Query 020595
Match_columns 324
No_of_seqs 174 out of 1283
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 05:21:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020595.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020595hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qfia2 f.59.1.1 (A:5-208) Fer 100.0 1.3E-38 9.8E-43 273.3 -32.5 197 30-232 3-204 (204)
2 d3bypa1 d.52.9.1 (A:6-87) Puta 99.6 2.1E-15 1.5E-19 108.5 9.9 77 234-312 2-81 (82)
3 d2qfia1 d.52.9.1 (A:209-290) F 99.5 8.1E-17 5.9E-21 116.2 -1.9 80 233-313 1-80 (82)
4 d2qfia2 f.59.1.1 (A:5-208) Fer 92.5 5.8E-05 4.3E-09 62.1 -14.2 86 37-130 118-203 (204)
5 d2cu6a1 d.52.8.2 (A:6-96) Hypo 78.0 1.7 0.00012 29.5 5.0 46 265-313 35-80 (91)
6 d1dqaa1 d.58.20.1 (A:587-703) 77.0 9.9 0.00072 26.8 10.6 83 235-318 25-108 (117)
7 d1ib8a2 d.52.4.1 (A:1-90) Hypo 70.1 9.2 0.00067 25.6 7.1 44 254-297 26-69 (90)
8 d1sc6a3 d.58.18.1 (A:327-410) 66.3 14 0.001 24.0 8.9 62 235-307 21-82 (84)
9 d1i1ga2 d.58.4.2 (A:62-141) Lp 64.4 5.6 0.00041 25.6 5.0 64 234-309 11-74 (80)
10 d1uwda_ d.52.8.2 (A:) Hypothet 63.7 4.5 0.00032 27.9 4.5 45 267-314 42-86 (102)
11 d1iwga3 d.58.44.1 (A:567-673) 56.2 11 0.00077 25.8 5.5 40 270-309 6-47 (107)
12 d2cg4a2 d.58.4.2 (A:67-152) Re 55.6 17 0.0012 23.6 6.3 63 236-310 13-75 (86)
13 d2i52a1 d.316.1.1 (A:1-120) Hy 47.4 8.1 0.00059 27.2 3.5 33 282-314 39-71 (120)
14 d1rwua_ d.58.54.1 (A:) Hypothe 43.3 36 0.0026 22.1 6.4 61 235-305 24-86 (87)
15 d2cyya2 d.58.4.2 (A:65-150) Pu 41.4 34 0.0025 21.7 6.1 61 236-310 13-74 (86)
16 d1fftb2 f.17.2.1 (B:27-117) Cy 37.9 15 0.0011 24.5 3.6 44 79-122 37-83 (91)
17 d1ygya3 d.58.18.1 (A:452-529) 37.5 20 0.0015 22.8 4.2 61 235-306 13-73 (78)
18 d1iwga1 d.58.44.1 (A:38-134) M 37.3 15 0.0011 24.6 3.7 57 235-296 17-74 (97)
19 d1mlia_ d.58.4.1 (A:) Muconala 34.1 24 0.0017 23.8 4.1 24 268-291 3-26 (96)
20 d2pc6a2 d.58.18.6 (A:1-77) Ace 30.9 60 0.0044 20.6 5.9 62 235-305 12-73 (77)
21 d2ieca1 d.316.1.1 (A:11-123) H 26.6 29 0.0021 24.0 3.5 32 281-312 28-59 (113)
22 d1dlca3 f.1.3.1 (A:61-289) del 26.2 1E+02 0.0075 23.6 7.6 32 217-248 44-75 (229)
23 d1u8sa1 d.58.18.5 (A:2-87) put 26.2 75 0.0054 20.1 6.8 42 235-279 15-56 (86)
24 d1gh8a_ d.58.12.1 (A:) aEF-1be 25.8 41 0.003 22.1 4.2 65 238-308 18-83 (89)
25 d1qupa2 d.58.17.1 (A:2-73) Cop 24.4 23 0.0017 22.1 2.5 26 286-311 17-42 (72)
26 d1q8ba_ d.58.4.6 (A:) Hypothet 23.9 88 0.0064 20.2 7.2 46 267-312 2-47 (93)
27 d1otga_ d.80.1.2 (A:) 5-carbox 23.3 1.1E+02 0.008 21.1 8.1 61 236-298 18-89 (125)
28 d2aw0a_ d.58.17.1 (A:) Menkes 23.1 24 0.0017 21.9 2.4 25 286-310 15-39 (72)
29 d1zpva1 d.58.18.7 (A:1-83) UPF 23.1 84 0.0061 19.6 9.1 49 235-286 12-60 (83)
30 d1wh9a_ d.52.3.1 (A:) Ribosoma 23.0 96 0.007 20.3 8.4 60 237-297 7-69 (92)
31 d1p6ta1 d.58.17.1 (A:1-72) Pot 22.8 24 0.0017 21.9 2.4 24 287-310 19-42 (72)
32 d1tr0a_ d.58.4.4 (A:) Boiling 22.6 99 0.0072 20.3 7.1 39 272-310 11-49 (106)
33 d1cpza_ d.58.17.1 (A:) Copper 22.2 27 0.002 21.4 2.5 24 287-310 13-36 (68)
34 d2f1fa1 d.58.18.6 (A:2-77) Ace 21.3 94 0.0068 19.5 7.4 62 235-305 11-72 (76)
35 d1t4aa_ d.284.1.1 (A:) PurS su 21.1 97 0.0071 19.6 6.5 62 238-310 18-79 (80)
36 d3dtub2 f.17.2.1 (B:30-129) Ba 20.8 1.1E+02 0.0079 20.1 7.2 25 97-121 67-91 (100)
37 d1ghha_ d.57.1.1 (A:) DNA dama 20.6 1E+02 0.0074 19.7 5.6 40 269-308 2-43 (81)
38 d1i5pa3 f.1.3.1 (A:1-263) delt 20.6 76 0.0055 25.2 5.7 61 187-247 54-118 (263)
39 d1mwza_ d.58.17.1 (A:) Metal i 20.3 32 0.0023 21.3 2.6 25 286-310 15-39 (73)
No 1
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=1.3e-38 Score=273.34 Aligned_cols=197 Identities=20% Similarity=0.232 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHHH
Q 020595 30 RSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVF 109 (324)
Q Consensus 30 ~~~~~~~~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~~ 109 (324)
|..+|+.++++++|+++++.|+++|+++||.||++||+|++.|++++++++++.+.++||||++|||||+|+|+++++++
T Consensus 3 r~~~r~~~~~~~~n~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~ 82 (204)
T d2qfia2 3 RLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQ 82 (204)
T ss_dssp SSSSTTSHHHHGGGTTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccCCcchhHHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHH----HHhcCHHHHHhHHHhhhhHHHH
