Query 020595
Match_columns 324
No_of_seqs 174 out of 1283
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:21:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020595.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020595hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j1z_P YIIP, cation efflux fam 100.0 2.6E-57 8.8E-62 415.8 14.7 280 29-315 8-292 (306)
2 3h90_A Ferrous-iron efflux pum 100.0 4.5E-56 1.5E-60 403.9 18.5 275 33-314 3-282 (283)
3 3byp_A CZRB protein; membrane 99.6 9.1E-16 3.1E-20 115.5 10.7 86 228-314 1-88 (94)
4 2zzt_A Putative uncharacterize 99.6 1.2E-14 4.1E-19 111.9 9.4 84 230-314 1-87 (107)
5 3h90_A Ferrous-iron efflux pum 97.6 3.8E-05 1.3E-09 68.7 4.2 92 34-133 112-203 (283)
6 3j1z_P YIIP, cation efflux fam 97.5 5.8E-05 2E-09 68.4 4.6 92 34-133 121-212 (306)
7 1ib8_A Conserved protein SP14. 73.5 17 0.00058 29.0 8.4 70 254-323 26-98 (164)
8 3cq1_A Putative uncharacterize 72.8 16 0.00053 26.6 7.4 73 238-313 7-85 (103)
9 2jsx_A Protein NAPD; TAT, proo 69.9 14 0.00049 26.6 6.5 62 235-310 15-77 (95)
10 3lno_A Putative uncharacterize 64.9 9.1 0.00031 28.2 4.7 45 266-313 44-89 (108)
11 1uwd_A Hypothetical protein TM 64.1 9.2 0.00031 27.8 4.5 45 266-313 42-86 (103)
12 3zzp_A TS9, ribosomal protein 62.1 12 0.00042 25.8 4.6 69 226-298 6-74 (77)
13 2dbb_A Putative HTH-type trans 57.6 54 0.0018 25.0 8.4 65 233-309 76-141 (151)
14 3gxs_A Phenylacetate-coenzyme 47.5 75 0.0026 22.8 9.6 69 240-311 17-88 (109)
15 1rwu_A Hypothetical UPF0250 pr 46.8 61 0.0021 23.9 6.5 61 235-305 46-108 (109)
16 2cg4_A Regulatory protein ASNC 46.2 48 0.0016 25.4 6.3 61 237-310 80-141 (152)
17 2zbc_A 83AA long hypothetical 44.2 48 0.0016 22.2 5.4 61 237-310 13-74 (83)
18 2jp3_A FXYD domain-containing 44.0 27 0.00092 23.3 3.6 32 91-123 7-38 (67)
19 1otg_A 5-carboxymethyl-2-hydro 43.7 99 0.0034 23.1 9.5 74 236-311 18-108 (125)
20 2cvi_A 75AA long hypothetical 43.3 59 0.002 22.0 5.8 61 238-311 14-75 (83)
21 3e6q_A Putative 5-carboxymethy 42.5 1.2E+02 0.004 23.5 8.1 73 236-310 40-128 (146)
22 3tuf_A Stage III sporulation p 39.3 52 0.0018 27.0 5.5 63 239-312 134-196 (197)
23 3lax_A Phenylacetate-coenzyme 38.7 1E+02 0.0035 21.8 9.9 62 240-302 17-80 (109)
24 3abf_A 4-oxalocrotonate tautom 38.1 47 0.0016 21.0 4.3 42 272-313 4-47 (64)
25 2kjw_A TS9, 30S ribosomal prot 36.8 1E+02 0.0035 22.0 6.2 69 227-299 7-75 (96)
26 2pn6_A ST1022, 150AA long hypo 35.8 78 0.0027 24.0 6.0 62 236-310 75-137 (150)
27 1mli_A Muconolactone isomerase 35.4 1.2E+02 0.0042 21.7 7.6 22 269-290 4-25 (96)
28 2zxe_G FXYD10, phospholemman-l 33.6 36 0.0012 23.1 3.0 31 92-123 10-40 (74)
29 2cyy_A Putative HTH-type trans 33.4 89 0.003 23.8 6.0 63 235-311 76-139 (151)
30 2f1f_A Acetolactate synthase i 32.5 1.6E+02 0.0055 23.2 7.4 63 235-306 13-75 (164)
31 2yy3_A Elongation factor 1-bet 32.3 1.3E+02 0.0046 21.2 7.5 66 236-308 18-86 (91)
32 1vq3_A Phosphoribosylformylgly 30.3 1.5E+02 0.0051 21.1 8.2 61 239-309 33-93 (94)
33 2r4f_A 3-hydroxy-3-methylgluta 28.4 3.5E+02 0.012 25.1 9.8 75 236-313 178-253 (441)
34 2x4k_A 4-oxalocrotonate tautom 27.5 1E+02 0.0034 19.1 4.6 41 272-312 6-48 (63)
35 2jo1_A Phospholemman; FXYD1, N 27.4 53 0.0018 22.1 3.0 32 92-124 7-38 (72)
36 2e1c_A Putative HTH-type trans 27.2 1.2E+02 0.0039 24.0 5.8 63 235-311 96-159 (171)
37 1zpv_A ACT domain protein; str 26.4 1.5E+02 0.0052 20.0 10.2 75 235-319 15-89 (91)
38 2i52_A Hypothetical protein; s 26.3 67 0.0023 24.1 3.7 31 282-313 40-70 (121)
39 1i1g_A Transcriptional regulat 26.0 1.2E+02 0.0041 22.5 5.5 63 235-310 73-136 (141)
40 2djw_A Probable transcriptiona 25.8 45 0.0015 23.2 2.7 63 235-310 11-74 (92)
41 2p5v_A Transcriptional regulat 25.6 1.4E+02 0.0048 22.9 5.9 60 237-309 83-143 (162)
42 3mb2_A 4-oxalocrotonate tautom 25.6 67 0.0023 21.2 3.4 40 273-312 5-46 (72)
43 2vv5_A MSCS, small-conductance 25.2 3.2E+02 0.011 23.3 10.1 74 238-312 201-280 (286)
44 3eb7_A Insecticidal delta-endo 24.6 2.7E+02 0.0094 26.7 8.9 67 181-247 5-76 (589)
45 2jvf_A De novo protein M7; tet 24.3 99 0.0034 20.8 3.9 49 258-312 9-57 (96)
46 1gh8_A Translation elongation 24.3 98 0.0034 21.9 4.2 65 237-308 17-83 (89)
47 3qov_A Phenylacetate-coenzyme 23.9 2.6E+02 0.0088 25.1 8.3 59 239-299 343-404 (436)
48 2pc6_A Probable acetolactate s 23.4 1.6E+02 0.0056 23.2 5.9 64 235-307 14-77 (165)
49 3efg_A Protein SLYX homolog; x 23.4 57 0.0019 22.5 2.7 11 314-324 68-78 (78)
50 3m20_A 4-oxalocrotonate tautom 23.3 87 0.003 19.9 3.6 40 272-312 3-44 (62)
51 4dx5_A Acriflavine resistance 22.2 1.2E+02 0.0041 31.5 6.1 71 236-307 105-177 (1057)
52 3ej9_A Alpha-subunit of trans- 22.2 71 0.0024 21.4 3.0 40 272-311 4-45 (76)
53 2ogf_A Hypothetical protein MJ 21.2 84 0.0029 23.5 3.4 29 282-310 45-73 (122)
54 3i4p_A Transcriptional regulat 20.9 2.9E+02 0.0098 21.2 9.0 61 236-310 76-137 (162)
55 1ghh_A DINI, DNA-damage-induci 20.7 2.2E+02 0.0074 19.7 5.6 39 270-308 3-43 (81)
56 2ko1_A CTR148A, GTP pyrophosph 20.7 1.9E+02 0.0066 19.1 9.5 63 235-307 15-77 (88)
57 2ia0_A Putative HTH-type trans 20.7 2.7E+02 0.0092 21.7 6.8 58 238-310 96-154 (171)
58 2y27_A Phenylacetate-coenzyme 20.5 4.6E+02 0.016 23.4 9.3 59 240-299 346-406 (437)
No 1
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=100.00 E-value=2.6e-57 Score=415.76 Aligned_cols=280 Identities=19% Similarity=0.237 Sum_probs=257.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHH
Q 020595 29 ARSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILV 108 (324)
Q Consensus 29 ~~~~~~~~~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~ 108 (324)
..+-|++.++++++|++++++|+++|+++||.||+|||+||++|+++.++++++.++++||||++|||||+|+|++++++
T Consensus 8 ~~~vr~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~ 87 (306)
T 3j1z_P 8 DFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALA 87 (306)
T ss_dssp TCCSSTTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHH
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hcCHHHHHhHHHhhhhHHH
Q 020595 109 FASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVIT 184 (324)
Q Consensus 109 ~~~~l~~~~~~i~~~si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~----~~s~~l~a~~~~~~~D~~~ 184 (324)
+++++++++++++++|++++++|++. ....++++++++++++|..++++.++ .+|.++++++.|+++|+++
T Consensus 88 ~~~~l~~~~~~i~~eai~~l~~p~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~ 162 (306)
T 3j1z_P 88 QSAFIMGSAFLLLFYGGERLLNPSPV-----ENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFL 162 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTCCG-----GGTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhhheecCCCc-----cccccchhhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhh
Confidence 99999999999999999999999873 33445677788888889988888754 5799999999999999999
Q ss_pred HHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhcCCCcccceeEEEEE
Q 020595 185 NIIGLVAVLLANYID-DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYT 263 (324)
Q Consensus 185 s~~~~i~~~~~~~~~-~~~D~i~si~i~~~i~~~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~ 263 (324)
|+ +++.++++.+++ +|+||++++++++++++.+++++|++.+.|+|++|+++..++|++.+++ .|+|.++|++|+|+
T Consensus 163 s~-~vli~~~~~~~g~~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~i~~-~~~V~~vh~l~~~~ 240 (306)
T 3j1z_P 163 NA-AVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKE-DPRVLGLHDLRTRQ 240 (306)
T ss_dssp CT-TCCCTTSSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-STTBCCCCCBCCEE
T ss_pred hh-HHHHHHHHHHhCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhc-CCCcceeeeEEEEE
Confidence 94 555566666667 7999999999999999999999999999999999999999999999987 89999999999999
Q ss_pred eCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecccCC
Q 020595 264 FGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTH 315 (324)
Q Consensus 264 ~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~~ 315 (324)
.|++.++++|+++|+++|++|+|++.+++|++|++.+++.+++||+||+..+
T Consensus 241 ~G~~~~v~~hi~v~~~~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~e 292 (306)
T 3j1z_P 241 AGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVE 292 (306)
T ss_dssp ETTEEEEEECCEECTTSBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTSC
T ss_pred ECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCCC
Confidence 9999999999999999999999999999999998766788999999997644
No 2
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=100.00 E-value=4.5e-56 Score=403.85 Aligned_cols=275 Identities=18% Similarity=0.230 Sum_probs=252.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHHHHHH
Q 020595 33 TLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASV 112 (324)
Q Consensus 33 ~~~~~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~~~~~ 112 (324)
+|++++++++|++++++|+++|+++||.||++||+||++|++++++++++.+.++||||++|||||+|+|++++++++++
T Consensus 3 ~r~~~~~~~~n~~l~~~k~~~g~~t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~ 82 (283)
