BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020599
(324 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 137/235 (58%), Gaps = 11/235 (4%)
Query: 84 LLQNRMLETK-KAALQDSSKFKALARQARNESL-WYGEERPRWLGPIPYDYPSYLTGELP 141
L+ NR L K +AA + + + A A++ + WYG +R +WLGP + P+YLTGE P
Sbjct: 5 LISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFP 64
Query: 142 GDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRV 201
GDYG+D AGLS DP F+KY E++HARWA+LGALG L PE+L EPVW++
Sbjct: 65 GDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKA 124
Query: 202 GYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPG 261
G LDYLG P L A Q ++ Q +LM E R G A E L PG
Sbjct: 125 GAQIFSEGGLDYLGSPALIHA--QNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPG 182
Query: 262 DINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
+ FDPL L+ DP F ELKVKEIKNGRLAM + GF++QA TGKG I
Sbjct: 183 ES-------FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPI 230
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 129/204 (63%), Gaps = 10/204 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
CQ +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 CQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGMI 316
NGRLAM + GF++QA TGKG I
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 132/211 (62%), Gaps = 10/211 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
KA+A+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
ELKVKEIKNGRLAM + GF++QA TGKG
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 137/235 (58%), Gaps = 16/235 (6%)
Query: 85 LQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDY 144
L+ R +K + D +A +S+WYG +RP++LGP PSYLTGE PGDY
Sbjct: 17 LKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDY 76
Query: 145 GFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYS 204
G+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 77 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV-QFGEAVWFKAGAQ 135
Query: 205 KLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCG---IEALEPLGIFLPG 261
LDYLG P +L +Q ++ I Q +LM E R G E L+PL
Sbjct: 136 IFSEGGLDYLGNP--NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPL------ 187
Query: 262 DINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
YPGGA FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA TGKG I
Sbjct: 188 ---YPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 147/256 (57%), Gaps = 20/256 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K A + A+ + S WYG
Sbjct: 3 ASTMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTASK--------AKPVSSSSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKGGSQIFSQGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Query: 239 VGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAM 298
E R G EPLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM
Sbjct: 171 GAVEGYRVAG----EPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAM 223
Query: 299 VAWLGFYIQAAFTGKG 314
+ GF++QA TGKG
Sbjct: 224 FSMFGFFVQAIVTGKG 239
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
R LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF + E+
Sbjct: 41 GRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL EPVW++ G LDYLG P +L +Q
Sbjct: 101 IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQS 158
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ + Q LLM E R G++ + G+ YPGG FDPL L+ DPV F EL
Sbjct: 159 ILAVLGFQVLLMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFAEL 212
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
KVKEIKNGRLAM + GF++QA TGKG
Sbjct: 213 KVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
+ +++ A ++++WYG +RP++LGP + PSYL GE GDYG+D AGLS DP F +
Sbjct: 40 RTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 99
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++HARWAMLGALG L PE+L G E VW++ G LDYLG P L A
Sbjct: 100 LEVIHARWAMLGALGCLTPELLAKSGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA- 157
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP F
Sbjct: 158 -QSILAIWACQVVLMGAVEGYRVAG----GPLGEVT--DPIYPGGS-FDPLGLADDPDTF 209
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
ELKVKEIKNGRLAM + GF++QA TGKG
Sbjct: 210 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 128/204 (62%), Gaps = 10/204 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 AQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGMI 316
NGRLAM + GF++QA TGKG I
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 71 TAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPY 130
+A++ A + L Q+ L K A+ ++ S+WYG +RP++LGP
Sbjct: 4 SAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSD 63
Query: 131 DYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGA 190
PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 64 QIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 191 FHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIE 250
E VW++ G LDYLG P +L +Q ++ I CQ +LM E R G
Sbjct: 124 -KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWACQVVLMGFVEGYRVGG-- 178
Query: 251 ALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAF 310
PLG L D YPGGA FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA
Sbjct: 179 --GPLGEGL--DPIYPGGA-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233
Query: 311 TGKGMI 316
TGKG I
Sbjct: 234 TGKGPI 239
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 145/247 (58%), Gaps = 20/247 (8%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTANK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 178
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G EPLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 179 G----EPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 231
