Query 020605
Match_columns 324
No_of_seqs 215 out of 1589
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ysj_A Protein YXEP; M20 famil 100.0 1.2E-48 4E-53 367.5 31.5 270 54-323 31-302 (404)
2 1xmb_A IAA-amino acid hydrolas 100.0 3.8E-49 1.3E-53 372.4 27.3 281 41-323 14-294 (418)
3 3io1_A Aminobenzoyl-glutamate 100.0 9.3E-48 3.2E-52 365.5 28.5 275 43-323 4-326 (445)
4 3pfo_A Putative acetylornithin 100.0 1.2E-44 4.1E-49 343.2 29.1 272 40-323 13-324 (433)
5 1cg2_A Carboxypeptidase G2; me 100.0 3.5E-43 1.2E-47 329.1 24.3 266 41-319 7-286 (393)
6 3ram_A HMRA protein; two-domai 100.0 5.6E-43 1.9E-47 327.6 24.9 257 41-323 4-267 (394)
7 1vgy_A Succinyl-diaminopimelat 100.0 2.7E-42 9.1E-47 323.1 27.6 261 55-319 6-281 (393)
8 3ct9_A Acetylornithine deacety 100.0 9E-43 3.1E-47 322.2 23.8 249 55-318 11-269 (356)
9 3isz_A Succinyl-diaminopimelat 100.0 1.2E-41 4.2E-46 316.6 29.1 262 54-319 2-278 (377)
10 3tx8_A Succinyl-diaminopimelat 100.0 2.9E-42 1E-46 320.2 23.7 254 55-320 13-277 (369)
11 3dlj_A Beta-Ala-His dipeptidas 100.0 3.5E-41 1.2E-45 323.7 31.0 276 40-323 12-378 (485)
12 3rza_A Tripeptidase; phosphory 100.0 1.2E-40 4.1E-45 312.2 28.0 263 43-323 14-295 (396)
13 2f7v_A Aectylcitrulline deacet 100.0 1.5E-40 5.2E-45 308.7 22.7 243 55-319 9-271 (369)
14 2rb7_A Peptidase, M20/M25/M40 100.0 1.3E-40 4.4E-45 308.6 21.6 246 55-318 6-271 (364)
15 2pok_A Peptidase, M20/M25/M40 100.0 3.3E-40 1.1E-44 316.7 25.2 276 41-321 31-380 (481)
16 2zog_A Cytosolic non-specific 100.0 9.7E-40 3.3E-44 313.3 27.9 274 42-323 9-371 (479)
17 3gb0_A Peptidase T; NP_980509. 100.0 1.8E-39 6.3E-44 301.8 28.0 252 55-323 6-275 (373)
18 3pfe_A Succinyl-diaminopimelat 100.0 2.1E-39 7.2E-44 310.2 25.9 275 41-320 5-362 (472)
19 3ife_A Peptidase T; metallopep 100.0 2.6E-38 8.8E-43 299.8 24.6 251 55-323 27-331 (434)
20 3khx_A Putative dipeptidase sa 100.0 2.2E-37 7.4E-42 297.5 25.1 266 42-319 23-393 (492)
21 1fno_A Peptidase T; metallo pe 100.0 2.5E-37 8.4E-42 291.6 25.0 252 55-323 2-304 (417)
22 3mru_A Aminoacyl-histidine dip 100.0 7.1E-36 2.4E-40 286.7 25.2 249 55-320 14-294 (490)
23 1z2l_A Allantoate amidohydrola 100.0 9.4E-36 3.2E-40 281.3 24.5 244 55-322 9-313 (423)
24 3n5f_A L-carbamoylase, N-carba 100.0 1.2E-34 4E-39 272.6 29.2 243 55-322 5-309 (408)
25 2v8h_A Beta-alanine synthase; 100.0 1.9E-35 6.3E-40 283.0 22.8 245 55-322 32-344 (474)
26 1lfw_A PEPV; hydrolase, dipept 100.0 1.3E-34 4.3E-39 277.1 28.0 265 44-318 5-369 (470)
27 2qyv_A XAA-His dipeptidase; YP 100.0 2.5E-34 8.5E-39 276.2 27.7 245 55-317 11-330 (487)
28 1q7l_A Aminoacylase-1; catalys 99.9 1.7E-27 5.7E-32 202.0 14.6 170 55-228 10-197 (198)
29 4h2k_A Succinyl-diaminopimelat 99.9 4.3E-26 1.5E-30 202.4 17.6 152 54-206 5-169 (269)
30 3t68_A Succinyl-diaminopimelat 99.9 3.5E-26 1.2E-30 202.9 14.5 151 55-206 6-169 (268)
31 2fvg_A Endoglucanase; TM1049, 99.8 7.5E-21 2.6E-25 174.2 8.8 161 60-249 3-245 (340)
32 2gre_A Deblocking aminopeptida 99.8 2.6E-19 8.9E-24 164.5 13.1 146 55-206 6-244 (349)
33 1vhe_A Aminopeptidase/glucanas 99.8 6.5E-18 2.2E-22 156.5 16.0 145 55-205 7-241 (373)
34 1tkj_A Aminopeptidase, SGAP; d 99.8 3.2E-18 1.1E-22 152.7 11.3 136 55-204 7-161 (284)
35 2wyr_A Cobalt-activated peptid 99.8 7.1E-18 2.4E-22 153.8 13.4 142 57-206 4-231 (332)
36 1rtq_A Bacterial leucyl aminop 99.7 4.9E-17 1.7E-21 146.1 13.6 141 55-204 20-180 (299)
37 3tc8_A Leucine aminopeptidase; 99.7 8E-16 2.7E-20 138.4 17.5 144 55-204 25-201 (309)
38 1y0y_A FRV operon protein FRVX 99.7 2.3E-16 7.9E-21 145.0 13.4 141 57-206 8-238 (353)
39 3gux_A Putative Zn-dependent e 99.6 2.8E-15 9.5E-20 135.0 16.0 144 55-204 27-204 (314)
40 1ylo_A Hypothetical protein SF 99.6 4.6E-15 1.6E-19 136.0 16.2 142 59-206 7-227 (348)
41 1vho_A Endoglucanase; structur 99.6 8.7E-15 3E-19 134.1 15.4 146 55-206 5-230 (346)
42 2wzn_A TET3, 354AA long hypoth 99.6 1.6E-18 5.5E-23 156.9 -9.6 186 58-259 12-201 (354)
43 2afw_A Glutaminyl-peptide cycl 99.6 1.1E-14 3.6E-19 132.5 13.9 126 55-190 31-190 (329)
44 3cpx_A Aminopeptidase, M42 fam 99.6 2.3E-15 7.8E-20 136.5 7.7 143 49-205 13-220 (321)
45 3kl9_A PEPA, glutamyl aminopep 99.4 2.9E-12 1E-16 117.2 16.4 146 55-206 3-240 (355)
46 4fuu_A Leucine aminopeptidase; 99.4 7.3E-12 2.5E-16 112.8 17.8 145 55-203 25-201 (309)
47 4fai_A CG5976, isoform B; alph 99.4 4.7E-12 1.6E-16 115.0 16.1 138 55-204 38-205 (330)
48 3pb6_X Glutaminyl-peptide cycl 99.4 2.3E-12 7.9E-17 116.5 12.1 140 55-203 39-217 (330)
49 4f9u_A CG32412; alpha/beta hyd 99.4 6.1E-12 2.1E-16 113.5 14.6 125 55-190 11-163 (312)
50 2vpu_A TET3, 354AA long hypoth 99.3 1.4E-11 4.7E-16 112.6 12.9 67 56-124 10-77 (354)
51 3isx_A Endoglucanase; TM1050, 99.2 1.3E-10 4.5E-15 105.5 12.1 140 56-205 12-234 (343)
52 2ek8_A Aminopeptidase; metallo 98.8 2.4E-08 8.3E-13 93.6 11.6 120 65-204 162-302 (421)
53 3iib_A Peptidase M28; YP_92679 98.7 5.8E-08 2E-12 91.5 11.1 102 75-191 203-317 (444)
54 3kas_A Transferrin receptor pr 98.3 1.4E-06 4.7E-11 85.2 9.5 90 98-203 266-365 (640)
55 3fed_A Glutamate carboxypeptid 98.3 1.7E-06 5.9E-11 85.4 8.9 90 98-203 312-410 (707)
56 3k9t_A Putative peptidase; str 94.5 0.28 9.6E-06 45.0 10.7 85 98-204 165-253 (435)
57 2hc9_A Leucine aminopeptidase 89.6 7.1 0.00024 36.5 13.6 120 55-179 167-307 (491)
58 2ijz_A Probable M18-family ami 87.6 0.16 5.5E-06 47.1 1.2 61 62-122 6-85 (428)
59 1y7e_A Probable M18-family ami 87.5 0.36 1.2E-05 45.1 3.5 51 71-122 32-99 (458)
60 2glf_A Probable M18-family ami 86.5 1.2 4.2E-05 41.4 6.5 51 71-121 30-95 (450)
61 3kzw_A Cytosol aminopeptidase; 86.1 2 6.8E-05 40.3 7.6 117 55-179 197-338 (515)
62 3ij3_A Cytosol aminopeptidase; 85.9 1.3 4.3E-05 41.3 6.1 117 55-179 167-305 (482)
63 4efd_A Aminopeptidase; structu 85.6 9.3 0.00032 35.8 11.8 118 55-179 204-345 (522)
64 1lam_A Leucine aminopeptidase; 84.6 2.8 9.6E-05 39.2 7.9 118 55-179 161-305 (484)
65 1gyt_A Cytosol aminopeptidase; 82.2 3.1 0.00011 39.1 7.3 119 54-179 180-325 (503)
66 3kr4_A M17 leucyl aminopeptida 82.0 19 0.00064 33.9 12.3 114 55-179 205-349 (528)
67 3h8g_F Cytosol aminopeptidase; 81.8 3.9 0.00013 38.3 7.7 121 54-179 179-322 (497)
68 3jru_B Probable cytosol aminop 80.0 5.1 0.00018 37.4 7.8 118 55-179 176-317 (490)
69 3pei_A Cytosol aminopeptidase; 79.6 4.1 0.00014 38.0 7.0 118 55-179 164-306 (486)
70 2glj_A Probable M18-family ami 75.7 0.57 2E-05 43.8 0.1 48 74-122 37-105 (461)
71 3mru_A Aminoacyl-histidine dip 72.3 6.9 0.00024 36.6 6.7 43 271-319 347-389 (490)
72 3fed_A Glutamate carboxypeptid 54.7 14 0.00048 36.3 5.2 51 40-94 14-67 (707)
73 2ek8_A Aminopeptidase; metallo 47.8 26 0.0009 31.9 5.7 40 55-94 16-57 (421)
74 3iib_A Peptidase M28; YP_92679 47.8 28 0.00097 32.0 5.9 39 56-94 22-65 (444)
75 2ijz_A Probable M18-family ami 46.8 7.5 0.00026 35.8 1.8 45 137-186 226-273 (428)
76 2jvf_A De novo protein M7; tet 45.7 24 0.00083 23.3 3.6 32 290-321 15-46 (96)
77 1y7e_A Probable M18-family ami 43.5 7.3 0.00025 36.2 1.2 42 137-181 246-289 (458)
78 2glj_A Probable M18-family ami 42.4 17 0.00057 33.9 3.4 40 138-181 253-294 (461)
79 3kas_A Transferrin receptor pr 29.9 28 0.00095 33.8 2.8 48 40-91 7-59 (640)
80 2glf_A Probable M18-family ami 28.4 46 0.0016 30.8 3.9 39 138-181 241-281 (450)
81 2qyv_A XAA-His dipeptidase; YP 24.6 1.8E+02 0.0062 26.6 7.4 45 269-319 343-387 (487)
82 4eme_A M18 aspartyl aminopepti 20.1 2.1E+02 0.007 27.3 6.6 51 71-121 20-90 (571)
No 1
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.2e-48 Score=367.52 Aligned_cols=270 Identities=39% Similarity=0.649 Sum_probs=226.7
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC-CCceEEEEeCCC-CCCEEEEEEecccCCCCCCCCCc
Q 020605 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-AKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWE 131 (324)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~~ 131 (324)
.+++++++++|+++||+|++|.++++|+.++|+++|++++.+. +++|++++++++ ++|+|+|+|||||||.++++.+|
T Consensus 31 ~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~P 110 (404)
T 1ysj_A 31 HTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLP 110 (404)
T ss_dssp HHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCC
Confidence 3889999999999999999999999999999999999986543 467999999654 46999999999999998888889
Q ss_pred cccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCcccHHHHHHccCcCCcceEEEeccCCCCCCc
Q 020605 132 HKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTG 211 (324)
Q Consensus 132 ~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 211 (324)
|....||++||||+|++++++|++++.|++.+..++++|.|+|++|||.+.|++.+++++.++++|+++.+|.+|+.+.|
T Consensus 111 f~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g 190 (404)
T 1ysj_A 111 FASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVG 190 (404)
T ss_dssp TCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTT
T ss_pred cccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCc
Confidence 98888999999999999999999999999887778999999999999987799999998877778999998777766667
Q ss_pred eEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcCCCCcccCCe
Q 020605 212 TVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEI 291 (324)
Q Consensus 212 ~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~ 291 (324)
.+....|...+|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+..++...+++|++.|+||.+.|+||++
T Consensus 191 ~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~ 270 (404)
T 1ysj_A 191 TIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQ 270 (404)
T ss_dssp EEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSE
T ss_pred eEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCc
Confidence 76666665567899999999999999999999999999999999999876544444455689999999999999999999
Q ss_pred EEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 292 VRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 292 a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
|++++|+|+++.++.+++.++|++++++.+..
