.1| putative DNA-binding protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 166
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYI 59
M +K++ LA L I + + EHP V T+E G + KNLF++D+K + ++
Sbjct: 2 MENAKERTLAALDAAGIRYDKLEHPVVCTMEEMDAAGITARGNVCKNLFVRDQKGKNHFL 61
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
+ AL + KVD+ ++ ++G + L A E + + L V GSV+P ++N+ +V ++
Sbjct: 62 IVALEEKKVDLTDVADQIGSSR--LSFASPERLEKYLGVSQGSVSPLGILNDEEHEVIVV 119
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D+ + ++ HP N +I L+ DL +F+++ G + +V L
Sbjct: 120 FDQDLRTRKEIGIHPNENTATIWLSFRDLRRFIENQGNEVDFVKL 164
>gi|354603631|ref|ZP_09021628.1| hypothetical protein HMPREF9450_00543 [Alistipes indistinctus YIT
12060]
gi|353348726|gb|EHB92994.1| hypothetical protein HMPREF9450_00543 [Alistipes indistinctus YIT
12060]
Length = 163
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSAL 63
+ ++L L I + YEHP T+E +Y + G KNLF ++ K +R Y+V
Sbjct: 4 RQKVLDYLDRTGIPYEYYEHPEAPTIEIARQYWHDDGSKHCKNLFFRNHKGNRHYLVVFD 63
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D ++ + L RL GK L A E+ M L + GSV+PF L+N+ V L LD+
Sbjct: 64 CDRQLAIHDLEHRLRQGK--LSFASEQRMERYLGLRPGSVSPFGLINDLENHVHLFLDQT 121
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ Q FHP N ++ + +FL+S G +++L
Sbjct: 122 LRDQPALSFHPNDNTATVVIRHGAFLQFLESCGNSYEFIEL 162
>gi|260432706|ref|ZP_05786677.1| YbaK/prolyl-tRNA synthetase domain protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416534|gb|EEX09793.1| YbaK/prolyl-tRNA synthetase domain protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 176
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVE----AQAKYVGNIGGGLS-KNLFLKDKKHRFY 58
S D LLA+L D + + + H + TVE + +++ L KNL+L+DKK R Y
Sbjct: 14 SSDALLAQLDDWGLPYRLHSHVPLRTVEESKAVEDQFMVPGENALRLKNLYLRDKKKRNY 73
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V+ ++D+K L LG+G L + +++ L + G+V+P A++N DV
Sbjct: 74 LVTLEQSREIDLKALGAELGVGN--LSFGSADRLMQNLGIRPGAVSPLAMINGVGNDVRF 131
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+D + + + HPL ND ++++ +DL F + IG + ++
Sbjct: 132 FMDDAARRADVIYMHPLVNDRTVAMARDDLMAFFERIGCEVTWL 175
>gi|339634245|ref|YP_004725886.1| hypothetical protein WKK_01655 [Weissella koreensis KACC 15510]
gi|338854041|gb|AEJ23207.1| hypothetical protein WKK_01655 [Weissella koreensis KACC 15510]
Length = 173
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+ L+A+L L I++ H T++ +++ N+ G +K++ L+DKK+ FY+V
Sbjct: 16 EDLIAKLTSLNIDYKIVHHAPAETIQQADQFIANLKGVRTKSMLLRDKKNNFYLVIMDDS 75
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++D K + GK L +A E + E+L + G ++PF ++ DV + DK
Sbjct: 76 KRLDFKHFQE--VSGKKRLSLAKENEVEELLNLEPGIISPFGVMYSEGHDVDIYFDKDML 133
Query: 126 AQERCF-FHPLSNDMSISLNTNDLDKFLKSIG 156
QE FHP N +I L DL KF+KS G
Sbjct: 134 DQETLLTFHPNENTHTIFLEAEDLMKFIKSYG 165
>gi|237735686|ref|ZP_04566167.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365830088|ref|ZP_09371673.1| hypothetical protein HMPREF1021_00437 [Coprobacillus sp. 3_3_56FAA]
gi|229381431|gb|EEO31522.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365263842|gb|EHM93664.1| hypothetical protein HMPREF1021_00437 [Coprobacillus sp. 3_3_56FAA]
Length = 153
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVG-NIGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
L L I++ + H +V TVE +A ++ I G KNLFLK +F+I + + D+
Sbjct: 7 LTQLGIDYQKINHQSVSTVE-EAMFINEQIDGVACKNLFLKSSDKQFFIYMMTVEKRADL 65
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +++++G + L A +E ++E+LK+ GSVTP ++N++ R V +L+D+ +AQ R
Sbjct: 66 KYIAKQIGSKR--LSFASDEELVELLKLIPGSVTPLGIINDNKR-VKILIDRELRAQ-RL 121
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRD 158
HP N +IS+ +DL F+ + G +
Sbjct: 122 LIHPNINTATISITYDDLLLFINACGNE 149
>gi|392308439|ref|ZP_10270973.1| hypothetical protein PcitN1_07228 [Pseudoalteromonas citrea NCIMB
1889]
Length = 166
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS-ALAD 65
QL L L I F YEHP + T K G KNLFL+D + + +I+ AD
Sbjct: 7 QLKTVLDTLNISFKSYEHPPLPTCTDAQKIGLKRSGVQIKNLFLRDNRGKKHILCLTRAD 66
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
KVD+K LS + L + GL A E + + L V G V+ AL+N+ + V L LD G
Sbjct: 67 LKVDLKALSTQQKLSRLGL--ASTERLDKYLGVKPGCVSALALMNDDNKAVELWLDSGLL 124
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP ND + L +DL F + G P VD+
Sbjct: 125 NELEWQCHPFENDKTWVLQQHDLYTFWRQTGHYPRIVDI 163
>gi|167757229|ref|ZP_02429356.1| hypothetical protein CLORAM_02779 [Clostridium ramosum DSM 1402]
gi|374626324|ref|ZP_09698737.1| hypothetical protein HMPREF0978_02057 [Coprobacillus sp.
8_2_54BFAA]
gi|167703404|gb|EDS17983.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
ramosum DSM 1402]
gi|373914181|gb|EHQ46013.1| hypothetical protein HMPREF0978_02057 [Coprobacillus sp.
8_2_54BFAA]
Length = 153
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVG-NIGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
L L I++ + H +V TVE +A ++ I G KNLFLK +F+I + + D+
Sbjct: 7 LTQLGIDYQKINHQSVSTVE-EAMFINEQIDGVACKNLFLKSSDKQFFIYMMTVERRADL 65
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +++++G + L A +E ++E+LK+ GSVTP ++N++ R V +L+D+ +AQ R
Sbjct: 66 KYIAKQIGSKR--LSFASDEELVELLKLIPGSVTPLGIINDNKR-VKILIDRELRAQ-RL 121
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRD 158
HP N +IS+ +DL F+ + G +
Sbjct: 122 LIHPNINTATISITYDDLLLFINACGNE 149
>gi|363897791|ref|ZP_09324329.1| hypothetical protein HMPREF9624_00891 [Oribacterium sp. ACB7]
gi|361958256|gb|EHL11558.1| hypothetical protein HMPREF9624_00891 [Oribacterium sp. ACB7]
Length = 155
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTK 67
+ +L++ IE EH A T+E + + I G +K LFL +KK +FY++ D +
Sbjct: 1 MEKLQEQIIEVQLVEHEAAFTMEDANRAIEGIPGVRTKTLFLMNKKKTKFYLLIMDEDKR 60
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+DM + L+MA EE + E L + G V+PF L+N +DV + +DK +
Sbjct: 61 LDMSAFKDLVD--DRQLKMASEEMLYEKLGLQPGVVSPFGLLNNKDKDVEVFVDKDIAEE 118
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER FHP +N+ +I + + DL FL+ I PA + L
Sbjct: 119 ERMSFHPNTNEKTIFIKSPDLYSFLEKIDH-PAKIVL 154
>gi|417089229|ref|ZP_11955420.1| hypothetical protein SSUR61_0269 [Streptococcus suis R61]
gi|353534178|gb|EHC03810.1| hypothetical protein SSUR61_0269 [Streptococcus suis R61]
Length = 161
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 89/161 (55%), Gaps = 4/161 (2%)
Query: 6 DQLLAR-LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
D+L+ + L DL ++++ EHP T E +Y+ + G +K++FL +KK FY++
Sbjct: 2 DKLVFKTLADLGMDYTIVEHPPARTTEEADRYIEGLEGVRTKSMFLTNKKKTAFYLLIMD 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
++DM +G + +RMA E+++E + +P G+V+ F L++ +D+ + DK
Sbjct: 62 DQKQLDMDQFRDLVGANR--IRMASSESLMEKMHLPAGAVSVFGLLHNVDKDIQVFFDKE 119
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ FHP N +I + T D+ +F++ IG VDL
Sbjct: 120 ILSEPILTFHPNVNTKTIFVKTEDVLRFVEEIGFSATIVDL 160
>gi|158321389|ref|YP_001513896.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Alkaliphilus oremlandii OhILAs]
gi|158141588|gb|ABW19900.1| YbaK/prolyl-tRNA synthetase associated region [Alkaliphilus
oremlandii OhILAs]
Length = 165
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 15 LQIEFSQYEHPAVMTV-EAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
L I + +Y HPAV T+ E + + KNLFL++ K + Y+V + K K
Sbjct: 15 LNIVYDRYTHPAVYTIAEIEEHELKGDNIAHCKNLFLRNSKGDQHYLVVIESSKKTSTKD 74
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
L++++G + L A + M + L + G+V+PF L+N+ ++V LL+DK + +E+ F
Sbjct: 75 LAKQIGSTR--LSFASPDRMEQYLGLEPGAVSPFGLINDENKEVVLLIDKDLQKREKITF 132
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
HP N SI++ D ++++ YVD+E
Sbjct: 133 HPNINTASITITYEDFQRYVQWCSNTVQYVDVE 165
>gi|386586588|ref|YP_006082990.1| hypothetical protein SSUD12_1462 [Streptococcus suis D12]
gi|353738734|gb|AER19742.1| hypothetical protein SSUD12_1462 [Streptococcus suis D12]
Length = 164
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L DL ++++ EHP +T E +Y+ + G +K++FL +KK FY++ ++DM
Sbjct: 9 LADLGMDYTIVEHPPALTTEEADRYIEGLEGVRTKSMFLTNKKKTAFYLLIMDDQKQLDM 68
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+G + +RMA E+++E + +P G V+ F L++ +D+ + DK ++
Sbjct: 69 DQFRDLVGANR--IRMASSESLMEKMHLPAGVVSVFGLLHNVDKDIQVFFDKEILSEPIL 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N +I + T D+ +F++ +G VDL
Sbjct: 127 TFHPNVNTKTIFVKTEDILRFVEELGFSATIVDL 160
>gi|145544571|ref|XP_001457970.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425789|emb|CAK90573.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+K L +L L I + + H V T++ K G KNL DKK +Y++ A
Sbjct: 21 NKQACLEQLTKLGINYIAHHHDPVPTMDDVVKIQVTNGTAYVKNLLYVDKKQNYYLILAN 80
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA-LLLDK 122
T V K+ + LGL G +R++ EE ++E LK G+V PF++ N+S V +++D+
Sbjct: 81 HTTHVG-KLFWKTLGLSSGNMRISKEEQVIEALKSSKGNVNPFSIANDSNNRVKNIIIDE 139
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
++ HP+ N +I ++ +DL +KFLK++ R L
Sbjct: 140 ELTKFQKLALHPIENTTTIEISLDDLQNKFLKALNRQYTITQL 182
>gi|406948498|gb|EKD79199.1| YbaK/prolyl-tRNA synthetase associated region [uncultured
bacterium]
Length = 163
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALAD 65
++ L+ L I + ++ HPAV T AKY I G KNLFL+++K Y+ L
Sbjct: 3 KIYTTLEQLHIPYQEHTHPAVFTSAEAAKYYDTIPGAHVKNLFLRNRKGDTHYLAVVLDH 62
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+V++K L QR LG+ L A E +++ L+V GSV+ LV + + V +L+D+
Sbjct: 63 KRVNLKQLEQR--LGEKQLSFASPERLMKYLQVTPGSVSALGLVFDESHQVQVLVDQECA 120
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
HP N +++L +D KFL G
Sbjct: 121 KAGLINLHPNDNTKTLTLAWSDFKKFLDWCG 151
>gi|421078558|ref|ZP_15539511.1| YbaK/prolyl-tRNA synthetase associated region [Pelosinus fermentans
JBW45]
gi|392523409|gb|EIW46582.1| YbaK/prolyl-tRNA synthetase associated region [Pelosinus fermentans
JBW45]
Length = 162
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 92/163 (56%), Gaps = 5/163 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKY-VGNIGGGLSKNLFLKDKK-HRFYIVS 61
++ ++ +L +L+I++ HPAV T+E + + N+ + KNLFL+D K R +IV
Sbjct: 3 NQQKVFEKLDELKIKYEVMNHPAVYTIEEMDELGIANLDD-VCKNLFLRDYKGKRHFIVV 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
D + D+K + ++LG L A EE + + L++ G+VTPF ++N++ V ++ D
Sbjct: 62 LDKDKQADLKKMREQLG--TTALSFASEERLQKYLQLSKGAVTPFGIINDTNCAVEVVFD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K ++ FHP N ++ ++ +D+ + ++ G AYV +
Sbjct: 120 KDLIGKKSLGFHPNENTATVWVSFDDIKEVIQQNGNKIAYVTM 162
>gi|374315394|ref|YP_005061822.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359351038|gb|AEV28812.1| hypothetical protein SpiGrapes_0987 [Sphaerochaeta pleomorpha str.
Grapes]
Length = 231
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYI 59
+ + ++ + L++L I + H A T+ N+G KNLFL+D+K R F++
Sbjct: 67 LTFMQELIEQTLQNLSIAYRLVHHQAAYTMAEMEALNLNLGCTHVKNLFLRDRKSRKFFL 126
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
D V++++LS +LG+ GGL A + + + L + GSVTP ++N+ R+V ++
Sbjct: 127 FCVKGDKPVNLQLLSIKLGVA-GGLSFANHQQLQDKLGLMPGSVTPLGILNDEKREVTVV 185
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
LD GF E HP N S+ +DL + L Y+DL+
Sbjct: 186 LDSGFTDTELVGVHPNENTASVLFMFSDLVRILVEHKTPIQYMDLK 231
>gi|145505431|ref|XP_001438682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405854|emb|CAK71285.1| unnamed protein product [Paramecium tetraurelia]
Length = 698
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+K L +L L I++ + H V T+E K G KNL DKK +Y++ A
Sbjct: 9 NKQACLDQLTKLGIDYIAHHHDPVPTMEDVVKIKVEEGTAYVKNLLYVDKKSNYYLILAN 68
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA-LLLDK 122
T+V K+ + LGL G +R++ EE + E LK G+V PFA+ N++ V +++D+
Sbjct: 69 NTTQVG-KLFWKTLGLASGNMRLSKEEQIAEALKSSKGNVNPFAVANDTNNLVKNIIIDE 127
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
+R HP+ N ++ ++ +DL +KFLK + R + L
Sbjct: 128 ELTKYKRLALHPIENTTTVEISLDDLQNKFLKILNRQFTVLQL 170
>gi|148545121|ref|YP_001272491.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus reuteri DSM 20016]
gi|184154454|ref|YP_001842795.1| hypothetical protein LAR_1799 [Lactobacillus reuteri JCM 1112]
gi|227364283|ref|ZP_03848376.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
reuteri MM2-3]
gi|325683482|ref|ZP_08162998.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
reuteri MM4-1A]
gi|148532155|gb|ABQ84154.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
reuteri DSM 20016]
gi|183225798|dbj|BAG26315.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070596|gb|EEI08926.1| YbaK/prolyl-tRNA synthetase associated protein [Lactobacillus
reuteri MM2-3]
gi|324977832|gb|EGC14783.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
reuteri MM4-1A]
Length = 164
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 7 QLLARLKDLQI-EFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
Q+ LK+ I +++ +HPA T E Y+ G +K +FLK KK FY+V + D
Sbjct: 8 QVKDALKNFGITDYTVIDHPAAHTTEEADAYIAGHQGVRTKTMFLKGKKKNFYMV--IMD 65
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K M G + MA E + E L + G V+PF L+N A +V + DK
Sbjct: 66 DKKPMDFHEFMALTGAKRVSMARPEYLQEQLGLAPGIVSPFGLLNNEAHNVKVYFDKDIV 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ FHP N +I + T+DL KFLK I +P +DL
Sbjct: 126 DEPIQTFHPNENTHTIFIKTDDLFKFLKQIDFEPEIIDL 164
>gi|407000196|gb|EKE17580.1| YbaK/prolyl-tRNA synthetase associated region [uncultured
bacterium]
Length = 181
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY + L ARL+ L I+ +PA +TVE G++ G +KNL LKDKK + +++S
Sbjct: 13 AYQR--LFARLEGLGIDVDVLSYPAHVTVEEGKVLRGDMAGTFTKNLLLKDKKGKLFLLS 70
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
D +D+K LS +G GKG L E M E+L V G++TP L+N+S + ++D
Sbjct: 71 IHEDRMIDLKSLSSLIG-GKGHLSFVAGERMQELLGVVPGALTPMGLINDSDALITAVVD 129
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 167
+ FHPL N S+ ++ L F++S GR+P VD +A
Sbjct: 130 ASLMTSAQLNFHPLVNTESMGISPAGLVSFVRSCGREPLIVDFDAG 175
>gi|420161883|ref|ZP_14668645.1| YbaK/prolyl-tRNA synthetase associated protein [Weissella koreensis
KCTC 3621]
gi|394744890|gb|EJF33809.1| YbaK/prolyl-tRNA synthetase associated protein [Weissella koreensis
KCTC 3621]
Length = 173
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+ L+ +L L I++ H T++ +++ N+ G +K++ L+DKK+ FY+V
Sbjct: 16 EDLIVKLTSLNIDYKLVHHAPAETIQQADQFIANLKGVRTKSMLLRDKKNNFYLVIMDDS 75
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++D K + GK L +A E + E+L + G ++PF ++ DV + DK
Sbjct: 76 KRLDFKHFQE--VSGKKRLSLAKENEVEELLNLEPGIISPFGVMYSEGHDVDIYFDKDML 133
Query: 126 AQERCF-FHPLSNDMSISLNTNDLDKFLKSIG 156
QE FHP N +I L DL KF+KS G
Sbjct: 134 DQETLLTFHPNENTHTIFLEAEDLMKFIKSYG 165
>gi|253752185|ref|YP_003025326.1| hypothetical protein SSUSC84_1334 [Streptococcus suis SC84]
gi|253754011|ref|YP_003027152.1| hypothetical protein SSU1304 [Streptococcus suis P1/7]
gi|253755945|ref|YP_003029085.1| hypothetical protein SSUBM407_1381 [Streptococcus suis BM407]
gi|386578310|ref|YP_006074716.1| hypothetical protein [Streptococcus suis GZ1]
gi|386580380|ref|YP_006076785.1| hypothetical protein SSUJS14_1454 [Streptococcus suis JS14]
gi|386582394|ref|YP_006078798.1| hypothetical protein SSU12_1371 [Streptococcus suis SS12]
gi|386588580|ref|YP_006084981.1| hypothetical protein SSUA7_1319 [Streptococcus suis A7]
gi|389857013|ref|YP_006359256.1| hypothetical protein SSUST1_1384 [Streptococcus suis ST1]
gi|403061949|ref|YP_006650165.1| hypothetical protein YYK_06270 [Streptococcus suis S735]
gi|251816474|emb|CAZ52110.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818409|emb|CAZ56238.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820257|emb|CAR46712.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292558773|gb|ADE31774.1| hypothetical protein SSGZ1_1318 [Streptococcus suis GZ1]
gi|319758572|gb|ADV70514.1| hypothetical protein SSUJS14_1454 [Streptococcus suis JS14]
gi|353734540|gb|AER15550.1| hypothetical protein SSU12_1371 [Streptococcus suis SS12]
gi|353740731|gb|AER21738.1| hypothetical protein SSUST1_1384 [Streptococcus suis ST1]
gi|354985741|gb|AER44639.1| hypothetical protein SSUA7_1319 [Streptococcus suis A7]
gi|402809275|gb|AFR00767.1| hypothetical protein YYK_06270 [Streptococcus suis S735]
Length = 161
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L DL ++++ EHP +T E +Y+ + G +K++FL +KK FY++ ++DM
Sbjct: 9 LADLGMDYTIVEHPPALTTEEADRYIEGVEGVRTKSMFLTNKKKTAFYLLIMDDQKQLDM 68
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+G + +RMA ++++E + +P G+V+ F L++ +D+ + DK ++
Sbjct: 69 DQFRDLVGANR--IRMASSDSLMEKMHLPAGAVSVFGLLHNVDKDIQVFFDKEILSEPIL 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
FHP N +I + T D+ +F++ IG VD
Sbjct: 127 TFHPNVNTKTIFVKTEDVLRFVEEIGFSATIVD 159
>gi|32399017|emb|CAD98257.1| aminoacyl-tRNA synthetase, probable [Cryptosporidium parvum]
Length = 688
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG----GGLSKNLFLKDKKHR-FYIVS 61
++L +L L I +S+++H A +E+ + + +KNL +K K + + V
Sbjct: 10 EVLDQLSKLSINYSKFDHDATPNMESMVEVLKEQAEKHNTDFAKNLLIKSKGNEGLFFVL 69
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A +T MK L Q G+ LR+A E+ + + LKV G +TP +L+ E + + + D
Sbjct: 70 AHHETDTKMKNLGQIFGVSGNKLRLADEDVLNDTLKVKRGCLTPLSLIFEKSGGIQVYFD 129
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV---DLEANPAVGK 172
+ K ++ F HPL+N S S++ ND+ KF +S G+ + +LE GK
Sbjct: 130 ECLK-DKKVFVHPLTNTESFSIHINDIVKFAESCGKKVKWFSMDNLEEQKPAGK 182
>gi|312115451|ref|YP_004013047.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311220580|gb|ADP71948.1| YbaK/prolyl-tRNA synthetase associated region [Rhodomicrobium
vannielii ATCC 17100]
Length = 171
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSA-LADTKVDM 70
L L I + EH V T + A ++ KN+ ++DK + Y+V+ L +D+
Sbjct: 11 LTSLGIAYETVEHEEVHTAQGLANRDMSLWEFPVKNIVVEDKAKQLYLVTMHLLTPPLDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++LG G A ETM LKV GSVTPFALVN++ R V + D+ A +
Sbjct: 71 KALAKQLG-ADGRFSFASPETMGAALKVLPGSVTPFALVNDTERRVRPIFDERMCASKTV 129
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HPL N M+ ++ +DL + L G +P + L
Sbjct: 130 SAHPLVNTMTTTIAIDDLMRLLGVNGHEPRWCAL 163
>gi|66475910|ref|XP_627771.1| proline-tRNA synthetase; class II aaRS (ybak RNA binding domain
plus tRNA synthetase) [Cryptosporidium parvum Iowa II]
gi|46229315|gb|EAK90164.1| proline-tRNA synthetase; class II aaRS (ybak RNA binding domain
plus tRNA synthetase) [Cryptosporidium parvum Iowa II]
Length = 719
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG----GGLSKNLFLKDKKHR-FYIVS 61
++L +L L I +S+++H A +E+ + + +KNL +K K + + V
Sbjct: 41 EVLDQLSKLSINYSKFDHDATPNMESMVEVLKEQAEKHNTDFAKNLLIKSKGNEGLFFVL 100
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
A +T MK L Q G+ LR+A E+ + + LKV G +TP +L+ E + + + D
Sbjct: 101 AHHETDTKMKNLGQIFGVSGNKLRLADEDVLNDTLKVKRGCLTPLSLIFEKSGGIQVYFD 160
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV---DLEANPAVGK 172
+ K ++ F HPL+N S S++ ND+ KF +S G+ + +LE GK
Sbjct: 161 ECLK-DKKVFVHPLTNTESFSIHINDIVKFAESCGKKVKWFSMDNLEEQKPAGK 213
>gi|406874847|gb|EKD24704.1| hypothetical protein ACD_80C00167G0002 [uncultured bacterium (gcode
4)]
Length = 161
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L+ I ++ Y HPAV T E + + G + KNLFL D+K R ++V + D+
Sbjct: 8 LQSHNITYTPYSHPAVFTCEQAEHFHELVPGMIGKNLFLIDRKSERIFLVVLPIYKRADL 67
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L++ G+ K L E +L+ + + GSV+PF L+N D+ +D E
Sbjct: 68 KFLAKEFGVAK--LSFGSPELLLQKMWLEPGSVSPFGLINNKDHDIEFYIDAEIYNAELV 125
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N S+SL+ + K+L+ I + V L
Sbjct: 126 NFHPNINTASLSLSRDMFHKYLEVIPYETHIVHL 159
>gi|423206862|ref|ZP_17193418.1| hypothetical protein HMPREF1168_03053 [Aeromonas veronii AMC34]
gi|404622414|gb|EKB19279.1| hypothetical protein HMPREF1168_03053 [Aeromonas veronii AMC34]
Length = 164
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + +++HP V T E ++ + ++ +KNLFL+D K R ++V + + +VD+
Sbjct: 7 LDQLAIPYQRFDHPPVFTCEEASRLLPDLPAAKTKNLFLRDPKSERLFLVVSPEENRVDL 66
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+ LG+ + L E + +L + GSVT A+V + + V L++D+ E+
Sbjct: 67 KGLAAMLGVKR--LSFGSPERLDAVLGLTPGSVTLLAMVRDREKAVELVVDEAIWQAEQV 124
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
HPL N ++ + +D+ + L +GR+ + L A
Sbjct: 125 QCHPLVNTATLIIRLDDVRRLLTHLGREAIVMRLPA 160
>gi|377832382|ref|ZP_09815343.1| ybaK/prolyl-tRNA synthetase associated protein [Lactobacillus
mucosae LM1]
gi|377553865|gb|EHT15583.1| ybaK/prolyl-tRNA synthetase associated protein [Lactobacillus
mucosae LM1]
Length = 170
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAV-MTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
A + +LL L+ L I++ +HPA T EA A G IG +K++FLKDKK FY+V
Sbjct: 9 AIAYQELLDELQKLDIKYEMVDHPAAKTTAEADAYIAGKIGVR-TKSMFLKDKKKNFYLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
++D K + G + + MA + + + L + G V+PF ++N +A ++ +
Sbjct: 68 IMDDAKRMDFKEFQELTGTKR--ISMAHDSDIEDQLGLEAGIVSPFGIMNNAAHNIQIYF 125
Query: 121 DKGFKAQER-CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D+ A+ FHP N +I L+ DL KF+K+ G D +DL
Sbjct: 126 DQDMLAENIPLTFHPNINTHTIFLSAADLMKFIKAQGFDYQIIDL 170
>gi|409202692|ref|ZP_11230895.1| hypothetical protein PflaJ_15220 [Pseudoalteromonas flavipulchra
JG1]
Length = 170
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD---KKHRFYIVSALA 64
L RL L I + YEHP + T G KNLFL+D K+H +I+ A
Sbjct: 9 LAERLAQLDINYLNYEHPPLHTCLDADNLKLERKGTRLKNLFLRDNYGKRHFLFIIPA-- 66
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D +VD+K LS+ G+ + G A + + + L V G V+ L N+S + V L LD
Sbjct: 67 DKQVDLKALSKSQGVSRLG--FASTDRLAKYLGVEQGCVSALTLHNDSEQQVELWLDSEL 124
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
++ HPL N + L DL +F + G P +VD
Sbjct: 125 QSAHLWQCHPLVNTKTWVLTLEDLKRFWQVTGHSPHWVD 163
>gi|357639531|ref|ZP_09137404.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
urinalis 2285-97]
gi|418416627|ref|ZP_12989826.1| hypothetical protein HMPREF9318_00574 [Streptococcus urinalis
FB127-CNA-2]
gi|357587985|gb|EHJ57393.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
urinalis 2285-97]
gi|410874445|gb|EKS22376.1| hypothetical protein HMPREF9318_00574 [Streptococcus urinalis
FB127-CNA-2]
Length = 161
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 1 MAYSKDQ-LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYI 59
M Y+K++ L+ I + + +H A+ +V + G KNLFLK+KK + Y
Sbjct: 1 MVYAKEEDAKVLLEQYHIPYEELKHHAITSVRDTDIV---LPGQQVKNLFLKNKKGKHYY 57
Query: 60 VSALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+ L D K+ D+ +++++G + L A E + E+LKVP G+VTPFAL+ + V+L
Sbjct: 58 LIILLDEKMADINRIAEQIG--EKRLSFASSERLEEVLKVPAGTVTPFALLYDQDLKVSL 115
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
+LDK FHP N + ++ D DK +KS+ ++D
Sbjct: 116 ILDKDIDQNVTLGFHPFINTKTWMISFKDFDKLMKSLNHPITFLD 160
>gi|379010427|ref|YP_005268239.1| YbaK-like protein [Acetobacterium woodii DSM 1030]
gi|375301216|gb|AFA47350.1| YbaK-like protein [Acetobacterium woodii DSM 1030]
Length = 163
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M+ + ++ L L+IE+ HP V T E +Y+ + G KNL L++KK +R ++
Sbjct: 1 MSENAQKVFDVLDQLEIEYRVINHPPVYTCEELEQYIEGVEGAHCKNLLLRNKKGNRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V ++D+K + +G+ L A EE + + L V G+V+ F ++N DV +
Sbjct: 61 VILEESKQMDIKNFGKSIGVSN--LSFASEERLQKYLGVSSGAVSVFGVINNDDHDVEVF 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ Q+ HP N +++ T L KFL G ++V +
Sbjct: 119 IDQAMMRQKMINCHPNDNTATVNFETAGLKKFLDQCGNPVSFVTI 163
>gi|114798905|ref|YP_758796.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Hyphomonas
neptunium ATCC 15444]
gi|114739079|gb|ABI77204.1| YbaK/prolyl-tRNA synthetase domain protein [Hyphomonas neptunium
ATCC 15444]
Length = 165
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M S + L A L DL I + H A+ TVE + ++ G +KNLFLKD ++
Sbjct: 1 MPASPEDLFAYLDDLGIAHATTWHEAMFTVEQSSALKADMPGAHTKNLFLKDAGGDLVLI 60
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+A A ++ + L +++ + L E M ++L V GSVT F+L+N+ V L+
Sbjct: 61 AAEAHNQLKLNQLHRKIATKR--LSFGAPELMTDVLGVTPGSVTAFSLMNDQPPRVRFLV 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D + FHPL+N + +++ D +F+++ G VD
Sbjct: 119 DAVLAGADVVNFHPLTNTGTTAISQADFRRFVEATGHSFEVVDF 162
>gi|317472563|ref|ZP_07931882.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
gi|316899972|gb|EFV21967.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
Length = 161
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVE-AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSA 62
K ++L L L I + +HPA T+E +A ++ ++KNLFL+D R ++V A
Sbjct: 2 KQKVLETLDRLHIPYEYEDHPAAYTMEEIEALHLTRPNESIAKNLFLRDGSGKRHFLVLA 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D VD+K L Q +G + L A EE +++ LKV GSV+P ++N+ V + +D+
Sbjct: 62 AGDKPVDLKTLRQTIGSSR--LSFASEERLMKHLKVTKGSVSPMGILNDEHLAVEVFIDE 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
K HP N ++ ++ DL++ ++ G Y+
Sbjct: 120 ELKDSSCIGVHPNDNTATVWISCADLEQVIRHHGNSVTYI 159
>gi|124805808|ref|XP_001350543.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium
falciparum 3D7]
gi|74862875|sp|Q8I5R7.1|SYP_PLAF7 RecName: Full=Proline--tRNA ligase; AltName: Full=Prolyl-tRNA
synthetase; Short=ProRS
gi|23496667|gb|AAN36223.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium
falciparum 3D7]
Length = 746
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L LK+L I F + +H T++ + + KNLFLKDKK ++++ L +
Sbjct: 22 LFKELKELNINFKEVKHGLAATIKDLLEMNLENSTNILKNLFLKDKKKNYFLICTLNNKT 81
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K LS L LR E + IL + G ++P A+ N+ V L D+ K
Sbjct: 82 VDLKNLSN--ILKTNNLRFVDENNLNNILNIQPGCLSPLAIKNDKENIVKLYFDEEIKNM 139
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HPL N S+ + T D+ KF +S P YV +
Sbjct: 140 QEVIIHPLHNYSSLYIKTQDVIKFCESFNHAPEYVQI 176
>gi|310829228|ref|YP_003961585.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740962|gb|ADO38622.1| hypothetical protein ELI_3666 [Eubacterium limosum KIST612]
Length = 163
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L +E+ EHP V T + +Y+ + G KNL L++KK +I+ L ++K +++
Sbjct: 12 LNALGVEYQVIEHPPVYTCDELEQYMDGVKGAHCKNLLLRNKKGNRHILVILEESKQMNI 71
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +++G+ L A EE +L L V G+V+ F ++N+ +V + +D+ QE
Sbjct: 72 KEFGKQIGISN--LSFASEERLLRYLGVTTGAVSVFGIINDQKHEVEVYIDQDVLDQEFV 129
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP N ++ + + L KFL + G
Sbjct: 130 NFHPNVNTSTVHFSADGLKKFLAACG 155
>gi|167749041|ref|ZP_02421168.1| hypothetical protein ANACAC_03822 [Anaerostipes caccae DSM 14662]
gi|167651663|gb|EDR95792.1| YbaK/proline--tRNA ligase associated domain protein [Anaerostipes
caccae DSM 14662]
Length = 161
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVE-AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSA 62
K ++L L L I + +HPA T+E +A ++ ++KNLFL+D R ++V A
Sbjct: 2 KQKVLETLDRLHIPYECEDHPAAYTMEEIEALHLTRPNESIAKNLFLRDGSGKRHFLVLA 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D VD+K L Q +G + L A EE +++ LKV GSV+P ++N+ V + +D+
Sbjct: 62 AGDKPVDLKTLRQTIGSSR--LSFASEERLMKHLKVTKGSVSPMGILNDEHLAVEVFIDE 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
K HP N ++ ++ DL++ ++ G Y+
Sbjct: 120 ELKDSSCIGVHPNDNTATVWISCADLEQVIRHHGNSVTYI 159
>gi|381204036|ref|ZP_09911107.1| prolyl-tRNA synthetase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 166
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA-D 65
+L L + QI + +++HPAV TVE K I GG +KNLF++DKK +++I+ + D
Sbjct: 5 ELYHFLDEHQISYEKFDHPAVYTVEESKKLSPEISGGKTKNLFVRDKKGKYHILLTVEQD 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+VD+K +S+ +G G L + +L+ L V GSV+ ++++ +V +L+D+
Sbjct: 65 KRVDLKKVSEVIGYGP--LSFCSSDRLLKYLGVEPGSVSLLGVLHDMDFEVEVLIDEDLW 122
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ HPL N ++ L +L + +
Sbjct: 123 KEHYLLCHPLVNTSTLRLCREELVRLFQ 150
>gi|410724459|ref|ZP_11363650.1| hypothetical protein A370_01722 [Clostridium sp. Maddingley
MBC34-26]
gi|410602159|gb|EKQ56647.1| hypothetical protein A370_01722 [Clostridium sp. Maddingley
MBC34-26]
Length = 171
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 7/161 (4%)
Query: 1 MAYSKDQLLAR----LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR 56
M+ S D+++ + L +L I+F Y+H V T++ G KNLFL++ K
Sbjct: 5 MSDSSDEVIEKVSRLLNELDIDFKLYKHKEVFTIDDIDNLAIKFDGIYCKNLFLRNSKGD 64
Query: 57 FYIVSALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARD 115
+ + + D+K D+K L++ +G + L A +E + E L + GSVTPF L+N+ +
Sbjct: 65 VHYLLIIKDSKKADLKRLAREIGSTR--LSFASDEVLHEYLVLKPGSVTPFGLINDLNSE 122
Query: 116 VALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
V +LLD ++ FHP N +I+++ L+KFLK G
Sbjct: 123 VVVLLDSDLVGLDKINFHPNINTATITVSYEGLNKFLKYRG 163
>gi|404404275|ref|ZP_10995859.1| hypothetical protein AJC13_02518 [Alistipes sp. JC136]
Length = 171
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKVLSQ 75
I + YEHP T+E ++ + G KNLF ++ K +R Y+V ++ + + L
Sbjct: 24 IRYEWYEHPEAPTIEIARQWWRDDGSKHCKNLFFRNHKGNRHYLVCFDSEQSMAIHDLEH 83
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
RL GK L A E+ M L + GSV+PF L+N+ A V L LD + FHP
Sbjct: 84 RLRQGK--LSFASEQRMERWLGLRPGSVSPFGLINDPANHVHLFLDTNLRQWPSYSFHPN 141
Query: 136 SNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
N ++ ++ + ++L + G +++L
Sbjct: 142 DNRATVVISREEFLRYLAAAGNSYEFIEL 170
>gi|146321342|ref|YP_001201053.1| hypothetical protein SSU98_1495 [Streptococcus suis 98HAH33]
gi|145692148|gb|ABP92653.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
Length = 161
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L DL ++++ EHP +T E +Y+ + G +K++FL +KK FY++ ++DM
Sbjct: 9 LADLGMDYTIVEHPPALTTEEADRYIEGVEGVRTKSMFLTNKKKTAFYLLIMDDQKQLDM 68
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+G + +RMA ++++E + +P G+V+ F L++ +D+ + DK ++
Sbjct: 69 DQFRDLVGANR--IRMASSDSLMEKMHLPAGAVSVFGLLHNVDKDIQVFFDKEILSEPIL 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
FHP N +I + T D+ + +K IG VD
Sbjct: 127 TFHPNVNTKTIFVKTEDVLRLVKKIGFSATIVD 159
>gi|406026437|ref|YP_006725269.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus buchneri CD034]
gi|405124926|gb|AFR99686.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
buchneri CD034]
Length = 161
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVSALAD 65
LLAR+ + + + +HPA+ T++ N GL KNL LKD+K + + + +
Sbjct: 12 LLARVG---VHYRRVDHPAIWTMDDP-----NAPKGLPEVKNLLLKDRKSDQFYLYLVDN 63
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+VD K L+++LGLG L+ A E+ + +L V G VTP ALV+++ V +L++K +
Sbjct: 64 HRVDFKSLAEQLGLGHSRLKFASEKELESLLGVVSGMVTPLALVHDTDDQVKVLINKSLQ 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
HP N +I ++ DL K L ++G+ P ++
Sbjct: 124 TMPEISAHPNVNTATILMSYADLVKVLAAMGKVPTMIE 161
>gi|406677344|ref|ZP_11084527.1| hypothetical protein HMPREF1170_02735 [Aeromonas veronii AMC35]
gi|404624684|gb|EKB21514.1| hypothetical protein HMPREF1170_02735 [Aeromonas veronii AMC35]
Length = 164
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + +++HP V T E +K + ++ +KNLFL+D K R ++V + + +VD+
Sbjct: 7 LDQLAIPYQRFDHPPVFTCEEASKLLPDLPAAKTKNLFLRDPKSERLFLVVSPEEHRVDL 66
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+ L + + L E + +L + GSVT A+V + + V L++D+ E+
Sbjct: 67 KALAAMLRVKR--LSFGSPERLDAVLGLTPGSVTLLAMVRDREKAVELVVDEAIWQAEQV 124
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
HPL N ++ + +D+ + L +GR+ + L A
Sbjct: 125 QCHPLVNTATLIIRLDDVRRLLAHLGREATVMRLSA 160
>gi|330833131|ref|YP_004401956.1| hypothetical protein SSUST3_1345 [Streptococcus suis ST3]
gi|386584523|ref|YP_006080926.1| hypothetical protein SSUD9_1494 [Streptococcus suis D9]
gi|329307354|gb|AEB81770.1| hypothetical protein SSUST3_1345 [Streptococcus suis ST3]
gi|353736669|gb|AER17678.1| hypothetical protein SSUD9_1494 [Streptococcus suis D9]
Length = 161
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L DL +++ EHP +T E +Y+ + G +K++FL +KK FY++ ++DM
Sbjct: 9 LADLGMDYIVVEHPPALTTEEADRYIEGLEGVRTKSMFLTNKKKTAFYLLIMDDQKQLDM 68
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+G + +RMA ++++E + +P G+V+ F L++ +D+ + DK ++
Sbjct: 69 DRFRDLVGANR--IRMASSDSLMEKMHLPAGAVSVFGLLHNVDKDIQVFFDKEILSEPIL 126
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N +I + T D+ +F++ IG VDL
Sbjct: 127 TFHPNVNTKTIFVKTEDVLRFVEEIGFSAKIVDL 160
>gi|226940361|ref|YP_002795435.1| YbaK/prolyl-tRNA synthetase associated region [Laribacter
hongkongensis HLHK9]
gi|226715288|gb|ACO74426.1| YbaK/prolyl-tRNA synthetase associated region [Laribacter
hongkongensis HLHK9]
Length = 166
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+LLA L QI + ++ HP V T E + ++ G +KNLFL+D K + + + + D
Sbjct: 4 ELLAFLDQNQIPYQRFSHPPVFTCEEARQVAPDLPGADTKNLFLRDGKGKRHFLVTMPDH 63
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K V++K LS L + L A E +L L V G+VT + N+S R V ++LD
Sbjct: 64 KSVNLKALSAALEVKN--LTFASPERLLRFLGVTPGAVTLLGVFNDSERAVEVVLDTELW 121
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPA 160
+ HPL N ++S+ T L +FL+ G P
Sbjct: 122 DSDAILAHPLVNTETLSIPTPGLMRFLELSGHPPV 156
>gi|331700927|ref|YP_004397886.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus buchneri NRRL B-30929]
gi|329128270|gb|AEB72823.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
buchneri NRRL B-30929]
Length = 161
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL--SKNLFLKDKKHRFYIVS 61
++ + L L + + + + +HPA+ T++ N GL KNL LKD+K + +
Sbjct: 5 TEQEALDLLAQVGVHYRRVDHPAIWTMDDP-----NAPQGLPEVKNLLLKDRKSDQFYLY 59
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ + +VD K L+++LGLG L+ A EE + +L V G VTP AL++++ V +L++
Sbjct: 60 LVDNHRVDFKSLAEQLGLGHSRLKFASEEELESLLGVVSGMVTPLALMHDTDDQVKVLIN 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
K ++ HP N +I ++ DL K L ++G+ P ++
Sbjct: 120 KSLESMPEISAHPNVNTATILMSYADLVKVLAAMGKVPTMIE 161
>gi|222153476|ref|YP_002562653.1| hypothetical protein SUB1355 [Streptococcus uberis 0140J]
gi|222114289|emb|CAR42929.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 162
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VD 69
LK L I + EHP T E +Y+ G +K +FL +KK Y + + D K +D
Sbjct: 10 HLKKLDIGYDIVEHPPAFTTEEADRYIEGYEGVRTKTMFLTNKKKTAYYLLIMDDQKTLD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M++ + + + +RMA +++ E +KV G V+PF L+N +D+ + DK +
Sbjct: 70 MELFKELVNANR--IRMASAQSLEEKMKVSPGMVSPFGLLNNEGKDIQVYFDKDILKEPI 127
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP N ++ + T D+ F++S+G
Sbjct: 128 QTFHPNDNTKTVFIKTQDILTFIESLG 154
>gi|254975565|ref|ZP_05272037.1| putative regulatory protein [Clostridium difficile QCD-66c26]
gi|255092954|ref|ZP_05322432.1| putative regulatory protein [Clostridium difficile CIP 107932]
gi|255314694|ref|ZP_05356277.1| putative regulatory protein [Clostridium difficile QCD-76w55]
gi|255517369|ref|ZP_05385045.1| putative regulatory protein [Clostridium difficile QCD-97b34]
gi|255650475|ref|ZP_05397377.1| putative regulatory protein [Clostridium difficile QCD-37x79]
gi|260683585|ref|YP_003214870.1| regulatory protein [Clostridium difficile CD196]
gi|260687245|ref|YP_003218379.1| regulatory protein [Clostridium difficile R20291]
gi|306520442|ref|ZP_07406789.1| putative regulatory protein [Clostridium difficile QCD-32g58]
gi|384361206|ref|YP_006199058.1| regulatory protein [Clostridium difficile BI1]
gi|260209748|emb|CBA63533.1| putative regulatory protein [Clostridium difficile CD196]
gi|260213262|emb|CBE04792.1| putative regulatory protein [Clostridium difficile R20291]
Length = 177
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L +E+ EH AV T E G G KNLFL++ K +++Y++ + +VD+
Sbjct: 26 LDKLNVEYDVVEHEAVYTAEQLVILDGITKGCQCKNLFLRNAKGNKYYLIVVKGEKQVDL 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L ++G + L A E + +LK+ GSV PF+L+N++ R V L +DK ++
Sbjct: 86 NSLKDKIGSSR--LSFASPERLYNVLKLLPGSVNPFSLINDTERKVELYIDKDVIKEDYL 143
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSI 155
FHP N +++++ ++FL+ +
Sbjct: 144 NFHPNINTKTVNISRKGFEEFLEYL 168
>gi|330829430|ref|YP_004392382.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Aeromonas
veronii B565]
gi|423209879|ref|ZP_17196433.1| hypothetical protein HMPREF1169_01951 [Aeromonas veronii AER397]
gi|328804566|gb|AEB49765.1| YbaK/prolyl-tRNA synthetase domain protein [Aeromonas veronii B565]
gi|404616780|gb|EKB13731.1| hypothetical protein HMPREF1169_01951 [Aeromonas veronii AER397]
Length = 164
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + + +HP V T E +K + ++ +KNLFL+D K R ++V + + +VD+
Sbjct: 7 LDQLAIPYQRIDHPPVFTCEEASKLLPDLPAAKTKNLFLRDPKSERLFLVVSPEEHRVDL 66
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+ LG+ + L E + +L + GSVT A+V + + V L++D+ E+
Sbjct: 67 KALAAMLGVKR--LSFGSPERLDAVLGLTPGSVTLLAMVRDREKAVELVVDEAIWQAEQV 124
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
HPL N ++ + ND+ + L + R+ + L A
Sbjct: 125 QCHPLVNTATLIIRLNDVRRLLTHLDREAIVMRLPA 160
>gi|254464735|ref|ZP_05078146.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacterales
bacterium Y4I]
gi|206685643|gb|EDZ46125.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacterales
bacterium Y4I]
Length = 175
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN---IGGGLS---KNLFLKDKKHRF 57
S D LL +L D I + + H + TVE AK V + + G + KNL+L+DKK R
Sbjct: 14 SSDALLKQLDDWGIAYRLHTHVPLRTVE-DAKAVEDQFMVPGENALRLKNLYLRDKKKRN 72
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
Y+V+ D ++D+K L R+G G L + +LE L + G+V+P A+ + + V
Sbjct: 73 YLVTLHQDREIDLKGLGARIG--AGNLSFGSADRLLENLGIRPGAVSPLAMTTGAQKGVT 130
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D + + + HPL ND ++++ +D+ F + G
Sbjct: 131 FYMDAAAREADVIYMHPLVNDRTVAMTRDDVMAFFEKTG 169
>gi|255655922|ref|ZP_05401331.1| putative regulatory protein [Clostridium difficile QCD-23m63]
gi|296450656|ref|ZP_06892409.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP08]
gi|296879227|ref|ZP_06903222.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP07]
gi|296260500|gb|EFH07342.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP08]
gi|296429770|gb|EFH15622.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP07]
Length = 179
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L +E+ EH AV T E G G KNLFL++ K +++Y++ + +VD+
Sbjct: 28 LNKLNVEYDVVEHEAVYTAEQLVILDGITKGCQCKNLFLRNAKGNKYYLIVVKGEKQVDL 87
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L ++G + L A E + +LK+ GSV PF+L+N++ R V L +DK ++
Sbjct: 88 NSLKDKIGSSR--LSFASPERLYNVLKLLPGSVNPFSLINDTERKVELYIDKDVLKEDYL 145
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSI 155
FHP N +++++ ++FL+ +
Sbjct: 146 NFHPNINTKTVNISRKGFEEFLEYL 170
>gi|423200024|ref|ZP_17186604.1| hypothetical protein HMPREF1167_00187 [Aeromonas veronii AER39]
gi|404621085|gb|EKB17978.1| hypothetical protein HMPREF1167_00187 [Aeromonas veronii AER39]
Length = 164
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + +++HP V T E +K + ++ +KNLFL+D K R ++V + + +VD+
Sbjct: 7 LDQLAIPYQRFDHPPVFTCEEASKLLPDLPAAKTKNLFLRDPKSERLFLVVSPEEHRVDL 66
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+ LG+ + L E + +L + GSVT A+V + + V L++D+ E+
Sbjct: 67 KALAAMLGVKR--LSFGSPERLDAVLGLTPGSVTLLAMVRDREKAVELVVDEAIWQAEQV 124
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
HPL N ++ + +D+ + L + R+ + L A
Sbjct: 125 QCHPLVNTATLIIRLDDVRRLLTHLDREAIVMRLPA 160
>gi|68076963|ref|XP_680401.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56501321|emb|CAH98677.1| hypothetical protein PB001269.02.0 [Plasmodium berghei]
Length = 384
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L LK+L I + + +H V +++ + KNLFLKDKK +++ +
Sbjct: 20 KLFDELKELNINYKEVKHGKVNSIKDILDLNLEKSENVIKNLFLKDKKKKYFYLCVANWK 79
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
K+D+K +S +L LR +E + IL V GS+TPF++ ++ V L D+ K
Sbjct: 80 KLDLKNVSSQLKTS--NLRFVDDENLKNILNVNPGSLTPFSIKSDKDNIVKLYFDEDIKN 137
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE-----ANPAVGKDQPPDLAAF 181
+ HP+ N I + T D+ K+ P +++L N + +D ++
Sbjct: 138 MDEVIIHPMHNYSCIYVKTTDVIKYCDLHNHTPEFINLSDSKDTENQNIKRDD-TNINEE 196
Query: 182 VPSGSTVLP 190
+ G+T LP
Sbjct: 197 ISKGTTKLP 205
>gi|255101098|ref|ZP_05330075.1| putative regulatory protein [Clostridium difficile QCD-63q42]
gi|255306964|ref|ZP_05351135.1| putative regulatory protein [Clostridium difficile ATCC 43255]
gi|423087020|ref|ZP_17075410.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|423089228|ref|ZP_17077590.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 70-100-2010]
gi|357545269|gb|EHJ27244.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|357558364|gb|EHJ39858.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 70-100-2010]
Length = 177
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L +E+ EH AV T E G G KNLFL++ K +++Y++ + +VD+
Sbjct: 26 LDKLNVEYDVVEHEAVYTAEQLVILDGITKGCQCKNLFLRNAKGNKYYLIVVKGEKQVDL 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L ++G + L A E + +LK+ GSV PF+L+N++ R V L +DK ++
Sbjct: 86 NSLKDKIGSSR--LSFASPERLYNVLKLLPGSVNPFSLINDTERKVELYIDKDVIKEDYL 143
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSI 155
FHP N +++++ ++FL+ +
Sbjct: 144 NFHPNINTKTVNISRKGFEEFLEYL 168
>gi|126699578|ref|YP_001088475.1| oligonucleotide binding regulator [Clostridium difficile 630]
gi|423082686|ref|ZP_17071275.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
gi|115251015|emb|CAJ68844.1| putative oligonucleotide binding regulator [Clostridium difficile
630]
gi|357547804|gb|EHJ29679.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
Length = 183
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L +E+ EH AV T E G G KNLFL++ K +++Y++ + +VD+
Sbjct: 32 LDKLNVEYDVVEHEAVYTAEQLVILDGITKGCQCKNLFLRNAKGNKYYLIVVKGEKQVDL 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L ++G + L A E + +LK+ GSV PF+L+N++ R V L +DK ++
Sbjct: 92 NSLKDKIGSSR--LSFASPERLYNVLKLLPGSVNPFSLINDTERKVELYIDKDVIKEDYL 149
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSI 155
FHP N +++++ ++FL+ +
Sbjct: 150 NFHPNINTKTVNISRKGFEEFLEYL 174
>gi|427440133|ref|ZP_18924647.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Pediococcus lolii NGRI 0510Q]
gi|425787695|dbj|GAC45435.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Pediococcus lolii NGRI 0510Q]
Length = 162
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-V 68
A+L +L I F +P MT Y+ I G +K++FL +++ Y + + D K +
Sbjct: 9 AKLTELNIPFEIVNYPPAMTTAEADSYIKGISGVRTKSMFLTNRRKSAYYLLIMDDQKHL 68
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
DM ++ + + L +A ++++ +K+ G V+PF L+N R V + DK ++
Sbjct: 69 DMHKFAE--IVDEKRLHLASSASLMKKMKLAPGIVSPFGLLNNVERGVQVYFDKDIVDEQ 126
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIG 156
R FHP +N+ +I L T DL KF++++G
Sbjct: 127 RMSFHPNTNEQTIFLATTDLFKFIEAVG 154
>gi|375086187|ref|ZP_09732609.1| hypothetical protein HMPREF9454_01220 [Megamonas funiformis YIT
11815]
gi|374566049|gb|EHR37302.1| hypothetical protein HMPREF9454_01220 [Megamonas funiformis YIT
11815]
Length = 160
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSA 62
+K ++L L D QI F++YEH + +VE K + +NLFL D KK FY+VS
Sbjct: 2 NKAEILQYLTDKQIPFTKYEHEPIFSVEEGDKSNLPNREKVIRNLFLCDAKKKNFYLVSL 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+++K LS+++ + L A +E M ++L+V GSVTP A++N +++ ++ D
Sbjct: 62 FVHKNINLKELSEKIPSKR--LSFAKQEAMEQMLEVKPGSVTPLAILNNKDKNILMIFDS 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ Q HP+ N ++ L DL L G + +DL
Sbjct: 120 ELQNQ-TIGMHPMENTATVFLKFEDLYTLLLPHGNEIRIIDL 160
>gi|406944588|gb|EKD76321.1| hypothetical protein ACD_43C00153G0004 [uncultured bacterium]
Length = 159
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
LK L I++ +++HPAV T AK+ G KNLFL+++K R Y++ + VD+
Sbjct: 8 LKTLNIKYEEHDHPAVFTCVDAAKFYDKFPGARVKNLFLRNRKGDRHYLLIVSDNKTVDL 67
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+Q+ G+ L A E +++ L V GSV+ LV ++ V +L D + E+
Sbjct: 68 KQLAQQ--FGEKQLSFASAERLMKYLHVTPGSVSALGLVYDTDLAVKILCDDSVQQHEQI 125
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGR 157
HP N +I+L DL ++ G
Sbjct: 126 NLHPNINTKTITLTIADLLRYFGHTGH 152
>gi|385816603|ref|YP_005852994.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126640|gb|ADY85970.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 155
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVD 69
+L +L I++ EH +T E +++ I G +K LFL +KK R FY+V +++
Sbjct: 8 KLAELGIDYQLVEHAPALTTEQADEFIEGIPGVRTKTLFLTNKKKRNFYLVIMDDAKRLN 67
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
M + G+ ++MA E+++ E + +P V+PF L+N + D+ + DK ++
Sbjct: 68 MDKFKEI--AGEKQIKMASEKSLFEKMGLPSRVVSPFGLLNNADHDIQVYFDKEIVDED- 124
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP +N+ +I + T DL KFLK++G
Sbjct: 125 --FHPNNNEKTIFIKTEDLFKFLKNLG 149
>gi|182417742|ref|ZP_02949060.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium butyricum
5521]
gi|237667552|ref|ZP_04527536.1| YbaK/prolyl-tRNA synthetase associated protein [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378466|gb|EDT75997.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium butyricum
5521]
gi|237655900|gb|EEP53456.1| YbaK/prolyl-tRNA synthetase associated protein [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 153
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 5/148 (3%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+++L L++L I++ H AV TVE N+ G KNLFLKDK + +Y+ D
Sbjct: 2 NEVLNLLENLHIKYEIVHHRAVYTVEEAESIKINLNGIGCKNLFLKDKNY-YYLYILKDD 60
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+ D+K +S +L + + L + EE + + LK+ GSVTP ++N+ + V L++DK K
Sbjct: 61 KRADLKEISSKLNIKR--LTFSSEEELWDKLKLKKGSVTPMGIINDD-KSVVLIIDKDLK 117
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ HP +N +I ++ ++L K+++
Sbjct: 118 -DKNVLVHPNTNTATICISYDNLIKYIE 144
>gi|288961700|ref|YP_003452010.1| hypothetical protein AZL_c01730 [Azospirillum sp. B510]
gi|288913980|dbj|BAI75466.1| hypothetical protein AZL_c01730 [Azospirillum sp. B510]
Length = 182
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 22 YEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGK 81
+ HP V TV ++ ++ G +KNL LKD K ++V D V+MK L+ +G K
Sbjct: 41 HAHPPVRTVADAEEHWRSVPGVHTKNLLLKDAKGVLWLVVLPHDQSVNMKELAPVIGSAK 100
Query: 82 GGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSI 141
L A T+ ++L + G V+P ALV + R V L+L++ A + FHP++N ++
Sbjct: 101 --LSFASPVTLEQVLSIEPGGVSPLALVADKERRVRLVLERRVLAGDTVNFHPMTNRATL 158
Query: 142 SLNTNDLDKFLKSIGRDPAYVDL 164
S++ +DL FL+ +G +P VDL
Sbjct: 159 SMHPDDLSVFLRRLGYEPIIVDL 181
>gi|365175796|ref|ZP_09363220.1| hypothetical protein HMPREF1006_01165 [Synergistes sp. 3_1_syn1]
gi|363612049|gb|EHL63607.1| hypothetical protein HMPREF1006_01165 [Synergistes sp. 3_1_syn1]
Length = 163
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M +K+++ A+L ++ IE+ EH V T++ + G + KNLFL+D+K + + +
Sbjct: 1 MPLTKEEVRAKLTEMGIEYEAMEHGPVYTIDEMKEVEGMKIEDVCKNLFLRDEKGKRHFL 60
Query: 61 SALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L + K D+K + R +G L EE ++ L + G+VTP ++N+ A++V +L
Sbjct: 61 VVLDEAKSADLKAI--RAQIGSTRLSFGSEERLMANLGLTKGAVTPLGVLNDCAKNVEVL 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + + R HP N ++ L+ + + K ++ G +++ +
Sbjct: 119 IDEDLRGRPRLGVHPCDNTETLWLSFDSIKKIIEKQGNSLSFIRI 163
>gi|145299160|ref|YP_001142001.1| hypothetical protein ASA_2191 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418357491|ref|ZP_12960185.1| hypothetical protein IYQ_03677 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851932|gb|ABO90253.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356689272|gb|EHI53816.1| hypothetical protein IYQ_03677 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 163
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADT 66
L + L L I + +++HP V T E ++ + ++ +KNLFL+D K R ++V ++
Sbjct: 3 LYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQES 62
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K L+ +LG+ + L E + L + G+VT A+V ++ + V L++D+
Sbjct: 63 RVDLKALAAKLGVKR--LSFGSPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQ 120
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
E+ HPL N ++ + +D+ + L +GR+
Sbjct: 121 AEQVQCHPLVNTATLLIRLDDVRRLLTHLGRE 152
>gi|126738049|ref|ZP_01753770.1| YbaK/prolyl-tRNA synthetase domain protein [Roseobacter sp.