Q 020595 110 ASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC----RAFTNEIVKAYAQDHFFDVITN 185 (324)
Q Consensus 110 ~~~l~~~~~~i~~~si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~----~~~~s~~l~a~~~~~~~D~~~s 185 (324)
+++++++++++++++++++++|++. ....+++.+.+++++++..++++. |+.+|++++++++|++.|.++|
T Consensus 83 ~~~l~~~~~~~~~~si~~l~~~~~~-----~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s 157 (204)
T d2qfia2 83 SMFISGSALFLFLTGIQHLISPTPM-----TDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMN 157 (204)
T ss_dssp TTTTSSSTTGGGSSCTTSSTTTSSS-----STTTSCCCCCGGGSSCGGGGTTTHHHHGGGCCSTTSGGGGGGHHHHTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-----cccHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999998774 223344445555666666655544 4578999999999999999998
Q ss_pred HHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 020595 186 IIGLVAVLLANYID-DWMDPVGAIILALYTIRTWSMTVLENVNSLVGR 232 (324)
Q Consensus 186 ~~~~i~~~~~~~~~-~~~D~i~si~i~~~i~~~~~~~~~~s~~~Ll~~ 232 (324)
. +++.+++..+++ +|+||++++++++++++.+++++|++.+.|+|+
T Consensus 158 ~-~vii~~~~~~~~~~~~D~i~aiii~~~i~~~~~~~~~~~~~~Lld~ 204 (204)
T d2qfia2 158 G-AILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDR 204 (204)
T ss_dssp S-TTCCCTTSSCSSTTSSSSSSHHHHTTTTTTTTTTHHHHTGGGSSCC
T ss_pred H-HHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4 555565556666 799999999999999999999999999999985
No 2
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}
Probab=99.60 E-value=2.1e-15 Score=108.50 Aligned_cols=77 Identities=21% Similarity=0.440 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHhcCC--CcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH-cCCCcceEEEEee
Q 020595 234 AAPEYLQKLTYLCWNHHK--SIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEIERAFVHLD 310 (324)
Q Consensus 234 ~~~~~~~~i~~~l~~~~~--~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~-~~~~v~~v~i~i~ 310 (324)
.||+..++|++.+++ .+ ++.++|++|+|+.|+++++++|+++|+++|+.++|++++++++.|+ ++|++ +++||+|
T Consensus 2 lp~e~~~~I~~~i~~-~~~~~vv~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~i~~~ve~~i~~~~~~~-~v~vHve 79 (82)
T d3bypa1 2 LPPEEVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QATIHVE 79 (82)
T ss_dssp CCHHHHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTE-EEEEEEE
T ss_pred cCHHHHHHHHHHHHh-CCCCCceeeeEEEeeEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCC-EEEEEeC
Confidence 578999999999987 56 4569999999999999999999999999999999999999999997 56665 8999999
Q ss_pred cc
Q 020595 311 YE 312 (324)
Q Consensus 311 p~ 312 (324)
|+
T Consensus 80 P~ 81 (82)
T d3bypa1 80 PE 81 (82)
T ss_dssp EC
T ss_pred CC
Confidence 96
No 3
>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}
Probab=99.55 E-value=8.1e-17 Score=116.23 Aligned_cols=80 Identities=15% Similarity=0.222 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecc
Q 020595 233 SAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYE 312 (324)
Q Consensus 233 ~~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~ 312 (324)
++|++..++|++.+.+ .|||.++|++|+|+.|+.+++++|+++++++|++++|++.+++++.|++.+++.+++||+||+
T Consensus 1 alP~e~~~~I~~~i~~-~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~I~~~ie~~l~~~~~~~~v~iHveP~ 79 (82)
T d2qfia1 1 ALPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPC 79 (82)
T ss_dssp CCCTTHHHHHHHHHTT-SSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCGGGHHHHHHHHHHTTSSSCCSSCBCCCCCS
T ss_pred CcCHHHHHHHHHHHHc-CCCceeeeEEEEEEeCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCc
Confidence 3577899999999987 899999999999999999999999999999999999999999999998655566999999996
Q ss_pred c
Q 020595 313 Y 313 (324)
Q Consensus 313 ~ 313 (324)
.
T Consensus 80 ~ 80 (82)
T d2qfia1 80 S 80 (82)
T ss_dssp C
T ss_pred c
Confidence 4
No 4
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}
Probab=92.47 E-value=5.8e-05 Score=62.10 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 020595 37 RISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATL 116 (324)
Q Consensus 37 ~~s~~~~~~~~i~~~~~g~~~~S~aL~ada~hs~~D~~~~~~~l~~~~~s~r~~~~~~p~G~~r~E~l~~l~~~~~l~~~ 116 (324)
.++++++..+...+.-.+-..+|.++.+|+.|+..|+++++.++.+..... +|+..++++++++.+++++..