T Consensus 271 a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~ 302 (404)
T 1ysj_A 271 AEMEGTVRTFQKEARQAVPEHMRRVAEGIAAG 302 (404)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887643
No 2
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=3.8e-49 Score=372.36 Aligned_cols=281 Identities=56% Similarity=0.953 Sum_probs=227.7
Q ss_pred HHHHHHhccCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecc
Q 020605 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~D 120 (324)
.+++.++++..+.++++++++++|+++||+|++|.++++|+.++|+++|++++.+..++|+++++++++.|+|+|+||||
T Consensus 14 ~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~D 93 (418)
T 1xmb_A 14 QTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMD 93 (418)
T ss_dssp --CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECC
T ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEeccc
Confidence 33455666553112789999999999999999999999999999999999998765578999999754228999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCcccHHHHHHccCcCCcceEE
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMF 200 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i 200 (324)
|||.++++.|||...+||++||||+|++++++|+|++.|++.+..++++|.|+|++|||++.|++.+++++.++++|+++
T Consensus 94 ~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~i 173 (418)
T 1xmb_A 94 ALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF 173 (418)
T ss_dssp CBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEE
T ss_pred ccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEEE
Confidence 99999888999998889999999999999999999999999887789999999999999667999999988776689999
Q ss_pred EeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEE
Q 020605 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID 280 (324)
Q Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~ 280 (324)
.+|.+++.|+|.+....+..++|..+++|+++|+++|+|.|+.|.||+..+++++..|+.+..+..++...++++++.|+
T Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i~ 253 (418)
T 1xmb_A 174 GIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN 253 (418)
T ss_dssp EEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEEC
T ss_pred EEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEE
Confidence 98876667777765566667789999999999999999999999999999999999998875444344456799999999
Q ss_pred cCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 281 gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
||.+.|+||++|++++|+|+++ +.+++.++|++++++.+..
T Consensus 254 gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~ 294 (418)
T 1xmb_A 254 GGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAV 294 (418)
T ss_dssp --------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHH
T ss_pred ecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 8999999999999887643
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=9.3e-48 Score=365.47 Aligned_cols=275 Identities=35% Similarity=0.490 Sum_probs=226.7
Q ss_pred HHHHhccCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC--------------------------
Q 020605 43 ELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-------------------------- 96 (324)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------- 96 (324)
++.+++++.+ +++++++++|+++|+++++|.++++||.++|+++|++++...
T Consensus 4 ~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (445)
T 3io1_A 4 QLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE 81 (445)
T ss_dssp CHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence 3566777776 999999999999999999999999999999999999987642
Q ss_pred -------------CCceEEEEeCCC-CCCEEEEEEecccCCCCCCCCCc---c----ccccCCceeeccchHHHHHHHHH
Q 020605 97 -------------AKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWE---H----KSKNNGKMHGCGHDVHTTILLGA 155 (324)
Q Consensus 97 -------------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~~---~----~~~~~g~~~grG~kg~~a~~l~a 155 (324)
+++|++|+++++ ++|+|+|+|||||||+++.+.|+ | ....+|++||||+|++++++|++
T Consensus 82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a 161 (445)
T 3io1_A 82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL 161 (445)
T ss_dssp TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence 568999999765 57999999999999998877884 3 34568999999999999999999
Q ss_pred HHHHHhcCCCCCceEEEEEeccCCCcccHHHHHHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecC
Q 020605 156 ARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKG 235 (324)
Q Consensus 156 ~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~ 235 (324)
++.|++.+..++++|.|+|++|||++.|++.++++|.++++|++++.|++++.|.|.+....+.. .+..+++|+++|++
T Consensus 162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~-~a~~~~~i~v~Gk~ 240 (445)
T 3io1_A 162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNF-MATTKFDVQFSGVA 240 (445)
T ss_dssp HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCB-CEEEEEEEEEECCC
T ss_pred HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCe-eEEEEEEEEEEeec
Confidence 99999887789999999999999988899999999988889999999987666677765543221 13479999999999
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHH
Q 020605 236 GHA-AMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIK 314 (324)
Q Consensus 236 ~Hs-~~p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~ 314 (324)
+|+ +.|+.|+||+..+++++..|+.+. +.. .+..+++++.|+||.+.|+||++|++++|+|+.+.++.+++.++|+
T Consensus 241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~--~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~ 317 (445)
T 3io1_A 241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHS--AGASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQ 317 (445)
T ss_dssp SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBT--TBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhc--CCCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 998 589999999999999999998873 221 2357899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 020605 315 EVKLFEVAY 323 (324)
Q Consensus 315 ~~i~~~a~~ 323 (324)
++++..++.
T Consensus 318 ~~~~~~a~~ 326 (445)
T 3io1_A 318 HVVAGAAAM 326 (445)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-44 Score=343.17 Aligned_cols=272 Identities=16% Similarity=0.134 Sum_probs=232.6
Q ss_pred hHHHHHHhccCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec---------------------CCC
Q 020605 40 LTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP---------------------VAK 98 (324)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---------------------~~~ 98 (324)
..+++.++++..+ +++++++++|+++||+|++|.++++|+.++|+++|++++.. .++
T Consensus 13 ~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (433)
T 3pfo_A 13 ITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGS 90 (433)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGC
T ss_pred HHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCC
Confidence 4677888888877 99999999999999999999999999999999999998642 356
Q ss_pred ceEEEEeCCC-CCCEEEEEEecccCCCCCCCCC---cccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceE
Q 020605 99 TGIVASVGSG-GEPWFGLRAEMDALPLQEMVEW---EHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTV 170 (324)
Q Consensus 99 ~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~---~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i 170 (324)
+|++++++++ ++|+|+|+|||||||.++...| ||.. .++|++||||+ |++++++|++++.|++.+.+++++|
T Consensus 91 ~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 91 MQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred cEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 8999999754 5689999999999998766556 6765 56899999994 8999999999999998877789999
Q ss_pred EEEEeccCCC-cccHHHHHHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHH
Q 020605 171 KLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVL 249 (324)
Q Consensus 171 ~~~~~~dEE~-~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~ 249 (324)
.|+|++|||. +.|++.+++.+. ++|++++.+++. + .+. ..++|..+++|+++|+++|+|.|+.|.||+.
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~ep~~--~--~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~ 240 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRGY--RADACLIPEPTG--H--TLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSAIL 240 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTTC--CCSEEEECCCCS--S--CEE----EEECEEEEEEEEEECCCCBGGGGGGSCCHHH
T ss_pred EEEEEecCccCChhHHHHHhcCC--CCCEEEEeCCCC--C--ceE----EecceEEEEEEEEEcCCCccCCCCcCcCHHH
Confidence 9999999995 579999998875 689999866422 1 222 2347999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccc-----CCC-----CCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 250 AASFAILTLQHIVSRE-----TDP-----LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 250 ~l~~~l~~l~~~~~~~-----~~~-----~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
.+++++..|+.+..+. .++ ..+.++|++.|+||.+.|+||++|++.+++|++|.++.+++.+.|++++++
T Consensus 241 ~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 320 (433)
T 3pfo_A 241 SAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLAD 320 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 9999999998775321 122 235689999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 020605 320 EVAY 323 (324)
Q Consensus 320 ~a~~ 323 (324)
.+++
T Consensus 321 ~~~~ 324 (433)
T 3pfo_A 321 AQAT 324 (433)
T ss_dssp HHTT
T ss_pred Hhhh
Confidence 7653
No 5
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.5e-43 Score=329.08 Aligned_cols=266 Identities=19% Similarity=0.205 Sum_probs=225.2
Q ss_pred HHHHHHhccCcchHHHHHHHHHHhccCCCCCcch---HHHHHHHHHHHhhCCCceEecC-----CCceEEEEeCCCCCCE
Q 020605 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEE---YETSQLVRSELDSLGIEYTWPV-----AKTGIVASVGSGGEPW 112 (324)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~~~~ 112 (324)
.+++.++++.+. +++++++++|++|||+|++| .++++||.++|+++|++++.+. .++|++++++++.+|+
T Consensus 7 ~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~ 84 (393)
T 1cg2_A 7 DNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKN 84 (393)
T ss_dssp CHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCC
T ss_pred hhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCce
Confidence 556777887766 99999999999999999876 6889999999999999987643 3579999997544589
Q ss_pred EEEEEecccCCC-CCCCCCccccccCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHH
Q 020605 113 FGLRAEMDALPL-QEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYM 187 (324)
Q Consensus 113 i~l~~H~DtVp~-~~~~~~~~~~~~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~ 187 (324)
|+|+|||||||+ +++..|||. .+||++|||| +|++++++|++++.|++.+.+++++|.|+|+++||.+ .|++.+
T Consensus 85 i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~ 163 (393)
T 1cg2_A 85 LLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDL 163 (393)
T ss_dssp EEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHH
T ss_pred EEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHH
Confidence 999999999987 445678998 5689999999 3799999999999999988777789999999999954 699999
Q ss_pred HHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccC
Q 020605 188 IKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRET 266 (324)
Q Consensus 188 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~l~~~l~~l~~~~~~~~ 266 (324)
++.+. .++|+++++|++.. +.+.+.. .++|..+++|+++|+++|+| .|+.|.||+..+++++..|+.+..+
T Consensus 164 ~~~~~-~~~d~~i~~e~~~~-~~~~i~~----~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~~-- 235 (393)
T 1cg2_A 164 IQEEA-KLADYVLSFEPTSA-GDEKLSL----GTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDK-- 235 (393)
T ss_dssp HHHHH-HHCSEEEECCCEET-TSCEEES----EECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCBT--
T ss_pred HHHHh-hcCCEEEEeCCCCC-CCCcEEE----eeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhCc--
Confidence 88643 35899998775320 2333322 23689999999999999997 7999999999999999999876432
Q ss_pred CCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 267 DPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 267 ~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
....+++++.|+||.+.|+||++|++++|+|+++.++.+++.++|++++++
T Consensus 236 --~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 236 --AKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ 286 (393)
T ss_dssp --TTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred --ccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc
Confidence 346799999999999999999999999999999999999999999998864
No 6
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=5.6e-43 Score=327.64 Aligned_cols=257 Identities=27% Similarity=0.331 Sum_probs=225.2
Q ss_pred HHHHHHhccCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCC--CceEEEEeCCC-CCCEEEEEE
Q 020605 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVA--KTGIVASVGSG-GEPWFGLRA 117 (324)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvia~~~~~-~~~~i~l~~ 117 (324)
.+++.+++++.+ +++++++++|+++||+|++|.++++||.++|+++|++++.+.. ++|++|+++++ ++|+|+|.|
T Consensus 4 ~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 456777788777 9999999999999999999999999999999999999887544 57999999765 579999999
Q ss_pred ecccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc--ccHH-HHHHccCcC
Q 020605 118 EMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAY-YMIKEGAVD 194 (324)
Q Consensus 118 H~DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~-~~~~~~~~~ 194 (324)
|||||| |++|+||+|+..+++|++++.|++.+..++++|.|+|++|||++ .|++ .+++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999998 67899999998899999999998876678999999999999964 6999 999999888
Q ss_pred CcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCce
Q 020605 195 KFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARV 273 (324)
Q Consensus 195 ~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~ 273 (324)
++|++++.|++++. ..+...+|..+++|+++|+++|+| .|+.|+||+..+++++..|+.+..... ..++
T Consensus 148 ~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~~---~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIK---KDQR 217 (394)
T ss_dssp GCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGSC---TTCE
T ss_pred cCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhCC---CCCe
Confidence 89999999876532 223445799999999999999999 899999999999999999988753321 2356
Q ss_pred EEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 274 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 274 ~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
++++.++||.+.|+||++|++++++|..+.++.+++.+.|+++++..+.+
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~ 267 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQ 267 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999999999999999988753
No 7
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.7e-42 Score=323.14 Aligned_cols=261 Identities=19% Similarity=0.245 Sum_probs=218.1
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec--CCCceEEEEeCCCCCCEEEEEEecccCCCCCCCCC--
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW-- 130 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~-- 130 (324)
+++++++++|+++||+|++|.++++||.++|+++|++++.. +..+|++++++ .++|+|+|+|||||||.++...|
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRG-TKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEEC-CCCCEEEEEcccCCcCCCCcccCCC
Confidence 78999999999999999999999999999999999998763 34679999994 34589999999999999775566
Q ss_pred -cccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc--ccHHHHHHccCc--CCcceEEE
Q 020605 131 -EHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAV--DKFQGMFG 201 (324)
Q Consensus 131 -~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~~~~~~~~~--~~~d~~i~ 201 (324)
||.. ..||++||||+ |++++++|.+++.+++.+.+++++|.|+|++|||.+ .|++.+++.+.. ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 6765 46999999994 789999999999999877778999999999999964 688888765322 24788887
Q ss_pred eccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-CCCCCceEEEEEEE
Q 020605 202 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-DPLEARVVTVGFID 280 (324)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~-~~~~~~~~~v~~i~ 280 (324)
.+++...+.+.. .. ...+|..+++|+++|+++|+|.|+.|.||+..+++++.+|+....+.. ....+.+++++.|+
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 765443333332 11 234799999999999999999999999999999999999987643221 23456799999999
Q ss_pred cCC-CCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 281 AGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 281 gg~-~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
||. +.|+||++|++++|+|+++.++.+++.++|+++++.