T 3h90_A 3 SRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMF 82 (283)
T ss_dssp CTHHHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH----HhcCHHHHHhHHHhhhhHHHHHHH
Q 020595 113 MATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR----AFTNEIVKAYAQDHFFDVITNIIG 188 (324)
Q Consensus 113 l~~~~~~i~~~si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~----~~~s~~l~a~~~~~~~D~~~s~~~ 188 (324)
+++++++++++|++++++|++. ....++++++++++++|.+++++.+ +.+|+++++++.|+++|+++|+ +
T Consensus 83 l~~~~~~i~~eai~~l~~~~~~-----~~~~~~l~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~-~ 156 (283)
T 3h90_A 83 ISGSALFLFLTGIQHLISPTPM-----TDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNG-A 156 (283)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCC-----CCCCCCTHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCS-C
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-H
Confidence 9999999999999999998773 2234567788889999999988875 4589999999999999999984 5
Q ss_pred HHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe
Q 020595 189 LVAVLLANYID-DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH 267 (324)
Q Consensus 189 ~i~~~~~~~~~-~~~D~i~si~i~~~i~~~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~ 267 (324)
++.+++..++| +|+||++++++++++++.+++++|++.+.|+|++|+++..+++++.+++ .|+|.++|++|+|+.|++
T Consensus 157 vli~~~~~~~g~~~~D~i~~i~ia~~i~~~~~~l~~~s~~~Ll~~~~~~~~~~~i~~~i~~-~~~V~~v~~l~~~~~G~~ 235 (283)
T 3h90_A 157 ILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPT 235 (283)
T ss_dssp SCSSSCSCSTTSCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-SSSCSEEEEEEEEEETTE
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhc-CCCcccceeeEEEEECCc
Confidence 55555556677 6999999999999999999999999999999999999999999999988 899999999999999999
Q ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecccC
Q 020595 268 YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT 314 (324)
Q Consensus 268 ~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~ 314 (324)
.++++|+++|+++|++|+|++++++|+.|++.++..+++||+||+.+
T Consensus 236 ~~v~~hv~v~~~~~~~~~~~i~~~i~~~l~~~~~~~~v~ih~ep~~~ 282 (283)
T 3h90_A 236 RFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSV 282 (283)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHHHHHHHHHHSTTCEEEEEEECSCC
T ss_pred EEEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 99999999999999999999999999999853344799999999754
No 3
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=99.65 E-value=9.1e-16 Score=115.47 Aligned_cols=86 Identities=19% Similarity=0.313 Sum_probs=73.5
Q ss_pred HhhcCCCCHHHHHHHHHHHHhcC--CCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceE
Q 020595 228 SLVGRSAAPEYLQKLTYLCWNHH--KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERA 305 (324)
Q Consensus 228 ~Ll~~~~~~~~~~~i~~~l~~~~--~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v 305 (324)
.|+|.+|+++..++|++.+.+ . +||.+||++|+|+.|+.+++++|+.+++++|+.++|++.+++++.|++.+++.++
T Consensus 1 ~Lld~~~~~~~~~~I~~~l~~-~~~~gV~~vh~l~~~~~g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~~~v 79 (94)
T 3byp_A 1 GLMDEGLPPEEVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQA 79 (94)
T ss_dssp -----CCCHHHHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred CCcCCCCCHHHHHHHHHHHHh-cCCCCceeeeeEEEEEECCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 489999999999999999987 8 9999999999999999999999999999999999999999999999753344499
Q ss_pred EEEeecccC
Q 020595 306 FVHLDYEYT 314 (324)
Q Consensus 306 ~i~i~p~~~ 314 (324)
+||+||+.+
T Consensus 80 tIh~ep~~~ 88 (94)
T 3byp_A 80 TIHVEPEGE 88 (94)
T ss_dssp EEEEEECC-
T ss_pred EEEeCCCCc
Confidence 999999543
No 4
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=99.56 E-value=1.2e-14 Score=111.93 Aligned_cols=84 Identities=18% Similarity=0.326 Sum_probs=74.5
Q ss_pred hcCCCCHH--HHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH-cCCCcceEE
Q 020595 230 VGRSAAPE--YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEIERAF 306 (324)
Q Consensus 230 l~~~~~~~--~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~-~~~~v~~v~ 306 (324)
||.+|+++ ..++|++.+.+ .|||.+||++|+|+.|+.+++++||.+++++|+.+++++.+++++.|+ +++++.+++
T Consensus 1 md~~~~~~~~~~~~I~~~l~~-~~gV~~vh~lr~r~~G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vt 79 (107)
T 2zzt_A 1 MDGMKRTELDMYDDIFAVLER-FPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVT 79 (107)
T ss_dssp ---CCHHHHHHHHHHHHHHTT-CSSCEEEEEEEEECSCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred CCCCCCccHHHHHHHHHHHHc-CCCccccEEEEEEEECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence 57788899 99999999987 899999999999999999999999999999999999999999999997 466699999
Q ss_pred EEeecccC
Q 020595 307 VHLDYEYT 314 (324)
Q Consensus 307 i~i~p~~~ 314 (324)
||+||...
T Consensus 80 IhvEp~~~ 87 (107)
T 2zzt_A 80 IHVEPLGN 87 (107)
T ss_dssp EEEEETTC
T ss_pred EEEecCCC
Confidence 99999754
No 5
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=97.60 E-value=3.8e-05 Score=68.73 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHHHHHHH
Q 020595 34 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 113 (324)
Q Consensus 34 ~~~~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~~~~~l 113 (324)
....+++++|.+++....-.+-..+|.++.+|++|...|+++++.++++...+ -+|+..+++++++++++++
T Consensus 112 ~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~--------~~g~~~~D~i~~i~ia~~i 183 (283)
T 3h90_A 112 IVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLS--------WYGWHRADALFALGIGIYI 183 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSCSC--------STTSCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCchHHHHHHHHHHHHHH
Confidence 45678888999988888888888999999999999999999998877765332 2588899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCc
Q 020595 114 ATLGLQIILESLRTLVSNED 133 (324)
Q Consensus 114 ~~~~~~i~~~si~~l~~~~~ 133 (324)
+..++.++++++..|++..+
T Consensus 184 ~~~~~~l~~~s~~~Ll~~~~ 203 (283)
T 3h90_A 184 LYSALRMGYEAVQSLLDRAL 203 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999998766
No 6
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=97.54 E-value=5.8e-05 Score=68.36 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHHHHHHH
Q 020595 34 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 113 (324)
Q Consensus 34 ~~~~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~~~~~l 113 (324)
.+..++++.|..+.......+-..+|.++.||++|..+|+++++.++++.-.+. ||+..+++++++++++++
T Consensus 121 ~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~--------~g~~~~Dpi~ai~Ia~~I 192 (306)
T 3j1z_P 121 VVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQ--------YGWWWADGLFAVLIACYI 192 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCC--------SSSCCCHHHHHHHHHHHH
T ss_pred hhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhhhHHHHHHHHHH--------hCcchhhhHHHHHHHHHH
Confidence 355667778888888887788888999999999999999999988887664432 588899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCc
Q 020595 114 ATLGLQIILESLRTLVSNED 133 (324)
Q Consensus 114 ~~~~~~i~~~si~~l~~~~~ 133 (324)
+..++.++++++..|++..+
T Consensus 193 ~~~~~~l~~~s~~~Ll~~~~ 212 (306)
T 3j1z_P 193 GQQAFDLGYRSIQALLDREL 212 (306)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhCccc
Confidence 99999999999999998766
No 7
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=73.47 E-value=17 Score=29.02 Aligned_cols=70 Identities=16% Similarity=0.250 Sum_probs=51.7
Q ss_pred ccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH--cCCCc-ceEEEEeecccCCCCccccCC
Q 020595 254 RHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE--LLPEI-ERAFVHLDYEYTHRPEHAQAH 323 (324)
Q Consensus 254 ~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~--~~~~v-~~v~i~i~p~~~~~~~~~~~~ 323 (324)
..+.++...+-|+...+.+.|.-+..+++++..++.+.+...|. ....+ ..-+.++-.-..++|=.++.|
T Consensus 26 ~eLvdve~~~~g~~~~LrV~ID~~~gi~lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGldRpL~~~~d 98 (164)
T 1ib8_A 26 FELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDA 98 (164)
T ss_dssp SEEEEEEEEEETTEEEEEEEEECSSCCCHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSSSCCSSHHH
T ss_pred cEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCCCCCCCHHH
Confidence 56778888888988888888888888999999999999999997 43233 234666655455665554444
No 8
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=72.84 E-value=16 Score=26.57 Aligned_cols=73 Identities=18% Similarity=0.301 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhc-CCCc-ccc---eeEEEEEe-CCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 238 YLQKLTYLCWNH-HKSI-RHI---DTVRAYTF-GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 238 ~~~~i~~~l~~~-~~~v-~~v---~~l~~~~~-G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
..++|.+.+++. .|+. .++ .-++-... |+.+.+++.+..+ ..+. .+.+.+++++.|++.+++.+|.|++..