SK209-2-6]
gi|126720546|gb|EBA17251.1| YbaK/prolyl-tRNA synthetase domain protein [Roseobacter sp.
SK209-2-6]
Length = 175
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKY-----VGNIGGGLSKNLFLKDKKHRFY 58
S D LL L+DL + ++ +EH + TVE + V + KNL+L+D+K R Y
Sbjct: 14 SSDALLTHLQDLGLAYTLHEHVPLRTVEDAKEVEADMEVPGVHSLKIKNLYLRDRKKRNY 73
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
++S D ++D+K L + +G GL + +LE L + G+V+P A++ + V
Sbjct: 74 LISLEQDREIDLKALGKEIG--APGLSFGSADRLLENLGIRPGAVSPLAMITGVEKGVIF 131
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D + + HPL ND ++ + D F+ IG
Sbjct: 132 YMDSAAQEVDVINMHPLVNDRTVVMTRADFLSFMGRIG 169
>gi|374998733|ref|YP_004974232.1| hypothetical protein AZOLI_p10861 [Azospirillum lipoferum 4B]
gi|357426158|emb|CBS89057.1| Conserved protein of unknown function [YbaK/prolyl-tRNA synthetase
associated domain] [Azospirillum lipoferum 4B]
Length = 176
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 22 YEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGK 81
+ HP V TV ++ ++ G +KNL LKD K ++V D V+MK L+ +G K
Sbjct: 35 HAHPPVRTVADAEEHWRSVPGVHTKNLLLKDAKGVLWLVVLPHDRSVNMKELAPVIGSAK 94
Query: 82 GGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSI 141
L A T+ ++L + G V+P ALV + R V L+L++ A E FHP++N ++
Sbjct: 95 --LSFASPVTLEQVLSIEPGGVSPLALVADKERRVRLVLERRVLAGEVVNFHPMTNRATL 152
Query: 142 SLNTNDLDKFLKSIGRDPAYVDL 164
S++ ++L FL+ +G +P VDL
Sbjct: 153 SMHPDELSAFLRRLGYEPTIVDL 175
>gi|117619172|ref|YP_856636.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560579|gb|ABK37527.1| YbaK/prolyl-tRNA synthetase domain protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 241
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADT 66
L + L L I + + +H V T E ++ + + +KNLFL+D K R ++V ++
Sbjct: 81 LYSLLDQLAIPYQRIDHAPVFTCEEASRLLPKLPAAKTKNLFLRDPKSERLFLVVTPEES 140
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K L+ LG+ + L E + +L + GSVT A+V + + V L++D+
Sbjct: 141 RVDLKGLAAALGVKR--LSFGSPERLESVLGLTPGSVTLLAMVRDREKAVELVVDETIWQ 198
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER HPL N ++ + +D+ + L +GR+ + L
Sbjct: 199 AERVQCHPLVNTATLLIRLDDVRRLLDHLGREATVMRL 236
>gi|408411292|ref|ZP_11182460.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus sp.
66c]
gi|407874523|emb|CCK84266.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus sp.
66c]
Length = 166
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K + L D QI + EH V ++E +KNLF+ D+K R FY++
Sbjct: 2 NKQETYQWLTDHQIPYEVTEHKPVFSMEDLRDVDLPYPEANAKNLFVHDRKKRHFYLILV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ +VD+K +Q+ L L E +++IL + GSVTP L+N+ R V +D
Sbjct: 62 RGEKRVDLKAFAQQQELK--SLSFCSEGDLMDILGLTPGSVTPLGLLNDDERRVHFFIDA 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
F A + HP+ N ++ LN +DL + ++ G + YV++ P
Sbjct: 120 EF-AGNKVAAHPMENTATVWLNADDLVQLVRDHGNEAEYVNIPVLP 164
>gi|260654287|ref|ZP_05859777.1| YbaK/prolyl-tRNA synthetase associated region [Jonquetella anthropi
E3_33 E1]
gi|260630920|gb|EEX49114.1| YbaK/prolyl-tRNA synthetase associated region [Jonquetella anthropi
E3_33 E1]
Length = 162
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSA 62
++ ++ A LK+ I F EH V T+E + G + KNLFL+D K + ++V
Sbjct: 2 TRGEVEAWLKEKGIPFEVTEHEPVFTIEEMERLGLTKLGTVCKNLFLRDGKGTKHFLVVM 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D + D+K LS +L + L A E +++ L + G+VTP ++N+++ V ++LDK
Sbjct: 62 REDRRADLKRLSAQLNASR--LSFASAERLMKYLGLTQGAVTPLGILNDASHQVIVVLDK 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
G ++R HP N ++ ++ DL K ++ G
Sbjct: 120 GLLGEKRLGIHPCENTATLWISCPDLLKVIELCG 153
>gi|423196792|ref|ZP_17183375.1| hypothetical protein HMPREF1171_01407 [Aeromonas hydrophila SSU]
gi|404631542|gb|EKB28173.1| hypothetical protein HMPREF1171_01407 [Aeromonas hydrophila SSU]
Length = 164
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADT 66
L + L L I + + +H V T E ++ + N+ +KNLFL+D K R ++V +
Sbjct: 4 LYSLLDQLAIPYQRIDHAPVFTCEEASRLLPNLPAAKTKNLFLRDPKSERLFLVVTPEQS 63
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K L+ LG+ + L E + +L + GSVT A+V + V L++D+
Sbjct: 64 RVDLKALASALGVKR--LSFGSPERLEAVLGLTPGSVTLLAMVRDRESAVELVVDETIWQ 121
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER HPL N ++ + +D+ + L +GR+ + L
Sbjct: 122 AERVQCHPLVNTATLLIRLDDVRRLLAHLGREATVMRL 159
>gi|424845632|ref|ZP_18270243.1| hypothetical protein JonanDRAFT_1541 [Jonquetella anthropi DSM
22815]
gi|363987070|gb|EHM13900.1| hypothetical protein JonanDRAFT_1541 [Jonquetella anthropi DSM
22815]
Length = 162
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSA 62
++ ++ A LK+ I F EH V T+E + G + KNLFL+D K + ++V
Sbjct: 2 TRGEVEAWLKEKGIPFEVTEHEPVFTIEEMERLGLTKLGTVCKNLFLRDGKGTKHFLVVM 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D + D+K LS +L + L A E +++ L + G+VTP ++N+++ V ++LDK
Sbjct: 62 REDRRADLKRLSAQLNASR--LSFASAERLMKYLGLTQGAVTPLGILNDASHQVIVVLDK 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
G ++R HP N ++ ++ DL K ++ G
Sbjct: 120 GLLGEKRLGIHPCENTATLWISCPDLLKVVELCG 153
>gi|257456878|ref|ZP_05622059.1| YbaK/prolyl-tRNA synthetase associated domain protein [Treponema
vincentii ATCC 35580]
gi|257445587|gb|EEV20649.1| YbaK/prolyl-tRNA synthetase associated domain protein [Treponema
vincentii ATCC 35580]
Length = 163
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+Q+ L+D+ I + EHP +T E KY+ G +K LFL+++ + I+ + +
Sbjct: 5 EQVYKALQDMGISYEVVEHPPALTTEEADKYIEGKEGCRTKTLFLRNRNKKRCILLIMDE 64
Query: 66 TK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K +DMK ++ L + + A E + E L + G V+PF L+N +A DV + DK
Sbjct: 65 VKRLDMKKCAEL--LEEKEFKFASAELLAEKLGLAAGVVSPFGLLNNTAHDVTVYFDKEM 122
Query: 125 KAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
R FHP N ++ +++ DL +F+K+ D +++
Sbjct: 123 LDTYRILTFHPNENTATVFIDSGDLQRFIKNTEHDYFIINV 163
>gi|421837080|ref|ZP_16271361.1| hypothetical protein CFSAN001627_16278, partial [Clostridium
botulinum CFSAN001627]
gi|409740867|gb|EKN40954.1| hypothetical protein CFSAN001627_16278, partial [Clostridium
botulinum CFSAN001627]
Length = 125
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 39 NIGGGLSKNLFLKDKKHRFYIVSALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILK 97
+I G KNLFL+++K + + L D K+ D+K L++ +G L MA EE + + L
Sbjct: 1 DIEGQHCKNLFLRNRKGNIHYLLILCDEKMADLKALAKEIG--STPLSMASEERLYKHLG 58
Query: 98 VPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ GSVTPF L+N S + V +LLDK K + FHP +N +++++ D KFL+ G
Sbjct: 59 LTPGSVTPFGLINNSDKKVKVLLDKDLKHDGKINFHPNTNTATLTIDYKDFYKFLQWSGN 118
Query: 158 D 158
+
Sbjct: 119 E 119
>gi|313110542|ref|ZP_07796427.1| hypothetical protein PA39016_002410129 [Pseudomonas aeruginosa
39016]
gi|386065689|ref|YP_005980993.1| hypothetical protein NCGM2_2756 [Pseudomonas aeruginosa NCGM2.S1]
gi|310882929|gb|EFQ41523.1| hypothetical protein PA39016_002410129 [Pseudomonas aeruginosa
39016]
gi|348034248|dbj|BAK89608.1| hypothetical protein NCGM2_2756 [Pseudomonas aeruginosa NCGM2.S1]
Length = 161
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ Q EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 15 IDSQQVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 71
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 72 IAEQIG--ESRLSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 129
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 130 HPLVNTATECIRYADLLAFLAHTGHEPRLI 159
>gi|167770984|ref|ZP_02443037.1| hypothetical protein ANACOL_02338 [Anaerotruncus colihominis DSM
17241]
gi|167667024|gb|EDS11154.1| YbaK/proline--tRNA ligase associated domain protein [Anaerotruncus
colihominis DSM 17241]
Length = 167
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTK 67
LARL L + + EHPAV T+E + G + KNLFL+D K R ++V + +
Sbjct: 8 LARLDALGVAYELTEHPAVFTIEDMEQLGLTGSGTVCKNLFLRDAKGRRHFLVVIPGNCR 67
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
D+K + +LG + L A E + L + G VTP ++N+ V ++ D+ +
Sbjct: 68 ADLKSIETQLGSTR--LSFASAERLQRYLGLIGGEVTPLGIINDPDAAVEVVFDRSLEGN 125
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
R HP N ++ L +DL + ++ G ++ LE
Sbjct: 126 PRVGVHPNDNTATVWLAFDDLLRIVRDNGNTVHFITLE 163
>gi|85375106|ref|YP_459168.1| DNA-binding protein [Erythrobacter litoralis HTCC2594]
gi|84788189|gb|ABC64371.1| DNA-binding protein, putative [Erythrobacter litoralis HTCC2594]
Length = 164
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L A L L I +EH AV TVE I G +KNLFLKD F +V+ A+ +
Sbjct: 7 LYADLAALSIAHEVHEHSAVFTVEESRAIKAAIPGAHTKNLFLKDAGGAFRLVTVRAEIR 66
Query: 68 VDMKVL-----SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
VD+K L S+R GK E M ++ V GSVTP A++N V LD
Sbjct: 67 VDLKGLPALLTSKRFSFGKA-------EAMERLIGVTPGSVTPLAMINAEPGSVHFALDA 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
ER HPL N ++ L DL + + G + ++
Sbjct: 120 ALAEAERINVHPLRNTATLGLAPGDLMRLMGEWGHEVTVIN 160
>gi|77359249|ref|YP_338824.1| hypothetical protein PSHAa0282 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874160|emb|CAI85381.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 166
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKK-HRFY 58
M K +L A L L I + EHP + +++A A V G L KNLFL+D + R +
Sbjct: 1 MLADKTKLAALLAQLNINYEVIEHPPLHGSLDADAFMVERPGTRL-KNLFLRDNEGKRHF 59
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V D ++D+KVLS++ GL + G A E + LKV G V+ +L+N+ +V++
Sbjct: 60 LVITAHDKQLDLKVLSKQQGLSRLGF--ASSERLARYLKVAPGCVSMLSLMNDKQNEVSV 117
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
LD+ E HP N + LN DL++F P V L
Sbjct: 118 WLDQDIWQGELFHCHPFENTQTWLLNKADLEQFFNFTEHQPRVVFL 163
>gi|365903120|ref|ZP_09440943.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus malefermentans KCTC 3548]
Length = 163
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+Q+ LK+L I + +HPAV T + +Y+ I G +K++F+ +KK + + + D
Sbjct: 5 EQVKQTLKNLDISYQMVDHPAVFTTDEADQYIVGIEGVRTKSMFMTNKKKTAFYLLIMDD 64
Query: 66 TKVDMKVLSQRLGL-------GKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
K RL G ++MA E++ E L + G V+ F L+N RDV +
Sbjct: 65 AK--------RLNFHEFEELTGAKRVKMASPESLQEKLGLAPGMVSIFGLINNQERDVQV 116
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
D+ ++R FHP N +I + T+D+ KF+ ++ D
Sbjct: 117 FFDRDIIEEDRMSFHPNVNTHTIFVATSDVFKFIHAMNFD 156
>gi|107101274|ref|ZP_01365192.1| hypothetical protein PaerPA_01002308 [Pseudomonas aeruginosa PACS2]
Length = 161
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 15 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 71
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E M E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 72 IAEQIGESR--LSFASVERMREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 129
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 130 HPLVNTATECIRYADLLAFLAHTGHEPRLI 159
>gi|365924867|ref|ZP_09447630.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265991|ref|ZP_14768501.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426634|gb|EJE99434.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 166
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 MAY-SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS--KNLFLKDKKHRF 57
M Y +K+Q +A L++LQI + EHP + T+ + GL KNL +K KK
Sbjct: 1 MVYATKEQAIALLENLQINYKMIEHPPLWTMND-----PHAPKGLPEVKNLLIKKKKSDQ 55
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
Y + + VD K+L+ +L + L+ A E + IL V G VTP AL N+ V
Sbjct: 56 YYLFLTTNKPVDFKLLAVQLETSRNKLKFASEAELEGILHVVSGMVTPLALPNDIYHKVQ 115
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+L+D + HP N +I ++ DL K L+SIG P +
Sbjct: 116 VLIDADLQKLPAISAHPNVNTATIIISYEDLIKLLESIGYIPQII 160
>gi|225388215|ref|ZP_03757939.1| hypothetical protein CLOSTASPAR_01950 [Clostridium asparagiforme
DSM 15981]
gi|225045683|gb|EEG55929.1| hypothetical protein CLOSTASPAR_01950 [Clostridium asparagiforme
DSM 15981]
Length = 198
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L + +S+ +H A+ T+EA + +G + KNLFL++ +K FY++ D K
Sbjct: 42 LDSLNVSYSRVDHDALPTIEACQEVDRLLGTEICKNLFLRNAQKTDFYLLLMPGDKKFKT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
LS+++G + L A E + +L + GSVT L+N++ + V LL+DK ++E
Sbjct: 102 AALSKQIGSAR--LSFAEPEFLESLLGLTPGSVTVLGLMNDTEKQVRLLIDKDVLSREDF 159
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ T D LDK L ++G VDL
Sbjct: 160 ACHPCINTSSLKFKTRDLLDKVLPALGHPHTLVDL 194
>gi|83282659|ref|XP_729866.1| prolyl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
gi|23488909|gb|EAA21431.1| prolyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
Length = 728
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
+L LK+L I + + +H V +++ + KNLFLKDKK ++ +
Sbjct: 20 KLFDELKELNINYKEVKHGKVNSIKEILDLNLEKSENVIKNLFLKDKKKNYFYLCVANWK 79
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
K+D+K +S +L LR +E + IL V GS+TPF++ ++ V L D+ K
Sbjct: 80 KLDLKNVSTQLKTS--NLRFVDDENLKNILNVNPGSLTPFSIKSDKDNIVKLYFDEDIKN 137
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP+ N I + T D+ K+ P +++L
Sbjct: 138 MDEVIIHPMHNYSCIYVKTTDVIKYCDLHNHTPEFINL 175
>gi|392547058|ref|ZP_10294195.1| hypothetical protein PrubA2_11830 [Pseudoalteromonas rubra ATCC
29570]
Length = 171
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV-SALAD 65
QL A L L I + Y+HP + T + K G KNLFL+D R +I+ AD
Sbjct: 8 QLAALLHKLDIIYQAYQHPPLATCQDADKLALERSGTRLKNLFLRDNYGRQHILLITTAD 67
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
++D+K LS++ L + G A + + + L + G V+ A+ N+ + V L LD+
Sbjct: 68 KQIDLKALSKQQDLSRIG--FASDSRLQQYLGIKPGCVSALAVANDPEQQVQLWLDEALS 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND + L+ DL +F + G P ++
Sbjct: 126 DAVLWQCHPFENDKTWVLSLADLTRFWQHTGHQPVWL 162
>gi|420156980|ref|ZP_14663820.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sp. MSTE9]
gi|394756990|gb|EJF40049.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sp. MSTE9]
Length = 164
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L Q+ + EHPAV T+E ++KNLFL+D KK +Y+V+ V++
Sbjct: 13 LDQYQMTYEACEHPAVYTIEEMDALNLPHSERVAKNLFLRDDKKLHYYLVTVPGHKTVNL 72
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++ K L A EE++ E+L + G VTP ++N + ++V ++ DK + Q+
Sbjct: 73 KSLSEKIASRK--LTFASEESLRELLMLEKGHVTPLGVLNNAEKNVIVVFDKSLQNQQ-I 129
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
HP+ N +I + D++K ++ G D E
Sbjct: 130 GIHPMENTATIFMAFEDVEKLVEDHGNPIVKCDFE 164
>gi|390631403|ref|ZP_10259341.1| YbaK/proline--tRNA ligase associated domain protein [Weissella
confusa LBAE C39-2]
gi|390483403|emb|CCF31689.1| YbaK/proline--tRNA ligase associated domain protein [Weissella
confusa LBAE C39-2]
Length = 162
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALA 64
+Q+ +LK L I ++ EHP V T E K + G +K L L + K +Y+V
Sbjct: 5 EQVAQKLKSLGIGYTSVEHPPVFTTEEADKLIAGYAGTRTKTLLLNNSNKTEYYLVVMSD 64
Query: 65 DTKVDMK-----VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
+ ++D+K V S RL + +PE +++ P GSV+ F L+N DV +
Sbjct: 65 NVRLDLKKFQSTVQSTRLSMA------SPERLKIKLGVTP-GSVSVFGLLNNVDHDVRVY 117
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
D+ + E FHP N + + T D+ KF++ +G +P V L
Sbjct: 118 FDEQIVSTEMLVFHPNDNTQTWFIKTGDVMKFVQEMGFEPNIVAL 162
>gi|359448873|ref|ZP_09238385.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20480]
gi|358045310|dbj|GAA74634.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20480]
Length = 166
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L A L L I + EHP + T A + + G KNLFL+D + R ++
Sbjct: 1 MLADKTKLEACLAHLNINYDVIEHPPLHTSLAADELLLERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ V +
Sbjct: 61 VITAHNKQLDLKALSKQQGLSRLG--FASSERLATYLKVAPGCVSMLALLNDKQNAVTVW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ E HP N ++ L+ +DL+ F K G P
Sbjct: 119 LDQDIWFGELFHCHPFENTLTWILSKSDLETFFKHTGHQP 158
>gi|332523885|ref|ZP_08400137.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
porcinus str. Jelinkova 176]
gi|332315149|gb|EGJ28134.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
porcinus str. Jelinkova 176]
Length = 162
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
AY K L LK I + EHPAV T E +Y+ G +K++FL +KK Y +
Sbjct: 3 AYEK--LATYLKKEGIAYDVVEHPAVFTTEEADRYIEGYEGVRTKSMFLTNKKKTSYYLV 60
Query: 62 ALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ D K +DM + + +RMA E++ + + + GSV+PF L+N +D+ +
Sbjct: 61 IMDDAKSLDMDSFKDIVHTNR--IRMASVESLQQKMGLTPGSVSPFGLLNNQEKDIQVYF 118
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
D+ + FHP N +I + T D+ F++++G
Sbjct: 119 DQDILGKPVQTFHPNDNTKTIFVKTEDIIHFIENLG 154
>gi|167751880|ref|ZP_02424007.1| hypothetical protein ALIPUT_00122 [Alistipes putredinis DSM 17216]
gi|167660121|gb|EDS04251.1| YbaK/proline--tRNA ligase associated domain protein [Alistipes
putredinis DSM 17216]
Length = 164
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKVLS 74
+I + Y HPA T+E + G KNLF ++ K R Y+V D + + L
Sbjct: 15 KIRYDIYHHPASPTIEEAKAHWREDGSKHCKNLFFRNHKGDRHYLVCFDCDRSLAIHDLE 74
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
RL GK L A + M L + GSV+PF L+N++ V L LD+ + + FHP
Sbjct: 75 HRLRQGK--LTFASPQRMERYLGLEPGSVSPFGLINDAEHHVHLFLDRHLQTCDSLSFHP 132
Query: 135 LSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ ++ + +++L +G Y+DL
Sbjct: 133 NDCRATVVISRPEFERYLSLVGNTYEYLDL 162
>gi|421140291|ref|ZP_15600307.1| hypothetical protein MHB_13278 [Pseudomonas fluorescens BBc6R8]
gi|404508498|gb|EKA22452.1| hypothetical protein MHB_13278 [Pseudomonas fluorescens BBc6R8]
Length = 169
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M KD +L L I + EH AV T E K I G KN+FL D K +
Sbjct: 1 MLQPKD-VLHLLDTCSIAYEYVEHSAVRTCEEADKLDIGISGQAVKNIFLCDAKGLNPTL 59
Query: 61 SAL-ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L ++ ++D++ LSQ LGL GLR A ++E L V G+V+ L N+ R ++
Sbjct: 60 VVLKSEQRLDLRALSQTLGLK--GLRFASPRRLMETLGVEPGAVSLLGLCNDVQRATQVV 117
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKD 173
+ + +R HPL N ++S+ D+ + L+ +G P L ANPA D
Sbjct: 118 IAEEVWNGDRILCHPLVNTATLSIAVRDMARLLEHLGFTPI---LAANPAPTPD 168
>gi|331092354|ref|ZP_08341180.1| hypothetical protein HMPREF9477_01823 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401378|gb|EGG80964.1| hypothetical protein HMPREF9477_01823 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 177
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L+ LQI F + +H T+EA K + + KNLFL ++ K F+++ D K
Sbjct: 25 LEKLQIPFERMDHEVADTMEACEKIDEKLQVTMCKNLFLCNRQKTTFFLLLMPGDKKFLT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS++LG+ + L A E M + L + GSV+ L+N+ + V L++DK E
Sbjct: 85 KNLSKQLGISR--LSFAEAEYMEKFLDITPGSVSVLGLMNDVEKQVTLIIDKDLLEGEYI 142
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ L T+D L+KFL G P V L
Sbjct: 143 GCHPCVNTSSLKLKTSDILEKFLTYTGHTPTLVTL 177
>gi|15597038|ref|NP_250532.1| hypothetical protein PA1841 [Pseudomonas aeruginosa PAO1]
gi|218892203|ref|YP_002441070.1| hypothetical protein PLES_34841 [Pseudomonas aeruginosa LESB58]
gi|421181062|ref|ZP_15638580.1| hypothetical protein PAE2_3043 [Pseudomonas aeruginosa E2]
gi|9947828|gb|AAG05230.1|AE004610_3 hypothetical protein PA1841 [Pseudomonas aeruginosa PAO1]
gi|218772429|emb|CAW28211.1| hypothetical protein PLES_34841 [Pseudomonas aeruginosa LESB58]
gi|404544290|gb|EKA53479.1| hypothetical protein PAE2_3043 [Pseudomonas aeruginosa E2]
Length = 165
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 19 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 75
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 76 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 133
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 134 HPLVNTATECIRYADLLAFLAHTGHEPRLI 163
>gi|386059264|ref|YP_005975786.1| hypothetical protein PAM18_3201 [Pseudomonas aeruginosa M18]
gi|416854357|ref|ZP_11910835.1| hypothetical protein PA13_03228 [Pseudomonas aeruginosa 138244]
gi|418585624|ref|ZP_13149672.1| hypothetical protein O1O_13123 [Pseudomonas aeruginosa MPAO1/P1]
gi|418591378|ref|ZP_13155277.1| hypothetical protein O1Q_12211 [Pseudomonas aeruginosa MPAO1/P2]
gi|421516484|ref|ZP_15963170.1| hypothetical protein A161_09435 [Pseudomonas aeruginosa PAO579]
gi|451982718|ref|ZP_21931020.1| COG3760, similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Pseudomonas aeruginosa 18A]
gi|334844192|gb|EGM22770.1| hypothetical protein PA13_03228 [Pseudomonas aeruginosa 138244]
gi|347305570|gb|AEO75684.1| hypothetical protein PAM18_3201 [Pseudomonas aeruginosa M18]
gi|375044313|gb|EHS36922.1| hypothetical protein O1O_13123 [Pseudomonas aeruginosa MPAO1/P1]
gi|375049918|gb|EHS42406.1| hypothetical protein O1Q_12211 [Pseudomonas aeruginosa MPAO1/P2]
gi|404350212|gb|EJZ76549.1| hypothetical protein A161_09435 [Pseudomonas aeruginosa PAO579]
gi|451759495|emb|CCQ83543.1| COG3760, similarity to aminoacyl-tRNA editing enzymes YbaK, ProX
[Pseudomonas aeruginosa 18A]
gi|453047206|gb|EME94921.1| hypothetical protein H123_08742 [Pseudomonas aeruginosa PA21_ST175]
Length = 161
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 15 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 71
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 72 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 129
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 130 HPLVNTATECIRYADLLAFLAHTGHEPRLI 159
>gi|414069632|ref|ZP_11405624.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. Bsw20308]
gi|410807862|gb|EKS13836.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. Bsw20308]
Length = 166
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L L I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MFADKTKLAELLAHLDINYDVIEHPPLHTSLAADEFMIERPGTRLKNLFLRDNEGRRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D ++D+KVLS++ GL + G A E + + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHDKQLDLKVLSKQQGLSRLGF--ASSERLAKYLKVAPGCVSMLALLNDKQNEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWGGDLFHCHPFENTQTWLLSKADLETFFNYTKHQPRVVFL 163
>gi|332653838|ref|ZP_08419582.1| putative DNA-binding protein [Ruminococcaceae bacterium D16]
gi|332516924|gb|EGJ46529.1| putative DNA-binding protein [Ruminococcaceae bacterium D16]
Length = 186
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVD 69
+L++L IEF++ +H T+E K +G + KNLFL +++ FY++ D
Sbjct: 26 KLEELGIEFARVDHDHADTMEDCLKIESILGAKICKNLFLCNRQQTEFYLLMMPGDKPFK 85
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K LS +LG + L A E M + L GSV+ L+ + V L++D+ E
Sbjct: 86 TKFLSAQLGCSR--LSFADENHMRDYLSTIPGSVSALELLFDKENKVRLVIDRDLMNDEY 143
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP + +I L DL K+++++G +P Y+DL
Sbjct: 144 ISGHPGISTSTIRLKKEDLLKYVQAVGHEPTYIDL 178
>gi|430835127|ref|ZP_19453123.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0679]
gi|430836822|ref|ZP_19454799.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0680]
gi|430839854|ref|ZP_19457791.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0688]
gi|430859362|ref|ZP_19476974.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1552]
gi|430484556|gb|ELA61530.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0679]
gi|430488145|gb|ELA64838.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0680]
gi|430490303|gb|ELA66835.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0688]
gi|430543723|gb|ELA83778.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1552]
Length = 161
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ + ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVK---NVLFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KELAEQLK--ENRLSFVSEEQLPDLLGVPAGTVTPLALIHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|49081552|gb|AAT50176.1| PA1841, partial [synthetic construct]
Length = 166
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 19 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDDRKEADLPG 75
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 76 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 133
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 134 HPLVNTATECIRYADLLAFLAHTGHEPRLI 163
>gi|411009169|ref|ZP_11385498.1| prolyl-tRNA synthetase [Aeromonas aquariorum AAK1]
Length = 186
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADT 66
L + L L I + + +H V T E ++ + ++ +KNLFL+D K R ++V +
Sbjct: 26 LYSLLDQLAIPYQRIDHAPVFTCEEASRLLPDLPAAKTKNLFLRDPKSERLFLVVTPEQS 85
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K L+ LG+ + L E + +L + GSVT A+V + V L++D+
Sbjct: 86 RVDLKALASALGVKR--LSFGSPERLEAVLGLTPGSVTLLAMVRDRESAVELVVDETIWQ 143
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
ER HPL N ++ + +D+ + L +GR+
Sbjct: 144 AERVQCHPLVNTATLLIRLDDVRRLLAHLGRE 175
>gi|406948777|gb|EKD79421.1| hypothetical protein ACD_41C00079G0001 [uncultured bacterium]
Length = 163
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L I + ++ HPA+ T AKY +I G KNLFL+++ ++ Y+ L KVD+
Sbjct: 8 LVQLHIPYQEHTHPAIFTSAEAAKYFEHIPGAHVKNLFLRNRNGNQHYLAVVLDHKKVDL 67
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L++ L + L A E +++ L V GSV+ L+ ++A V +L+D+
Sbjct: 68 KQLAK--SLNESQLGFASPERLMKYLNVTPGSVSALGLIFDTAHHVNVLVDQDCAQYGSI 125
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIG 156
HP N ++++ +D K+L G
Sbjct: 126 NLHPNDNTKTLTVGWSDFKKYLDWCG 151
>gi|296389766|ref|ZP_06879241.1| hypothetical protein PaerPAb_16521 [Pseudomonas aeruginosa PAb1]
gi|392984684|ref|YP_006483271.1| hypothetical protein PADK2_16450 [Pseudomonas aeruginosa DK2]
gi|416872375|ref|ZP_11916613.1| hypothetical protein PA15_00952 [Pseudomonas aeruginosa 152504]
gi|419755291|ref|ZP_14281646.1| hypothetical protein CF510_19959 [Pseudomonas aeruginosa
PADK2_CF510]
gi|424941072|ref|ZP_18356835.1| hypothetical protein NCGM1179_2232 [Pseudomonas aeruginosa
NCMG1179]
gi|334845904|gb|EGM24462.1| hypothetical protein PA15_00952 [Pseudomonas aeruginosa 152504]
gi|346057518|dbj|GAA17401.1| hypothetical protein NCGM1179_2232 [Pseudomonas aeruginosa
NCMG1179]
gi|384397988|gb|EIE44396.1| hypothetical protein CF510_19959 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392320189|gb|AFM65569.1| hypothetical protein PADK2_16450 [Pseudomonas aeruginosa DK2]
Length = 161
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 15 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 71
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 72 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 129
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 130 HPLVNTATECIRYADLLAFLAHTGHEPRLI 159
>gi|116049793|ref|YP_791400.1| hypothetical protein PA14_40700 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234937|ref|ZP_04928260.1| hypothetical protein PACG_00812 [Pseudomonas aeruginosa C3719]
gi|254240235|ref|ZP_04933557.1| hypothetical protein PA2G_00877 [Pseudomonas aeruginosa 2192]
gi|355643946|ref|ZP_09053574.1| hypothetical protein HMPREF1030_02660 [Pseudomonas sp. 2_1_26]
gi|421154469|ref|ZP_15613974.1| hypothetical protein PABE171_3335 [Pseudomonas aeruginosa ATCC
14886]
gi|421168512|ref|ZP_15626592.1| hypothetical protein PABE177_3383 [Pseudomonas aeruginosa ATCC
700888]
gi|421175032|ref|ZP_15632729.1| hypothetical protein PACI27_3249 [Pseudomonas aeruginosa CI27]
gi|115585014|gb|ABJ11029.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166868|gb|EAZ52379.1| hypothetical protein PACG_00812 [Pseudomonas aeruginosa C3719]
gi|126193613|gb|EAZ57676.1| hypothetical protein PA2G_00877 [Pseudomonas aeruginosa 2192]
gi|354829437|gb|EHF13509.1| hypothetical protein HMPREF1030_02660 [Pseudomonas sp. 2_1_26]
gi|404521870|gb|EKA32424.1| hypothetical protein PABE171_3335 [Pseudomonas aeruginosa ATCC
14886]
gi|404529449|gb|EKA39486.1| hypothetical protein PABE177_3383 [Pseudomonas aeruginosa ATCC
700888]
gi|404532985|gb|EKA42838.1| hypothetical protein PACI27_3249 [Pseudomonas aeruginosa CI27]
Length = 165
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 19 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 75
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 76 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 133
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 134 HPLVNTATECIRYADLLAFLAHTGHEPRLI 163
>gi|359455923|ref|ZP_09245128.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20495]
gi|358047000|dbj|GAA81377.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20495]
Length = 166
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L L I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MLADKTKLAELLAHLDINYDVIEHPPLHTSLAADEFMIERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D ++D+KVLS++ GL + G A E + + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHDKQLDLKVLSKQQGLSRLGF--ASSERLAKYLKVAPGCVSMLALLNDKQNEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWGGDLFHCHPFENTQTWLLSKADLETFFNYTKHQPRVVFL 163
>gi|420140103|ref|ZP_14647879.1| hypothetical protein PACIG1_3402 [Pseudomonas aeruginosa CIG1]
gi|421161146|ref|ZP_15620112.1| hypothetical protein PABE173_3687 [Pseudomonas aeruginosa ATCC
25324]
gi|403247113|gb|EJY60793.1| hypothetical protein PACIG1_3402 [Pseudomonas aeruginosa CIG1]
gi|404540608|gb|EKA50005.1| hypothetical protein PABE173_3687 [Pseudomonas aeruginosa ATCC
25324]
Length = 165
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 19 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 75
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++G + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 76 IAEQIGESR--LSFASVERLREYLGVELGCVTPFALVNDPRHRVEVLLDDAIRQDQLLGF 133
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 134 HPLVNTATECIRYADLLAFLAHTGHEPRLI 163
>gi|392556679|ref|ZP_10303816.1| hypothetical protein PundN2_14691 [Pseudoalteromonas undina NCIMB
2128]
Length = 166
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L A L L IE+ EHPA+ K + N G KNLFL+D + R ++
Sbjct: 1 MLADKQKLAAVLAQLNIEYDIIEHPALHGSLDADKLMVNRPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D ++D+K L+++ GL + G A E + + LKV G V+ +L+N+ RDV L
Sbjct: 61 VITAHDKQLDLKSLAKQQGLSRLGF--ASNERLAKYLKVAPGCVSMLSLMNDKQRDVTLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ + HP N + L DL +F P
Sbjct: 119 LDQDIWFGDLFHCHPFENTQTWLLTKPDLLRFFDFTEHQP 158
>gi|374335475|ref|YP_005092162.1| hypothetical protein GU3_08280 [Oceanimonas sp. GK1]
gi|372985162|gb|AEY01412.1| hypothetical protein GU3_08280 [Oceanimonas sp. GK1]
Length = 161
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD---KKHRFYIVSALA 64
++ARL D I EHP + + + + + + G KNLFL+D +KH +
Sbjct: 3 IMARLADWHITPPLIEHPPLHSCDDADRLLVDRPGTRLKNLFLRDNYGRKHALLLTPP-- 60
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ +VD+K LS++ G + G A E + L V G V+ ALVN++ + V L LD+
Sbjct: 61 NKQVDLKALSRQQGWSRLGF--ASAERLDRYLGVAPGHVSVLALVNDAQQQVELWLDEDL 118
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+ + HPL N ++ L+ DL +F + G P ++
Sbjct: 119 QDGDNFHCHPLRNTATVLLSRADLQRFTEQTGHTPVWL 156
>gi|124088770|ref|XP_001347228.1| Prolyl-tRNA synthetase [Paramecium tetraurelia strain d4-2]
gi|145474039|ref|XP_001423042.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057617|emb|CAH03601.1| Prolyl-tRNA synthetase, putative [Paramecium tetraurelia]
gi|124390102|emb|CAK55644.1| unnamed protein product [Paramecium tetraurelia]
Length = 652
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 41 GGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPL 100
G KNL DKK +Y++ A T+V K+ + LGL G +R++ EE + + LK
Sbjct: 12 GTAYVKNLLYVDKKSNYYLILANHTTQVG-KLFWKTLGLSSGNIRLSKEEQIADALKSSK 70
Query: 101 GSVTPFALVNESARDVA-LLLDKGFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRD 158
G+V PFA+ N++ V +++D+ +R HP+ N +I ++ +DL +KFLK+I R
Sbjct: 71 GNVNPFAVANDTNNLVKNIIIDEELTKFQRLALHPIENTTTIEISLDDLQNKFLKAINRQ 130
Query: 159 PAYVDLEANPA 169
+ L + A
Sbjct: 131 CKVIQLTDSAA 141
>gi|295693357|ref|YP_003601967.1| ybak/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus ST1]
gi|295031463|emb|CBL50942.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus ST1]
Length = 162
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
++L L D I + + HPAV T E KY+ + KN+F+K + + +Y++ +
Sbjct: 5 EILQLLDDHDISYQVFSHPAVYTSEEADKYLKDKDFAKCKNVFIKSRNGKNYYLLMLPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK-GF 124
KVD K + L L A E+ + E LKV G+V+PF L+N+S+ + L++D+
Sbjct: 65 KKVDWK--KAQSELLSPSLTFASEDELEEKLKVKSGTVSPFNLLNDSSNTIPLIVDQAAM 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ HP N +ISL DL + L S G
Sbjct: 123 EENNYVGVHPNDNTKTISLTWTDLARILSSYGH 155
>gi|302672022|ref|YP_003831982.1| prolyl-tRNA synthetase [Butyrivibrio proteoclasticus B316]
gi|302396495|gb|ADL35400.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 183
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H T+EA + +G + KNLFL ++ K RFY++ D K
Sbjct: 25 LDRLGIEYKRVDHEPANTMEACEEVDKVLGTLMCKNLFLCNRQKTRFYLLLMPGDKKFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E ML+ L + G+V+ L+N+ +V LL+D+ K E
Sbjct: 85 KELSSQINSAR--LSFAEAEDMLKYLDIEPGAVSVMGLMNDKNHEVQLLVDEDLKTSEFF 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEANPAVGKDQ 174
HP S+ + T D+ +KFL +G +P V L VG+D+
Sbjct: 143 GCHPCVCTSSLKIRTTDIFEKFLPEVGHEPQTVHL-----VGEDR 182
>gi|430820564|ref|ZP_19439192.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0045]
gi|430829308|ref|ZP_19447404.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0269]
gi|431204826|ref|ZP_19500703.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1620]
gi|430439439|gb|ELA49791.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0045]
gi|430481214|gb|ELA58375.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0269]
gi|430571349|gb|ELB10265.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1620]
Length = 161
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
LK L I F + +HPA+ +V+ + ++ G KNL LK +K + Y+V + D+
Sbjct: 13 LKKLDISFQKVDHPAITSVK---NVLFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KELAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|395786866|ref|ZP_10466593.1| hypothetical protein ME5_01911 [Bartonella tamiae Th239]
gi|423718215|ref|ZP_17692405.1| hypothetical protein MEG_01945 [Bartonella tamiae Th307]
gi|395423164|gb|EJF89360.1| hypothetical protein ME5_01911 [Bartonella tamiae Th239]
gi|395426648|gb|EJF92775.1| hypothetical protein MEG_01945 [Bartonella tamiae Th307]
Length = 175
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L L L+I + + H A+ V + I GG +K FLKDKK ++++V
Sbjct: 13 LFDFLNKLEIVVTTHYHEALFKVSEGEQIKAKISGGHTKKFFLKDKKGQYFLVILEDYAL 72
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K L + +G G L E + + L + G+V+ F L+N+ V L+LDK
Sbjct: 73 VDLKQLHKIIG-ASGRLSFGSAEKLSQYLGLYPGAVSVFGLLNDKENHVRLILDKDLMQN 131
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAV 170
HPL+N+ + S++ +DL KF+++ D + + N +
Sbjct: 132 IYINCHPLTNEATTSIHRDDLLKFVEATHHDVRILHISQNQGL 174
>gi|358067925|ref|ZP_09154397.1| hypothetical protein HMPREF9333_01278 [Johnsonella ignava ATCC
51276]
gi|356693894|gb|EHI55563.1| hypothetical protein HMPREF9333_01278 [Johnsonella ignava ATCC
51276]
Length = 181
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I++ + +H T+EA A + + KNLFL +++ Y + + +K
Sbjct: 25 LDKLGIKYDRVDHEHAETMEACADIEKALETEVCKNLFLCNRQKTVYYLLLMPGSKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E M +IL V GSVT L+N+SAR V LL+DK QE
Sbjct: 85 KELSSQINAAR--LSFASGEDMEKILGVTPGSVTVLGLINDSARSVQLLIDKDLTKQEYI 142
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEANPAVGKD 173
HP N ++ + T+D L K L ++ P YV L GKD
Sbjct: 143 GCHPCMNTSTLKIKTDDILKKILPALKHRPTYVRL-----TGKD 181
>gi|310827758|ref|YP_003960115.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308739492|gb|ADO37152.1| hypothetical protein ELI_2169 [Eubacterium limosum KIST612]
Length = 161
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALA 64
++ L+RL L I + + +HPAV T+ + KNLFL+D K R ++V
Sbjct: 4 EETLSRLDALGITYEKLDHPAVYTIGEMDNLDITSKCNVVKNLFLRDAKGKRHFLVVLDK 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D K D+ + ++LG K L A EE +++ L++ G+VTP + +V ++LDK
Sbjct: 64 DKKADLAGIREQLGCSK--LSFASEERLMKHLQLTKGAVTPLGVFGNPEANVEVVLDKDL 121
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP N ++ L+ DL K ++S G A ++L
Sbjct: 122 EGCPNLGVHPCDNTATVVLSYEDLVKCIESNGNSIALLNL 161
>gi|293553341|ref|ZP_06673977.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
E1039]
gi|425057373|ref|ZP_18460794.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 504]
gi|431451871|ref|ZP_19514051.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1630]
gi|431760791|ref|ZP_19549384.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3346]
gi|291602565|gb|EFF32781.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
E1039]
gi|403040609|gb|EJY51673.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 504]
gi|430585050|gb|ELB23353.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1630]
gi|430623273|gb|ELB59968.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3346]
Length = 161
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ + ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVK---NVLFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KELAEQLK--ENRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|346991545|ref|ZP_08859617.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Ruegeria sp.