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~ 281 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK 281 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 997 899999999999999999999999999999998875
No 8
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=9e-43 Score=322.17 Aligned_cols=249 Identities=16% Similarity=0.114 Sum_probs=210.8
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCC-C-CCCEEEEEEecccCCCCC-CCCCc
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGS-G-GEPWFGLRAEMDALPLQE-MVEWE 131 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~-~~~~i~l~~H~DtVp~~~-~~~~~ 131 (324)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+ .+|+++++++ + ++|+|+|.|||||||.++ |+..|
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p 88 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDP 88 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCC
Confidence 78999999999999999999999999999999999998876 7799999965 3 468999999999999875 34447
Q ss_pred cccc-cCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCC-c-ccHHHHHHccCcCCcceEEEeccC
Q 020605 132 HKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGMFGIHIS 205 (324)
Q Consensus 132 ~~~~-~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~~~~~~~~~~~d~~i~~~~~ 205 (324)
|... +||++||||+ |++++++|++++.|++.+ ++++|.|+|+++||. + .|++.+++.+ .++|+++..+++
T Consensus 89 ~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~ep~ 164 (356)
T 3ct9_A 89 FTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVGEPT 164 (356)
T ss_dssp CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEECCSB
T ss_pred CccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEcCCC
Confidence 7754 4899999995 689999999999999876 789999999999996 5 6999999886 368888876643
Q ss_pred CCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-CCCceEEEEEEEcCCC
Q 020605 206 PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDP-LEARVVTVGFIDAGQA 284 (324)
Q Consensus 206 ~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~~~-~~~~~~~v~~i~gg~~ 284 (324)
. +.+. ..++|..+++|+++|+++|+|.| .|.||+..+++++.+|+.+..+..++ .+.++++++.|+||.+
T Consensus 165 ~----~~i~----~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG~~ 235 (356)
T 3ct9_A 165 E----MQPA----IAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAGTQ 235 (356)
T ss_dssp T----TCCE----EEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEECSS
T ss_pred C----ceEE----EeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecCCc
Confidence 2 2221 12368899999999999999999 99999999999999998875443333 3567999999999999
Q ss_pred CcccCCeEEEEEEEecCChhhHHHHHHHHHHHHH
Q 020605 285 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKL 318 (324)
Q Consensus 285 ~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~ 318 (324)
.|+||++|++++|+|+++.++.+++.++|+++++
T Consensus 236 ~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~ 269 (356)
T 3ct9_A 236 HNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIA 269 (356)
T ss_dssp TTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCC
T ss_pred CCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999988764
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=1.2e-41 Score=316.56 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=211.7
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec--CCCceEEEEeCCCCCCEEEEEEecccCCCCCCCCC-
Q 020605 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW- 130 (324)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~- 130 (324)
.+++++++++|+++||+|++|.++++||.++|+++|++++.. +...|++++++ .++|+|+|.|||||||.++.+.|
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCC
Confidence 478999999999999999999999999999999999998852 34678999984 34699999999999999765556
Q ss_pred --ccccc-cCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc--ccHHHHHHccCc--CCcceEE
Q 020605 131 --EHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAV--DKFQGMF 200 (324)
Q Consensus 131 --~~~~~-~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~~~~~~~~~--~~~d~~i 200 (324)
||... +||++||||+ |+++++++.+++.+++.+..++++|.|+|+++||.+ .|++.+++.... ..+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 67665 5999999995 689999999999998887778999999999999965 499888764321 2578888
Q ss_pred EeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCceEEEEEE
Q 020605 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDPLEARVVTVGFI 279 (324)
Q Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~-~~~~~~~~~~v~~i 279 (324)
+.++....+.+... .. ..+|..+++++++|+++|+|.|+.|.||+..+++++.+|+....+. ......++++++.+
T Consensus 161 ~~e~~~~~~~g~~i-~~--g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDVV-KN--GRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSEE-EE--EECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCceE-EE--EcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 87764433333321 11 2368899999999999999999999999999999999998764332 12245689999999
Q ss_pred EcCC-CCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 280 DAGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 280 ~gg~-~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
+||. +.|+||++|++.+|+|+++.++.+++.+.+++++++
T Consensus 238 ~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~ 278 (377)
T 3isz_A 238 HAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK 278 (377)
T ss_dssp EECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999998875
No 10
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.9e-42 Score=320.21 Aligned_cols=254 Identities=17% Similarity=0.173 Sum_probs=212.8
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCc-eEecCCCceEEEEeCCCCCCEEEEEEecccCCCCCCCCCccc
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHK 133 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~~~~ 133 (324)
+++++++++|+++||+|++|.++++|+.++|+++|++ ++.+..++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 7889999999999999999999999999999999884 55444567899999766679999999999999875 45554
Q ss_pred cccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc---ccHHHHHHccC-cCCcceEEEeccCC
Q 020605 134 SKNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---GGAYYMIKEGA-VDKFQGMFGIHISP 206 (324)
Q Consensus 134 ~~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~---~G~~~~~~~~~-~~~~d~~i~~~~~~ 206 (324)
. ++|++||||+ |++++++|+|++.|++. ..++++|.|+|+++||.+ .|++.+++.+. ..++|+++..+++.
T Consensus 91 ~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~~ 168 (369)
T 3tx8_A 91 V-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPTG 168 (369)
T ss_dssp E-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCCCT
T ss_pred E-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeCCCC
Confidence 3 4899999995 59999999999999874 468999999999999965 59999998752 12578888765432
Q ss_pred CCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--CC-CCceEEEEEEEcCC
Q 020605 207 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD--PL-EARVVTVGFIDAGQ 283 (324)
Q Consensus 207 ~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~~--~~-~~~~~~v~~i~gg~ 283 (324)
+.+. ..++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+... +. ...+++++.|+||.
T Consensus 169 ----~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 169 ----GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp ----TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred ----Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 2322 2347999999999999999999999999999999999999987543211 11 14689999999999
Q ss_pred CCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 020605 284 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFE 320 (324)
Q Consensus 284 ~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~ 320 (324)
+.|+||++|++++|+|++|.++.+++.+.|++++++.
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 277 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELD 277 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTT
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988764
No 11
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=323.72 Aligned_cols=276 Identities=12% Similarity=0.063 Sum_probs=221.0
Q ss_pred hHHHHHHhccCcchHHHHHHHHHHhccCCCC--Ccc------hHHHHHHHHHHHhhCCCceEecC--------C-----C
Q 020605 40 LTRELLDSAREPEFFEWMRRIRRRIHENPEL--GFE------EYETSQLVRSELDSLGIEYTWPV--------A-----K 98 (324)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~-----~ 98 (324)
..+++.++++.++ +++++++++|++|||+ |++ |.++++||.++|+++|++++... + .
T Consensus 12 ~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~ 89 (485)
T 3dlj_A 12 LLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIP 89 (485)
T ss_dssp THHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECC
T ss_pred HHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCC
Confidence 3778889998877 9999999999999999 887 57899999999999999987643 2 3
Q ss_pred ceEEEEeCCC-CCCEEEEEEecccCCCCCCCCC---ccccc-cCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceE
Q 020605 99 TGIVASVGSG-GEPWFGLRAEMDALPLQEMVEW---EHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTV 170 (324)
Q Consensus 99 ~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~---~~~~~-~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i 170 (324)
+|++++++++ ++|+|+|+|||||||+++.+.| ||... ++|++||||+ |++++++|+|+++|++.+.+++++|
T Consensus 90 ~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 169 (485)
T 3dlj_A 90 PVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNI 169 (485)
T ss_dssp CEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred cEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccE
Confidence 5899999764 4699999999999999765455 77754 6999999994 6999999999999999887889999
Q ss_pred EEEEeccCCC-cccHHHHHHccC---cCCcceEEEeccCCCC-CCceEEeecccccceeeEEEEEEEecCC--CCCCCCC
Q 020605 171 KLVFQPGEEG-YGGAYYMIKEGA---VDKFQGMFGIHISPVL-PTGTVGSRPGPLLAGSGRFTAVIKGKGG--HAAMPQD 243 (324)
Q Consensus 171 ~~~~~~dEE~-~~G~~~~~~~~~---~~~~d~~i~~~~~~~~-~~~~~~~~~g~~~~G~~~~~i~~~G~~~--Hs~~p~~ 243 (324)
.|+|+++||. +.|++.+++++. ++++|++++.|+.... ....+. . .++|..+++|+++|+++ |+|. .
T Consensus 170 ~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~--g~~g~~~~~i~v~G~~~~~H~~~--~ 243 (485)
T 3dlj_A 170 KFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT--Y--GTRGNSYFMVEVKCRDQDFHSGT--F 243 (485)
T ss_dssp EEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEE--E--EECEEEEEEEEEESCSSCEETTT--S
T ss_pred EEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEE--E--eccceEEEEEEEEECCCCCcCCC--C
Confidence 9999999995 469999998763 4578999998853211 112221 1 24799999999999999 9997 3
Q ss_pred CCCHHHHHHHHHHHHHHhhccc-----------CCC-------------C---------------------------CCc
Q 020605 244 TRDPVLAASFAILTLQHIVSRE-----------TDP-------------L---------------------------EAR 272 (324)
Q Consensus 244 g~nAi~~l~~~l~~l~~~~~~~-----------~~~-------------~---------------------------~~~ 272 (324)
|.||+..++.++..|..+..+. ..| . ..+
T Consensus 244 g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 323 (485)
T 3dlj_A 244 GGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYP 323 (485)
T ss_dssp TTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSC
T ss_pred CccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCC
Confidence 4455544455444444432221 111 1 157
Q ss_pred eEEEEEEEcC----CCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 273 VVTVGFIDAG----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 273 ~~~v~~i~gg----~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
+++++.|+|| .+.|+||++|++++++|+.+.++.+++.+.|+++++..+.+
T Consensus 324 ~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~ 378 (485)
T 3dlj_A 324 SLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSK 378 (485)
T ss_dssp EEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccc
Confidence 8999999999 89999999999999999999999999999999999998764
No 12
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-40 Score=312.19 Aligned_cols=263 Identities=19% Similarity=0.169 Sum_probs=216.9
Q ss_pred HHHHhccCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC-------CCceEEEEeCCC----CCC
Q 020605 43 ELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-------AKTGIVASVGSG----GEP 111 (324)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~----~~~ 111 (324)
....+++.++ +++++++++|+++||+|++|.++++||.++|+++|++++.+. ..+|++++++++ ++|
T Consensus 14 ~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~ 91 (396)
T 3rza_A 14 NLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVP 91 (396)
T ss_dssp -----CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CC
T ss_pred ceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCC
Confidence 3456677777 999999999999999999999999999999999999998754 257999999764 469
Q ss_pred EEEEEEecccCCCCCCCCCccccccCCceeeccc-------hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-cc
Q 020605 112 WFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGH-------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GG 183 (324)
Q Consensus 112 ~i~l~~H~DtVp~~~~~~~~~~~~~~g~~~grG~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G 183 (324)
+|+|.|||||||+++ .|+...+.+|++||||+ |++++++|++++.|++.+. ++++|.|+|+++||.+ .|
T Consensus 92 ~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~G 168 (396)
T 3rza_A 92 KLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIG 168 (396)
T ss_dssp CEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHH
T ss_pred eEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHh
Confidence 999999999999864 35332333599999995 4899999999999998764 6799999999999954 68
Q ss_pred HHHHHHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q 020605 184 AYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS 263 (324)
Q Consensus 184 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~ 263 (324)
++.+...+. ..|+.+..++ ..+.+.+... .+|..+++|+++|+++|+|.|+.|+||+..+++++..|+...
T Consensus 169 a~~~~~~~~--~~~~~~~~~~--~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~- 239 (396)
T 3rza_A 169 AKELNSELL--DADFGYAIDA--SADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ- 239 (396)
T ss_dssp HHHCCGGGC--CCSEEEEEEE--SSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEE-
T ss_pred Hhhhchhhc--ccceEEEEec--CCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCC-
Confidence 888876653 4677777765 3344544332 258899999999999999999999999999999999986521
Q ss_pred ccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 264 RETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 264 ~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
.+ ...+++++.|+||.+.|+||++|++.+|+|+.+.++.+++.+.|+++++..+..
T Consensus 240 --~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~ 295 (396)
T 3rza_A 240 --VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASE 295 (396)
T ss_dssp --EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHh
Confidence 11 247899999999999999999999999999999999999999999999887654
No 13
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=1.5e-40 Score=308.72 Aligned_cols=243 Identities=16% Similarity=0.117 Sum_probs=200.5
Q ss_pred HHHHHHHHHhccCCCCC--c---chHHHHHHHHHHHhhCCCceEecC---CCceEEEEeCCCCCCEEEEEEecccCCCCC
Q 020605 55 EWMRRIRRRIHENPELG--F---EEYETSQLVRSELDSLGIEYTWPV---AKTGIVASVGSGGEPWFGLRAEMDALPLQE 126 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~~~~~i~l~~H~DtVp~~~ 126 (324)
+++++++++|+++||++ + +|.++++||.++|+ |++++.+. +++|+++ ++++ |+|+|++||||||.++
T Consensus 9 ~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~vp~~~ 83 (369)
T 2f7v_A 9 ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTVPDSP 83 (369)
T ss_dssp HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecccCCCC
Confidence 88999999999999998 8 89999999999999 99987643 4689999 8654 7899999999999986
Q ss_pred -CCCCcccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCC-c-ccHHHHHHccCcCCcceE
Q 020605 127 -MVEWEHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGM 199 (324)
Q Consensus 127 -~~~~~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~~~~~~~~~~~d~~ 199 (324)
|+..||.. .+||++||||+ |++++++|.+++. ++++|.|+|++|||. + .|++.+++.+. ++|++
T Consensus 84 ~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~~d~~ 154 (369)
T 2f7v_A 84 HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--PYDAV 154 (369)
T ss_dssp SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--CCSEE
T ss_pred CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--CCCEE
Confidence 55668875 45899999994 8999999998876 678999999999996 5 69999999865 68999
Q ss_pred EEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCC-CCCCHHHHHHHHHHHHHHhhcccC----CCCCCceE
Q 020605 200 FGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQ-DTRDPVLAASFAILTLQHIVSRET----DPLEARVV 274 (324)
Q Consensus 200 i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~-~g~nAi~~l~~~l~~l~~~~~~~~----~~~~~~~~ 274 (324)
++.+++. +.+ ...++|..+++|+++|+++|+|.|+ .|.||+..+++++..|+.+..+.. ++...+++
T Consensus 155 i~~e~~~----~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 226 (369)
T 2f7v_A 155 LVAEPTM----SEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGLRF 226 (369)
T ss_dssp EECCCST----TCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESCEE
T ss_pred EECCCCC----Ccc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCCce
Confidence 9866532 221 2345799999999999999999999 999999999999999987754321 11112699
Q ss_pred EEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 275 TVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 275 ~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
|++.|+||.+.|+||++|++++|+|+++.++.+++.++|+++++.