T Consensus 118 ~~~~~~~~~l~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s~~vii~~~~~~--------~~~~~~D~i~aiii~~~i~~~ 189 (204)
T d2qfia2 118 IVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILYS 189 (204)
T ss_dssp GGGSSCGGGGTTTHHHHGGGCCSTTSGGGGGGHHHHTCCSSTTCCCTTSSC--------SSTTSSSSSSHHHHTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hCchhhhHHHHHHHHHHHHHH
Confidence 345556666666777778889999999999999999999887776654322 578889999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 020595 117 GLQIILESLRTLVS 130 (324)
Q Consensus 117 ~~~i~~~si~~l~~ 130 (324)
++.+++++++.|++
T Consensus 190 ~~~~~~~~~~~Lld 203 (204)
T d2qfia2 190 ALRMGYEAVQSLLD 203 (204)
T ss_dssp TTTHHHHTGGGSSC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988875
No 5
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}
Probab=77.97 E-value=1.7 Score=29.50 Aligned_cols=46 Identities=26% Similarity=0.537 Sum_probs=33.4
Q ss_pred CCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeeccc
Q 020595 265 GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEY 313 (324)
Q Consensus 265 G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~ 313 (324)
|++..+.+.+..+ ..+. .+.+.+++++++++.+++.+|.|++..++
T Consensus 35 ~~~v~v~l~lt~~-~cp~--~~~i~~~i~~al~~l~gv~~V~V~~~~~p 80 (91)
T d2cu6a1 35 PPRAYVRMTLTTP-GCPL--HDSLGEAVRQALSRLPGVEEVEVEVTFEP 80 (91)
T ss_dssp TTEEEEEECCSSS-SCCS--SCHHHHHHHHHHHTSTTCCEEEEEECCSS
T ss_pred ccccEEEEEcCCC-CCcH--HHHHHHHHHHHHHcCCCCceEEEEEEecC
Confidence 5556666555433 3333 36799999999999999999999986554
No 6
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.04 E-value=9.9 Score=26.82 Aligned_cols=83 Identities=13% Similarity=0.166 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH-cCCCcceEEEEeeccc
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEIERAFVHLDYEY 313 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~-~~~~v~~v~i~i~p~~ 313 (324)
++|..++|++..++ ....-...+++....|+.+++.+.-...+.+..-=.-...+++-+.|+ +.|+...+.+.=+.+.
T Consensus 25 ~~e~~~~ik~~~es-TSr~~rL~~i~~~i~G~~v~lrF~~~TGDA~G~NMvT~at~~a~~~i~~~~p~~~~~~lsGN~ct 103 (117)
T d1dqaa1 25 TSEGFAVIKEAFDS-TSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSGNYCT 103 (117)
T ss_dssp SHHHHHHHHHHHHT-TCSSEEEEEEEEEEETTEEEEEEEEEETTBCCHHHHHHHHHHHHHHHHHHCTTCEEEESCCSSSC
T ss_pred ChhhHHHHHHHHHc-cCccEEecccEEEEECCEEEEEEEEEccchhhchHHHHHHHHHHHHHHHhCCCCeEEEEeccccc
Confidence 46778889998887 677788899999999999999999988776654334445555555554 5777765554434444
Q ss_pred CCCCc
Q 020595 314 THRPE 318 (324)
Q Consensus 314 ~~~~~ 318 (324)
+.+++
T Consensus 104 DKK~s 108 (117)
T d1dqaa1 104 DKKPA 108 (117)
T ss_dssp CSSCC
T ss_pred cchhh
Confidence 55544
No 7
>d1ib8a2 d.52.4.1 (A:1-90) Hypothetical protein SP14.3 (SP0552) {Streptococcus pneumoniae [TaxId: 1313]}
Probab=70.10 E-value=9.2 Score=25.60 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=38.6
Q ss_pred ccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 020595 254 RHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE 297 (324)
Q Consensus 254 ~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~ 297 (324)
..+.++...+.|+...+.+.|.-+..+++++..++.+.+...|.
T Consensus 26 ~eL~~ve~~~~~~~~~l~I~ID~~~gv~iddC~~vSr~is~~LD 69 (90)
T d1ib8a2 26 FELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLD 69 (90)
T ss_dssp SEEEEEEEEEETTEEEEEEEEECSSCCCHHHHHHHHHHHGGGTT
T ss_pred CEEEEEEEEeCCCCEEEEEEEECCCCcCHHHHHHHHHHHHHHhc
Confidence 56778888888888888888888888999999999999999886
No 8
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=66.33 E-value=14 Score=24.02 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFV 307 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i 307 (324)
.|....+|.+.+.+ .+ ..|.++...+.+..-+..+.+++| .+..+++.+.|++.++|.++.+
T Consensus 21 ~PGvla~I~~~l~~--~~-iNI~~~~~~~~~~~~~a~~~i~~D--------~~~~~~v~~~i~~l~~Vi~vR~ 82 (84)
T d1sc6a3 21 RPGVLTALNKIFAE--QG-VNIAAQYLQTSAQMGYVVIDIEAD--------EDVAEKALQAMKAIPGTIRARL 82 (84)
T ss_dssp CTTHHHHHHHHHHH--TT-CEEEEEEEEECSSEEEEEEEEECC--------HHHHHHHHHHHHTSTTEEEEEE
T ss_pred cCCHHHHHHHHHHH--cC-CCHHHhccccCCCCcEEEEEEECC--------CCCHHHHHHHHHCCCCEEEEEE
Confidence 35678889888877 34 467777777777665556667765 2355777888999999876643
No 9
>d1i1ga2 d.58.4.2 (A:62-141) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=64.39 E-value=5.6 Score=25.63 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEe
Q 020595 234 AAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHL 309 (324)
Q Consensus 234 ~~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i 309 (324)
.+|+..+++.+.+.+ .|+|.+++.+ .|+. -.-+++.++. .+++.+-+.+.|.+.|||.++.-++
T Consensus 11 v~~~~~~~v~~~l~~-~peV~~~~~v----tG~~-D~~~~v~~~d------~~~l~~~l~~~i~~~~gV~~~~t~i 74 (80)
T d1i1ga2 11 TKPEKLFEVAEKLKE-YDFVKELYLS----SGDH-MIMAVIWAKD------GEDLAEIISNKIGKIEGVTKVCPAI 74 (80)
T ss_dssp ECGGGHHHHHHHHHH-STTEEEECCC----SSSS-SEEEEEEESS------HHHHHHHHHHTTTTSTTEEEEEEEE
T ss_pred ECcCcHHHHHHHHHc-CCCEeEEEEE----CCCC-CEEEEEEECC------HHHHHHHHHhhhccCCCEEEEEEEE
Confidence 356778888899987 8988766433 2443 3334444442 2556666778888889998876655
No 10
>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}
Probab=63.68 E-value=4.5 Score=27.95 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=32.6
Q ss_pred eEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecccC
Q 020595 267 HYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT 314 (324)
Q Consensus 267 ~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~ 314 (324)
...+.+.+..+ ..+. .+.+.+++++.+++.+++.+|.|++..++.