T Consensus 7 ~~~~V~~aL~~V~DPel~~~iv~lG~V~~v~v~~~~V~v~l~lt~~-~cp~--~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 7 LEAQAWALLEAVYDPELGLDVVNLGLIYDLVVEPPRAYVRMTLTTP-GCPL--HDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp HHHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEETTEEEEEECCSSS-SCCS--SCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred HHHHHHHHHhCCCCCCCCcCchhcCceEEEEEECCEEEEEEEECCC-CCcH--HHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 445677777652 2432 122 22222222 4444444444332 3343 477999999999988999998888764
Q ss_pred cc
Q 020595 312 EY 313 (324)
Q Consensus 312 ~~ 313 (324)
++
T Consensus 84 ~p 85 (103)
T 3cq1_A 84 EP 85 (103)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 9
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=69.94 E-value=14 Score=26.57 Aligned_cols=62 Identities=5% Similarity=0.022 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEe-CCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTF-GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~-G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
.|+..+++.+.+.+ .||+ ++ +...- ..++.| .++-+ +. +++.+.+ +.|++.|||..+.....
T Consensus 15 ~p~~~~~V~~~L~~-ipgv-Ei---~~~~~~~GkiVV--~iEa~---~~---~~l~~~i-~~I~~i~GVlst~lvy~ 77 (95)
T 2jsx_A 15 KSERISDISTQLNA-FPGC-EV---AVSDAPSGQLIV--VVEAE---DS---ETLIQTI-ESVRNVEGVLAVSLVYH 77 (95)
T ss_dssp CTTSHHHHHHHHTT-STTE-EE---EEEETTTTEEEE--EEEES---SH---HHHHHHH-HHHTTSTTEEEEEESSC
T ss_pred CCCCHHHHHHHHHC-CCCe-EE---EEecCCCCCEEE--EEEeC---CH---HHHHHHH-HHHhcCCCccEEeEEEE
Confidence 45778899999987 8886 33 33222 123333 33333 22 5566666 78999999988776544
No 10
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=64.90 E-value=9.1 Score=28.21 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=32.7
Q ss_pred CeEEEEEEEEcCCCCCHHHHHHHHHHHHHHH-HcCCCcceEEEEeeccc
Q 020595 266 SHYFVEVDIVLPASMPLQEAHDIGESLQEKL-ELLPEIERAFVHLDYEY 313 (324)
Q Consensus 266 ~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l-~~~~~v~~v~i~i~p~~ 313 (324)
+.+.+++.+..+. .+. ...+.+++++.| ++.+++.+|.|++..++
T Consensus 44 ~~V~V~ltlt~p~-cp~--~~~i~~~i~~al~~~l~Gv~~V~V~l~~~p 89 (108)
T 3lno_A 44 NNAVITMTMTSIG-CPM--AGQIVSDVKKVLSTNVPEVNEIEVNVVWNP 89 (108)
T ss_dssp CCEEEEECCSCTT-CTT--HHHHHHHHHHHHHHHCTTCCCEEEEECCSS
T ss_pred CeEEEEEEECCCC-CcH--HHHHHHHHHHHHHHhCCCCceEEEEEEecC
Confidence 4466666555443 343 478999999999 78999999998887554
No 11
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=64.06 E-value=9.2 Score=27.83 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=31.9
Q ss_pred CeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeeccc
Q 020595 266 SHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEY 313 (324)
Q Consensus 266 ~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~ 313 (324)
+.+.+.+.+..+ ..+. .+.+++++++.|++.+++.+|.|++..++
T Consensus 42 ~~V~v~l~lt~~-~cp~--~~~l~~~i~~al~~l~gv~~v~V~l~~~p 86 (103)
T 1uwd_A 42 NNVKVLMTMTTP-MCPL--AGMILSDAEEAIKKIEGVNNVEVELTFDP 86 (103)
T ss_dssp CEEEEEECCSSS-CCSS--HHHHHHHHHHHHHTSSSCCEEEEEECCSS
T ss_pred CEEEEEEEECCC-CCcH--HHHHHHHHHHHHHhCCCcceEEEEEecCC
Confidence 345555555433 3343 57899999999999899999888876544
No 12
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=62.11 E-value=12 Score=25.81 Aligned_cols=69 Identities=17% Similarity=0.128 Sum_probs=48.5
Q ss_pred HHHhhcCCCCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHc
Q 020595 226 VNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL 298 (324)
Q Consensus 226 ~~~Ll~~~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~ 298 (324)
...|+.-..+++..+++.+.+.- .+.|. ...+.+......-++-..++|+++-++..+..+++++.|.+
T Consensus 6 ~Yvl~~~~a~~~~i~Eler~~ri-ne~Vl---R~l~vr~d~~r~YE~m~Il~P~l~ee~~~~~vek~~~~i~~ 74 (77)
T 3zzp_A 6 YTTWYQVEMPEDRVNDLARELRI-RDNVR---RVMVVASTTPGRYEVNIVLNPNLDQSQLQNEKEIIQRALEN 74 (77)
T ss_dssp TEEEEEEECCHHHHHHHHHHHHT-STTEE---EEEEEECSSTTEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCHhHHHHHHHHhCC-CHHHH---HHHHHhccCCCceEEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 34456666788999999998864 45553 33344444333335566789999999999999999999865
No 13
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=57.56 E-value=54 Score=25.05 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEe
Q 020595 233 SAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHL 309 (324)
Q Consensus 233 ~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i 309 (324)
..++...+++.+.+.+ .|+|..++.+ .|+. +.+.++.. + +.+ ++.+-+.+.|.+.|+|.++...+
T Consensus 76 ~~~~~~~~~~~~~l~~-~peV~~~~~v----tG~~d~~~~v~~~-~---d~~---~l~~~~~~~l~~~~gV~~~~t~i 141 (151)
T 2dbb_A 76 SKVPSDADKVISEISD-IEYVKSVEKG----VGRYNIIVRLLLP-K---DIK---DAENLISEFLQRIKNAENVEVIL 141 (151)
T ss_dssp ESSHHHHHHHHHHHTT-CTTEEEEEEE----ESSCSEEEEEEEE-S---SHH---HHHHHHHHHHHTCCSEEEEEEEE
T ss_pred EeCCCCHHHHHHHHHc-CCCeEEEeEe----cCCCCEEEEEEEc-C---CHH---HHHHHHHHHhhcCCCeeEEEEEE
Confidence 3466677888888877 8888766543 5654 55544431 2 223 34444557788889998766554
No 14
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=47.48 E-value=75 Score=22.75 Aligned_cols=69 Identities=12% Similarity=0.042 Sum_probs=40.0
Q ss_pred HHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCC---HHHHHHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 240 QKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP---LQEAHDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 240 ~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t---~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
.+|++.+.+ +|+|.....+-+..-+..-.+.+.+++ ++.. ..+..++.+.+++.+++..++. ..|++-+
T Consensus 17 ~eIE~~l~~-~p~v~~~~~v~v~~~~~~e~l~~~ve~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~-~~v~~v~ 88 (109)
T 3gxs_A 17 IQIETILLQ-FKELGSDYLITLETAESNDEMTVEVEL-SQLFTDDYGRLQALTREITRQLKDEILVT-PRVKLVP 88 (109)
T ss_dssp HHHHHHHHT-CTTEEEEEEEEEEEETTEEEEEEEEEE-CTTCCCCHHHHHHHHHHHHHHHHHHHSSC-CEEEEEC
T ss_pred HHHHHHHHh-CCCcCCcEEEEEEcCCCceEEEEEEEE-cCccccchhHHHHHHHHHHHHHHHhhCCc-eEEEEEC
Confidence 456666776 788865555555444444445556666 4322 3456778888888886433443 2444433
No 15
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=46.79 E-value=61 Score=23.89 Aligned_cols=61 Identities=16% Similarity=0.139 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEe--CCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTF--GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERA 305 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~--G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v 305 (324)
.++..+.|.+.++++.||-..+ ..+.. |...-+++.+.+.. .+ -.+.+-+.|++.++|..|
T Consensus 46 ~~~~~~~V~~vv~~~~p~d~~~---~~r~Ss~GkY~Svtv~v~v~S---~e----Qv~aiY~~L~~~~~VkmV 108 (109)