T Consensus 227 ~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~ 271 (369)
T 2f7v_A 227 NIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADP 271 (369)
T ss_dssp EEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSS
T ss_pred EEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999887654
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.3e-40 Score=308.62 Aligned_cols=246 Identities=16% Similarity=0.097 Sum_probs=208.8
Q ss_pred HHHHHHHHHhccCCCCC---cchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCC---CCCCEEEEEEecccCCCCCCC
Q 020605 55 EWMRRIRRRIHENPELG---FEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGS---GGEPWFGLRAEMDALPLQEMV 128 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~---~~~~~i~l~~H~DtVp~~~~~ 128 (324)
+++++++++|+++||+| ++|.++++|+.++|+++|++++.+. .|+++.+.+ +++|+|+|.+||||||. +
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~--~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD--HDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE--ETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec--CCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 78999999999999999 8899999999999999999987643 567887752 34589999999999985 4
Q ss_pred CCccccc-cCCceeeccc---hHHHHHHHHHHHHHHhcCCCC---Cce--EEEEEeccCCC-c-ccHHHHHHccCcCCcc
Q 020605 129 EWEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRL---KGT--VKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQ 197 (324)
Q Consensus 129 ~~~~~~~-~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~dEE~-~-~G~~~~~~~~~~~~~d 197 (324)
..||... ++|++||||+ |++++++|++++.|++.+.++ +++ |.|+|+++||. + .|++.+++.+ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 6788765 4899999995 679999999999999876555 568 99999999995 4 5999999875 577
Q ss_pred eEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-C--CCceE
Q 020605 198 GMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDP-L--EARVV 274 (324)
Q Consensus 198 ~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~~~~~~~~~~-~--~~~~~ 274 (324)
+++.++ +++|++ +.. .++|..+++|+++|+++|+|.|+.|.||+..+++++..|+.+.. ++ . +.+++
T Consensus 158 ~~i~~d--~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~~ 227 (364)
T 2rb7_A 158 YVVALD--GGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRTV 227 (364)
T ss_dssp EEEECS--SSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCEE
T ss_pred EEEEcc--CCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCceE
Confidence 777654 456777 322 23689999999999999999999999999999999999987632 12 2 36899
Q ss_pred EEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHH
Q 020605 275 TVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKL 318 (324)
Q Consensus 275 ~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~ 318 (324)
+++.|+||.+.|+||++|++++|+|+++.++.+++.+.|+++++
T Consensus 228 ~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~ 271 (364)
T 2rb7_A 228 NLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVS 271 (364)
T ss_dssp EEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCS
T ss_pred EEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999988753
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=3.3e-40 Score=316.65 Aligned_cols=276 Identities=13% Similarity=0.071 Sum_probs=225.2
Q ss_pred HHHHHHhccCcchHH-HHHHHHHHhccCCCCCcch---HHHHHHHHHHHhhCCCceEecC--CCceEEEEeCCC--CCCE
Q 020605 41 TRELLDSAREPEFFE-WMRRIRRRIHENPELGFEE---YETSQLVRSELDSLGIEYTWPV--AKTGIVASVGSG--GEPW 112 (324)
Q Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~--~~~~ 112 (324)
++++.++++..+ + ++++++++|++|||+|++| .++++||.++|+++|++++.+. +++|++++++++ ++|+
T Consensus 31 m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 31 QEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 467888888877 8 9999999999999999876 8999999999999999987753 468999999653 4689
Q ss_pred EEEEEecccCCCCCCCCC---cccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccH
Q 020605 113 FGLRAEMDALPLQEMVEW---EHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGA 184 (324)
Q Consensus 113 i~l~~H~DtVp~~~~~~~---~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~ 184 (324)
|+|+|||||||.++.+.| ||.. .+||++||||+ |++++++|+|++.|++.+..++++|.|+|+++||.+ .|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 999999999999876667 7765 45899999993 899999999999999885578899999999999954 688
Q ss_pred HHHHHcc--CcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecC--CCCCCCCCCCCHHHHHHHHHHHHHH
Q 020605 185 YYMIKEG--AVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKG--GHAAMPQDTRDPVLAASFAILTLQH 260 (324)
Q Consensus 185 ~~~~~~~--~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~--~Hs~~p~~g~nAi~~l~~~l~~l~~ 260 (324)
+.+++++ .++++|+++..+++... .+.... ...++|..+++|+++|++ +||+.|+.|.|||..+++++..|++
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~i--~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~ 265 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQGTKNA-LEQLEI--SGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRA 265 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCCBBCT-TSCEEE--ECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBC
T ss_pred HHHHHHhHhhccCCCEEEECCCCccC-CCCeeE--EEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhC
Confidence 8888764 13337888876542211 111122 234589999999999999 8999999999999999999999876
Q ss_pred hh-----------------------ccc--------------CCC-------------CCCceEEEEEEEcCC----CCc
Q 020605 261 IV-----------------------SRE--------------TDP-------------LEARVVTVGFIDAGQ----AGN 286 (324)
Q Consensus 261 ~~-----------------------~~~--------------~~~-------------~~~~~~~v~~i~gg~----~~n 286 (324)
.. .+. ..+ ...+++|++.|+||. +.|
T Consensus 266 ~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~N 345 (481)
T 2pok_A 266 ADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKT 345 (481)
T ss_dssp TTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCC
T ss_pred CCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCe
Confidence 42 000 000 024799999999986 789
Q ss_pred ccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 020605 287 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEV 321 (324)
Q Consensus 287 ~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a 321 (324)
+||++|++++|+|++|.++.+++.++|+++++..+
T Consensus 346 vIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 380 (481)
T 2pok_A 346 ILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNG 380 (481)
T ss_dssp EECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTT
T ss_pred eccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998753
No 16
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=9.7e-40 Score=313.27 Aligned_cols=274 Identities=11% Similarity=0.045 Sum_probs=223.7
Q ss_pred HHHHHhccCcchHHHHHHHHHHhccCCCCCcch------HHHHHHHHHHHhhCCCceEecC--------CC-----ceEE
Q 020605 42 RELLDSAREPEFFEWMRRIRRRIHENPELGFEE------YETSQLVRSELDSLGIEYTWPV--------AK-----TGIV 102 (324)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nvi 102 (324)
+++.++++... +++++++++|+++||+|++| .++++||+++|+++|++++.+. ++ +|++
T Consensus 9 ~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (479)
T 2zog_A 9 KAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILL 86 (479)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEE
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEE
Confidence 45667777666 89999999999999999876 7899999999999999987643 22 7999
Q ss_pred EEeCCC-CCCEEEEEEecccCCCCCCCCC---ccccc-cCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEE
Q 020605 103 ASVGSG-GEPWFGLRAEMDALPLQEMVEW---EHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVF 174 (324)
Q Consensus 103 a~~~~~-~~~~i~l~~H~DtVp~~~~~~~---~~~~~-~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~ 174 (324)
++++++ ++|+|+|+|||||||.++...| ||... +||++|||| +|++++++|+|++.|++.+.+++++|.|+|
T Consensus 87 a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 87 GKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 999764 4699999999999998764455 67653 689999999 369999999999999998878889999999
Q ss_pred eccCCC-cccHHHHHHcc---CcCCcceEEEeccCCCCC-CceEEeecccccceeeEEEEEEEecC--CCCCCCCCCCCH
Q 020605 175 QPGEEG-YGGAYYMIKEG---AVDKFQGMFGIHISPVLP-TGTVGSRPGPLLAGSGRFTAVIKGKG--GHAAMPQDTRDP 247 (324)
Q Consensus 175 ~~dEE~-~~G~~~~~~~~---~~~~~d~~i~~~~~~~~~-~~~~~~~~g~~~~G~~~~~i~~~G~~--~Hs~~p~~g~nA 247 (324)
++|||. +.|++.+++++ ++.++|++++.|++...+ .+.+. ..++|..+++|+++|++ +|||.+ |.||
T Consensus 167 ~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~a 240 (479)
T 2zog_A 167 EGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGSV 240 (479)
T ss_dssp ESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTTS
T ss_pred ecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCCc
Confidence 999995 46999999875 444689999887532111 22222 23479999999999999 999985 7899
Q ss_pred HHHHHHHHHHHHHhhcccC-----------C-------------CC---------------------------CCceEEE
Q 020605 248 VLAASFAILTLQHIVSRET-----------D-------------PL---------------------------EARVVTV 276 (324)
Q Consensus 248 i~~l~~~l~~l~~~~~~~~-----------~-------------~~---------------------------~~~~~~v 276 (324)
+..+++++..|+.+..+.. . +. ..+++++
T Consensus 241 i~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 320 (479)
T 2zog_A 241 HEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSL 320 (479)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEE
Confidence 9999999988876543210 0 00 1478999
Q ss_pred EEEEcC----CCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 277 GFIDAG----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 277 ~~i~gg----~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
+.|+|| .+.|+||++|++++++|+.|.++.+++.+.|+++++..+++
T Consensus 321 ~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~ 371 (479)
T 2zog_A 321 HGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAE 371 (479)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Confidence 999998 89999999999999999999999999999999999887643
No 17
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=1.8e-39 Score=301.77 Aligned_cols=252 Identities=18% Similarity=0.184 Sum_probs=213.0
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCC-------CceEEEEeCCC--CCCEEEEEEecccCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVA-------KTGIVASVGSG--GEPWFGLRAEMDALPLQ 125 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~-------~~nvia~~~~~--~~~~i~l~~H~DtVp~~ 125 (324)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+.. ++|++++++++ ++|+|+|.|||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 8899999999999999999999999999999999999987542 57999999764 46999999999999986
Q ss_pred CCCCCccccccCCceeeccc-------hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcc
Q 020605 126 EMVEWEHKSKNNGKMHGCGH-------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQ 197 (324)
Q Consensus 126 ~~~~~~~~~~~~g~~~grG~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d 197 (324)
+ .|+. ..++|++||||+ |++++++|.+++.|++.+. ++++|.|+|+++||.+ .|++.+..++. ..|
T Consensus 86 ~--~~~p-~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIKP-SIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCCC-EEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcCc-EEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 4 3421 346899999994 4899999999999998764 7899999999999954 68888866543 567
Q ss_pred eEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEE
Q 020605 198 GMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTV 276 (324)
Q Consensus 198 ~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v 276 (324)
+.+..++ ..+.+.+... .+|..+++++++|+++|++ .|+.|+||+..+++++..|+.. .. ....++++
T Consensus 160 ~~~~~~~--~~~~g~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~--~~~~~~~v 228 (373)
T 3gb0_A 160 YGYALDS--DGKVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RI--DSETTANI 228 (373)
T ss_dssp EEEEEEE--CSCTTEEEEE----ECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EE--ETTEEEEE
T ss_pred EEEEEcC--CCCCCeEEEc----CCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cC--CCccccce
Confidence 8877765 3344544332 2688999999999999999 7999999999999999988652 11 13478999
Q ss_pred EEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 277 GFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 277 ~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
+.|+||.+.|+||++|++.+|+|+.+.++.+++.++|+++++..++.