T Consensus 42 ~V~v~~~lt~~-~Cp~--~~~i~~~i~~al~~~~gV~~v~V~i~~~p~ 86 (102)
T d1uwda_ 42 NVKVLMTMTTP-MCPL--AGMILSDAEEAIKKIEGVNNVEVELTFDPP 86 (102)
T ss_dssp EEEEEECCSSS-CCSS--HHHHHHHHHHHHHTSSSCCEEEEEECCSSC
T ss_pred ceEEEEecCCC-CCch--HHHHHHHHHHHHHcCCCCceEEEEEEecCC
Confidence 35455544333 3444 478999999999999999999999865543
No 11
>d1iwga3 d.58.44.1 (A:567-673) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=56.23 E-value=11 Score=25.78 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=32.5
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHH--HcCCCcceEEEEe
Q 020595 270 VEVDIVLPASMPLQEAHDIGESLQEKL--ELLPEIERAFVHL 309 (324)
Q Consensus 270 v~~~i~v~~~~t~~~~~~i~~~i~~~l--~~~~~v~~v~i~i 309 (324)
+.+.+..++..|++..++..+++++.+ ++.|++.+++.-.
T Consensus 6 ~~v~~~~P~Gasl~~t~~~~~~v~~~l~~~~~~~v~~~~~~~ 47 (107)
T d1iwga3 6 FMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVN 47 (107)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE
T ss_pred EEEEEECCCCcCHHHHHHHHHHHHHHhhccCCCCeEEEEEEe
Confidence 456778899999999999999999988 4568887765443
No 12
>d2cg4a2 d.58.4.2 (A:67-152) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=55.57 E-value=17 Score=23.56 Aligned_cols=63 Identities=10% Similarity=0.099 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
+...+++.+.+++ .|+|..++.+ .|+ +-+-+++.++. . +++.+-+.+.|.+.|||.+..-++.
T Consensus 13 ~~~~~~~~~~l~~-~peV~~~~~v----tG~-~D~i~~v~~~d---~---~~l~~~i~~~i~~~~gV~~t~T~iv 75 (86)
T d2cg4a2 13 AKDYPSALAKLES-LDEVTEAYYT----TGH-YSIFIKVMCRS---I---DALQHVLINKIQTIDEIQSTETLIV 75 (86)
T ss_dssp GGGHHHHHHHHHT-CTTEEEEEEE----SSS-CSEEEEEEESC---H---HHHHHHHHHTTTTSTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHc-CCCEEEEEEe----cCC-ceEEEEEEECC---H---HHHHHHHHHHhhcCCCEeEEEEEEE
Confidence 4667788888887 8888765432 244 33344454442 2 4556666778888999998766653
No 13
>d2i52a1 d.316.1.1 (A:1-120) Hypothetical protein PTO0218 {Picrophilus torridus [TaxId: 82076]}
Probab=47.45 E-value=8.1 Score=27.20 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEEeecccC
Q 020595 282 LQEAHDIGESLQEKLELLPEIERAFVHLDYEYT 314 (324)
Q Consensus 282 ~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~~~ 314 (324)
.+.+..+...|++.++.+|-+.+++|+++.+..