T 1rwu_A 46 LPELVDQVVEVVQRHAPGDYTP---TVKPSSKGNYHSVSITINATH---IE----QVETLYEELGKIDIVRMV 108 (109)
T ss_dssp CTTHHHHHHHHHHHHSSSCCCE---EEEESSCSSEEEEEEEECCSS---HH----HHHHHHHHHSCSSSCEEE
T ss_pred cHHHHHHHHHHHHHhCCCCCCc---eecCCCCCeEEEEEEEEEECC---HH----HHHHHHHHHhcCCCEEEe
Confidence 5567888999998866732222 44444 44455666665543 23 455667778777877543
No 16
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=46.24 E-value=48 Score=25.43 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 237 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 237 ~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
...+++.+.+.+ .|+|..++.+ .|+. +.+.++. + +. +++.+-+.+.|.+.|+|.++..++-
T Consensus 80 ~~~~~~~~~l~~-~peV~~~~~v----tG~~d~~~~v~~--~---d~---~~l~~~l~~~l~~~~gV~~~~t~iv 141 (152)
T 2cg4_A 80 KDYPSALAKLES-LDEVTEAYYT----TGHYSIFIKVMC--R---SI---DALQHVLINKIQTIDEIQSTETLIV 141 (152)
T ss_dssp GGHHHHHHHHHT-CTTEEEEEEE----SSSCSEEEEEEE--S---CH---HHHHHHHHHTTTTSTTEEEEEEEEC
T ss_pred CCHHHHHHHHhC-CcCeEEEEEE----ecccCEEEEEEE--C---CH---HHHHHHHHHHhhcCCCeeEEEEEEE
Confidence 357788888887 8888766543 4654 5555544 3 23 3444455567778899987766553
No 17
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=44.22 E-value=48 Score=22.24 Aligned_cols=61 Identities=8% Similarity=0.176 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 237 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 237 ~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
...+++.+.+.+ .|+|.+++.+ .|+. +.+ ++.++ +.+ ++.+-+.+.|.+.|||.++..++-
T Consensus 13 ~~~~~~~~~l~~-~peV~~~~~v----tG~~d~l~--~v~~~---d~~---~l~~~~~~~l~~~~gV~~~~t~iv 74 (83)
T 2zbc_A 13 GGEDEVFERLKS-MSEVTEVHVV----YGVYDIVV--KVEAD---SMD---KLKDFVTNTIRKLPKVRSTLTMII 74 (83)
T ss_dssp TCHHHHHHHHTT-CTTEEEEEEC----SSSCSEEE--EEECS---SHH---HHHHHHHHTGGGSTTEEEEEEEEC
T ss_pred CCHHHHHHHHhC-CCCeEEEEEE----eccCCEEE--EEEEC---CHH---HHHHHHHHHhcCCCCEeEEEEEEE
Confidence 335778888876 7887655322 2543 444 44444 233 344445567888899988776664
No 18
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=43.99 E-value=27 Score=23.30 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=22.8
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 020595 91 PYQYPIGKKRMQPLGILVFASVMATLGLQIILE 123 (324)
Q Consensus 91 ~~~~p~G~~r~E~l~~l~~~~~l~~~~~~i~~~ 123 (324)
+..|-|-|+.+.. ++|+.+.+++.+|+.++..
T Consensus 7 ~dpF~YDY~tLRi-gGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 7 GSPFYYDWESLQL-GGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp TSGGGGGGHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred CCCcccchHHhee-cchhhHHHHHHHHHHHHHc
Confidence 3455566667655 7888888888888877764
No 19
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=43.68 E-value=99 Score=23.05 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEE-------EeCC----eEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCC----
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAY-------TFGS----HYFVEVDIVLPASMPLQEAHDIGESLQEKLELLP---- 300 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~-------~~G~----~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~---- 300 (324)
+...+.+.+.+.+ .+.....++|+| ..|. .-++.++|.+-+.-|.++-.++.+.+-+.+++..
T Consensus 18 ~~L~~~lh~~l~~--~~~fp~~~ik~Ra~~~~~~~vg~~~~~~~fvhi~i~i~~GRs~eqK~~L~~~v~~~l~~~l~~~~ 95 (125)
T 1otg_A 18 PGLFAKVNPTLAA--TGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALM 95 (125)
T ss_dssp HHHHHHHHHHHHT--TSSSCGGGCEEEEEEESSEEETTSCSCEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHH--cCCCCCcCceEeeEEcccEEEcCCCCCcceEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhhhhc
Confidence 4667777777765 344455555543 2231 1467777777677799999999999999997532
Q ss_pred --CcceEEEEeec
Q 020595 301 --EIERAFVHLDY 311 (324)
Q Consensus 301 --~v~~v~i~i~p 311 (324)
....+.|.++.
T Consensus 96 ~~~~~~vsv~i~E 108 (125)
T 1otg_A 96 ESRLLALSFEIEE 108 (125)
T ss_dssp TTSEEEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 24567776654
No 20
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=43.34 E-value=59 Score=22.01 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 238 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 238 ~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
..+++.+.+++ .|+|.+++.+ .|+. +.+.+. ++ +.+ ++.+-+.+.|.+.|+|.++...+--
T Consensus 14 ~~~~~~~~l~~-~peV~e~~~v----tG~~D~ll~v~--~~---d~~---~l~~~i~~~l~~~~gV~~~~T~ivl 75 (83)
T 2cvi_A 14 KEREVMEKLLA-MPEVKEAYVV----YGEYDLIVKVE--TD---TLK---DLDQFITEKIRKMPEIQMTSTMIAI 75 (83)
T ss_dssp CHHHHHHHHHT-STTEEEEEEC----BSSCSEEEEEE--ES---SHH---HHHHHHHTTGGGCTTEEEEEEEEEE
T ss_pred CHHHHHHHHhC-CCCeeEEEEE----cccCCEEEEEE--EC---CHH---HHHHHHHHHhccCCCEeEEEEEEEE
Confidence 35778888877 8887755322 3554 555444 33 233 3444455678888999887766543
No 21
>3e6q_A Putative 5-carboxymethyl-2-hydroxymuconate isomer; structural genomics, APC7683, isomerase, PSI-2, protein STRU initiative; HET: GOL IMD; 1.75A {Pseudomonas aeruginosa}
Probab=42.48 E-value=1.2e+02 Score=23.54 Aligned_cols=73 Identities=14% Similarity=0.125 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEE-------EeCC----eEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHc-CCC--
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAY-------TFGS----HYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPE-- 301 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~-------~~G~----~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~-~~~-- 301 (324)
+...+.|.+.+.+ .+.....++|+| ..|. .-++.+.+.+-+.-|.++-.++.+.+-+.|++ .+.
T Consensus 40 ~~l~~~vh~al~~--~g~fp~~diK~Ra~~~~~y~vg~~~~~~~FVhV~i~ll~GRt~EqK~~L~e~v~~al~~~l~~~~ 117 (146)
T 3e6q_A 40 GELLEQANAALFA--SGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGG 117 (146)
T ss_dssp HHHHHHHHHHHHH--TTSSCGGGCEEEEEEESSEEESSSSCCCCEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHEEECS
T ss_pred HHHHHHHHHHHHh--cCCCCccCeeEEEEEccceEEcCCCCCccEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4688888888776 345555566653 3332 24666666666777999999999999999964 222
Q ss_pred --cceEEEEee
Q 020595 302 --IERAFVHLD 310 (324)
Q Consensus 302 --v~~v~i~i~ 310 (324)
...++|++.
T Consensus 118 ~~~~~lsVeI~ 128 (146)
T 3e6q_A 118 EEGVQVSVEVR 128 (146)
T ss_dssp SSCEEEEEEEE
T ss_pred CCceEEEEEEE
Confidence 235666664
No 22
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=39.25 E-value=52 Score=27.04 Aligned_cols=63 Identities=11% Similarity=0.118 Sum_probs=41.0
Q ss_pred HHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecc
Q 020595 239 LQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYE 312 (324)
Q Consensus 239 ~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~ 312 (324)
...|+..|.. .++.|+-+.-.+..+.|.+. .+.++-.++.+|.+-+.+.+.-- .+|.|+++|.