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~ 275 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKE 275 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887654
No 18
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.1e-39 Score=310.23 Aligned_cols=275 Identities=13% Similarity=0.006 Sum_probs=215.7
Q ss_pred HHHHHHhccCcchHHHHHHHHHHhccCCCCCcc----------hHHHHHHHHHHHhhCCCc---eEe--cCC-CceEEEE
Q 020605 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFE----------EYETSQLVRSELDSLGIE---YTW--PVA-KTGIVAS 104 (324)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~---~~~--~~~-~~nvia~ 104 (324)
.+++.+++++.. .+++++++++|++|||+|++ |.++++|+.++|+++|++ ++. ..+ ++|++|+
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~ 83 (472)
T 3pfe_A 5 PQGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFME 83 (472)
T ss_dssp HHHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEE
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEE
Confidence 445666766531 15799999999999999965 889999999999999985 443 223 5899999
Q ss_pred eCCCCCCEEEEEEecccCCCCCC-C--CCcccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEecc
Q 020605 105 VGSGGEPWFGLRAEMDALPLQEM-V--EWEHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPG 177 (324)
Q Consensus 105 ~~~~~~~~i~l~~H~DtVp~~~~-~--~~~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~d 177 (324)
++++++|+|+|+|||||||+++. + ..||.. .+||++||||+ |++++++|+|++.|++.+..++ +|.|+|++|
T Consensus 84 ~~g~~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~ 162 (472)
T 3pfe_A 84 IPGQIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEAC 162 (472)
T ss_dssp ECCSEEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESC
T ss_pred EcCCCCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeC
Confidence 97654689999999999998532 3 457776 46999999994 6999999999999998876666 999999999
Q ss_pred CCCc-ccHHHHHHcc--CcCCcceEEEeccCCCCCCceEEeecccccceeeEEE--EEEEecCCCCCCCCCC-CCHHHHH
Q 020605 178 EEGY-GGAYYMIKEG--AVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFT--AVIKGKGGHAAMPQDT-RDPVLAA 251 (324)
Q Consensus 178 EE~~-~G~~~~~~~~--~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~--i~~~G~~~Hs~~p~~g-~nAi~~l 251 (324)
||.+ .|++.+++++ .++++|++++.|++...+ +...... .++|..+++ |+++|+++|+|.|+.. .|||..+
T Consensus 163 EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~~--g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~ 239 (472)
T 3pfe_A 163 EESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWMTT--SLRGNLVGKLTVELINEGVHSGSASGIVADSFRVA 239 (472)
T ss_dssp GGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEEE--EECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHH
T ss_pred CCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEEE--eeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHH
Confidence 9954 7999999875 344689999988543221 1112222 235777766 5558999999987654 5999999
Q ss_pred HHHHHHHHHhh-ccc--------C-----------------------------CCCC------------CceEEEEEEEc
Q 020605 252 SFAILTLQHIV-SRE--------T-----------------------------DPLE------------ARVVTVGFIDA 281 (324)
Q Consensus 252 ~~~l~~l~~~~-~~~--------~-----------------------------~~~~------------~~~~~v~~i~g 281 (324)
++++.+|++.. .+. . .+.. .+++|++.|+|
T Consensus 240 ~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~g 319 (472)
T 3pfe_A 240 RQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADG 319 (472)
T ss_dssp HHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEES
T ss_pred HHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeec
Confidence 99999998762 100 0 0010 47999999999
Q ss_pred C----CCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 020605 282 G----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFE 320 (324)
Q Consensus 282 g----~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~ 320 (324)
| .+.|+||++|++++|+|+.+.++.+++.+.|+++++..
T Consensus 320 G~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 362 (472)
T 3pfe_A 320 FPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQN 362 (472)
T ss_dssp CCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSS
T ss_pred CcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhh
Confidence 7 79999999999999999999999999999999998764
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2.6e-38 Score=299.76 Aligned_cols=251 Identities=16% Similarity=0.056 Sum_probs=203.5
Q ss_pred HHHHHHHHHhccCCCCCc----------chHHHHHHHHHHHhhCCCc-eEecCCCceEEEEeCCC---CCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG---GEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~i~l~~H~D 120 (324)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+. ..|+++++++. .+|+|+|+||||
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d~-~~nv~a~~~g~~~~~~~~v~l~~H~D 105 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDD-NGYVMATLPANTDKDVPVIGFLAHLD 105 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEECT-TSCEEEEECCBSSSCCCCEEEEEECC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEECC-CcEEEEEeCCCCCCCCCeEEEEEEcc
Confidence 789999999999999998 5689999999999999997 87654 56899999754 258999999999
Q ss_pred cCCCCCCCCC---ccccc-c----------------------------CCceeeccc-------hHHHHHHHHHHHHHHh
Q 020605 121 ALPLQEMVEW---EHKSK-N----------------------------NGKMHGCGH-------DVHTTILLGAARLLKH 161 (324)
Q Consensus 121 tVp~~~~~~~---~~~~~-~----------------------------~g~~~grG~-------kg~~a~~l~a~~~l~~ 161 (324)
|||..+ .| ||... . +|++||||+ |++++++|+|++.|++
T Consensus 106 tVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~ 183 (434)
T 3ife_A 106 TATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIH 183 (434)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHh
Confidence 999643 45 33211 1 258999994 8999999999999999
Q ss_pred cCCCCCceEEEEEeccCCCcccHHHHHHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCC-C
Q 020605 162 RMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-M 240 (324)
Q Consensus 162 ~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~-~ 240 (324)
.+..++++|.|+|++|||.+.|++.+....+ ++|++++.|++ +.+.+.. ..+|..+++|+++|+++||| .
T Consensus 184 ~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~~--~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag~~ 254 (434)
T 3ife_A 184 NPQIKHGKIRVAFTPDEEIGRGPAHFDVEAF--GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPGTA 254 (434)
T ss_dssp CTTSCBCCEEEEEESCGGGTCTGGGCCHHHH--CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGGGC
T ss_pred CCCCCCCCEEEEEECCcccChHHHHhhhhhc--CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCCCC
Confidence 8878899999999999997788887754433 58999998843 3454433 34799999999999999998 7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 020605 241 PQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFE 320 (324)
Q Consensus 241 p~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~ 320 (324)
|+.|+||+..+++++..|+....+. .++.+++.+++| ..|+||++|++++|+|+++.++.+++.+.|++++++.
T Consensus 255 P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 328 (434)
T 3ife_A 255 KNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQM 328 (434)
T ss_dssp TTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998752111 122233444544 3788999999999999999999999999999999887
Q ss_pred Hhh
Q 020605 321 VAY 323 (324)
Q Consensus 321 a~~ 323 (324)
+++
T Consensus 329 ~~~ 331 (434)
T 3ife_A 329 QEK 331 (434)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=2.2e-37 Score=297.53 Aligned_cols=266 Identities=13% Similarity=0.064 Sum_probs=198.2
Q ss_pred HHHHHhccCcchHHHHHHHHHHhccCCCCCcch------------HHHHHHHHHHHhhCCCceEecCCCceEEEEeC-CC
Q 020605 42 RELLDSAREPEFFEWMRRIRRRIHENPELGFEE------------YETSQLVRSELDSLGIEYTWPVAKTGIVASVG-SG 108 (324)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~~ 108 (324)
.++.++++..+ +++++++++|++|||+|++| .++++|+.++|+++|++++... |+++.+. +.
T Consensus 23 ~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~g~ 97 (492)
T 3khx_A 23 SMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAGK 97 (492)
T ss_dssp CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEEEC
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEeCC
Confidence 45677788877 99999999999999999876 4899999999999999987643 3444432 22
Q ss_pred CCCEEEEEEecccCCCCC-CCCCcccc-ccCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCC-cc
Q 020605 109 GEPWFGLRAEMDALPLQE-MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YG 182 (324)
Q Consensus 109 ~~~~i~l~~H~DtVp~~~-~~~~~~~~-~~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~~ 182 (324)
++|+|+|+|||||||+++ |+..||.. .+||++|||| +|++++++|+|++.|++.+.+++++|.|+|++|||. +.
T Consensus 98 ~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 177 (492)
T 3khx_A 98 GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWK 177 (492)
T ss_dssp SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCCC
T ss_pred CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCc
Confidence 358999999999999965 23337875 5699999999 389999999999999998878899999999999995 47
Q ss_pred cHHHHHHccCcCCcceEEEeccCCC----------------------------------------CCCce--EEeec---
Q 020605 183 GAYYMIKEGAVDKFQGMFGIHISPV----------------------------------------LPTGT--VGSRP--- 217 (324)
Q Consensus 183 G~~~~~~~~~~~~~d~~i~~~~~~~----------------------------------------~~~~~--~~~~~--- 217 (324)
|+++++++.. .+|+.+..+.... .|... +...+
T Consensus 178 g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~ 255 (492)
T 3khx_A 178 CTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENM 255 (492)
T ss_dssp TTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCH
T ss_pred CHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccch
Confidence 9999998753 3444443221000 01100 11111
Q ss_pred ------------ccccceee-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh-------cc---
Q 020605 218 ------------GPLLAGSG-----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ------HIV-------SR--- 264 (324)
Q Consensus 218 ------------g~~~~G~~-----~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~------~~~-------~~--- 264 (324)
....+|.. +++|+++|+++|+|.|+.|.|||..+++++.+|. .+. ..
T Consensus 256 ~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 335 (492)
T 3khx_A 256 TDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDF 335 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTT
T ss_pred HHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCC
Confidence 11236888 9999999999999999999999999999999886 111 00
Q ss_pred --------cCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 265 --------ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 265 --------~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
.....+.+++|++.|++|. |++|++++|+|+++..+.+++.++|+++++.
T Consensus 336 ~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~~ 393 (492)
T 3khx_A 336 GEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQQ 393 (492)
T ss_dssp SGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHGG
T ss_pred ccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 0112357899999999986 9999999999999999999999999988753
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=2.5e-37 Score=291.60 Aligned_cols=252 Identities=13% Similarity=0.078 Sum_probs=207.4
Q ss_pred HHHHHHHHHhccCCCCCc----------chHHHHHHHHHHHhhCCCc-eEecCCCceEEEEeCCC---CCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG---GEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~i~l~~H~D 120 (324)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ...|++++++++ ++|+|+|.||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 457889999999999998 6889999999999999998 7655 456899999653 358999999999
Q ss_pred cCCCCCCCC-Ccc-----ccc-----------------------cCCceeecc-----c--hHHHHHHHHHHHHHHhcCC
Q 020605 121 ALPLQEMVE-WEH-----KSK-----------------------NNGKMHGCG-----H--DVHTTILLGAARLLKHRMD 164 (324)
Q Consensus 121 tVp~~~~~~-~~~-----~~~-----------------------~~g~~~grG-----~--kg~~a~~l~a~~~l~~~~~ 164 (324)
|||..+... .|| ... .||++|||| . |++++++|++++.|++.+
T Consensus 81 ~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~- 159 (417)
T 1fno_A 81 TSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP- 159 (417)
T ss_dssp BCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-
T ss_pred ccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC-
Confidence 999865211 143 221 256899999 4 589999999999999887
Q ss_pred CCCceEEEEEeccCCCcccHHHHHHccCcCCcceEEEeccCCCCCCceEEeecccccceeeEEEEEEEecCCCCC-CCCC
Q 020605 165 RLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQD 243 (324)
Q Consensus 165 ~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~~~G~~~Hs~-~p~~ 243 (324)
.++++|.|+|+++||.+.|++.+.++++ ++|+++.++++ +.+.+. ...+|..+++|+++|+++|+| .|+.
T Consensus 160 ~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~~---~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p~~ 230 (417)
T 1fno_A 160 IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDGG---GVGELE----FENFNAASVNIKIVGNNVHPGTAKGV 230 (417)
T ss_dssp CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCCC---STTBEE----CCBCEEEEEEEEEECBCCCGGGCTTT
T ss_pred CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCCC---CcCeeE----EecCCceeEEEEEEeeccCCCCCccc
Confidence 7889999999999996688887775553 57888887753 345543 234799999999999999999 6999
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHHHhh
Q 020605 244 TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEVAY 323 (324)
Q Consensus 244 g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a~~ 323 (324)
|.||+..+++++..|+.+..+........+++++.|+|| |++|++++|+|+.+.++.+++.++|++++++.+++
T Consensus 231 g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~ 304 (417)
T 1fno_A 231 MVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKG 304 (417)
T ss_dssp CBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876543333334568999999998 99999999999999999999999999999887653
No 22
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=7.1e-36 Score=286.73 Aligned_cols=249 Identities=15% Similarity=0.110 Sum_probs=198.4
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC----CCCEEEEEEecccCCCCCCC--
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQEMV-- 128 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtVp~~~~~-- 128 (324)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. ..|+++++++. ++|+|+|+|||||||..+.+
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP-TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC-CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 889999999999999999999999999999999999998754 44899999752 46899999999999987532
Q ss_pred -CC---cccc-ccCCceeeccc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCc
Q 020605 129 -EW---EHKS-KNNGKMHGCGH----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKF 196 (324)
Q Consensus 129 -~~---~~~~-~~~g~~~grG~----k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~ 196 (324)
.| ||.. .++|++||||+ | +++|++|.++ ++ ...++++|.|+|++|||.+ .|++.+++..+ +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGWL--KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSSC--CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhccc--CC
Confidence 45 5654 46899999996 4 5777777765 23 3356899999999999955 79998887533 57
Q ss_pred ceEEEeccCCCCCC--ceEEe---------ecccccceeeEEEEEEEe-cCCCCCC-CCCCC-CHHHHHHHHHHHHHHhh
Q 020605 197 QGMFGIHISPVLPT--GTVGS---------RPGPLLAGSGRFTAVIKG-KGGHAAM-PQDTR-DPVLAASFAILTLQHIV 262 (324)
Q Consensus 197 d~~i~~~~~~~~~~--~~~~~---------~~g~~~~G~~~~~i~~~G-~~~Hs~~-p~~g~-nAi~~l~~~l~~l~~~~ 262 (324)
|+++.+|+++.... +.... .....++|..+++|+++| +++|+|. |+.|+ |||..+++++..|++.
T Consensus 167 ~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~- 245 (490)
T 3mru_A 167 DILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE- 245 (490)
T ss_dssp SEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-
T ss_pred CEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-
Confidence 88888775321110 10000 012345799999999999 9999995 99999 9999999999999752
Q ss_pred cccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 020605 263 SRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLFE 320 (324)
Q Consensus 263 ~~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~ 320 (324)
.+++++.|+||.+.|+||++|++.+++|..+.+..++..+.+.+.++..