T Consensus 39 ~~sa~sle~AIeesi~~QPfvedv~V~I~~~~~ 71 (120)
T d2i52a1 39 SENASMAEEFIERSTMIQPFVENVRISINNVKR 71 (120)
T ss_dssp TTTHHHHHHHHHHHHTTSTTEEEEEEEECCC--
T ss_pred hhhHHHHHHHHHHHHhcCCcEEEEEEEEehhhc
Confidence 355677888899999988999999999997543
No 14
>d1rwua_ d.58.54.1 (A:) Hypothetical protein ybeD {Escherichia coli [TaxId: 562]}
Probab=43.27 E-value=36 Score=22.06 Aligned_cols=61 Identities=18% Similarity=0.132 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEe--CCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTF--GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERA 305 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~--G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v 305 (324)
.++..+.|.+.+.++.++. ..+..+.. |...-+++.+.+.. .+-.+.+-+.|++.++|..|
T Consensus 24 ~~~~~~~v~~i~~~~~~~~---~~~~~k~Ss~GkY~Svtv~i~~~s-------~eqv~~iY~~l~~~~~Vkmv 86 (87)
T d1rwua_ 24 LPELVDQVVEVVQRHAPGD---YTPTVKPSSKGNYHSVSITINATH-------IEQVETLYEELGKIDIVRMV 86 (87)
T ss_dssp CTTHHHHHHHHHHHHSSSC---CCEEEEESSCSSEEEEEEEECCSS-------HHHHHHHHHHHSCSSSCEEE
T ss_pred ChhHHHHHHHHHHHhCCCC---CcceeecCCCCcEEEEEEEEEECC-------HHHHHHHHHHHhcCCCEEEe
Confidence 4677888888888765543 33444444 34455555555542 23445666777777777543
No 15
>d2cyya2 d.58.4.2 (A:65-150) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=41.42 E-value=34 Score=21.74 Aligned_cols=61 Identities=11% Similarity=0.127 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
+...+++.+.+.+ .|+|.+++.+ .|+. +.+.+ .++ +.++.+++ + +.|.+.+||.++..++-
T Consensus 13 ~~~~~~v~~~l~~-~peV~~~~~~----tG~~D~~~~v--~~~---~~~~l~~~---~-~~l~~~~gV~~~~T~iv 74 (86)
T d2cyya2 13 AGKYSEVASNLAK-YPEIVEVYET----TGDYDMVVKI--RTK---NSEELNNF---L-DLIGSIPGVEGTHTMIV 74 (86)
T ss_dssp TTCHHHHHHHHHT-CTTEEEEEEC----SSSSSEEEEE--EES---SHHHHHHH---H-HHHHTSTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHC-CCCeEEEEEE----cCCCCEEEEE--EEC---CHHHHHHH---H-HHHhCCCCEeEEEEEEE
Confidence 3456678888877 8888655332 2443 55444 444 34444443 3 45778899988777664
No 16
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=37.92 E-value=15 Score=24.46 Aligned_cols=44 Identities=11% Similarity=0.070 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCCCCCC-C--CccchhhHHHHHHHHHHHHHHHHHHHH
Q 020595 79 LWFTAFSMQTPNPYQY-P--IGKKRMQPLGILVFASVMATLGLQIIL 122 (324)
Q Consensus 79 ~l~~~~~s~r~~~~~~-p--~G~~r~E~l~~l~~~~~l~~~~~~i~~ 122 (324)
.++..|+-+|+.++++ | -|-.++|.+...+-.++++++++....
T Consensus 37 ~~~~~ryR~~~~~~~~~~~~~~n~~lEi~WtiIP~iil~~iav~s~~ 83 (91)
T d1fftb2 37 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK 83 (91)
T ss_dssp HTTTTTTTTSTTTCSSCCCCCCCSHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HhhheeeeccCCccCCCCcccCCceehhhHHHHHHHHHHHHHHHHHH
Confidence 3344455444444443 2 356699999999999998888877543
No 17
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=37.50 E-value=20 Score=22.85 Aligned_cols=61 Identities=11% Similarity=0.072 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAF 306 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~ 306 (324)
.|....+|...+.+ .+ .++..++.-+....-...+.+++|...+ +++.+.|++.+++.++.
T Consensus 13 ~PGvi~~I~~~l~~--~~-iNI~~m~~~~~~~g~~a~~vi~vD~~~~--------~~vl~~I~~~~~V~~v~ 73 (78)
T d1ygya3 13 RPGALGKIGTLLGT--AG-VNIQAAQLSEDAEGPGATILLRLDQDVP--------DDVRTAIAAAVDAYKLE 73 (78)
T ss_dssp CTTHHHHHHHHHHH--TT-CCEEEEEEEECSSSSCEEEEEEESSCCC--------HHHHHHHHHHHTEEEEE
T ss_pred cCCHHHHHHHHHHh--cC-cChhhheeeecCCCCeEEEEEEcCCCcc--------HHHHHHHHcCCCeEEEE
Confidence 45778889888876 34 5677877766544433455566676644 34555666667776654
No 18
>d1iwga1 d.58.44.1 (A:38-134) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=37.32 E-value=15 Score=24.56 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeC-CeEEEEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFG-SHYFVEVDIVLPASMPLQEAHDIGESLQEKL 296 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G-~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l 296 (324)
+++..+.|.+-+++.+.++.++..++.+... +... +.+.++.+.+.++ ...++++++
T Consensus 17 pe~ve~~Vt~plE~~l~~v~gi~~i~S~S~~~G~~~--i~v~f~~~~d~~~---a~~~v~~~v 74 (97)
T d1iwga1 17 AKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQ--ITLTFESGTDADI---AQVQVQNKL 74 (97)
T ss_dssp HHHHHTTTHHHHHHHCCCCSSCCEEEEEEETTTEEE--EEEECCTTCCHHH---HHHHHTTSG
T ss_pred HHHHHHHHhHHHHHHHhCCCCcEEEEEEEccCCcEE--EEEEEeCCCCHHH---HHHHHHHHH
Confidence 4455556666666666777888888887653 3333 4445555555543 344555555
No 19
>d1mlia_ d.58.4.1 (A:) Muconalactone isomerase, MLI {Pseudomonas putida [TaxId: 303]}
Probab=34.06 E-value=24 Score=23.78 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=21.0
Q ss_pred EEEEEEEEcCCCCCHHHHHHHHHH
Q 020595 268 YFVEVDIVLPASMPLQEAHDIGES 291 (324)
Q Consensus 268 ~~v~~~i~v~~~~t~~~~~~i~~~ 291 (324)
+.|++++.++++++.+++.++..+
T Consensus 3 f~V~m~V~~P~~m~~~e~~~i~a~ 26 (96)
T d1mlia_ 3 FHVKMTVKLPVDMDPAKATQLKAD 26 (96)
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHH
Confidence 579999999999999999988754
No 20
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=30.90 E-value=60 Score=20.59 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERA 305 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v 305 (324)
.|..+.+|.....+ .| .++..+.+-.....-.-.+.+.++++ ++..+++.+.|++..+|.+|
T Consensus 12 ~pGvL~Ris~lF~r--Rg-~NI~Sltv~~te~~~iSRmtivv~~~------~~~i~qi~kQL~KlvdVi~V 73 (77)
T d2pc6a2 12 EAGALSRVAGLFSA--RG-YNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNKLIEVVKL 73 (77)
T ss_dssp STTHHHHHHHHHHH--HT-CCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHHSTTEEEE
T ss_pred CccHHHHHHHHHhc--cC-cceEEEEEeccCCCCeEEEEEEEECC------HHHHHHHHHHHhCCcCEEEE
Confidence 35677888877766 34 46777777666544333566666543 34567788888887777554
No 21
>d2ieca1 d.316.1.1 (A:11-123) Hypothetical protein MK0786 {Methanopyrus kandleri [TaxId: 2320]}
Probab=26.64 E-value=29 Score=24.00 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCCcceEEEEeecc
Q 020595 281 PLQEAHDIGESLQEKLELLPEIERAFVHLDYE 312 (324)
Q Consensus 281 t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~ 312 (324)
+.+.+..+...+++.++.+|-+.++.|+++-.