Query: 308 AAFTGKG 314
A TGKG
Sbjct: 232 ALVTGKG 238
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
AR + LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF K E+
Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL+ EPVW++ G LDYLG P +L +Q
Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNP--NLVHAQS 155
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ + Q +LM E R G+ + G+ YPGG FDPL L+ DP F EL
Sbjct: 156 ILAVLGFQVVLMGLVEGFRINGLPGVG------EGNDLYPGGQYFDPLGLADDPTTFAEL 209
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
KVKEIKNGRLAM + GF++QA TGKG
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 142/244 (58%), Gaps = 19/244 (7%)
Query: 72 AVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPY 130
A KA+ SP E+ N + +K A + A+ A + S WYG +R ++LGP
Sbjct: 14 AGKAVKLSPSSSEITGNGRVTMRKTATK--------AKPASSGSPWYGPDRVKYLGPFSG 65
Query: 131 DYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGA 190
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 191 FHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIE 250
E VW++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 126 -KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRIAG-- 180
Query: 251 ALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAF 310
PLG + D YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA
Sbjct: 181 --GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 235
Query: 311 TGKG 314
TGKG
Sbjct: 236 TGKG 239
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 128/204 (62%), Gaps = 10/204 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ +
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAVWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 SQVVLMGLIEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGMI 316
NGRLAM + GF++QA TGKG I
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 143/247 (57%), Gaps = 19/247 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKLSPSSSEITGNGKVTMRKTASK--------AKTVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 179
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 180 G----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232
Query: 308 AAFTGKG 314
A TGKG
Sbjct: 233 AIVTGKG 239
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 141/243 (58%), Gaps = 18/243 (7%)
Query: 72 AVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYD 131
A KA+ N P L+ + + +K A A A+Q + S WYG +R +LGP+ +
Sbjct: 14 AGKAVKNLPSSALIGDARVNMRKTA--------AKAKQVSSSSPWYGSDRVLYLGPLSGE 65
Query: 132 YPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAF 191
PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV- 124
Query: 192 HLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEA 251
E W++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 125 KFGEAGWFKAGSQIFSDGGLDYLGNPSLVHA--QSLLAIWACQVVLMGAVEGYRIAG--- 179
Query: 252 LEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFT 311
PLG + D YPGG+ FDPL L++ P AF ELKVKEIKNGRLAM + GF++QA T
Sbjct: 180 -GPLGEIV--DPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 312 GKG 314
GKG
Sbjct: 236 GKG 238
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 144/247 (58%), Gaps = 11/247 (4%)
Query: 71 TAVKAIANSPLGELLQN-RMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIP 129
T+ A+ ++ G+ L+ L K A + + A +A + S+WYG +RP +LGP
Sbjct: 3 TSTAALTSTFSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFS 62
Query: 130 YDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG 189
PSYL+GE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 63 GSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 122
Query: 190 AFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGI 249
E VW++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 123 V-KFGEAVWFKAGSQIFAEGGLDYLGNPSLVHA--QSILAIWACQVILMGAVEGYRVAG- 178
Query: 250 EALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAA 309
PLG D YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA
Sbjct: 179 ---GPLGEVE--DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 232
Query: 310 FTGKGMI 316
TGKG I
Sbjct: 233 VTGKGPI 239
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K +A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVILMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
ELKVKEIKNGRLAM + GF++QA TGKG
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 128/204 (62%), Gaps = 10/204 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 78 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 134
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 135 SQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 187
Query: 293 NGRLAMVAWLGFYIQAAFTGKGMI 316
NGRLAM + GF++QA TGKG I
Sbjct: 188 NGRLAMFSMFGFFVQAIVTGKGPI 211
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 184 bits (466), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 144/247 (58%), Gaps = 20/247 (8%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTASK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 178
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 179 G----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 231
Query: 308 AAFTGKG 314
A TGKG
Sbjct: 232 AIVTGKG 238
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 136/232 (58%), Gaps = 13/232 (5%)
Query: 86 QNRMLETKKAALQDSSKF---KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPG 142
Q L +Q ++KF K ++ + S WYG +R ++LGP + PSYLTGE PG
Sbjct: 6 QAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 65
Query: 143 DYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVG 202
DYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 66 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAG 124
Query: 203 YSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGD 262