TW15]
Length = 176
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLS---KNLFLKDKKHRFY 58
S D LLA+L + + + + H + TVE G + G + KNL+L+DKK R Y
Sbjct: 14 SSDALLAQLDEWGLSYRLHTHIPLRTVEDAKGVEGQFMVPGENTLRLKNLYLRDKKKRNY 73
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V+ ++D+K L LG+G L + + + L + G+V+P A++N +V
Sbjct: 74 LVTLEQSREIDLKALGAELGIGN--LSFGSADRLFQNLGIRPGAVSPLAMINGVENNVKF 131
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+D+ + + HPL ND ++ L DL F IG + ++
Sbjct: 132 FMDEAAQQADVINMHPLVNDRTVVLVREDLMAFFDKIGCEVTWL 175
>gi|315127871|ref|YP_004069874.1| hypothetical protein PSM_A2810 [Pseudoalteromonas sp. SM9913]
gi|315016385|gb|ADT69723.1| hypothetical protein PSM_A2810 [Pseudoalteromonas sp. SM9913]
Length = 166
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKK-HRFY 58
M K +L A L L IE+ EHPA+ +++A V G L KNLFL+D + R +
Sbjct: 1 MLADKQKLAAVLTQLNIEYDVIEHPALHGSLDADELMVNRPGTRL-KNLFLRDNEGKRHF 59
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V D ++D+K L+++ GL + G A E + + LKV G V+ +L+N+ RDV L
Sbjct: 60 LVITAHDKQLDLKSLAKQQGLSRLGF--ASNERLAKYLKVAPGCVSMLSLMNDKQRDVTL 117
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ + HP N + L DL +F P
Sbjct: 118 WLDQDIWFGDLFHCHPFENTQTWLLTKPDLLRFFDFTEHQP 158
>gi|257885497|ref|ZP_05665150.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|430853714|ref|ZP_19471441.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1258]
gi|257821353|gb|EEV48483.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|430540267|gb|ELA80477.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1258]
Length = 161
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + Y+V + D+
Sbjct: 13 LKKLDISFQKVDHPAITSVK---NVPFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILAYLEHLPVYENL 161
>gi|336255893|ref|XP_003343317.1| hypothetical protein SMAC_11325 [Sordaria macrospora k-hell]
Length = 127
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++D+L A L I + EHP V TV+ A + +KNLFLKDK + +++
Sbjct: 2 TEDELFAELDRAGIVVEKLEHPPVFTVDESAAIHAALPAAHTKNLFLKDKYRKLWLIVLP 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+D + D+K ++ LG GK A E M +L V G+VTP A+ N + V+L+ D
Sbjct: 62 SDRRADLKAYAELLGAGKFSFGKA--EEMAAVLGVTPGAVTPLAIANTAPGAVSLVFDAA 119
Query: 124 FKAQERC 130
F+ ER
Sbjct: 120 FERSERI 126
>gi|425055525|ref|ZP_18458999.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 505]
gi|403033833|gb|EJY45318.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 505]
Length = 161
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLDISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKQIYLVILPDEKNADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDTAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|257899736|ref|ZP_05679389.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|293572973|ref|ZP_06683916.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E980]
gi|430840523|ref|ZP_19458447.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1007]
gi|431064358|ref|ZP_19493705.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1604]
gi|431123808|ref|ZP_19498521.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1613]
gi|431738476|ref|ZP_19527419.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1972]
gi|431741669|ref|ZP_19530572.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2039]
gi|257837648|gb|EEV62722.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|291606951|gb|EFF36330.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E980]
gi|430495010|gb|ELA71226.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1007]
gi|430567440|gb|ELB06524.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1613]
gi|430568999|gb|ELB08029.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1604]
gi|430597204|gb|ELB35007.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1972]
gi|430601401|gb|ELB39007.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2039]
Length = 161
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + Y+V + D+
Sbjct: 13 LKKLDISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKKIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|289423761|ref|ZP_06425556.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
gi|289155800|gb|EFD04470.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
Length = 165
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALAD 65
Q+ +L L I++S EH V T G KNLF ++ K ++Y++S +
Sbjct: 9 QIYDKLDSLGIDYSVIEHEPVYTAADLESIKDRAHGVHCKNLFFRNAKGDKYYLISCTDN 68
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+VD+K L +++G + L A E + ++L + GSV PF+L+N+ + V ++K
Sbjct: 69 AQVDVKGLKEKIGSTR--LSFASAERLEKVLNLLPGSVNPFSLINDREKVVNFFIEKKLV 126
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP N +++++ L+K+L +G
Sbjct: 127 GEDQLNFHPNVNHKTVTISYAGLEKYLSDLG 157
>gi|225574324|ref|ZP_03782934.1| hypothetical protein RUMHYD_02389 [Blautia hydrogenotrophica DSM
10507]
gi|225038475|gb|EEG48721.1| YbaK/proline--tRNA ligase associated domain protein [Blautia
hydrogenotrophica DSM 10507]
Length = 187
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L+ +I ++ +HPA M+VE +G + KNLFL ++ K FY++ D
Sbjct: 32 LEKYKIPYTGLDHPAAMSVEDCHNADVLLGIHICKNLFLCNRQKTDFYLLLMPGDKVFKT 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A + M ++L + GSVT L+ + + V LL+D+ +E
Sbjct: 92 KQLSAQIHTAR--LSFASPDYMQDLLNLTPGSVTIMGLMFDPEKKVKLLIDRDVLREEFF 149
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
FHP N S+ ++T DL +K + ++G +P YVDL
Sbjct: 150 GFHPCINTSSLKISTKDLTEKLIPALGHEPVYVDL 184
>gi|28210369|ref|NP_781313.1| DNA-binding protein [Clostridium tetani E88]
gi|28202806|gb|AAO35250.1| putative DNA-binding protein [Clostridium tetani E88]
Length = 175
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEA-------QAKYVGNIGGGLSKNLFLKDKKHR 56
SK +++ L +E+ H AV T++ +AK+V +KNLF++D K R
Sbjct: 17 SKQEIINLLNTSNLEYEVISHEAVFTIDEMLALNLPKAKFV-------AKNLFVRDDKKR 69
Query: 57 FYIVSALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARD 115
Y + + + K V++K + +R+ L A E + + L +P G+VTPF ++N+ +
Sbjct: 70 NYFLFVVREEKMVNLKQIRERIN--SCPLSFASESDLYQYLSLPKGAVTPFGVINDKTHN 127
Query: 116 VALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
V + +D FK HP N ++ L T DL +K G Y+D
Sbjct: 128 VKVYIDADFK-HSLIGVHPNENTATVWLKTKDLVDLIKQHGNQVEYIDF 175
>gi|261208256|ref|ZP_05922929.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289565942|ref|ZP_06446381.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
D344SRF]
gi|294616564|ref|ZP_06696341.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1636]
gi|294618842|ref|ZP_06698363.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1679]
gi|430850540|ref|ZP_19468300.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1185]
gi|430896031|ref|ZP_19484650.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1575]
gi|431682638|ref|ZP_19524601.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1904]
gi|431765737|ref|ZP_19554240.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4215]
gi|260077513|gb|EEW65231.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289162226|gb|EFD10087.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
D344SRF]
gi|291590574|gb|EFF22306.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1636]
gi|291594917|gb|EFF26273.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1679]
gi|430535408|gb|ELA75816.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1185]
gi|430555165|gb|ELA94719.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1575]
gi|430598544|gb|ELB36281.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1904]
gi|430627676|gb|ELB64159.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4215]
Length = 161
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVK---NVPFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KELAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKQIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIIDFSDFEKILAYLEHLPVYENL 161
>gi|320168369|gb|EFW45268.1| YbaK/prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 247
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKY------VGNIGGGLSKNLFLKDKKHRFYI 59
+QL AR I F + H A+ TVEA Y N G KNLF++DK+ Y+
Sbjct: 75 EQLSAR----GIAFMLHHHAALDTVEACKAYRDATDATANPHFGYCKNLFVRDKRGARYL 130
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV--- 116
+ A DT V M + L + P E +LE L V G V+P AL+ + R
Sbjct: 131 IVAHEDTTVHMPHARRVLNAARSFSMTTPAE-LLESLGVLPGCVSPLALLTDFVRPAGER 189
Query: 117 ---ALLLDKGFKAQE--RCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+LLD+ A++ FFHPL N SI L+ L FL+ +G
Sbjct: 190 TVSGVLLDRSLFAEKYSHLFFHPLVNTASIGLSPASLLSFLQELG 234
>gi|291562413|emb|CBL41229.1| Uncharacterized conserved protein [butyrate-producing bacterium
SS3/4]
Length = 188
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + +++H A T++A +G + KNLFL + +K +FY++ K
Sbjct: 32 LDSLNIPYIRFDHEAAFTIDACNGADEVLGIHICKNLFLCNAQKTKFYLLLMPGHKKFKT 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
KVLS+++G + L A ++ M E L + GSV+ L+N+ V LL+D E
Sbjct: 92 KVLSKQIGSAR--LSFADDDHMKEYLGLTPGSVSIMGLMNDPENHVKLLIDSDVLKDEYF 149
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ T+D ++KFL ++ +P VDL
Sbjct: 150 GCHPCINTTSMKFKTSDIMEKFLPAVHHEPTIVDL 184
>gi|256843613|ref|ZP_05549101.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus 125-2-CHN]
gi|293380721|ref|ZP_06626769.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Lactobacillus crispatus 214-1]
gi|312984344|ref|ZP_07791686.1| putative YbaK/prolyl-tRNA synthetase associated domain protein
[Lactobacillus crispatus CTV-05]
gi|256615033|gb|EEU20234.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus 125-2-CHN]
gi|290922685|gb|EFD99639.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Lactobacillus crispatus 214-1]
gi|310894269|gb|EFQ43349.1| putative YbaK/prolyl-tRNA synthetase associated domain protein
[Lactobacillus crispatus CTV-05]
Length = 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
++L L D I + + HPAV T + KY+ N K LF+K + + +Y++ +
Sbjct: 5 EILQLLDDHDISYQVFSHPAVYTTKEADKYLKNEDFTKCKTLFIKSRNGKNYYLLMLPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK-GF 124
KVD K + L L A E+ + E LKV G+V+PF L+N+S+ + L++D+
Sbjct: 65 KKVDWK--KAQSELLSPSLTFASEDELEEKLKVKSGTVSPFNLLNDSSNTIPLIVDQAAM 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ HP N +ISL DL + L S G
Sbjct: 123 EENNYVGVHPNDNTKTISLTWTDLARILSSYGH 155
>gi|160938245|ref|ZP_02085600.1| hypothetical protein CLOBOL_03141 [Clostridium bolteae ATCC
BAA-613]
gi|158438618|gb|EDP16375.1| hypothetical protein CLOBOL_03141 [Clostridium bolteae ATCC
BAA-613]
Length = 198
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L LQ+ F + +H A+ T+EA + +G + KNLFL++ +K FY++ + K
Sbjct: 42 LDSLQVPFVRVDHDALPTIEACREVDQLLGTEICKNLFLRNAQKTDFYLLLMPGNKKFKT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
VLS+++G + L E M L + GSV+ L+N+ + V LL+DK E
Sbjct: 102 AVLSKQIGSAR--LSFGEAEFMESFLDIKPGSVSVMGLMNDREKRVRLLIDKDILEGEYF 159
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ T DL DK L ++G VDL
Sbjct: 160 ACHPCINTSSLKFTTRDLMDKILPALGHPHTVVDL 194
>gi|227877760|ref|ZP_03995794.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus JV-V01]
gi|256850089|ref|ZP_05555519.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus MV-1A-US]
gi|262047377|ref|ZP_06020334.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus crispatus MV-3A-US]
gi|227862663|gb|EEJ70148.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus JV-V01]
gi|256713061|gb|EEU28052.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
crispatus MV-1A-US]
gi|260572351|gb|EEX28914.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus crispatus MV-3A-US]
Length = 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
++L L D I + + HPAV T + KY+ N K LF+K + + +Y++ +
Sbjct: 5 EILQLLDDHDISYQVFSHPAVYTTKEADKYLKNEDFTKCKTLFIKSRNGKNYYLLILPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK-GF 124
KVD K + L L A E+ + E LKV G+V+PF L+N+S+ + L++D+
Sbjct: 65 KKVDWK--KAQSELLSPSLTFASEDELEEKLKVKSGTVSPFNLLNDSSNTIPLIVDQAAM 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGR 157
+ HP N +ISL DL + L S G
Sbjct: 123 EENNYVGVHPNDNTKTISLTWTDLARILSSYGH 155
>gi|416129412|ref|ZP_11597309.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E4452]
gi|364094390|gb|EHM36571.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E4452]
Length = 161
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVK---NVPFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|431260029|ref|ZP_19505535.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1623]
gi|430576768|gb|ELB15393.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1623]
Length = 161
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKQIYLVILPDEKYADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|227552462|ref|ZP_03982511.1| YbaK/prolyl-tRNA synthetase [Enterococcus faecium TX1330]
gi|257888299|ref|ZP_05667952.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257896811|ref|ZP_05676464.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|293378560|ref|ZP_06624723.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium PC4.1]
gi|424765426|ref|ZP_18192825.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium TX1337RF]
gi|431040142|ref|ZP_19492649.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1590]
gi|431751089|ref|ZP_19539782.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2620]
gi|431758114|ref|ZP_19546742.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3083]
gi|431763575|ref|ZP_19552124.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3548]
gi|227178408|gb|EEI59380.1| YbaK/prolyl-tRNA synthetase [Enterococcus faecium TX1330]
gi|257824353|gb|EEV51285.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257833376|gb|EEV59797.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|292642889|gb|EFF61036.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium PC4.1]
gi|402417040|gb|EJV49347.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium TX1337RF]
gi|430561994|gb|ELB01247.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1590]
gi|430615906|gb|ELB52838.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2620]
gi|430617777|gb|ELB54641.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3083]
gi|430621948|gb|ELB58689.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3548]
Length = 161
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L+ L I F + +HPA+ +V+ ++ G KNL LK +K + Y+V + D+
Sbjct: 13 LRKLGISFQKVDHPAITSVK---NIPFSLPGPQVKNLLLKSRKGKKIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L +P G+VTP AL++++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGIPAGTVTPLALMHDTEKKIQVVIDSAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|69248234|ref|ZP_00604684.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
DO]
gi|257880068|ref|ZP_05659721.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257882303|ref|ZP_05661956.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257891159|ref|ZP_05670812.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257893973|ref|ZP_05673626.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|260560319|ref|ZP_05832495.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|293563072|ref|ZP_06677538.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1162]
gi|293567499|ref|ZP_06678844.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1071]
gi|294623624|ref|ZP_06702462.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
U0317]
gi|314940260|ref|ZP_07847433.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a04]
gi|314941682|ref|ZP_07848561.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133C]
gi|314947674|ref|ZP_07851083.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0082]
gi|314950661|ref|ZP_07853741.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133A]
gi|314992472|ref|ZP_07857893.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133B]
gi|314996866|ref|ZP_07861871.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a01]
gi|383329608|ref|YP_005355492.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium Aus0004]
gi|389869463|ref|YP_006376886.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Enterococcus faecium DO]
gi|406579728|ref|ZP_11054956.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD4E]
gi|406582054|ref|ZP_11057187.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD3E]
gi|406584134|ref|ZP_11059170.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD2E]
gi|406590222|ref|ZP_11064609.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD1E]
gi|410936159|ref|ZP_11368028.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Enterococcus sp. GMD5E]
gi|415891403|ref|ZP_11549705.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E4453]
gi|424792610|ref|ZP_18218823.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium V689]
gi|424797767|ref|ZP_18223319.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium S447]
gi|424826286|ref|ZP_18251196.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R501]
gi|424857877|ref|ZP_18281961.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R499]
gi|424868556|ref|ZP_18292298.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R497]
gi|424950913|ref|ZP_18366054.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R496]
gi|424955301|ref|ZP_18370143.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R494]
gi|424958819|ref|ZP_18373444.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R446]
gi|424961269|ref|ZP_18375724.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1986]
gi|424964872|ref|ZP_18378934.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1190]
gi|424967219|ref|ZP_18380927.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1140]
gi|424971647|ref|ZP_18385074.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1139]
gi|424973745|ref|ZP_18387010.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1137]
gi|424977239|ref|ZP_18390271.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1123]
gi|424981360|ref|ZP_18394096.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV99]
gi|424984776|ref|ZP_18397294.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV69]
gi|424989520|ref|ZP_18401784.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV38]
gi|424991162|ref|ZP_18403330.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV26]
gi|424994663|ref|ZP_18406594.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV168]
gi|424999321|ref|ZP_18410948.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV165]
gi|425000589|ref|ZP_18412145.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV161]
gi|425005062|ref|ZP_18416340.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV102]
gi|425008641|ref|ZP_18419711.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV1]
gi|425011925|ref|ZP_18422782.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E422]
gi|425013482|ref|ZP_18424212.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E417]
gi|425017024|ref|ZP_18427560.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C621]
gi|425020681|ref|ZP_18430976.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C497]
gi|425023771|ref|ZP_18433872.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C1904]
gi|425032886|ref|ZP_18437895.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 515]
gi|425035052|ref|ZP_18439904.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 514]
gi|425038936|ref|ZP_18443514.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 513]
gi|425042362|ref|ZP_18446702.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 511]
gi|425045826|ref|ZP_18449895.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 510]
gi|425049022|ref|ZP_18452898.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 509]
gi|425053296|ref|ZP_18456849.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 506]
gi|425059780|ref|ZP_18463099.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 503]
gi|427395607|ref|ZP_18888529.1| hypothetical protein HMPREF9307_00705 [Enterococcus durans
FB129-CNAB-4]
gi|430832250|ref|ZP_19450297.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0333]
gi|430847334|ref|ZP_19465173.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1133]
gi|430856555|ref|ZP_19474241.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1392]
gi|430860763|ref|ZP_19478358.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1573]
gi|431012246|ref|ZP_19490037.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1578]
gi|431309275|ref|ZP_19508656.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1626]
gi|431381559|ref|ZP_19511161.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1627]
gi|431517062|ref|ZP_19516452.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1634]
gi|431549982|ref|ZP_19519295.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1731]
gi|431745277|ref|ZP_19534126.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2134]
gi|431749682|ref|ZP_19538419.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2297]
gi|431755616|ref|ZP_19544265.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2883]
gi|431768223|ref|ZP_19556663.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1321]
gi|431771408|ref|ZP_19559792.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1644]
gi|431774205|ref|ZP_19562517.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2369]
gi|431777328|ref|ZP_19565582.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2560]
gi|431779986|ref|ZP_19568175.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4389]
gi|431783065|ref|ZP_19571189.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6012]
gi|431786526|ref|ZP_19574538.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6045]
gi|447913552|ref|YP_007394964.1| YbaK, prolyl-tRNA synthetase associated region [Enterococcus
faecium NRRL B-2354]
gi|68194485|gb|EAN08983.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
DO]
gi|257814296|gb|EEV43054.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257817961|gb|EEV45289.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257827519|gb|EEV54145.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257830352|gb|EEV56959.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|260073664|gb|EEW61990.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|291589742|gb|EFF21545.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1071]
gi|291596950|gb|EFF28163.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
U0317]
gi|291604986|gb|EFF34454.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E1162]
gi|313589009|gb|EFR67854.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a01]
gi|313592932|gb|EFR71777.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133B]
gi|313597208|gb|EFR76053.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133A]
gi|313599454|gb|EFR78297.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133C]
gi|313640580|gb|EFS05160.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a04]
gi|313645915|gb|EFS10495.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0082]
gi|364094032|gb|EHM36249.1| YbaK/prolyl-tRNA synthetase domain protein [Enterococcus faecium
E4453]
gi|378939302|gb|AFC64374.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium Aus0004]
gi|388534712|gb|AFK59904.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
DO]
gi|402917470|gb|EJX38257.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium V689]
gi|402920316|gb|EJX40840.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium S447]
gi|402924444|gb|EJX44653.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R501]
gi|402927873|gb|EJX47797.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R499]
gi|402932145|gb|EJX51678.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R496]
gi|402934368|gb|EJX53724.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R494]
gi|402936952|gb|EJX56097.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R497]
gi|402938969|gb|EJX57931.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R446]
gi|402944259|gb|EJX62686.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1986]
gi|402945459|gb|EJX63805.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1190]
gi|402954883|gb|EJX72465.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1140]
gi|402958001|gb|EJX75355.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1137]
gi|402958598|gb|EJX75905.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1139]
gi|402963953|gb|EJX80790.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV99]
gi|402966650|gb|EJX83266.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1123]
gi|402967909|gb|EJX84422.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV69]
gi|402968634|gb|EJX85106.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV38]
gi|402977513|gb|EJX93324.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV26]
gi|402979260|gb|EJX94936.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV165]
gi|402979466|gb|EJX95132.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV168]
gi|402987706|gb|EJY02751.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV102]
gi|402988896|gb|EJY03867.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV161]
gi|402991929|gb|EJY06666.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV1]
gi|402995217|gb|EJY09694.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E422]
gi|403000895|gb|EJY14979.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E417]
gi|403005664|gb|EJY19354.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C621]
gi|403008788|gb|EJY22279.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C497]
gi|403008876|gb|EJY22362.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C1904]
gi|403011714|gb|EJY25005.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 515]
gi|403018018|gb|EJY30731.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 513]
gi|403018848|gb|EJY31501.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 514]
gi|403023624|gb|EJY35862.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 511]
gi|403026265|gb|EJY38266.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 510]
gi|403029155|gb|EJY40925.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 509]
gi|403030907|gb|EJY42560.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 506]
gi|403043250|gb|EJY54171.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 503]
gi|404455059|gb|EKA01928.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD4E]
gi|404458716|gb|EKA05124.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD3E]
gi|404464527|gb|EKA10055.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD2E]
gi|404469601|gb|EKA14366.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD1E]
gi|410735400|gb|EKQ77312.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Enterococcus sp. GMD5E]
gi|425723596|gb|EKU86483.1| hypothetical protein HMPREF9307_00705 [Enterococcus durans
FB129-CNAB-4]
gi|430480241|gb|ELA57429.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0333]
gi|430537277|gb|ELA77621.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1133]
gi|430544315|gb|ELA84353.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1392]
gi|430551081|gb|ELA90850.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1573]
gi|430559757|gb|ELA99081.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1578]
gi|430579204|gb|ELB17727.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1626]
gi|430581921|gb|ELB20359.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1627]
gi|430585616|gb|ELB23895.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1634]
gi|430590670|gb|ELB28724.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1731]
gi|430610713|gb|ELB47844.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2134]
gi|430611269|gb|ELB48371.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2297]
gi|430616838|gb|ELB53733.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2883]
gi|430629607|gb|ELB66003.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1321]
gi|430633472|gb|ELB69638.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1644]
gi|430634607|gb|ELB70725.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2369]
gi|430639440|gb|ELB75313.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2560]
gi|430641067|gb|ELB76887.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4389]
gi|430645419|gb|ELB80934.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6045]
gi|430646087|gb|ELB81582.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6012]
gi|445189261|gb|AGE30903.1| YbaK, prolyl-tRNA synthetase associated region [Enterococcus
faecium NRRL B-2354]
Length = 161
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVK---NVPFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|430845045|ref|ZP_19462941.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1050]
gi|431238561|ref|ZP_19503430.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1622]
gi|430495879|gb|ELA71999.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1050]
gi|430572262|gb|ELB11124.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1622]
Length = 161
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|359443346|ref|ZP_09233188.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20429]
gi|358034758|dbj|GAA69437.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20429]
Length = 166
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L DL I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MFADKTKLAELLADLDITYDAIEHPPLHTSLAADEFMIERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHNKQLDLKALSKQQGLSRLGF--ASSERLATYLKVAPGCVSMLALLNDKQNEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWGGGLFHCHPFENTQTWLLSKADLETFFNHTKHQPRVVFL 163
>gi|308050673|ref|YP_003914239.1| Ala-tRNA(Pro) hydrolase [Ferrimonas balearica DSM 9799]
gi|307632863|gb|ADN77165.1| Ala-tRNA(Pro) hydrolase [Ferrimonas balearica DSM 9799]
Length = 165
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK--KHRFYIVSALADTKVD 69
L L I++ YEHP + + + G +KNLFL+D K F +V+A D +VD
Sbjct: 7 LASLNIDYHAYEHPPLHDCSEADRLALDRDGQRTKNLFLRDNYGKRHFVLVTA-PDKQVD 65
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
+K LS+++ L + G A E + L + G V+ ALVN+ + V L +D+ E
Sbjct: 66 LKALSRQMKLSRLGF--ASAERLERYLGIQPGRVSLLALVNDPEQAVTLWIDEAIWQGEG 123
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGR 157
HP+ N + L +D+ L GR
Sbjct: 124 LHCHPMDNTKTWVLKPDDIKTLLAHWGR 151
>gi|210621360|ref|ZP_03292596.1| hypothetical protein CLOHIR_00539 [Clostridium hiranonis DSM 13275]
gi|210154784|gb|EEA85790.1| hypothetical protein CLOHIR_00539 [Clostridium hiranonis DSM 13275]
Length = 171
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L +L +++ EH + T E K G +KNLFL++ K +++Y++ A V++
Sbjct: 20 LDELGVDYGVVEHEPLYTAEDLNKIKEQAPGLHAKNLFLRNAKGNKYYLIVAEDSKPVNL 79
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + + +G L A E+ ++++LK+ GSV PF+LVN+ + V L ++K + E
Sbjct: 80 KEVKKLIG--STNLSFASEDRLMKVLKLVPGSVNPFSLVNDEEKVVELYIEKELLSGELL 137
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIG 156
FHP N +++++ + L K+L IG
Sbjct: 138 NFHPNVNYKTVTISLDGLKKYLDHIG 163
>gi|395794311|ref|ZP_10473638.1| hypothetical protein A462_03714 [Pseudomonas sp. Ag1]
gi|395341508|gb|EJF73322.1| hypothetical protein A462_03714 [Pseudomonas sp. Ag1]
Length = 169
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M KD +L L I + EH AV T E K I G KN+FL D K +
Sbjct: 1 MLQPKD-VLHLLDTCSIAYEYVEHSAVRTCEEADKLDIGISGQAVKNIFLCDAKGLNPTL 59
Query: 61 SAL-ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L ++ ++D++ LSQ LGL GLR A ++E L V G+V+ L N+ R ++
Sbjct: 60 VVLKSEQRLDLRALSQTLGLK--GLRFASPRRLMETLGVEPGAVSLLGLCNDVQRATQVV 117
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+ + +R HPL N ++S+ D+ + L+ +G P L AN A
Sbjct: 118 IAEEVWNGDRILCHPLVNTATLSIAVRDMARLLEHLGFTPI---LAANSA 164
>gi|227513903|ref|ZP_03943952.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
fermentum ATCC 14931]
gi|227087710|gb|EEI23022.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
fermentum ATCC 14931]
Length = 168
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYI 59
M ++ ++ L + I++ HPAV + A A + +KNLF++D KHR +Y+
Sbjct: 1 MLMNQAEVYQYLTEHGIDYEVTNHPAVFDMAAVADFPMPHPEANAKNLFVRDDKHRHYYL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V+ + +VD+K LS + G + L A E+ + + L + GSVTP ++N+ R V ++
Sbjct: 61 VTVKGEKRVDLKALSAQEGTRR--LSFASEQDLQKYLDLTPGSVTPLGVLNDEQRKVEVM 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D+ A HP N ++ L T+DL + L G
Sbjct: 119 IDQELAAG-LVAAHPNVNTATVWLKTSDLVQLLADHG 154
>gi|395495027|ref|ZP_10426606.1| hypothetical protein PPAM2_03133 [Pseudomonas sp. PAMC 25886]
Length = 163
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL-ADT 66
+L L I + EH AV T E K I G KN+FL D K + L +D
Sbjct: 7 VLHLLDTCSITYQYVEHSAVRTCEEADKLDIGISGQAVKNIFLCDAKGLNPTLVVLKSDQ 66
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
++D++ LSQ LGL GLR A ++E L V G+V+ L N+ R +++ +
Sbjct: 67 RLDLRALSQTLGLK--GLRFASPRRLMETLGVEPGAVSLLGLCNDVQRATQVVIAEEVWN 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
+R HPL N ++S+ D+ + L +G P
Sbjct: 125 GDRILCHPLVNTATLSIAVRDMARLLDHLGFTP 157
>gi|152987305|ref|YP_001348811.1| hypothetical protein PSPA7_3451 [Pseudomonas aeruginosa PA7]
gi|452878877|ref|ZP_21956040.1| hypothetical protein G039_20173 [Pseudomonas aeruginosa VRFPA01]
gi|150962463|gb|ABR84488.1| hypothetical protein PSPA7_3451 [Pseudomonas aeruginosa PA7]
gi|452184500|gb|EME11518.1| hypothetical protein G039_20173 [Pseudomonas aeruginosa VRFPA01]
Length = 161
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 17 IEFSQYEHPAVMTVE---AQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKV 72
I+ + EHPA+ ++E AQ + + G KNLFL+++K R Y+V + D+
Sbjct: 15 IDSQRVEHPAIASIEEYYAQGIELPDQG---IKNLFLRNRKGTRHYLVLLDERKEADLPG 71
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+++++ + L A E + E L V LG VTPFALVN+ V +LLD + + F
Sbjct: 72 IAEQID--ESRLSFASVERLREYLGVELGCVTPFALVNDPQHRVEVLLDDAIRQDQLLGF 129
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HPL N + + DL FL G +P +
Sbjct: 130 HPLVNTATECIRYADLLAFLAHTGHEPRLI 159
>gi|184155929|ref|YP_001844269.1| hypothetical protein LAF_1453 [Lactobacillus fermentum IFO 3956]
gi|183227273|dbj|BAG27789.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 168
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYI 59
M ++ ++ L + I++ HPAV + A A + +KNLF++D KHR +Y+
Sbjct: 1 MLMNQAEVYQYLTEHGIDYEVTNHPAVFDMAAVADFPMPHPEANAKNLFVRDDKHRHYYL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V+ + +VD+K LS + G + L A E+ + + L + GSVTP ++N+ R V ++
Sbjct: 61 VTVKGEKRVDLKALSAQEGTRR--LSFASEQDLQKYLDLTPGSVTPLGVLNDEQRKVEVM 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D+ A HP N ++ L T+DL + L G
Sbjct: 119 IDQELAAG-LVAAHPNVNTATVWLKTSDLVQLLADHG 154
>gi|430826723|ref|ZP_19444897.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0164]
gi|430444748|gb|ELA54566.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0164]
Length = 161
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+ + + + +++D Q+
Sbjct: 70 KELAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMYDKEKQIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIIDFSDFEKILAYLEHLPVYENL 161
>gi|430823869|ref|ZP_19442438.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0120]
gi|430866950|ref|ZP_19482176.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1574]
gi|431744630|ref|ZP_19533498.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2071]
gi|430441902|gb|ELA51973.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0120]
gi|430551000|gb|ELA90770.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1574]
gi|430605373|gb|ELB42778.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2071]
Length = 161
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLDISFQKVDHPAITSVK---NVPFSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L +P G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGIPAGTVTPLALMHDKEKQIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIIDFFDFEKILAYLEHLPVYENL 161
>gi|430961988|ref|ZP_19487271.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1576]
gi|430555898|gb|ELA95426.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1576]
Length = 161
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
LK L I F + +HPA+ +V+ ++ G KNL LK +K + + L D K D+
Sbjct: 13 LKKLGISFQKVDHPAITSVKNVP---FSLPGPQVKNLLLKSRKGKQIYLVILPDEKHADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 70 KQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKDKKIQVVIDAAIDRQDTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 128 GFHPNINTTTLIMDFSDFEKILVYLEHLPVYENL 161
>gi|227545133|ref|ZP_03975182.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri CF48-3A]
gi|338203916|ref|YP_004650061.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri SD2112]
gi|227184865|gb|EEI64936.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri CF48-3A]
gi|336449156|gb|AEI57771.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri SD2112]
Length = 162
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L D +I + HP V T E KYV +KNLFLK+K +Y+V+ L + +++MK
Sbjct: 12 LDDEKINYQIIMHPPVYTAEQADKYVQEYQFARTKNLFLKNKA-GYYLVTILENKRLNMK 70
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQERC 130
L + L + PEE ++ L + G+V+PF L N+ V ++D FK +E
Sbjct: 71 KLKENLSTSRFSF-AHPEELAMK-LGITSGAVSPFNLFNDKQHQVTFIIDADIFKNEELI 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP N ++ L T DL + +K G V L
Sbjct: 129 GCHPNINTATVILRTKDLLQIIKLNGNSVKAVQL 162
>gi|406885499|gb|EKD32675.1| hypothetical protein ACD_77C00005G0002, partial [uncultured
bacterium]
Length = 161
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L+DL I ++ + HP + T+E KY ++ G KNLF ++ K + Y+V ++++
Sbjct: 26 LEDLNIPYTLFRHPELSTIEDVLKYWTDLPGEHCKNLFFRNHKGNLHYLVLIRCTKQLNI 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L Q L GK L A + + L + GSV+PF L+N++ V L +D + +
Sbjct: 86 HNLEQNLKQGK--LTFASNDRLFRYLGLLPGSVSPFGLINDTEHHVKLFIDTDLQNSSQI 143
Query: 131 FFHPLSNDMSISLNTNDL 148
FHP N SI + D
Sbjct: 144 CFHPNDNTASIMIKWPDF 161
>gi|359438519|ref|ZP_09228537.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20311]
gi|359445828|ref|ZP_09235542.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20439]
gi|358026795|dbj|GAA64786.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20311]
gi|358040231|dbj|GAA71791.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20439]
Length = 166
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKK-HRFY 58
M K +L A L L I + EHPA+ +++A V G L KNLFL+D + R +
Sbjct: 1 MLADKQKLAAVLAQLDINYDVIEHPALHGSLDADELMVNRPGTRL-KNLFLRDNEGKRHF 59
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V D ++D+K LS++ GL + G A E + + LKV G V+ +L+N+ RDV L
Sbjct: 60 LVITAHDKQLDLKSLSKQQGLSRLGF--ASNERLAKYLKVAPGCVSMLSLMNDKQRDVTL 117
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ + HP N + L DL +F P
Sbjct: 118 WLDQDIWFGDLFHCHPFINTQTWLLTKPDLLRFFDFTEHQP 158
>gi|429728318|ref|ZP_19263048.1| YbaK/proline--tRNA ligase associated domain protein
[Peptostreptococcus anaerobius VPI 4330]
gi|429150191|gb|EKX93137.1| YbaK/proline--tRNA ligase associated domain protein
[Peptostreptococcus anaerobius VPI 4330]
Length = 196
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALAD 65
Q+ +L L I++S EH V T G KNLF ++ K ++Y++S +
Sbjct: 40 QIYDKLDSLGIDYSVIEHEPVYTAADLESIKDRAHGVHCKNLFFRNAKGDKYYLISCTDN 99
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+VD+K L +++G + L A E + ++L + GSV PF+L+N+ + V ++K
Sbjct: 100 AQVDVKGLKEKIGSTR--LSFASAERLEKVLNLLPGSVNPFSLINDREKVVNFFIEKKLV 157
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+++ FHP N +++++ L+K+L +G
Sbjct: 158 GEDQLNFHPNVNHKTVTISYAGLEKYLSDLG 188
>gi|160931862|ref|ZP_02079255.1| hypothetical protein CLOLEP_00693 [Clostridium leptum DSM 753]
gi|156869199|gb|EDO62571.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
leptum DSM 753]
Length = 163
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDM 70
L L I++ EHP V T++ G + KNLFL+D K R ++V D + D+
Sbjct: 12 LDSLDIDYEITEHPPVYTIDEMKNLGITHKGDVVKNLFLRDAKGKRHFLVVLDKDKRADL 71
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L ++L K L A EE + + L + GSVTP ++N++ V L+ D+ + R
Sbjct: 72 KALQEQLSCSK--LSFASEERLKKHLGLFRGSVTPLGILNDAQGMVELVFDRDLIGRRRL 129
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP N +I ++ ++L K ++ YV L
Sbjct: 130 GVHPNENTATIWISFDNLKKISQAFHHPIQYVSL 163
>gi|99082441|ref|YP_614595.1| Ala-tRNA(Pro) hydrolase [Ruegeria sp. TM1040]
gi|99038721|gb|ABF65333.1| Ala-tRNA(Pro) hydrolase [Ruegeria sp. TM1040]
Length = 176
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNI-----GGGLSKNLFLKDKKHRFY 58
S + LL++L I + +EH + TVE G + KNL+L+D+K R Y
Sbjct: 15 SCEDLLSQLNSWGISYVLHEHAPLRTVEDAKAVEGALLRPGEQALRLKNLYLRDRKKRNY 74
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+VS D VD+K L LG G A + ++E L V G+VTP A++N + + V
Sbjct: 75 LVSLEQDRDVDLKALGATLGGGGLSFGSA--DRLMEFLGVRPGAVTPLAMINGAPKGVRF 132
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+D + + + HPL N ++++ DL F + IG P ++
Sbjct: 133 FMDAQAQHADSIYMHPLVNTRTLAMPRADLMVFFERIGVTPEWI 176
>gi|405982707|ref|ZP_11041018.1| hypothetical protein HMPREF9451_00093 [Slackia piriformis YIT
12062]
gi|404389416|gb|EJZ84492.1| hypothetical protein HMPREF9451_00093 [Slackia piriformis YIT
12062]
Length = 172
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
K++++A L D EF EH AV T+E G + KNLFL+D K R +Y+V
Sbjct: 6 GKEEVIAFLHDGGCEFEIVEHEAVFTMEGMEALNLPFGEEVVKNLFLRDDKKRNYYLVVM 65
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D ++K L R L LR A E+ + + L + G+V+PF ++N+ V ++ D+
Sbjct: 66 PEDKPANLKEL--RTKLEARPLRFASEDDLAQYLGLRGGAVSPFGVLNDEDAAVQVVFDE 123
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP N ++ + +D+ + ++S G +V+L
Sbjct: 124 ELRGYRGLGVHPNDNTATLHVALDDMVRIIESHGNSMRFVEL 165
>gi|282855557|ref|ZP_06264873.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282586592|gb|EFB91844.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 160
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSA 62
+K +++A L I + + EH V T++ ++KNLF+ D KK R+Y+++
Sbjct: 2 NKREVMAMLDAEGIAYEKAEHEPVYTIDEMLALGLPHVEAIAKNLFVHDDKKQRYYLITV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ +VD+K R G + L EE + IL + GSVTPF ++N+ R V + D
Sbjct: 62 KEEKRVDLKDFKARFGTRR--LSFVSEEELNRILGLARGSVTPFGILNDEERQVTVYFDD 119
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
F+ + HP N ++ + T D+ + + + G
Sbjct: 120 DFRGR-LMGIHPNENTATVYVKTEDVARLITAHG 152
>gi|300855163|ref|YP_003780147.1| hypothetical protein CLJU_c19830 [Clostridium ljungdahlii DSM
13528]
gi|300435278|gb|ADK15045.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 185
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L+ L I +S+ +H ++E +G + KNLFL +K +FY++ D K
Sbjct: 30 LEKLDIPYSRIDHDVTASIEDCYDVERLLGITICKNLFLCNSQKTQFYLLMMPGDKKFKT 89
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L AP E M + L + GSV+ L+N++ +V LL+D+ +E
Sbjct: 90 KELSNQIQSSR--LSFAPAEYMEKYLDITPGSVSVMGLMNDAEHNVKLLIDEDVIREEYV 147
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T +DKFL G P YV L
Sbjct: 148 GCHPCINTSSLKIETKYIIDKFLPYTGHVPTYVKL 182
>gi|321477103|gb|EFX88062.1| hypothetical protein DAPPUDRAFT_92028 [Daphnia pulex]
Length = 138
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 35 KYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETML 93
+++ ++ G +KNL +KDKK + Y+++A D V + +S+ +G + LR A ET+
Sbjct: 2 EHISHLVGFHAKNLLVKDKKTSKLYLITARHDATVQLGQISKVIGAKE--LRFADAETLE 59
Query: 94 EILKVPLGSVTPFALVNESARD-VALLLD------KGFKAQERCF-FHPLSNDMSISLNT 145
L V GSVTPFAL+N++ V +LD K Q+ FHP++N+ + S+
Sbjct: 60 ASLGVQQGSVTPFALLNDAQEHRVTFVLDGQLWSEKNSDGQDSYLNFHPMTNEATTSITV 119
Query: 146 NDLDKFLKSIGRDPAYVDL 164
FLK+ G +P + L
Sbjct: 120 AGFKVFLKATGHEPVIIQL 138
>gi|255527944|ref|ZP_05394786.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255508371|gb|EET84769.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 185
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L + I +S+ +H ++E +G + KNLFL +K FY++ D K
Sbjct: 30 LDKIHIPYSRIDHDVTASIEDCYDVEKLLGITICKNLFLCNSQKTEFYLLMMPGDKKFRT 89
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++ + L AP E M L + GSV+ L+N+ + V LL+D+ ++
Sbjct: 90 KELSKQIQSSR--LSFAPAEYMERYLDITPGSVSVMGLMNDKEQKVKLLIDEDIIKEDYL 147
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T D +DKFL G P YV L
Sbjct: 148 GCHPCINTSSLKIKTKDIIDKFLSYTGHIPKYVQL 182
>gi|359431891|ref|ZP_09222297.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20652]
gi|357921413|dbj|GAA58546.1| prolyl-tRNA editing protein proX [Pseudoalteromonas sp. BSi20652]
Length = 166
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L L I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MLADKTKLAELLAHLDINYDVIEHPPLHTSLAADEFMVERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V D ++D+K LS++ GL + G A + + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHDKQLDLKSLSKQQGLSRLGF--ASSKRLATFLKVAPGCVSMLALLNDRQSEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWGGDLFHCHPFENTQTWLLSKADLNTFFNHTKHQPRVVFL 163
>gi|239626810|ref|ZP_04669841.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516956|gb|EEQ56822.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L + +++ +H A+ T+EA K +G + KNLFL++ +K FY++ + K
Sbjct: 42 LDSLGVPYTRVDHDALPTIEACLKVDQLLGAEICKNLFLRNAQKTDFYLLLMPGNKKFKT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
VLS+++G + L + M + + + GSVT L+N+ V LL+DK E
Sbjct: 102 AVLSKQIGSAR--LSFGEPDFMEQFMDLTPGSVTVLGLMNDKENRVRLLIDKDVLDSEFF 159
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N SI L T DL DK L ++G VDL
Sbjct: 160 GCHPCMNTSSILLRTRDLIDKILPAMGHPYTVVDL 194
>gi|254510168|ref|ZP_05122235.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacteraceae
bacterium KLH11]
gi|221533879|gb|EEE36867.1| YbaK/prolyl-tRNA synthetase domain protein [Rhodobacteraceae
bacterium KLH11]
Length = 176
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN---IGGGLS---KNLFLKDKKHRF 57
S D LLA+L + + + H + TVE AK V + + G + KNL+L+DKK R
Sbjct: 14 SSDALLAQLDAWGLRYRLHHHVPLRTVE-DAKAVEDQFLVPGENALRLKNLYLRDKKKRN 72
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
Y+V+ ++D+K L LG+G L + + E L + G+V+P A++N + V
Sbjct: 73 YLVTLEQSRQIDLKRLGAELGVGS--LSFGSADRLFEHLGIRPGAVSPLAMINGARAGVR 130
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D + + HPL ND ++++ DL F +G
Sbjct: 131 FCMDAAAQQADVINMHPLVNDRTVAMPRADLMAFFDWVG 169
>gi|392538089|ref|ZP_10285226.1| hypothetical protein Pmarm_08161 [Pseudoalteromonas marina mano4]
Length = 170
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK--KHRFY 58
M K +L A L L I + EHP + T A + + G KNLFL+D K F
Sbjct: 5 MLADKTKLEACLAHLNINYDVIEHPPLHTSLAADELLLERPGTRLKNLFLRDNEGKRHFL 64
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+++A + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ V +
Sbjct: 65 VITA-HNKQLDLKALSKQQGLSRLGF--ASSERLATYLKVAPGCVSMLALLNDKQNAVTV 121
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ E HP N ++ L+ +DL+ F P
Sbjct: 122 WLDQDIWFGELFHCHPFENTLTWILSKSDLETFFNYTSHQP 162
>gi|385813408|ref|YP_005849801.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus helveticus H10]
gi|323466127|gb|ADX69814.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
helveticus H10]
Length = 162
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSAL 63
+ +LL+ L + + + HPAV T + +Y+ + KNLF+K + K +++V
Sbjct: 3 RQELLSLLDKHDVTYQAFTHPAVSTSKEADQYLKDETFVKCKNLFIKTRDKKSYFLVMLP 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ K+D K + L L MA E+ ++E LKV G V+PF+L+N+ + L++D+
Sbjct: 63 ENKKIDWKKAQKELF--TSSLTMADEDELMEKLKVKRGLVSPFSLLNDETNTIPLVIDQ- 119
Query: 124 FKAQERCFF---HPLSNDMSISLNTNDLDKFLKSIGR 157
+A E F HP N +ISL DL + L S G
Sbjct: 120 -EAMEENNFVGVHPNDNTKTISLQWIDLARILSSYGH 155
>gi|260103138|ref|ZP_05753375.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|417009766|ref|ZP_11945902.1| hypothetical protein AAULH_09173 [Lactobacillus helveticus MTCC
5463]
gi|260083048|gb|EEW67168.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|328464787|gb|EGF36102.1| hypothetical protein AAULH_09173 [Lactobacillus helveticus MTCC
5463]
Length = 162
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALAD 65
+LL+ L + + + HPAV T + +Y+ + KNLF+K + K +++V +
Sbjct: 5 ELLSLLDKHDVTYQAFTHPAVSTSKEADQYLKDETFVKCKNLFIKTRDKKSYFLVMLPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K+D K + L L MA E+ ++E LKV G V+PF+L+N+ + L++D+ +
Sbjct: 65 KKIDWKKAQKELF--TSSLTMADEDELMEKLKVKRGLVSPFSLLNDETNTIPLVIDQ--E 120
Query: 126 AQERCFF---HPLSNDMSISLNTNDLDKFLKSIGR 157
A E F HP N +ISL DL + L S G
Sbjct: 121 AMEENNFVGVHPNDNTKTISLQWIDLARILSSYGH 155
>gi|377831570|ref|ZP_09814542.1| ybaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus mucosae LM1]
gi|377554633|gb|EHT16340.1| ybaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus mucosae LM1]
Length = 165
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADT 66
+LA+L + QI + HPAV ++ A +KNLFL+D KH+ +Y+VS +
Sbjct: 11 VLAKLDERQINYEMQRHPAVDRIDQIADLNLIHPETAAKNLFLRDDKHQHYYLVSIMPQK 70
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+VD+K R +G L A E M + L + GSVTP +N++ V + LD+ F+
Sbjct: 71 RVDLKAF--RKEIGARHLSFASAEDMEKYLALRPGSVTPMGALNDTEHQVQVYLDQDFQG 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAY 161
H +N ++ L+ + L FL G AY
Sbjct: 129 G-LIGVHANANTATVWLDADVLSAFLTEYGCRVAY 162
>gi|255655863|ref|ZP_05401272.1| putative regulatory protein [Clostridium difficile QCD-23m63]
gi|296450856|ref|ZP_06892606.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP08]
gi|296879141|ref|ZP_06903136.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP07]
gi|296260327|gb|EFH07172.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP08]
gi|296429684|gb|EFH15536.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
difficile NAP07]
Length = 163
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + ++ +L +L I + HP V T+E + + KNLFL+D K + + +
Sbjct: 1 MNNQQQEVYKKLDELNIPYEAVNHPPVYTIEEMEELKTLHMEFVVKNLFLRDAKGKEHFL 60
Query: 61 SALA-DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K D+K + Q++ L A EE + + LK+ G+VTPF ++N+ V ++
Sbjct: 61 VVLGKDKKADLKDIRQQID--SKPLSFASEERLQKYLKLTKGAVTPFGILNDKEAVVKVV 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK ++ HP N ++ L D+ K ++ G + YV++
Sbjct: 119 FDKDLLKMDKIGIHPNDNTATVFLKFEDMKKLIEENGNEIYYVEV 163
>gi|153852864|ref|ZP_01994301.1| hypothetical protein DORLON_00283 [Dorea longicatena DSM 13814]
gi|149754506|gb|EDM64437.1| YbaK/proline--tRNA ligase associated domain protein [Dorea
longicatena DSM 13814]
Length = 184
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + + +H AVMT+EA + +G + KNLFL + KK +Y++ + +
Sbjct: 25 LDSLHIPYIRADHEAVMTMEACEEIDKALGMEICKNLFLCNRKKTSYYLLLMPGNKALKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LSQ++ + L A E M L V GS T L+ + V LL+D+ QE
Sbjct: 85 KELSQQIPTTR--LSFASGEDMETYLNVTPGSATVMGLIFDPENKVQLLVDEELLEQEEF 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N SI + T D+ DKFLK I D V L
Sbjct: 143 GCHPCVNTSSIKMKTADVFDKFLKEIHHDYITVKL 177
>gi|392534799|ref|ZP_10281936.1| hypothetical protein ParcA3_12286 [Pseudoalteromonas arctica A
37-1-2]
Length = 166
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L L I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MLADKTKLAELLVRLDITYDAIEHPPLHTSLAADEFMIERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHNKQLDLKALSKQQGLSRLGF--ASSERLATYLKVAPGCVSMLALLNDKQNEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWGGDLFHCHPFENTQTWLLSKADLETFFNHTKHQPRVVFL 163
>gi|323342704|ref|ZP_08082936.1| YbaK/prolyl-tRNA synthetase associated region [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322463816|gb|EFY09010.1| YbaK/prolyl-tRNA synthetase associated region [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 166
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK--HRFYIVSALA 64
Q+ L +L IE+ + H + +VE + + + G K L +K KK H FY++ A
Sbjct: 8 QITDLLHELNIEYREDHHEPIFSVEVE---IPELPGPQIKYLLVKPKKTEHEFYLILAHD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ D+K L +LG + L E M E++ V GS+T +++ + ++ +++D+
Sbjct: 65 EKHPDLKDLQAQLGTKR--LTFPTSEEMSELIGVEFGSLTAASVIADKNHEITVIVDEAI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP N ++ ++ DL+++L +G P Y+ L
Sbjct: 123 NRDDTIGIHPNDNSITYTIAFKDLERYLDHLGYTPRYIPL 162
>gi|126699503|ref|YP_001088400.1| oligonucleotide binding regulator [Clostridium difficile 630]
gi|254975485|ref|ZP_05271957.1| putative regulatory protein [Clostridium difficile QCD-66c26]
gi|255092873|ref|ZP_05322351.1| putative regulatory protein [Clostridium difficile CIP 107932]
gi|255101020|ref|ZP_05329997.1| putative regulatory protein [Clostridium difficile QCD-63q42]
gi|255306884|ref|ZP_05351055.1| putative regulatory protein [Clostridium difficile ATCC 43255]
gi|255314614|ref|ZP_05356197.1| putative regulatory protein [Clostridium difficile QCD-76w55]
gi|255517288|ref|ZP_05384964.1| putative regulatory protein [Clostridium difficile QCD-97b34]
gi|255650395|ref|ZP_05397297.1| putative regulatory protein [Clostridium difficile QCD-37x79]
gi|260683508|ref|YP_003214793.1| regulatory protein [Clostridium difficile CD196]
gi|260687168|ref|YP_003218302.1| regulatory protein [Clostridium difficile R20291]
gi|306520374|ref|ZP_07406721.1| putative regulatory protein [Clostridium difficile QCD-32g58]
gi|384361126|ref|YP_006198978.1| regulatory protein [Clostridium difficile BI1]
gi|423082601|ref|ZP_17071190.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
gi|423087104|ref|ZP_17075494.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|423089308|ref|ZP_17077670.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 70-100-2010]
gi|115250940|emb|CAJ68768.1| putative oligonucleotide binding regulator [Clostridium difficile
630]
gi|260209671|emb|CBA63385.1| putative regulatory protein [Clostridium difficile CD196]
gi|260213185|emb|CBE04652.1| putative regulatory protein [Clostridium difficile R20291]
gi|357545353|gb|EHJ27328.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|357547719|gb|EHJ29594.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
gi|357558444|gb|EHJ39938.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 70-100-2010]
Length = 163