T Consensus 28 s~~sa~sle~AIeesi~~QP~vedv~V~id~~ 59 (113)
T d2ieca1 28 SPGTAEEVAKCIERAALLQPCVIDARVEVDVS 59 (113)
T ss_dssp CGGGHHHHHHHHHHHHTTSTTEEEEEEEECCC
T ss_pred CcccHHHHHHHHHHHHhcCCcEEEEEEEEEee
Confidence 44667888889999999889999999999754
No 22
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=26.22 E-value=1e+02 Score=23.62 Aligned_cols=32 Identities=16% Similarity=-0.026 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Q 020595 217 TWSMTVLENVNSLVGRSAAPEYLQKLTYLCWN 248 (324)
Q Consensus 217 ~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~l~~ 248 (324)
..|+.+.+.+..|++...++...+.....+..
T Consensus 44 ~~w~~~~~~ve~lId~~i~~~~~~~~~~~l~g 75 (229)
T d1dlca3 44 DPWKAFMEQVEALMDQKIADYAKNKALAELQG 75 (229)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34888999999999999988877766655543
No 23
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=26.21 E-value=75 Score=20.14 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCC
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS 279 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~ 279 (324)
.|....++.+.+.+ . | .++.+.+....|......+.++.+++
T Consensus 15 rpGiva~vt~~l~~-~-g-~NI~d~~~~~~~~~~~~~~~v~~~~~ 56 (86)
T d1u8sa1 15 RPGICNEVVRLVTQ-A-G-CNIIDSRIAMFGKEFTLLMLISGSPS 56 (86)
T ss_dssp CTTHHHHHHHHHHH-T-T-CEEEEEEEEEETTEEEEEEEEEECHH
T ss_pred CChHHHHHHHHHHH-C-C-CeEEEeEeEEECCeeEEEEEEEcCcc
Confidence 45788899999887 3 3 46788888888988777778887643
No 24
>d1gh8a_ d.58.12.1 (A:) aEF-1beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.79 E-value=41 Score=22.07 Aligned_cols=65 Identities=12% Similarity=0.020 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCCcccceeEEEEEeCCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEE
Q 020595 238 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVH 308 (324)
Q Consensus 238 ~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~-~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~ 308 (324)
+.+++.+.+++..+.-......+..-++=. ..+.+++.++.+.- -.+.+++.+++..+|+++.|.
T Consensus 18 dl~~l~~~ik~~~~~g~~~~~~~~~PiaFGLk~L~v~~vv~D~~g------~~D~lee~i~~ie~Vqsvev~ 83 (89)
T d1gh8a_ 18 DLEALKKEIQERIPEGTELHKIDEEPIAFGLVALNVMVVVGDAEG------GTEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp CHHHHHHHHHHHSCTTSEECCCCEEECSSSCEEEEEEEEESSSCG------GGGHHHHHHTTSCSSEEEEEE
T ss_pred CHHHHHHHHHhhccCCcEEEEEEEEEEEcceEeEEEEEEEEcCCc------ChHHHHHHHhccCCCcEEEeE
Confidence 344444444443344345566666666644 55666666654321 345678888888889887663
No 25
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.39 E-value=23 Score=22.14 Aligned_cols=26 Identities=12% Similarity=0.215 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHcCCCcceEEEEeec
Q 020595 286 HDIGESLQEKLELLPEIERAFVHLDY 311 (324)
Q Consensus 286 ~~i~~~i~~~l~~~~~v~~v~i~i~p 311 (324)
.....+|++.|++.++|.++.+.++.
T Consensus 17 ~~C~~~Iek~l~~~~gV~~v~vdl~~ 42 (72)
T d1qupa2 17 ENCVNDIKACLKNVPGINSLNFDIEQ 42 (72)
T ss_dssp TTHHHHHHHHHTTCTTEEEEEEETTT
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCC
Confidence 45888999999999999988876543
No 26
>d1q8ba_ d.58.4.6 (A:) Hypothetical protein YjcS {Bacillus subtilis [TaxId: 1423]}
Probab=23.92 E-value=88 Score=20.16 Aligned_cols=46 Identities=9% Similarity=-0.082 Sum_probs=34.6
Q ss_pred eEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEeecc
Q 020595 267 HYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYE 312 (324)
Q Consensus 267 ~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~p~ 312 (324)
.++|...+.+.++...++..+..+++...-++.||-..-.++.+++
T Consensus 2 M~~v~a~~~v~~d~~~~~~~~~l~~l~~~tr~E~Gcl~y~~~~d~~ 47 (93)
T d1q8ba_ 2 MHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCITFHAYPLEP 47 (93)
T ss_dssp EEEEEEEEEECCCSCHHHHHHHHHHHHHHHTTSTTEEEEEEEECCG
T ss_pred eEEEEEEEEECCCCCHHHHHHHHHHHHHHHhCCCCcEEEEEEecCC
Confidence 3678888888888778888888888888777778866666665543
No 27
>d1otga_ d.80.1.2 (A:) 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) {Escherichia coli [TaxId: 562]}
Probab=23.35 E-value=1.1e+02 Score=21.09 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhcCCCcccceeEEEE-------EeC--C--eEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHc
Q 020595 236 PEYLQKLTYLCWNHHKSIRHIDTVRAY-------TFG--S--HYFVEVDIVLPASMPLQEAHDIGESLQEKLEL 298 (324)
Q Consensus 236 ~~~~~~i~~~l~~~~~~v~~v~~l~~~-------~~G--~--~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~ 298 (324)
++..+++...+.+ .|+....++|+| ..| + +-+|.+.+.+-+.-+.++-.++.+.+-+.|++
T Consensus 18 ~~L~~~l~~~~~~--tg~F~~~~IK~Ra~~~~~~~vadg~~~~~Fvhv~l~il~GRs~e~k~~l~~~l~~~l~~ 89 (125)
T d1otga_ 18 PGLFAKVNPTLAA--TGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKT 89 (125)
T ss_dssp HHHHHHHHHHHHT--TSSSCGGGCEEEEEEESSEEETTSCSCEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--CCCCCccccEEeEEEcceEEECCCCCCCeEEEEEeeecCCCCHHHHHHHHHHHHHHHHH
Confidence 4566777777765 688788888876 232 2 36788888888888888889899998888875
No 28
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.12 E-value=24 Score=21.87 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCCcceEEEEee
Q 020595 286 HDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 286 ~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
...+..|++.|++.|||.++.+.+.