T Consensus 246 ---------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~ 294 (490)
T 3mru_A 246 ---------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTE 294 (490)
T ss_dssp ---------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHH
T ss_pred ---------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999887777777777777666543
No 23
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=9.4e-36 Score=281.26 Aligned_cols=244 Identities=18% Similarity=0.166 Sum_probs=201.3
Q ss_pred HHHHHHHHHhccCCCCC----------cchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-C-CCEEEEEEecccC
Q 020605 55 EWMRRIRRRIHENPELG----------FEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDAL 122 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtV 122 (324)
+++++++++|++|||++ ++|.++++|+.++|+++|++++.+..+ |++++++++ + +|+|+|.||||||
T Consensus 9 ~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~~g-nv~a~~~g~~~~~~~i~l~~H~D~V 87 (423)
T 1z2l_A 9 QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG-NLYGRLNGTEYPQEVVLSGSHIDTV 87 (423)
T ss_dssp HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECTTS-CEEEEECCSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEecCC-cEEEEEcCCCCCCCEEEEEEecCCC
Confidence 78999999999999988 678999999999999999998876544 899999654 3 3899999999999
Q ss_pred CCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc------ccHHHHHH----c--
Q 020605 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK----E-- 190 (324)
Q Consensus 123 p~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~------~G~~~~~~----~-- 190 (324)
|.+. | .++|++++++|++++.|++.+.+++++|.|+|+++||++ .|++.+.. +
T Consensus 88 p~~g---~------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 152 (423)
T 1z2l_A 88 VNGG---N------------LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 152 (423)
T ss_dssp TTBC---S------------STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGT
T ss_pred CCCC---c------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHH
Confidence 9742 1 134789999999999999988788999999999999964 28888875 2
Q ss_pred ------------------cCc---------CCcceEEEeccCCC-------CCCceEEeecccccceeeEEEEEEEecCC
Q 020605 191 ------------------GAV---------DKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGG 236 (324)
Q Consensus 191 ------------------~~~---------~~~d~~i~~~~~~~-------~~~~~~~~~~g~~~~G~~~~~i~~~G~~~ 236 (324)
|+. +++|+++.+|.+++ .+.+.+. .++|..+++|+++|+++
T Consensus 153 ~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~-----~~~g~~~~~i~v~G~~~ 227 (423)
T 1z2l_A 153 RNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVN-----AIVGQRRYTVTLNGESN 227 (423)
T ss_dssp SSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEE-----EECEEEEEEEEEECCCE
T ss_pred hhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEe-----eEecceEEEEEEEeEcC
Confidence 211 13567777776554 1223322 24688999999999999
Q ss_pred CCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcC-CCCcccCCeEEEEEEEecCChhhHHHHHHHH
Q 020605 237 HAA-MPQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRI 313 (324)
Q Consensus 237 Hs~-~p~-~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i 313 (324)
|+| .|+ .|.||+..+++++..|+++..+. ++ .++++++.|+|| .+.|+||++|++.+|+|+++.++.+++.+.|
T Consensus 228 Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i 304 (423)
T 1z2l_A 228 HAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQL 304 (423)
T ss_dssp ETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHH
Confidence 999 695 89999999999999998775432 22 578999999996 8999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 020605 314 KEVKLFEVA 322 (324)
Q Consensus 314 ~~~i~~~a~ 322 (324)
+++++..++
T Consensus 305 ~~~~~~~~~ 313 (423)
T 1z2l_A 305 ENDMRAICD 313 (423)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988654
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=1.2e-34 Score=272.56 Aligned_cols=243 Identities=22% Similarity=0.190 Sum_probs=202.8
Q ss_pred HHHHHHHHHhccCCCC----------CcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-C-CCEEEEEEecccC
Q 020605 55 EWMRRIRRRIHENPEL----------GFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDAL 122 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtV 122 (324)
+++++++++|++|||+ |++|.++++|+.++|+++|++++.+..+ |++++++++ + +|+|+|.+|||||
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~~g-nv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAG-NLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECTTC-CEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcCCC-CEEEEecCCCCCCCEEEEEecCCCC
Confidence 7889999999999993 7899999999999999999999876555 899999764 3 6999999999999
Q ss_pred CCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc------ccHHHHH--------
Q 020605 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMI-------- 188 (324)
Q Consensus 123 p~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~------~G~~~~~-------- 188 (324)
|.+. . .++|++++++|++++.|++.+..++++|.|+|+++||++ .|++.++
T Consensus 84 ~~~g------------~---~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNGG------------C---FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTBC------------S---STTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCCC------------c---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 9641 1 134788999999999999988789999999999999953 3888887
Q ss_pred ---------------HccC----c-----C--CcceEEEeccCCC-------CCCceEEeecccccceeeEEEEEEEecC
Q 020605 189 ---------------KEGA----V-----D--KFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKG 235 (324)
Q Consensus 189 ---------------~~~~----~-----~--~~d~~i~~~~~~~-------~~~~~~~~~~g~~~~G~~~~~i~~~G~~ 235 (324)
+.|+ + + ++|+++.+|++++ .+.+.+. .++|..+++|+++|++
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~-----~~~g~~~~~i~v~G~~ 223 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT-----GIAGLIWVKFTIEGKA 223 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEE-----EECEEEEEEEEEECCC
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEE-----EeccceEEEEEEEEEc
Confidence 1222 1 1 4678888887664 2333332 2479999999999999
Q ss_pred CCC-CCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcC-CCCcccCCeEEEEEEEecCChhhHHHHHHH
Q 020605 236 GHA-AMP-QDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQR 312 (324)
Q Consensus 236 ~Hs-~~p-~~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~ 312 (324)
+|+ +.| +.|.||+..+++++..|+.+. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.+++.+.
T Consensus 224 ~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~ 299 (408)
T 3n5f_A 224 EHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKA 299 (408)
T ss_dssp EETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHH
Confidence 999 589 589999999999999998875 2222 689999999997 999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 020605 313 IKEVKLFEVA 322 (324)
Q Consensus 313 i~~~i~~~a~ 322 (324)
|+++++..++
T Consensus 300 i~~~~~~~a~ 309 (408)
T 3n5f_A 300 IAVRAETIAK 309 (408)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1.9e-35 Score=282.98 Aligned_cols=245 Identities=19% Similarity=0.142 Sum_probs=201.4
Q ss_pred HHHHHHHHHh-ccCCCC-----------------CcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-CCCEEEE
Q 020605 55 EWMRRIRRRI-HENPEL-----------------GFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGL 115 (324)
Q Consensus 55 ~~~~~~~~~l-~~ips~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l 115 (324)
+++++.+++| ++|||+ +++|.++++||.++|+++|++++.+..+ |+++++++. ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~~g-nvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIG-NMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBTTC-CEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEecCc-eEEEEECCCCCCCeEEE
Confidence 8899999999 999987 3678999999999999999998875444 799999654 4579999
Q ss_pred EEecccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc------ccHHHHHH
Q 020605 116 RAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK 189 (324)
Q Consensus 116 ~~H~DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~------~G~~~~~~ 189 (324)
+|||||||.++ | | ++|++++++|+|++.|++.+.+++++|.|+|++|||++ .|++.+..
T Consensus 111 ~~H~DtVp~~g---~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEAG---K----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSBC---S----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCCC---C----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 99999999853 3 1 55899999999999999988888999999999999963 27888753
Q ss_pred ---------------------------ccCc---------CCcceEEEeccCCCCCCc----eEEeecccccceeeEEEE
Q 020605 190 ---------------------------EGAV---------DKFQGMFGIHISPVLPTG----TVGSRPGPLLAGSGRFTA 229 (324)
Q Consensus 190 ---------------------------~~~~---------~~~d~~i~~~~~~~~~~~----~~~~~~g~~~~G~~~~~i 229 (324)
.|+. +++|+.+.+|.+++...+ ..... ..++|..+++|
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~--~~~~G~~~~~i 253 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIV--TGVQAYNWQKV 253 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEE--EEECEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeE--EeecceEEEEE
Confidence 1221 346778888766542111 11111 12368899999
Q ss_pred EEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEcC-CCCcccCCeEEEEEEEecCChhhH
Q 020605 230 VIKGKGGHAA-MPQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGL 306 (324)
Q Consensus 230 ~~~G~~~Hs~-~p~-~g~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~ 306 (324)
+++|+++|+| .|+ .|.|||..+++++..|+.+..+. .++++++.|+|| .+.|+||++|++++|+|+++.++.
T Consensus 254 ~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~ 328 (474)
T 2v8h_A 254 TVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVL 328 (474)
T ss_dssp EEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHH
T ss_pred EEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHH
Confidence 9999999999 597 89999999999999998765442 579999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 020605 307 LYLEQRIKEVKLFEVA 322 (324)
Q Consensus 307 ~~~~~~i~~~i~~~a~ 322 (324)
+++.+.|++++++.+.
T Consensus 329 ~~i~~~i~~~~~~~~~ 344 (474)
T 2v8h_A 329 ATMLKEAAAEFDRLIK 344 (474)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988654
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-34 Score=277.12 Aligned_cols=265 Identities=15% Similarity=0.110 Sum_probs=199.3
Q ss_pred HHHhccCcchHHHHHHHHHHhccCCCCCcch------------HHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCC
Q 020605 44 LLDSAREPEFFEWMRRIRRRIHENPELGFEE------------YETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEP 111 (324)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~ 111 (324)
+.+++++.+ +++++++++|++|||+|++| .++++|+.++|+++|++++.. ++.++++.++. ++|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~-~~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGA-GDK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECC-CSS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCC-CCC
Confidence 455666666 89999999999999999876 689999999999999998753 34568888843 358
Q ss_pred EEEEEEecccCCCCC-CCCCccccc--cCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccH
Q 020605 112 WFGLRAEMDALPLQE-MVEWEHKSK--NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGA 184 (324)
Q Consensus 112 ~i~l~~H~DtVp~~~-~~~~~~~~~--~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~ 184 (324)
+|+|+|||||||+++ |...||... +||++|||| +|++++++|+|++.|++.+.+++++|.|+|++|||.+ .|+
T Consensus 81 ~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~ 160 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGI 160 (470)
T ss_dssp EEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHH
T ss_pred eEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccH
Confidence 999999999999876 344588865 699999999 3799999999999999988788999999999999954 689
Q ss_pred HHHHHccCcC----Ccce---EEEeccC--------CCCC-Cce---EEeeccc--------------------------
Q 020605 185 YYMIKEGAVD----KFQG---MFGIHIS--------PVLP-TGT---VGSRPGP-------------------------- 219 (324)
Q Consensus 185 ~~~~~~~~~~----~~d~---~i~~~~~--------~~~~-~~~---~~~~~g~-------------------------- 219 (324)
+.+++.+... ..|. ++..+.+ .+.+ .+. .....|.
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~ 240 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYE 240 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHH
Confidence 9999875321 1222 1111100 0000 000 0000000
Q ss_pred ------ccceee-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh---ccc--------------
Q 020605 220 ------LLAGSG-----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ------HIV---SRE-------------- 265 (324)
Q Consensus 220 ------~~~G~~-----~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~------~~~---~~~-------------- 265 (324)
..+|.. +++|+++|+++|++.|+.|.||+..+++++..|+ .+. .+.