T Consensus 134 E~~IE~LLKA-----KGF~DAVV~i~dd~V~VVVk---a~~Ls~~eaaqI~DIV~r~tgv~---~dV~Vqf~p~ 196 (197)
T 3tuf_A 134 EKQLETLIKT-----QGYEDALVNAEGDKINITVK---SDKHSKSKATAIIDLVAKEIKTM---KDVAVTFEPS 196 (197)
T ss_dssp HHHHHHHHHH-----TTCSCEEEECSSSEEEEEEE---CSCCCHHHHHHHHHTSCHHHHTT---SEEEEEEECC
T ss_pred HHHHHHHHHh-----CCCCceEEEecCCEEEEEEe---CCCCCHHHHHHHHHHHHHhhCCC---CceEEEeeeC
Confidence 3445555554 34567777766765554443 46789888888888777776421 3589999883
No 23
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=38.73 E-value=1e+02 Score=21.83 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=39.0
Q ss_pred HHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHHcCCCc
Q 020595 240 QKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS--MPLQEAHDIGESLQEKLELLPEI 302 (324)
Q Consensus 240 ~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~--~t~~~~~~i~~~i~~~l~~~~~v 302 (324)
.+|++.+.+ +|+|.+..-+-+..-+..-.+.+.++..+. .+..+..++.+++++.+++..++
T Consensus 17 ~eIE~vl~~-~p~v~~~~vv~v~~~~~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~l~~~~gv 80 (109)
T 3lax_A 17 IQIETILLQ-FKELGSDYLITLETAESNDEMTVEVELSQLFTDDYGRLQALTREITRQLKDEILV 80 (109)
T ss_dssp HHHHHHHHT-CTTEEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHh-CCCcccceEEEEeccccceeEEEEEEEeeccccccchhhhhHHHHHHHHHHHhCC
Confidence 345566766 798876655555555555445555555543 45566678888898888754344
No 24
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=38.14 E-value=47 Score=21.04 Aligned_cols=42 Identities=19% Similarity=0.135 Sum_probs=28.7
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcCCC--cceEEEEeeccc
Q 020595 272 VDIVLPASMPLQEAHDIGESLQEKLELLPE--IERAFVHLDYEY 313 (324)
Q Consensus 272 ~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~--v~~v~i~i~p~~ 313 (324)
++|.+.+..+.++-.++.+.+-+.+.+..+ -.++.|.++..+
T Consensus 4 i~i~~~~g~s~eqk~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~ 47 (64)
T 3abf_A 4 LKVTLLEGRPPEKKRELVRRLTEMASRLLGEPYEEVRVILYEVR 47 (64)
T ss_dssp EEEEEETTCCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcC
Confidence 445554556888888899999888864333 346888876644
No 25
>2kjw_A TS9, 30S ribosomal protein S6; S6 permutant, solution structure, backbone dynamics, folding, ribonucleoprotein, RNA-binding, rRNA-binding; NMR {Thermus thermophilus}
Probab=36.81 E-value=1e+02 Score=22.04 Aligned_cols=69 Identities=17% Similarity=0.090 Sum_probs=49.2
Q ss_pred HHhhcCCCCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcC
Q 020595 227 NSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELL 299 (324)
Q Consensus 227 ~~Ll~~~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~ 299 (324)
..+++-..+++..+++.+.+.= .+.|...--+++ .....-+.-+.++|+++-++..++.+++++.|.+.
T Consensus 7 Y~~~~~~a~~~~v~eler~~r~-~e~vlR~l~v~~---e~Mr~YE~m~Il~P~l~ee~~~~~ve~~~~iI~~~ 75 (96)
T 2kjw_A 7 FLWYQVEMPEDRVNDLARELRI-RDNVRRVMVVAS---TTPGRYEVNIVLNPNLDQSQLALEKEIIQRALENY 75 (96)
T ss_dssp CEEECCCCCHHHHHHHHHHHHH-CTTCSEEEEEEC---SSSSCEEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecChhHHHHHHHHhcc-chhhhhhhheeh---hhhhhhheeeeeCCCCCHHHHHHHHHHHHHHHHhC
Confidence 3456677789999999998864 455554433333 32222355556899999999999999999999753
No 26
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=35.80 E-value=78 Score=24.00 Aligned_cols=62 Identities=16% Similarity=0.236 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
++..+++.+.+.+ .|+|..++. ..|+. +.+.++ .+ +. +++.+-+.+.|.+.|+|.++...+-
T Consensus 75 ~~~~~~~~~~l~~-~p~V~~~~~----~tG~~d~~~~v~--~~---d~---~~l~~~l~~~l~~~~gV~~~~t~iv 137 (150)
T 2pn6_A 75 KNYHVELGNKLAQ-IPGVWGVYF----VLGDNDFIVMAR--YK---TR---EEFMEKFLERVMSIPEVERTSTQVV 137 (150)
T ss_dssp TTHHHHHHHHHHT-STTEEEEEE----CSSSCSEEEEEE--ES---SH---HHHHHHTHHHHTTCTTEEEEEEEEC
T ss_pred hhHHHHHHHHHhc-Cchhhhhhh----hcCcCCEEEEEE--EC---CH---HHHHHHHHHHhccCCCeeEEEEEEE
Confidence 6778888888887 888866543 23654 555444 33 22 3455555577888899987776654
No 27
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=35.42 E-value=1.2e+02 Score=21.73 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=11.8
Q ss_pred EEEEEEEcCCCCCHHHHHHHHH
Q 020595 269 FVEVDIVLPASMPLQEAHDIGE 290 (324)
Q Consensus 269 ~v~~~i~v~~~~t~~~~~~i~~ 290 (324)
.|.+++.++++++.+++.++..
T Consensus 4 lV~m~V~~P~~~~~~~~~~~~a 25 (96)
T 1mli_A 4 HVKMTVKLPVDMDPAKATQLKA 25 (96)
T ss_pred EEEEEeeCCCCCCHHHHHHHHH
Confidence 4555555555555555554443
No 28
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=33.58 E-value=36 Score=23.13 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=22.1
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 020595 92 YQYPIGKKRMQPLGILVFASVMATLGLQIILE 123 (324)
Q Consensus 92 ~~~p~G~~r~E~l~~l~~~~~l~~~~~~i~~~ 123 (324)
..|.|-|+.+.. ++|+.+.+++.+|+.++..
T Consensus 10 dpF~YDY~tLRi-gGLifA~vLfi~GI~iilS 40 (74)
T 2zxe_G 10 ERFTYDYYRLRV-VGLIVAAVLCVIGIIILLA 40 (74)
T ss_dssp GGGCCCHHHHHH-HHHHHHHHHHHHHHHHHTT
T ss_pred CCcccchHHhee-ccchhHHHHHHHHHHHHHc
Confidence 455566666655 7888888888888877653
No 29
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=33.41 E-value=89 Score=23.79 Aligned_cols=63 Identities=13% Similarity=0.136 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
+++..+++.+.+.+ .|+|..++. ..|+. +.+.++. + +.++ +.+-+ +.+.+.|+|.++..++--
T Consensus 76 ~~~~~~~~~~~l~~-~p~V~~~~~----~tG~~d~~~~v~~--~---d~~~---l~~~~-~~l~~~~gV~~~~t~ivl 139 (151)
T 2cyy_A 76 KAGKYSEVASNLAK-YPEIVEVYE----TTGDYDMVVKIRT--K---NSEE---LNNFL-DLIGSIPGVEGTHTMIVL 139 (151)
T ss_dssp CTTCHHHHHHHHHT-CTTEEEEEE----CSSSSSEEEEEEE--S---SHHH---HHHHH-HHHHTSTTEEEEEEEECC
T ss_pred CcccHHHHHHHHhc-CCCeeEeeE----ecCCCCEEEEEEE--C---CHHH---HHHHH-HHHhCCCCEeEEEEEEEE
Confidence 45677888888887 888876643 23654 6555544 3 3333 44444 677888999877766643
No 30
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=32.53 E-value=1.6e+02 Score=23.20 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAF 306 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~ 306 (324)
.+..+.+|...+.+ .| .++..+.+......-...+.+.++.+ .+..+++.+.|++.++|.+|.
T Consensus 13 rpGvLarIt~lfs~--rg-~NI~Sl~v~~t~d~~~sriti~V~~d------~~~leqI~kqL~Kl~dV~~V~ 75 (164)
T 2f1f_A 13 ESGALSRVIGLFSQ--RG-YNIESLTVAPTDDPTLSRMTIQTVGD------EKVLEQIEKQLHKLVDVLRVS 75 (164)
T ss_dssp CTTHHHHHHHHHHT--TT-CCCSEEEEEECSCSSEEEEEEEEESC------HHHHHHHHHHHHHSTTEEEEE
T ss_pred CCcHHHHHHHHHHH--CC-CCeeeceeeecCCCCEEEEEEEEecc------HHHHHHHHHHHcCCCCEEEEE
Confidence 45788889888876 34 56778887765432233344444433 456777888888888887765
No 31
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=32.31 E-value=1.3e+02 Score=21.24 Aligned_cols=66 Identities=14% Similarity=0.043 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCC-C-CHHHHHHHHHHHHHHHHcCCCcceEEEE
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPAS-M-PLQEAHDIGESLQEKLELLPEIERAFVH 308 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~-~-t~~~~~~i~~~i~~~l~~~~~v~~v~i~ 308 (324)
+-+++++.+.+++..+.-......+..-.|=+ ..+.+.+.++++ . +. +.+++.+++..+|+++.|.