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + ++ +L +L I + HP V T+E + + KNLFL+D K + + +
Sbjct: 1 MNNQQQEVYKKLDELSIPYEAVNHPPVYTIEEMEELKTLHMEFVVKNLFLRDAKGKEHFL 60
Query: 61 SALA-DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
L D K D+K + Q++ L A EE + + LK+ G+VTPF ++N+ V ++
Sbjct: 61 VVLGKDKKADLKDIRQQID--SKPLSFASEERLQKYLKLTKGAVTPFGILNDKEAVVKVV 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
DK ++ HP N ++ L D+ K ++ G + YV++
Sbjct: 119 FDKDLLKMDKIGIHPNDNTATVFLKFEDMKKLIEENGNEIYYVEV 163
>gi|260662640|ref|ZP_05863534.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus fermentum 28-3-CHN]
gi|260552721|gb|EEX25720.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus fermentum 28-3-CHN]
Length = 155
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
LL +L DL I + +HPA T E Y+ GG +K +FLKDK RFY++ +
Sbjct: 10 LLKQLYDLNISYQMVDHPAADTTEEADAYISGKGGVATKTMFLKDKHKRFYVLVMDDNKC 69
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKA 126
+D K G + + MA + + L + G ++PF L V + D+
Sbjct: 70 LDFKEFQDLTGAKR--VSMAKDADITAQLGLVPGIISPFGLAKHPQDVVGVYFDQDMLDE 127
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKS 154
Q FHP N +I L+ DL KF+++
Sbjct: 128 QIPLTFHPNVNTHTIFLSAADLQKFIEA 155
>gi|260662816|ref|ZP_05863710.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus fermentum 28-3-CHN]
gi|260552897|gb|EEX25896.1| YbaK/prolyl-tRNA synthetase domain-containing protein
[Lactobacillus fermentum 28-3-CHN]
Length = 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYI 59
M ++ ++ L + I++ HPAV + A A + +KNLF++D KHR +Y+
Sbjct: 1 MLMNQAEVYQYLTEHGIDYEVTNHPAVFDMAAVADFPMPHPEANAKNLFVRDDKHRHYYL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V+ + +VD+K LS + G + L A E+ + + L + GSVTP +N+ R V ++
Sbjct: 61 VTVKGEKRVDLKALSAQEGTRR--LSFASEQDLQKYLDLTPGSVTPLGGLNDEQRKVEVM 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
+D+ A HP N ++ L T+DL + L G
Sbjct: 119 IDQELAAG-LVAAHPNVNTATVWLKTSDLVQLLADHG 154
>gi|332531834|ref|ZP_08407719.1| hypothetical protein PH505_aa01400 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038810|gb|EGI75252.1| hypothetical protein PH505_aa01400 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 166
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L L L I + EHP + T A +++ G KNLFL+D + R ++
Sbjct: 1 MLADKTKLAELLAHLDINYDVIEHPPLHTSLAADEFMIERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ +V+L
Sbjct: 61 VITAHNKQLDLKALSKQQGLSRLGF--ASSERLATYLKVAPGCVSMLALLNDKQNEVSLW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+D+ + HP N + L+ DL+ F P V L
Sbjct: 119 VDQDIWHGDLFHCHPFENTQTWLLSKADLEIFFNHTKHQPRVVFL 163
>gi|156103089|ref|XP_001617237.1| bifunctional aminoacyl-tRNA synthetase [Plasmodium vivax Sal-1]
gi|148806111|gb|EDL47510.1| bifunctional aminoacyl-tRNA synthetase, putative [Plasmodium vivax]
Length = 765
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L L +L+I++ + +H +++ + KNLFLKDKK ++ + +
Sbjct: 55 LCKELDELKIQYKEVKHAKANSIKDLLDMNLENSKNIIKNLFLKDKKKNYFFLCTVNWKT 114
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K LS LR E + +L + GS+TP AL + V L D K+
Sbjct: 115 VDLKYLSSLFK--TSNLRFVDEGNLKSMLNLLPGSLTPLALKFDQENLVKLYFDDELKSM 172
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQ 174
E HP+ N S+ + D+ KF + P Y+ +E GKD+
Sbjct: 173 EDMIVHPMHNYSSLYMKQEDVVKFCQLHNHAPEYIHIEE----GKDK 215
>gi|119468139|ref|ZP_01611265.1| hypothetical protein ATW7_14646 [Alteromonadales bacterium TW-7]
gi|119448132|gb|EAW29396.1| hypothetical protein ATW7_14646 [Alteromonadales bacterium TW-7]
Length = 166
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYI 59
M K +L A L L I + EHP + T A + + G KNLFL+D + R ++
Sbjct: 1 MLADKTKLEACLAHLNINYDVIEHPPLHTSLAADELLLERPGTRLKNLFLRDNEGKRHFL 60
Query: 60 VSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
V + ++D+K LS++ GL + G A E + LKV G V+ AL+N+ V +
Sbjct: 61 VITAHNKQLDLKALSKQQGLSRLG--FASSERLATYLKVAPGCVSMLALLNDKQNAVTVW 118
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
LD+ E HP N ++ L+ +DL+ F P
Sbjct: 119 LDQDIWFGELFHCHPFENTLTWILSKSDLEIFFNYTDHQP 158
>gi|194468138|ref|ZP_03074124.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
reuteri 100-23]
gi|194452991|gb|EDX41889.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
reuteri 100-23]
Length = 162
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQ 75
+I + HP V T E KYV +KNLFLK+K +Y+V+ L + ++DMK L +
Sbjct: 16 KINYQIVTHPPVYTAEQADKYVQKYQFARTKNLFLKNKA-GYYLVTILENKRLDMKKLKE 74
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQERCFFHP 134
L + PEE ++ L + G+V+PF L N+ V ++D FK ++ HP
Sbjct: 75 NLSTSRFSF-AHPEELAMK-LGITSGAVSPFNLFNDKQHQVTFIIDADIFKNEDLIGSHP 132
Query: 135 LSNDMSISLNTNDLDKFLKSIG 156
N ++ L DL + +K G
Sbjct: 133 NDNTATVILGIKDLLQIIKQNG 154
>gi|417522360|ref|ZP_12183849.1| Hypothetical protein LTSEUGA_6007 [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353639139|gb|EHC84502.1| Hypothetical protein LTSEUGA_6007 [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 175
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK--KHRFYIVSALAD 65
+L L +L I F HP V TV A + + L KNL LK+ KH FY+ +
Sbjct: 6 VLKLLNELDISFQYISHPEVKTVADHASFAADFPAQLLKNLLLKNSSGKH-FYLYILDGN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K D++ L+ L L + L A + ++EIL V G VTPFA+ + RD+ +++D
Sbjct: 65 KKADLRELA--LQLNESRLSFAKPDELIEILGVEPGGVTPFAIAHNKERDIRIIIDSSVS 122
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
A FHPL N S+ ++ DL + L G P
Sbjct: 123 ASRSLGFHPLINTASVCISKKDLLRLLAFFGYSP 156
>gi|403514626|ref|YP_006655446.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus helveticus R0052]
gi|403080064|gb|AFR21642.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus helveticus R0052]
Length = 162
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALAD 65
+LL+ L + + + HPAV T + +Y+ + KNLF+K + K +++V +
Sbjct: 5 ELLSLLDKHDVTYQAFTHPAVSTSKEADQYLKDETFVKCKNLFIKTRDKKSYFLVMLPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K D K + L L MA E+ ++E LKV G V+PF+L+N+ + L++D+ +
Sbjct: 65 KKTDWKKAQKELF--TSSLTMADEDELMEKLKVKRGLVSPFSLLNDETNTIPLVIDQ--E 120
Query: 126 AQERCFF---HPLSNDMSISLNTNDLDKFLKSIGR 157
A E F HP N +ISL DL + L S G
Sbjct: 121 AMEENNFVGVHPNDNTKTISLQWIDLARILSSYGH 155
>gi|423319200|ref|ZP_17297076.1| hypothetical protein HMPREF9250_00266 [Lactobacillus crispatus
FB049-03]
gi|423320744|ref|ZP_17298616.1| hypothetical protein HMPREF9249_00616 [Lactobacillus crispatus
FB077-07]
gi|405589724|gb|EKB63288.1| hypothetical protein HMPREF9250_00266 [Lactobacillus crispatus
FB049-03]
gi|405599119|gb|EKB72299.1| hypothetical protein HMPREF9249_00616 [Lactobacillus crispatus
FB077-07]
Length = 162
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALAD 65
++L L D I + + HPAV T + KY+ + K LF+K + + +Y++ D
Sbjct: 5 EILQLLDDHDINYQVFSHPAVFTTKKADKYLEDEDFAKCKTLFIKTRNAKNYYLLMLPED 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K+D + + L L A E + E L+V G+V+PF+L+N+ + + L++D+
Sbjct: 65 KKIDWQ--KAKAELLSSSLTFATEAELEEKLQVKTGAVSPFSLLNDQSNKIPLIVDQAAM 122
Query: 126 AQERCF-FHPLSNDMSISLNTNDLDKFLKSIGR 157
+ HP N +ISL DL + L S G
Sbjct: 123 EENNLVGVHPNDNTKTISLTWIDLARILSSYGH 155
>gi|350270185|ref|YP_004881493.1| hypothetical protein OBV_17890 [Oscillibacter valericigenes
Sjm18-20]
gi|348595027|dbj|BAK98987.1| hypothetical protein OBV_17890 [Oscillibacter valericigenes
Sjm18-20]
Length = 179
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L+ L I++ + T+E A+ +G + KNLFL ++ K +FY+++ D
Sbjct: 27 LETLGIDYDRVSSDPADTMEKCAEVSRALGVPICKNLFLCNRQKTQFYLLAMGPDKPFHT 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L APEE + E+L+ GS T L+N++ V LLLD+ E
Sbjct: 87 KDLSAQIGSAR--LSFAPEEKLWELLRCTPGSATVLGLMNDTGHAVRLLLDRDVYEAEYL 144
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP S+ + T+ L+ FL G D VDL
Sbjct: 145 SCHPCICTSSLKIKTSAVLNVFLPHTGHDVTIVDL 179
>gi|347532955|ref|YP_004839718.1| Bi-functional aminoacyl-tRNA synthetase [Roseburia hominis A2-183]
gi|345503103|gb|AEN97786.1| Bi-functional aminoacyl-tRNA synthetase, putative [Roseburia
hominis A2-183]
Length = 183
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L L IE+ + +H A MT+E A +G + KNLFL +++ FY++ D K
Sbjct: 26 LDKLNIEYERIDHEAAMTMEECADVDEALGAMICKNLFLCNRQETTFYLLMIPGDKKFKT 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E M E L + GSV+ L+N+ V LL+D+ +
Sbjct: 86 KDLSAQIHSSR--LSFAKETYMEEFLDITPGSVSVLGLMNDREHRVQLLVDRDVLKGDYI 143
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLE 165
HP N S+ + D+ +K + ++ +P +V LE
Sbjct: 144 GCHPCINTSSLRIRQKDMWEKIVPALEHEPVFVTLE 179
>gi|325660669|ref|ZP_08149299.1| hypothetical protein HMPREF0490_00031 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325473030|gb|EGC76238.1| hypothetical protein HMPREF0490_00031 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L +L I + + +H T+EA +G + KNLFL+++ K FY++ K
Sbjct: 40 LDELSIPYERVDHAVTETMEACENIDMLLGVSMCKNLFLRNRQKTAFYLLMMPGKKKFKT 99
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++LG + L A E M + L + GSV+ L+N+S V L++DK E
Sbjct: 100 KDVSKQLGTSR--LSFAEAEYMEQYLNITPGSVSVLGLMNDSTHAVHLVIDKELLDNEYI 157
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVD 163
HP N S+ + T D L+ FLK G VD
Sbjct: 158 GCHPCINTSSLKIRTEDILNVFLKHTGHTWTTVD 191
>gi|210617730|ref|ZP_03291724.1| hypothetical protein CLONEX_03948 [Clostridium nexile DSM 1787]
gi|210149172|gb|EEA80181.1| hypothetical protein CLONEX_03948 [Clostridium nexile DSM 1787]
Length = 215
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L+I + +H T+E A +G + KNLFL+++ K F+++ D K
Sbjct: 63 LDKLKIPYEGVDHDVAGTMEECAAVDEALGVTMCKNLFLRNQQKTTFFLLLIPGDKKFMT 122
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS++LG+ + L A E M + L + GSV+ L+N+ V LL+DK E
Sbjct: 123 KDLSKQLGISR--LSFAEPEYMEKFLNITPGSVSVLGLMNDKDWYVDLLIDKDLMDDEYI 180
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + +D + KFLK G P YV L
Sbjct: 181 GCHPCINTSSLKIKMDDIIKKFLKYTGHRPRYVKL 215
>gi|389586247|dbj|GAB68976.1| bifunctional aminoacyl-tRNA synthetase [Plasmodium cynomolgi strain
B]
Length = 709
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
L L +L+I++ + +H +++ + KNLFLKDKK ++ + +
Sbjct: 21 LCKELDELKIQYKEVKHAKATSIKDLLDMNLENSKNIIKNLFLKDKKKNYFFLCTVNWKT 80
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD+K LS LR E + +L + G +TP AL + V L D+ K
Sbjct: 81 VDLKYLSS--IFKTSNLRFVDEGNLKSMLNLLPGCLTPLALKCDQENIVKLYFDEELKNM 138
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPAVGKDQ 174
E HP+ N S+ + D+ KF + P Y+ +E GKD+
Sbjct: 139 EDIIIHPMHNYSSLYMKQEDVVKFCELHNHAPEYIHIEE----GKDK 181
>gi|296531915|ref|ZP_06894718.1| YbaK/prolyl-tRNA synthetase domain protein [Roseomonas cervicalis
ATCC 49957]
gi|296267781|gb|EFH13603.1| YbaK/prolyl-tRNA synthetase domain protein [Roseomonas cervicalis
ATCC 49957]
Length = 188
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ + +LARL L I HP + TV + G KNLFL+ K +++ L
Sbjct: 26 TPEGVLARLAALGIAAETLRHPPLFTVADGLALRDAMPGLHVKNLFLQPKGEGPFLLLVL 85
Query: 64 -ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+D +V + L + LG+ + A E + L V GSVTP ALVN V + +D+
Sbjct: 86 ESDRQVKVNALVRALGVARASFASA--EALWAELGVTPGSVTPLALVNSPPGRVRVAIDR 143
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HPL N S +L L +FL+ +G P +D+
Sbjct: 144 MLLEAPVIHVHPLVNTASTALAPAGLLRFLRDLGHAPEPLDI 185
>gi|357051980|ref|ZP_09113097.1| hypothetical protein HMPREF9467_00069 [Clostridium clostridioforme
2_1_49FAA]
gi|355387171|gb|EHG34198.1| hypothetical protein HMPREF9467_00069 [Clostridium clostridioforme
2_1_49FAA]
Length = 198
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L LQ+ + + +H A+ T+EA + +G + KNLFL++ +K FY++ + K
Sbjct: 42 LDSLQVPYVRVDHDALPTIEACREADQLLGTEICKNLFLRNAQKTDFYLLLMPGNKKFKT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
VLS+++G + L E M L + GSV+ L+N+ V LL+DK E
Sbjct: 102 AVLSKQIGSAR--LSFGEAEFMESFLDITPGSVSVMGLMNDRENRVRLLIDKDILEGEYF 159
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ T+DL +K L ++G VDL
Sbjct: 160 ACHPCINTSSLRFRTSDLMEKILPALGHPHTVVDL 194
>gi|418963031|ref|ZP_13514875.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|383344408|gb|EID22574.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 162
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+++++ L DL I + + +H + +V A+ + G KNLFLK+KK R FY+V
Sbjct: 3 NEEKIYQVLDDLHIAYDRLDHEPISSVIEAAEKGIVLPGQQVKNLFLKNKKGRQFYLVIL 62
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ D+K L++ LG+ L A ++ + E+L+V G+VTPF L+ + + V L++D+
Sbjct: 63 RDEKTADIKHLAE--VLGEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVDE 120
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
FHP N ++++ D +FL+
Sbjct: 121 EVDPNLTVGFHPFVNTTTLNIAYADFLRFLE 151
>gi|336066494|ref|YP_004561352.1| YbaK/prolyl-tRNA synthetase-associated domain-containing protein
[Erysipelothrix rhusiopathiae str. Fujisawa]
gi|334296440|dbj|BAK32311.1| YbaK/prolyl-tRNA synthetase-associated domain-containing protein
[Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 166
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK--HRFYIVSALA 64
Q+ L +L IE+ + H + +VE + + + G K L +K KK H FY++ A
Sbjct: 8 QITDLLHELNIEYREDHHEPIFSVEVE---IPELPGPQIKYLLVKPKKTEHEFYLILAHD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ D+K L +LG + L E M +++ V GS+T +++ + ++ +++D+
Sbjct: 65 EKHPDLKDLQAQLGTKR--LTFPTSEEMSDLIGVEFGSLTAASVIADKNHEITVIVDEAI 122
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ HP N ++ ++ DL+++L +G P Y+ L
Sbjct: 123 DRDDTIGIHPNDNSITYTIAFTDLERYLDHLGYTPRYIPL 162
>gi|336427358|ref|ZP_08607361.1| hypothetical protein HMPREF0994_03367 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009886|gb|EGN39874.1| hypothetical protein HMPREF0994_03367 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 178
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L I + + +H A+ T+EA + + KNLFL + K FY++ + K
Sbjct: 31 LDRLAISYLRLDHEAMPTIEACRDVDKRLQIHICKNLFLCNSGKTDFYLLLMPGEKKFHT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +S +LG+ + L APEE + E+L + GSVT L+N+SA+ LL + + C
Sbjct: 91 REVSSQLGVSR--LSFAPEEKLQELLDLTPGSVTVLGLMNDSAQRE--LLQEPYMG---C 143
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEA 166
HP N SI L+T D L+KFL ++ P ++DL A
Sbjct: 144 --HPCINTSSIRLSTRDVLEKFLPAVNHMPVFLDLSA 178
>gi|331085608|ref|ZP_08334692.1| hypothetical protein HMPREF0987_00995 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407495|gb|EGG86997.1| hypothetical protein HMPREF0987_00995 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 182
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L +L I + + +H T+EA +G + KNLFL+++ K FY++ K
Sbjct: 31 LDELSIPYERVDHAVTETMEACESIDMLLGVSMCKNLFLRNRQKTAFYLLMIPGKKKFKT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++LG + L A E M + L + GSV+ L+N+S V L++DK E
Sbjct: 91 KDVSKQLGTSR--LSFAEAEYMEQYLNITPGSVSVLGLMNDSNHAVHLVIDKELLDNEYI 148
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVD 163
HP N S+ + T D L+ FLK G VD
Sbjct: 149 GCHPCINTSSLKIRTEDILNVFLKHTGHTWTTVD 182
>gi|157867947|ref|XP_001682527.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68125981|emb|CAJ04054.1| putative prolyl-tRNA synthetase [Leishmania major strain Friedlin]
Length = 731
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
DQ+ A L++L ++ H TVE + +G +K LFLK KK + +A
Sbjct: 10 DQVKALLQELGLDIPIVHHDEKATVEEVLDLLHKMGIHAAGTKTLFLKSKKGELVMATAF 69
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDK 122
T D+K + + LR A E + E L V G VTPFAL+N R + LL+D+
Sbjct: 70 KSTPTDLKFI--QTVTNTKDLRFASSEVLQECLAVVQGCVTPFALINNIEKRPITLLMDR 127
Query: 123 GFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+A + F ND + + +L K+L+ +G VD A A
Sbjct: 128 SLEASAQPLAFCVCRNDYTAVITFEELKKYLEKVGYAYKLVDFGAASA 175
>gi|218133565|ref|ZP_03462369.1| hypothetical protein BACPEC_01432 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990940|gb|EEC56946.1| hypothetical protein BACPEC_01432 [[Bacteroides] pectinophilus ATCC
43243]
Length = 347
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L +E+ + +H T+E +G + KNLFL ++ K +FY++ D
Sbjct: 190 LDSLGMEYYRTDHEPATTMEVCNCIDSILGTLICKNLFLCNRQKTQFYMLMMPGDKVFKT 249
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++G + L A EE M E L + GSV+ L+N+ +V LL+D+ E
Sbjct: 250 KDLSKQIGSAR--LSFADEEYMQEFLDITPGSVSIMGLMNDKDNNVQLLIDREVLEGESL 307
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ LNT + ++KFL ++ + VDL
Sbjct: 308 GCHPCINTSSLRLNTKEVMEKFLPAVHHEAIIVDL 342
>gi|221061291|ref|XP_002262215.1| bi-functional aminoacyl-trna synthetase [Plasmodium knowlesi strain
H]
gi|193811365|emb|CAQ42093.1| bi-functional aminoacyl-trna synthetase,putative [Plasmodium
knowlesi strain H]
Length = 715
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 5 KDQLLAR-LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
K ++L R L +L+I++ + +H +++ + KNLFLKDKK ++ + +
Sbjct: 17 KAEILCRELDELKIQYKEVKHAKANSIKDLLDMNLENSKNIIKNLFLKDKKKNYFFLCTV 76
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
VD+K LS LR E + +L + G +TP AL + V L D+
Sbjct: 77 NWKTVDLKYLST--IFKTSNLRFVDEGNLKSMLNLLPGCLTPLALKCDQENLVKLYFDEE 134
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
K E HP+ N S+ + D+ KF + P Y+ +E
Sbjct: 135 LKNMENIIVHPMHNYSSLYMKQEDVVKFCELHNHAPEYIHIE 176
>gi|423336086|ref|ZP_17313837.1| putative DNA-binding protein [Lactobacillus reuteri ATCC 53608]
gi|337729289|emb|CCC04417.1| putative DNA-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 162
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQ 75
+I + HP V T E KYV +KNLFLK+K +Y+V+ L + ++DMK L +
Sbjct: 16 KINYQIVTHPPVYTAEQADKYVQKYEFARTKNLFLKNKA-GYYLVTILENKRLDMKKLKE 74
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF-FHP 134
L + A E ++ L + G+V+PF L N+ + ++D E+ HP
Sbjct: 75 NLSTSR--FSFAHPEELITKLGITSGAVSPFNLFNDKHHQITFIIDADILKNEKLIGCHP 132
Query: 135 LSNDMSISLNTNDLDKFLKSIG 156
N ++ L DL + +K G
Sbjct: 133 NDNTATVILGIKDLLQIIKQNG 154
>gi|167766195|ref|ZP_02438248.1| hypothetical protein CLOSS21_00689 [Clostridium sp. SS2/1]
gi|317499326|ref|ZP_07957597.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429762594|ref|ZP_19294982.1| YbaK/proline--tRNA ligase associated domain protein [Anaerostipes
hadrus DSM 3319]
gi|167712275|gb|EDS22854.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sp. SS2/1]
gi|291560129|emb|CBL38929.1| Ala-tRNA(Pro) hydrolase [butyrate-producing bacterium SSC/2]
gi|316893388|gb|EFV15599.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429181414|gb|EKY22577.1| YbaK/proline--tRNA ligase associated domain protein [Anaerostipes
hadrus DSM 3319]
Length = 169
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTV-EAQAKYVGNIGGGL-SKNLFLKDK--KHR 56
M ++ +L L + IE+ +EH AV TV E + + N G+ +KNLFL+D KH
Sbjct: 4 MNENRKIVLDTLNEQNIEYEMFEHQAVYTVDEIEDSDLWNHENGIGAKNLFLRDGSGKHH 63
Query: 57 FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV 116
F ++ D + D+K + +G + L A E +++ L + GSV+P ++N+ +
Sbjct: 64 FLVIIR-EDKQADLKKVRDEIGSSR--LSFASAERLMKYLNIEPGSVSPLGVLNDQECVI 120
Query: 117 ALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+ D+ K E HP N +I + DL +K G ++++E
Sbjct: 121 PVFFDEDLKEYEYIAVHPNDNTATIWMKLADLVNVIKLHGNQVKFINVE 169
>gi|241896650|ref|ZP_04783946.1| YbaK/prolyl-tRNA synthetase [Weissella paramesenteroides ATCC
33313]
gi|241870131|gb|EER73882.1| YbaK/prolyl-tRNA synthetase [Weissella paramesenteroides ATCC
33313]
Length = 166
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSALADTKVDMKVLSQ 75
I +++ +H AV T+ A+A + + KNLFLK +K + F++ + KVD K L+
Sbjct: 18 IPYNEVKHEAVWTM-AEANQLDLPNDVVIKNLFLKKRKTNEFFLCIVVGQKKVDFKTLAP 76
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
+L L + L A E + ++L + G VTP L ++ V +LLDK + + HP
Sbjct: 77 QLQLSRSKLGFANEMDLADVLGLKPGFVTPLGLPHDEQNQVTVLLDKELQKVDSIGIHPN 136
Query: 136 SNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
SN ++ + DL K +K VDL+
Sbjct: 137 SNTATVFVTYEDLLKIIKYSHHQMMIVDLD 166
>gi|227873030|ref|ZP_03991325.1| YbaK/prolyl-tRNA synthetase associated protein [Oribacterium sinus
F0268]
gi|227841105|gb|EEJ51440.1| YbaK/prolyl-tRNA synthetase associated protein [Oribacterium sinus
F0268]
Length = 183
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL-ADTKVDMKVLSQ 75
I + + +HP T+E +G + KNLFL + KH +Y + + D K LS
Sbjct: 32 IAYERVDHPEAHTMEDCIPIEEALGAKVFKNLFLTNSKHSYYYLLLMPGDKPFKTKELSA 91
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
+LG+ + L A E M E+L GS + F L+++ V LL+DK +E HP
Sbjct: 92 QLGVSR--LSFAEPEEMEEVLGCTPGSSSIFGLIHDKEDLVELLVDKDLMKEEYLCAHPC 149
Query: 136 SNDMSISLNTNDL-DKFLKS 154
N ++ + T+DL KFLKS
Sbjct: 150 HNIATLKVKTSDLFGKFLKS 169
>gi|255282836|ref|ZP_05347391.1| YbaK/prolyl-tRNA synthetase associated region [Bryantella
formatexigens DSM 14469]
gi|255266610|gb|EET59815.1| hypothetical protein BRYFOR_08189 [Marvinbryantia formatexigens DSM
14469]
Length = 179
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Query: 5 KDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
K+ + RL D L I + + +HP M+++ +G + KNLFL +++ FY++
Sbjct: 17 KEMAVYRLLDELGISYERVDHPPAMSIDDCHNVDEILGIQICKNLFLCNRQQTDFYLLMM 76
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
K LS+++G + L A E M E+L + GSV+ L+N++ V LL+D+
Sbjct: 77 PGKKPFKTKELSRQIGTAR--LSFADERHMEELLNITPGSVSIMGLMNDTQNRVRLLIDE 134
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEA 166
E FHP N SI D+ KFL ++ D V LE
Sbjct: 135 DVFHDEYVGFHPCINTSSIKAKAADIWKKFLPAVHHDYTVVHLEG 179
>gi|317486257|ref|ZP_07945090.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Bilophila wadsworthia 3_1_6]
gi|316922503|gb|EFV43756.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Bilophila wadsworthia 3_1_6]
Length = 164
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
++L L + I + H V T+E + + ++KNLFL+D + + + + L
Sbjct: 8 KVLDVLDNAGIRYRMVSHDPVYTIEEMERLHLDADAEIAKNLFLRDARGKRHFLVVLCSC 67
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K VD+K L R LG L A E+ + L + G+VTP ++N+ AR V +L D+
Sbjct: 68 KTVDLKAL--RGQLGTSALSFASEDRLKRFLGLEKGAVTPLGILNDEARAVEVLFDRDLA 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP N ++ L +DL+ ++S G ++V
Sbjct: 126 RLPSLGVHPNRNTATVFLAFSDLESLIRSHGNSVSFV 162
>gi|256544703|ref|ZP_05472075.1| DNA-binding protein [Anaerococcus vaginalis ATCC 51170]
gi|256399592|gb|EEU13197.1| DNA-binding protein [Anaerococcus vaginalis ATCC 51170]
Length = 171
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
S ++ RL L I++ EHP T E KY+ G +KNLFL ++K+R Y + +
Sbjct: 3 SSKKVFDRLNKLNIKYDMVEHPPAETTEEADKYIEGKKGARTKNLFLANRKNRRYYLIVM 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K+ + + L + G+ + + EI++ +G ++ F L+N + ++ + DK
Sbjct: 63 DDKKM-ISLKDYNKLLNEKGMHFLDPKKVYEIMEQEVGIISVFGLMN-TNENIKVFFDKD 120
Query: 124 F-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
+ + FHP N ++ + D+ K +K G D D +A
Sbjct: 121 MIEENDLMTFHPDDNTKTLFIKNEDIFKLVKDSGYDYEIFDFKA 164
>gi|352517454|ref|YP_004886771.1| putative acetyltransferase [Tetragenococcus halophilus NBRC 12172]
gi|348601561|dbj|BAK94607.1| putative acetyltransferase [Tetragenococcus halophilus NBRC 12172]
Length = 341
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
++ Q+ + L + I + EH AV T+ + +I G KNLFL+ K FY++
Sbjct: 187 AQHQIYSFLNEANISYQLLEHKAVYTIN---EIDFDIPGISVKNLFLQGKDD-FYLLILT 242
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D + +K ++Q +G + L A E+ + ++L G+V+P L+ + + V L++D+
Sbjct: 243 EDKRAILKTIAQEVG--ERHLSFASEQKLSQLLHTTQGAVSPLGLLFDKEQKVQLIIDEQ 300
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
+ + FHP ND ++ + D FL + P Y++
Sbjct: 301 IPVRGKISFHPNRNDKTLIFDFKDFLTFLTKVNHPPKYIN 340
>gi|148543591|ref|YP_001270961.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri DSM 20016]
gi|184152999|ref|YP_001841340.1| DNA-binding protein [Lactobacillus reuteri JCM 1112]
gi|148530625|gb|ABQ82624.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri DSM 20016]
gi|183224343|dbj|BAG24860.1| putative DNA-binding protein [Lactobacillus reuteri JCM 1112]
Length = 162
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L + +I + HP V T E KYV +KNLFLK+K +Y+V+ L + +++MK
Sbjct: 12 LDNEKINYQIVTHPPVYTAEQADKYVQEYQFARTKNLFLKNKA-GYYLVTILENKRLNMK 70
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQERC 130
L + L + PEE ++ L + G+V+PF L N+ V ++D FK ++
Sbjct: 71 KLKENLSTSRFSF-ARPEELAMK-LGITSGAVSPFNLFNDKQHQVTFIIDADIFKNEDLI 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIG 156
HP N ++ L DL + +K G
Sbjct: 129 GCHPNINTATVILGIKDLLQIIKQNG 154
>gi|303231804|ref|ZP_07318522.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica ACS-049-V-Sch6]
gi|302513531|gb|EFL55555.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica ACS-049-V-Sch6]
Length = 161
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEVTDHAPLFSMDDKPDVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +IL++ G V+PF L+N+ R V +D +K
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILRIKPGHVSPFCLLNDEERKVHYYIDADYK-DNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L DL K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKDLVKLIEEHGTTIEYI 159
>gi|345887994|ref|ZP_08839124.1| hypothetical protein HMPREF0178_01898 [Bilophila sp. 4_1_30]
gi|345041211|gb|EGW45395.1| hypothetical protein HMPREF0178_01898 [Bilophila sp. 4_1_30]
Length = 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
++L L + I + H V T+E + + ++KNLFL+D + + + + L
Sbjct: 8 KVLDVLDNAGIRYRMVSHDPVYTIEEMERLHLDADAEIAKNLFLRDARGKRHFLVVLCSC 67
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K VD+K L R LG L A E+ + L + G+VTP ++N+ R V +L D+
Sbjct: 68 KAVDLKAL--RGQLGTSALSFASEDRLKRFLGLEKGAVTPLGILNDEVRAVEVLFDRDLA 125
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP N ++ L +DL+ ++S G ++V
Sbjct: 126 GLPSLGVHPNRNTATVFLAFSDLESLIRSHGNSVSFV 162
>gi|261313051|ref|ZP_05952248.1| YbaK/prolyl-tRNA synthetase associated region [Brucella
pinnipedialis M163/99/10]
gi|261302077|gb|EEY05574.1| YbaK/prolyl-tRNA synthetase associated region [Brucella
pinnipedialis M163/99/10]
Length = 122
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M + +L L L I + EHP + TV G I GG +KNLFLKDKK F++V
Sbjct: 8 MPLTPKELHDLLHKLGIGVTTVEHPPLFTVADSQNLRGEIPGGHTKNLFLKDKKDNFFLV 67
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDV 116
+ D VD+K + Q +G + E ++E L V GSVT F N++ V
Sbjct: 68 TVEEDAVVDLKSIHQLIG-AASRVSFGKPEKLMEYLGVIPGSVTVFGAANDTNHRV 122
>gi|363898818|ref|ZP_09325338.1| hypothetical protein HMPREF9625_02022 [Oribacterium sp. ACB1]
gi|395208751|ref|ZP_10397916.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. ACB8]
gi|361960169|gb|EHL13420.1| hypothetical protein HMPREF9625_02022 [Oribacterium sp. ACB1]
gi|394705352|gb|EJF12878.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. ACB8]
Length = 187
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L L I + + +HP T+E A + KNLFL + KH FY + + KV K
Sbjct: 31 LDKLGISYERVDHPEAHTMEDCAVIEEAFSARVCKNLFLTNSKHSFYYLLMMPGEKV-FK 89
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+G G L A E M +L GS + F L+++ V LL+DK +E
Sbjct: 90 TAELSKAIGCGHLSFADGEEMERVLGCTPGSASVFGLMHDKEDLVELLVDKDLMKEEYLC 149
Query: 132 FHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEAN 167
HP N ++ L T D+ KFLK+ V L+
Sbjct: 150 AHPCHNIATLKLRTKDIFTKFLKATKHYKTEVSLKGE 186
>gi|161507845|ref|YP_001577809.1| hypothetical protein lhv_1586 [Lactobacillus helveticus DPC 4571]
gi|160348834|gb|ABX27508.1| hypothetical protein lhv_1586 [Lactobacillus helveticus DPC 4571]
Length = 162
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALAD 65
+LL+ L + + + HPAV T + +Y+ + KNLF+K + K +++V +
Sbjct: 5 ELLSLLDKHDVTYQAFTHPAVSTSKEADQYLKDETFVKCKNLFIKTRDKKSYFLVMLPEN 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K+D K + L L MA E+ ++E LKV G V+PF+L+N+ + L++D+ +
Sbjct: 65 KKIDWKKAQKELF--TSSLTMADEDELMEKLKVKRGLVSPFSLLNDETNTIPLVIDQ--E 120
Query: 126 AQERCFF---HPLSNDMSISLNTNDLDKFLKSIGR 157
A E F HP N +ISL L + L S G
Sbjct: 121 AMEENNFVGVHPNDNTKTISLQWIVLARILSSYGH 155
>gi|266624122|ref|ZP_06117057.1| putative YbaK/prolyl-tRNA synthetase domain protein [Clostridium
hathewayi DSM 13479]
gi|288864047|gb|EFC96345.1| putative YbaK/prolyl-tRNA synthetase domain protein [Clostridium
hathewayi DSM 13479]
Length = 200
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + + +H T+EA + + KNLFL++ +K+ FY++ K
Sbjct: 43 LDKLGIAYQRLDHDPTATIEACHDIDALLETEICKNLFLRNAQKNSFYLLMIPGCKKFRT 102
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
VLS+++G + L A E M + L + GSV+ L+N+ V LL+D+ QE
Sbjct: 103 AVLSKQIGSAR--LSFAEPEFMEQYLNITPGSVSVLGLMNDKENRVRLLIDRDILEQEFL 160
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEAN 167
HP N S+ + T+D+ + FL IG VDL +
Sbjct: 161 GCHPCINTSSLKIRTSDIVNIFLPYIGHSYTLVDLPCD 198
>gi|259502649|ref|ZP_05745551.1| YbaK/prolyl-tRNA synthetase domain protein [Lactobacillus antri DSM
16041]
gi|259169294|gb|EEW53789.1| YbaK/prolyl-tRNA synthetase domain protein [Lactobacillus antri DSM
16041]
Length = 159
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQR 76
+ + HP V T + +YV +KNLFL+ + FY+V ++D++ L ++
Sbjct: 14 VSYQLINHPPVYTAQEADQYVKGYQFARTKNLFLRAGQ-AFYLVVIDEQKRLDLRALRKQ 72
Query: 77 LGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE-RCFFHPL 135
L + L+ A + + E L + G+V+P LVN S DV +++D+ QE R HP
Sbjct: 73 LHSSR--LQFARADQLQEQLGIAAGAVSPLNLVNNSKHDVRVVMDRTIIEQEHRIGCHPN 130
Query: 136 SNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+N ++ L DL +K G + +DL
Sbjct: 131 TNRQTVMLAIPDLLALIKRWGNELIVLDL 159
>gi|227508774|ref|ZP_03938823.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227191807|gb|EEI71874.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 161
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSK---NLFLKDKKHRFYIVSALAD-TK 67
L DL+I + + +HPA+ T++ N GL + L K K +FY+ L D TK
Sbjct: 13 LTDLKINYQRVDHPAIWTMDD-----PNAPKGLPEVKNLLLKKKKSDQFYLY--LTDNTK 65
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
VD K L+ + GL L A E+ + +L V G VTP AL++++ +V +LL+ K
Sbjct: 66 VDFKSLADQFGLAHSRLTFASEDELENLLGVVSGMVTPLALMHDTKHEVQVLLNSRLKKL 125
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
HP +N +I L DL K L + P VD
Sbjct: 126 PLISAHPNTNTATILLTWTDLLKVLDEMDHHPIMVD 161
>gi|429759745|ref|ZP_19292241.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica KON]
gi|429179335|gb|EKY20591.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica KON]
Length = 161
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEVTDHAPLFSMDDKPDVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + EILK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKEHNLKK--ISFGSEEELWEILKIKPGHVSPFCLLHDEERKVHYYIDADYKDN-LI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND + L DL K ++ G Y+
Sbjct: 128 GIHPNQNDAIVWLQGKDLVKLIEEHGTIIEYI 159
>gi|355670718|ref|ZP_09057465.1| hypothetical protein HMPREF9469_00502 [Clostridium citroniae
WAL-17108]
gi|354816155|gb|EHF00744.1| hypothetical protein HMPREF9469_00502 [Clostridium citroniae
WAL-17108]
Length = 198
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L + +++ +H A+ T+EA + +G + KNLFL++ +K FY++ + K
Sbjct: 42 LDSLGVSYTRVDHDALPTIEACLEVDRLLGSEICKNLFLRNAQKTDFYLLLMPGNKKFKT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+LS+++G + L E M E + + GSVT L+N+ A V LL+DK +
Sbjct: 102 ALLSKQIGSAR--LSFGEPEFMEEFMDLTPGSVTVMGLMNDKAGRVRLLIDKDILDGKSF 159
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + DL DK L ++G VDL
Sbjct: 160 GCHPCINTSSLMFSVRDLIDKILPAMGHPYTVVDL 194
>gi|238019483|ref|ZP_04599909.1| hypothetical protein VEIDISOL_01352 [Veillonella dispar ATCC 17748]
gi|237864182|gb|EEP65472.1| hypothetical protein VEIDISOL_01352 [Veillonella dispar ATCC 17748]
Length = 161
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEVTDHAPLFSMDDKPNVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +ILK+ G V+PF L+++ AR V +D +K
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILKIKPGHVSPFCLLHDEARKVHYYIDADYK-DNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L DL ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKDLVNLIEEHGTTIEYI 159
>gi|227363447|ref|ZP_03847571.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri MM2-3]
gi|325681944|ref|ZP_08161462.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri MM4-1A]
gi|227071547|gb|EEI09846.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri MM2-3]
gi|324978588|gb|EGC15537.1| Ala-tRNA(Pro) hydrolase [Lactobacillus reuteri MM4-1A]
Length = 173
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L + +I + HP V T E KYV +KNLFLK+K +Y+V+ L + +++MK
Sbjct: 23 LDNEKINYQIVTHPPVYTAEQADKYVQEYQFARTKNLFLKNKA-GYYLVTILENKRLNMK 81
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQERC 130
L + L + PEE ++ L + G+V+PF L N+ V ++D FK ++
Sbjct: 82 KLKENLSTSRFSF-ARPEELAMK-LGITSGAVSPFNLFNDKQHQVTFIIDADIFKNEDLI 139
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIG 156
HP N ++ L DL + +K G
Sbjct: 140 GCHPNINTATVILGIKDLLQIIKQNG 165
>gi|401679556|ref|ZP_10811483.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
sp. ACP1]
gi|400219490|gb|EJO50358.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
sp. ACP1]
Length = 161
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LHDHHIDFEVTDHAPLFSMDDKPDVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + EILK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKDHNLKK--ISFGSEEELWEILKIKPGHVSPFCLLHDEERKVHYYIDADYK-DNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L DL K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKDLVKLIEEHGTIFEYI 159
>gi|291548535|emb|CBL21643.1| Uncharacterized conserved protein [Ruminococcus sp. SR1/5]
Length = 187
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H A+MT+EA +G + KNLFL ++ K FY++ +
Sbjct: 32 LDSLGIEYKRADHEALMTMEACEAVDQLLGAQICKNLFLCNRQKTDFYLLLMPGEKPFKT 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++G + L A E M E L + GS++ LV + + V L++DK +E
Sbjct: 92 KFLSKQIGTAR--LSFADGEQMEEYLNITPGSLSLMGLVFDKEKKVHLVIDKEVLDEEYF 149
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N ++ + T+D+ +K L ++G + V+L
Sbjct: 150 GCHPCINTSTLLMKTSDVKEKILPALGHEYQVVEL 184
>gi|304320322|ref|YP_003853965.1| DNA-binding protein [Parvularcula bermudensis HTCC2503]
gi|303299224|gb|ADM08823.1| DNA-binding protein, putative [Parvularcula bermudensis HTCC2503]
Length = 168
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 41 GGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPL 100
G G SK+L L DK +V+ A + +++ LS+ LG G+ L A +TM + L V
Sbjct: 43 GPGHSKSLLLTDKSGALILVTVPAMVRANLRGLSEALGTGR--LSFAAPDTMEQSLGVSP 100
Query: 101 GSVTPFALVNESARDV-ALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
GS+TP AL+N+ R + ++L + + HPL N S+ L+ L F+ + R P
Sbjct: 101 GSLTPLALINDDERRIDRVVLATELISSPTIWCHPLRNTASVGLSPEALIAFVTAFSRQP 160
>gi|383113663|ref|ZP_09934435.1| hypothetical protein BSGG_3358 [Bacteroides sp. D2]
gi|313695823|gb|EFS32658.1| hypothetical protein BSGG_3358 [Bacteroides sp. D2]
Length = 187
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
++++ A L L I + HPA+MT+E A+ +G K+LFL +K+ ++++ A
Sbjct: 28 ENKIYATLDKLGIAYQSLHHPAIMTIEEGAEIAQKLGCTSCKSLFLTNKQQEYFMLLLPA 87
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ K+ K L+ + +G L A E+ M +L G+V+ L+ + V LL+DK
Sbjct: 88 NKKLKTKELAGQ--IGSSHLSFASEKAMENLLCTFPGAVSILGLIYDKENKVQLLIDKEI 145
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
HP N S+ + D+ K L
Sbjct: 146 LESTYIGCHPCVNTCSLKIRLEDILKIL 173
>gi|313892705|ref|ZP_07826286.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
sp. oral taxon 158 str. F0412]
gi|313442636|gb|EFR61047.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
sp. oral taxon 158 str. F0412]
Length = 161
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +ILK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILKIKPGHVSPFCLLHDEDRKVHYYIDADYK-DNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP ND ++ L DL K ++ G Y+ L
Sbjct: 128 GIHPNQNDATVWLQGKDLVKLIEEHGTIVEYITL 161
>gi|345515415|ref|ZP_08794917.1| hypothetical protein BSEG_02268 [Bacteroides dorei 5_1_36/D4]
gi|423231444|ref|ZP_17217847.1| hypothetical protein HMPREF1063_03667 [Bacteroides dorei
CL02T00C15]
gi|423238435|ref|ZP_17219551.1| hypothetical protein HMPREF1065_00174 [Bacteroides dorei
CL03T12C01]
gi|423246033|ref|ZP_17227106.1| hypothetical protein HMPREF1064_03312 [Bacteroides dorei
CL02T12C06]
gi|345455734|gb|EEO46127.2| hypothetical protein BSEG_02268 [Bacteroides dorei 5_1_36/D4]
gi|392627209|gb|EIY21245.1| hypothetical protein HMPREF1063_03667 [Bacteroides dorei
CL02T00C15]
gi|392637018|gb|EIY30894.1| hypothetical protein HMPREF1064_03312 [Bacteroides dorei
CL02T12C06]
gi|392648118|gb|EIY41808.1| hypothetical protein HMPREF1065_00174 [Bacteroides dorei
CL03T12C01]
Length = 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y ++ + L L I + + EH ++T++ ++ +G KNLFL +K+ ++++
Sbjct: 4 GYVQNTIFELLSRLGIGYEKLEHSPIITMKEGSEIAYKLGSTSCKNLFLCNKRQEYFMLM 63
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AD K+ K ++++ +G L A E M +L G+V+ +L+ + + V LL+D
Sbjct: 64 LPADKKLSAKNVARQ--IGSPHLSFASAEDMERLLHTYPGAVSVLSLIYDKEKRVQLLID 121
Query: 122 KGFKAQERCFFHPLSNDMSISLNTND-LDKFLKSIGRD 158
KG HP +N S+ + D L +L + G D
Sbjct: 122 KGLMNVTYIGCHPCTNTCSLKIKMEDILTVWLPATGHD 159
>gi|212693247|ref|ZP_03301375.1| hypothetical protein BACDOR_02758 [Bacteroides dorei DSM 17855]
gi|212664198|gb|EEB24770.1| YbaK/proline--tRNA ligase associated domain protein [Bacteroides
dorei DSM 17855]
Length = 174
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y ++ + L L I + + EH ++T++ ++ +G KNLFL +K+ ++++
Sbjct: 13 GYVQNTIFELLSRLGIGYEKLEHSPIITMKEGSEIAYKLGSTSCKNLFLCNKRQEYFMLM 72
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AD K+ K ++++ +G L A E M +L G+V+ +L+ + + V LL+D
Sbjct: 73 LPADKKLSAKNVARQ--IGSPHLSFASAEDMERLLHTYPGAVSVLSLIYDKEKRVQLLID 130
Query: 122 KGFKAQERCFFHPLSNDMSISLNTND-LDKFLKSIGRD 158
KG HP +N S+ + D L +L + G D
Sbjct: 131 KGLMNVTYIGCHPCTNTCSLKIKMEDILTVWLPATGHD 168
>gi|255526649|ref|ZP_05393555.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509682|gb|EET86016.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 126
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 42 GGLSKNLFLKDKKHRFYIVSALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPL 100
G KNLFL+++K + + + ++K VD+K LS+ +G L EE + L +
Sbjct: 5 GAGCKNLFLRNRKGDIHYLVVVEESKTVDLKKLSK--DIGSTPLSFGSEERLYNNLGLMR 62
Query: 101 GSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPA 160
GSVTP L+N + + V L++D ++ HP N +I L+ DL+KF+ G + +
Sbjct: 63 GSVTPMGLINNTDKKVKLIIDSDLAKSQKIAVHPNVNTATIVLSLKDLEKFVHWCGNEFS 122
Query: 161 YVDL 164
Y+ +
Sbjct: 123 YIKI 126
>gi|303229581|ref|ZP_07316369.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica ACS-134-V-Col7a]
gi|302515706|gb|EFL57660.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
atypica ACS-134-V-Col7a]
Length = 161
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LHDHHIDFEITDHAPLFSMDDKPDVELPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + E+LK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKDHNLKK--ISFGSEEELWELLKIKPGHVSPFCLLHDEERKVHYYIDADYK-DNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L DL K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKDLVKLIEEHGTIVEYI 159
>gi|265753624|ref|ZP_06088979.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263235338|gb|EEZ20862.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 183
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y ++ + L L I + + EH ++T++ ++ +G KNLFL +K+ ++++
Sbjct: 22 GYVQNTIFELLSRLGIGYEKLEHSPIITMKEGSEIAYKLGSTSCKNLFLCNKRQEYFMLM 81
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AD K+ K ++++ +G L A E M +L G+V+ +L+ + + V LL+D
Sbjct: 82 LPADKKLSAKNVARQ--IGSPHLSFASAEDMERLLHTYPGAVSVLSLIYDKEKRVQLLID 139
Query: 122 KGFKAQERCFFHPLSNDMSISLNTND-LDKFLKSIGRD 158
KG HP +N S+ + D L +L + G D
Sbjct: 140 KGLMNVTYIGCHPCTNTCSLKIKMEDILTVWLPATGHD 177
>gi|237709973|ref|ZP_04540454.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456066|gb|EEO61787.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 190
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVS 61
Y ++ + L L I + + EH ++T++ ++ +G KNLFL +K+ ++++
Sbjct: 29 GYVQNTIFELLSRLGIGYEKLEHSPIITMKEGSEIAYKLGSTSCKNLFLCNKRQEYFMLM 88
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
AD K+ K ++++ +G L A E M +L G+V+ +L+ + + V LL+D
Sbjct: 89 LPADKKLSAKNVARQ--IGSPHLSFASTEDMERLLHTYPGAVSVLSLIYDKEKRVQLLID 146
Query: 122 KGFKAQERCFFHPLSNDMSISLNTND-LDKFLKSIGRD 158
KG HP +N S+ + D L +L + G D
Sbjct: 147 KGLMNVTYIGCHPCTNTCSLKIKMEDILTVWLPATGHD 184
>gi|302387198|ref|YP_003823020.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Clostridium saccharolyticum WM1]
gi|302197826|gb|ADL05397.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
saccharolyticum WM1]
Length = 193
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L +L + + + +H + T+EA + + + KNLFL++ +K FY++ K
Sbjct: 36 LDNLNVSYQRVDHSPLPTIEACQEVDALLKIDICKNLFLRNAQKTSFYLLLLPGRKKFRT 95
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L++++G + L A E M + L + GSV+ L+N+ R V LL+DK + E
Sbjct: 96 AALTKQIGSSR--LSFAEAEYMAQFLDITPGSVSVLGLMNDKDRRVRLLIDKDVLSNEYF 153
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ T D LDK L +I + VDL
Sbjct: 154 GCHPCINTSSLKFKTADLLDKILPAIPCEYTLVDL 188
>gi|169333646|ref|ZP_02860839.1| hypothetical protein ANASTE_00030 [Anaerofustis stercorihominis DSM
17244]
gi|169259640|gb|EDS73606.1| YbaK/proline--tRNA ligase associated domain protein [Anaerofustis
stercorihominis DSM 17244]
Length = 161
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG--LSKNLFLKD-KKHRFYIV 60
+K + K+ I++ EH V T++ + NI G ++KNLFL+D KK +Y+V
Sbjct: 2 NKQETYEYFKNSNIDYEVVEHEKVFTIDEVDEL--NIPGKEKIAKNLFLRDDKKLNYYLV 59
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
+ A K D+K S R +G L A + + IL V GSVTP A++N+ V +
Sbjct: 60 TLPAHKKADLK--SLRKEIGSRRLSFAQNKDVENILNVTAGSVTPIAVINDVGNKVISVF 117
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
D+ K + HP+ N ++ ++ DL K +K
Sbjct: 118 DEELK-NKAIGIHPMENSATVFISFEDLIKSIK 149
>gi|421489653|ref|ZP_15937030.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK1138]
gi|400374720|gb|EJP27636.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK1138]
Length = 162
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Query: 4 SKDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVS 61
+K+ ++ +L D L+I + + +H + +V A+ + G KNLFLK+KK R FY+V
Sbjct: 2 TKESMIYQLLDELKISYVRLDHEPIFSVIEAAEKGVVLPGQQVKNLFLKNKKGRQFYLVI 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ D+K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D
Sbjct: 62 LRDEKTADIKHLAE--ILDEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ FHP N ++++ D +FL+
Sbjct: 120 EEVDPNLTVGFHPFVNTTTLNIAYADFLRFLE 151
>gi|160886185|ref|ZP_02067188.1| hypothetical protein BACOVA_04192 [Bacteroides ovatus ATCC 8483]
gi|336414408|ref|ZP_08594754.1| hypothetical protein HMPREF1017_01862 [Bacteroides ovatus
3_8_47FAA]
gi|423289367|ref|ZP_17268217.1| hypothetical protein HMPREF1069_03260 [Bacteroides ovatus
CL02T12C04]
gi|423297507|ref|ZP_17275568.1| hypothetical protein HMPREF1070_04233 [Bacteroides ovatus
CL03T12C18]
gi|156108070|gb|EDO09815.1| YbaK/proline--tRNA ligase associated domain protein [Bacteroides
ovatus ATCC 8483]
gi|335933520|gb|EGM95522.1| hypothetical protein HMPREF1017_01862 [Bacteroides ovatus
3_8_47FAA]
gi|392666370|gb|EIY59884.1| hypothetical protein HMPREF1070_04233 [Bacteroides ovatus
CL03T12C18]
gi|392668063|gb|EIY61568.1| hypothetical protein HMPREF1069_03260 [Bacteroides ovatus
CL02T12C04]
Length = 187
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
++++ A L L I + HPA+MT+E A+ +G K+LFL +K+ ++++ A
Sbjct: 28 ENKIYATLDKLGIAYQSLHHPAIMTMEEGAEIAQKLGCTSCKSLFLTNKQQEYFMLLLPA 87
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ K+ K L+ + +G L A E+ M +L G+V+ L+ + V LL+DK
Sbjct: 88 NKKLKTKELAGQ--IGSSHLSFASEKAMENLLCTFPGAVSILGLIYDKENKVQLLIDKEI 145
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
HP N S+ + D+ K L
Sbjct: 146 LESTYIGCHPCVNTCSLKIRLEDILKIL 173
>gi|319940267|ref|ZP_08014619.1| YbaK/prolyl-tRNA synthetase associated region [Streptococcus
anginosus 1_2_62CV]
gi|319810569|gb|EFW06905.1| YbaK/prolyl-tRNA synthetase associated region [Streptococcus
anginosus 1_2_62CV]
Length = 162
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 4 SKDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVS 61
+K+ ++ +L D L+I +++ +H + +V A+ + G KNLFLK+KK R FY+V
Sbjct: 2 TKESMIYQLLDELKISYNRLDHEPISSVIEAAEKGIVLPGQQVKNLFLKNKKGRQFYLVI 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ D+K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D
Sbjct: 62 LRDEKTADIKHLAE--ILDEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ FHP N ++++ D +FL+
Sbjct: 120 EEVDPNLTVGFHPFVNTTTLNIAYADFLRFLE 151
>gi|313112543|ref|ZP_07798208.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625143|gb|EFQ08433.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 185
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 12 LKDLQIEFSQYEHPAVM--TVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKV 68
L L I+F + +H + T+E + + KNLFL ++ K FY++ D
Sbjct: 28 LDKLGIQFWRTDHGWMKADTMEDCHVIDACLNATVCKNLFLCNRQKTNFYLLMMPGDKPF 87
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K LS +LG+ + L A E M + L GS + L N++ V LL+D+ KA E
Sbjct: 88 KTKELSHQLGIAR--LSFASPEDMEQYLDCTPGSSSIMGLANDAENKVQLLMDENIKAGE 145
Query: 129 RCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ L T D L+ FL ++ +P +V L
Sbjct: 146 YLGCHPCINTSSLKLRTADVLETFLPAVHHEPIFVHL 182
>gi|341821134|emb|CCC57472.1| YbaK/prolyl-tRNA synthetase [Weissella thailandensis fsh4-2]
Length = 166
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDMKVLSQ 75
I++++ +H AV T+ A+A + + KNLFLK +K +++ + K+D K L+
Sbjct: 18 IQYNEVKHDAVWTM-AEASQLELPNDTVIKNLFLKKRKTAEYFLCVVVGHKKIDFKTLAP 76
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
+L L + L A E + ++L + G VTP L ++ + V +LLDK + + HP
Sbjct: 77 QLQLSRNKLNFANEMDLADVLGLKPGFVTPLGLPHDKKQQVTVLLDKELQNVDAIGIHPN 136
Query: 136 SNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
+N ++ + DL K + + VD +
Sbjct: 137 TNTATVFIKYEDLLKLITRSQHEMVVVDFD 166
>gi|146084142|ref|XP_001464936.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
infantum JPCM5]
gi|134069031|emb|CAM67175.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
infantum JPCM5]
Length = 810
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALA 64
++ A L++L ++ H TVE + +G +K LFLK KK + +A
Sbjct: 98 EVKALLQELGLDIPIVHHDEKATVEEVLDLLHKMGIHAAGTKTLFLKSKKGELVMATAFK 157
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKG 123
T D+K + Q++ K LR A E + E L V G VTPFAL+N R + LL+D+
Sbjct: 158 STPTDLKFI-QKVTNAKD-LRFASSEVLQECLAVVQGCVTPFALINNIEKRPITLLIDRS 215
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+A F ND + + +L K+L+ +G VD A A
Sbjct: 216 LEASTLPLAFCLCRNDYTAVITFEELKKYLEKLGHAYKLVDFGAASA 262
>gi|291517928|emb|CBK73149.1| Uncharacterized conserved protein [Butyrivibrio fibrisolvens 16/4]
Length = 181
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L +L IE+ + +H A T+EA IG + KNL L ++ K FY++ D K
Sbjct: 25 LDNLGIEYERVDHEAAETMEACKAVDEAIGIEMCKNLMLCNRQKTSFYLLLMPGDKKFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E M++ L + GS++ L+N+ DV LL+D+ +
Sbjct: 85 KELSSQINSAR--LSFAEAEDMIKYLDIVPGSLSVMGLINDKNNDVKLLIDEDVLKAKYI 142
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEANPAVGKD 173
HP N S+ + T D +++F+ S D V L VG+D
Sbjct: 143 GCHPCVNTSSLKILTADVIERFIPSTNHDITIVHL-----VGED 181
>gi|225026129|ref|ZP_03715321.1| hypothetical protein EUBHAL_00370 [Eubacterium hallii DSM 3353]
gi|224956566|gb|EEG37775.1| YbaK/proline--tRNA ligase associated domain protein [Eubacterium
hallii DSM 3353]
Length = 172
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSA 62
+K + LK+ I EH AV + A+ +KNLF++D KK FY+++
Sbjct: 11 NKQDIYNYLKENNIWHEITEHKAVYNMAELAEVDTPYPEADAKNLFVRDDKKKNFYLITV 70
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +V++K R G L A E +++I+ + G+VTP ++N++ + V LDK
Sbjct: 71 RGDKRVNLKEF--RKANGTRPLSFASAENLMDIMGLIPGAVTPLGILNDTEKKVHFYLDK 128
Query: 123 GFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
F + HP N ++ L T DL + ++ D V L+
Sbjct: 129 HFLEEPGLVGVHPNDNTATVWLKTEDLIRIIEEHEHDVTLVSLD 172
>gi|315222083|ref|ZP_07863993.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Streptococcus anginosus F0211]
gi|315188833|gb|EFU22538.1| YbaK/prolyl-tRNA synthetase-associated domain protein
[Streptococcus anginosus F0211]
Length = 162
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 4 SKDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVS 61
+K+ ++ L D L+I + + +H + +V A+ + G KNLFLK+KK R FY+V
Sbjct: 2 TKESMIYHLLDELKISYVRLDHEPIFSVIEAAEKGVVLPGQQVKNLFLKNKKGRQFYLVI 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ D+K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D
Sbjct: 62 LRDEKTADIKHLAE--ILDEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVD 119
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ FHP N ++++ D +FL+
Sbjct: 120 EEVDPNLTVGFHPFVNTTTLNIAYADFLRFLE 151
>gi|152995163|ref|YP_001339998.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Marinomonas sp. MWYL1]
gi|150836087|gb|ABR70063.1| YbaK/prolyl-tRNA synthetase associated region [Marinomonas sp.
MWYL1]
Length = 158
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I + +++H V T E +I G +KNLFL+D+K + + + ++D K VD+
Sbjct: 7 LNGLSISYEKFDHAPVYTCEEANLINTHISGAKTKNLFLRDRKGKRHFLVVVSDEKQVDL 66
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
LS L + + L A E + + L GSV+ ++N+ V L++D+ E
Sbjct: 67 NFLSDCLDVKQ--LNFASPERLDKYLDTKPGSVSILGVINDPDGFVELIVDQDIWQSEAL 124
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGR 157
HPL N ++ + +D++ + +GR
Sbjct: 125 QCHPLVNTSTLVIKLSDIETLFEHLGR 151
>gi|406671967|ref|ZP_11079203.1| hypothetical protein HMPREF9706_01463 [Facklamia hominis CCUG
36813]
gi|405579854|gb|EKB53944.1| hypothetical protein HMPREF9706_01463 [Facklamia hominis CCUG
36813]
Length = 163
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 3 YSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVS 61
Y K + LK+ I + EHPAV +EA + +KNLF++D K R +Y+++
Sbjct: 2 YDKQAIYDLLKEKGIWYDVVEHPAVFDMEALGELDLPHAEYNAKNLFVRDDKKRNYYLIT 61
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
+ +VD+K ++ + L A E M +L + GSV+P L+N+ V LD
Sbjct: 62 VRGEKRVDLKDFRKKQETRR--LSFASPEDMEALLGLTPGSVSPLGLLNDREHRVHYYLD 119
Query: 122 KGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ +E HP N SI L DL ++ G + V++
Sbjct: 120 QDLAGEEALVGMHPNENTASIWLKPADLIALIQEHGNEVTVVEI 163
>gi|416999109|ref|ZP_11939778.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
parvula ACS-068-V-Sch12]
gi|333977262|gb|EGL78121.1| YbaK/proline--tRNA ligase associated domain protein [Veillonella
parvula ACS-068-V-Sch12]
Length = 161
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +ILK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILKIKPGHVSPFCLLHDEDRKVHYYIDADYK-NNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L +L K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKELVKLIEEHGTTIEYI 159
>gi|164686576|ref|ZP_02210604.1| hypothetical protein CLOBAR_00145 [Clostridium bartlettii DSM
16795]
gi|164604381|gb|EDQ97846.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
bartlettii DSM 16795]
Length = 162
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ L D I EH AV + ++ +KN+F++D K R +Y+++
Sbjct: 2 NKQEIYKFLNDKNIWHEITEHKAVFNMAELSEINIPYPEADAKNIFVRDDKKRNYYLITV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D KVD+K R L A E +++I+ + GSVTP ++N+ V L +DK
Sbjct: 62 KGDKKVDLKEF--RKNNNTRALSFASENDLMDIMNLIPGSVTPLGMLNDKEMKVKLFIDK 119
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
F ++ + HP N ++ L DL +K G + V++
Sbjct: 120 EFIESSGKIGVHPNDNTATVWLKIEDLINIIKEHGNEVEIVEI 162
>gi|393783028|ref|ZP_10371207.1| hypothetical protein HMPREF1071_02075 [Bacteroides salyersiae
CL02T12C01]
gi|392670953|gb|EIY64430.1| hypothetical protein HMPREF1071_02075 [Bacteroides salyersiae
CL02T12C01]
Length = 162
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
K ++ L L I+++ EH +MT+E + KNLFL +K+ ++++
Sbjct: 2 KPEIYHTLDKLGIDYTSLEHSPIMTMEEGTMIAQKLNVTPCKNLFLVNKQKEYFLLLLSE 61
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+ K+ K +++++ L A +E M +L G+V+ L+ ++ V LL+DK
Sbjct: 62 NKKLSAKSIAKQID--SSHLSFASDEDMKRLLSTTPGAVSILGLIYDNTNKVKLLIDKEI 119
Query: 125 KAQERCFFHPLSNDMSISLNTND-LDKFLKSIGR 157
+ HP N S+ L T D LD FL +IG
Sbjct: 120 MRTDYIGCHPCENTYSLKLKTKDILDIFLPAIGH 153
>gi|294791696|ref|ZP_06756844.1| putative DNA-binding protein [Veillonella sp. 6_1_27]
gi|294456926|gb|EFG25288.1| putative DNA-binding protein [Veillonella sp. 6_1_27]
Length = 161
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +ILK+ G V+PF L+++ R V +D +K
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILKIKPGHVSPFCLLHDEDRKVHYYIDADYK-NNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L +L K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKELVKLIEEHGTTIKYI 159
>gi|312868867|ref|ZP_07729053.1| YbaK/proline--tRNA ligase associated domain protein [Lactobacillus
oris PB013-T2-3]
gi|311095607|gb|EFQ53865.1| YbaK/proline--tRNA ligase associated domain protein [Lactobacillus
oris PB013-T2-3]
Length = 159
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++ L+ +++ HP V T + +YV +KNLFL+ ++ FY+V +
Sbjct: 5 VIEELRRAGVQYQLLNHPPVYTAQEADRYVQGHQFARTKNLFLRARQE-FYLVIVDEKKR 63
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+D++ L ++L + L+ A E + E L + G+V+P L+N DV +++D+ Q
Sbjct: 64 LDLRALRKQLHSAR--LQFATAEQLRERLGITPGAVSPLNLINNPNHDVRVVMDQTIAEQ 121
Query: 128 ERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER HP +N ++ L L LK G + +DL
Sbjct: 122 ERLIGCHPNTNRQTVILALPALMALLKRWGNEVTILDL 159
>gi|392988670|ref|YP_006487263.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Enterococcus hirae ATCC 9790]
gi|392336090|gb|AFM70372.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus hirae
ATCC 9790]
Length = 161
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 1 MAYSKDQLLARLKDLQ-IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFY 58
M ++ ++ +L DL I + + +HP + +V+ + G KNL LK KK + Y
Sbjct: 1 MVFATEKEAYQLLDLLGIPYQKVDHPPITSVK---NLPFTLPGPQVKNLVLKAKKGKQIY 57
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V + + ++K L+++L + L EE +L++L V G+VTPFAL+++ + + +
Sbjct: 58 LVILPDEKQANLKQLAEQLN--EKRLSFLSEEQLLDLLGVAPGTVTPFALMHDQEKAIQV 115
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++D FHP N ++ L+ D K L+ + P Y DL
Sbjct: 116 VIDSAIDQTSTVGFHPNVNTTTLILSFLDFIKILEYLEHPPIYEDL 161
>gi|365118625|ref|ZP_09337137.1| hypothetical protein HMPREF1033_00483 [Tannerella sp.
6_1_58FAA_CT1]
gi|363649342|gb|EHL88458.1| hypothetical protein HMPREF1033_00483 [Tannerella sp.