T Consensus 241 ~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (470)
T 1lfw_A 241 SFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFH 320 (470)
T ss_dssp HHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCC
T ss_pred HHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCcc
Confidence 123543 8999999999999999999999999999998875 211 110
Q ss_pred CC-CCCCceEEEEEEEcCCCCcccCCe-EEEEEEEecCChhhHHHHHHHHHHHHH
Q 020605 266 TD-PLEARVVTVGFIDAGQAGNIIPEI-VRFGGTFRSLTTEGLLYLEQRIKEVKL 318 (324)
Q Consensus 266 ~~-~~~~~~~~v~~i~gg~~~n~iP~~-a~~~~d~R~~~~~~~~~~~~~i~~~i~ 318 (324)
.+ ....+++|++.+++ +|++ |++++|+|+++.++.+++.++|+++++
T Consensus 321 ~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~ 369 (470)
T 1lfw_A 321 HDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFS 369 (470)
T ss_dssp EETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred cccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhc
Confidence 00 11346888888775 6999 999999999999999999999998875
No 27
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=2.5e-34 Score=276.21 Aligned_cols=245 Identities=13% Similarity=0.116 Sum_probs=194.3
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC----CCCEEEEEEecccCCCCCCC--
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQEMV-- 128 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtVp~~~~~-- 128 (324)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+.. .|++++++++ ++|+|+|.|||||||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~-~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDEV-GNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECTT-CCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcCC-CcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 8899999999999999999999999999999999999887543 5899999652 35899999999999997543
Q ss_pred -CC---ccccc-cCCceeeccc----h--HHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCc
Q 020605 129 -EW---EHKSK-NNGKMHGCGH----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKF 196 (324)
Q Consensus 129 -~~---~~~~~-~~g~~~grG~----k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~ 196 (324)
.| ||... +||++||||+ | ++++++|.+++. .+ .++++|.|+|+++||.+ .|++.++++++ .+
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGMEGAIGLRPNWL--RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSCC--CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCCHHHHHHHHhcc--CC
Confidence 45 67643 5899999996 3 788888888762 33 47799999999999954 69999887653 48
Q ss_pred ceEEEeccCCCCCCceEEe-ecc-------------cccceeeEEEEEEEe-cCCCCCCC-CCC-CCHHHHHHHHHHHHH
Q 020605 197 QGMFGIHISPVLPTGTVGS-RPG-------------PLLAGSGRFTAVIKG-KGGHAAMP-QDT-RDPVLAASFAILTLQ 259 (324)
Q Consensus 197 d~~i~~~~~~~~~~~~~~~-~~g-------------~~~~G~~~~~i~~~G-~~~Hs~~p-~~g-~nAi~~l~~~l~~l~ 259 (324)
|+++..++++ .+.+.. ..| ..++| .+++|+++| +++|||.| +.+ .||+..+++++..|+
T Consensus 164 d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 9988877542 233321 111 12345 789999999 89999986 676 799999999999998
Q ss_pred HhhcccCCCCCCceEEEEEEEcCCCCcccCCeEEEEEEE----------------------------------------e
Q 020605 260 HIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTF----------------------------------------R 299 (324)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~----------------------------------------R 299 (324)
.+. ...+++++.|+||.+.|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 762 14679999999999999999999999999 7
Q ss_pred cCChhhHHHHHHHHHHHH
Q 020605 300 SLTTEGLLYLEQRIKEVK 317 (324)
Q Consensus 300 ~~~~~~~~~~~~~i~~~i 317 (324)
+.|.++.+++.+.|++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~ 330 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLP 330 (487)
T ss_dssp EECHHHHHHHHHHHHHSC
T ss_pred ccCHHHHHHHHHHHHhCC
Confidence 777777777777777663
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.95 E-value=1.7e-27 Score=201.97 Aligned_cols=170 Identities=14% Similarity=0.037 Sum_probs=133.0
Q ss_pred HHHHHHHHHhccCCCCCc--chHHHHHHHHHHHhhCCCceEecC---CCceEEEEeCCC-C-CCEEEEEEecccCCCCC-
Q 020605 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYTWPV---AKTGIVASVGSG-G-EPWFGLRAEMDALPLQE- 126 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~- 126 (324)
+++++++++|++|||+|+ +|.++++|++++|+++|++++.+. +++|+++++++. + +|+|+|+|||||||+++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~ 89 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKE 89 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGG
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcc
Confidence 688999999999999998 689999999999999999987643 567999999654 2 48999999999999864
Q ss_pred -CCCCccccc--cCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc--ccHHHHHHccCcC--Cc
Q 020605 127 -MVEWEHKSK--NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVD--KF 196 (324)
Q Consensus 127 -~~~~~~~~~--~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~~~~~~~~~~--~~ 196 (324)
|...||... +||++|||| +|++++++|.|++.|++.+.+++++|.|+|+++||.+ .|++++++++.+. ++
T Consensus 90 ~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~ 169 (198)
T 1q7l_A 90 HWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRA 169 (198)
T ss_dssp GCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCE
T ss_pred cCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCCc
Confidence 233377654 489999999 3799999999999999988778999999999999954 6999998865322 34
Q ss_pred ceEEEeccCCCCCCceEEeecccccceeeEEE
Q 020605 197 QGMFGIHISPVLPTGTVGSRPGPLLAGSGRFT 228 (324)
Q Consensus 197 d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~ 228 (324)
|+++ +.+.++|++...... .++|..|++
T Consensus 170 ~~~i--d~g~~ept~~~~v~~--~~kG~~~~~ 197 (198)
T 1q7l_A 170 GFAL--DEGIANPTDAFTVFY--SERSPWWVR 197 (198)
T ss_dssp EEEE--ECCCCCSSSSEEEEE--CCSSCGGGC
T ss_pred CEEE--ecCccCCCCCceEEE--EccEEEEEE
Confidence 5544 444466766432222 346766654
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.94 E-value=4.3e-26 Score=202.38 Aligned_cols=152 Identities=18% Similarity=0.274 Sum_probs=128.5
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC--CCceEEEEeCCCCCCEEEEEEecccCCCCCCCCC-
Q 020605 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV--AKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW- 130 (324)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~- 130 (324)
.+++++++++|++|||+|++|.++++||.++|+++|++++... .++|++++++ .++|+|+|+|||||||+++.+.|
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeC-CCCCEEEEEeeecccCCCCccccc
Confidence 4789999999999999999999999999999999999987632 4679999984 34689999999999999876566
Q ss_pred --cccc-ccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCcc--cHHHHHHcc--CcCCcceEE
Q 020605 131 --EHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYG--GAYYMIKEG--AVDKFQGMF 200 (324)
Q Consensus 131 --~~~~-~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~--G~~~~~~~~--~~~~~d~~i 200 (324)
||.. .++|++||||+ |+++++++.|++.|++.+.+++++|.|+|+++||.+. |++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 6764 46899999993 7999999999999998877788999999999999654 999888642 123689999
Q ss_pred EeccCC
Q 020605 201 GIHISP 206 (324)
Q Consensus 201 ~~~~~~ 206 (324)
+.|++.
T Consensus 164 ~~Ept~ 169 (269)
T 4h2k_A 164 VGEPSS 169 (269)
T ss_dssp ECCCCB
T ss_pred EECCCC
Confidence 988654
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.94 E-value=3.5e-26 Score=202.88 Aligned_cols=151 Identities=16% Similarity=0.206 Sum_probs=127.1
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec--CCCceEEEEeCCCCCCEEEEEEecccCCCCCCCCC--
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW-- 130 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~-- 130 (324)
+++++++++|++|||+|++|.++++||.++|+++|++++.. ..++|++++++ .++|+|+|+|||||||+++.+.|
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRG-TQSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEEC-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeC-CCCCeEEEEccccccCCCCcccCCC
Confidence 78999999999999999999999999999999999988753 34679999984 34689999999999999876667
Q ss_pred -cccc-ccCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCcc--cHHHHHHcc--CcCCcceEEE
Q 020605 131 -EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYG--GAYYMIKEG--AVDKFQGMFG 201 (324)
Q Consensus 131 -~~~~-~~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~--G~~~~~~~~--~~~~~d~~i~ 201 (324)
||.. .++|++|||| +|+++++++.|++.|++.+.+++++|.|+|+++||.+. |++.+++.. ...++|++++
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 6763 5699999999 37999999999999998877788999999999999654 999888742 1236899999
Q ss_pred eccCC
Q 020605 202 IHISP 206 (324)
Q Consensus 202 ~~~~~ 206 (324)
.|++.
T Consensus 165 ~ept~ 169 (268)
T 3t68_A 165 GEPSS 169 (268)
T ss_dssp CSCCB
T ss_pred eCCCC
Confidence 87653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=7.5e-21 Score=174.18 Aligned_cols=161 Identities=12% Similarity=0.094 Sum_probs=121.2
Q ss_pred HHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-CCCEEEEEEecccCC---------------
Q 020605 60 IRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALP--------------- 123 (324)
Q Consensus 60 ~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp--------------- 123 (324)
++++|+++||+|++|.++++|+.++|+++|++++.+..+ |+++.+++. ++|+|+|.|||||||
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~g-nlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDVLG-NLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECTTS-CEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeCCC-cEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 478999999999999999999999999999999876544 799998654 348999999999999
Q ss_pred -CCCCCCCcccc------------------------------------------------cc-C-------------Cce
Q 020605 124 -LQEMVEWEHKS------------------------------------------------KN-N-------------GKM 140 (324)
Q Consensus 124 -~~~~~~~~~~~------------------------------------------------~~-~-------------g~~ 140 (324)
.+.+...||.. .. + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 34332223322 11 4 899
Q ss_pred eecc--chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCC-cccHHHHHHccCcCCcceEEEeccCCCCCCceEEeec
Q 020605 141 HGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRP 217 (324)
Q Consensus 141 ~grG--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 217 (324)
|||. +|++++++|.+++.++ +++++|.|+|+++||. +.|++.+.+. . .+|++++.|++..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~-~--~~~~~i~~d~~~~---------- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ-L--KPTCAIVVETTTA---------- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH-H--CCSEEEEEEEEEE----------
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc-c--CCCEEEEEecccC----------
Confidence 9996 4799999999999886 3779999999999994 4688888763 2 5788888774210
Q ss_pred ccccceeeEEEEEEEecCCCCCCCCCCCCHHH
Q 020605 218 GPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVL 249 (324)
Q Consensus 218 g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~ 249 (324)
+ ++.|+++|++.|+.|.||+.
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i 245 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAI 245 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEE
T ss_pred -----C------CCCCCccccCCcccCCCcEE
Confidence 0 34567788878877777543
No 32
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.80 E-value=2.6e-19 Score=164.50 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=114.6
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-CCCEEEEEEecccC-----------
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDAL----------- 122 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtV----------- 122 (324)
+++++++++|++|||+|++|.++++|+.++|+++|++++.+. ..|+++++++. .+|+|+|+||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNN-KGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEECS-SSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEec-CCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 789999999999999999999999999999999999988764 44799999664 34899999999999
Q ss_pred -----CCCCCCCCccc----------------------------------------------------------------
Q 020605 123 -----PLQEMVEWEHK---------------------------------------------------------------- 133 (324)
Q Consensus 123 -----p~~~~~~~~~~---------------------------------------------------------------- 133 (324)
|.+.+...++.
T Consensus 85 ~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd 164 (349)
T 2gre_A 85 RLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGD 164 (349)
T ss_dssp CEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTC
T ss_pred eEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCC
Confidence 44432211110
Q ss_pred ---------cccCCceeecc--chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEE
Q 020605 134 ---------SKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFG 201 (324)
Q Consensus 134 ---------~~~~g~~~grG--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~ 201 (324)
...+|++|||+ +|++++++|.+++.+++.+.+++++|.|+|+++||.| .|++.+ . ..+|++++
T Consensus 165 ~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~---~--~~~~~~i~ 239 (349)
T 2gre_A 165 FVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI---P--EETVEYLA 239 (349)
T ss_dssp EEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC---C--TTEEEEEE
T ss_pred EEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc---c--cCCCEEEE
Confidence 00257899987 4799999999999999887778899999999999954 677655 1 25789999
Q ss_pred eccCC
Q 020605 202 IHISP 206 (324)
Q Consensus 202 ~~~~~ 206 (324)
+|+..
T Consensus 240 ~D~~~ 244 (349)
T 2gre_A 240 VDMGA 244 (349)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 88643
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.77 E-value=6.5e-18 Score=156.52 Aligned_cols=145 Identities=15% Similarity=0.111 Sum_probs=114.9
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC-CCCEEEEEEecccCCC---------
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALPL--------- 124 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~--------- 124 (324)
+++++++++|+++||+|++|.++++|++++|+++|++++.+.. .|+++++++. .+|+|+|.|||||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRL-GSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEECTT-CCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEcCC-CcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 6789999999999999999999999999999999999887654 4799988654 4589999999999982
Q ss_pred -------CCC---------------CC-------C--cc--cc----------------------------c--------
Q 020605 125 -------QEM---------------VE-------W--EH--KS----------------------------K-------- 135 (324)
Q Consensus 125 -------~~~---------------~~-------~--~~--~~----------------------------~-------- 135 (324)
+.+ +. | |+ .. .
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 100 00 1 11 00 0
Q ss_pred --------cCCceeecc--chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEecc
Q 020605 136 --------NNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHI 204 (324)
Q Consensus 136 --------~~g~~~grG--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~ 204 (324)
++|++|||+ +|+++++++.+++.+++.+ ++++|.|+|+++||.| .|++.+... . .+|+++++|+
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~-~--~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT-I--QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc-c--CCCEEEEEec
Confidence 168999998 4799999999999998764 6799999999999954 688887542 2 5789998886
Q ss_pred C
Q 020605 205 S 205 (324)
Q Consensus 205 ~ 205 (324)
+
T Consensus 241 ~ 241 (373)
T 1vhe_A 241 G 241 (373)
T ss_dssp E
T ss_pred c
Confidence 4
No 34
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.75 E-value=3.2e-18 Score=152.71 Aligned_cols=136 Identities=13% Similarity=0.108 Sum_probs=111.2
Q ss_pred HHHHHHHHHhccCCCCCc--------chHHHHHHHHHHHhhCCCceEecCC------CceEEEEeCCC-CCCEEEEEEec
Q 020605 55 EWMRRIRRRIHENPELGF--------EEYETSQLVRSELDSLGIEYTWPVA------KTGIVASVGSG-GEPWFGLRAEM 119 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nvia~~~~~-~~~~i~l~~H~ 119 (324)
+++++.+++|++|||+++ .|.++++||+++|+++|++++.+.. ++|+++++++. ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 788999999999999886 6889999999999999999876432 56999999765 45899999999
Q ss_pred ccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccC---cCC
Q 020605 120 DALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGA---VDK 195 (324)
Q Consensus 120 DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~---~~~ 195 (324)
|+||.+. | ..++|++++++|++++.|++.+.+++++|.|+|+++||.| .|++.++++.. ..+
T Consensus 87 D~v~~g~-----------G---a~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~ 152 (284)
T 1tkj_A 87 DSVSSGA-----------G---INDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRSK 152 (284)
T ss_dssp CCCTTSC-----------C---TTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHTT
T ss_pred CCCCCCC-----------C---CccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccchhhc
Confidence 9998631 1 0124789999999999999887778999999999999954 69999987632 134
Q ss_pred cceEEEecc
Q 020605 196 FQGMFGIHI 204 (324)
Q Consensus 196 ~d~~i~~~~ 204 (324)
+++++.+|.
T Consensus 153 ~~~~i~~D~ 161 (284)
T 1tkj_A 153 LAGYLNFDM 161 (284)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 677887774
No 35
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.75 E-value=7.1e-18 Score=153.84 Aligned_cols=142 Identities=20% Similarity=0.223 Sum_probs=113.0
Q ss_pred HHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCC-------------
Q 020605 57 MRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP------------- 123 (324)
Q Consensus 57 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp------------- 123 (324)
+++++++|+++||+|++|.++++|++++|+++|+ ++.+ ...|++++++++ +|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~d-~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKVD-AIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEEC-TTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEEc-CCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6788999999999999999999999999999999 7754 456799998664 58999999999994
Q ss_pred ---CCCCCC--C-----------------------------------------------------------------ccc
Q 020605 124 ---LQEMVE--W-----------------------------------------------------------------EHK 133 (324)
Q Consensus 124 ---~~~~~~--~-----------------------------------------------------------------~~~ 133 (324)
.+.+.. | ||.