T Consensus 18 etDl~~L~~~vk~~~~~gl~w~~~k~~pIafGlk~L~i~~vveD~~~~~t-------D~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 18 DVNLDELEEKLKKVIPEKYGLAKVEREPIAFGLVALKFYVLGRDEEGYSF-------DEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp TSCHHHHHHHHHHHSCTTCEEEEEEEEECTTSCEEEEEEEEECSSTTCCH-------HHHHHHHHHSTTEEEEEEE
T ss_pred CCCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEECCCcccc-------HHHHHHHhcCCCceEEEEE
Confidence 34555555555554444456777777777755 567777777654 2 33 4666677776788887764
No 32
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=30.31 E-value=1.5e+02 Score=21.14 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=37.2
Q ss_pred HHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEe
Q 020595 239 LQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHL 309 (324)
Q Consensus 239 ~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i 309 (324)
=+.|++.+.+ -|+.+|.++|+ |..+.+++. .+ +.+++.+..+++-+.|-..|-+.+..+++
T Consensus 33 G~aV~~aL~~--LG~~~V~~VR~---GK~~el~~~--~~---~~~~a~~~v~~mc~kLLaNpVIE~y~ie~ 93 (94)
T 1vq3_A 33 GETIERVLRE--EKGLPVKKLRL---GKSIHLEVE--AE---NKEKAYEIVKKACEELLVNPVVEEYEVRE 93 (94)
T ss_dssp HHHHHHHHHH--TTCCCEEEEEE---EEEEEEEEE--CS---SHHHHHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred HHHHHHHHHH--cCCCccceeee---eeEEEEEec--CC---CHHHHHHHHHHHHHHHcCCCcceEEEEEe
Confidence 3556667765 36677777776 555555543 22 34666666666666665557777766653
No 33
>2r4f_A 3-hydroxy-3-methylglutaryl-coenzyme A reductase; oxidoreductase, cholesterol, biocynthesis, HMG-COA, NADPH, statin, alternative splicing; HET: RIE; 1.70A {Homo sapiens} PDB: 2q1l_A* 2q6c_A* 2q6b_A* 3bgl_A* 3cct_A* 3ccw_A* 3ccz_A* 3cd0_A* 3cd5_A* 3cd7_A* 3cda_A* 3cdb_A* 1dqa_A* 1dq9_A* 1dq8_A* 1hw8_A* 1hw9_A* 1hwi_A* 1hwj_A* 1hwk_A* ...
Probab=28.42 E-value=3.5e+02 Score=25.06 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHc-CCCcceEEEEeeccc
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEY 313 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~-~~~v~~v~i~i~p~~ 313 (324)
++..+++++...+ ....-+..+++.+..|+.+++.+.+..-+.|-.--.....+.+-+.|++ .++. ..+-+.-.+
T Consensus 178 ~~~~~~l~~~~~s-tsr~g~l~~i~~~~~g~~l~lrf~~~TgDAMG~NMvn~~~E~v~~~l~~~~~~~--~~~sIsgN~ 253 (441)
T 2r4f_A 178 SEGFAVIKEAFDS-TSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEM--QILAVSGNY 253 (441)
T ss_dssp HHHHHHHHHHHHT-TCSSCEECCCEEEEETTEEEEEEEEECTTBCCHHHHHHHHHHHHHHHHHHCTTC--EEEESCCSC
T ss_pred hhhHHHHHHHhhh-cccccccceEEEEeeCCEEEEEEEEecchhhcchhHHHHHHHHHHHHHhhCCCC--eEEEEecCC
Confidence 4556666666555 4555677888999899989899998888878766667777777777764 4543 344444443
No 34
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=27.45 E-value=1e+02 Score=19.05 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=27.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcC--CCcceEEEEeecc
Q 020595 272 VDIVLPASMPLQEAHDIGESLQEKLELL--PEIERAFVHLDYE 312 (324)
Q Consensus 272 ~~i~v~~~~t~~~~~~i~~~i~~~l~~~--~~v~~v~i~i~p~ 312 (324)
++|.+.+..+.++-.++.+.+.+.+.+. ..-.+++|.+++.
T Consensus 6 i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p~~~v~v~i~e~ 48 (63)
T 2x4k_A 6 VNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEM 48 (63)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEc
Confidence 3444555568888888999999888642 2334677776654
No 35
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=27.43 E-value=53 Score=22.08 Aligned_cols=32 Identities=28% Similarity=0.448 Sum_probs=23.4
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 020595 92 YQYPIGKKRMQPLGILVFASVMATLGLQIILES 124 (324)
Q Consensus 92 ~~~p~G~~r~E~l~~l~~~~~l~~~~~~i~~~s 124 (324)
..|.|-|+.+.. .+|+.+.+++.+|+.++...
T Consensus 7 dPF~YDY~tLRi-GGLifA~vLfi~GI~iilS~ 38 (72)
T 2jo1_A 7 DPFTYDYQSLQI-GGLVIAGILFILGILIVLSR 38 (72)
T ss_dssp SGGGCSTHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccchHHhhc-cchHHHHHHHHHHHHHHHcC
Confidence 456677777765 77888888888888777653
No 36
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=27.24 E-value=1.2e+02 Score=23.96 Aligned_cols=63 Identities=13% Similarity=0.136 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
+++..+++.+.+.+ .|+|..++. ..|+. +.+.++. + +.++ +.+-+ +.|.+.|+|.++...+--
T Consensus 96 ~~~~~~~v~~~l~~-~peV~~~~~----vtG~~d~l~~v~~--~---d~~~---l~~~l-~~l~~~~gV~~~~t~ivl 159 (171)
T 2e1c_A 96 KAGKYSEVASNLAK-YPEIVEVYE----TTGDYDMVVKIRT--K---NSEE---LNNFL-DLIGSIPGVEGTHTMIVL 159 (171)
T ss_dssp CTTCHHHHHHHHHT-STTEEEEEE----CSSSSSEEEEEEE--S---SHHH---HHHHH-HHHHHSTTEEEEEEEECS
T ss_pred CcchHHHHHHHHhc-CcCeEEEEE----eeCCCCEEEEEEE--C---CHHH---HHHHH-HHHhcCCCcceEEEEEEE
Confidence 45677888888887 888876643 23654 5554443 3 2333 33444 667778899877766643
No 37
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=26.38 E-value=1.5e+02 Score=19.97 Aligned_cols=75 Identities=4% Similarity=-0.013 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecccC
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT 314 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~ 314 (324)
.|....+|.+.+.+ . + .++.++.....++...+.+.+++++...+ +++.+++++.-+++ + +.+++.|...
T Consensus 15 rpGila~vt~~la~-~-~-~NI~~i~~~~~~~~~~~~i~v~~~~~~~l---~~l~~~L~~~~~~~-~---~~~~~~~~~i 84 (91)
T 1zpv_A 15 KSGIVAGVSGKIAE-L-G-LNIDDISQTVLDEYFTMMAVVSSDEKQDF---TYLRNEFEAFGQTL-N---VKINIQSAAI 84 (91)
T ss_dssp CTTHHHHHHHHHHH-T-T-CEEEEEEEEEETTEEEEEEEEEESSCCCH---HHHHHHHHHHHHHH-T---EEEEEEEGGG
T ss_pred CCCHHHHHHHHHHH-c-C-CCEEEEEeEEEcCEEEEEEEEEeCCCCCH---HHHHHHHHHHHHHc-C---CEEEEeeHHH
Confidence 45788899999887 2 3 45667777666666677778888764443 45566665443332 3 4666666544
Q ss_pred CCCcc
Q 020595 315 HRPEH 319 (324)
Q Consensus 315 ~~~~~ 319 (324)
-+..|
T Consensus 85 f~~~~ 89 (91)
T 1zpv_A 85 FEAMY 89 (91)
T ss_dssp TC---
T ss_pred HHHhh
Confidence 44333
No 38
>2i52_A Hypothetical protein; structural genomics, unknown function, PSI, protein structur initiative; 2.08A {Picrophilus torridus} SCOP: d.316.1.1
Probab=26.32 E-value=67 Score=24.09 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEEeeccc
Q 020595 282 LQEAHDIGESLQEKLELLPEIERAFVHLDYEY 313 (324)
Q Consensus 282 ~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~ 313 (324)
.+.++.+.+.+++.++.+|-+.++.|+++ +.