T Consensus 15 ~~C~~~Ie~~l~~~~GV~~v~v~~~ 39 (72)
T d2aw0a_ 15 NSCVQSIEGVISKKPGVKSIRVSLA 39 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETT
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4578899999999999998776543
No 29
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.11 E-value=84 Score=19.63 Aligned_cols=49 Identities=4% Similarity=-0.027 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHH
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAH 286 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~ 286 (324)
.|....++.+.+.+ . | .++.++.-...++.....+.+.++++.+.++..
T Consensus 12 rpGiVa~vt~~l~~-~-g-~NI~d~~q~~~~~~f~~~~~v~~~~~~~~~~l~ 60 (83)
T d1zpva1 12 KSGIVAGVSGKIAE-L-G-LNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLR 60 (83)
T ss_dssp CTTHHHHHHHHHHH-T-T-CEEEEEEEEEETTEEEEEEEEEESSCCCHHHHH
T ss_pred CCCHHHHHHHHHHH-C-C-CeEEEEEeEEeCCEEEEEEEEEEecCCCHHHHH
Confidence 45788899999987 3 3 356677766677777788889998887765433
No 30
>d1wh9a_ d.52.3.1 (A:) Ribosomal protein S3 N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.03 E-value=96 Score=20.30 Aligned_cols=60 Identities=5% Similarity=-0.013 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHH
Q 020595 237 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS---MPLQEAHDIGESLQEKLE 297 (324)
Q Consensus 237 ~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~---~t~~~~~~i~~~i~~~l~ 297 (324)
....+|++.+.+.+.. -++.++.+.+......|.+|..=|+- -.-++.+++++.+++.+.
T Consensus 7 ~f~a~Ire~l~k~l~~-Agis~ieI~Rt~~~i~I~I~tarPGivIGrkG~~I~~L~~~l~k~~~ 69 (92)
T d1wh9a_ 7 GFKAELNEFLTRELAE-DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG 69 (92)
T ss_dssp SHHHHHHHHHHHHTTT-TTEEEEEEEECSSCEEEEEEESCHHHHHCGGGHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHh-CCcceEEEEECCCeEEEEEEeCCCceeeccCchhHHHHHHHHHHHHC
Confidence 3456666666654332 56788999999888888888754432 133566777777777764
No 31
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=22.85 E-value=24 Score=21.87 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHcCCCcceEEEEee
Q 020595 287 DIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 287 ~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
....++++.|++.|+|.++.+.+.
T Consensus 19 ~C~~~Ie~~l~~~~gV~~v~v~~~ 42 (72)
T d1p6ta1 19 ACAARIEKGLKRMPGVTDANVNLA 42 (72)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEGG
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 478899999999999988776554
No 32
>d1tr0a_ d.58.4.4 (A:) Boiling stable protein 1 {European aspen (Populus tremula) [TaxId: 113636]}
Probab=22.60 E-value=99 Score=20.28 Aligned_cols=39 Identities=10% Similarity=0.138 Sum_probs=31.0
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 272 VDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 272 ~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
+-..+.++.+-++.+++.+.++....+.|++.++.+-.+
T Consensus 11 Vlfklk~~~~~~~~~~~~~~l~~l~~~ip~i~~~~~G~~ 49 (106)
T d1tr0a_ 11 LLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTD 49 (106)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHhhhcCCceEEEEEEcc
Confidence 445678888989999999999887778999988776643
No 33
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=22.21 E-value=27 Score=21.35 Aligned_cols=24 Identities=13% Similarity=0.246 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHcCCCcceEEEEee
Q 020595 287 DIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 287 ~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
....++++.|++.+||.++.+.++
T Consensus 13 ~C~~~Ie~~l~~~~GV~~v~V~~~ 36 (68)
T d1cpza_ 13 HCVARIEEAVGRISGVKKVKVQLK 36 (68)
T ss_dssp SHHHHHHHHHHTSTTEEEEEEETT
T ss_pred HHHHHHHHHHhcCCCcEEEEEECC
Confidence 367789999999999988776654
No 34
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=21.29 E-value=94 Score=19.54 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceE
Q 020595 235 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERA 305 (324)
Q Consensus 235 ~~~~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v 305 (324)
.|..+.++.....+ .| ..+..+.+-.....-.-.+.+.+.++ ++..+++.+.|.+..+|.+|