6_1_58FAA_CT1]
Length = 158
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDMKVLS 74
+I F EH AV + + ++KNLFL+D KKH +Y+++ ++ ++D+K +
Sbjct: 10 KIGFEITEHKAVYNMVELSDISLPYPEVIAKNLFLRDDKKHNYYLITVKSNKRIDLKAIK 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF-FH 133
+ G L +A EE + IL + G+VTPF ++N+ LD+ F A H
Sbjct: 70 R--NYGTRPLSLAKEEELRNILGLTPGTVTPFGILNDKECKTLFFLDEDFLASPAIIGIH 127
Query: 134 PLSNDMSISLNTNDLDKFLKSIG 156
P N ++ L DL ++ G
Sbjct: 128 PNDNTSTVWLKVEDLLHIIEKHG 150
>gi|358063476|ref|ZP_09150087.1| hypothetical protein HMPREF9473_02149 [Clostridium hathewayi
WAL-18680]
gi|356698269|gb|EHI59818.1| hypothetical protein HMPREF9473_02149 [Clostridium hathewayi
WAL-18680]
Length = 189
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L I + + +H T+EA +G + KNLFL + +K FY++ K
Sbjct: 31 LDQLNISYQRIDHDVTNTIEACHDIDRLLGIEICKNLFLCNAQKTSFYLLMMPGGKKFKT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG-FKAQER 129
LS+++G + L A E M + L + GSV+ L+N++ R V LL+D+ QE
Sbjct: 91 AALSKQIGSAR--LSFAGPEFMEKYLDITPGSVSVLGLMNDTGRQVRLLIDEDVINHQEY 148
Query: 130 CFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ +NT D L KFL + V+L
Sbjct: 149 IGCHPCINTSSLKINTQDILTKFLPYVNHPYTLVNL 184
>gi|336053772|ref|YP_004562059.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus kefiranofaciens ZW3]
gi|333957149|gb|AEG39957.1| YbaK/prolyl-tRNA synthetase associated region [Lactobacillus
kefiranofaciens ZW3]
Length = 162
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL-AD 65
++L L + I + HPAV T E +++ + KNLF+K + + Y + L D
Sbjct: 5 EILQLLDEHNITYRLLSHPAVFTSEEADQHLKDKDFAKCKNLFIKTRNSKHYYLLMLPED 64
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K+D + + L L E + E L++ G V+PF+L+N++ + L++D+
Sbjct: 65 KKIDWQ--KTKAELHSSSLTFVSETELEEKLQIKSGLVSPFSLLNDTTNTIPLIVDQAAM 122
Query: 126 AQERCF-FHPLSNDMSISLNTNDLDKFLKSIGR 157
+ HP N +ISL+ +L + L S G
Sbjct: 123 EESNLVGVHPNDNTQTISLSWTELARILSSTGH 155
>gi|417886708|ref|ZP_12530852.1| YbaK/proline--tRNA ligase associated domain protein [Lactobacillus
oris F0423]
gi|341593099|gb|EGS35956.1| YbaK/proline--tRNA ligase associated domain protein [Lactobacillus
oris F0423]
Length = 159
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 8 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK 67
++ L+ +++ HP V T + +YV +KNLFL+ ++ FY+V +
Sbjct: 5 VIEELRRAGVQYQLLNHPPVYTAQEADRYVQGHQFARTKNLFLRARQE-FYLVIVDEKKR 63
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+D++ L ++L + L+ A E + E L + G+V+P L+N DV +++D+ Q
Sbjct: 64 LDLRALRKQLHSTR--LQFATAEQLRERLGITPGAVSPLNLINNPNHDVRVVMDRTIAEQ 121
Query: 128 ERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER HP +N ++ L L LK G + +DL
Sbjct: 122 ERLIGCHPNTNRQTVILALPALMALLKRWGNEVTILDL 159
>gi|343524906|ref|ZP_08761862.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343396778|gb|EGV09314.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 69
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 96 LKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+ +P G V+PF L+N + +D+ + DK +++R FHP +N+ ++ LNT DL KFL++I
Sbjct: 1 MMLPAGVVSPFGLLNNADKDIQVYFDKEIMSEKRMSFHPNTNEKTLFLNTTDLLKFLEAI 60
Query: 156 GRDPAYVDL 164
G +P ++L
Sbjct: 61 GYEPHIIEL 69
>gi|335032030|ref|ZP_08525440.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK52 = DSM 20563]
gi|333768006|gb|EGL45217.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
anginosus SK52 = DSM 20563]
Length = 162
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L +L+I + + +H + +V A+ + G KNLFLK+KK R FY+V + D+
Sbjct: 11 LNELKISYDRLDHEPISSVIEAAEKGIVLPGQQVKNLFLKNKKGRQFYLVILRDEKTADI 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D+
Sbjct: 71 KHLAE--ILDEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVDEEVDPNLTV 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLK 153
FHP N ++++ D +FL+
Sbjct: 129 GFHPFVNTTTLNIAYADFLRFLE 151
>gi|384493536|gb|EIE84027.1| hypothetical protein RO3G_08732 [Rhizopus delemar RA 99-880]
Length = 715
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRF---- 57
S D +L L L I S H V+ +A A+ + N I +K L K K +
Sbjct: 3 SCDAVLETLSKLSISVSPITHEPVLDTKAWAEQLANVSISHQTTKTLIFKPKTAKTAPVT 62
Query: 58 -YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNES-ARD 115
V AL T+ + L ++L L LR A E+ + + GSV+PFAL N + +
Sbjct: 63 PVFVIALDSTETNATALGKKLSLK--DLRFASEDLLKDTFNTKKGSVSPFALSNVTDLAN 120
Query: 116 VALLLDKG-FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
V +++D F+ ++ FHP +D +I ++ +L +L+S+G++ VD
Sbjct: 121 VHIVVDAAAFQTTDKLAFHPTESDKTIFISAQELKTYLESLGKEFVEVDF 170
>gi|398013887|ref|XP_003860135.1| prolyl-tRNA synthetase, putative, partial [Leishmania donovani]
gi|322498354|emb|CBZ33428.1| prolyl-tRNA synthetase, putative, partial [Leishmania donovani]
Length = 361
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADTK 67
A L++L ++ H TVE + +G +K LFLK KK + +A T
Sbjct: 101 ALLQELGLDIPIVHHDEKATVEEVLDLLHKMGIHAAGTKTLFLKSKKGELVMATAFKSTP 160
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE-SARDVALLLDKGFKA 126
D+K + Q++ K LR A E + E L V G VTPFAL+N R + LL+D+ +A
Sbjct: 161 TDLKFI-QKVTNTKD-LRFASSEVLQECLAVVQGCVTPFALINNIEKRPITLLIDRSLEA 218
Query: 127 QERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
F ND + + +L K+L+ +G VD A A
Sbjct: 219 STLPLAFCLCRNDYTAVITFEELKKYLEKLGHAYKLVDFGAASA 262
>gi|339301049|ref|ZP_08650171.1| YbaK/prolyl-tRNA synthetase associated domain protein, partial
[Streptococcus agalactiae ATCC 13813]
gi|319745455|gb|EFV97759.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Streptococcus agalactiae ATCC 13813]
Length = 98
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+DM+ + +G + +RMA +++ + + +P G V+PF L+N +D+ + D+ +
Sbjct: 4 LDMERFKELVGANR--IRMASADSLYQKMLLPSGVVSPFGLINNHDKDILVYFDQEIVKE 61
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER FHP +ND +I + T DL FL+ +G + ++L
Sbjct: 62 ERMSFHPNTNDKTIFIQTTDLFTFLEQLGYEVNIIEL 98
>gi|291521910|emb|CBK80203.1| Uncharacterized conserved protein [Coprococcus catus GD/7]
Length = 183
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L++L I F + +H A+ T++ +G + KNLFL +K +FY++ K
Sbjct: 31 LEELNIPFIRIDHDAMNTIDECQDVDKFLGVEICKNLFLCNSQKTKFYLLMMPGHKKFVT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +++ + L AP E M L + GS + L+N+ V L++D+ Q
Sbjct: 91 RDFCKQINSSR--LSFAPPEYMETYLDLTPGSASILGLMNDHEHHVQLVMDQEVVDQPLI 148
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S++L+TND L+KFL D YV+L
Sbjct: 149 GCHPCINTSSLTLSTNDVLNKFLPYTNHDVLYVNL 183
>gi|333905794|ref|YP_004479665.1| YbaK/prolyl-tRNA synthetases associated domain-containing protein,
partial [Streptococcus parauberis KCTC 11537]
gi|333121059|gb|AEF25993.1| putative YbaK/prolyl-tRNA synthetases associated domain protein
[Streptococcus parauberis KCTC 11537]
Length = 101
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+DM + +G + +RMA +++ E + +P G V+PF L+N D+++ +DK +
Sbjct: 7 LDMDAFKEVVGANR--MRMASSDSLYEKMLLPPGVVSPFGLLNNKDHDISVYIDKEIIPE 64
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
ER FHP +N+ +I L TNDL FL +I ++L
Sbjct: 65 ERMSFHPNTNEKTIFLATNDLLTFLAAIDYPATIIEL 101
>gi|417005944|ref|ZP_11944514.1| putative YbaK/prolyl-tRNA synthetases associated domain
[Streptococcus agalactiae FSL S3-026]
gi|341576125|gb|EGS26536.1| putative YbaK/prolyl-tRNA synthetases associated domain
[Streptococcus agalactiae FSL S3-026]
Length = 93
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 51/86 (59%)
Query: 79 LGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSND 138
+G +RMA +++ + + +P G V+PF L+N +D+ + D+ +ER FHP +ND
Sbjct: 8 VGANRIRMASADSLYQKMLLPSGVVSPFGLINNHDKDILVYFDQEIVKEERMSFHPNTND 67
Query: 139 MSISLNTNDLDKFLKSIGRDPAYVDL 164
+I + T DL FL+ +G + ++L
Sbjct: 68 KTIFIQTTDLFTFLEQLGYEVNIIEL 93
>gi|282601338|ref|ZP_05981422.2| putative DNA-binding protein [Subdoligranulum variabile DSM 15176]
gi|282569421|gb|EFB74956.1| YbaK/proline--tRNA ligase associated domain protein
[Subdoligranulum variabile DSM 15176]
Length = 204
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 23 EHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGK 81
EHPAV +E A+ +KNLF++D K R +Y+++ D +V++K ++ G
Sbjct: 62 EHPAVYNMEELARVALPYPDRDAKNLFVRDDKRRNYYLITVRGDKRVNLKDFRRKQGTKP 121
Query: 82 GGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF-KAQERCFFHPLSNDMS 140
L A E + E+L + G+VTPF L+N+ V +D+ F + HP N +
Sbjct: 122 --LTFASPEELQELLGLIPGAVTPFGLLNDRDCRVHFYIDRDFWQGSGLIGVHPNDNTAT 179
Query: 141 ISLNTNDLDKFLKSIGRDPAYVDLE 165
+ L DL L++ G V+L+
Sbjct: 180 VWLQAEDLVGLLRAHGTAVDIVELD 204
>gi|343525484|ref|ZP_08762439.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343395754|gb|EGV08292.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 162
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+++++ L DL I + + +H + +V A+ + G KNL LK KK R FY+V
Sbjct: 3 NEEKIYQVLDDLHIAYERLDHEPISSVIEAAEKGIVLPGQQVKNLVLKSKKGRQFYLVIL 62
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ + ++K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D+
Sbjct: 63 RDEKRANIKHLAE--VLDEKRLSFANDKELEELLQVESGAVTPFGLLFDKEKKVQLIVDE 120
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
FHP N ++++ +D + L+ G + V+
Sbjct: 121 EVDPSLTVGFHPFVNSTTLNIAYSDFLRLLEKTGHEVKRVN 161
>gi|352517221|ref|YP_004886538.1| hypothetical protein TEH_10470 [Tetragenococcus halophilus NBRC
12172]
gi|348601328|dbj|BAK94374.1| hypothetical protein TEH_10470 [Tetragenococcus halophilus NBRC
12172]
Length = 150
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 15 LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD---KKHRFYIVSALADTKVDMK 71
+ I+F + EHPAV T+E ++KNLFL++ K+H Y++ D +D+K
Sbjct: 1 MNIDFKRIEHPAVYTIEEMKALDFPAHSTVAKNLFLRNGNGKEH--YLLVVEEDQNIDLK 58
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ + + L A EE + + L + G+V+PF L+N+ DV + +D K
Sbjct: 59 EVKTMIASSR--LSFASEERLEKYLGLAKGAVSPFGLLNDKQNDVTVYVDSHLKDANVIG 116
Query: 132 FHPLSNDMSISLNTNDLDKFLK 153
HP N ++ + L +F+K
Sbjct: 117 LHPNDNTATVFITFEQLLQFIK 138
>gi|323144115|ref|ZP_08078755.1| YbaK/proline--tRNA ligase associated domain protein [Succinatimonas
hippei YIT 12066]
gi|322416130|gb|EFY06824.1| YbaK/proline--tRNA ligase associated domain protein [Succinatimonas
hippei YIT 12066]
Length = 171
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K + LK I+ EH A+ +++ A V +KNLF++D K R +Y+++
Sbjct: 2 NKQNIYDLLKAKNIKHEITEHCALFSMKDTADVVFPYPEAEAKNLFVRDDKKRNYYLITV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +VD+K ++ GL L A + + L++ GSV+PF L+N+ + V +D+
Sbjct: 62 RGDKRVDLKAFRKKFGL--RALSFASTADLEDKLQLIPGSVSPFGLLNDKSCSVIWYVDE 119
Query: 123 GFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
F HP N ++ + DL + +++ G ++L
Sbjct: 120 EFTTVSHMIGIHPNDNTATVWFDPQDLIQIIRTHGNTIEMINL 162
>gi|418965474|ref|ZP_13517245.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. constellatus SK53]
gi|423069389|ref|ZP_17058176.1| hypothetical protein HMPREF9682_01397 [Streptococcus intermedius
F0395]
gi|355364829|gb|EHG12557.1| hypothetical protein HMPREF9682_01397 [Streptococcus intermedius
F0395]
gi|383342292|gb|EID20513.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
constellatus subsp. constellatus SK53]
Length = 162
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+++++ L DL I + + +H + +V A+ + G KNL LK KK R FY+V
Sbjct: 3 NEEKIYQVLDDLHIAYERLDHEPISSVIEAAEKGIVLPGQQVKNLVLKSKKGRQFYLVIL 62
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ + ++K L++ L + L A ++ + E+L+V G+VTPF L+ + + V L++D+
Sbjct: 63 RDEKRANIKHLAE--VLDEKRLSFANDKELEELLQVEPGAVTPFGLLFDKEKKVQLIVDE 120
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
FHP N ++++ +D + L+ G + V+
Sbjct: 121 EVDPSLTVGFHPFVNSTTLNIAYSDFLRLLEKTGHEVKRVN 161
>gi|261338680|ref|ZP_05966564.1| putative DNA-binding protein [Bifidobacterium gallicum DSM 20093]
gi|270276305|gb|EFA22159.1| putative DNA-binding protein [Bifidobacterium gallicum DSM 20093]
Length = 179
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 2 AYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIV 60
A + D ++ L I H V T A + NLFLKD K +++V
Sbjct: 13 ALACDCIVTMLNQRHIVHEIIAHAPVTTARAAQSLALPYPEAQAVNLFLKDGAKAHYFLV 72
Query: 61 SALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
A A T VD+K L R L L A + + E+L + G+VTP + ++ +++
Sbjct: 73 VAHAGTHVDLKCL--RTALHSARLSFAKPQELQEVLGLEPGAVTPLGTLADTDHRTDVVI 130
Query: 121 DKGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
D+ F Q R HP +N ++ L T+DL L G ++D+ + P
Sbjct: 131 DQSF--QHRLIGVHPCTNAATLYLCTDDLVHVLAEHGVHTIFLDMSSKPC 178
>gi|260439115|ref|ZP_05792931.1| putative YbaK/prolyl-tRNA synthetase domain protein [Butyrivibrio
crossotus DSM 2876]
gi|292808428|gb|EFF67633.1| putative YbaK/prolyl-tRNA synthetase domain protein [Butyrivibrio
crossotus DSM 2876]
Length = 183
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG-LSKNLFL-KDKKHRFYIVSALADTKVD 69
L L IE+ + +H T+EA + + + KNLFL +K RFY+++ D K
Sbjct: 25 LDKLGIEYERVDHEPAETMEACIEIDRTLAPAVICKNLFLCNSQKTRFYLLAMRGDKKFM 84
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K +S ++ + L A + M + L + GSV+ L+N++ +V LL+D+ +E
Sbjct: 85 TKEISHQINSPR--LSFATPDFMEKFLDITPGSVSVLGLMNDTGNNVQLLVDEDVLKEEY 142
Query: 130 CFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEAN 167
HP N S+ + T D+ KF+K++ D V L N
Sbjct: 143 FGCHPCINTSSLKMRTEDVFGKFMKAVNHDYMVVKLGKN 181
>gi|402570989|ref|YP_006620332.1| hypothetical protein Desmer_0411 [Desulfosporosinus meridiei DSM
13257]
gi|402252186|gb|AFQ42461.1| hypothetical protein Desmer_0411 [Desulfosporosinus meridiei DSM
13257]
Length = 183
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVD 69
+L L I + + +H ++EA + +G + KNLFL + +K RFY++ K
Sbjct: 30 QLDKLGISYFRLDHEETPSIEACDEIEKLLGIEICKNLFLCNTQKTRFYLLMMPGRKKFR 89
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K LS+++ + L A + M + L + GSV+ L+N+ + V LL+DK E
Sbjct: 90 TKDLSRQINSSR--LSFAEADDMEKYLNIVPGSVSVLGLMNDVNKCVTLLIDKDVLRDEF 147
Query: 130 CFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T D L KFL G +P V+L
Sbjct: 148 LGCHPCVNTSSLKIKTADLLSKFLPYTGHEPTLVEL 183
>gi|406026773|ref|YP_006725605.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Lactobacillus buchneri CD034]
gi|405125262|gb|AFS00023.1| YbaK/prolyl-tRNA synthetase associated domain protein
[Lactobacillus buchneri CD034]
Length = 166
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L + I + EHPA T E +++ G +K +F+ +KK FY++ ++D
Sbjct: 11 LDKMGIPYEIVEHPAAHTTEEADEFIKGKEGVRTKTMFMTNKKKTEFYLLVMDDAKRLDF 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
Q L K ++MA E++ E + + G V+ F L+N +++ + D+ ++
Sbjct: 71 HEF-QDLTNTKQ-IKMASAESLKEQMGLEPGIVSIFGLINNQEKNIHVYFDRAILDEKTM 128
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEA 166
FHP N +I + + D+ KF+K +G D +DLE+
Sbjct: 129 TFHPNVNTRTIFVASKDVLKFVKEMGYDYQILDLES 164
>gi|339624778|ref|ZP_08660567.1| YbaK/prolyl-tRNA synthetase associated region [Fructobacillus
fructosus KCTC 3544]
Length = 166
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 46 KNLFLKDKKH-RFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVT 104
KNL ++ KK +FY+ + + ++D L++ LG K LR A EE + +++ V G+VT
Sbjct: 44 KNLLIRTKKTAQFYLYMTMQE-RIDFGRLAKALGSTKSQLRFASEEELFDLMAVHPGTVT 102
Query: 105 PFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
P AL + + + L++D+ ++ HP N+ ++ + + K L +G + Y L
Sbjct: 103 PLALEKDKDKKIHLVIDQAIIDADQVAVHPNQNEATVVMTWAEFTKVLDELGEE--YQVL 160
Query: 165 EANPAV 170
+PAV
Sbjct: 161 TDSPAV 166
>gi|229000945|ref|ZP_04160405.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock3-17]
gi|229008796|ref|ZP_04166184.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock1-4]
gi|228752468|gb|EEM02108.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock1-4]
gi|228758803|gb|EEM07887.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock3-17]
Length = 159
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVG--NIGGGLSKNLFLKDKKHRFYIVSAL 63
+Q++ L++ I +SQYEH ++ + K N+ G SK+LFLKDK Y++ +
Sbjct: 5 NQVIQLLEEADIPYSQYEHEPILNYDTDRKIRERFNLEGVPSKSLFLKDKSGNNYVLVTI 64
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
K+D K++ + G + + EE ++E G V PF E + L++D+
Sbjct: 65 EGEKLDSKLMKELTG---KRISICSEEELIEKTSCVPGCVAPFGYQEE----ITLVIDRK 117
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+ P +++I ++T D+DK L
Sbjct: 118 IYNYNKFLLSPGVPELTIEIHTKDIDKIL 146
>gi|401419290|ref|XP_003874135.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490369|emb|CBZ25629.1| putative bifunctional aminoacyl-tRNA synthetase [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 727
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
D++ L +L ++ H TVE + +G +K LFLK KK + +AL
Sbjct: 10 DEVKGFLHELGLDIPIVHHDEKATVEEVLDILQKMGIDAAGTKTLFLKSKKGELVMATAL 69
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALV-NESARDVALLLDK 122
T D+K + Q++ K LR A E + E L V G VTPF L+ N+ R + LL+D+
Sbjct: 70 KSTPTDLKFI-QKVTNTKD-LRFASNEVLQECLAVVQGCVTPFPLINNKDNRPITLLMDR 127
Query: 123 GFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+ + F ND + + +L K+L+ +G VD A A
Sbjct: 128 SLEGSAQPLAFCLCRNDYTAVITFEELKKYLEKLGYAYKLVDFGAASA 175
>gi|282849068|ref|ZP_06258457.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Veillonella
parvula ATCC 17745]
gi|282581343|gb|EFB86737.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Veillonella
parvula ATCC 17745]
Length = 161
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + ILK+ G V+PF L+++ R V +D ++
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWNILKIKPGHVSPFCLLHDEERKVHYYIDADYE-NNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP ND ++ L +L K ++ G Y+ L
Sbjct: 128 GIHPNQNDATVWLQGKELVKLIEEHGTIVEYITL 161
>gi|367069149|gb|AEX13398.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069151|gb|AEX13399.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069153|gb|AEX13400.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069155|gb|AEX13401.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069157|gb|AEX13402.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069159|gb|AEX13403.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069161|gb|AEX13404.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069163|gb|AEX13405.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069165|gb|AEX13406.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069167|gb|AEX13407.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069169|gb|AEX13408.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069171|gb|AEX13409.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069173|gb|AEX13410.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069175|gb|AEX13411.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069177|gb|AEX13412.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069179|gb|AEX13413.1| hypothetical protein UMN_1603_02 [Pinus taeda]
gi|367069181|gb|AEX13414.1| hypothetical protein UMN_1603_02 [Pinus radiata]
gi|367069183|gb|AEX13415.1| hypothetical protein UMN_1603_02 [Pinus lambertiana]
Length = 78
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 243 SFTDAEKFVEEILDRISAKLLSETKEGNIAQQGQELGNEIANRLRKCCYPELKNLATIFK 302
+ TD + V ILD+ +A +LSE I Q G++LG +A +RK P++++L +FK
Sbjct: 1 AVTDVRELVNCILDKTTAAVLSEITGDAIEQHGKDLGPIVAGAVRKRLVPDMESLIMLFK 60
Query: 303 NTAYTQGFHAGKAS 316
N AYTQGF + S
Sbjct: 61 NAAYTQGFTSAIGS 74
>gi|373107586|ref|ZP_09521882.1| hypothetical protein HMPREF9623_01546 [Stomatobaculum longum]
gi|371650782|gb|EHO16225.1| hypothetical protein HMPREF9623_01546 [Stomatobaculum longum]
Length = 180
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L L I + + +H T+E A + + KNLFL +++ FY++ D
Sbjct: 25 LDRLDIPYVRVDHAPAETMEVCADIDTVLNCRICKNLFLCNRQQSAFYLLMMPGDKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L AP E M+E L + GSV+ L+N+S V LL+D+ E
Sbjct: 85 KELSAQIGSAR--LSFAPPEKMIEYLGLYPGSVSVMGLMNDSEHRVQLLVDQDLFRDEYI 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEA 166
HP N S+ L D+ + FL ++ + V+L
Sbjct: 143 GCHPCVNTSSLKLRRTDIFETFLTAVKHNYLSVELHG 179
>gi|167376151|ref|XP_001733883.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904849|gb|EDR29985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 163
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ A L + +I++ EH AV ++ + +KNLF++D K R +Y++S
Sbjct: 2 NKAEVYAYLDEHKIQYEVTEHKAVFNMKEISDIKLPYPNSEAKNLFIRDDKKRNYYLLSV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D VD+K R L A + +L L + G+V+P ++N+ R V + +DK
Sbjct: 62 HGDKHVDLKKF--RKDNNTRQLSFASDSDLLNTLGLISGAVSPLGILNDKERKVQVFIDK 119
Query: 123 GF--KAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
F A HP N +I L NDL +KS
Sbjct: 120 EFLNSADGLIGVHPNDNTATIWLKVNDLIDIIKS 153
>gi|167393050|ref|XP_001740406.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895509|gb|EDR23180.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 163
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ A L + +I++ EH AV ++ + +KNLF++D K R +Y++S
Sbjct: 2 NKAEVYAYLDEHKIQYEVTEHKAVFNMKEISDIKLPYPNSEAKNLFIRDDKKRSYYLLSV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D VD+K R L A + +L L + G+V+P ++N+ R V + +DK
Sbjct: 62 HGDKHVDLKKF--RKDNNTRQLSFASDSDLLNTLGLISGAVSPLGILNDKERKVQVFIDK 119
Query: 123 GF--KAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
F A HP N +I L NDL +KS
Sbjct: 120 EFLNSADGLIGVHPNDNTATIWLKVNDLIDIIKS 153
>gi|169351129|ref|ZP_02868067.1| hypothetical protein CLOSPI_01908 [Clostridium spiroforme DSM 1552]
gi|169292191|gb|EDS74324.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
spiroforme DSM 1552]
Length = 163
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSAL 63
K+Q+ L + I++ EH AV +E +KNLF++D KK +Y+++
Sbjct: 3 KNQIYEYLNNNNIKYEISEHIAVYNMEEAYDIKLPYPNASAKNLFIRDNKKQNYYLLTVK 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D KV++K Q L A ++ ++ I+K+ G+VTP ++N+ V +D+
Sbjct: 63 GDKKVNLKEFKQ--NNHTRSLSFASKDDLMSIMKLIPGAVTPLGILNDHDCKVHCFIDEA 120
Query: 124 FKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIG 156
F HP N +I L NDL LK+ G
Sbjct: 121 FFETPGLIGVHPNDNRTTIFLKINDLINILKAHG 154
>gi|291549798|emb|CBL26060.1| Uncharacterized conserved protein [Ruminococcus torques L2-14]
Length = 186
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG--LSKNLFLKDKKHR-FYIVSALADTKV 68
L L +E+ + +H A MT+EA + +G G + KNLFL +++ FY++ D
Sbjct: 25 LDKLGVEYQRVDHEAAMTMEACEEIDRTLGDGTAICKNLFLCNRQETDFYLLLMPGDKPF 84
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K LS ++G + L A E M + L + GSV+ L+N++ V LL+D+
Sbjct: 85 KTKNLSAQIGSAR--LSFAKPEYMEKYLDITPGSVSVMGLMNDTEGKVQLLIDEDVMKDP 142
Query: 129 RCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEANPAVGKDQ 174
HP N S+ + T+DL K + ++ P V L P V + Q
Sbjct: 143 YFGCHPCINTSSLKIRTSDLIAKIIPALKHAPKMVKL---PGVEEQQ 186
>gi|389578021|ref|ZP_10168049.1| hypothetical protein EubceDRAFT1_2737 [Eubacterium cellulosolvens
6]
gi|389313506|gb|EIM58439.1| hypothetical protein EubceDRAFT1_2737 [Eubacterium cellulosolvens
6]
Length = 181
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H T+EA + +G + KNLFL ++ K FY++ K
Sbjct: 25 LDSLGIEYVRTDHKRTDTMEACNEIDAILGVVICKNLFLCNRQKTAFYLLMMPGGKKFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E ML+ L + GSV+ L+N+ + V LL+D+ E
Sbjct: 85 KELSAQINSSR--LSFATPEDMLKYLDIQPGSVSIMGLMNDKEQAVQLLIDEDVLKDEYL 142
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEANPAVGKD 173
HP N S+ + T+D + KFL ++G V L VG+D
Sbjct: 143 GCHPCVNTSSLKIRTDDVIQKFLPAVGHGYQTVKL-----VGED 181
>gi|323342707|ref|ZP_08082939.1| YbaK/prolyl-tRNA synthetase associated region [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|336066491|ref|YP_004561349.1| YbaK/prolyl-tRNA synthetase-associated domain-containing protein
[Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463819|gb|EFY09013.1| YbaK/prolyl-tRNA synthetase associated region [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|334296437|dbj|BAK32308.1| YbaK/prolyl-tRNA synthetase-associated domain-containing protein
[Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 165
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKK-HRFYIVSAL 63
++++ L +L I + + H + +VE+ +I G K L L+ KK +Y+V A
Sbjct: 7 QEEIYHLLHELDISYREDHHKPIFSVESDDL---DIPGPQVKYLLLQPKKTDEYYLVVAH 63
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+T D+K L+Q LG + L E M ++L + GS+T +L+ ++ V + D
Sbjct: 64 DETHPDLKQLAQDLGTKR--LSFPSNEAMKDLLGIEFGSLTLLSLIADTDHKVTPIFDTA 121
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ +N ++++L D++K+L+ +G P Y++L
Sbjct: 122 IDRDDTIGLLANNNTITLTLQVRDVEKYLEHLGYTPRYLEL 162
>gi|325261676|ref|ZP_08128414.1| putative YbaK/prolyl-tRNA synthetase domain protein [Clostridium
sp. D5]
gi|324033130|gb|EGB94407.1| putative YbaK/prolyl-tRNA synthetase domain protein [Clostridium
sp. D5]
Length = 191
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L+I + +H T+EA +G KNLFL+++ K F+++ + K
Sbjct: 39 LDQLKIPYDGVDHDVAPTIEACRAVEEELGILPCKNLFLRNRQKTTFFLLLMPGEKKFFT 98
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS +LG+ + L A E M + L + GSV+ L+N+ V LL+DK E
Sbjct: 99 KDLSAQLGISR--LSFAEPEYMEQYLDLSPGSVSVLGLMNDKDWYVDLLIDKELLNNEYM 156
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T+D L KFLK G V L
Sbjct: 157 GCHPCMNTTSLKIKTDDILKKFLKHTGHRYRVVSL 191
>gi|160932877|ref|ZP_02080266.1| hypothetical protein CLOLEP_01718 [Clostridium leptum DSM 753]
gi|156867951|gb|EDO61323.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
leptum DSM 753]
Length = 178
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ + LK+ I EH AV + A+ +KNLF++D K R +Y+++
Sbjct: 18 NKQEIYSFLKEKNIWHEITEHKAVYNMAELAEIEIPYPAADAKNLFVRDDKKRNYYLITV 77
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +V +K R L A EE ++++L + GSVTP ++N+ R V + LD+
Sbjct: 78 KGDKRVALKEF--RKANQTRPLSFASEEDLMKLLGLTAGSVTPLGVLNDEERKVTVFLDR 135
Query: 123 GFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIG 156
F + HP N ++ L DL + + G
Sbjct: 136 DFFEESGLIGVHPNDNTATVWLKAEDLVRLIGEHG 170
>gi|291525644|emb|CBK91231.1| Uncharacterized conserved protein [Eubacterium rectale DSM 17629]
gi|291528250|emb|CBK93836.1| Uncharacterized conserved protein [Eubacterium rectale M104/1]
Length = 181
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H A T+E + +G + KNLFL ++ K FY++ D
Sbjct: 25 LDKLGIEYQRIDHEAAFTMEVCEEIDKTLGATICKNLFLCNRQKTDFYLLMIPGDKTFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L A + M + L + GSV+ L+N+ V LL+D+ E
Sbjct: 85 KELSHQIGSAR--LSFASPQDMEKYLDITPGSVSVMGLMNDHDNAVRLLVDEDVLKGEWV 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + T D+ +K++ D V L
Sbjct: 143 GCHPCINTSSLRIKTKDMFGPVIKAMHHDMTVVKL 177
>gi|226323756|ref|ZP_03799274.1| hypothetical protein COPCOM_01531 [Coprococcus comes ATCC 27758]
gi|225207940|gb|EEG90294.1| YbaK/proline--tRNA ligase associated domain protein [Coprococcus
comes ATCC 27758]
Length = 195
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L L + + + +H A MT+EA + + + KNL L +++ +FY++ D
Sbjct: 43 LDSLGVVYQRIDHEAAMTMEACEEIDRTLEATICKNLLLCNRQETQFYLLMLPGDKVFKT 102
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L A E M + L + GS++ L+N+ R V LL+D+ E
Sbjct: 103 KDLSAQIGSSR--LSFAKVEYMEQYLDITPGSLSVLGLMNDKDRMVRLLIDEDVLTGEYI 160
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ L T DL +K + ++ +P V L
Sbjct: 161 GCHPCINTSSLRLRTKDLVEKIIPAMEHEPTIVKL 195
>gi|429246688|ref|ZP_19209992.1| hypothetical protein CFSAN001628_016704 [Clostridium botulinum
CFSAN001628]
gi|428756270|gb|EKX78838.1| hypothetical protein CFSAN001628_016704 [Clostridium botulinum
CFSAN001628]
Length = 107
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIV 60
M K+++ L +L I++ ++EH AV T+E +I G KNLFL+++K + +
Sbjct: 1 MNKGKEKIYNILDELNIKYIKHEHEAVYTIEEVNNLQLDIEGQHCKNLFLRNRKGNIHYL 60
Query: 61 SALADTKV-DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFAL 108
L D K+ D+K L++ +G L MA EE + + L + GSVTPF L
Sbjct: 61 LILCDEKMADLKALAKE--IGSTPLSMASEERLYKHLGLTPGSVTPFGL 107
>gi|238923541|ref|YP_002937057.1| Bi-functional aminoacyl-tRNA synthetase, putative [Eubacterium
rectale ATCC 33656]
gi|238875216|gb|ACR74923.1| Bi-functional aminoacyl-tRNA synthetase, putative [Eubacterium
rectale ATCC 33656]
Length = 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H A T+E + +G + KNLFL ++ K FY++ D
Sbjct: 25 LDKLGIEYQRIDHEAAFTMEVCEEIDKTLGATICKNLFLCNRQKTDFYLLMIPGDKTFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L A + M + L + GSV+ L+N+ V LL+D+ E
Sbjct: 85 KELSHQIGSAR--LSFASPQDMEKYLDITPGSVSVMGLMNDHDNAVRLLVDEDVLKGEWV 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + T D+ +K++ D V L
Sbjct: 143 GCHPCINTSSLRIKTKDMFGPVIKAMHHDMTVVKL 177
>gi|269797800|ref|YP_003311700.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Veillonella parvula DSM 2008]
gi|269094429|gb|ACZ24420.1| YbaK/prolyl-tRNA synthetase associated region [Veillonella parvula
DSM 2008]
Length = 161
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + ILK+ G V+PF L+++ R V +D ++
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWNILKIKPGHVSPFCLLHDEERKVHYYIDADYE-NNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP ND ++ +L K ++ G Y+ L
Sbjct: 128 GIHPNQNDATVWFQGKELVKLIEEHGTIVEYITL 161
>gi|365844047|ref|ZP_09384916.1| YbaK/proline--tRNA ligase associated domain protein [Flavonifractor
plautii ATCC 29863]
gi|364566505|gb|EHM44191.1| YbaK/proline--tRNA ligase associated domain protein [Flavonifractor
plautii ATCC 29863]
Length = 162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ A L I EH AV + A+ +KNLF++D K R +Y+++
Sbjct: 2 NKQEIYALLSARNIWHEVTEHKAVFNMAEVAEIHLPYPEANAKNLFIRDDKKRNYYLITV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ +VD+K Q+ L A ++ ++++L + G+VTP L+N+ V LDK
Sbjct: 62 KGNKRVDLKAFRQQND--TRPLTFASDQDLMDMLGLIPGAVTPLGLLNDREHKVTFWLDK 119
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
F ++ HP N ++ L T DL + L+ G
Sbjct: 120 SFLESSGLIGVHPNDNTATVWLKTQDLLRLLEENG 154
>gi|339443647|ref|YP_004709652.1| hypothetical protein CXIVA_25810 [Clostridium sp. SY8519]
gi|338903048|dbj|BAK48550.1| hypothetical protein CXIVA_25810 [Clostridium sp. SY8519]
Length = 182
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 12 LKDLQIEFSQYEHP-AVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVD 69
L L IE+ Q +H T+E + + + KNLFL + KK ++Y++ D
Sbjct: 25 LDRLGIEYWQTDHEKEAYTMEDCLEVDAVLEATVCKNLFLCNRKKTQYYLLMMPGDKPFK 84
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K LS + GL + L A E+ MLE+L + G+V+ L+N+ V LL+D+ E
Sbjct: 85 TKELSGQQGLTR--LSFAHEDKMLELLDIHPGAVSVMGLMNDREHQVQLLIDEDVLQGEY 142
Query: 130 CFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + D L+KFL ++ D V L
Sbjct: 143 LGCHPCVNTASLKIRMKDILEKFLPAVEHDYLVVKL 178
>gi|331083319|ref|ZP_08332432.1| hypothetical protein HMPREF0992_01356 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404400|gb|EGG83945.1| hypothetical protein HMPREF0992_01356 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 183
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L+ L+I + Q +H A T+EA + + + KNLFL +++ FY++ + K
Sbjct: 25 LEQLKIPYEQADHEAASTMEACERVDELMQVTMCKNLFLCNRQQTDFYLLLMPGNKKFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++G + L A E M + L + GSV+ L+N+ V LL+D+ E
Sbjct: 85 KDLSKQIGSAR--LSFAGPEFMEKFLNISPGSVSVLGLMNDLENRVQLLVDEEVLEDEFI 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEANP 168
HP N S+ L T DL ++FL ++ + V L NP
Sbjct: 143 GCHPCVNTSSLKLLTKDLTERFLPAVHHEMKIVHL-PNP 180
>gi|295090940|emb|CBK77047.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum
K10]
Length = 188
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L + + + +H T+E + + + KNLFL + +K FY++ + K
Sbjct: 32 LDSLGVSYQRMDHDPTDTIEVCHEVEALLQIRICKNLFLCNAQKTNFYLLLTPGEKKFKT 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ S+++G + L A E M + L + GSV+ L+N++ V L +D+ E
Sbjct: 92 AIFSKQMGCSR--LSFASAEFMEQFLDITPGSVSVLGLMNDTENRVRLAIDRDVLKDEYF 149
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T D LDK L ++G + VDL
Sbjct: 150 GCHPCINTSSLKIRTCDLLDKILPALGHEYTLVDL 184
>gi|290971258|ref|XP_002668435.1| predicted protein [Naegleria gruberi]
gi|284081843|gb|EFC35691.1| predicted protein [Naegleria gruberi]
Length = 224
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 39/174 (22%)
Query: 32 AQAKYVGN--IGGGLSKNLFL---KDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRM 86
+ +YV + + L KN FL K K+++FY V A DT+V+M LS+ LGLG G LR
Sbjct: 44 VEGRYVDSDQVKFKLCKNFFLNHKKKKQNKFYGV-ACTDTQVEMNALSKNLGLGSGNLRF 102
Query: 87 APEETMLEILKVPLGSVTPFAL------VNESARDV----------------------AL 118
A + L + G+VTP A V E DV A
Sbjct: 103 ADSAELTNYLDILPGNVTPLAFHLLHPKVQEKRPDVLVSTEENPSIVSNMKTLTIIVDAK 162
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV-----DLEAN 167
+L K + FHPL N S S++ ++ K++K + A++ D E N
Sbjct: 163 ILRKSKEFTTMLLFHPLHNCASTSMSQDEFIKYMKECLGEDAWMQVIVYDFETN 216
>gi|294793559|ref|ZP_06758696.1| putative DNA-binding protein [Veillonella sp. 3_1_44]
gi|294455129|gb|EFG23501.1| putative DNA-binding protein [Veillonella sp. 3_1_44]
Length = 161
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L+D I+F +H + +++ + +KNLF++D K+ +Y+++ +VD+
Sbjct: 11 LRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLITVRGSKRVDL 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K + L K + EE + +ILK+ G V+PF L+++ V +D ++
Sbjct: 71 KQFRKDHKLKK--ISFGSEEELWDILKIKPGHVSPFCLLHDEDHKVHYYIDADYE-NNLI 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP ND ++ L +L K ++ G Y+
Sbjct: 128 GIHPNQNDATVWLQGKELVKLIEEHGTTIEYI 159
>gi|392553543|ref|ZP_10300680.1| hypothetical protein PspoU_19921 [Pseudoalteromonas spongiae
UST010723-006]
Length = 162
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 14 DLQIEFSQYEHPAVMT-VEAQAKYVGNIGGGLSKNLFLKD---KKHRFYIVSALADTKVD 69
+L I+ + HP + T VEA + G L KNLFL+D K+H I S + +VD
Sbjct: 13 ELAIDCEKISHPPLHTAVEADRLLLERPGTRL-KNLFLRDNYGKRHFLLITSP--NKQVD 69
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
+KVLS+ GL + G A E + + L V G V+ AL+N++ V LL+D +
Sbjct: 70 LKVLSKSQGLSRLG--FASNERLAKYLAVKPGCVSMLALLNDAENAVQLLVDDAIWQSDL 127
Query: 130 CFFHPLSNDMSISLNTNDLDK 150
HP N + + NDL K
Sbjct: 128 FHCHPFDNTQTWLMQKNDLLK 148
>gi|260588958|ref|ZP_05854871.1| putative YbaK/prolyl-tRNA synthetase domain protein [Blautia
hansenii DSM 20583]
gi|260540737|gb|EEX21306.1| putative YbaK/prolyl-tRNA synthetase domain protein [Blautia
hansenii DSM 20583]
Length = 197
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L+ L+I + Q +H A T+EA + + + KNLFL +++ FY++ + K
Sbjct: 39 LEQLKIPYEQADHEAASTMEACERVDELMQVTMCKNLFLCNRQQTDFYLLLMPGNKKFKT 98
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++G + L A E M + L + GSV+ L+N+ V LL+D+ E
Sbjct: 99 KDLSKQIGSAR--LSFAGPEFMEKFLNISPGSVSVLGLMNDLENRVQLLVDEEVLEDEFI 156
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEANP 168
HP N S+ L T DL ++FL ++ + V L NP
Sbjct: 157 GCHPCVNTSSLKLLTKDLTERFLPAVHHEMKIVHL-PNP 194
>gi|374674124|dbj|BAL52015.1| unknown protein [Lactococcus lactis subsp. lactis IO-1]
Length = 163
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L DL+I ++ EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LADLEIPYNIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
L + +G+ + L EE + ++L + G V+ F LV + ++ + D+ ++
Sbjct: 71 NRLGEIIGVKR--LHFVSEERLEDMLGLNSGIVSLFGLVGKHYDNMHIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I + LKS G D +DL
Sbjct: 129 QT---FHPNDNTKTIFFAMDACFTILKSQGYDYQIIDL 163
>gi|295108859|emb|CBL22812.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 183
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGG--GLSKNLFLKDKKH-RFYIVSALADTKV 68
L L + + + +H A MT+EA + +G + KNLFL +++ FY++ D
Sbjct: 25 LDKLSVTYQRVDHEAAMTMEACEEIDRTLGDDTAICKNLFLCNRQETNFYLLLMPGDKPF 84
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K LS ++G + L A E M + L + GSV+ L+N+ V LL+D+
Sbjct: 85 KTKDLSAQIGSAR--LSFAKPEYMEKYLDITPGSVSVLGLMNDHEEKVQLLIDEDVLKDP 142
Query: 129 RCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLE 165
HP N S+ T D +K + ++ +P V+LE
Sbjct: 143 YFGCHPCINTSSLKFTTKDFTEKIIPALEHEPIIVNLE 180
>gi|295093511|emb|CBK82602.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
Length = 180
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L D IE+ + +H T+E ++ +G + KNLFL ++ K +FY++ D
Sbjct: 25 LDDHGIEYWRTDHAPADTMEVCSEIDAVLGATICKNLFLCNRQKTQFYLLMMPGDKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K ++ ++G + L A E M + L + G+V+ L+N+ V LL+D+ E
Sbjct: 85 KEITSQIGSAR--LSFASPEDMEKYLDIRPGAVSVMGLMNDHENYVQLLVDEDVMKGEYL 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + T D+ KFL+++ D V L
Sbjct: 143 GCHPCVNTSSMKVRTEDIFGKFLEAVHHDMIKVTL 177
>gi|373498290|ref|ZP_09588805.1| hypothetical protein HMPREF0402_02678 [Fusobacterium sp. 12_1B]
gi|404367529|ref|ZP_10972892.1| hypothetical protein FUAG_00971 [Fusobacterium ulcerans ATCC 49185]
gi|313688621|gb|EFS25456.1| hypothetical protein FUAG_00971 [Fusobacterium ulcerans ATCC 49185]
gi|371962330|gb|EHO79939.1| hypothetical protein HMPREF0402_02678 [Fusobacterium sp. 12_1B]
Length = 163
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSAL 63
K +L L D I++ EH AV +E ++ +KNLF++D KK +Y+++
Sbjct: 3 KQELYNFLNDKNIQYEVTEHQAVFNMEELSQIDIPYPEADAKNLFVRDDKKKNYYLITVK 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D +V++K R L A E+ + +I+ + G+VTP ++N+ R + + LD
Sbjct: 63 GDKRVNLKEF--RKENQTRPLSFATEDELKKIMHLIPGAVTPLGILNDEERKIKMFLDDY 120
Query: 124 F-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
F K HP N ++ + DL +K G +
Sbjct: 121 FLKGNGLIGVHPNDNTATVWMQAEDLIDIIKEHGNE 156
>gi|332652924|ref|ZP_08418669.1| putative DNA-binding protein [Ruminococcaceae bacterium D16]
gi|332518070|gb|EGJ47673.1| putative DNA-binding protein [Ruminococcaceae bacterium D16]
Length = 170
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K ++ A L I EH AV + A+ +KNLF++D K R +Y+++
Sbjct: 10 NKQEIYALLSARSIWHEVTEHKAVYNMAEVAEIHLPYPEADAKNLFIRDDKKRNYYLITV 69
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D + D+K R L A ++ +++IL + G+VTP L+N+ V LDK
Sbjct: 70 KGDKRADLKAF--RHQNDTRPLTFASDQDLMDILGLIPGAVTPLGLLNDREHKVTFWLDK 127
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
F + HP N ++ L T DL + L+ G
Sbjct: 128 SFLEGSGLIGVHPNDNTATVWLKTQDLLRLLEENG 162
>gi|407789927|ref|ZP_11137025.1| Ala-tRNA(Pro) hydrolase [Gallaecimonas xiamenensis 3-C-1]
gi|407205749|gb|EKE75717.1| Ala-tRNA(Pro) hydrolase [Gallaecimonas xiamenensis 3-C-1]
Length = 159
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYI-VSALADTKV 68
A L L I F++ EHP + +A ++ G KNLFL+D R +I + D +V
Sbjct: 3 ALLSRLGIAFNKVEHPPLPDCQAADRFGLARPGQRIKNLFLRDNYGRQHILLLTTPDKQV 62
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D+K LS++ GL + G A E + L V G+V+ AL VAL +D+ +
Sbjct: 63 DLKALSRQSGLSRLG--FASAERLERYLGVAPGAVSLLALAQAPQGTVALWIDEALWQGQ 120
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
HPL + ++ + +++F +G P
Sbjct: 121 DFQCHPLVSHQTLVIPKTGVERFCDHLGIIP 151
>gi|404484180|ref|ZP_11019394.1| hypothetical protein HMPREF1135_02454 [Clostridiales bacterium
OBRC5-5]
gi|404342860|gb|EJZ69230.1| hypothetical protein HMPREF1135_02454 [Clostridiales bacterium
OBRC5-5]
Length = 180
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L L +E+ +H +E + G +G + KN+ L +++ RF++ D K
Sbjct: 28 LDGLGVEYEVVDHDEASDMEKCKEIEGALGVKICKNIVLCNRQETRFFLFMMPGDKKYVT 87
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++L + + L A E + E L V GSV+ L+N+ V L++DK +
Sbjct: 88 KDISKKLDMSR--LSFAKENYLKEFLDVTPGSVSVLGLLNDKDNRVELVIDKDVIQADFI 145
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVD 163
HP N ++ ++T+D L+K + ++G++ +D
Sbjct: 146 RCHPCENTSTLKISTDDFLNKIIPALGKEAKIID 179
>gi|238020182|ref|ZP_04600608.1| hypothetical protein GCWU000324_00057 [Kingella oralis ATCC 51147]
gi|237868576|gb|EEP69580.1| hypothetical protein GCWU000324_00057 [Kingella oralis ATCC 51147]
Length = 161
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I + + +H + +V + G KNL LK KK + Y + L D K D+
Sbjct: 13 LAKLNIAYERLDHAPITSVRDTDIV---LPGQQVKNLCLKTKKGKQYFLVILRDEKSADL 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K L++ LG+ + L +E + +L V G+VTPF ++ + V +++D +
Sbjct: 70 KRLAEALGVSR--LSFVGDEELTALLAVEAGTVTPFGVLFDVDNKVQVVIDAEVDETQTV 127
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
FHP N ++++ D +FL+ G P V
Sbjct: 128 GFHPFINTTTLNIAYADFVRFLEYAGHPPLRV 159
>gi|312864895|ref|ZP_07725126.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
downei F0415]
gi|311100022|gb|EFQ58235.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
downei F0415]
Length = 161
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGL----SKNLFLKDKK-HRFYIVSALADT 66
L++L I++ +Y+H A+ + + N+ L KNL L++K+ +FY+ +
Sbjct: 13 LQELDIDYQRYDHQAITSGK-------NLDFSLPNPPVKNLLLQNKQGKQFYLYLLPNEK 65
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+ D+ L+Q L + L A + + E+L V G+VTP L+ + + LL+D+ K
Sbjct: 66 RADLSALAQ--VLEEKRLTFAKAQQLEELLHVSAGTVTPLGLMFDKKNRIKLLVDENLKE 123
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
HP N ++S++ D ++ + +G D V
Sbjct: 124 LGVISLHPFVNSTTLSISYQDFERLMLRLGHDSKLV 159
>gi|335046216|ref|ZP_08539239.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333760002|gb|EGL37559.1| YbaK/proline--tRNA ligase associated domain protein [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 187
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I + + +H T+E + +G + KNLFL + KH FY + + K
Sbjct: 31 LDKLGISYERADHAEAHTMEDCEEVSNALGAKVCKNLFLTNSKHSFYYLLMMPGNKPFKT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
LS+ +G G L A E M +L GS + F L+++ V LL+D+ E
Sbjct: 91 AELSREIGCGH--LSFAEAEEMERVLGCTPGSASVFGLMHDKEGLVELLVDRDLLKDEYL 148
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKS 154
HP N ++ + T D+ KF+K+
Sbjct: 149 GAHPCHNIATLKVKTKDIFTKFIKA 173
>gi|253578628|ref|ZP_04855899.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849571|gb|EES77530.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 183
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG--LSKNLFLKDKKHR-FYIVSALADTKV 68
L L +++ + +H A MT+EA + +G + KNLFL +++ FY++ D
Sbjct: 25 LDKLGVQYQRIDHEAAMTMEACEEIDHALGDNTTICKNLFLCNRQETDFYLLLMPGDKPF 84
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K LS ++ + L A E M + L + GSV+ L+N+S + V LL+D+ +
Sbjct: 85 KTKDLSAQIHSAR--LSFAKPEYMEKYLDITPGSVSVLGLMNDSEKKVQLLIDEDVMKEP 142
Query: 129 RCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ T DL K + ++ +P V L
Sbjct: 143 YFGCHPCINTSSLKFTTEDLMQKIIPALEHEPVTVTL 179
>gi|225572989|ref|ZP_03781744.1| hypothetical protein RUMHYD_01180 [Blautia hydrogenotrophica DSM
10507]
gi|225039640|gb|EEG49886.1| YbaK/proline--tRNA ligase associated domain protein [Blautia
hydrogenotrophica DSM 10507]
Length = 162
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSA 62
+K Q+ LK + EH AV + + +KNLF++D K R +Y+++
Sbjct: 2 NKQQIYDYLKQENVWHEITEHEAVYNMAELSSLEIPYPEYDAKNLFVRDDKKRNYYLITV 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +VD+K R L A + +++IL + GSVTP L+N+S V L LD
Sbjct: 62 KGDKRVDLKEF--RKNNNTRALSFASADDLMDILGLIPGSVTPLGLLNDSECRVTLFLDN 119
Query: 123 GF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
F HP N ++ L T DL K ++ G
Sbjct: 120 DFMNGLGLIGVHPNDNTATVFLKTEDLMKLIQQHG 154
>gi|363896547|ref|ZP_09323098.1| hypothetical protein HMPREF9624_01842 [Oribacterium sp. ACB7]
gi|361960833|gb|EHL14066.1| hypothetical protein HMPREF9624_01842 [Oribacterium sp. ACB7]
Length = 187
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L L I + + +H T+E + +G + KNLFL + KH FY + + K
Sbjct: 31 LDKLGIPYERADHAEAHTMEDCEEVSSALGAKVCKNLFLTNSKHSFYYLLMMPGNKPFKT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
LS+ +G G L A E M +L GS + F L+++ V LL+D+ E
Sbjct: 91 AELSREIGCGH--LSFAEAEEMERVLGCTPGSASVFGLMHDKEGLVELLVDRDLLKDEYL 148
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKS 154
HP N ++ + T D+ KF+K+
Sbjct: 149 GAHPCHNIATLKVKTKDIFTKFIKA 173
>gi|291541547|emb|CBL14657.1| Uncharacterized conserved protein [Ruminococcus bromii L2-63]
Length = 181
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H T+EA + + + KNLFL ++ K FY++ D
Sbjct: 25 LDSLGIEYQRTDHGHADTMEACNEIDAVLDVLICKNLFLCNRQKTDFYLLMMPGDKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++G + L A + MLE L + LG+V+ L+N+ V LL+D+ E
Sbjct: 85 KELSKQIGSAR--LSFATSDFMLEFLDIKLGAVSVMGLMNDKDNRVRLLVDEDVLKGEYV 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + T D+ K+L ++ V L
Sbjct: 143 GCHPCVNTSSLKIKTADVFGKYLDAVHHTATTVKL 177
>gi|281492633|ref|YP_003354613.1| hypothetical protein LLKF_2216 [Lactococcus lactis subsp. lactis
KF147]
gi|281376297|gb|ADA65788.1| Hypothetical protein LLKF_2216 [Lactococcus lactis subsp. lactis
KF147]
Length = 163
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L +L+I ++ EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LAELEIPYNIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
L + +G+ + L EE + ++L + G V+ F LV ++ + D+ ++
Sbjct: 71 NRLGEIIGVKR--LHFVSEERLEDMLGLNSGIVSLFGLVGNHYNNMHIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I + LKS G D +DL
Sbjct: 129 QT---FHPNDNTKTIFFAMDACFTILKSQGYDYQIIDL 163
>gi|268608734|ref|ZP_06142461.1| prolyl-tRNA synthetase / glutamyl-tRNA synthetase [Ruminococcus
flavefaciens FD-1]
Length = 181
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVD 69
+L L IE+ + +H T+E +G + KNLFL ++ K FY++ D
Sbjct: 26 KLDALGIEYKRADHDHADTMEDCLAIEKVLGAKICKNLFLCNRQKTSFYMLLMPGDKPFK 85
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K LS +L + L A + M E L GSV+ L+ ++ ++ L++D + E
Sbjct: 86 TKFLSSQLNCAR--LSFAEADKMQEYLHTIPGSVSALELIFDTDNNIQLVIDNDLMSDEY 143
Query: 130 CFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP N ++ L ++ K++++ +P ++DL
Sbjct: 144 ICGHPGINTSTVRLLRENMLKYVRAAKHEPTFIDL 178
>gi|336436135|ref|ZP_08615848.1| hypothetical protein HMPREF0988_01433 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008175|gb|EGN38194.1| hypothetical protein HMPREF0988_01433 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 181
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L L+I + + +H MT+EA + + + KNL L +++ FY++ D
Sbjct: 27 LDRLKIPYRRIDHEMAMTMEACEEIEQVLECSICKNLMLTNRQETDFYLLLMPGDKPFKT 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++G + L A E M + L + GS++ L+N+ + V LL+D +E
Sbjct: 87 KNLSAQIGSAR--LSFAKPEYMEKYLDITPGSLSILGLMNDREKKVRLLIDADVLKEEWF 144
Query: 131 FFHPLSNDMSISLNTNDLDKFL-KSIGRDPAYVDLEA 166
HP N S+ + D++ L ++G +P V+L
Sbjct: 145 GCHPCINTSSLKMRMQDVENVLIPALGHEPQIVELHV 181
>gi|422866635|ref|ZP_16913254.1| hypothetical protein HMPREF9520_00009 [Enterococcus faecalis
TX1467]
gi|329578214|gb|EGG59617.1| hypothetical protein HMPREF9520_00009 [Enterococcus faecalis
TX1467]
Length = 93
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 53/86 (61%)
Query: 79 LGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSND 138
+G+ ++MA E+++++ +++P G V+ F L+N + D+ + DK + R FHP N
Sbjct: 8 IGEKRIKMASEDSLMKKMELPEGVVSIFGLINNNENDIYVYFDKEITKESRMSFHPNVNT 67
Query: 139 MSISLNTNDLDKFLKSIGRDPAYVDL 164
+I L+TN+ KFL++I + +D+
Sbjct: 68 KTIFLDTNNAFKFLENIDYNYFIIDI 93
>gi|456371434|gb|EMF50330.1| hypothetical protein SPJ2_1150 [Streptococcus parauberis KRS-02109]
gi|457094745|gb|EMG25258.1| hypothetical protein SPJ1_1362 [Streptococcus parauberis KRS-02083]
Length = 153
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 12 LKDLQIEFSQ-------YEHPAVMTVE-AQA-KYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
+KDL+ F+Q Y+H + T E A+A K G +K+L+LKDKK R Y+
Sbjct: 1 MKDLKQVFTQADFYFEWYDHEPIFTYEGAEAMKAEKGFWGTETKSLYLKDKKKRHYVYLT 60
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEET-MLEILK-VPLGSVTPFALVNESARDVALLL 120
L + +VD K L + GLR++ E+T ++EI+ G+V P E+ L+
Sbjct: 61 LPEKQVDFKALKEAT-----GLRLSIEKTDVMEIMTGQEAGAVGPLGYEEET----PLIF 111
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
DK E+ F P + +I + ++DL+K + +G
Sbjct: 112 DKELLGHEKLVFAPGTPCSTIVVKSSDLEKICQVLG 147
>gi|326792277|ref|YP_004310098.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Clostridium lentocellum DSM 5427]
gi|326543041|gb|ADZ84900.1| YbaK/prolyl-tRNA synthetase associated region [Clostridium
lentocellum DSM 5427]
Length = 181
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L+ L I F + +H AV T+E + +G + KNLFL KK +Y++ D
Sbjct: 29 LEQLGIPFERLDHEAVATIEDCGEIDQYLGITIYKNLFLCNSKKDHYYLLVMPGDKTFKS 88
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
++Q++G + L E + + L + GSV+ L+ + + V LL+D+ E
Sbjct: 89 SPIAQQIGSTR--LSFGAPEILEDYLNLTPGSVSITGLLYDQEQRVQLLIDEAILETEYF 146
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
FHP N S+ + T+DL ++ + + YV +
Sbjct: 147 GFHPCINTTSLKIKTSDLIERLIPYLNHPITYVTI 181
>gi|167760682|ref|ZP_02432809.1| hypothetical protein CLOSCI_03067 [Clostridium scindens ATCC 35704]
gi|336423651|ref|ZP_08603775.1| hypothetical protein HMPREF0993_03152 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167661569|gb|EDS05699.1| hypothetical protein CLOSCI_03067 [Clostridium scindens ATCC 35704]
gi|336003305|gb|EGN33390.1| hypothetical protein HMPREF0993_03152 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 184
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H A T+ + +G + KNLFL ++ K FY++ +
Sbjct: 25 LDRLGIEYLRTDHEAAGTIADCLEVDQVLGITICKNLFLCNRQKTEFYLLMMPGHKSLRT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E M++ L V GS T L+N++ V LL+D+ E
Sbjct: 85 KELSAQIPTSR--LSFASGEDMVKYLNVLPGSATVMGLMNDTENHVQLLVDEEILKDEYV 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEAN 167
HP N S+ + T D+ KFL ++ D V L N
Sbjct: 143 GCHPCVNTSSVKICTEDVFGKFLDAVHHDYITVTLSDN 180
>gi|402311385|ref|ZP_10830330.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnospiraceae bacterium ICM7]
gi|400372667|gb|EJP25607.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnospiraceae bacterium ICM7]
Length = 180
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L L +E+ +H +E + G +G + KN+ L +++ +F++ D K
Sbjct: 28 LDGLGVEYEVVDHDEASDMEKCKEIEGTLGVKICKNIVLCNRQETKFFLFMMPGDKKYVT 87
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++L + + L A E + E L V GSV+ L+N+ V L++DK +
Sbjct: 88 KDISKKLDMSR--LSFAKENYLKEFLDVTPGSVSVLGLLNDKDNRVELVIDKDVIQADFI 145
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVD 163
HP N ++ ++T D L+K + ++G++ +D
Sbjct: 146 RCHPCENTSTLKISTEDFLNKIIPALGKEAKIID 179
>gi|329117035|ref|ZP_08245752.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parauberis NCFD 2020]
gi|326907440|gb|EGE54354.1| YbaK/proline--tRNA ligase associated domain protein [Streptococcus
parauberis NCFD 2020]
Length = 153
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 12 LKDLQIEFSQ-------YEHPAVMTVE-AQA-KYVGNIGGGLSKNLFLKDKKHRFYIVSA 62
+KDL+ F+Q Y+H + T E A+A K G +K+L+LKDKK R Y+
Sbjct: 1 MKDLKQVFTQVDFYFEWYDHEPIFTYEGAEAMKAEKGFWGTETKSLYLKDKKKRHYVYLT 60
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEET-MLEILK-VPLGSVTPFALVNESARDVALLL 120
L + +VD K L + GLR++ E+T ++EI+ G+V P E+ L+
Sbjct: 61 LPEKQVDFKALKEAT-----GLRLSIEKTDVMEIMTGQEAGAVGPLGYEEET----PLIF 111
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIG 156
DK E+ F P + +I + ++DL+K + +G
Sbjct: 112 DKELLGHEKLVFAPGTPCSTIVVKSSDLEKICQVLG 147
>gi|238917933|ref|YP_002931450.1| prolyl-tRNA synthetase / glutamyl-tRNA synthetase [Eubacterium
eligens ATCC 27750]
gi|238873293|gb|ACR73003.1| prolyl-tRNA synthetase / glutamyl-tRNA synthetase [Eubacterium
eligens ATCC 27750]
Length = 184
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L +E+ + +H T+E + + KNLFL ++ K FY++ D
Sbjct: 25 LDKLGMEYYRTDHEPATTMEVCNDIDKILDTLICKNLFLCNRQKTNFYMLMMPGDKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++ + L A E M E L + GSV+ L+N++ V LL+DK E
Sbjct: 85 KDLSKQINSAR--LSFADESYMEEFLDITPGSVSIMGLMNDTDNHVQLLMDKEVLEGESL 142
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ L T + ++KFL ++ + V+L
Sbjct: 143 GCHPCINTSSLKLKTKEVMEKFLPAVHHEAVIVEL 177
>gi|160893947|ref|ZP_02074726.1| hypothetical protein CLOL250_01502 [Clostridium sp. L2-50]
gi|156864325|gb|EDO57756.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sp. L2-50]
Length = 200
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+ + +H T+E + + + KNLFL ++ K +FY++ D
Sbjct: 44 LDHLGIEYKRVDHEPAFTMEVCEEIDKMLQATICKNLFLCNRQKTQFYLLMMPGDKPFKT 103
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K ++ ++G + L A E M + L + G+V+ L+N++ V LL+D+ E
Sbjct: 104 KEITSQIGSAR--LSFASAEDMEKYLDIEPGAVSVMGLMNDTEHHVRLLVDEDILKGEYL 161
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ + T D+ +L ++G D V L
Sbjct: 162 GCHPCVNTSSLRMRTADVFGSYLDAVGHDMTKVVL 196
>gi|225568960|ref|ZP_03777985.1| hypothetical protein CLOHYLEM_05039 [Clostridium hylemonae DSM
15053]
gi|225162459|gb|EEG75078.1| hypothetical protein CLOHYLEM_05039 [Clostridium hylemonae DSM
15053]
Length = 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L L IE+S+ +H V T+ + +G + KNLFL ++ K FY++ +
Sbjct: 25 LDGLGIEYSRTDHGPVGTIADCLEVDKVLGITICKNLFLCNRQKTAFYLLMLPGHKVLRT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS ++ + L A E M+ + V GS T L+ ++ V LL+D+ +E
Sbjct: 85 KELSAQIPTSR--LSFASGEDMVRYMNVAPGSATVMGLIYDTDCSVQLLVDEEILQEEYV 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEAN 167
HP N S+ L T D+ KFL ++ D V L ++
Sbjct: 143 GCHPCVNTSSLKLRTEDVFGKFLAAVHHDYKTVTLSSD 180
>gi|163816190|ref|ZP_02207558.1| hypothetical protein COPEUT_02374 [Coprococcus eutactus ATCC 27759]
gi|158448610|gb|EDP25605.1| hypothetical protein COPEUT_02374 [Coprococcus eutactus ATCC 27759]
Length = 180
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L D IE+ + +H T+E + +G + KNLFL ++ K +FY++ D
Sbjct: 25 LDDHGIEYWRTDHAPADTMEVCYEIDAVLGATICKNLFLCNRQKTQFYLLMMPGDKPFKT 84
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K ++ ++G + L A E M + L + G+V+ L+N+ V LL+D+ E
Sbjct: 85 KEITSQIGSAR--LSFASPEDMEKYLDIRPGAVSVMGLMNDHENHVQLLVDEDVMKGEYL 142
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP S+ + T D+ KFL+++ D V L
Sbjct: 143 GCHPCVCTSSLKIRTEDIFGKFLEAVHHDMIKVTL 177
>gi|392424855|ref|YP_006465849.1| hypothetical protein Desaci_1504 [Desulfosporosinus acidiphilus
SJ4]
gi|391354818|gb|AFM40517.1| hypothetical protein Desaci_1504 [Desulfosporosinus acidiphilus
SJ4]
Length = 183
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L+ L I + + +H ++E + + + KNLFL +K FY++ K
Sbjct: 31 LEKLDIPYYRLDHDETPSIEFCFEVEKLLEIDICKNLFLCNSQKTSFYLLMMPGRKKFRT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++ + L A E M + LK+ GSV+ LV + + V LL+DK E
Sbjct: 91 KDLSRQINSSR--LSFAEAEDMEKYLKLKPGSVSVLGLVYDIRKSVQLLIDKEVLESEYV 148
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T+D L KFL G +P V+L
Sbjct: 149 GCHPCINTSSLKIKTSDLLSKFLPYTGHEPLLVEL 183
>gi|283795960|ref|ZP_06345113.1| putative YbaK/prolyl-tRNA synthetase domain protein [Clostridium
sp. M62/1]
gi|291076606|gb|EFE13970.1| hypothetical protein CLOM621_05856 [Clostridium sp. M62/1]
Length = 188
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSALADTKVDM 70
L L + + + +H T+E + + + KNLFL + +K FY++ + K
Sbjct: 32 LDSLGVSYQRMDHDPTDTIEVCHEVEALLQIRICKNLFLCNAQKTNFYLLLMPGEKKFKT 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ S+++G + L A E M + L + GSV+ L+N++ V L +D+
Sbjct: 92 AIFSKQMGCSR--LSFASAEFMEQFLDITPGSVSVLGLMNDTENRVRLAIDRDVLKDGYF 149
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T D LDK L ++G + VDL
Sbjct: 150 GCHPCINTSSLKIRTCDLLDKILPALGHEYTLVDL 184
>gi|15674012|ref|NP_268187.1| hypothetical protein L89201 [Lactococcus lactis subsp. lactis
Il1403]
gi|385831558|ref|YP_005869371.1| Prolyl-tRNA editing protein [Lactococcus lactis subsp. lactis CV56]
gi|12725078|gb|AAK06128.1|AE006432_10 unknown protein [Lactococcus lactis subsp. lactis Il1403]
gi|326407566|gb|ADZ64637.1| Prolyl-tRNA editing protein [Lactococcus lactis subsp. lactis CV56]
Length = 163
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L +L+I ++ EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LAELEIPYNIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
L + +G+ + L EE + ++L + G V+ F LV + ++ + D+ ++
Sbjct: 71 NRLGEIIGVKR--LHFVSEERLEDMLGLNSGIVSLFGLVGKHYNNMHIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I + LKS G + +DL
Sbjct: 129 QT---FHPNDNTKTIFFAMDACFTILKSQGYEYQIIDL 163
>gi|269123625|ref|YP_003306202.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Streptobacillus moniliformis DSM 12112]
gi|268314951|gb|ACZ01325.1| YbaK/prolyl-tRNA synthetase associated region [Streptobacillus
moniliformis DSM 12112]
Length = 154
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKV-DM 70
LK L IE+ +H + +V+ ++ + G KNL LK KK + L D K+ ++
Sbjct: 6 LKKLNIEYVTLKHEPISSVK---DHLFELEGQQIKNLLLKAKKTENIYLVLLHDEKLLNL 62
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L+++L + L A TMLE+ G +TPF L+ + + + L++D
Sbjct: 63 TDLAEKLN--EKRLSFASSSTMLELTGCNPGELTPFGLIFDKEKRINLIIDTAIDTNTTI 120
Query: 131 FFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
HP N ++++ D +KF + G +++L
Sbjct: 121 GAHPFINTKTLNIQFKDFEKFFEYTGHKINFIEL 154
>gi|116512976|ref|YP_811883.1| hypothetical protein LACR_2315 [Lactococcus lactis subsp. cremoris
SK11]
gi|414075048|ref|YP_007000265.1| hypothetical protein uc509_2003 [Lactococcus lactis subsp. cremoris
UC509.9]
gi|116108630|gb|ABJ73770.1| Ala-tRNA(Pro) hydrolase [Lactococcus lactis subsp. cremoris SK11]
gi|413974968|gb|AFW92432.1| hypothetical protein uc509_2003 [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L +L I + EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LTELSIPYKIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
LS+ L + + L E+ + E+L + G V+ F LV + ++ + D+ ++
Sbjct: 71 NRLSEILEVKR--LHFISEDRLEEMLGLNSGIVSLFGLVGTNYENMNIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I LKS G D +DL
Sbjct: 129 QT---FHPNDNTKTIFFKMEACFTILKSQGYDYQIIDL 163
>gi|197301958|ref|ZP_03167021.1| hypothetical protein RUMLAC_00688 [Ruminococcus lactaris ATCC
29176]
gi|197298906|gb|EDY33443.1| YbaK/proline--tRNA ligase associated domain protein [Ruminococcus
lactaris ATCC 29176]
Length = 186
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG--LSKNLFLKDKK-HRFYIVSALADTKV 68
L L + + + +H A MT+EA + +G G + KNLFL +++ FY++ D
Sbjct: 27 LDRLGVAYQRVDHEAAMTMEACEEIDRVLGDGTAICKNLFLCNRQATEFYLLLMPGDKPF 86
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K LS ++G + L A E M + L + GSV+ L+N+ V LL+D+ +
Sbjct: 87 KTKELSAQIGSSR--LSFAKSEYMEKYLDITPGSVSVLGLMNDIEGKVRLLIDEDVLTER 144
Query: 129 RCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
HP N S+ T DL K + ++ P V L
Sbjct: 145 YFGCHPCINTSSLKFTTEDLIGKVIPALKHAPKMVKL 181
>gi|146319136|ref|YP_001198848.1| hypothetical protein SSU05_1482 [Streptococcus suis 05ZYH33]
gi|145689942|gb|ABP90448.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
Length = 124
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 53 KKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNES 112
KK FY++ ++DM +G + +RMA ++++E + +P G+V+ F L++
Sbjct: 14 KKTAFYLLIMDDQKQLDMDQFRDLVGANR--IRMASSDSLMEKMHLPAGAVSVFGLLHNV 71
Query: 113 ARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
+D+ + DK ++ FHP N +I + T D+ +F++ IG VD
Sbjct: 72 DKDIQVFFDKEILSEPILTFHPNVNTKTIFVKTEDVLRFVEEIGFSATIVD 122
>gi|385839311|ref|YP_005876941.1| aminoacyl-tRNA editing like protein [Lactococcus lactis subsp.