LDYLG P L A Q ++ I CQ +LM E R G PLG D
Sbjct: 125 SQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRIAG----GPLGEVT--D 176
Query: 263 INYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TGKG
Sbjct: 177 PIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 227
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 41 GPDRVKYLGPFSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 97
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 98 GALGCVFPELLSRNGVKFGEAVW 120
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 141/255 (55%), Gaps = 18/255 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F +S E+ N + +K + A+ A + S WYG
Sbjct: 3 ATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTK--------AKPASSSSPWYGP 54
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE P DYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 55 DRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 114
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMV 239
+ PE+ G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 115 VFPELFARNG-IKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMG 171
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
E R G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM
Sbjct: 172 AVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMF 224
Query: 300 AWLGFYIQAAFTGKG 314
+ GF++QA TGKG
Sbjct: 225 SMFGFFVQAIVTGKG 239
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 127/213 (59%), Gaps = 10/213 (4%)
Query: 102 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 161
K A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 162 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 221
E++H RWAMLGALG + PE+ G E VW + G LDYLG P L
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGV-KFGEAVWLKAGSQIFSEGGLDYLGNPSLVH 155
Query: 222 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 281
A Q ++ I CQ LLM E R G PLG+ + D YPGG+ FDPL L++DP
Sbjct: 156 A--QSILAIWACQVLLMGAVEGYRVAG----GPLGVVV--DPLYPGGS-FDPLGLAEDPE 206
Query: 282 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
AF ELKVKE KNGRLAM + GF+IQA TGKG
Sbjct: 207 AFAELKVKETKNGRLAMFSMFGFFIQAIVTGKG 239
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 53 GPDRVKYLGPFSGEAPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG F G+ A+W
Sbjct: 110 GALGCVFPELFARNGVKFGEAVW 132
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 133/220 (60%), Gaps = 12/220 (5%)
Query: 99 DSSKFKALARQARN--ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPM 156
DS + R ++ +S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP
Sbjct: 28 DSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
Query: 157 AFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGI 216
F + E++H+RWAMLGALG + PE+L G E VW++ G LDYLG
Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGN 146
Query: 217 PGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNL 276
P +L +Q ++ I Q +LM E R G PLG L D YPGGA FDPL L
Sbjct: 147 P--NLVHAQSILAIWAVQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGL 197
Query: 277 SKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
+ DP F ELKVKE+KNGRLAM + GF++QA TGKG I
Sbjct: 198 ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
Score = 31.2 bits (69), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + E+ + R AM+
Sbjct: 49 GPDRPKYLGPFS-EQTPSYLTGE--FPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 105
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 106 GALGCVFPEILSKNGVKFGEAVW 128
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 133/220 (60%), Gaps = 12/220 (5%)
Query: 99 DSSKFKALARQARN--ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPM 156
DS + R ++ +S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP
Sbjct: 28 DSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
Query: 157 AFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGI 216
F + E++H+RWAMLGALG + PE+L G E VW++ G LDYLG
Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGN 146
Query: 217 PGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNL 276
P +L +Q ++ I Q +LM E R G PLG L D YPGGA FDPL L
Sbjct: 147 P--NLVHAQSILAIWAVQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGL 197
Query: 277 SKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
+ DP F ELKVKE+KNGRLAM + GF++QA TGKG I
Sbjct: 198 ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
Score = 31.2 bits (69), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + E+ + R AM+
Sbjct: 49 GPDRPKYLGPFS-EQTPSYLTGE--FPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 105
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 106 GALGCVFPEILSKNGVKFGEAVW 128
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
ES+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 46 ESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG PE+L+ G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCTFPELLEKNGV-KFGEAVWFKAGSQIFAEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCG---IEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 289
Q +LM E R G E L+PL YPGGA FDPL L+ DP +F ELKVK
Sbjct: 163 TQVVLMGFVEGYRVGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDSFAELKVK 212
Query: 290 EIKNGRLAMVAWLGFYIQAAFTGKGMI 316
E+KNGRLAM + GF++QA TGKG I
Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 127/207 (61%), Gaps = 10/207 (4%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ ++ S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 43 KTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 103 HCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 159
Query: 228 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 287
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 160 LAIWACQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 212