T Consensus 40 ~eta~sLE~AIE~si~~QP~v~~v~V~I~-d~ 70 (121)
T 2i52_A 40 SENASMAEEFIERSTMIQPFVENVRISIN-NV 70 (121)
T ss_dssp TTTHHHHHHHHHHHHTTSTTEEEEEEEEC-CC
T ss_pred cccHHHHHHHHHHHHhcCCceEEEEEEEe-hh
Confidence 35567788889999998899999999998 54
No 39
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=26.05 E-value=1.2e+02 Score=22.53 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
+++..+++.+.+.+ .|+|..++.. .|+. +.+ ++.++ +.+ ++.+-+.+.+.+.|+|.++..++-
T Consensus 73 ~~~~~~~~~~~l~~-~~~v~~~~~~----~G~~d~~~--~v~~~---d~~---~l~~~~~~~l~~~~gV~~~~t~iv 136 (141)
T 1i1g_A 73 KPEKLFEVAEKLKE-YDFVKELYLS----SGDHMIMA--VIWAK---DGE---DLAEIISNKIGKIEGVTKVCPAII 136 (141)
T ss_dssp CGGGHHHHHHHHHH-STTEEEECCC----SSSSSEEE--EEEES---SHH---HHHHHHHHTTTTSTTEEEEEEEEC
T ss_pred CchhHHHHHHHHhc-CCCeEEEEEe----cCCCCEEE--EEEEC---CHH---HHHHHHHHHhhcCCCEeEEEEEEE
Confidence 55677888888887 8888766542 4654 544 44443 233 344444467777899987776653
No 40
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=25.83 E-value=45 Score=23.16 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
++...+++.+.+.+ .|+|.+++.+ .|+. +.+.+.. + +.++ +.+-+.+.|.+.|+|.++..++-
T Consensus 11 ~~~~~~~~~~~l~~-~peV~~~~~v----tG~~D~ll~v~~--~---d~~~---l~~~l~~~l~~~~gV~~~~T~iv 74 (92)
T 2djw_A 11 RGNRVQALGEAIAE-LPQVAEVYSV----TGPYDLVALVRL--K---DVEE---LDDVVTQGILSLEGVERTETLLA 74 (92)
T ss_dssp CGGGHHHHHHHHTT-STTEEEEEEE----SSSSSEEEEEEE--S---SGGG---HHHHCCCCCTTSTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHhc-CCCeEEEEEe----ecCCCEEEEEEE--C---CHHH---HHHHHHHhcccCCCEeEEEEEEE
Confidence 34456788888877 7887755332 2554 5555444 3 2232 32233445667789887665543
No 41
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=25.62 E-value=1.4e+02 Score=22.95 Aligned_cols=60 Identities=7% Similarity=0.060 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEe
Q 020595 237 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHL 309 (324)
Q Consensus 237 ~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i 309 (324)
+..+++.+.+.+ .|+|..++. ..|+. +.+.++. + +.+ ++.+-+.+.+.+.++|.++...+
T Consensus 83 ~~~~~~~~~l~~-~peV~~~~~----vtG~~d~~~~v~~--~---d~~---~l~~~l~~~l~~~~gV~~~~t~i 143 (162)
T 2p5v_A 83 DAREDFAASVRK-WPEVLSCFA----LTGETDYLLQAFF--T---DMN---AFSHFVLDTLLSHHGVQDAQSSF 143 (162)
T ss_dssp THHHHHHHHHTT-CTTEEEEEE----ESSSCSEEEEEEE--S---SHH---HHHHHHHHTTTTSTTEEEEEEEE
T ss_pred hHHHHHHHHHhc-ChhhhEeee----ecCCCCEEEEEEE--C---CHH---HHHHHHHHHhhcCCCeeEEEEEE
Confidence 457888888876 788775544 23654 5554443 3 233 34444556777788987765544
No 42
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=25.55 E-value=67 Score=21.16 Aligned_cols=40 Identities=5% Similarity=0.056 Sum_probs=26.9
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHcCC--CcceEEEEeecc
Q 020595 273 DIVLPASMPLQEAHDIGESLQEKLELLP--EIERAFVHLDYE 312 (324)
Q Consensus 273 ~i~v~~~~t~~~~~~i~~~i~~~l~~~~--~v~~v~i~i~p~ 312 (324)
+|.+.+..|.++-.++.+.+.+.+.+.. .-.+++|.++..
T Consensus 5 ~I~~~~grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~e~ 46 (72)
T 3mb2_A 5 RITMLEGRSTEQKAELARALSAAAAAAFDVPLAEVRLIIQEV 46 (72)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEc
Confidence 4444456788988999999999886422 224677777653
No 43
>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A
Probab=25.23 E-value=3.2e+02 Score=23.35 Aligned_cols=74 Identities=16% Similarity=0.051 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhcCCCcccc--eeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcC---CCcceEEEEeec
Q 020595 238 YLQKLTYLCWNHHKSIRHI--DTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELL---PEIERAFVHLDY 311 (324)
Q Consensus 238 ~~~~i~~~l~~~~~~v~~v--~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~---~~v~~v~i~i~p 311 (324)
..+.+++.+++ .|++..- ..+.+...|+. +.+.+..-+++.--.+--.++.+++.+.+++. ...-+-++|++.
T Consensus 201 v~~~l~~~~~~-~~~vl~~p~p~v~v~~~~~~~i~~~v~~~~~~~~~~~~~~~l~~~i~~~~~~~gI~ip~P~~~v~~~~ 279 (286)
T 2vv5_A 201 VKQILTNIIQS-EDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKR 279 (286)
T ss_dssp HHHHHHHHHHH-CTTBCTTSCEEEEEEEECSSSEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTCCCCCCEEEEEEEC
T ss_pred HHHHHHHHHHh-CcccccCCCCEEEEEEecCCeEEEEEEEEEccchHHHHHHHHHHHHHHHHHHCCCcCCCCceEEEecc
Confidence 34445566665 6776432 35667777754 66666665655433344456777777777531 122356677655
Q ss_pred c
Q 020595 312 E 312 (324)
Q Consensus 312 ~ 312 (324)
.
T Consensus 280 ~ 280 (286)
T 2vv5_A 280 V 280 (286)
T ss_dssp C
T ss_pred C
Confidence 3
No 44
>3eb7_A Insecticidal delta-endotoxin CRY8EA1; 2.30A {Bacillus thuringiensis}
Probab=24.63 E-value=2.7e+02 Score=26.68 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH-----HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Q 020595 181 DVITNIIGLVAVLLANYIDDWMDPVGAIILALYTI-----RTWSMTVLENVNSLVGRSAAPEYLQKLTYLCW 247 (324)
Q Consensus 181 D~~~s~~~~i~~~~~~~~~~~~D~i~si~i~~~i~-----~~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~l~ 247 (324)
|++...+++++.+++..-.|.+-++++++-.++=+ ...|..+++.+..|++...++...++....++
T Consensus 5 ~~v~~~i~i~~~ilg~~~vP~vg~~~~~~s~l~~~lwp~~~~~w~~~~~~ve~lIdq~I~~~~~~~a~~~l~ 76 (589)
T 3eb7_A 5 DAVKTAISLVGTILGKLGVPLVGPIVSLYSTLIDVLWPGGKSQWEIFMEQVEALINQKIAEYARAKALAELE 76 (589)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555455555444433225555554433222211 13478899999999999998887776665543
No 45
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=24.32 E-value=99 Score=20.78 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=28.7
Q ss_pred eEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecc
Q 020595 258 TVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYE 312 (324)
Q Consensus 258 ~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~ 312 (324)
.+++.+.|+.+. +++.+... +|..+..+++++.|.. .+-.+|.+.+..+
T Consensus 9 tikiqrdgqeie--idirvstg---keleralqelekalar-agarnvqitisae 57 (96)
T 2jvf_A 9 TIKIQRDGQEIE--IDIRVSTG---KELERALQELEKALAR-AGARNVQITISAE 57 (96)
T ss_dssp EEEEEETTEEEE--EEEECCSS---SHHHHHHHHHHHHHHH-HTCSEEEEEEECS
T ss_pred EEEEeeCCeEEE--EEEEEccc---HHHHHHHHHHHHHHHh-ccccceEEEEEec
Confidence 356666666554 45555533 5667777888888853 1444555555443
No 46
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=24.25 E-value=98 Score=21.85 Aligned_cols=65 Identities=12% Similarity=0.026 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCC-CCHHHHHHHHHHHHHHHHcCCCcceEEEE
Q 020595 237 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPAS-MPLQEAHDIGESLQEKLELLPEIERAFVH 308 (324)
Q Consensus 237 ~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~-~t~~~~~~i~~~i~~~l~~~~~v~~v~i~ 308 (324)
-+++++.+.+++..+.-......+..-.|=+ ..+.+.+.++.+ .+ .+.+++.+++..+|+++.|.
T Consensus 17 tDl~~L~~~vk~~~~~gl~w~~~k~~piafGlk~L~i~~vveD~~~~-------td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 17 VDLEALKKEIQERIPEGTELHKIDEEPIAFGLVALNVMVVVGDAEGG-------TEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp CCHHHHHHHHHHHSCTTSEECCCCEEECSSSCEEEEEEEEESSSCGG-------GGHHHHHHTTSCSSEEEEEE
T ss_pred CCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEEcCCcC-------hHHHHHHHhccCCccEEEEE
Confidence 3445555555443343345566666666654 556777777543 33 35677778887888887764
No 47
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=23.86 E-value=2.6e+02 Score=25.08 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCC---HHHHHHHHHHHHHHHHcC
Q 020595 239 LQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP---LQEAHDIGESLQEKLELL 299 (324)
Q Consensus 239 ~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t---~~~~~~i~~~i~~~l~~~ 299 (324)
..+|++.+.+ .|+|.+..-+-...-+..-.+.+.++.+ +.+ ..+..++.+.+++.|.++
T Consensus 343 p~eiE~~l~~-~p~v~~~~vv~~~~~~~~~~l~a~v~~~-~~~~~~~~~~~~l~~~l~~~l~~~ 404 (436)
T 3qov_A 343 PMQVEKILVQ-FPELGSNYLITLETVNNQDEMIVEVELS-DLSTDNYIELEKIRRDIIRQLKDE 404 (436)
T ss_dssp HHHHHHHHTT-CTTEEEEEEEEEEEETTEEEEEEEEEEC-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CcCcCCcEEEEEEcCCCCcEEEEEEEEc-CccccchhhHHHHHHHHHHHHHHh
Confidence 3578888877 7888755444444444344445555554 322 234677888888888653
No 48
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=23.45 E-value=1.6e+02 Score=23.21 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFV 307 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i 307 (324)
.+..+.+|...+.+ .| .++..+.+......-...+.+.++.+ ++..+++.+.|.+.++|.+|.-
T Consensus 14 rpGvL~rI~~lfs~--rg-~NI~Sl~v~~t~d~g~sritivV~~d------~~~leql~kQL~Kl~dV~~V~~ 77 (165)
T 2pc6_A 14 EAGALSRVAGLFSA--RG-YNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNKLIEVVKLID 77 (165)
T ss_dssp STTHHHHHHHHHHH--HT-CCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCcHHHHHHHHHHH--CC-CcEEEEEEEecCCCCEEEEEEEEecc------HHHHHHHHHHhcCCCCEEEEEE
Confidence 45778888888876 34 46777777655432223344444433 5577788888888888877653
No 49
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=23.43 E-value=57 Score=22.47 Aligned_cols=11 Identities=27% Similarity=0.444 Sum_probs=0.0
Q ss_pred CCCCccccCCC
Q 020595 314 THRPEHAQAHY 324 (324)
Q Consensus 314 ~~~~~~~~~~~ 324 (324)
...++.+||||
T Consensus 68 ~~~~e~~PPHY 78 (78)
T 3efg_A 68 DAADEPPPPHY 78 (78)
T ss_dssp -----------
T ss_pred CCCCCCCccCC
Confidence 34455689999
No 50
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=23.29 E-value=87 Score=19.87 Aligned_cols=40 Identities=5% Similarity=0.006 Sum_probs=26.6
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcCC--CcceEEEEeecc
Q 020595 272 VDIVLPASMPLQEAHDIGESLQEKLELLP--EIERAFVHLDYE 312 (324)
Q Consensus 272 ~~i~v~~~~t~~~~~~i~~~i~~~l~~~~--~v~~v~i~i~p~ 312 (324)
++|.+ +..|.++-.++.+.+.+.+.+.. ...+++|.++..