cremoris A76]
gi|358750539|gb|AEU41518.1| aminoacyl-tRNA editing like protein [Lactococcus lactis subsp.
cremoris A76]
Length = 163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L +L I + EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LTELSIPYKIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
LS+ L + + L E+ + E+L + G ++ F LV + ++ + D+ ++
Sbjct: 71 NRLSEILEVKR--LHFISEDRLEEMLGLNSGIISLFGLVGTNYENMNIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I LKS G D +DL
Sbjct: 129 QT---FHPNDNTKTIFFKMEACFTILKSQGYDYQIIDL 163
>gi|153811666|ref|ZP_01964334.1| hypothetical protein RUMOBE_02058 [Ruminococcus obeum ATCC 29174]
gi|149832407|gb|EDM87492.1| YbaK/proline--tRNA ligase associated domain protein [Ruminococcus
obeum ATCC 29174]
Length = 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG---LSKNLFLKDKKH-RFYIVSALADTK 67
L L I + + +H A MT+EA + V I G + KNLFL +++ FY++ D
Sbjct: 25 LDKLGIAYQRVDHEATMTMEA-CEEVDRILGDDTTICKNLFLCNRQETNFYLLLMPGDKP 83
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
K LS ++ + L A E M + L + GSV+ L+N+ + V LL+D+
Sbjct: 84 FKTKDLSAQINSAR--LSFAKPEYMEKYLDITPGSVSVMGLMNDHDKKVQLLIDEDVMKN 141
Query: 128 ERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLEANP 168
HP N S+ T DL +K + + P V+L NP
Sbjct: 142 PYFGCHPCINTSSLKFTTEDLKNKIIPELEHAPLMVNL-PNP 182
>gi|423402275|ref|ZP_17379448.1| hypothetical protein ICW_02673 [Bacillus cereus BAG2X1-2]
gi|401652174|gb|EJS69734.1| hypothetical protein ICW_02673 [Bacillus cereus BAG2X1-2]
Length = 158
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFYIVSALA 64
Q++ L++ I + QY H ++ E K + G SK+LFLKDK + +YI +
Sbjct: 4 QVVELLEEAAISYKQYTHEPILDYETDRKIRERFKLEGVPSKSLFLKDKSNNYYIFVTVE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+D K++ + +G + + E ++E G V+PF NE + L++D+
Sbjct: 64 GEKLDSKLMKELVG---KRISICSAEELIEKTSCVPGCVSPFGYSNE----ITLIIDRKI 116
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRD 158
+ P +++I + T +++ L + D
Sbjct: 117 YNYNKFLLSPGIPEITIEIPTKSINEILNIVEND 150
>gi|154335629|ref|XP_001564053.1| putative prolyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061084|emb|CAM38105.1| putative prolyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 719
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 45 SKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVT 104
+K LFLK KK + +AL T ++K + Q + K LR A E + E L V G VT
Sbjct: 52 TKTLFLKSKKGDLVMATALKSTATELKFI-QNVTNTKD-LRFASNEVLHECLAVVQGCVT 109
Query: 105 PFALVNESA-RDVALLLDKGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
PF L+N + R + LLLD + F ND + ++ L +L+ IG V
Sbjct: 110 PFPLLNHTENRPITLLLDTSMAHSTQLLAFCLCRNDYTAAITFQQLKMYLEKIGYAYKLV 169
Query: 163 DLEANPA 169
D A A
Sbjct: 170 DFGAASA 176
>gi|331003467|ref|ZP_08326966.1| hypothetical protein HMPREF0491_01828 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412513|gb|EGG91902.1| hypothetical protein HMPREF0491_01828 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 180
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L + IE+ +H ++ + G +G + KN+ L +++ RF++ D K
Sbjct: 28 LDSIGIEYEVVDHDEASDMDKCREIEGALGVKICKNIVLCNRQETRFFLFMMPGDKKYVT 87
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++L + + L A E + E L V GSV+ L+N+ V L++D +
Sbjct: 88 KDISKKLDMSR--LSFAKENYLKEFLDVTPGSVSVLGLLNDKDNRVDLIIDSDVIKADFI 145
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVD 163
HP N ++ ++T D L+K + ++G++ +D
Sbjct: 146 RCHPCKNTSTLKISTKDFLNKIIPALGKEAKIID 179
>gi|310658361|ref|YP_003936082.1| conserved protein of unknown function [[Clostridium] sticklandii]
gi|308825139|emb|CBH21177.1| conserved protein of unknown function [[Clostridium] sticklandii]
Length = 179
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L +L +E+ ++ V ++E + +G + K++FL ++ K+ F+++ A+ D
Sbjct: 27 LNELCLEYEWVDNDEVSSMEECTEISEKLGAEIRKSIFLCNRQKNMFFLLIMPANKAFDT 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
KV S L + + L A E M E L V G+ + +L+N+ V L++D +
Sbjct: 87 KVFSAALNVPR--LSFASGELMEEYLGVLPGNASVMSLINDKDNRVQLVIDDEVAKNDWF 144
Query: 131 FFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDL 164
+P N + + TNDL DKFL I P + L
Sbjct: 145 GCNPGVNTSHLKIKTNDLIDKFLPYINHKPTIISL 179
>gi|153853064|ref|ZP_01994473.1| hypothetical protein DORLON_00458 [Dorea longicatena DSM 13814]
gi|149753850|gb|EDM63781.1| YbaK/proline--tRNA ligase associated domain protein [Dorea
longicatena DSM 13814]
Length = 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L+ L+I + Q ++ ++E A+ IG + KN+FL KK F+++ AD D
Sbjct: 26 LEKLKIPYEQVDNDPASSMEECAEVDKAIGTEIRKNVFLCNQKKTTFFLLVMPADKAFDT 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
S++LG+ + AP E MLE L GS + L+ + V +++DK E
Sbjct: 86 SSFSKKLGVSH--MSFAPPEKMLEHLGTTPGSASVAGLLTDEDDYVQVIIDKEVAEAEWF 143
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
+P N + T D L K+L +I VDL
Sbjct: 144 GCNPGINTSHLKFKTKDLLQKYLPAIHHRARIVDL 178
>gi|167758113|ref|ZP_02430240.1| hypothetical protein CLOSCI_00451 [Clostridium scindens ATCC 35704]
gi|336421611|ref|ZP_08601767.1| hypothetical protein HMPREF0993_01144 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167664010|gb|EDS08140.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
scindens ATCC 35704]
gi|336000082|gb|EGN30235.1| hypothetical protein HMPREF0993_01144 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 178
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALADTKVDM 70
L L+I + Q ++ ++E A IG + KN+FL KK F+++ AD D
Sbjct: 26 LDKLKIPYEQVDNDPAASMEECAAIDKAIGTQIRKNVFLCNQKKTTFFLLVMPADKAFDT 85
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
S++LG+ + AP E M+E L GS + L+ + V +++DK E
Sbjct: 86 ASFSKKLGVSH--MSFAPPEKMMEHLGTTPGSASVAGLLMDEDDYVQVIVDKEVAEAEWF 143
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
+P N + T D L+KFL SI VDL
Sbjct: 144 GCNPGINTSHLKFKTKDLLNKFLPSIHHRARIVDL 178
>gi|223932552|ref|ZP_03624553.1| YbaK/prolyl-tRNA synthetase associated region [Streptococcus suis
89/1591]
gi|223898823|gb|EEF65183.1| YbaK/prolyl-tRNA synthetase associated region [Streptococcus suis
89/1591]
Length = 102
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 79 LGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSND 138
+G +RMA ++++E + +P G+V+ F L++ +D+ + DK ++ FHP N
Sbjct: 16 VGANRIRMASSDSLMEKMHLPAGAVSVFGLLHNVDKDIQVFFDKEILSEPILTFHPNVNT 75
Query: 139 MSISLNTNDLDKFLKSIGRDPAYVDL 164
+I + T D+ +F++ IG VDL
Sbjct: 76 KTIFVKTEDVLRFVEEIGFSAKIVDL 101
>gi|374993098|ref|YP_004968597.1| hypothetical protein Desor_0375 [Desulfosporosinus orientis DSM
765]
gi|357211464|gb|AET66082.1| hypothetical protein Desor_0375 [Desulfosporosinus orientis DSM
765]
Length = 183
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSALADTKVDM 70
L+ L I + + +H ++E + + + KNLFL + K FY++ K
Sbjct: 31 LEKLGIHYFRIDHEETPSIEVCNEVEKLLDIEICKNLFLCNSPKTSFYLLMMPGRKKFRT 90
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K LS+++ + L A E M + L + GSV+ L+N+ R V LL+DK E
Sbjct: 91 KDLSRQINSSR--LSFAEAEDMEKYLNIIPGSVSVLGLMNDVNRCVKLLMDKEVLKAEFI 148
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
HP N S+ + T+D L KFL G + V+L
Sbjct: 149 GCHPCVNTSSLKIKTSDLLTKFLPYTGHELTIVEL 183
>gi|125625068|ref|YP_001033551.1| hypothetical protein llmg_2306 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855451|ref|YP_006357695.1| hypothetical protein LLNZ_11910 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|124493876|emb|CAL98870.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071873|gb|ADJ61273.1| hypothetical protein LLNZ_11910 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 163
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L +L I + EHPA + E Y+ + G SK L L +KK +FY++ +VDM
Sbjct: 11 LTELSIPYKIVEHPASHSTEESDNYIKDYEGCRSKTLILANKKSTQFYMIIMDDAKQVDM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKA 126
LS+ L + + L E+ + E+L + G V+ F LV + ++ + D+ ++
Sbjct: 71 NRLSEILEVKR--LHFISEDRLEEMLGLNSGIVSLFGLVGTNYENMNIYFDQQMLDDYQI 128
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
Q FHP N +I LKS G D ++L
Sbjct: 129 QT---FHPNDNTKTIFFKMEACFTILKSQGYDYQIINL 163
>gi|355621666|ref|ZP_09046267.1| hypothetical protein HMPREF1020_00346 [Clostridium sp. 7_3_54FAA]
gi|354823473|gb|EHF07804.1| hypothetical protein HMPREF1020_00346 [Clostridium sp. 7_3_54FAA]
Length = 198
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 5 KDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSA 62
K+Q + L D L + +++ +H T+E+ + + + KNLFL + +K FY++
Sbjct: 36 KEQRVYTLLDSLGLSYTRIDHDPTETIESCHEVEQLLDIRICKNLFLCNAQKTSFYLLMM 95
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D K V S+++G + L A M E L + GSV+ L+N+ V L++D+
Sbjct: 96 PGDKKFRTAVFSKKMGCSR--LSFADAAHMEEYLDITPGSVSVLGLMNDPENHVRLVIDE 153
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLE 165
E HP N S+ + +DL + L +I + V+L+
Sbjct: 154 DILKDEYIGCHPCINTSSLKIKKDDLIGRILPAIHHEYTPVELD 197
>gi|392989462|ref|YP_006488055.1| regulatory protein [Enterococcus hirae ATCC 9790]
gi|392336882|gb|AFM71164.1| regulatory protein [Enterococcus hirae ATCC 9790]
Length = 157
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 16 QIEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVL 73
QI F Y H + T E K G +K+L+LKDK++ YI + D K L
Sbjct: 12 QIAFELYRHRPIFTNEDALVVKEEQGFSGTETKSLYLKDKQNNRYIFLTFTTKRSDFKKL 71
Query: 74 SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFH 133
S+ +GK ++ EE E + P G+V+PF ES+ V +++D+ AQE+ F
Sbjct: 72 SKL--IGKRVSVVSAEEMEAETGQKP-GAVSPFGY--ESS--VPIIIDEEIFAQEKLVFA 124
Query: 134 PLSNDMSISLNTNDLDKFLK 153
P D ++ + DLDK ++
Sbjct: 125 PGRPDQTMVVKVADLDKIIQ 144
>gi|323484129|ref|ZP_08089499.1| YbaK/prolyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
gi|323693226|ref|ZP_08107444.1| YbaK/prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
gi|323402571|gb|EGA94899.1| YbaK/prolyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
gi|323502709|gb|EGB18553.1| YbaK/prolyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
Length = 198
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 5 KDQLLARLKD-LQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD-KKHRFYIVSA 62
K+Q + L D L + +++ +H T+E+ + + + KNLFL + +K FY++
Sbjct: 36 KEQRVYTLLDSLGLSYTRIDHDPTETIESCHEVERLLDIRICKNLFLCNAQKTSFYLLMM 95
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D K V S+++G + L A M E L + GSV+ L+N+ V L++D+
Sbjct: 96 PGDKKFRTAVFSKKMGCSR--LSFADAAHMEEYLDITPGSVSVLGLMNDPENHVRLVIDE 153
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDL-DKFLKSIGRDPAYVDLE 165
E HP N S+ + +DL + L +I + V+L+
Sbjct: 154 DILKDEYIGCHPCINTSSLKIKKDDLIGRILPAIHHEYTPVELD 197
>gi|423394794|ref|ZP_17371995.1| hypothetical protein ICU_00488 [Bacillus cereus BAG2X1-1]
gi|423405654|ref|ZP_17382803.1| hypothetical protein ICY_00339 [Bacillus cereus BAG2X1-3]
gi|401656387|gb|EJS73905.1| hypothetical protein ICU_00488 [Bacillus cereus BAG2X1-1]
gi|401660960|gb|EJS78432.1| hypothetical protein ICY_00339 [Bacillus cereus BAG2X1-3]
Length = 159
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLHGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKVDM----KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++D K+ + L L +P+E +E P G V PF ++DV ++
Sbjct: 63 EGTRLDRGEIKKITGEHLSL------CSPDELRMETGCTP-GCVAPFGY----SQDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
+D ++ P + +I L+T +L K L S
Sbjct: 112 VDSSIYTYDKILITPGVPEFTIELSTEELRKILLS 146
>gi|218900128|ref|YP_002448539.1| hypothetical protein BCG9842_B0125 [Bacillus cereus G9842]
gi|218540882|gb|ACK93276.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 159
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK FY+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSTSGNFYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + +RL L +P+E +E P G V PF ++DV ++
Sbjct: 63 EGTRLNRGEMKEITGERLSL------CSPDELRMETGCTP-GCVAPFGY----SQDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D A ++ P + +I L+T +L K L
Sbjct: 112 VDSSVYAYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423575325|ref|ZP_17551444.1| hypothetical protein II9_02546 [Bacillus cereus MSX-D12]
gi|423605281|ref|ZP_17581174.1| hypothetical protein IIK_01862 [Bacillus cereus VD102]
gi|401209933|gb|EJR16690.1| hypothetical protein II9_02546 [Bacillus cereus MSX-D12]
gi|401244429|gb|EJR50793.1| hypothetical protein IIK_01862 [Bacillus cereus VD102]
Length = 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFYIVSALA 64
Q++ L++ I ++QY H ++ E K + G SK+LFLKDK + +YI +
Sbjct: 4 QVVELLEEAAISYTQYTHEPILDYETDRKIRERFKLEGVPSKSLFLKDKSNNYYIFVTVE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+D K++ +G + + E ++E G V+PF +E + L++D+
Sbjct: 64 GEKLDSKLMKDLVG---KKISICSAEELIEKTSCVPGCVSPFGYSDE----ITLIIDRKI 116
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
+ P +++I + T ++K L
Sbjct: 117 YNYNKFLLSPGIPEITIEIPTKSINKIL 144
>gi|229092025|ref|ZP_04223211.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-42]
gi|228691290|gb|EEL45052.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-42]
Length = 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFYIVSALA 64
Q++ L++ I ++QY H ++ E K + G SK+LFLKDK + +YI +
Sbjct: 4 QVVELLEEAAISYTQYTHEPILDYETDRKIRERFKLEGVPSKSLFLKDKSNNYYIFVTVE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+D K++ +G + + E ++E G V+PF +E + L++D+
Sbjct: 64 GEKLDSKLMKDLVG---KRISICSAEELIEKTSCVPGCVSPFGYSDE----ITLIIDRKI 116
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
+ P +++I + T ++K L
Sbjct: 117 YNYNKFLLSPGIPEITIEIPTKSINKIL 144
>gi|229197202|ref|ZP_04323935.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1293]
gi|228586275|gb|EEK44360.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1293]
Length = 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFYIVSALA 64
Q++ L++ I ++QY H ++ E K + G SK+LFLKDK + +YI +
Sbjct: 4 QVVELLEEAAISYTQYTHEPILDYETDRKIRERFKLEGVPSKSLFLKDKSNNYYIFVTVE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+D K++ +G + + E ++E G V+PF +E + L++D+
Sbjct: 64 GEKLDSKLMKDLVG---KKISICSAEELIEKTSCVPGCVSPFGYSDE----ITLIIDRKI 116
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
+ P +++I + T ++K L
Sbjct: 117 YNYNKFLLSPGIPEITIEIPTKSINKIL 144
>gi|431593519|ref|ZP_19521848.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1861]
gi|430591396|gb|ELB29434.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1861]
Length = 101
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D+K L+++L + L EE + ++L VP G+VTP AL+++ + + +++D Q+
Sbjct: 8 DLKQLAEQLK--EKRLSFVSEEQLPDLLGVPAGTVTPLALMHDKEKKIQVVIDAAIDRQD 65
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
FHP N ++ ++ +D +K L + P Y +L
Sbjct: 66 TVGFHPNINTTTLIMDFSDFEKILVYLQHLPVYENL 101
>gi|344175494|emb|CCA88177.1| hypothetical protein RALSY_mp10719 [Ralstonia syzygii R24]
Length = 110
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ D +D+ +++ LG + L A + +L + GS++P ALVN++A V L++D+
Sbjct: 3 MPDKSLDLGAVAEALGSKR--LSFASANRLATVLGIGPGSLSPLALVNDAAGKVHLVIDE 60
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAY 161
+ HPL N +++L DL FL++IG +
Sbjct: 61 DLSQEPVFLLHPLDNTATVALAKPDLGAFLENIGHPATW 99
>gi|225570659|ref|ZP_03779682.1| hypothetical protein CLOHYLEM_06759 [Clostridium hylemonae DSM
15053]
gi|225160486|gb|EEG73105.1| hypothetical protein CLOHYLEM_06759 [Clostridium hylemonae DSM
15053]
Length = 178
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALAD 65
++ L L+I + + ++ ++E A IG + KN+FL KK F+++ AD
Sbjct: 21 KMYETLDKLKIPYERVDNDPAASMEECAAVDKAIGTEIRKNVFLCNQKKTTFFLLVMPAD 80
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
D S++LG+ + AP E MLE L GS + L+N+ V +++DK
Sbjct: 81 KAFDTASFSKKLGVSH--MSFAPPEKMLEHLGTTPGSASVAGLLNDEDDYVQVIVDKEVA 138
Query: 126 AQERCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
E +P N + T D L KFL + V+L
Sbjct: 139 ESEWFGCNPGINTSHLKFKTKDLLTKFLPHVHHRARIVEL 178
>gi|229150162|ref|ZP_04278384.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1550]
gi|228633281|gb|EEK89888.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1550]
Length = 158
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEA--QAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ ++ L I + QYEH + + + + N+ G SK+LFLKDK Y++ +
Sbjct: 3 NHVIQLLDQANISYQQYEHEPNLDYDTDREIRKRFNLEGVPSKSLFLKDKTGHNYVLVTI 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
K+D K + + +G + + E ++E G V PF +E V L++DK
Sbjct: 63 EGEKLDSKSMKELIG---KRVSICSAEELIEKTSCVPGCVAPFGYQDE----VTLIIDKK 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+ P +++I ++T D++K L +
Sbjct: 116 IYNYNKFLLSPGVPELTIEIHTEDINKILNIV 147
>gi|75761958|ref|ZP_00741878.1| DNA-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228903478|ref|ZP_04067603.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis IBL 4222]
gi|228910813|ref|ZP_04074622.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis IBL 200]
gi|434378123|ref|YP_006612767.1| hypothetical protein BTF1_23410 [Bacillus thuringiensis HD-789]
gi|74490563|gb|EAO53859.1| DNA-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228848764|gb|EEM93609.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis IBL 200]
gi|228856163|gb|EEN00698.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis IBL 4222]
gi|401876680|gb|AFQ28847.1| hypothetical protein BTF1_23410 [Bacillus thuringiensis HD-789]
Length = 159
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK FY+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSTSGNFYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + +RL L +P+E +E P G V PF ++DV ++
Sbjct: 63 EGTRLNRGEMKEITGERLSL------CSPDELRMETGCTP-GCVAPFGY----SQDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSSVYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423363438|ref|ZP_17340936.1| hypothetical protein IC1_05413 [Bacillus cereus VD022]
gi|401075367|gb|EJP83748.1| hypothetical protein IC1_05413 [Bacillus cereus VD022]
Length = 159
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK FY+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSTSGNFYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + +RL L +P+E ++ P G V PF ++DV ++
Sbjct: 63 EGTRLNRGEMKEITGERLSL------CSPDELRMKTGCTP-GCVAPFGY----SQDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D A ++ P + +I L+T +L K L
Sbjct: 112 VDSSVYAYDKILITPGVPEFTIELSTEELKKIL 144
>gi|323493597|ref|ZP_08098718.1| putative DNA-binding protein [Vibrio brasiliensis LMG 20546]
gi|323312120|gb|EGA65263.1| putative DNA-binding protein [Vibrio brasiliensis LMG 20546]
Length = 166
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADT 66
++ LK L+IE+ Q++H ++ +G G SK+LFLK K F + D
Sbjct: 12 ISLLKGLEIEYRQWQHEPILDFATDLIVAERLGWTGTHSKSLFLKLKGSGFALYLTHKDQ 71
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
++D K + LG + ++ M + L G+V PF + E + +++D G
Sbjct: 72 RLDTKAIKSLLGKRPS---ICSDQEMTQQLGCVPGAVCPFGIPEE----IPIIVDTGLYQ 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSI 155
E + P + +I +++ L K L +
Sbjct: 125 TEEILYTPADPEFTIGFSSSSLHKILTEL 153
>gi|451343873|ref|ZP_21912939.1| hypothetical protein HMPREF9943_01164 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337448|gb|EMD16610.1| hypothetical protein HMPREF9943_01164 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 166
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSAL 63
K++ L +L I + +H ++ T+E K + + KNL L +++ FY++
Sbjct: 4 KERTYKLLNNLNISYRLCDHESIDTMEGLKKIEDLLAVSICKNLLLCNRQQTSFYLLMMP 63
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K K LS ++ + L + E MLE L + GS++ L+N+ V LL+D+
Sbjct: 64 GDKKFKTKELSHQIYSSR--LSFSDNEHMLEYLDILPGSLSVLGLMNDQENHVQLLIDED 121
Query: 124 FKAQERCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
++ HP N ++ + D ++ FL + + V L
Sbjct: 122 ILKKDYIGVHPCDNTSTLKIRIEDIIEVFLPYVKHNYQIVHL 163
>gi|257887097|ref|ZP_05666750.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257823151|gb|EEV50083.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
Length = 161
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVEAQ--AKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 10 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 70 KIIG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++++ T DL+K ++
Sbjct: 123 GRPDQTMAIKTIDLNKIIQ 141
>gi|431033114|ref|ZP_19490960.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1590]
gi|430564215|gb|ELB03399.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1590]
Length = 164
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++++ T DL+K ++
Sbjct: 126 GRPDQTMAIKTIDLNKIIQ 144
>gi|228993703|ref|ZP_04153609.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
pseudomycoides DSM 12442]
gi|228999740|ref|ZP_04159315.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock3-17]
gi|229007297|ref|ZP_04164897.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock1-4]
gi|228753955|gb|EEM03393.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock1-4]
gi|228760002|gb|EEM08973.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus mycoides
Rock3-17]
gi|228766037|gb|EEM14685.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
pseudomycoides DSM 12442]
Length = 158
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+++++ L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EEVISLLHKTNVSYEKFEHEPVLDYETDRVVRERLGLQGAPSKSLFLKSKSGSYYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + QRL + +P+E + +P G V PF +++V ++
Sbjct: 63 EGTRLERNEMKEITGQRLSI------CSPDELREQTGCIP-GCVAPFGY----SQNVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
+D A ++ P + +I L+T +L K L +
Sbjct: 112 VDSSVYAYDKILITPGVPEFTIELSTEELKKILST 146
>gi|167515816|ref|XP_001742249.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778873|gb|EDQ92487.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 30/155 (19%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
RL L+I F + HP + KK F ++ A ADT V +
Sbjct: 56 RLDQLEIRFRHFAHPP------------------------EKKKDVFVLIFAAADTNVRL 91
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA--QE 128
+ L +RMA + + L++ G+VTP L+N+ V ++LD + ++
Sbjct: 92 PCVQSHFKLKN--MRMAASDVLETQLQLKGGAVTPLGLINDPGHAVHVVLDSVITSSLEQ 149
Query: 129 RCFFHPLS-NDMSISLNTNDLDKFLKSIGRDPAYV 162
HP++ N S+ ++ L +F++S G P +V
Sbjct: 150 EVLLHPIAGNHHSLVMSVEALLRFIQSCGH-PVHV 183
>gi|301054536|ref|YP_003792747.1| hypothetical protein BACI_c29870 [Bacillus cereus biovar anthracis
str. CI]
gi|423551241|ref|ZP_17527568.1| hypothetical protein IGW_01872 [Bacillus cereus ISP3191]
gi|300376705|gb|ADK05609.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
gi|401188574|gb|EJQ95642.1| hypothetical protein IGW_01872 [Bacillus cereus ISP3191]
Length = 158
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFYIVSALA 64
Q++ L++ I + QY H ++ E K + G SK+LFLKDK + +YI +
Sbjct: 4 QVVELLEEAAISYKQYTHEPILDYETDRKIRERFKLEGVPSKSLFLKDKSNNYYIFVTVE 63
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
K+D K++ +G + + E ++E G V+PF +E + L++D+
Sbjct: 64 GEKLDSKLMKDLVG---KRISICSAEELIEKTSCVPGCVSPFGYSDE----ITLIIDRKI 116
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKFL 152
+ P +++I + T +++ L
Sbjct: 117 YNYNKFLLSPGIPEITIEIPTKSINEIL 144
>gi|210608866|ref|ZP_03288030.1| hypothetical protein CLONEX_00209 [Clostridium nexile DSM 1787]
gi|210152852|gb|EEA83858.1| hypothetical protein CLONEX_00209 [Clostridium nexile DSM 1787]
Length = 193
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALAD 65
Q+L +LK I + + ++ V T+E + +G + K++FL +KK F++V A+
Sbjct: 39 QILDKLK---ISYERVDNDVVETMEECEEIDKALGTEIRKSIFLCNKKKTSFFLVVLPAN 95
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
+D LS+++G+ L A E M E L GS + L+N+ V L++DK
Sbjct: 96 KSLDTNTLSKKIGVPH--LSFASGELMKEHLGTKPGSASVMGLINDEDDYVQLIVDKEVA 153
Query: 126 AQERCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
+E +P N + + T D L+KFL I ++L
Sbjct: 154 QEEWFGCNPGINTSHLKMKTEDLLNKFLPQIRHKAKIMEL 193
>gi|326431877|gb|EGD77447.1| hypothetical protein PTSG_08543 [Salpingoeca sp. ATCC 50818]
Length = 349
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 53 KKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNES 112
KK +V+ALADT V + ++ + L + LRMA ET+ E L + G+VT L+N+
Sbjct: 228 KKDTLVLVTALADTVVSLSMVEKHLQVKN--LRMARPETLTETLGLQGGAVTSLGLINDK 285
Query: 113 ARDVALLLDKGFKAQERC---FFHPLS-NDMSISLNTNDLDKFLKSIGRDPAYVDLEANP 168
V + D+ A + HP S ND++++++ L ++ S G +D +
Sbjct: 286 EHRVHVYFDRAMIAAGKVNDILVHPTSGNDITLAISAPALLSYVASCGHTAHLMDFDTGD 345
Query: 169 AV 170
V
Sbjct: 346 VV 347
>gi|419720894|ref|ZP_14248101.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnoanaerobaculum saburreum F0468]
gi|383302975|gb|EIC94453.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnoanaerobaculum saburreum F0468]
Length = 181
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L ++ +E+ +H +E + G +G + KN+ L +++ F++ D K
Sbjct: 28 LDNIGVEYEVVDHDEASDMEKCREIEGALGVKICKNIVLCNRQETVFFLFIMPGDKKYVT 87
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++L + + L A E + E L V GSV+ L+N+ VAL++D +
Sbjct: 88 KDISKKLEVSR--LSFAKENYLKEFLDVTPGSVSVLGLLNDKDNRVALVIDSDVIKADFI 145
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLE 165
HP N ++ + T D L+K + ++ ++ +D E
Sbjct: 146 RCHPCVNTSTLKIATTDFLNKVIPALNKEAKIIDNE 181
>gi|229163951|ref|ZP_04291891.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
R309803]
gi|228619572|gb|EEK76458.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
R309803]
Length = 159
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDCIVRERLGLRGTPSKSLFLKSKSGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E +E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELRMETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
D + P + +I L+T +L K L
Sbjct: 113 DSSIYTYNKILITPGVPEFTIELSTEELKKIL 144
>gi|257895661|ref|ZP_05675314.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257832226|gb|EEV58647.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 161
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 10 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 70 KIIG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 123 GRPDQTMVIKTIDLNKIIQ 141
>gi|323143455|ref|ZP_08078138.1| YbaK/proline--tRNA ligase associated domain protein [Succinatimonas
hippei YIT 12066]
gi|322416740|gb|EFY07391.1| YbaK/proline--tRNA ligase associated domain protein [Succinatimonas
hippei YIT 12066]
Length = 163
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+KD LL L+ + F+ Y+H V + +A + G + K+L L +K+H ++ +
Sbjct: 3 NKDSLLKFLETQGVSFTLYQHARVFS-KADLSNMPETAGEVLKSLVLTNKQHDLFLFTLP 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
+ D+K L+ ++ + + + L +L G V+P AL+N+S + +
Sbjct: 62 LNKNADLKNLAMKINSTRLSFGVNQDLNPLGVLP---GMVSPLALLNDSQKRFKYIEPVE 118
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYV 162
+ HPL N SI + DL++ + G + YV
Sbjct: 119 LRQYPIVNCHPLDNAYSIDIALLDLERLVSDSGHEIVYV 157
>gi|333398258|ref|ZP_08480071.1| putative DNA-binding protein [Leuconostoc gelidum KCTC 3527]
Length = 156
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSAL 63
KD L I + Y+HP + T+E KNLFL+++ K +Y+ S
Sbjct: 2 KDNLKQLFTSRLIAYRLYKHPKIYTIEDAKNLTFTKDIFEIKNLFLRNQNKSEYYLFSLP 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
AD+K+ + ++ L + A E+ + + L V GSV+ VN+ + V +DK
Sbjct: 62 ADSKLSLAQIA--LITHNKKISFASEKDLNDKLAVTPGSVSILNAVNDLDKSVNYYIDKA 119
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ +HP ND +I + + ++ LK
Sbjct: 120 LFDHKNVAYHPNQNDETIVFDGSKIEDLLK 149
>gi|228968084|ref|ZP_04129090.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402563518|ref|YP_006606242.1| hypothetical protein BTG_23985 [Bacillus thuringiensis HD-771]
gi|228791639|gb|EEM39235.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar sotto str. T04001]
gi|401792170|gb|AFQ18209.1| hypothetical protein BTG_23985 [Bacillus thuringiensis HD-771]
Length = 159
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK FY+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSTSGNFYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + +RL L +P+E +E P G V PF +++V ++
Sbjct: 63 EGTRLNRGEMKEITGERLSL------CSPDELRMETGCTP-GCVAPFGY----SQEVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSSVYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|227551741|ref|ZP_03981790.1| YbaK family protein [Enterococcus faecium TX1330]
gi|293377729|ref|ZP_06623918.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium PC4.1]
gi|293570597|ref|ZP_06681648.1| putative regulatory protein [Enterococcus faecium E980]
gi|424766498|ref|ZP_18193851.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecalis TX1337RF]
gi|431108202|ref|ZP_19497353.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1613]
gi|431737483|ref|ZP_19526437.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1972]
gi|431756917|ref|ZP_19545549.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3083]
gi|431762143|ref|ZP_19550705.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3548]
gi|227179182|gb|EEI60154.1| YbaK family protein [Enterococcus faecium TX1330]
gi|291609268|gb|EFF38539.1| putative regulatory protein [Enterococcus faecium E980]
gi|292643729|gb|EFF61850.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium PC4.1]
gi|402410473|gb|EJV42876.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium TX1337RF]
gi|430569326|gb|ELB08330.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1613]
gi|430599140|gb|ELB36856.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1972]
gi|430620771|gb|ELB57573.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3083]
gi|430624835|gb|ELB61485.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3548]
Length = 164
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIKTIDLNKIIQ 144
>gi|431073166|ref|ZP_19494710.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1604]
gi|431586067|ref|ZP_19520582.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1861]
gi|431739925|ref|ZP_19528844.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2039]
gi|430566738|gb|ELB05834.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1604]
gi|430593245|gb|ELB31231.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1861]
gi|430604052|gb|ELB41552.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2039]
Length = 160
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIKTIDLNKIIQ 144
>gi|229119439|ref|ZP_04248736.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock1-3]
gi|229172623|ref|ZP_04300182.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus MM3]
gi|423381945|ref|ZP_17359227.1| hypothetical protein IC9_05296 [Bacillus cereus BAG1O-2]
gi|423444868|ref|ZP_17421772.1| hypothetical protein IEA_05196 [Bacillus cereus BAG4X2-1]
gi|423451160|ref|ZP_17428036.1| hypothetical protein IEC_05765 [Bacillus cereus BAG5O-1]
gi|423548879|ref|ZP_17525236.1| hypothetical protein IGO_05313 [Bacillus cereus HuB5-5]
gi|423626725|ref|ZP_17602501.1| hypothetical protein IK3_05321 [Bacillus cereus VD148]
gi|228611094|gb|EEK68357.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus MM3]
gi|228664008|gb|EEL19552.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock1-3]
gi|401121532|gb|EJQ29322.1| hypothetical protein IEC_05765 [Bacillus cereus BAG5O-1]
gi|401172844|gb|EJQ80059.1| hypothetical protein IGO_05313 [Bacillus cereus HuB5-5]
gi|401251454|gb|EJR57731.1| hypothetical protein IK3_05321 [Bacillus cereus VD148]
gi|401628187|gb|EJS46037.1| hypothetical protein IC9_05296 [Bacillus cereus BAG1O-2]
gi|402410009|gb|EJV42423.1| hypothetical protein IEA_05196 [Bacillus cereus BAG4X2-1]
Length = 158
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEA--QAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
+ ++ L I + QY+H + + + + N+ G SK+LFLKDK Y++ +
Sbjct: 3 NHVIQLLDQANISYQQYKHEPNLDYDTDREIRKRFNLEGVPSKSLFLKDKTGHNYVLVTI 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
K+D K + + +G + + E ++E G V PF +E V L++DK
Sbjct: 63 EGEKLDSKSMKELIG---KRVSICSSEELVEKTSCVPGCVAPFGYQDE----VTLIIDKK 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+ P +++I ++T D++K L +
Sbjct: 116 IYNYNKFLLSPGVPELTIEIHTEDINKILNIV 147
>gi|257884354|ref|ZP_05664007.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257820192|gb|EEV47340.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 157
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 10 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 70 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 123 GRPDQTMVIQTVDLNKIIQ 141
>gi|257882930|ref|ZP_05662583.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257889291|ref|ZP_05668944.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257818588|gb|EEV45916.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257825651|gb|EEV52277.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
Length = 157
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 10 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 70 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 123 GRPDQTMVIQTVDLNKIIQ 141
>gi|431752092|ref|ZP_19540777.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2620]
gi|430614156|gb|ELB51145.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2620]
Length = 164
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIKTIDLNKIIQ 144
>gi|425054624|ref|ZP_18458129.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 505]
gi|403035576|gb|EJY46962.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 505]
Length = 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTAKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EEQIPIIIDEELFSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIKTVDLNKIIQ 144
>gi|260560098|ref|ZP_05832276.1| predicted protein [Enterococcus faecium C68]
gi|293556663|ref|ZP_06675228.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
E1039]
gi|293560182|ref|ZP_06676684.1| putative regulatory protein [Enterococcus faecium E1162]
gi|293568123|ref|ZP_06679460.1| putative regulatory protein [Enterococcus faecium E1071]
gi|294621553|ref|ZP_06700719.1| putative regulatory protein [Enterococcus faecium U0317]
gi|314939346|ref|ZP_07846590.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a04]
gi|314943181|ref|ZP_07849974.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133C]
gi|314947480|ref|ZP_07850895.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0082]
gi|314952679|ref|ZP_07855664.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133A]
gi|314994321|ref|ZP_07859616.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133B]
gi|314996975|ref|ZP_07861972.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a01]
gi|383329023|ref|YP_005354907.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium Aus0004]
gi|389868843|ref|YP_006376266.1| YbaK family protein [Enterococcus faecium DO]
gi|415899592|ref|ZP_11551657.1| putative regulatory protein [Enterococcus faecium E4453]
gi|416129583|ref|ZP_11597324.1| putative regulatory protein [Enterococcus faecium E4452]
gi|424789651|ref|ZP_18216292.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium V689]
gi|424797084|ref|ZP_18222724.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium S447]
gi|424834670|ref|ZP_18259367.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R501]
gi|424856450|ref|ZP_18280675.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R499]
gi|424865020|ref|ZP_18288906.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R497]
gi|424950565|ref|ZP_18365725.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R496]
gi|424953252|ref|ZP_18368226.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R494]
gi|424956073|ref|ZP_18370871.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R446]
gi|424960894|ref|ZP_18375371.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1986]
gi|424966764|ref|ZP_18380521.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1140]
gi|424972923|ref|ZP_18386231.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1139]
gi|424978734|ref|ZP_18391632.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1123]
gi|424983768|ref|ZP_18396341.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV69]
gi|424988584|ref|ZP_18400896.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV38]
gi|424992658|ref|ZP_18404706.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV26]
gi|424993444|ref|ZP_18405436.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV168]
gi|424998414|ref|ZP_18410103.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV165]
gi|424999906|ref|ZP_18411498.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV161]
gi|425004577|ref|ZP_18415876.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV102]
gi|425007617|ref|ZP_18418738.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV1]
gi|425010395|ref|ZP_18421349.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E422]
gi|425014936|ref|ZP_18425580.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E417]
gi|425018321|ref|ZP_18428775.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C621]
gi|425030817|ref|ZP_18435977.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 515]
gi|425036162|ref|ZP_18440948.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 514]
gi|425037552|ref|ZP_18442213.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 513]
gi|425042624|ref|ZP_18446936.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 511]
gi|425049719|ref|ZP_18453536.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 509]
gi|425059495|ref|ZP_18462831.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 504]
gi|425060142|ref|ZP_18463446.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 503]
gi|427396266|ref|ZP_18889025.1| hypothetical protein HMPREF9307_01201 [Enterococcus durans
FB129-CNAB-4]
gi|430825578|ref|ZP_19443782.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0164]
gi|430827710|ref|ZP_19445842.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0269]
gi|430830793|ref|ZP_19448849.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0333]
gi|430833000|ref|ZP_19451013.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0679]
gi|430835706|ref|ZP_19453694.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0680]
gi|430838198|ref|ZP_19456146.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0688]
gi|430843952|ref|ZP_19461850.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1050]
gi|430845951|ref|ZP_19463816.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1133]
gi|430851754|ref|ZP_19469489.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1258]
gi|430854903|ref|ZP_19472615.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1392]
gi|430858047|ref|ZP_19475676.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1552]
gi|430860290|ref|ZP_19477894.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1573]
gi|430949056|ref|ZP_19485975.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1576]
gi|431005379|ref|ZP_19489025.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1578]
gi|431146230|ref|ZP_19499127.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1620]
gi|431252293|ref|ZP_19504351.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1623]
gi|431292274|ref|ZP_19506822.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1626]
gi|431412537|ref|ZP_19511972.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1630]
gi|431746269|ref|ZP_19535103.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2134]
gi|431750029|ref|ZP_19538756.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2297]
gi|431759425|ref|ZP_19548039.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3346]
gi|431770906|ref|ZP_19559301.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1644]
gi|431772361|ref|ZP_19560702.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2369]
gi|431775695|ref|ZP_19563966.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2560]
gi|431778872|ref|ZP_19567077.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4389]
gi|431781806|ref|ZP_19569948.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6012]
gi|431785812|ref|ZP_19573834.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6045]
gi|447912485|ref|YP_007393897.1| putative regulatory protein [Enterococcus faecium NRRL B-2354]
gi|260073933|gb|EEW62257.1| predicted protein [Enterococcus faecium C68]
gi|291589205|gb|EFF21016.1| putative regulatory protein [Enterococcus faecium E1071]
gi|291598858|gb|EFF29909.1| putative regulatory protein [Enterococcus faecium U0317]
gi|291601198|gb|EFF31485.1| YbaK/prolyl-tRNA synthetase associated region [Enterococcus faecium
E1039]
gi|291605854|gb|EFF35286.1| putative regulatory protein [Enterococcus faecium E1162]
gi|313588913|gb|EFR67758.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a01]
gi|313591268|gb|EFR70113.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133B]
gi|313595226|gb|EFR74071.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133A]
gi|313598103|gb|EFR76948.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133C]
gi|313641365|gb|EFS05945.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0133a04]
gi|313646030|gb|EFS10610.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium TX0082]
gi|364089317|gb|EHM32017.1| putative regulatory protein [Enterococcus faecium E4453]
gi|364094302|gb|EHM36491.1| putative regulatory protein [Enterococcus faecium E4452]
gi|378938717|gb|AFC63789.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
faecium Aus0004]
gi|388534092|gb|AFK59284.1| YbaK family protein [Enterococcus faecium DO]
gi|402921824|gb|EJX42245.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium V689]
gi|402921888|gb|EJX42305.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium S447]
gi|402922004|gb|EJX42411.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R501]
gi|402929973|gb|EJX49683.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R499]
gi|402932897|gb|EJX52367.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R496]
gi|402939424|gb|EJX58333.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R497]
gi|402939500|gb|EJX58406.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R494]
gi|402945589|gb|EJX63928.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1986]
gi|402946805|gb|EJX65055.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium R446]
gi|402951887|gb|EJX69756.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1139]
gi|402955859|gb|EJX73359.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1140]
gi|402960777|gb|EJX77877.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1123]
gi|402970678|gb|EJX86996.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV69]
gi|402971606|gb|EJX87870.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV38]
gi|402972393|gb|EJX88599.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV26]
gi|402982514|gb|EJX97975.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV168]
gi|402983310|gb|EJX98721.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV165]
gi|402989058|gb|EJY04015.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV102]
gi|402990301|gb|EJY05175.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV161]
gi|402994648|gb|EJY09168.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV1]
gi|402997197|gb|EJY11542.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E417]
gi|403000058|gb|EJY14209.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium E422]
gi|403002475|gb|EJY16448.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C621]
gi|403015650|gb|EJY28525.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 514]
gi|403016931|gb|EJY29716.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 515]
gi|403021798|gb|EJY34226.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 513]
gi|403022861|gb|EJY35192.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 511]
gi|403026434|gb|EJY38413.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 509]
gi|403034777|gb|EJY46204.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 504]
gi|403042916|gb|EJY53852.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 503]
gi|425722936|gb|EKU85827.1| hypothetical protein HMPREF9307_01201 [Enterococcus durans
FB129-CNAB-4]
gi|430446043|gb|ELA55742.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0164]
gi|430482382|gb|ELA59500.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0333]
gi|430484312|gb|ELA61333.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0269]
gi|430486455|gb|ELA63291.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0679]
gi|430489243|gb|ELA65872.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0680]
gi|430491942|gb|ELA68383.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0688]
gi|430496542|gb|ELA72601.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1050]
gi|430539771|gb|ELA80010.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1133]
gi|430542336|gb|ELA82444.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1258]
gi|430545999|gb|ELA85965.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1552]
gi|430547782|gb|ELA87698.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1392]
gi|430552727|gb|ELA92455.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1573]
gi|430557901|gb|ELA97337.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1576]
gi|430561412|gb|ELB00680.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1578]
gi|430575770|gb|ELB14467.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1620]
gi|430578719|gb|ELB17271.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1623]
gi|430582186|gb|ELB20614.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1626]
gi|430589492|gb|ELB27620.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1630]
gi|430609038|gb|ELB46244.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2134]
gi|430610502|gb|ELB47646.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2297]
gi|430626225|gb|ELB62811.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E3346]
gi|430634471|gb|ELB70594.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1644]
gi|430638049|gb|ELB74030.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2369]
gi|430642542|gb|ELB78316.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2560]
gi|430643353|gb|ELB79097.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4389]
gi|430646683|gb|ELB82149.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6045]
gi|430648701|gb|ELB84103.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E6012]
gi|445188194|gb|AGE29836.1| putative regulatory protein [Enterococcus faecium NRRL B-2354]
Length = 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 73 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|406580762|ref|ZP_11055951.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD4E]
gi|406583067|ref|ZP_11058160.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD3E]
gi|406585419|ref|ZP_11060409.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD2E]
gi|406590530|ref|ZP_11064895.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD1E]
gi|410937282|ref|ZP_11369143.1| YbaK family protein [Enterococcus sp. GMD5E]
gi|430819878|ref|ZP_19438522.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0045]
gi|430822613|ref|ZP_19441191.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0120]
gi|430865173|ref|ZP_19480931.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1574]
gi|431229864|ref|ZP_19502067.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1622]
gi|431743042|ref|ZP_19531923.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2071]
gi|431764199|ref|ZP_19552742.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4215]
gi|404453517|gb|EKA00570.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD4E]
gi|404457222|gb|EKA03784.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD3E]
gi|404462706|gb|EKA08419.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD2E]
gi|404469228|gb|EKA14047.1| YbaK/prolyl-tRNA synthetase-associated domain protein [Enterococcus
sp. GMD1E]
gi|410734393|gb|EKQ76313.1| YbaK family protein [Enterococcus sp. GMD5E]
gi|430440081|gb|ELA50358.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0045]
gi|430443190|gb|ELA53187.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E0120]
gi|430553251|gb|ELA92952.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1574]
gi|430573850|gb|ELB12628.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1622]
gi|430607406|gb|ELB44726.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2071]
gi|430631384|gb|ELB67706.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E4215]
Length = 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 73 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|229153165|ref|ZP_04281344.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1550]
gi|228630264|gb|EEK86914.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1550]
Length = 159
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK LS +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELSGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|30023012|ref|NP_834643.1| DNA-binding protein [Bacillus cereus ATCC 14579]
gi|218231932|ref|YP_002369775.1| hypothetical protein BCB4264_A5115 [Bacillus cereus B4264]
gi|228961219|ref|ZP_04122839.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|229049665|ref|ZP_04194222.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH676]
gi|229112417|ref|ZP_04241955.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock1-15]
gi|229130231|ref|ZP_04259190.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-Cer4]
gi|229147521|ref|ZP_04275868.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-ST24]
gi|423588830|ref|ZP_17564916.1| hypothetical protein IIE_04241 [Bacillus cereus VD045]
gi|423631679|ref|ZP_17607426.1| hypothetical protein IK5_04529 [Bacillus cereus VD154]
gi|423644166|ref|ZP_17619783.1| hypothetical protein IK9_04110 [Bacillus cereus VD166]
gi|423650852|ref|ZP_17626422.1| hypothetical protein IKA_04639 [Bacillus cereus VD169]
gi|423657907|ref|ZP_17633206.1| hypothetical protein IKG_04895 [Bacillus cereus VD200]
gi|29898572|gb|AAP11844.1| DNA-binding protein [Bacillus cereus ATCC 14579]
gi|218159889|gb|ACK59881.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|228635947|gb|EEK92430.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-ST24]
gi|228653164|gb|EEL09043.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-Cer4]
gi|228671065|gb|EEL26371.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock1-15]
gi|228722578|gb|EEL73966.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH676]
gi|228798425|gb|EEM45418.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401225218|gb|EJR31767.1| hypothetical protein IIE_04241 [Bacillus cereus VD045]
gi|401263522|gb|EJR69646.1| hypothetical protein IK5_04529 [Bacillus cereus VD154]
gi|401271231|gb|EJR77248.1| hypothetical protein IK9_04110 [Bacillus cereus VD166]
gi|401280785|gb|EJR86702.1| hypothetical protein IKA_04639 [Bacillus cereus VD169]
gi|401288641|gb|EJR94387.1| hypothetical protein IKG_04895 [Bacillus cereus VD200]
Length = 159
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK LS +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELSGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|430841483|ref|ZP_19459402.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1007]
gi|430494259|gb|ELA70509.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1007]
Length = 160
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYYHRAIYTNEDALVVKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + +++D+ ++E+ F P
Sbjct: 73 KIIG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EEQIPIIIDEELLSKEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIKTIDLNKIIQ 144
>gi|257869851|ref|ZP_05649504.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257804015|gb|EEV32837.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 111
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-V 68
ARL DL I F EHP T ++ I G +K++FL +KK Y + + D K +
Sbjct: 9 ARLTDLNISFEVIEHPPASTTAEADSFIAGIDGVRTKSMFLTNKKKTAYYLLIMDDQKRL 68
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNES 112
D+ +L + G+ +++A + + + + +P G V+ F L++ S
Sbjct: 69 DLNLLKEI--TGESRVKLASPDLLRKKMHLPPGVVSIFGLLSNS 110
>gi|373471274|ref|ZP_09562335.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371760681|gb|EHO49355.1| YbaK/proline--tRNA ligase associated domain protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 191
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
L + +E+ +H +E + G +G + KN+ L +++ +F++ D K
Sbjct: 38 LDGIGVEYEVVDHDEASDMEKCKEIEGALGVKICKNIVLCNRQETKFFLFMMPGDKKYVT 97
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
K +S++L + + L A E + E L V GSV+ L+N+ V L++D+ +
Sbjct: 98 KDVSKKLEMSR--LSFAKENYLKEFLDVTPGSVSVLGLMNDKEDVVKLVIDRDVIKADFI 155
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLE 165
HP N ++ + T+D L+K + ++ ++ +D E
Sbjct: 156 RCHPCVNTSTLKIATDDFLNKVIPALKKEAKIIDNE 191
>gi|88858698|ref|ZP_01133339.1| hypothetical protein PTD2_06839 [Pseudoalteromonas tunicata D2]
gi|88818924|gb|EAR28738.1| hypothetical protein PTD2_06839 [Pseudoalteromonas tunicata D2]
Length = 167
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 46 KNLFLKDKKHRFYIVSALADTK-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVT 104
KNLFL+D R + + TK VD K LS++L K L A +E + + L V G V+
Sbjct: 44 KNLFLRDNYGREHFLLITQPTKLVDTKALSRQLN--KARLGFASDERLAKYLAVKPGCVS 101
Query: 105 PFALVNESARDVALLLDKGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIGRDPAYVD 163
ALVN+ V +LLD+ + HP+ ND + L DL + G +
Sbjct: 102 LLALVNDRTAHVQVLLDQDIWLPNQVLQCHPMRNDQTWLLAKEDLVHIMTITGHQYQVIS 161
Query: 164 LEA 166
+ A
Sbjct: 162 VPA 164
>gi|323141093|ref|ZP_08075997.1| YbaK/proline--tRNA ligase associated domain protein
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414413|gb|EFY05228.1| YbaK/proline--tRNA ligase associated domain protein
[Phascolarctobacterium succinatutens YIT 12067]
Length = 163
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKD---KKHRF 57
M + K+ + L I F+ EH V ++E + KNLFL++ K+H
Sbjct: 1 MIFGKNDIYDLLNAKNIPFTCTEHRPVYSMEEFDVLDIPANAVICKNLFLRNSNGKQH-- 58
Query: 58 YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA 117
++++ A T VD+K L+ +L + L A E + + L + G V+PF L+N++++ V
Sbjct: 59 FLLTVPAATPVDLKELAVKLASSR--LSFASAERLEKYLGLQSGLVSPFGLLNDTSKSVI 116
Query: 118 LLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ K HP N ++ L DL L + + +++
Sbjct: 117 FVSSKNLPPSAIIGIHPNDNTATVWLTFGDLLALLSELKVEVKLIEM 163
>gi|300172891|ref|YP_003772056.1| putative DNA-binding protein [Leuconostoc gasicomitatum LMG 18811]
gi|333446533|ref|ZP_08481475.1| putative DNA-binding protein [Leuconostoc inhae KCTC 3774]
gi|299887269|emb|CBL91237.1| putative DNA-binding protein [Leuconostoc gasicomitatum LMG 18811]
Length = 156
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSAL 63
KD L I + Y+HP + T+E KNLFL+++ K +Y+ S
Sbjct: 2 KDNLKQLFTSRLIAYRLYKHPKIYTIEDAKNLAFTKDIFEIKNLFLRNQNKSEYYLFSLP 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
AD+K+ + ++ L + A E+ + + L V GSV+ VN+ + V +DK
Sbjct: 62 ADSKLSLAQIA--LITHNKKISFASEKDLNDKLGVTPGSVSILNAVNDLDKSVNYYIDKT 119
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ +HP ND +I + + ++ LK
Sbjct: 120 LFDHKNVAYHPNQNDETIVFDGSKIEDLLK 149
>gi|406996074|gb|EKE14569.1| hypothetical protein ACD_12C00418G0001 [uncultured bacterium]
Length = 619
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
DQ+ L ++++ EH V T E AK G+ +K L +K K IV D
Sbjct: 471 DQIKNLLDQSKVDYKVMEHKPVFTSEDAAKIRGSSLSLGAKALIMKADKKPIMIVVP-GD 529
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
K+D + + L MA +E + I V +G+V PF + + L DK
Sbjct: 530 KKIDTSAFKKLYEIK--DLEMATKEEVKNISNVEVGAVPPFG----NLFKIPLYFDKTIT 583
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+E FF+ S+ SIS+ DL+K K I
Sbjct: 584 EKEVVFFNAGSHSKSISMKGTDLEKVTKPI 613
>gi|423566139|ref|ZP_17542414.1| hypothetical protein II5_05542 [Bacillus cereus MSX-A1]
gi|401192453|gb|EJQ99468.1| hypothetical protein II5_05542 [Bacillus cereus MSX-A1]
Length = 159
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGSPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|294613921|ref|ZP_06693856.1| putative regulatory protein [Enterococcus faecium E1636]
gi|430849596|ref|ZP_19467369.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1185]
gi|291593196|gb|EFF24770.1| putative regulatory protein [Enterococcus faecium E1636]
gi|430537347|gb|ELA77690.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1185]
Length = 160
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTMKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 73 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|406599549|ref|YP_006744895.1| DNA-binding protein [Leuconostoc gelidum JB7]
gi|406371084|gb|AFS40009.1| putative DNA-binding protein [Leuconostoc gelidum JB7]
Length = 156
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSAL 63
KD L I + Y+HP + T+E KNLFL+++ K +Y+ S
Sbjct: 2 KDNLKQLFTSRLIAYRLYKHPKIYTIEDAKNLTFTKDIFEIKNLFLRNQNKSEYYLFSLP 61
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
AD+K+ + ++ L + A E+ + + L V GSV+ VN+ + V +DK
Sbjct: 62 ADSKLSLAQIA--LITHNKKISFASEKDLNDKLGVTPGSVSILNAVNDLDKSVNYYIDKA 119
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
+ +HP ND +I + + + LK
Sbjct: 120 LFDHKNVAYHPNQNDETIVFDGSKIKDLLK 149
>gi|303258456|ref|ZP_07344459.1| putative DNA-binding protein [Burkholderiales bacterium 1_1_47]
gi|302858902|gb|EFL81990.1| putative DNA-binding protein [Burkholderiales bacterium 1_1_47]
Length = 170
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L+ I F H + T E K G K L +K+KK +F++ + + + K
Sbjct: 12 LRTHNIPFKALNHLPITTCEEGLKIAKEFGSTCCKTLLVKNKK-QFFLFVIPGEERFNAK 70
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ L L A E + ++ G+V+ L+ + ++++L +D E
Sbjct: 71 QAAAFLK--SSHLSFASPEDLSRLMHTFPGAVSLLGLIFDQNKEISLYIDSRILNAEHID 128
Query: 132 FHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEANPAVGKDQ 174
HP +ND S+ L+ D L+KFL S+G +Y + ++ G+ +
Sbjct: 129 CHPCTNDRSLILSVKDVLEKFLPSLG--VSYFEFQSGSLNGESK 170
>gi|431370230|ref|ZP_19509929.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1627]
gi|430583977|gb|ELB22335.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1627]
Length = 160
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 73 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQMPIIIDEELLSNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|206970350|ref|ZP_03231303.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228955240|ref|ZP_04117248.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229072463|ref|ZP_04205665.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
F65185]
gi|229082222|ref|ZP_04214685.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock4-2]
gi|229181272|ref|ZP_04308602.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
172560W]
gi|229193254|ref|ZP_04320205.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus ATCC
10876]