Query: 288 VKEIKNGRLAMVAWLGFYIQAAFTGKG 314
VKEIKNGRLAM + GF++QA TGKG
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKG 239
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 145/256 (56%), Gaps = 20/256 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTVTK--------AKPLSSGSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Query: 239 VGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAM 298
E R G PLG + D YPGG+ FDPL L++DP AF ELKVK IKNGRLAM
Sbjct: 171 GAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKHIKNGRLAM 223
Query: 299 VAWLGFYIQAAFTGKG 314
+ GF++QA TGKG
Sbjct: 224 FSMFGFFVQAIVTGKG 239
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 126/208 (60%), Gaps = 10/208 (4%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+ G E VW++ G LDYLG P L A Q
Sbjct: 101 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 157
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF EL
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAEL 210
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
KVKEIKNGRLAM + GF++QA TGKG
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKG 238
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 52 GPDRVKYLGPFSGEAPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG F G+ A+W
Sbjct: 109 GALGCVFPELFARNGVKFGEAVW 131
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 143/255 (56%), Gaps = 19/255 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F A KA+ E+ +N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVNVPSSSEITRNGKVTMRKTVTK--------AKPVSSGSPWYGP 53
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RW MLGALG
Sbjct: 54 DRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGC 113
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMV 239
+ PE+ G E VW++ G + LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 VFPELFARNGV-KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA--QSILAIWACQVVLMG 170
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
E R G PLG + D YPGG+ FDPL L+ DP AF EL+VKEIKNGRLAM
Sbjct: 171 AVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMF 223
Query: 300 AWLGFYIQAAFTGKG 314
+ GF++QA TGKG
Sbjct: 224 SMFGFFVQAIVTGKG 238
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 126/208 (60%), Gaps = 10/208 (4%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP AF EL
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAEL 211
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
KVKEIKNGRLAM + GF++QA TGKG
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 137/242 (56%), Gaps = 19/242 (7%)
Query: 73 VKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDY 132
V+ AN EL R K A + + A + S WYG +R ++LGP +
Sbjct: 18 VETSANPSSQELGGARFTMRKSATTK---------KVASSGSPWYGPDRVKYLGPFSGES 68
Query: 133 PSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFH 192
PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGV-K 127
Query: 193 LVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEAL 252
E VW++ G LDYLG P L A Q ++ I Q +LM E R G
Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWATQVILMGAVEGYRIAG---- 181
Query: 253 EPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTG 312
PLG + D YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TG
Sbjct: 182 GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 238
Query: 313 KG 314
KG
Sbjct: 239 KG 240
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 54 GPDRVKYLGPFSGESPS-YLTGE--FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAML 110
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 111 GALGCVFPELLSRNGVKFGEAVW 133
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 128/211 (60%), Gaps = 10/211 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K + +Q + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 35 KTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 95 LEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA- 152
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I Q +LM E R G PLG D YPGG+ FDPL L+ DP AF
Sbjct: 153 -QSILAIWATQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLADDPEAF 204
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
ELKVKE+KNGRLAM + GF++QA TGKG
Sbjct: 205 AELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 49 GPDRVKYLGPFSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 105
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 106 GALGCVFPELLSRNGVKFGEAVW 128
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 38 KVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 97
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 98 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSI 154
Query: 228 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 287
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 155 LAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 207
Query: 288 VKEIKNGRLAMVAWLGFYIQAAFTGKG 314
VKE+KNGRLAM + GF++QA TGKG
Sbjct: 208 VKELKNGRLAMFSMFGFFVQAIVTGKG 234
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 48 GPDRVKYLGPFSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 104
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 105 GALGCVFPELLSRNGVKFGEAVW 127
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 139/247 (56%), Gaps = 19/247 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N +K + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKFSPSSSEITGNGKATMRKTVTK--------AKPVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D A LS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 179
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 180 G----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232
Query: 308 AAFTGKG 314
A TGKG
Sbjct: 233 AIVTGKG 239