T Consensus 11 ~~GVL~RisglF~r--Rg-~NI~Sl~v~~te~~~iSR~tivv~~~------~~~i~qi~kQL~KlidV~~V 72 (76)
T d2f1fa1 11 ESGALSRVIGLFSQ--RG-YNIESLTVAPTDDPTLSRMTIQTVGD------EKVLEQIEKQLHKLVDVLRV 72 (76)
T ss_dssp CTTHHHHHHHHHHT--TT-CCCSEEEEEECSCSSEEEEEEEEESC------HHHHHHHHHHHHHSTTEEEE
T ss_pred CCcHHHHHHHHHHh--cC-cceEEEEEcccCCCCeeEEEEEEECC------HHHHHHHHHHHhCCCCEEEE
Confidence 34677888887765 34 56778887766554444666666654 44667778888877777554
No 35
>d1t4aa_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=21.13 E-value=97 Score=19.64 Aligned_cols=62 Identities=13% Similarity=0.072 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhcCCCcccceeEEEEEeCCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCcceEEEEee
Q 020595 238 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 238 ~~~~i~~~l~~~~~~v~~v~~l~~~~~G~~~~v~~~i~v~~~~t~~~~~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
.-+.|++++.+ -|..++.++|+ |..+.+++ .-++ +++.+..+++-+.|-.-|-+.+-.++++
T Consensus 18 qG~ai~~aL~~--lG~~~v~~vr~---GK~i~l~i--~~~~----~~a~~~v~~~c~~lLaNpvIE~y~i~i~ 79 (80)
T d1t4aa_ 18 QGSAVQHALHS--MTYNEVQDVRI---GKYMELTI--EKSD----RDLDVLVKEMCEKLLANTVIEDYRYEVE 79 (80)
T ss_dssp HHHHHHHHHHH--TTCTTEEEEEE---EEEEEEEE--CCCS----SCHHHHHHHHHHHTTCCTTTEEEEEEEE
T ss_pred HHHHHHHHHHh--cCCcccceEEE---EeEEEEEE--cCCh----HHHHHHHHHHHHHhcCCcceeEEEEEEE
Confidence 34566777765 46667777776 55554444 3222 2344445555555544477777666654
No 36
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=20.79 E-value=1.1e+02 Score=20.05 Aligned_cols=25 Identities=8% Similarity=0.115 Sum_probs=20.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHH
Q 020595 97 GKKRMQPLGILVFASVMATLGLQII 121 (324)
Q Consensus 97 G~~r~E~l~~l~~~~~l~~~~~~i~ 121 (324)
|-.++|.+...+-.++++++++..+
T Consensus 67 ~n~~LEiiWTviP~lILi~l~~pS~ 91 (100)
T d3dtub2 67 HNSPLEIAWTIVPIVILVAIGAFSL 91 (100)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHH
Confidence 4558999999999999988887654
No 37
>d1ghha_ d.57.1.1 (A:) DNA damage-inducible protein DinI {Escherichia coli [TaxId: 562]}
Probab=20.63 E-value=1e+02 Score=19.70 Aligned_cols=40 Identities=18% Similarity=0.351 Sum_probs=27.3
Q ss_pred EEEEEEEcCCCCCHHHHHHHHHHHHHHHH-cCCCc-ceEEEE
Q 020595 269 FVEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEI-ERAFVH 308 (324)
Q Consensus 269 ~v~~~i~v~~~~t~~~~~~i~~~i~~~l~-~~~~v-~~v~i~ 308 (324)
.|++.+.=...++..-.+.+..++.++|. .+|+. .+|.|.
T Consensus 2 RIEl~~dK~~~lp~ga~~aL~~EL~kRl~~~fpD~~~~v~Vr 43 (81)
T d1ghha_ 2 RIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVR 43 (81)
T ss_dssp EEEEEEETTSCCCTTHHHHHHHHHHHHHHHHCSSSCCEEEEE
T ss_pred eEEEEeecccCCCchHHHHHHHHHHHHHHhhCCCCcceEEEe
Confidence 34555543445677778899999999997 58775 245554
No 38
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=20.63 E-value=76 Score=25.18 Aligned_cols=61 Identities=8% Similarity=0.101 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhh-hhhhHHHHHHHHHHHHH---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Q 020595 187 IGLVAVLLANYID-DWMDPVGAIILALYTIR---TWSMTVLENVNSLVGRSAAPEYLQKLTYLCW 247 (324)
Q Consensus 187 ~~~i~~~~~~~~~-~~~D~i~si~i~~~i~~---~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~l~ 247 (324)
+|++++.+....+ +..+++.+.+++++--. ..|..+++.+..|++...++....+....+.
T Consensus 54 vg~i~s~l~~~l~~~~~~~ils~l~~~lwP~~~~~~w~~~~~~vE~LIdqki~~~~~~~a~~~l~ 118 (263)
T d1i5pa3 54 VGTVSSFLLKKVGSLIGKRILSELWGIIFPSGSTNLMQDILRETEQFLNQRLNTDTLARVNAELI 118 (263)
T ss_dssp HHHHHHHHHHHHTSTTCCCCHHHHHHHHSGGGCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHhHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555 45566666666655322 2588899999999999998877776655443
No 39
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.27 E-value=32 Score=21.31 Aligned_cols=25 Identities=8% Similarity=0.177 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHcCCCcceEEEEee
Q 020595 286 HDIGESLQEKLELLPEIERAFVHLD 310 (324)
Q Consensus 286 ~~i~~~i~~~l~~~~~v~~v~i~i~ 310 (324)
...+..|++.|++.++|.++.|.+.
T Consensus 15 ~~C~~~Ie~~l~~~~gV~~v~v~~~ 39 (73)
T d1mwza_ 15 AACARKVENAVRQLAGVNQVQVLFA 39 (73)
T ss_dssp HHHHHHHHHHHHTSSSEEEEEEETT
T ss_pred HHHHHHHHHHHhcCCCceEEEEECC
Confidence 4578899999999999998887754
Done!