gi|365163053|ref|ZP_09359176.1| hypothetical protein HMPREF1014_04639 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423427096|ref|ZP_17404127.1| hypothetical protein IE5_04785 [Bacillus cereus BAG3X2-2]
gi|423438390|ref|ZP_17415371.1| hypothetical protein IE9_04571 [Bacillus cereus BAG4X12-1]
gi|423507523|ref|ZP_17484091.1| hypothetical protein IG1_05065 [Bacillus cereus HD73]
gi|449091999|ref|YP_007424440.1| hypothetical protein HD73_5342 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206734927|gb|EDZ52096.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228590231|gb|EEK48099.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus ATCC
10876]
gi|228602165|gb|EEK59656.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
172560W]
gi|228700654|gb|EEL53177.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock4-2]
gi|228710439|gb|EEL62412.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
F65185]
gi|228804373|gb|EEM50984.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363617338|gb|EHL68737.1| hypothetical protein HMPREF1014_04639 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401109711|gb|EJQ17633.1| hypothetical protein IE5_04785 [Bacillus cereus BAG3X2-2]
gi|401117843|gb|EJQ25678.1| hypothetical protein IE9_04571 [Bacillus cereus BAG4X12-1]
gi|402443804|gb|EJV75698.1| hypothetical protein IG1_05065 [Bacillus cereus HD73]
gi|449025756|gb|AGE80919.1| hypothetical protein HD73_5342 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 159
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|330999739|ref|ZP_08323447.1| YbaK/proline--tRNA ligase associated domain protein [Parasutterella
excrementihominis YIT 11859]
gi|329573901|gb|EGG55481.1| YbaK/proline--tRNA ligase associated domain protein [Parasutterella
excrementihominis YIT 11859]
Length = 198
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMK 71
L+ I F H + T E K G K L +K+KK +F++ + + + K
Sbjct: 40 LRTHNIPFKALNHLPITTCEEGLKIAKEFGSTCCKTLLVKNKK-QFFLFVIPGEERFNAK 98
Query: 72 VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
+ L L A E + ++ G+V+ L+ + ++++L +D E
Sbjct: 99 QAAA--FLKSSHLSFASPEDLSRLMHTFPGAVSLLGLIFDQNKEISLYIDSRILNAEHID 156
Query: 132 FHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLEANPAVGKDQ 174
HP +ND S+ L+ D L+KFL S+G +Y + ++ G+ +
Sbjct: 157 CHPCTNDRSLILSVKDVLEKFLPSLG--VSYFEFQSGSLNGESK 198
>gi|299144481|ref|ZP_07037560.1| putative YbaK/prolyl-tRNA synthetase associated region
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517569|gb|EFI41309.1| putative YbaK/prolyl-tRNA synthetase associated region
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 165
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIG---GGLSKNLFLKDKKHR-FYIVSALADTK 67
L I + +++H + T+ +GN+ G KNL LK+KK + Y + +
Sbjct: 16 LDKYNISYVRFDHEPIETL------IGNLNLVEGQQVKNLVLKNKKAKNIYFIIIEESKE 69
Query: 68 VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQ 127
+++ L +++G + L A E + E LK + +VTP L + + V +L+D
Sbjct: 70 LNISELGEKIG--EKRLSFASLENLDEYLKCKVSAVTPLGLFYDENKKVKVLIDDSLDIN 127
Query: 128 ERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 165
HP N ++++ DL +F + + +++++
Sbjct: 128 TTLGIHPFINTTTLNIEFKDLLRFFDELEVEYEFINMD 165
>gi|152977248|ref|YP_001376765.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Bacillus cytotoxicus NVH 391-98]
gi|152026000|gb|ABS23770.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cytotoxicus
NVH 391-98]
Length = 158
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+++++ L + ++EH V+ E +G G SK+LFLK K + +Y+ +
Sbjct: 3 EEVISLLHKTNASYEKFEHEPVLDYETDRVVRERLGLQGVPSKSLFLKSKSNSYYVFFTI 62
Query: 64 ADTKVDMK----VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++D + Q L L +P+E + +P G V PF + DV ++
Sbjct: 63 EGTRLDQSKIKAITGQHLSL------CSPDELREQTGCIP-GCVAPFGY----SADVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
+D ++ P D +I L+T +L K L +
Sbjct: 112 VDSSVYNYDKILISPGVPDFTIELSTEELKKILST 146
>gi|255308484|ref|ZP_05352655.1| putative regulatory protein [Clostridium difficile ATCC 43255]
gi|423080782|ref|ZP_17069399.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
gi|423087183|ref|ZP_17075572.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|357545121|gb|EHJ27101.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 050-P50-2011]
gi|357552271|gb|EHJ34045.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
difficile 002-P50-2011]
Length = 160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVG---NIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
LK+ I F +Y+H +++ E +AK + G SK+LF+KD+ +YI K+
Sbjct: 9 LKENHITFEEYDHEPILSFE-KAKEIREKLQYTGVESKSLFIKDRSGNYYIFVTTEGKKL 67
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D K + LG G + + +E + + + G V+PF ++++L++D+ +
Sbjct: 68 DPKTIKNVLG---GKVSICSKEELTQKTQCLPGCVSPFGY----EKNISLVIDQDIFNHD 120
Query: 129 RCFFHP 134
+ F P
Sbjct: 121 KIIFSP 126
>gi|257878513|ref|ZP_05658166.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257894842|ref|ZP_05674495.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|257812741|gb|EEV41499.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257831221|gb|EEV57828.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
Length = 157
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 10 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ E+ F P
Sbjct: 70 KIVG---KRLSIVSSEHMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLLNEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 123 GRPDQTMVIQTVDLNKIIQ 141
>gi|347520699|ref|YP_004778270.1| hypothetical protein LCGT_0093 [Lactococcus garvieae ATCC 49156]
gi|385832062|ref|YP_005869837.1| hypothetical protein [Lactococcus garvieae Lg2]
gi|343179267|dbj|BAK57606.1| conserved hypothetical protein [Lactococcus garvieae ATCC 49156]
gi|343181215|dbj|BAK59553.1| conserved hypothetical protein [Lactococcus garvieae Lg2]
Length = 163
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
+ +L+I + EHPA + E +Y+ G SK L L +KK +FY+V +V+M
Sbjct: 11 MAELEIPYKIVEHPASHSTEESDQYIEGHEGCRSKTLVLANKKSTQFYMVIMDDSKRVEM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L + LG+ + L EE + +L + G V+ + LV+ ++ + D+ +
Sbjct: 71 NKLGEILGVNR--LHFVSEERLESMLGLQPGIVSLYGLVDNKMDNMHVYFDREMLEEHDI 128
Query: 131 F-FHPLSNDMSISLNTNDLDKFL 152
HP N +I D K L
Sbjct: 129 MTLHPNDNTKTIFFPIEDCFKIL 151
>gi|294618138|ref|ZP_06697732.1| putative regulatory protein [Enterococcus faecium E1679]
gi|424964686|ref|ZP_18378758.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1190]
gi|424975097|ref|ZP_18388285.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1137]
gi|424981866|ref|ZP_18394567.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV99]
gi|425021187|ref|ZP_18431460.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C497]
gi|425023338|ref|ZP_18433465.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C1904]
gi|425044696|ref|ZP_18448835.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 510]
gi|425052702|ref|ZP_18456292.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 506]
gi|431541996|ref|ZP_19518225.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1731]
gi|431653482|ref|ZP_19523825.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1904]
gi|431754911|ref|ZP_19543571.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2883]
gi|431767289|ref|ZP_19555743.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1321]
gi|291595606|gb|EFF26905.1| putative regulatory protein [Enterococcus faecium E1679]
gi|402946088|gb|EJX64390.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1190]
gi|402954742|gb|EJX72333.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium P1137]
gi|402962428|gb|EJX79369.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium ERV99]
gi|403007587|gb|EJY21152.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C497]
gi|403010189|gb|EJY23581.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium C1904]
gi|403029003|gb|EJY40784.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 510]
gi|403033286|gb|EJY44796.1| YbaK/proline--tRNA ligase associated domain protein [Enterococcus
faecium 506]
gi|430593043|gb|ELB31030.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1731]
gi|430600744|gb|ELB38376.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1904]
gi|430618739|gb|ELB55580.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E2883]
gi|430631093|gb|ELB67423.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1321]
Length = 160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ E+ F P
Sbjct: 73 KIVG---KRLSIVSSEHMEEQTGQKQGAVSPFG----YEKQIPIIIDEELLLNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|228923705|ref|ZP_04086983.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228942141|ref|ZP_04104681.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228975070|ref|ZP_04135629.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981710|ref|ZP_04142005.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis Bt407]
gi|384189083|ref|YP_005574979.1| DNA-binding protein [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410677415|ref|YP_006929786.1| DNA-binding protein [Bacillus thuringiensis Bt407]
gi|423583164|ref|ZP_17559275.1| hypothetical protein IIA_04679 [Bacillus cereus VD014]
gi|423634154|ref|ZP_17609807.1| hypothetical protein IK7_00563 [Bacillus cereus VD156]
gi|452201490|ref|YP_007481571.1| aminoacyl-tRNA editing enzymes YbaK-like, ProX-like protein
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228777822|gb|EEM26094.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis Bt407]
gi|228784591|gb|EEM32611.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228817475|gb|EEM63560.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228835834|gb|EEM81197.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|326942792|gb|AEA18688.1| DNA-binding protein [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401209224|gb|EJR15983.1| hypothetical protein IIA_04679 [Bacillus cereus VD014]
gi|401282060|gb|EJR87965.1| hypothetical protein IK7_00563 [Bacillus cereus VD156]
gi|409176544|gb|AFV20849.1| DNA-binding protein [Bacillus thuringiensis Bt407]
gi|452106883|gb|AGG03823.1| aminoacyl-tRNA editing enzymes YbaK-like, ProX-like protein
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 159
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|149192406|ref|ZP_01870605.1| hypothetical DNA-binding protein [Vibrio shilonii AK1]
gi|148833753|gb|EDL50791.1| hypothetical DNA-binding protein [Vibrio shilonii AK1]
Length = 167
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 9 LARLKDLQIEFSQYEHPAVM---TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
+A L + I F+Q++H ++ T E AK +G G SK+LFLK K F + D
Sbjct: 12 VALLNEHAISFNQWQHEPILDFATDERIAKELGWTGTH-SKSLFLKKKGGGFALFLTDKD 70
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
T++D +L Q +G + E M E + G+V P L E + +++DK
Sbjct: 71 TRLDKALLKQAVG---KRTSICSNEDMTEQIGCVPGAVCPIGLPEE----IMIVVDKALF 123
Query: 126 AQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
+ + + P + + L+ DL + L + D +D++ A
Sbjct: 124 SAQEVLYTPGLPEWTFGLSGADLKRVLFLLPNDIIELDMKKGEA 167
>gi|229094074|ref|ZP_04225158.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-42]
gi|228689286|gb|EEL43105.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-42]
Length = 159
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ DMK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGDMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|42784154|ref|NP_981401.1| hypothetical protein BCE_5108 [Bacillus cereus ATCC 10987]
gi|402554915|ref|YP_006596186.1| hypothetical protein BCK_10405 [Bacillus cereus FRI-35]
gi|42740085|gb|AAS44009.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|401796125|gb|AFQ09984.1| hypothetical protein BCK_10405 [Bacillus cereus FRI-35]
Length = 159
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423386479|ref|ZP_17363734.1| hypothetical protein ICE_04224 [Bacillus cereus BAG1X1-2]
gi|423527192|ref|ZP_17503637.1| hypothetical protein IGE_00744 [Bacillus cereus HuB1-1]
gi|401632446|gb|EJS50233.1| hypothetical protein ICE_04224 [Bacillus cereus BAG1X1-2]
gi|402454355|gb|EJV86148.1| hypothetical protein IGE_00744 [Bacillus cereus HuB1-1]
Length = 159
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK FY+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSTSGNFYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
++ +MK + +RL L +P+E +E P G V PF +++V ++
Sbjct: 63 EGNRLNRGEMKEITGERLSL------CSPDELRMETGCTP-GCVAPFGY----SQEVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSSVYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|323498709|ref|ZP_08103698.1| putative DNA-binding protein [Vibrio sinaloensis DSM 21326]
gi|323316225|gb|EGA69247.1| putative DNA-binding protein [Vibrio sinaloensis DSM 21326]
Length = 160
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADT 66
LA + L IE++Q+ H ++ K +G G SK+LFLK K + + DT
Sbjct: 12 LALFETLGIEYNQWTHEPILDFATDEKVALELGWSGTHSKSLFLKLKGGGYALYLTDKDT 71
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
++D K + LG + + +E M E+ G+V+PF L V +++D
Sbjct: 72 RLDSKAIKSALG---KRVSIVSDEEMTEVTGCVPGAVSPFDL----PEAVTIVVDTRLYQ 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+ P D +I L +L + L +
Sbjct: 125 HREILYTPGYPDRTIGLPATELPRILAQL 153
>gi|406919238|gb|EKD57584.1| hypothetical protein ACD_57C00221G0001 [uncultured bacterium]
Length = 601
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVG-NIGGGLSKNLFLKDKKHRFYIVSALA 64
+ +L LK +IE+ YEH V T E AK G NI G +K L L+ K F + A
Sbjct: 454 EAILDLLKAKKIEYKHYEHKPVFTSEESAKVRGTNIHQG-AKALVLQAGK-EFILYVLPA 511
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D K +++ + ++LG+ + L MA +E++ + + +GSV P S ++ +D
Sbjct: 512 DFKAELEAIREKLGIER--LVMASKESVKAKIGLEIGSVPPLG----SVINLKTHVDSRL 565
Query: 125 KAQERCFFHPLSNDMSISLNTNDLDKF 151
E F+ +D SI + +D K
Sbjct: 566 SENEEIAFNAGRHDRSIKMKYSDFIKL 592
>gi|228988213|ref|ZP_04148310.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771510|gb|EEM19979.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 159
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGNYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P E E P G V PF ++ VA+++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPNELREETGCTP-GCVAPFGY----SQHVAIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
D ++ P + +I L+T +L K L
Sbjct: 113 DSAIYTHDKILITPGVPEFTIELSTEELKKIL 144
>gi|315650765|ref|ZP_07903817.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486972|gb|EFU77302.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
Length = 196
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L ++ +E+ +H +E + G +G + KN+ L +++ F++ D K
Sbjct: 42 LDNIGVEYEVVDHDEASNMEKCREIEGALGVKICKNIVLCNRQETVFFLFMMPGDKKYVT 101
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
+ +S++L + + L A E + E L V GSV+ L+N+ V L++D +
Sbjct: 102 RDISKKLEVSR--LSFAKENYLKEFLDVTPGSVSVLGLLNDKDNRVDLVIDSDVIKADFI 159
Query: 131 FFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDLE 165
HP N ++ + T D L+K + ++ ++ +D E
Sbjct: 160 RCHPCVNTSTLKIATTDFLNKVIPALNKEAKIIDNE 195
>gi|406930729|gb|EKD66065.1| hypothetical protein ACD_49C00067G0051 [uncultured bacterium (gcode
4)]
Length = 170
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 1 MAYSKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGN--IGGGLSKNLFLKDKKHRFY 58
M + ++ LKDL IEF Q EH + + ++ + SKN+ K FY
Sbjct: 1 MTQNYQNIIKILKDLNIEFEQIEHEVSKSCDDSKRFRDEKWLVWLWSKNIIFH-AKWNFY 59
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V D ++ K + + +R + ++ + +L + S+ PF N + + +
Sbjct: 60 LVVTHWDKQI--KARNFKREFWSKDIRFSSQDEITPLLWATIWSIPPFGFDNST---IKI 114
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAY 161
+DK E F+P SI + + DL K +++ + Y
Sbjct: 115 FVDKEIFESEYFIFNPSVPTKSIRIKSTDLRKIYENLENEIKY 157
>gi|218677469|ref|ZP_03525366.1| YbaK/prolyl-tRNA synthetase associated region [Rhizobium etli CIAT
894]
Length = 70
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 101 GSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDP 159
G+VT F +N++A +V +LD +E HPLSND + S+ DL +F+++ G P
Sbjct: 5 GAVTAFGAINDTAGNVTFVLDADLMREEIVNCHPLSNDATTSIAGGDLIRFMEATGHKP 63
>gi|126701077|ref|YP_001089974.1| nucleotide-binding protein [Clostridium difficile 630]
gi|115252514|emb|CAJ70357.1| putative nucleotide-binding protein [Clostridium difficile 630]
Length = 160
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVG---NIGGGLSKNLFLKDKKHRFYIVSALADTKV 68
LK+ I F +Y+H +++ E +AK + G SK+LF+KD+ +YI K+
Sbjct: 9 LKENHITFEEYDHEPILSFE-KAKEIREKLQYTGVESKSLFIKDRSGNYYIFVTTEGKKL 67
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D K + LG G + + +E + + + G V+PF ++++L++D+ +
Sbjct: 68 DPKTIKNVLG---GKVSICSKEELTQKTQCLPGCVSPFGY----EKNISLVIDQDIFNHD 120
Query: 129 RCFFHP 134
+ F P
Sbjct: 121 KIIFLP 126
>gi|431497606|ref|ZP_19514760.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1634]
gi|430588541|gb|ELB26733.1| YbaK/prolyl-tRNA synthetase-associated protein [Enterococcus
faecium E1634]
Length = 160
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F + H A+ T E K G +K+LFLKDKK Y+ + D K L
Sbjct: 13 IYFELHHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDKKDNNYVYLTFTTKQTDFKALG 72
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 73 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 125
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 126 GRPDQTMVIQTVDLNKIIQ 144
>gi|260767447|ref|ZP_05876384.1| putative DNA-binding protein [Vibrio furnissii CIP 102972]
gi|260617559|gb|EEX42741.1| putative DNA-binding protein [Vibrio furnissii CIP 102972]
Length = 161
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADT 66
+A L + F Q++H ++ K +G G +K+LFLK K + ++ D
Sbjct: 12 VALLHQAGVPFQQWQHEPILDFATDEKVAQELGWTGTHTKSLFLKLKGGGYALLFTEKDA 71
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
++D K + +G + +E M E+ + G+V PF L + + +++D
Sbjct: 72 RLDAKAIKALIGKRP---SICSDEEMTEVTRCLPGAVGPFVL----PQAIPVIVDPALLH 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSI 155
++ F P +++ + DLDK L +I
Sbjct: 125 KQELLFTPGHPHLTLGFSGADLDKLLANI 153
>gi|423411247|ref|ZP_17388367.1| hypothetical protein IE1_00551 [Bacillus cereus BAG3O-2]
gi|423432968|ref|ZP_17409972.1| hypothetical protein IE7_04784 [Bacillus cereus BAG4O-1]
gi|401108263|gb|EJQ16195.1| hypothetical protein IE1_00551 [Bacillus cereus BAG3O-2]
gi|401113219|gb|EJQ21089.1| hypothetical protein IE7_04784 [Bacillus cereus BAG4O-1]
Length = 159
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K +
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIV 144
>gi|166030448|ref|ZP_02233277.1| hypothetical protein DORFOR_00109 [Dorea formicigenerans ATCC
27755]
gi|166029806|gb|EDR48563.1| YbaK/proline--tRNA ligase associated domain protein [Dorea
formicigenerans ATCC 27755]
Length = 179
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALAD 65
++ L L+I + + ++ ++E A+ +G + KN+FL KK F+++ A+
Sbjct: 22 RMYETLDKLKIPYERVDNDPAASMEECAEVDKVLGTEIRKNVFLCNQKKTTFFLLVMPAN 81
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
D S++LG+ + AP E ML+ L GS + L+ + V +++DK
Sbjct: 82 KSFDTAAFSKKLGVSH--MSFAPPEKMLKHLGTTPGSASVAGLLVDEDDYVQVIVDKEVA 139
Query: 126 AQERCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
E +P N + T D L KFL I VDL
Sbjct: 140 ESEWFGCNPGINTSHLKFKTQDLLQKFLPKIHHRARIVDL 179
>gi|256847015|ref|ZP_05552461.1| predicted protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715679|gb|EEU30654.1| predicted protein [Lactobacillus coleohominis 101-4-CHN]
Length = 186
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLS-KNLFLKDKKHR-FYIVSALADTKVD 69
L L+I++ + ++ T E + + G L KNL DK HR +Y+V L + D
Sbjct: 29 LDKLKIKYQRVDYNFYPTTEVGKELITETLGTLDIKNLVFNDKHHRHYYLVVMLKKQRFD 88
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K LGK + M+ + + +L G+++ L+ + A V + A +
Sbjct: 89 QKAFRNAFHLGK--ITMSSADDLKNVLNSHPGAISITELMYDQAGQVGVYFQSDVLATKY 146
Query: 130 CFFHPLSNDMSISLNTNDL 148
FHP N ++ ++T DL
Sbjct: 147 FRFHPNENHATLRISTEDL 165
>gi|375132053|ref|YP_004994153.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|315181227|gb|ADT88141.1| hypothetical DNA-binding protein [Vibrio furnissii NCTC 11218]
Length = 161
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADT 66
+A L + F Q++H ++ K +G G +K+LFLK K + ++ D
Sbjct: 12 VALLHQAGVPFQQWQHEPILDFATDEKVARELGWTGTHTKSLFLKLKGGGYALLFTEKDA 71
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
++D K + +G + +E M E+ + G+V PF L + + +++D
Sbjct: 72 RLDAKAIKALIGKRP---SICSDEEMTEVTRCLPGAVGPFVL----PQAIPVIVDPALLH 124
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFLKSI 155
++ F P +++ + DLDK L +I
Sbjct: 125 KQELLFTPGHPHLTLGFSGADLDKLLANI 153
>gi|423130525|ref|ZP_17118200.1| hypothetical protein HMPREF9714_01600 [Myroides odoratimimus CCUG
12901]
gi|371645108|gb|EHO10636.1| hypothetical protein HMPREF9714_01600 [Myroides odoratimimus CCUG
12901]
Length = 179
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-KHRFYIVSAL 63
++Q L L +++ + E +T+E + + K LFL ++ K FY+ L
Sbjct: 20 QEQTYDTLSKLSMDWQRVETEEAITMEDCLLINERLDMNMVKTLFLCNRQKTMFYLFITL 79
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D + KV S+ LG+ + + AP E + E ++ +G+ + F L+ ES ++ L+ D+
Sbjct: 80 GDKPFNSKVFSEALGISR--VSFAPAEMLYEKMETKVGAASIFGLLRESTSNIQLVFDQD 137
Query: 124 FKAQERCFFHPLSNDMS---ISLNTND-LDKFLKSIGRDPAYVDL 164
Q F+ S+ + + L+T D ++K + + RD + L
Sbjct: 138 VLDQP---FYGCSDGTTTHYLKLHTTDIINKLVPFLNRDLLTIKL 179
>gi|301056459|ref|YP_003794670.1| DNA-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|300378628|gb|ADK07532.1| probable DNA-binding protein [Bacillus cereus biovar anthracis str.
CI]
Length = 159
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLNYETDRIVRERLGLQGTPSKSLFLKSKSGNYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNTIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|313884136|ref|ZP_07817902.1| YbaK/proline--tRNA ligase associated domain protein [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620583|gb|EFR32006.1| YbaK/proline--tRNA ligase associated domain protein [Eremococcus
coleocola ACS-139-V-Col8]
Length = 161
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 10 ARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKH-RFYIVSALADT 66
A L+ +I+F Y H + T E G G +K LF+K KK R+YI+ L D
Sbjct: 7 ADLQAARIDFELYHHSPMYTYEESLAMKAEKGFTGTETKALFMKGKKDGRYYILFTLPDK 66
Query: 67 KVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKA 126
+ D K L + +G + ++PEE E + G+V P E V L+ +
Sbjct: 67 RNDFKYLKKLVG--QKLSVVSPEELETETGQES-GAVCPIGYPAE----VGQLIHEDILK 119
Query: 127 QERCFFHPLSNDMSISLNTNDLDKFL 152
E+ F P D ++ + T DLDK L
Sbjct: 120 AEKLVFAPGRPDQTMVIKTQDLDKIL 145
>gi|423554556|ref|ZP_17530882.1| hypothetical protein IGW_05186 [Bacillus cereus ISP3191]
gi|401180852|gb|EJQ88008.1| hypothetical protein IGW_05186 [Bacillus cereus ISP3191]
Length = 159
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLNYETDRIVRERLGLQGTPSKSLFLKSKSGNYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K +
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKII 144
>gi|300123548|emb|CBK24820.2| unnamed protein product [Blastocystis hominis]
gi|300123585|emb|CBK24857.2| unnamed protein product [Blastocystis hominis]
Length = 106
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+V A DT VD+K L+ L G LR A + + +L V G ++ FA +N+ V +
Sbjct: 1 MVVAAFDTAVDIKKLTSELKYKSGSLRFADNQLLETMLGVQQGHLSLFAKINDPDNKVKV 60
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKF 151
++DK + HPL N S ++ D F
Sbjct: 61 IIDKRLMEAKTVSLHPLINTASTIISGEDFKYF 93
>gi|228929995|ref|ZP_04093006.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228829675|gb|EEM75301.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 159
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTEERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|210623699|ref|ZP_03293983.1| hypothetical protein CLOHIR_01933 [Clostridium hiranonis DSM 13275]
gi|210153387|gb|EEA84393.1| hypothetical protein CLOHIR_01933 [Clostridium hiranonis DSM 13275]
Length = 163
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDMKVLSQRLGLGKGGLRMA 87
TVE A+ VG I ++K L + K+ IV A DTK+D K RM
Sbjct: 28 TVELAAETVGIIPARVAKTLSFRGKEDGEAIIVVAAGDTKIDNKKFRHEFSCKA---RML 84
Query: 88 PEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTND 147
E +E +G V PFAL NE +V + LD+ K + F S + +I L ++
Sbjct: 85 SAEEAVEFTGHMVGGVCPFALENE---NVKVYLDESLKRFDTVFPAAGSGNSAIELTNDE 141
Query: 148 LDKF 151
L+K+
Sbjct: 142 LEKY 145
>gi|30265010|ref|NP_847387.1| hypothetical protein BA_5204 [Bacillus anthracis str. Ames]
gi|47530511|ref|YP_021860.1| hypothetical protein GBAA_5204 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187829|ref|YP_031082.1| hypothetical protein BAS4839 [Bacillus anthracis str. Sterne]
gi|65316962|ref|ZP_00389921.1| COG3760: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|118480055|ref|YP_897206.1| hypothetical protein BALH_4503 [Bacillus thuringiensis str. Al
Hakam]
gi|165870854|ref|ZP_02215506.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167634878|ref|ZP_02393196.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639923|ref|ZP_02398191.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170685843|ref|ZP_02877066.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170707072|ref|ZP_02897529.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177652212|ref|ZP_02934715.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190567211|ref|ZP_03020126.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|196032839|ref|ZP_03100252.1| conserved hypothetical protein [Bacillus cereus W]
gi|218906163|ref|YP_002453997.1| hypothetical protein BCAH820_5075 [Bacillus cereus AH820]
gi|225866941|ref|YP_002752319.1| hypothetical protein BCA_5103 [Bacillus cereus 03BB102]
gi|227817741|ref|YP_002817750.1| hypothetical protein BAMEG_5261 [Bacillus anthracis str. CDC 684]
gi|228917597|ref|ZP_04081141.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228936268|ref|ZP_04099067.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948694|ref|ZP_04110972.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229124507|ref|ZP_04253692.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
95/8201]
gi|229187207|ref|ZP_04314352.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus BGSC
6E1]
gi|229601238|ref|YP_002869211.1| hypothetical protein BAA_5240 [Bacillus anthracis str. A0248]
gi|254687303|ref|ZP_05151160.1| hypothetical protein BantC_26148 [Bacillus anthracis str.
CNEVA-9066]
gi|254725315|ref|ZP_05187098.1| hypothetical protein BantA1_23122 [Bacillus anthracis str. A1055]
gi|254735360|ref|ZP_05193068.1| hypothetical protein BantWNA_09377 [Bacillus anthracis str. Western
North America USA6153]
gi|254740627|ref|ZP_05198318.1| hypothetical protein BantKB_06345 [Bacillus anthracis str. Kruger
B]
gi|254753111|ref|ZP_05205147.1| hypothetical protein BantV_11596 [Bacillus anthracis str. Vollum]
gi|254761453|ref|ZP_05213474.1| hypothetical protein BantA9_24329 [Bacillus anthracis str.
Australia 94]
gi|386738841|ref|YP_006212022.1| DNA-binding protein [Bacillus anthracis str. H9401]
gi|421507915|ref|ZP_15954832.1| DNA-binding protein [Bacillus anthracis str. UR-1]
gi|30259687|gb|AAP28873.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47505659|gb|AAT34335.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181756|gb|AAT57132.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|118419280|gb|ABK87699.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|164713363|gb|EDR18888.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512004|gb|EDR87382.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167529628|gb|EDR92377.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128175|gb|EDS97045.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170670307|gb|EDT21047.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082218|gb|EDT67284.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190561715|gb|EDV15685.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|195994268|gb|EDX58223.1| conserved hypothetical protein [Bacillus cereus W]
gi|218535474|gb|ACK87872.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786148|gb|ACO26365.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227007589|gb|ACP17332.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228596217|gb|EEK53892.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus BGSC
6E1]
gi|228658847|gb|EEL14502.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
95/8201]
gi|228811001|gb|EEM57344.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823384|gb|EEM69217.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228842077|gb|EEM87180.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229265646|gb|ACQ47283.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|384388693|gb|AFH86354.1| DNA-binding protein [Bacillus anthracis str. H9401]
gi|401822021|gb|EJT21174.1| DNA-binding protein [Bacillus anthracis str. UR-1]
Length = 159
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|20808219|ref|NP_623390.1| hypothetical protein TTE1802 [Thermoanaerobacter tengcongensis MB4]
gi|20516814|gb|AAM24994.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 153
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDM 70
R + + +E +E + TVE A+ +G G ++K++ K K +V+A D ++D
Sbjct: 13 RSRGINLEVKIFEDTS--TVEKAAESLGVTPGEIAKSMLFKLKDKYIMVVTA-GDKRIDN 69
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVN--ESARDVALLLDKGFKAQE 128
K + K +MA E +LE+ P+G V P+ L N E D++L +E
Sbjct: 70 KKFKETF---KAKAKMASPEEVLEVTGHPVGGVCPYGLKNPVEVYYDISL--------KE 118
Query: 129 RCFFHPLSNDM--SISLNTNDLDKFLK 153
+P + D+ ++ + DLDK ++
Sbjct: 119 YEIVYPAAGDVNAAVEVKVEDLDKIVE 145
>gi|229020209|ref|ZP_04176982.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1273]
gi|229026436|ref|ZP_04182793.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1272]
gi|423388729|ref|ZP_17365955.1| hypothetical protein ICG_00577 [Bacillus cereus BAG1X1-3]
gi|423417106|ref|ZP_17394195.1| hypothetical protein IE3_00578 [Bacillus cereus BAG3X2-1]
gi|228734899|gb|EEL85537.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1272]
gi|228741105|gb|EEL91330.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1273]
gi|401108524|gb|EJQ16455.1| hypothetical protein IE3_00578 [Bacillus cereus BAG3X2-1]
gi|401642804|gb|EJS60510.1| hypothetical protein ICG_00577 [Bacillus cereus BAG1X1-3]
Length = 159
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGEYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ GK +P+E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GKNLSLCSPDELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D + P + +I L+T +L + L +
Sbjct: 113 DSSIYTYNKILITPGVPEFTIELSTEELKRILST 146
>gi|346306442|ref|ZP_08848598.1| hypothetical protein HMPREF9457_00307 [Dorea formicigenerans
4_6_53AFAA]
gi|345897816|gb|EGX67713.1| hypothetical protein HMPREF9457_00307 [Dorea formicigenerans
4_6_53AFAA]
Length = 178
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFL-KDKKHRFYIVSALAD 65
++ L +I + + ++ ++E A+ +G + KN+FL KK F+++ A+
Sbjct: 21 RMYETLDKWRIPYERVDNDPAASMEECAEVDKVLGTEIRKNVFLCNQKKTTFFLLVMPAN 80
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
D S++LG+ + AP E ML+ L GS + L+ + V +++DK
Sbjct: 81 KSFDTAAFSKKLGVSH--MSFAPPEKMLKHLGTTPGSASVAGLLVDEDDYVQVIVDKEVA 138
Query: 126 AQERCFFHPLSNDMSISLNTND-LDKFLKSIGRDPAYVDL 164
E +P N + T D L KFL I VDL
Sbjct: 139 ESEWFGCNPGINTSHLKFKTQDLLQKFLPKIHHRARIVDL 178
>gi|229199119|ref|ZP_04325802.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1293]
gi|423573354|ref|ZP_17549473.1| hypothetical protein II9_00575 [Bacillus cereus MSX-D12]
gi|423608683|ref|ZP_17584575.1| hypothetical protein IIK_05263 [Bacillus cereus VD102]
gi|228584390|gb|EEK42525.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
m1293]
gi|401214901|gb|EJR21622.1| hypothetical protein II9_00575 [Bacillus cereus MSX-D12]
gi|401237318|gb|EJR43773.1| hypothetical protein IIK_05263 [Bacillus cereus VD102]
Length = 159
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGDYYVFFTL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
T+++ + + G L + + + + G V PF A DV +++D
Sbjct: 63 EGTRLNRGEMKELTG---ERLSLCSADELRDKTGCTPGCVAPFGY----AHDVTIIVDNA 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFL 152
++ P + +I L+T +L K L
Sbjct: 116 IYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|268611078|ref|ZP_06144805.1| prolyl-tRNA synthetase / glutamyl-tRNA synthetase [Ruminococcus
flavefaciens FD-1]
Length = 121
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 53 KKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNES 112
+K FY++ D K L+ +L + L A + M E L GSV+ L+ ++
Sbjct: 9 QKTSFYMLLMPGDKPFKAKFLTSQLNCAR--LSFAEADKMQEYLHTIPGSVSALELIYDT 66
Query: 113 ARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
++ L++DK E HP N ++ L +D+ ++++ +P ++DL
Sbjct: 67 DNNIQLIIDKDLMKDEYICGHPGINTSTVRLLRDDMMRYVRETKHEPTFIDL 118
>gi|229032612|ref|ZP_04188576.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1271]
gi|228728697|gb|EEL79709.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH1271]
Length = 160
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGDYYVFFTL 62
Query: 64 ADTKV---DMK-VLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK + +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKEITGERLSL------CSPDELQDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423613130|ref|ZP_17588990.1| hypothetical protein IIM_03844 [Bacillus cereus VD107]
gi|401242692|gb|EJR49065.1| hypothetical protein IIM_03844 [Bacillus cereus VD107]
Length = 159
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGEYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D + P + +I L+T +L K L +
Sbjct: 113 DSSIYTYNKILITPGVPEFTIELSTEELKKILST 146
>gi|376268875|ref|YP_005121587.1| Aminoacyl-tRNA editing like protein [Bacillus cereus F837/76]
gi|364514675|gb|AEW58074.1| Aminoacyl-tRNA editing like protein [Bacillus cereus F837/76]
Length = 159
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ ++A L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVIALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|89076724|ref|ZP_01163010.1| putative DNA-binding protein [Photobacterium sp. SKA34]
gi|89047623|gb|EAR53232.1| putative DNA-binding protein [Photobacterium sp. SKA34]
Length = 160
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADTKV 68
RLK L I + +++H +++ E K +G G +K++F+K K H + + D+++
Sbjct: 14 RLKSLAIPYREWDHESILDFETDQKVAARLGWTGVHTKSIFMKFKDHGYALYLTDKDSRM 73
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D K + +G + E M E L G+V P L VA+++D A E
Sbjct: 74 DSKKIKMLIGKRPS---ICNGEEMTEQLGCLPGAVCPAGL----PEHVAIIIDSSLYACE 126
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKS 154
+ P +++ + L + L S
Sbjct: 127 ELLYTPGIPEITFGVAGKHLKQLLGS 152
>gi|52140560|ref|YP_086269.1| DNA-binding protein [Bacillus cereus E33L]
gi|51974029|gb|AAU15579.1| probable DNA-binding protein [Bacillus cereus E33L]
Length = 159
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T L K L
Sbjct: 112 VDNAIYTYDKILITPGVPEFTIELSTEKLKKIL 144
>gi|423462220|ref|ZP_17439016.1| hypothetical protein IEI_05359 [Bacillus cereus BAG5X2-1]
gi|401133491|gb|EJQ41120.1| hypothetical protein IEI_05359 [Bacillus cereus BAG5X2-1]
Length = 159
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLHGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF +++V +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCTP-GCVAPFGY----SQNVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
D A ++ P + +I L+T +L K L
Sbjct: 113 DIAIYAYDKILITPGVPEFTIELSTEELKKIL 144
>gi|229062641|ref|ZP_04199950.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH603]
gi|228716611|gb|EEL68308.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH603]
Length = 159
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGNPSKSLFLKSKSGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E +P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCMP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L + L +
Sbjct: 113 DSSIYTYKKVLITPGVPEFTIELSTEELKRILST 146
>gi|229175670|ref|ZP_04303178.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus MM3]
gi|423400178|ref|ZP_17377351.1| hypothetical protein ICW_00576 [Bacillus cereus BAG2X1-2]
gi|423479125|ref|ZP_17455840.1| hypothetical protein IEO_04583 [Bacillus cereus BAG6X1-1]
gi|228607811|gb|EEK65125.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus MM3]
gi|401656805|gb|EJS74320.1| hypothetical protein ICW_00576 [Bacillus cereus BAG2X1-2]
gi|402425997|gb|EJV58137.1| hypothetical protein IEO_04583 [Bacillus cereus BAG6X1-1]
Length = 159
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLHGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF ++ V +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCTP-GCVAPFGY----SQHVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
D A ++ P + +I L+T +L K L
Sbjct: 113 DSAIYAYDKILITPGVPEFTIELSTEELKKIL 144
>gi|47567008|ref|ZP_00237725.1| DNA-binding protein [Bacillus cereus G9241]
gi|229158567|ref|ZP_04286626.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus ATCC
4342]
gi|47556326|gb|EAL14660.1| DNA-binding protein [Bacillus cereus G9241]
gi|228624881|gb|EEK81649.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus ATCC
4342]
Length = 159
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGNYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P E E P G V PF ++ VA+++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPNELREETGCTP-GCVAPFGY----SQHVAIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
D ++ P + +I L+T +L K L
Sbjct: 113 DSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|196040499|ref|ZP_03107799.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196028631|gb|EDX67238.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 159
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G + PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCLAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423484962|ref|ZP_17461651.1| hypothetical protein IEQ_04739 [Bacillus cereus BAG6X1-2]
gi|401136362|gb|EJQ43952.1| hypothetical protein IEQ_04739 [Bacillus cereus BAG6X1-2]
Length = 159
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GENLSLCSPDELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D + P + +I L+T +L K L +
Sbjct: 113 DSSIYTYNKILITPGVPEFTIELSTEELKKILST 146
>gi|423670533|ref|ZP_17645562.1| hypothetical protein IKO_04230 [Bacillus cereus VDM034]
gi|401296219|gb|EJS01839.1| hypothetical protein IKO_04230 [Bacillus cereus VDM034]
Length = 159
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPNELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L K L +
Sbjct: 113 DSSIYTYDKILITPGVPEFTIELSTEELKKILST 146
>gi|431794900|ref|YP_007221805.1| hypothetical protein Desdi_3004 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785126|gb|AGA70409.1| hypothetical protein Desdi_3004 [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 152
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 18 EFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRL 77
EF + + TV A+ +G G ++K+L LK F IV D K+D +
Sbjct: 16 EFPILKFEDISTVAKAAESLGVTPGEIAKSLLLK-VNDDFIIVMMAGDKKLDNRKFKDTF 74
Query: 78 GLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSN 137
KG +M E +LE+ P+G V PF L + + + LDK K E F +
Sbjct: 75 ---KGKAKMPALEQVLEVTGHPVGGVCPFGL----RQAIPVYLDKSLKQYEEVFPAAGAP 127
Query: 138 DMSISLNTNDLDKFLKSIGRDPA 160
D ++ L +L++ + + D A
Sbjct: 128 DAAVKLAVEELEELVATDWVDVA 150
>gi|423521156|ref|ZP_17497629.1| hypothetical protein IGC_00539 [Bacillus cereus HuA4-10]
gi|401179527|gb|EJQ86698.1| hypothetical protein IGC_00539 [Bacillus cereus HuA4-10]
Length = 159
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E +P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCMP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L + L +
Sbjct: 113 DSSIYTYKKVLITPGVPEFTIELSTEELKRILST 146
>gi|206976413|ref|ZP_03237320.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217962436|ref|YP_002341008.1| hypothetical protein BCAH187_A5113 [Bacillus cereus AH187]
gi|222098421|ref|YP_002532479.1| DNA-binding protein [Bacillus cereus Q1]
gi|229141689|ref|ZP_04270219.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-ST26]
gi|375286961|ref|YP_005107400.1| hypothetical protein BCN_4867 [Bacillus cereus NC7401]
gi|384182818|ref|YP_005568580.1| putative DNA-binding protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|423355439|ref|ZP_17333063.1| hypothetical protein IAU_03512 [Bacillus cereus IS075]
gi|423375459|ref|ZP_17352796.1| hypothetical protein IC5_04512 [Bacillus cereus AND1407]
gi|423572396|ref|ZP_17548601.1| hypothetical protein II7_05577 [Bacillus cereus MSX-A12]
gi|206745337|gb|EDZ56737.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217064285|gb|ACJ78535.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|221242480|gb|ACM15190.1| probable DNA-binding protein [Bacillus cereus Q1]
gi|228641757|gb|EEK98058.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
BDRD-ST26]
gi|324328902|gb|ADY24162.1| putative DNA-binding protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358355488|dbj|BAL20660.1| conserved hypothetical protein [Bacillus cereus NC7401]
gi|401083771|gb|EJP92026.1| hypothetical protein IAU_03512 [Bacillus cereus IS075]
gi|401092145|gb|EJQ00279.1| hypothetical protein IC5_04512 [Bacillus cereus AND1407]
gi|401197376|gb|EJR04308.1| hypothetical protein II7_05577 [Bacillus cereus MSX-A12]
Length = 159
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNVSYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGDYYVFFTL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
T+++ + + G L + + + + G V PF + DV +++D
Sbjct: 63 EGTRLNRGEMKELTG---ERLSLCSADELRDKTGCTPGCVAPFGY----SHDVTIIVDNA 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFL 152
++ P + +I L+T +L K L
Sbjct: 116 IYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423451738|ref|ZP_17428591.1| hypothetical protein IEE_00482 [Bacillus cereus BAG5X1-1]
gi|423557465|ref|ZP_17533768.1| hypothetical protein II3_02670 [Bacillus cereus MC67]
gi|401143942|gb|EJQ51475.1| hypothetical protein IEE_00482 [Bacillus cereus BAG5X1-1]
gi|401193273|gb|EJR00280.1| hypothetical protein II3_02670 [Bacillus cereus MC67]
Length = 159
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L + L +
Sbjct: 113 DSSIYTYKKVLITPGVPEFTIELSTEELKRILST 146
>gi|410088049|ref|ZP_11284746.1| hypothetical protein C790_2204 [Morganella morganii SC01]
gi|421494041|ref|ZP_15941394.1| YEAK3 [Morganella morganii subsp. morganii KT]
gi|455740235|ref|YP_007506501.1| hypothetical protein MU9_3084 [Morganella morganii subsp. morganii
KT]
gi|400191812|gb|EJO24955.1| YEAK3 [Morganella morganii subsp. morganii KT]
gi|409765354|gb|EKN49466.1| hypothetical protein C790_2204 [Morganella morganii SC01]
gi|455421798|gb|AGG32128.1| hypothetical protein MU9_3084 [Morganella morganii subsp. morganii
KT]
Length = 164
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH----RFYIVS 61
D++ L + F EHPA +A +K GN +K + L+ R+ +
Sbjct: 5 DKITRLLDSRAVSFEVIEHPAEGRSDAISKIRGNKLSQAAKAMVLQVTGSTPDIRYVLAI 64
Query: 62 ALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLD 121
D KV+ K ++ G GK APE T + P+G+V PF+ +E + L +D
Sbjct: 65 VPGDCKVNFKNAAKLAG-GKKASFAAPE-TAQALTGCPMGAVPPFSFNDE----LTLYVD 118
Query: 122 KGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEANPA 169
K R FF+ S+SL +D + IG D D+ PA
Sbjct: 119 KRLTGAGRVFFNAGELVRSVSLAADD---YFSVIGHD-RIADIAVPPA 162
>gi|90580497|ref|ZP_01236303.1| putative DNA-binding protein [Photobacterium angustum S14]
gi|90438406|gb|EAS63591.1| putative DNA-binding protein [Vibrio angustum S14]
Length = 160
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADTKV 68
RLK L I + ++EH +++ E K +G G +K++F+K K H + + D+++
Sbjct: 14 RLKSLAISYREWEHESILDFETDQKVAERLGWTGVHTKSIFMKFKGHGYALYLTDKDSRM 73
Query: 69 DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
D K + + +GK EE ++ +P G+V P L +A+++D A E
Sbjct: 74 DSKKI--KTLIGKRPSICTGEEMTAQLGCLP-GAVCPVGL----PEHIAIIIDSSLYACE 126
Query: 129 RCFFHPLSNDMSISLNTNDLDKFLKS 154
+ P +++ + L + L S
Sbjct: 127 ELLYTPGIPEITFGVAGKYLKQLLGS 152
>gi|229169695|ref|ZP_04297395.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH621]
gi|423595823|ref|ZP_17571853.1| hypothetical protein IIG_04690 [Bacillus cereus VD048]
gi|228613734|gb|EEK70859.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
AH621]
gi|401221717|gb|EJR28331.1| hypothetical protein IIG_04690 [Bacillus cereus VD048]
Length = 159
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPNELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L + L +
Sbjct: 113 DSSIYTYDKILITPGVPEFTIELSTEELKRILST 146
>gi|229088051|ref|ZP_04220106.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-44]
gi|228695253|gb|EEL48183.1| YbaK/prolyl-tRNA synthetase associated region [Bacillus cereus
Rock3-44]
Length = 158
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+++++ L + ++EH V+ E +G G SK+LFLK K +Y+ +
Sbjct: 3 EEVISLLHKTNASYEKFEHEPVLDYETDQVVRERLGLHGVPSKSLFLKSKSGSYYVFFTV 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
T+++ R G+ +P E + +P G V PF ++DV +++D+
Sbjct: 63 EGTRLERN--EMREITGEHLSICSPNELREQTGCIP-GCVAPFGY----SQDVTIIVDRA 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFL 152
++ P + +I L+T +L K L
Sbjct: 116 IYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|423471154|ref|ZP_17447898.1| hypothetical protein IEM_02460 [Bacillus cereus BAG6O-2]
gi|402432634|gb|EJV64690.1| hypothetical protein IEM_02460 [Bacillus cereus BAG6O-2]
Length = 159
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +L+ L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLSLLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGAYYVFFTL 62
Query: 64 ADTKV---DMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLL 120
T++ +MK ++ G+ +P+E E P G V PF ++DV +++
Sbjct: 63 EGTRLNRGEMKEIT-----GESLSLCSPDELREETGCTP-GCVAPFGY----SQDVTIIV 112
Query: 121 DKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
D ++ P + +I L+T +L + L +
Sbjct: 113 DSSIYTCKKVLITPGVPEFTIELSTEELKRILST 146
>gi|374288992|ref|YP_005036077.1| hypothetical protein BMS_2317 [Bacteriovorax marinus SJ]
gi|301167533|emb|CBW27116.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 157
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVG---NIGGGLSKNLFLKDK-KHRFYIVSA 62
Q+ L++ + + + +H T E AKY G +IGG K L KDK + +++S
Sbjct: 6 QIRNFLEENSVTYREVDHDIAPTCELSAKYRGESMDIGG---KTLLFKDKVGFKLFVIS- 61
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
A +VD + R LG LR A E+ ++++ V G++ PF +D L +D+
Sbjct: 62 -ASLQVDSNKV--RKILGSQRLRFASEKELMDLCGVVKGALPPFG---RPLQDFDLYIDE 115
Query: 123 GFKAQERCFFHPLSNDMSISLNTNDLDKFLK 153
ER F+ S +N ND K ++
Sbjct: 116 SIFRNERIAFNAGILTKSFIMNMNDYKKLVE 146
>gi|19112954|ref|NP_596162.1| cytoplasmic proline-tRNA ligase Prs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582353|sp|O60155.1|YHY6_SCHPO RecName: Full=Putative proline--tRNA ligase C19C7.06; AltName:
Full=Prolyl-tRNA synthetase; Short=ProRS
gi|3218410|emb|CAA19574.1| cytoplasmic proline-tRNA ligase Prs1 (predicted)
[Schizosaccharomyces pombe]
Length = 716
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 43 GLSKNLFLKDKKHRF-----YIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILK 97
L+K + LK K + I++AL T + ++ +G + RMA + + E+
Sbjct: 46 ALTKTIVLKPKTAKSQTVVPIILAALETTSTPSGIAAKAVGSKEA--RMAAADLVEEVFG 103
Query: 98 VPLGSVTPFALVNESARDVALLLDKGFKAQERCF-FHPLSNDMSISLNTNDLDKFLKSIG 156
+P V F++ E+A V ++LD FHP S+ ++ ++ + +LKS+G
Sbjct: 104 IPPTDVGIFSVNKENASKVHVVLDAALIQHNGLLAFHPSSSAKTVFVSPAAVQTYLKSVG 163
Query: 157 RDPAYVDLEA 166
+P VD A
Sbjct: 164 VNPIIVDFSA 173
>gi|410457885|ref|ZP_11311651.1| YbaK/prolyl-tRNA synthetase associated protein [Bacillus
azotoformans LMG 9581]
gi|409932005|gb|EKN68975.1| YbaK/prolyl-tRNA synthetase associated protein [Bacillus
azotoformans LMG 9581]
Length = 166
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A+ +G I ++K L + + + ++ A D K+D K Q G RM
Sbjct: 28 TVEQAAETIGVIPARIAKTLSFRGEDEKAILIVAAGDAKIDNKKFRQTFGFKA---RMLT 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ +LE +G V PF L N D+ + LD K E F S + +I L ++
Sbjct: 85 PDEVLEQTGHAIGGVCPFGLAN----DLDVYLDVSMKRFETVFPACGSTNSAIELTIEEI 140
Query: 149 DKF 151
++
Sbjct: 141 VQY 143
>gi|441504400|ref|ZP_20986394.1| putative DNA-binding protein [Photobacterium sp. AK15]
gi|441427867|gb|ELR65335.1| putative DNA-binding protein [Photobacterium sp. AK15]
Length = 173
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
+++ ++H ++ E A+ +G +K+LF+K K ++ D+++D K++
Sbjct: 25 VDYQSWQHEPILDFETDARIAKELGWTAAPTKSLFMKIKGGGHCLLLTHRDSRLDSKLVK 84
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
Q LG + + E M+E + G+V PFAL E V +L+D + F P
Sbjct: 85 QLLG---KRVSVCSNEEMIEAIGCKPGAVCPFALPEE----VKVLVDPIVFSYPELMFTP 137
Query: 135 LSNDMSISLNTNDLDKFLKSI 155
D + + ++ L L+++
Sbjct: 138 GKPDFTFAFASSSLMTLLEAM 158
>gi|386760405|ref|YP_006233622.1| RNA-binding protein [Bacillus sp. JS]
gi|384933688|gb|AFI30366.1| RNA-binding protein [Bacillus sp. JS]
Length = 157
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 12 LKDLQIEFSQYEH--------PAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
L+ ++ F+Q+ + TVE A+ +G ++K L + + + ++ A
Sbjct: 3 LESVKTHFTQWNRENDVMEFETSSATVEQAAETIGVSPARIAKTLSFRGEGDQAILIVAA 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K+D K Q G RM + +LE +G V PF L A D+ + LD
Sbjct: 63 GDAKIDNKTFRQTFGFKA---RMLSPDEVLEQTGHEIGGVCPFGL----AYDLEVYLDVS 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
K E F S + +I L +L +F S A++D+
Sbjct: 116 LKRFETVFPACGSRNSAIELTPEELSEFSFS----KAWIDV 152
>gi|188586783|ref|YP_001918328.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351470|gb|ACB85740.1| YbaK/prolyl-tRNA synthetase associated region [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 157
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 14 DLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVL 73
DL ++ ++E + T + A +G G ++K++ K IV++ D KV L
Sbjct: 16 DLDLQVIEFEEGSTKTAQMAADKLGVAVGQIAKSILFKADDEPVLIVTS-GDVKVHTSSL 74
Query: 74 SQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFH 133
+ +G +MA E LEI G + PFAL + + +L+DK E+ +
Sbjct: 75 KKVIGAKP---KMAKPEECLEITGFYPGGLCPFAL----KQPIRILIDKSMGRFEKVYAA 127
Query: 134 PLSNDMSISLNTNDL 148
S D ++ + NDL
Sbjct: 128 AGSADTAVPITINDL 142
>gi|420143503|ref|ZP_14651000.1| Hypothetical protein Y7C_88808 [Lactococcus garvieae IPLA 31405]
gi|391856374|gb|EIT66914.1| Hypothetical protein Y7C_88808 [Lactococcus garvieae IPLA 31405]
Length = 163
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALADTKVDM 70
+ +L+I + EH A + E +Y+ G SK L L +KK +FY+V +V+M
Sbjct: 11 MAELEIPYKIVEHLASHSTEESDQYIEGHEGCRSKTLVLANKKSTQFYMVIMDDSKRVEM 70
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERC 130
L + LG+ + L EE + +L + G V+ + LV+ ++ + D+ +
Sbjct: 71 NKLGEILGVNR--LHFVSEERLESMLGLQPGIVSLYGLVDNKMDNMHVYFDREMLEEHDI 128
Query: 131 F-FHPLSNDMSISLNTNDLDKFL 152
HP N +I D K L
Sbjct: 129 MTLHPNDNTKTIFFPIEDCFKIL 151
>gi|421766498|ref|ZP_16203270.1| putative aminoacyl-tRNA editing enzyme [Lactococcus garvieae DCC43]
gi|407625008|gb|EKF51733.1| putative aminoacyl-tRNA editing enzyme [Lactococcus garvieae DCC43]
Length = 163
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSALA 64
+QL+ +L+I + EHPA + E +++ G SK L L +KK +FY+V
Sbjct: 8 EQLMV---ELEIPYKIVEHPASHSTEESDRHIEGYEGCRSKTLVLANKKSTQFYMVIMDD 64
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
+++M L + L + + L +E + +L + G V+ F LV + ++ + D
Sbjct: 65 SKRIEMDRLEELLEVNR--LHFVSKERLESLLGLQPGIVSIFGLVGKKMDNMHIYFDCEM 122
Query: 125 KAQERCF-FHPLSNDMSISLNTNDLDKFLKS 154
Q HP N +I D K L+S
Sbjct: 123 LEQHDIMTLHPNVNTKTIFFPMEDCFKILES 153
>gi|196044014|ref|ZP_03111251.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196025350|gb|EDX64020.1| conserved hypothetical protein [Bacillus cereus 03BB108]
Length = 155
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ ++A L + ++E+ V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVIALLHKTNASYEKFEYEPVLDYETDRIVRERLGLQGTPSKSLFLKSKSGDYYVFFTL 62
Query: 64 ADTKV---DMKVLS-QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALL 119
T++ +MK L+ +RL L +P+E + P G V PF + DV ++
Sbjct: 63 EGTRLNRGEMKELTGERLSL------CSPDELRDKTGCTP-GCVAPFGY----SHDVTII 111
Query: 120 LDKGFKAQERCFFHPLSNDMSISLNTNDLDKFL 152
+D ++ P + +I L+T +L K L
Sbjct: 112 VDSAIYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|255526767|ref|ZP_05393668.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296186444|ref|ZP_06854847.1| hypothetical protein CLCAR_1896 [Clostridium carboxidivorans P7]
gi|255509545|gb|EET85884.1| YbaK/prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048891|gb|EFG88322.1| hypothetical protein CLCAR_1896 [Clostridium carboxidivorans P7]
Length = 179
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDM 70
L++L I F + + +T+E + + + K LFL +++ FY+ D
Sbjct: 27 LQNLHIPFKRVDTDEAITMEDCVQINKKLDMKMVKTLFLCNRQQTVFYLFITTGDKPFKS 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQE 128
K S LG+ + + AP + M ++L +G+ T F+ + + DV ++ DK A+E
Sbjct: 87 KNFSNALGIAR--VSFAPADLMEKMLGAKIGAATVFSAILDKNNDVQIIFDKDVLAEE 142
>gi|421766048|ref|ZP_16202826.1| putative regulatory protein [Lactococcus garvieae DCC43]
gi|407625418|gb|EKF52122.1| putative regulatory protein [Lactococcus garvieae DCC43]
Length = 161
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSALADTKVD 69
L++ I F Y H A+ T E G G +K+LFLKDK + I + D
Sbjct: 8 LEENNIYFELYHHHAIYTNEDAVLMKEEYGFQGTETKSLFLKDKHGKHLIYFTFTTKRTD 67
Query: 70 MKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQER 129
K L + +G L + E M + G+V+PF E V +++DK QE+
Sbjct: 68 FKALKKLVG---KKLSVVVAEEMESLTGQKAGAVSPFGYEEE----VPVIIDKELLLQEK 120
Query: 130 CFFHPLSNDMSISLNTNDL 148
F P D ++ + ++ L
Sbjct: 121 LVFAPGRPDQTMVIKSSQL 139
>gi|373110407|ref|ZP_09524676.1| hypothetical protein HMPREF9712_02269 [Myroides odoratimimus CCUG
10230]
gi|423134225|ref|ZP_17121872.1| hypothetical protein HMPREF9715_01647 [Myroides odoratimimus CIP
101113]
gi|423326943|ref|ZP_17304751.1| hypothetical protein HMPREF9711_00325 [Myroides odoratimimus CCUG
3837]
gi|371643049|gb|EHO08607.1| hypothetical protein HMPREF9712_02269 [Myroides odoratimimus CCUG
10230]
gi|371646982|gb|EHO12492.1| hypothetical protein HMPREF9715_01647 [Myroides odoratimimus CIP
101113]
gi|404607513|gb|EKB07015.1| hypothetical protein HMPREF9711_00325 [Myroides odoratimimus CCUG
3837]
Length = 179
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
++Q L L +++ + E +T+E + + K LFL +++ FY+ L
Sbjct: 20 QEQTYDILSKLSMDWQRVETEEAITMEDCLLINERLDMNMVKTLFLCNRQRTVFYLFVTL 79
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D K S+ L + + + AP E + E ++ +G+ + F L+ ESA D+ L+ D+
Sbjct: 80 GDKPFSSKEFSEALSISR--VSFAPAEMLYEKMETKVGAASIFGLLRESASDIQLVFDQ 136
>gi|261207414|ref|ZP_05922100.1| predicted protein [Enterococcus faecium TC 6]
gi|289566664|ref|ZP_06447081.1| predicted protein [Enterococcus faecium D344SRF]
gi|260078305|gb|EEW66010.1| predicted protein [Enterococcus faecium TC 6]
gi|289161523|gb|EFD09406.1| predicted protein [Enterococcus faecium D344SRF]
Length = 157
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 17 IEFSQYEHPAVMTVE--AQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLS 74
I F Y H A+ T E K G +K+LFLKD Y+ + D K L
Sbjct: 13 IYFELYHHRAIYTNEDALVIKKEQGFTGTETKSLFLKDNN---YVYLTFTTKQTDFKALG 69
Query: 75 QRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHP 134
+ +G L + E M E G+V+PF + + +++D+ + E+ F P
Sbjct: 70 KIVG---KRLSIVSSERMEEQTGQKQGAVSPFGY----EKQIPIIIDEELLSNEKLVFAP 122
Query: 135 LSNDMSISLNTNDLDKFLK 153
D ++ + T DL+K ++
Sbjct: 123 GRPDQTMVIQTVDLNKIIQ 141
>gi|406997365|gb|EKE15454.1| hypothetical protein ACD_12C00012G0004 [uncultured bacterium]
Length = 617
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 4 SKDQLLARLKDL----QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLK-DKKHRFY 58
+K + +K+L ++ + EH V T E AK G+ +K L +K D+K
Sbjct: 463 NKKSVFEEIKNLLDKNKVSYKLIEHEPVFTSEEAAKIRGSSLALGAKALIMKADQKPIMI 522
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVAL 118
+VS + KVD + + + L MA +E + I V +G+V PF + + L
Sbjct: 523 VVSG--NKKVDTSIFKKLYKVK--DLEMATKEEVKIISGVEVGAVPPFG----NLFKIPL 574
Query: 119 LLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
D+ E FF+ S+ SIS+ +DL+K K I
Sbjct: 575 YFDQTIVDNETVFFNAGSHSKSISVKGSDLEKVTKPI 611
>gi|359406608|ref|ZP_09199285.1| hypothetical protein HMPREF0673_02520 [Prevotella stercorea DSM
18206]
gi|357555487|gb|EHJ37136.1| hypothetical protein HMPREF0673_02520 [Prevotella stercorea DSM
18206]
Length = 74
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 92 MLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKF 151
M+ L + GSV+PF L+N++ V L LD + + FHP ++ ++ + + +
Sbjct: 1 MMRFLGLEPGSVSPFGLINDTDNHVHLFLDANLQQADTLSFHPNDCRGTVVISRHAFENY 60
Query: 152 LKSIGRDPAYVDL 164
L +G Y+ L
Sbjct: 61 LSIVGNTYEYIKL 73
>gi|49481033|ref|YP_038991.1| DNA-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49332589|gb|AAT63235.1| probable DNA-binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 159
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIG--GGLSKNLFLKDKKHRFYIVSAL 63
+ +LA L + ++EH V+ E +G G SK+LFLK K +Y+ L
Sbjct: 3 EDVLALLHKTNASYEKFEHEPVLDYETDRIVRERLGLQGTPSKSLFLKSKAGDYYVFFTL 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
T+++ + + G L + + + + G V PF + DV +++D
Sbjct: 63 EGTRLNRGEMKELTG---ERLSLCSADELRDKTGCTPGCVAPFGY----SHDVTIIVDNT 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKFL 152
++ P + +I L+T +L K L
Sbjct: 116 IYTYDKILITPGVPEFTIELSTEELKKIL 144
>gi|225620621|ref|YP_002721878.1| YbaK/prolyl-tRNA synthetase associated region [Brachyspira
hyodysenteriae WA1]
gi|225215440|gb|ACN84174.1| YbaK/prolyl-tRNA synthetase associated region [Brachyspira
hyodysenteriae WA1]
Length = 153
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+++L LK+L IE+ ++E V TV+ AK + G ++K++ +K K F ++ A
Sbjct: 3 EKVLNALKELDIEYKEFEEAGVTKTVDDAAKTLNIERGQVAKSILVKPSKRNFAMIIASG 62
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D K+ K + A E ++ G V PF + +D+ +L+DK
Sbjct: 63 DKKISSKKMRVYFDCKTS---FANAEDTFKLTGFTFGGVCPFGI----DKDIDVLVDKSM 115
Query: 125 K 125
K
Sbjct: 116 K 116
>gi|433655677|ref|YP_007299385.1| LOW QUALITY PROTEIN: hypothetical protein Thethe_02097
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293866|gb|AGB19688.1| LOW QUALITY PROTEIN: hypothetical protein Thethe_02097
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 151
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A +G G ++K++ K K ++ +V + K+D + RM P
Sbjct: 27 TVEKAANTIGVSEGEIAKSMLFK-LKDKYIMVILSGEKKIDNRKFKDTFHCKA---RMVP 82
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDM--SISLNTN 146
E +LEI P+G V P+ L D+ + D K + +P + D+ ++++ +
Sbjct: 83 PEEVLEITGHPVGGVCPYGL----KTDIDIYYDISLKNYK--IVYPAAGDINAAVAIKVD 136
Query: 147 DLDKFLK 153
D+DK +K
Sbjct: 137 DMDKIVK 143
>gi|312112506|ref|YP_003990822.1| YbaK/prolyl-tRNA synthetase associated protein [Geobacillus sp.