T Consensus 3 I~I~~-~grt~eqK~~L~~~it~~~~~~lg~~~~~v~V~i~E~ 44 (62)
T 3m20_A 3 LIVYG-PKLDVGKKREFVERLTSVAAEIYGMDRSAITILIHEP 44 (62)
T ss_dssp EEEEC-SCCCHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEECC
T ss_pred EEEEE-CCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEe
Confidence 45555 66789998999999988885411 223566666543
No 51
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=22.19 E-value=1.2e+02 Score=31.49 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCC-CCCHHHHHHHH-HHHHHHHHcCCCcceEEE
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPA-SMPLQEAHDIG-ESLQEKLELLPEIERAFV 307 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~-~~t~~~~~~i~-~~i~~~l~~~~~v~~v~i 307 (324)
.+..+++.+...+ .|+-.+-..+.....++.....+.+.-+. +.+..+..+.+ +++++.|++.|++.+|.+
T Consensus 105 ~~v~~~~~~~~~~-lP~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~ 177 (1057)
T 4dx5_A 105 VQVQNKLQLAMPL-LPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQL 177 (1057)
T ss_dssp HHHHHHHHHHGGG-SCHHHHHHCCEEEEBCSSCSEEEEEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHHhh-CCCccCCCcceeccCCCcceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEe
No 52
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=22.16 E-value=71 Score=21.45 Aligned_cols=40 Identities=8% Similarity=0.055 Sum_probs=26.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcCC--CcceEEEEeec
Q 020595 272 VDIVLPASMPLQEAHDIGESLQEKLELLP--EIERAFVHLDY 311 (324)
Q Consensus 272 ~~i~v~~~~t~~~~~~i~~~i~~~l~~~~--~v~~v~i~i~p 311 (324)
++|.+.+..|.++-.++.+.+.+.+.+.. ...+++|.++.
T Consensus 4 I~I~~~~Grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~E 45 (76)
T 3ej9_A 4 ISCDMRYGRTDEQKRALSAGLLRVISEATGEPRENIFFVIRE 45 (76)
T ss_dssp EEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEE
Confidence 34444455788999999999999986422 23356666543
No 53
>2ogf_A Hypothetical protein MJ0408; structural genomics, unknown function, NYSGXRC, PSI-2, prote structure initiative; HET: MSE OXG; 1.89A {Methanocaldococcus jannaschii}
Probab=21.16 E-value=84 Score=23.55 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 282 LQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 282 ~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
.+.++.+.+.+++.++.+|-+.++.|+++
T Consensus 45 ~eta~sLE~AIE~si~~QP~v~~v~V~I~ 73 (122)
T 2ogf_A 45 KYNKESLERAIEEAMKNQPCVYDIKVKIR 73 (122)
T ss_dssp TTTHHHHHHHHHHHHHTSTTEEEEEEEEC
T ss_pred cccHHHHHHHHHHHHhcCCceEEEEEEEe
Confidence 35567788889999998899999999997
No 54
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=20.86 E-value=2.9e+02 Score=21.17 Aligned_cols=61 Identities=11% Similarity=0.224 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
++..+++.+.+.+ .|+|..++. ..|+. +.+.+.. + +.++ +.+-+.+.+.+.| |.++..++-
T Consensus 76 ~~~~~~~~~~l~~-~peV~~~~~----vtG~~D~~l~v~~--~---d~~~---l~~~l~~~l~~~~-V~~~~T~iv 137 (162)
T 3i4p_A 76 IEWLKRFSEVVSE-FPEVVEFYR----MSGDVDYLLRVVV--P---DIAA---YDAFYKRMIAKIE-IRDVSSAFA 137 (162)
T ss_dssp HHHHHHHHHHHHH-CTTEEEEEE----CCSSCSEEEEEEE--S---SHHH---HHHHHHHHHHHCC-CSEEEEEEC
T ss_pred hHHHHHHHHHHhc-CCCEEEeee----cCCCCCEEEEEEE--C---CHHH---HHHHHHHHhhcCC-eeEEEEEEE
Confidence 4678888888887 898876654 24654 6555544 2 3343 4444556667777 887766653
No 55
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=20.72 E-value=2.2e+02 Score=19.70 Aligned_cols=39 Identities=18% Similarity=0.387 Sum_probs=26.9
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHH-cCCCc-ceEEEE
Q 020595 270 VEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEI-ERAFVH 308 (324)
Q Consensus 270 v~~~i~v~~~~t~~~~~~i~~~i~~~l~-~~~~v-~~v~i~ 308 (324)
|++.+.=...++....+.+.+++.++|. .+|+. .+|.|.
T Consensus 3 VEi~~dK~~~lp~ga~~aL~~EL~kRl~~~fpd~~~~V~Vr 43 (81)
T 1ghh_A 3 IEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVR 43 (81)
T ss_dssp EEEEEETTSCCCTTHHHHHHHHHHHHHHHHCSSSCCEEEEE
T ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHhhCCCCCceEEEe
Confidence 4444433446776778899999999997 58876 256654
No 56
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=20.71 E-value=1.9e+02 Score=19.10 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFV 307 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i 307 (324)
.+....+|.+.+.+ .+ .++.+++....++...+.+.+.++.. + -.+++.+.|++.++|.++..
T Consensus 15 r~G~L~~I~~~la~--~~-inI~~i~~~~~~~~~~~~i~v~~~~~---~----~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 15 KNGMTNQITGVISK--FD-TNIRTIVLNAKDGIFTCNLMIFVKNT---D----KLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp CTTHHHHHHHHHTT--SS-SCEEEEEEEECSSEEEEEEEEEESSH---H----HHHHHHHHHTTCTTEEEEEE
T ss_pred CCcHHHHHHHHHHH--CC-CCeEEEEEEEcCCEEEEEEEEEECCH---H----HHHHHHHHHhcCCCceEEEE
Confidence 35678888888876 34 46777777665554445555555431 2 33467778888889877654
No 57
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=20.71 E-value=2.7e+02 Score=21.67 Aligned_cols=58 Identities=9% Similarity=0.178 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 238 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 238 ~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
..+++.+.+.+ .|+|..++ ..|+. +.+.++. +.. +++.+-+.+.|.+.|+|.++. .+-
T Consensus 96 ~~~~~~~~l~~-~peV~~~~-----vtG~~dll~~v~~--~d~------~~l~~~l~~~l~~~~gV~~~~-~iv 154 (171)
T 2ia0_A 96 YISYISSTLSA-LPGVLFVA-----KSGEDKIIALVGK--NNK------DELVKFIEENITSIPNLKHIQ-IFP 154 (171)
T ss_dssp HHHHHHHHHHT-STTEEEEE-----EETTTEEEEEEEE--SST------THHHHHHHHHTTTSTTEEEEE-EEE
T ss_pred HHHHHHHHHHC-CCCeEEEE-----EcCCCCEEEEEEE--CCH------HHHHHHHHHHhhcCCCeeEEE-EEE
Confidence 67888888877 78876654 34754 5555444 322 234445557788889998777 553
No 58
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=20.53 E-value=4.6e+02 Score=23.37 Aligned_cols=59 Identities=5% Similarity=0.015 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCC--HHHHHHHHHHHHHHHHcC
Q 020595 240 QKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP--LQEAHDIGESLQEKLELL 299 (324)
Q Consensus 240 ~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t--~~~~~~i~~~i~~~l~~~ 299 (324)
.+|++.+.+ .|+|.+..-+-+..-+..-.+.+.++.+++.+ ..+..++.+.+++.|.++
T Consensus 346 ~eiE~~l~~-~p~V~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~l~~~ 406 (437)
T 2y27_A 346 TQIEEQLLK-QRALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQVAKQALAYDIKSL 406 (437)
T ss_dssp HHHHHHHTT-CTTBCSCCEEEEEEETTEEEEEEEECBCTTTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CcCcCccEEEEEeecCCCceEEEEEEECCCccchhhhHHHHHHHHHHHHHHh
Confidence 467788877 78887665555444444445666676665532 234567888888888653
Done!