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 128/213 (60%), Gaps = 10/213 (4%)
Query: 102 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 161
K + A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 39 KSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKN 98
Query: 162 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 221
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 99 RELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 157
Query: 222 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 281
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 158 A--QSILAIWATQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 208
Query: 282 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
AF ELKVKE+KNGRLAM + GF++QA TGKG
Sbjct: 209 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 55 GPDRVKYLGPFSGESPS-YLTGE--FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAML 111
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG + G+ A+W
Sbjct: 112 GALGCVFPELLSRNGVKFGEAVW 134
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 124/204 (60%), Gaps = 10/204 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWA
Sbjct: 59 DSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P L +Q ++ I
Sbjct: 119 MLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--QLIHAQSILAIWA 175
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
CQ +LM E R G PLG D YPGG FDPL L+ DP AF ELKVKEIK
Sbjct: 176 CQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDPDAFAELKVKEIK 228
Query: 293 NGRLAMVAWLGFYIQAAFTGKGMI 316
NGRLAM + GF++QA TGKG I
Sbjct: 229 NGRLAMFSMFGFFVQAIVTGKGPI 252
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 64 GPDRVLYLGPFSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG G+ A+W
Sbjct: 121 GALGCVFPELLARNGVKFGEAVW 143
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGMI 316
GRLAM + GF++QA TGKG I
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPI 241
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGMI 316
GRLAM + GF++QA TGKG I
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPI 241
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGMI 316
GRLAM + GF++QA TGKG I
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPI 241
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 125/205 (60%), Gaps = 10/205 (4%)
Query: 112 NESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARW 171
+ S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RW
Sbjct: 54 STSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRW 113
Query: 172 AMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIA 231
AMLGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 114 AMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIW 170
Query: 232 ICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEI 291
CQ +LM E R G PLG D YPGG+ FDPL L++DP AF ELKVKEI
Sbjct: 171 ACQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLAEDPEAFAELKVKEI 223
Query: 292 KNGRLAMVAWLGFYIQAAFTGKGMI 316
KNGRLAM + GF++QA TGKG I
Sbjct: 224 KNGRLAMFSMFGFFVQAIVTGKGPI 248
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 126/205 (61%), Gaps = 10/205 (4%)
Query: 110 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHA 169
A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+
Sbjct: 43 ASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102
Query: 170 RWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIV 229
RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q ++
Sbjct: 103 RWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILA 159
Query: 230 IAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 289
I Q +LM E R G PLG + D YPGGA FDPL L+ DP AF ELKVK
Sbjct: 160 IWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGA-FDPLGLADDPEAFAELKVK 212
Query: 290 EIKNGRLAMVAWLGFYIQAAFTGKG 314
EIKNGRLAM + GF++QA TGKG
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKG 237
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 129/216 (59%), Gaps = 13/216 (6%)
Query: 104 KALARQ---ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQK 160
KA R+ A +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 47 KATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 106
Query: 161 YFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLH 220
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P
Sbjct: 107 NRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--Q 163
Query: 221 LAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDP 280
L +Q ++ I CQ +LM E R G PLG D YPGG FDPL L+ DP
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDP 216
Query: 281 VAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
AF ++KVKEIKNGRLAM + GF++QA TGKG I
Sbjct: 217 DAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 64 GPDRVMYLGPFSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG G+ A+W
Sbjct: 121 GALGCVFPELLARNGVKFGEAVW 143
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 129/213 (60%), Gaps = 10/213 (4%)
Query: 102 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 161
K A + A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 31 KSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 90
Query: 162 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 221
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 91 RELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 149
Query: 222 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 281
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 150 A--QSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 200
Query: 282 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
AF ELKVKEIKNGRLAM + GF++QA TGKG
Sbjct: 201 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 233