Y4.1MC1]
gi|336236975|ref|YP_004589591.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Geobacillus thermoglucosidasius C56-YS93]
gi|423721457|ref|ZP_17695639.1| deacylase, ybaK family [Geobacillus thermoglucosidans TNO-09.020]
gi|311217607|gb|ADP76211.1| YbaK/prolyl-tRNA synthetase associated region [Geobacillus sp.
Y4.1MC1]
gi|335363830|gb|AEH49510.1| YbaK/prolyl-tRNA synthetase associated region [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365828|gb|EID43121.1| deacylase, ybaK family [Geobacillus thermoglucosidans TNO-09.020]
Length = 166
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A+ +G ++K L +DK R +V D K+D K G RM
Sbjct: 28 TVEQAAQTIGVEPARIAKTLCFRDKGDRALLVVTAGDAKIDNKKFRHTFGFKA---RMLS 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCF 131
E +LE +G V PF L N D+ + LD K + F
Sbjct: 85 AEEVLEQTGHVVGGVCPFGLAN----DLDVFLDLSLKRFKTVF 123
>gi|304317485|ref|YP_003852630.1| YbaK/prolyl-tRNA synthetase associated protein
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778987|gb|ADL69546.1| YbaK/prolyl-tRNA synthetase associated region
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 151
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A +G G ++K++ K K ++ +V + K+D + RM P
Sbjct: 27 TVEKAANAIGVSEGEIAKSMLFK-LKDKYIMVILSGEKKIDNRKFKNTFHCKA---RMVP 82
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDM--SISLNTN 146
E +LEI P+G V P+ L D+ + D K + +P + D+ ++++ +
Sbjct: 83 PEEVLEITGHPVGGVCPYGL----KTDIDIYYDISLKNYK--IVYPAAGDINAAVAIKVD 136
Query: 147 DLDKFLK 153
D+DK +K
Sbjct: 137 DMDKIVK 143
>gi|114567555|ref|YP_754709.1| YbaK/EbsC family protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338490|gb|ABI69338.1| YbaK/EbsC family protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 156
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
T A+ +G G ++K++ K ++ ++ A D ++D K L Q LG RMA
Sbjct: 29 TAPLAAQALGTEVGQIAKSILFKSNGDKYCMIVAAGDVRMDNKALKQLLG---SRPRMAN 85
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
E +L + +G V PFAL N + + LD+ K
Sbjct: 86 AEEVLAVTGFNVGGVCPFALPNP----IPIFLDESLK 118
>gi|384210311|ref|YP_005596031.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Brachyspira intermedia PWS/A]
gi|343387961|gb|AEM23451.1| YbaK/prolyl-tRNA synthetase associated region [Brachyspira
intermedia PWS/A]
Length = 153
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+++L LK+L IE+ ++E V TV+ AK + G ++K++ +K K F ++ A
Sbjct: 3 EKVLNALKELGIEYKEFEEAGVTKTVDDAAKTLNIERGQVAKSILVKPSKKNFAMIIASG 62
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D K+ K + A E ++ G V PF + +D+ +L+DK
Sbjct: 63 DKKISSKKMRTYFDCKTS---FANAEDTFKLTGFTFGGVCPFGI----DKDIDVLVDKSM 115
Query: 125 K 125
K
Sbjct: 116 K 116
>gi|213403478|ref|XP_002172511.1| cytoplasmic proline-tRNA ligase Prs1 [Schizosaccharomyces japonicus
yFS275]
gi|212000558|gb|EEB06218.1| cytoplasmic proline-tRNA ligase Prs1 [Schizosaccharomyces japonicus
yFS275]
Length = 711
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGG-------LSKNLFLKDKKHR 56
S D+L++ LK QI S+Y + VE ++ + L+K + LK K +
Sbjct: 2 SVDKLVSSLK--QIHLSEYPVVSHDRVENGKEWAAALQAANDVPAHSLTKTVVLKPKTPK 59
Query: 57 -----FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNE 111
+ +V +L T+ + ++ G + R+A + + +L V V+ F++ +
Sbjct: 60 SQEPVYLVVVSLDSTQSPSSIAAKSAGFKEA--RLAAADVVESVLGVKPSDVSVFSITSG 117
Query: 112 SARDVALLLDKGF-KAQERCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDL 164
+ V ++LD K+ + FHP + D ++ + + ++L+S+G P VD
Sbjct: 118 NNAQVKVVLDDALVKSDKPLAFHPNTADKTLIVPVAAVQQYLESVGVKPVVVDF 171
>gi|160934332|ref|ZP_02081719.1| hypothetical protein CLOLEP_03203 [Clostridium leptum DSM 753]
gi|156867005|gb|EDO60377.1| hypothetical protein CLOLEP_03203 [Clostridium leptum DSM 753]
Length = 180
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSAL 63
++++ L++LQI F + + V+T+E + + + K LFL +++ FY+
Sbjct: 21 QEKVYHTLENLQIPFERVDTDEVITMEDCSAVNEKLNMKMVKTLFLCNRQQTEFYLFITC 80
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K S L + + + AP E M +L +G+ T F+ + + V ++ DK
Sbjct: 81 GDKAFRSKDFSNALAVSR--VSFAPAELMETMLGTKIGAATVFSCLLDCDNKVQIVFDKD 138
Query: 124 FKAQE 128
++E
Sbjct: 139 VLSEE 143
>gi|403237310|ref|ZP_10915896.1| YbaK/prolyl-tRNA synthetase associated protein [Bacillus sp.
10403023]
Length = 170
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TV+ A+ +G ++K L + + +V A D K+D K GL RM P
Sbjct: 28 TVDQAAETIGVAPERIAKTLSFRGEGESAILVVAAGDAKIDNKKFRHTFGLKA---RMLP 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E ++E +G V PF L N ++ + LD+ K F S + +I L ++L
Sbjct: 85 AEEVVEQTGHVIGGVCPFGLAN----NLDVYLDESMKRFTTVFPACGSINSAIELTCDEL 140
Query: 149 DKFLKSIGRDPAYVDL 164
+F ++ G +VD+
Sbjct: 141 FQFSEAKG----WVDV 152
>gi|414871622|tpg|DAA50179.1| TPA: hypothetical protein ZEAMMB73_086352 [Zea mays]
Length = 902
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 51 KDKKHRFYIVSALADTKVDMK--VLSQRLGLGKGGLRMAPEETMLEILK-VPLGSVTPF- 106
KDKKH+ Y++SALA TK+DMK ++ R L + L ++ E+ + +LK V + +T F
Sbjct: 124 KDKKHQLYVISALAGTKIDMKSWTINMRHHL-RRQLIISMEKAWILVLKPVAVLIITNFQ 182
Query: 107 --ALVNESARDVALLLDKGFKAQERCFFHP 134
AL ++ RD+ + + K + F P
Sbjct: 183 AKALAEKNMRDILVQREHAEKHRLAEFLDP 212
>gi|445064631|ref|ZP_21376646.1| YbaK/prolyl-tRNA synthetase associated region [Brachyspira
hampsonii 30599]
gi|444503991|gb|ELV04738.1| YbaK/prolyl-tRNA synthetase associated region [Brachyspira
hampsonii 30599]
Length = 153
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVM-TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALA 64
+++L LK+L IE+ ++E + TV+ AK + G ++K++ +K K F ++ A
Sbjct: 3 EKVLNALKELNIEYKEFEEAGLTKTVDDAAKTLNIERGQVAKSILVKPSKKNFAMIIASG 62
Query: 65 DTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF 124
D K+ K + A E ++ G V PF + +D+ +L+DK
Sbjct: 63 DKKISSKKMRAYFDCKTS---FANAEDTFKLTGFTFGGVCPFGI----DKDIDVLVDKSM 115
Query: 125 K 125
K
Sbjct: 116 K 116
>gi|357051041|ref|ZP_09112237.1| hypothetical protein HMPREF9478_02220 [Enterococcus saccharolyticus
30_1]
gi|355380666|gb|EHG27802.1| hypothetical protein HMPREF9478_02220 [Enterococcus saccharolyticus
30_1]
Length = 70
Score = 40.8 bits (94), Expect = 0.82, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 96 LKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKSI 155
+ +P G V+ F L+N +D+ + ++ + R FHP +N +I L T D+ FL
Sbjct: 1 MHLPPGVVSIFGLLNNPEQDIQIFFEREITKEPRMSFHPNTNTKTIFLATKDVFNFLTVN 60
Query: 156 GRDPAYVDL 164
G +D+
Sbjct: 61 GFSYQIIDI 69
>gi|134298316|ref|YP_001111812.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Desulfotomaculum reducens MI-1]
gi|134051016|gb|ABO48987.1| YbaK/prolyl-tRNA synthetase associated region [Desulfotomaculum
reducens MI-1]
Length = 154
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQR 76
IEFS + TVE A+ +G G ++K++ + K+H V+A D +V++K +
Sbjct: 20 IEFSD----STSTVEEAARVLGVEPGQIAKSILFRAKEHFGLFVTA-GDVRVNLKKVKSL 74
Query: 77 LGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
LG +MA E + E+ +G V PFAL +D+ + LD+ +
Sbjct: 75 LGARP---KMASAEEVEEVTGYRVGGVCPFAL----KQDLPIYLDESMR 116
>gi|289578786|ref|YP_003477413.1| YbaK/prolyl-tRNA synthetase associated protein [Thermoanaerobacter
italicus Ab9]
gi|289528499|gb|ADD02851.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
italicus Ab9]
Length = 151
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K++ + K I++A D K+ + + K +MA
Sbjct: 27 TVEKAAKSLGVTPGEIAKSMLFRLKDKYIMIITA-GDKKIHNRKFKETF---KTKAKMAS 82
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSIS--LNTN 146
E +LE+ P+G V P+ L N V + D K E + P + D++ + +
Sbjct: 83 PEEVLEVTGHPVGGVCPYGLKNP----VEVYYDVSLKNYEVVY--PAAGDVNAAAIIKVE 136
Query: 147 DLDKFLK 153
DLDK ++
Sbjct: 137 DLDKIVE 143
>gi|16080800|ref|NP_391628.1| RNA-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|221311711|ref|ZP_03593558.1| hypothetical protein Bsubs1_20251 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316037|ref|ZP_03597842.1| hypothetical protein BsubsN3_20162 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320948|ref|ZP_03602242.1| hypothetical protein BsubsJ_20105 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325233|ref|ZP_03606527.1| hypothetical protein BsubsS_20271 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402777911|ref|YP_006631855.1| RNA-binding protein [Bacillus subtilis QB928]
gi|418031021|ref|ZP_12669506.1| hypothetical protein BSSC8_04500 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452912765|ref|ZP_21961393.1| ybaK / prolyl-tRNA synthetases associated domain protein [Bacillus
subtilis MB73/2]
gi|81637660|sp|P71000.1|YWHH_BACSU RecName: Full=Uncharacterized protein YwhH
gi|1565243|emb|CAB02518.1| Unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2636284|emb|CAB15775.1| putative RNA-binding protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|351472080|gb|EHA32193.1| hypothetical protein BSSC8_04500 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402483090|gb|AFQ59599.1| Putative RNA-binding protein [Bacillus subtilis QB928]
gi|407962590|dbj|BAM55830.1| RNA-binding protein [Bacillus subtilis BEST7613]
gi|407966603|dbj|BAM59842.1| RNA-binding protein [Bacillus subtilis BEST7003]
gi|452117793|gb|EME08187.1| ybaK / prolyl-tRNA synthetases associated domain protein [Bacillus
subtilis MB73/2]
Length = 157
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 12 LKDLQIEFSQYEH--------PAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSAL 63
LK ++ F+Q+ + TVE A+ +G ++K+L + + + ++ A
Sbjct: 3 LKSVRTHFTQWNRENDVTEFETSSATVEQAAETIGVSLSRIAKSLSFRGEGDQVILIVAA 62
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K+D K Q G RM +LE +G V PF L A D + LD
Sbjct: 63 GDAKIDNKKSRQTFGFKA---RMLSPNEVLEQTGHEIGGVCPFGL----AHDPEVYLDVS 115
Query: 124 FKAQERCFFHPLSNDMSISLNTNDLDKF 151
K + F S + +I L +L +F
Sbjct: 116 LKRFQTVFPACGSRNSAIELTPKELSEF 143
>gi|319652127|ref|ZP_08006246.1| hypothetical protein HMPREF1013_02859 [Bacillus sp. 2_A_57_CT2]
gi|317396116|gb|EFV76835.1| hypothetical protein HMPREF1013_02859 [Bacillus sp. 2_A_57_CT2]
Length = 171
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A+ +G ++K L + +V A D KVD K + GL RM
Sbjct: 28 TVEQAAETIGVSPAQIAKTLSFRGDGDEAILVVAAGDAKVDNKKFRKTFGLKA---RMLS 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE +G V PF L N ++ + LD+ K E F S++ +I L ++
Sbjct: 85 AEEVLEKTGHAVGGVCPFGLKN----NLDVYLDESMKRFETLFPACGSSNSAIELTPAEI 140
Query: 149 DKFLKSIGRDPAYVDL 164
+ + + A+VD+
Sbjct: 141 NTYSDA----KAWVDV 152
>gi|148379735|ref|YP_001254276.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|148289219|emb|CAL83314.1| putative prolyl-tRNA binding protein [Clostridium botulinum A str.
ATCC 3502]
Length = 152
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K L K IV A D ++D K GKG + MAP
Sbjct: 28 TVELAAKALGVEPGQIAKTLAFHVKGENMLIV-AKGDARIDNKKFKAYFN-GKGKM-MAP 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ +G V PF L N + + LD+ K E+ + + + ++ + ++L
Sbjct: 85 E-VVLEVTGHAIGGVCPFGLEN----PINIYLDQSLKEFEKVYPAAGNANTAVEVTLDEL 139
Query: 149 DKFLKSIGRD 158
+ K + D
Sbjct: 140 EGITKGLWID 149
>gi|187779631|ref|ZP_02996104.1| hypothetical protein CLOSPO_03227 [Clostridium sporogenes ATCC
15579]
gi|187773256|gb|EDU37058.1| YbaK/proline--tRNA ligase associated domain protein [Clostridium
sporogenes ATCC 15579]
Length = 152
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K L K IV A D ++D K GKG +M
Sbjct: 28 TVELAAKALGVEPGQIAKTLAFHVKGEDMLIV-AKGDARIDNKKFKAHFN-GKG--KMMT 83
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ +G V PF L N + + LD+ K E+ + + + +I + ++L
Sbjct: 84 PEVVLEVTGHAIGGVCPFGLENP----IDIYLDQSLKEFEKVYPAAGNANTAIEVTLDEL 139
Query: 149 DKFLKSIGRD 158
+ K + D
Sbjct: 140 EGITKGLWID 149
>gi|153933037|ref|YP_001384032.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Clostridium
botulinum A str. ATCC 19397]
gi|153935142|ref|YP_001387574.1| prolyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|152929081|gb|ABS34581.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium botulinum A
str. ATCC 19397]
gi|152931056|gb|ABS36555.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium botulinum A
str. Hall]
Length = 163
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K L K IV A D ++D K GKG + MAP
Sbjct: 39 TVELAAKALGVEPGQIAKTLAFHVKGENMLIV-AKGDARIDNKKFKAYFN-GKGKM-MAP 95
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ +G V PF L N + + LD+ K E+ + + + ++ + ++L
Sbjct: 96 E-VVLEVTGHAIGGVCPFGLEN----PINIYLDQSLKEFEKVYPAAGNANTAVEVTLDEL 150
Query: 149 DKFLKSIGRD 158
+ K + D
Sbjct: 151 EGITKGLWID 160
>gi|153938494|ref|YP_001391030.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Clostridium
botulinum F str. Langeland]
gi|384462069|ref|YP_005674664.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Clostridium
botulinum F str. 230613]
gi|152934390|gb|ABS39888.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium botulinum F
str. Langeland]
gi|295319086|gb|ADF99463.1| YbaK/prolyl-tRNA synthetase domain protein [Clostridium botulinum F
str. 230613]
Length = 163
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K L K IV A D ++D K GKG + MAP
Sbjct: 39 TVELAAKALGVEPGQIAKTLAFHVKGENMLIV-AKGDARIDNKKFKAYFN-GKGKM-MAP 95
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ +G V PF L N + + LD+ K E+ + + + ++ + ++L
Sbjct: 96 E-VVLEVTGHAIGGVCPFGLEN----PINIYLDQSLKEFEKVYPAAGNANTAVEVTLDEL 150
Query: 149 DKFLKSIGRD 158
+ K + D
Sbjct: 151 EGITKGLWID 160
>gi|389844988|ref|YP_006347068.1| hypothetical protein Theba_2192 [Mesotoga prima MesG1.Ag.4.2]
gi|387859734|gb|AFK07825.1| hypothetical protein Theba_2192 [Mesotoga prima MesG1.Ag.4.2]
Length = 156
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 6 DQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALAD 65
++++A LK +EF ++ T A+ + G ++K++ K R Y+V D
Sbjct: 4 EKVMAILKANDLEFYEFPEGTTPTAITAAQMLKVKVGQIAKSILFICKSGRAYLVVCPGD 63
Query: 66 TKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFK 125
KV + L + G R+A E T L++ GSV PF L +D+ +++D +
Sbjct: 64 RKVSLSKLKKIAGEKP---RLADETTTLQLTGFSPGSVCPFGL-----QDINIIVDLNLR 115
Query: 126 AQERCF 131
+ F
Sbjct: 116 EYDVVF 121
>gi|86742085|ref|YP_482485.1| hypothetical protein Francci3_3402 [Frankia sp. CcI3]
gi|86568947|gb|ABD12756.1| YbaK/prolyl-tRNA synthetase-like protein [Frankia sp. CcI3]
Length = 162
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 11 RLKDL----QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLK---DKKHRFYIVSAL 63
RL DL + + HP + ++ G+ +K+L ++ ++ R Y+++ +
Sbjct: 10 RLTDLFESGSVSYRMIPHPPEGHTDVASRLRGHPLQQAAKSLVVRVATGRRSRRYVLAVV 69
Query: 64 -ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +VD+ L+ R G + A E + GS+TPF E + L++D+
Sbjct: 70 PGDRRVDLNALADRYGGREASF--AAREVAERLAGSVSGSITPFVFSPE----LDLIVDE 123
Query: 123 GFKAQERCFFHPLSNDMSISLNTND 147
G + +F+ D+S++L+ +D
Sbjct: 124 GLLIHDEIYFNAGRLDLSVALSVSD 148
>gi|167039857|ref|YP_001662842.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Thermoanaerobacter sp. X514]
gi|307724818|ref|YP_003904569.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
sp. X513]
gi|166854097|gb|ABY92506.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
sp. X514]
gi|307581879|gb|ADN55278.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
sp. X513]
Length = 151
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K++ + K I++A D K+D K +MA
Sbjct: 27 TVEKAAKSLGVTPGEIAKSMLFRLKDKYIMIITA-GDRKIDNKKFKDTFKTKA---KMAS 82
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ P+G V P+ L N V + D K E + + + ++ DL
Sbjct: 83 PEEVLEVTGHPVGGVCPYGLKNP----VEVYYDVSLKNYEVVYPAAGDTNAAATIKVEDL 138
Query: 149 DKFLK 153
DK ++
Sbjct: 139 DKIVE 143
>gi|410453491|ref|ZP_11307446.1| YbaK/prolyl-tRNA synthetase associated protein [Bacillus
bataviensis LMG 21833]
gi|409933157|gb|EKN70091.1| YbaK/prolyl-tRNA synthetase associated protein [Bacillus
bataviensis LMG 21833]
Length = 176
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TV+ A+ +G + ++K L + + ++ A D KVD K Q+ G RM
Sbjct: 34 TVDEAAETIGVMPARIAKTLSFRGSEDNAILIVAAGDAKVDNKKFRQKFGFKP---RMLS 90
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ +LE +G V PF L N D+ + LD + E F S + +I L+ +L
Sbjct: 91 PDEVLEQTGHAIGGVCPFGLKN----DLEVFLDVSIQRFETLFPACGSTNSAIELSKVEL 146
Query: 149 DKFLKSIGRDPAYVDL 164
++ ++ +VD+
Sbjct: 147 FQYSSAV----EWVDV 158
>gi|415886084|ref|ZP_11547907.1| putative RNA-binding protein [Bacillus methanolicus MGA3]
gi|387588737|gb|EIJ81058.1| putative RNA-binding protein [Bacillus methanolicus MGA3]
Length = 172
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A +G I ++K L + + + ++ A D K+D K G RM
Sbjct: 28 TVEQAADTIGVIPARIAKTLSFRGEGEKAILIVAAGDAKIDNKKFRHTFGFKA---RMLT 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ +LE +G V PF L NE + + LD K E F S + +I L ++L
Sbjct: 85 PDEVLEQTGHVIGGVCPFGLKNE----MDVYLDVSMKRFETLFPACGSPNSAIELTCDEL 140
Query: 149 DKF 151
++
Sbjct: 141 FQY 143
>gi|441496599|ref|ZP_20978826.1| Adenylate cyclase [Fulvivirga imtechensis AK7]
gi|441439463|gb|ELR72778.1| Adenylate cyclase [Fulvivirga imtechensis AK7]
Length = 366
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 9 LARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRF 57
L RL EF+ YE V+ A A ++G + GG FLKDK RF
Sbjct: 20 LVRLSQQAFEFNDYELETVLVTNAFAVFIGGLVGGSLMIFFLKDKLRRF 68
>gi|423119824|ref|ZP_17107508.1| hypothetical protein HMPREF9690_01830 [Klebsiella oxytoca 10-5246]
gi|376397520|gb|EHT10152.1| hypothetical protein HMPREF9690_01830 [Klebsiella oxytoca 10-5246]
Length = 166
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 4 SKDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDK-----KHRFY 58
+ QLLA L+ Q + EH AV EA ++ G G +K L K K +H
Sbjct: 9 THRQLLALLEQHQAHYRVVEHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLA 68
Query: 59 IVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVA- 117
I++ AD + D+ L+Q +G K L E L G++ PF+ + R +A
Sbjct: 69 ILA--ADQQADLSRLAQHIGGSKASLASPAEVDTLT--ACVFGAIPPFSF-HPDLRLIAD 123
Query: 118 -LLLDKGFKAQERCFFHPLSNDMSISLNTND 147
LL D+ F+ D SI LNT D
Sbjct: 124 PLLFDR----YPEIAFNAGQLDKSIILNTED 150
>gi|424834345|ref|ZP_18259056.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Clostridium
sporogenes PA 3679]
gi|365978691|gb|EHN14760.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Clostridium
sporogenes PA 3679]
Length = 154
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K L K IV A D ++D K GKG +M
Sbjct: 28 TVELAAKALGVEQGQIAKTLAFHVKGENMLIV-AKGDARIDNKKFKAHFN-GKG--KMMT 83
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ +G V PF L N + + LD+ K E+ + + + ++ + ++L
Sbjct: 84 PEAVLEVTGHVIGGVCPFGLEN----PIDIYLDQSLKEFEKVYPAAGNANTAVEVTLDEL 139
Query: 149 DKFLKSIGRD 158
+ K + D
Sbjct: 140 EGITKGLWID 149
>gi|225018601|ref|ZP_03707793.1| hypothetical protein CLOSTMETH_02550 [Clostridium methylpentosum
DSM 5476]
gi|224948628|gb|EEG29837.1| hypothetical protein CLOSTMETH_02550 [Clostridium methylpentosum
DSM 5476]
Length = 195
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKH-RFYIVSAL 63
++++ L+DL+I F + + V+T+E + + + K LFL +++ FY+
Sbjct: 36 QEKVYRTLEDLRIPFERVDTDEVITMEDCTRINEKLNMKMVKTLFLCNRQQTEFYLFITC 95
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKG 123
D K S L + + + AP E M +L +G+ T F+ + + V ++ D
Sbjct: 96 GDKPFRSKDFSNALAVSR--VSFAPAELMETMLGTKVGAATVFSSLLDCDNKVQIVFDND 153
Query: 124 FKAQERCFFHPLSNDMS---ISLNTNDL-DKFLKSIGRDPAYVDL 164
+E ++ S+ + + + T D+ KFL P +++
Sbjct: 154 VLTEE---YYGCSDGTTTGYMKIRTEDIVRKFLNYAKHKPTVIEV 195
>gi|297545007|ref|YP_003677309.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842782|gb|ADH61298.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 166
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 13 KDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKV 72
K IE +E + TVE AK +G G ++K++ + K I++A D K+D K
Sbjct: 28 KGYDIEIKIFEDTS--TVEKAAKSLGVTPGEIAKSMLFRLKDKYIMIITA-GDRKIDNKK 84
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
+MA E +LE+ P+G V P+ L N V + D K E +
Sbjct: 85 FKDTFKTKA---KMASPEEVLEVTGHPVGGVCPYGLKNP----VEVYYDVSLKNYEVVY- 136
Query: 133 HPLSNDMSIS--LNTNDLDKFLKS 154
P + D++ + + DLDK ++
Sbjct: 137 -PAAGDINAAAIIKVEDLDKIVEG 159
>gi|225575754|ref|ZP_03784364.1| hypothetical protein RUMHYD_03847 [Blautia hydrogenotrophica DSM
10507]
gi|225037007|gb|EEG47253.1| YbaK/proline--tRNA ligase associated domain protein [Blautia
hydrogenotrophica DSM 10507]
Length = 155
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A VG ++K L K + +V+A D K+D GL +M
Sbjct: 28 TVELAALAVGVEPARIAKTLSFKKGEETILVVTA-GDRKIDNAKYKHYFGLKA---KMLT 83
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ +LE + +G V PFA+ ++V + LD+ K E + S + +I L +L
Sbjct: 84 PDEVLERVGHAIGGVCPFAV----PKEVQVYLDESMKRFETVYPACGSGNSAIGLTCEEL 139
Query: 149 DKFLKSIGRDPAYVDL 164
+K+ S A+VD+
Sbjct: 140 EKYSNS----KAWVDV 151
>gi|421192778|ref|ZP_15650031.1| polyphosphate kinase [Oenococcus oeni AWRIB553]
gi|399974356|gb|EJO08519.1| polyphosphate kinase [Oenococcus oeni AWRIB553]
Length = 1032
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|419859256|ref|ZP_14381911.1| polyphosphate kinase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496805|gb|EKP88284.1| polyphosphate kinase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 1032
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|387927839|ref|ZP_10130518.1| RNA-binding protein [Bacillus methanolicus PB1]
gi|387589983|gb|EIJ82303.1| RNA-binding protein [Bacillus methanolicus PB1]
Length = 170
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE A +G I ++K L + + + ++ A D K+D K + G RM
Sbjct: 28 TVEEAADTIGVIPARIAKTLSFRGEGDKAILIVAAGDAKIDNKKFRRTFGFKA---RMLS 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ +LE +G V PF L NE + + LD K + F S + +I L ++L
Sbjct: 85 PDDVLEQTGHVIGGVCPFGLKNE----MDVYLDISMKRFDTLFPACGSTNSAIELTCDEL 140
Query: 149 DKF 151
++
Sbjct: 141 FQY 143
>gi|290891208|ref|ZP_06554270.1| hypothetical protein AWRIB429_1660 [Oenococcus oeni AWRIB429]
gi|419758376|ref|ZP_14284693.1| polyphosphate kinase [Oenococcus oeni AWRIB304]
gi|419856584|ref|ZP_14379305.1| polyphosphate kinase [Oenococcus oeni AWRIB202]
gi|421184769|ref|ZP_15642185.1| polyphosphate kinase [Oenococcus oeni AWRIB318]
gi|421195091|ref|ZP_15652303.1| polyphosphate kinase [Oenococcus oeni AWRIB568]
gi|421196960|ref|ZP_15654141.1| polyphosphate kinase [Oenococcus oeni AWRIB576]
gi|290479172|gb|EFD87834.1| hypothetical protein AWRIB429_1660 [Oenococcus oeni AWRIB429]
gi|399904998|gb|EJN92449.1| polyphosphate kinase [Oenococcus oeni AWRIB304]
gi|399966371|gb|EJO00920.1| polyphosphate kinase [Oenococcus oeni AWRIB318]
gi|399976279|gb|EJO10305.1| polyphosphate kinase [Oenococcus oeni AWRIB576]
gi|399976875|gb|EJO10888.1| polyphosphate kinase [Oenococcus oeni AWRIB568]
gi|410499629|gb|EKP91060.1| polyphosphate kinase [Oenococcus oeni AWRIB202]
Length = 1032
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|421188207|ref|ZP_15645546.1| polyphosphate kinase [Oenococcus oeni AWRIB419]
gi|421189125|ref|ZP_15646444.1| polyphosphate kinase [Oenococcus oeni AWRIB422]
gi|421191915|ref|ZP_15649185.1| polyphosphate kinase [Oenococcus oeni AWRIB548]
gi|399965764|gb|EJO00330.1| polyphosphate kinase [Oenococcus oeni AWRIB419]
gi|399970736|gb|EJO05027.1| polyphosphate kinase [Oenococcus oeni AWRIB548]
gi|399973882|gb|EJO08046.1| polyphosphate kinase [Oenococcus oeni AWRIB422]
Length = 1032
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|355674796|ref|ZP_09059790.1| hypothetical protein HMPREF9469_02827 [Clostridium citroniae
WAL-17108]
gi|354813897|gb|EHE98502.1| hypothetical protein HMPREF9469_02827 [Clostridium citroniae
WAL-17108]
Length = 179
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 5 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSAL 63
++++ L+ LQI F + + +T+E + + K LFL +++ FY+ +
Sbjct: 20 QEKVYEALEKLQIPFQRVDTDEAITMEDCVAIDEKLDMNMVKTLFLCNRQQTDFYLFITI 79
Query: 64 ADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
+ K S LG+ + + AP E M IL G+ T F+ + ++ V ++ DK
Sbjct: 80 GNKPFRSKDFSNALGVAR--VSFAPAEQMESILGTKTGAATVFSSLLDTENKVRIVFDK 136
>gi|116491601|ref|YP_811145.1| polyphosphate kinase [Oenococcus oeni PSU-1]
gi|116092326|gb|ABJ57480.1| Polyphosphate kinase [Oenococcus oeni PSU-1]
Length = 704
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|442805193|ref|YP_007373342.1| hypothetical protein Cst_c17520 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741043|gb|AGC68732.1| hypothetical protein Cst_c17520 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 157
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK + ++K L LK ++ A D K+D + + G+ RM
Sbjct: 28 TVELAAKALNCEPARIAKTLALKAADEGVILIVAAGDAKIDNQKFKAKFGIKP---RMLS 84
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
+ L ++ P+G + PFA VNE R LD + E F S + +I L +L
Sbjct: 85 PDEALAMVGHPVGGICPFA-VNEGVRT---YLDISLRRFETVFPACGSGNSAIELTIEEL 140
Query: 149 D 149
+
Sbjct: 141 E 141
>gi|118586383|ref|ZP_01543832.1| polyphosphate kinase [Oenococcus oeni ATCC BAA-1163]
gi|118433170|gb|EAV39887.1| polyphosphate kinase [Oenococcus oeni ATCC BAA-1163]
Length = 701
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 198 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 256
Query: 155 I 155
+
Sbjct: 257 V 257
>gi|345861859|ref|ZP_08814108.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Desulfosporosinus sp. OT]
gi|344325054|gb|EGW36583.1| ybaK / prolyl-tRNA synthetases associated domain protein
[Desulfosporosinus sp. OT]
Length = 152
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 16 QIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQ 75
+IE ++E + TV A+ +G G ++K+L K K + I+ A D ++D K +
Sbjct: 16 EIEILEFEDTS--TVPKAAEALGVTPGEIAKSLLFKVKDNFIMILMA-GDKRLDNKKFKE 72
Query: 76 RLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPL 135
+ G +M E + E P+G V PF L + + + LD + ER F
Sbjct: 73 ---IFHGKAKMPEAEEVSEATGHPVGGVCPFGL----KQPIPIYLDYSLQEYERVFPAAG 125
Query: 136 SNDMSISLNTNDLDKFLKSIGRD 158
+ + +I L +L++ K D
Sbjct: 126 APNSAIKLKVKELEELTKGQWVD 148
>gi|421185585|ref|ZP_15642984.1| polyphosphate kinase [Oenococcus oeni AWRIB418]
gi|399968848|gb|EJO03279.1| polyphosphate kinase [Oenococcus oeni AWRIB418]
Length = 697
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 95 ILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDLDKFLKS 154
++K+P+G + L+ + R+ LL +G+K QE FH L DM +S+ D LK
Sbjct: 194 VIKLPIGVGQTYVLIEDVIREYINLLFQGYKIQEVTAFH-LLRDMELSIAEEDSPNLLKE 252
Query: 155 I 155
+
Sbjct: 253 V 253
>gi|225571107|ref|ZP_03780124.1| hypothetical protein CLOHYLEM_07213 [Clostridium hylemonae DSM
15053]
gi|225160188|gb|EEG72807.1| hypothetical protein CLOHYLEM_07213 [Clostridium hylemonae DSM
15053]
Length = 179
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 12 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTK-VDM 70
L +L++ + + + +T+E + + K LFL +KK + + D K D
Sbjct: 27 LGELKVPYKRVDTDEAITMEDCVLINRRLDMDMVKTLFLCNKKKTLFYLFITTDNKPFDT 86
Query: 71 KVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
K ++L + + + AP+E EIL+ +G+ T ++++++ + + ++ DK
Sbjct: 87 KKFCEQLNIPR--VSFAPKELFEEILETKIGAATVYSVLHDWDKTIQVIFDK 136
>gi|354557988|ref|ZP_08977245.1| YbaK/prolyl-tRNA synthetase associated region [Desulfitobacterium
metallireducens DSM 15288]
gi|353549662|gb|EHC19103.1| YbaK/prolyl-tRNA synthetase associated region [Desulfitobacterium
metallireducens DSM 15288]
Length = 151
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 13 KDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKV 72
KD +I+ +E + TV A+ +G G ++K+L L+ K F +V D ++D +
Sbjct: 13 KDKEIQILTFEDTS--TVAKAAESIGVTPGEIAKSLLLQ-VKDDFIMVLMAGDKRLDNRK 69
Query: 73 LSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFF 132
K +M E +LEI P+G V PF L + + LD+ +A + +
Sbjct: 70 FKDMF---KAKPKMPEVEQVLEITGHPVGGVCPFGL----KEKIPVYLDQSLRAYAKVYP 122
Query: 133 HPLSNDMSISLNTNDLDKFLKSIGRDPA 160
+ + ++ L +L+ + + D A
Sbjct: 123 AAGAPNAAVGLKVEELEALVATDWVDVA 150
>gi|357037875|ref|ZP_09099674.1| YbaK/prolyl-tRNA synthetase associated region [Desulfotomaculum
gibsoniae DSM 7213]
gi|355360431|gb|EHG08189.1| YbaK/prolyl-tRNA synthetase associated region [Desulfotomaculum
gibsoniae DSM 7213]
Length = 395
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 9 LARLKDLQIEFSQYEHPAVM-----TVEAQAKYVGNIGGGLSKNLFLK-DKKHRFYIVSA 62
+AR++ EF P V TVE A+ +G G ++K L + ++ ++V+
Sbjct: 248 VARVRRYVKEFDAGLAPLVFSEATSTVEEAARALGVEPGMIAKTLLFRAGDQYGLFVVAG 307
Query: 63 LADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
D +V K + LG G RMA E + EI +G V PFAL A DV + LD
Sbjct: 308 --DVRVSTKKVKALLG---GKPRMATPEEVEEITGYRVGGVCPFAL----ATDVPIYLDA 358
Query: 123 GFK 125
+
Sbjct: 359 SMQ 361
>gi|167759536|ref|ZP_02431663.1| hypothetical protein CLOSCI_01886 [Clostridium scindens ATCC 35704]
gi|167662846|gb|EDS06976.1| hypothetical protein CLOSCI_01886 [Clostridium scindens ATCC 35704]
Length = 177
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 7 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADT 66
Q+LA LK I + + + +T+E + + + K LFL +KK + + D
Sbjct: 33 QVLAELK---IPYKRVDTDEAITMEDCVQINAKLDMDMVKTLFLCNKKKTLFYLFITTDK 89
Query: 67 K-VDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK 122
K D K + L + + + AP+E EIL +G+ T ++++++ + + ++ D+
Sbjct: 90 KPFDTKKFCEALEIPR--VSFAPQELFEEILGTKIGAATIYSVLDDWDKTIQVIFDQ 144
>gi|388583509|gb|EIM23811.1| hypothetical protein WALSEDRAFT_59427 [Wallemia sebi CBS 633.66]
Length = 543
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 17 IEFSQYEHPAVMTVEAQAKYVGNIGGG-LSKNLFLKDKKHRFYIVSALADTKVDMKVLSQ 75
I + Y P +MT +G G G S NL K+ F + L DT+ D L
Sbjct: 320 ITNTMYGSPGLMTPSTSTTSIGGAGNGDTSLNLHRLSKQELFRL---LVDTQSDFHALKS 376
Query: 76 RLGLGKGGLRMAPEETMLEI 95
R GL KG L +T+ E+
Sbjct: 377 RYGLEKGALEDQLRDTLEEV 396
>gi|300915319|ref|ZP_07132633.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
sp. X561]
gi|345018088|ref|YP_004820441.1| YbaK/prolyl-tRNA synthetase associated domain-containing protein
[Thermoanaerobacter wiegelii Rt8.B1]
gi|392940220|ref|ZP_10305864.1| hypothetical protein ThesiDRAFT1_1476 [Thermoanaerobacter
siderophilus SR4]
gi|300888595|gb|EFK83743.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
sp. X561]
gi|344033431|gb|AEM79157.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
wiegelii Rt8.B1]
gi|392291970|gb|EIW00414.1| hypothetical protein ThesiDRAFT1_1476 [Thermoanaerobacter
siderophilus SR4]
Length = 166
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K++ + K I++A D K+D K +MA
Sbjct: 42 TVEKAAKSLGVTPGEIAKSMLFRLKDKYIMIITA-GDRKIDNKKFKDTFKTKA---KMAS 97
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ P+G V P+ L N V + D K E + + + ++ DL
Sbjct: 98 PEEVLEVTGHPVGGVCPYGLKNP----VEVYYDVSLKNYEVVYPAAGDTNAAATIKVEDL 153
Query: 149 DKFLK 153
DK ++
Sbjct: 154 DKIVE 158
>gi|448725185|ref|ZP_21707662.1| hypothetical protein C448_01279 [Halococcus morrhuae DSM 1307]
gi|445800146|gb|EMA50508.1| hypothetical protein C448_01279 [Halococcus morrhuae DSM 1307]
Length = 462
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 147 DLDKF-LKSIGRDPAYVDLEANPAVGKDQPPDLAAFVPSGSTVLPDLPD 194
D++KF L++I P+Y D++ NP+V D P L F G+ VL + P+
Sbjct: 4 DVEKFVLRAIDDQPSYQDVKENPSVAPDMPGRLVVFGTMGTIVLLENPE 52
>gi|357488911|ref|XP_003614743.1| hypothetical protein MTR_5g058520 [Medicago truncatula]
gi|355516078|gb|AES97701.1| hypothetical protein MTR_5g058520 [Medicago truncatula]
Length = 106
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 170 VGKDQPPDLAAFVPSGSTVLPDLPD--PASAVQSAGGSHVNANNNCKAATEKAIKPAKDV 227
+ KDQPPD+AA VPS S V+ +L + P+S V +H + +N + ++K K AK V
Sbjct: 19 LSKDQPPDIAALVPSSSMVMLNLSEMQPSSQV-PVDENHDSVDNKSSSLSKKVTK-AKPV 76
Query: 228 QNVKDKS 234
N +S
Sbjct: 77 SNAHSQS 83
>gi|326391634|ref|ZP_08213162.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
ethanolicus JW 200]
gi|325992335|gb|EGD50799.1| YbaK/prolyl-tRNA synthetase associated region [Thermoanaerobacter
ethanolicus JW 200]
Length = 166
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 29 TVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAP 88
TVE AK +G G ++K++ + K I++A D K+D K +MA
Sbjct: 42 TVEKAAKSLGVTPGEIAKSMLFRLKDKYIMIITA-GDRKIDNKKFKDTFKTKA---KMAS 97
Query: 89 EETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLNTNDL 148
E +LE+ P+G V P+ L N + + D K E + + + ++ DL
Sbjct: 98 PEEVLEVTGHPVGGVCPYGLKNP----IEVYYDVSLKNYEVVYPAAGDTNAAATIKVEDL 153
Query: 149 DKFLK 153
DK ++
Sbjct: 154 DKIVE 158
>gi|390189886|emb|CCD32120.1| Conserved hypothetical protein [Methylocystis sp. SC2]
Length = 988
Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 216 ATEKAIKPAKDVQNVKDKSAKAVNPSSSFTDAEKFVEEILDRISAKLLSETKEGNIAQQG 275
A+++A A+ Q+ +D+SA+A P+S+ T+ E +++I R+ + ET++ N AQ G
Sbjct: 838 ASQEAAPTAR--QDKRDESARAEGPASTATEREMRLQDIRGRVDREAARETEQANHAQAG 895
Query: 276 QE 277
+E
Sbjct: 896 KE 897
>gi|338730060|ref|YP_004659452.1| prolyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
gi|335364411|gb|AEH50356.1| prolyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
Length = 574
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 25 PAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGL 84
P V TV+ A ++G + K+L + V AL ++ V ++ + L
Sbjct: 258 PNVRTVQQVADFLGVKPSRIVKSLLFVGRNG---FVMALIQGDKELNVEKLKVQMQDQSL 314
Query: 85 RMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGFKAQERCFFHPLSNDMSISLN 144
R+A E +LE KVP+G + P L N V ++ D G K + + D +N
Sbjct: 315 RLAEPEEVLEAFKVPIGFIGPVGLNN-----VTIVADYGVKYMKNVVVGGMKTDYH-YVN 368
Query: 145 TNDLDKFLKSIGRD 158
TN +GRD
Sbjct: 369 TN--------LGRD 374
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,871,602,227
Number of Sequences: 23463169
Number of extensions: 200189853
Number of successful extensions: 466376
Number of sequences better than 100.0: 940
Number of HSP's better than 100.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 330
Number of HSP's that attempted gapping in prelim test: 464791
Number of HSP's gapped (non-prelim): 972
length of query: 324
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 182
effective length of database: 9,027,425,369
effective search space: 1642991417158
effective search space used: 1642991417158
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)