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 131/234 (55%), Gaps = 17/234 (7%)
Query: 86 QNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYG 145
Q L K Q + R A ES+WYG +RP++LGP PSYLTGE PGDYG
Sbjct: 21 QQNELVKKVGTAQARITMRRTVRSAP-ESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYG 79
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSK 205
+D A +S DP F K E++H RWAMLGALG + PE+L G E VW++ G
Sbjct: 80 WDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNG-LKFGEAVWFKAGAQI 138
Query: 206 LQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCG---IEALEPLGIFLPGD 262
LDY G P +L +Q ++ I CQ +LM E R G E L+PL
Sbjct: 139 FSEGGLDYAGNP--NLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPL------- 189
Query: 263 INYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
PGGA FDPL L+ DP A ELKVKEIKNGRLAM + GF++QA TGKG I
Sbjct: 190 --LPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 240
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 130/233 (55%), Gaps = 18/233 (7%)
Query: 95 AALQDSSKFKALA-RQARNESL---------WYGEERPRWLGPIP-YDYPSYLTGELPGD 143
AAL S KAL RQ R + + +YG +R ++LGP D P YLTGE PGD
Sbjct: 2 AALIARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGD 61
Query: 144 YGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGY 203
YG+D AGLS DP F +Y E++HARWA+LGALG L PE+L EPVW++ G
Sbjct: 62 YGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGA 121
Query: 204 SKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDI 263
L+YLG L A Q +I Q +LM E R G G D
Sbjct: 122 QIFADGGLNYLGNESLIHA--QSIIATLAVQVVLMGLAEAYRANGGSE----GFLDDLDT 175
Query: 264 NYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGMI 316
YPGG FDPL L+ DP F ELKVKEIKNGRLAM + LGF++QA TGKG +
Sbjct: 176 LYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 122/201 (60%), Gaps = 10/201 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 46 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAM 105
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G L YLG P L A Q ++ I C
Sbjct: 106 LGALGCVFPELLARNGV-KFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA--QSILAIWAC 162
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG+ FDPL L+ D AF ELKVKEIKN
Sbjct: 163 QVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLADDAEAFAELKVKEIKN 215
Query: 294 GRLAMVAWLGFYIQAAFTGKG 314
GRLAM + GF++QA TGKG
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKG 236
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ +Y G + E +L G+ +PG +D LS DP F + + E+ +GR AM+
Sbjct: 50 GPDRVKYLGPFSGESPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAML 106
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG G+ A+W
Sbjct: 107 GALGCVFPELLARNGVKFGEAVW 129
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 126/211 (59%), Gaps = 9/211 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K + + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F +
Sbjct: 37 KTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF
Sbjct: 155 -QSILAIWATQVILMGAVEGYRVAG---EGPLG--EAEDLLYPGGS-FDPLGLATDPEAF 207
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKG 314
ELKVKEIKNGRLAM + GF++QA TGKG
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 238
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 124/201 (61%), Gaps = 10/201 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG FDPL L+ DP AF ++KVKE+KN
Sbjct: 164 QVVLMGAIEGYRVAG----GPLGEVV--DPLYPGGT-FDPLGLADDPEAFADVKVKELKN 216
Query: 294 GRLAMVAWLGFYIQAAFTGKG 314
GRLAM + GF++QA TGKG
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKG 237
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
GP+ Y G + EP +L G+ +PG +D LS DP F + + E+ + R AM+
Sbjct: 51 GPDRVLYLGPLSGEPPS-YLTGE--FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107
Query: 300 AWLGFYIQAAFTGKGMILVAALW 322
LG G+ A+W
Sbjct: 108 GALGCVFPELLARNGVKFGEAVW 130
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 124/201 (61%), Gaps = 10/201 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELKVKE+K
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFGELKVKELKK 216
Query: 294 GRLAMVAWLGFYIQAAFTGKG 314
GRLAM++ GF++QA TGKG
Sbjct: 217 GRLAMLSMFGFFVQAIVTGKG 237
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/250 (45%), Positives = 140/250 (56%), Gaps = 28/250 (11%)
Query: 69 PFTAVKAIANSPLG-ELLQN---RMLETKKAALQDSSKFKALARQARNESLWYGEERPRW 124
P A KA+ +P EL N M +T KA + DS WYG +R ++
Sbjct: 11 PALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDSP--------------WYGPDRVKY 56
Query: 125 LGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEV 184
LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+
Sbjct: 57 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116
Query: 185 LDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECA 244
L G E VW++ G LDYLG P L A Q ++ I Q +LM E
Sbjct: 117 LARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILSIWATQVILMGAVEGY 173
Query: 245 RYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 304
R G PLG + D YPGG+ FDPL L++DP ELKVKE+KNGRLAM + GF
Sbjct: 174 RVAG----GPLGEIV--DPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGF 226
Query: 305 YIQAAFTGKG 314
++QA TGKG
Sbjct: 227 FVQAIVTGKG 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,202,939
Number of Sequences: 539616
Number of extensions: 5522470
Number of successful extensions: 12262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 11816
Number of HSP's gapped (non-prelim): 209
length of query: 324
length of database: 191,569,459
effective HSP length: 118
effective length of query: 206
effective length of database: 127,894,771
effective search space: 26346322826
effective search space used: 26346322826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)