T Consensus 81 ~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~ 160 (332)
T 2wyr_A 81 FRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFS 160 (332)
T ss_dssp EEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCE
T ss_pred EEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccE
Confidence 443210 0 111
Q ss_pred cccCCceeecc--chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCC-cccHHHHHHccCcCCcceEEEeccCC
Q 020605 134 SKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISP 206 (324)
Q Consensus 134 ~~~~g~~~grG--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~~G~~~~~~~~~~~~~d~~i~~~~~~ 206 (324)
...+|++|||. +|+++++++.+++.+++.+ ++++|.|+|+++||. +.|++.+.+. + .+|++++.|++.
T Consensus 161 ~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~ 231 (332)
T 2wyr_A 161 VLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDSFA 231 (332)
T ss_dssp EETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECCEE
T ss_pred EecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEeccc
Confidence 22478999996 4799999999999998765 679999999999994 4688888652 2 579999988643
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.72 E-value=4.9e-17 Score=146.12 Aligned_cols=141 Identities=11% Similarity=0.114 Sum_probs=111.6
Q ss_pred HHHHHHHHHhccCCC---CCcchHHHHHHHHHHHhhCC--Cc-eEecC------CCceEEEEeCCC--CCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHENPE---LGFEEYETSQLVRSELDSLG--IE-YTWPV------AKTGIVASVGSG--GEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~ips---~s~~e~~~~~~l~~~l~~~G--~~-~~~~~------~~~nvia~~~~~--~~~~i~l~~H~D 120 (324)
+++++++++|+++|+ .++.|.++++||.++|+++| ++ ++.+. ...|+++++++. +++.|+|.||+|
T Consensus 20 ~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D 99 (299)
T 1rtq_A 20 SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLD 99 (299)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccc
Confidence 889999999999984 46678899999999999986 33 33321 247999999764 247899999999
Q ss_pred cCCCCCCCCCccccccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccC--cC
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGA--VD 194 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~--~~ 194 (324)
|||. .|+ ++++||+|. |++++++|++++.|++.+.+++++|.|+|+++||.| .|++++++... ..
T Consensus 100 ~v~~----~~~-----~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~ 170 (299)
T 1rtq_A 100 STIG----SHT-----NEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQYKSEGK 170 (299)
T ss_dssp CCSS----TTC-----CTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHHTTC
T ss_pred cCCC----cCc-----CCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHhhhhccc
Confidence 9983 354 367899994 789999999999999887788999999999999954 69998887532 12
Q ss_pred CcceEEEecc
Q 020605 195 KFQGMFGIHI 204 (324)
Q Consensus 195 ~~d~~i~~~~ 204 (324)
++++++.+|.
T Consensus 171 ~~~~~i~~D~ 180 (299)
T 1rtq_A 171 NVVSALQLDM 180 (299)
T ss_dssp EEEEEEECSC
T ss_pred cEEEEEEecC
Confidence 4567777664
No 37
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.69 E-value=8e-16 Score=138.45 Aligned_cols=144 Identities=15% Similarity=0.075 Sum_probs=111.4
Q ss_pred HHHHHHHHHhccC---CCCCcchHHHHHHHHHHHhhCCCceEecC-------C----CceEEEEeCCCCCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHEN---PELGFEEYETSQLVRSELDSLGIEYTWPV-------A----KTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~i---ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvia~~~~~~~~~i~l~~H~D 120 (324)
+++.+.+++|+++ +..|..+.++++||.++|+++|++++.+. + ..||+|++++.+.+.|++.||+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 6677777777654 33466788999999999999999987632 1 37999999876568999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC-Cc-------------cc
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GY-------------GG 183 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~-------------~G 183 (324)
+||.++. .|+. ..+|++| +|. ++|+|++|++++.|++.+ ++++|.|+|+++|| +. .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997643 3443 3467777 663 579999999999999875 88999999999999 45 69
Q ss_pred HHHHHHccCc--CCcceEEEecc
Q 020605 184 AYYMIKEGAV--DKFQGMFGIHI 204 (324)
Q Consensus 184 ~~~~~~~~~~--~~~d~~i~~~~ 204 (324)
++++++.... ..+.+++.+|.
T Consensus 179 S~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 179 TQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp HHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHHhCCCccccceEEEEEecc
Confidence 9999986432 24566777663
No 38
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.68 E-value=2.3e-16 Score=145.01 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=110.0
Q ss_pred HHHHHHHhccCCCCCcch-HHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCC------------
Q 020605 57 MRRIRRRIHENPELGFEE-YETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP------------ 123 (324)
Q Consensus 57 ~~~~~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp------------ 123 (324)
+++++++|+++||+|++| .+++++++++|+++|++++.+. ..|+++.++++ +|+++|.||+|||+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDK-LGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEECT-TCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEcC-CCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578899999999999999 9999999999999999988754 45799998665 58999999999995
Q ss_pred ----CCCCCCCc------------------------c-------------------------------------------
Q 020605 124 ----LQEMVEWE------------------------H------------------------------------------- 132 (324)
Q Consensus 124 ----~~~~~~~~------------------------~------------------------------------------- 132 (324)
.+.+...+ .
T Consensus 86 ~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~ 165 (353)
T 1y0y_A 86 RVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWD 165 (353)
T ss_dssp EEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEec
Confidence 33211000 0
Q ss_pred ---ccccCCceeecc--chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEeccCC
Q 020605 133 ---KSKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISP 206 (324)
Q Consensus 133 ---~~~~~g~~~grG--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~~~ 206 (324)
....++++|||. +|+++++++.+++.+++ +++++.|+|+++||.| .|++.+... . .+|+++++|++.
T Consensus 166 ~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~-~--~~~~~i~~d~~~ 238 (353)
T 1y0y_A 166 GRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG-I--EPDYGFAIDVTI 238 (353)
T ss_dssp CCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEEEEE
T ss_pred cCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc-c--CCCEEEEEeccc
Confidence 000146788886 47999999999998865 6789999999999954 688888642 2 578999988643
No 39
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.65 E-value=2.8e-15 Score=135.01 Aligned_cols=144 Identities=15% Similarity=0.121 Sum_probs=102.4
Q ss_pred HHHHHHHHHhccCCCC---CcchHHHHHHHHHHHhhCCCceEecC-------C----CceEEEEeCCCCCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHENPEL---GFEEYETSQLVRSELDSLGIEYTWPV-------A----KTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~---s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvia~~~~~~~~~i~l~~H~D 120 (324)
+++.+.+++|+++++. |..+.++++||.++|+++|++++.+. + ..||+|++++.+.+.|+|.||+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 7888888888887632 45678999999999999999987532 1 37999999876568999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC-Cc--------------c
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GY--------------G 182 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~--------------~ 182 (324)
+||.++. .|+. ..++. +++|. ++++|++|++++.|.+.+ ++++|.|+|+++|| +. .
T Consensus 107 sv~~~~~--~p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADN--DPDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCC--Cccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 9997642 2332 22333 44673 689999999999999874 88999999999999 44 6
Q ss_pred cHHHHHHccCc--CCcceEEEecc
Q 020605 183 GAYYMIKEGAV--DKFQGMFGIHI 204 (324)
Q Consensus 183 G~~~~~~~~~~--~~~d~~i~~~~ 204 (324)
|++++++.... ..+.+++.+|.
T Consensus 181 GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 181 GSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp HHHHHHHSCSSTTCCCSEEEEEES
T ss_pred hHHHHHhCCcccccceeEEEEEec
Confidence 99999986432 24566777663
No 40
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.63 E-value=4.6e-15 Score=135.99 Aligned_cols=142 Identities=15% Similarity=0.138 Sum_probs=108.6
Q ss_pred HHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCC---------------
Q 020605 59 RIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP--------------- 123 (324)
Q Consensus 59 ~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp--------------- 123 (324)
+++++|+++||+|++|.++++|+.++|+++|++++.+..+ |+++++++.+.|+|+|.||+|||+
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d~~g-nlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGLG-SVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEECTTC-CEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEecCC-CEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 6799999999999999999999999999999998876544 799998654458999999999995
Q ss_pred -CCCCC--CC----------------------------------------------------------ccccccCCceee
Q 020605 124 -LQEMV--EW----------------------------------------------------------EHKSKNNGKMHG 142 (324)
Q Consensus 124 -~~~~~--~~----------------------------------------------------------~~~~~~~g~~~g 142 (324)
.+.+. .| +|....+|++||
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 11110 00 000114678999
Q ss_pred ccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEeccCC
Q 020605 143 CGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISP 206 (324)
Q Consensus 143 rG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~~~ 206 (324)
++. ++++++++.+++.+++.+ ++.++.++|+.+||.+ .|+...... . ..|+++.+|...
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D~~~ 227 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDTAC 227 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH-H--CCSEEEEECCCC
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc-c--CCCEEEEEeccc
Confidence 884 689999999999987653 6689999999999954 577655432 2 468888888644
No 41
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.61 E-value=8.7e-15 Score=134.11 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=108.5
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCC-----------
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP----------- 123 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp----------- 123 (324)
.++++++++|+++||+|++|.++++|++++|+++|++++.+..+ |+++.+++.+.|.|+|.||+|||+
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~g-nlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTTRHG-SLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEECTTS-CEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEecCC-cEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 45688999999999999999999999999999999998876544 799998654448999999999995
Q ss_pred ----CCCCCCCcc----------c----c------------------------------------------------ccC
Q 020605 124 ----LQEMVEWEH----------K----S------------------------------------------------KNN 137 (324)
Q Consensus 124 ----~~~~~~~~~----------~----~------------------------------------------------~~~ 137 (324)
.+.+...+. . . ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 322111000 0 0 002
Q ss_pred Cceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEeccCC
Q 020605 138 GKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISP 206 (324)
Q Consensus 138 g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~~~ 206 (324)
|+++|++. +.++++++.+++.+++.+ +++++.++|+.+||.+ .|+..... . + ..|+++.+|...
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~-~-i-~~~~~i~~D~~~ 230 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY-E-I-NPDAAIVMDVTF 230 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC-C-C-CCSEEEEEEEEC
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc-c-c-CCCEEEEeeccc
Confidence 56888874 678999999999987654 6689999999999955 56665432 1 2 568888887543
No 42
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.61 E-value=1.6e-18 Score=156.94 Aligned_cols=186 Identities=16% Similarity=0.048 Sum_probs=108.7
Q ss_pred HHHHHHhccCCCCCcchH-HHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCCCCCCCCCcccccc
Q 020605 58 RRIRRRIHENPELGFEEY-ETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKN 136 (324)
Q Consensus 58 ~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~~~~~~~ 136 (324)
++++++|+++||+|++|. ++++||+++|+++|+++++|..+ |++|+++++ +|+|+|.|||||||..... ...
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D~~G-Nlia~~~g~-~p~lll~~H~Dtvp~~v~~-----~~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLG-NVIAHFKGS-SPRIMVAAHMDKIGVMVNH-----IDK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEECTTC-CEEEEECCS-SSEEEEEEECCBCEEEEEE-----ECT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEeCCC-eEEEEECCC-CceEEEEeccccCCCcCCe-----eec
Confidence 478999999999999885 68999999999999999987655 799999875 4999999999999864221 123
Q ss_pred CCceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEeccCCCCCCceE
Q 020605 137 NGKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTV 213 (324)
Q Consensus 137 ~g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 213 (324)
+|.+++++. +.+.++...++..+...+ .+...+.++++.+||.+ .+.+.+..........+..... ....+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEE---AEEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHHH---HHHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchhh---hhcccc-
Confidence 677776652 222222222222233322 35567788888999954 4555554432211111111000 000011
Q ss_pred EeecccccceeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020605 214 GSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ 259 (324)
Q Consensus 214 ~~~~g~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~l~~~l~~l~ 259 (324)
. ....+.......+.+...|++.+..+.+++..+...+.++.
T Consensus 160 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 201 (354)
T 2wzn_A 160 --R--VGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLG 201 (354)
T ss_dssp --C--TTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCC
T ss_pred --c--cceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHH
Confidence 0 01123444556667777777766655566665555555543
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.59 E-value=1.1e-14 Score=132.53 Aligned_cols=126 Identities=15% Similarity=0.208 Sum_probs=98.9
Q ss_pred HHH-HHHHHHhccCCCC-CcchHHHHHHHHHHHhh--CCCceEecC----------CCceEEEEeCCCCCCEEEEEEecc
Q 020605 55 EWM-RRIRRRIHENPEL-GFEEYETSQLVRSELDS--LGIEYTWPV----------AKTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~-~~~~~~l~~ips~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nvia~~~~~~~~~i~l~~H~D 120 (324)
+++ .+.+++|+..+.+ +..+.++++||.++|++ +|++++.+. ...||+|++++.+.+.|++.||+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 778 8889999755544 34456889999999999 999887632 147999999876568999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccc---hHHHHHHHHHHHHHHhc--------CCCCCceEEEEEeccCCC--------c
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGH---DVHTTILLGAARLLKHR--------MDRLKGTVKLVFQPGEEG--------Y 181 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~---kg~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~dEE~--------~ 181 (324)
+||.+ .|+ |++ ++|. ++|+|++|++++.|.+. +.+++++|.|+|+.+||. +
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 342 454 6773 68999999999999875 246889999999999996 4
Q ss_pred -ccHHHHHHc
Q 020605 182 -GGAYYMIKE 190 (324)
Q Consensus 182 -~G~~~~~~~ 190 (324)
.|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 499988875
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.58 E-value=2.3e-15 Score=136.51 Aligned_cols=143 Identities=13% Similarity=0.024 Sum_probs=105.9
Q ss_pred cCcchHHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC----C--CceEEEEeCCCCCCEEEEEEecccC
Q 020605 49 REPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV----A--KTGIVASVGSGGEPWFGLRAEMDAL 122 (324)
Q Consensus 49 ~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~----~--~~nvia~~~~~~~~~i~l~~H~DtV 122 (324)
++.. +++++++++|+++||+|++|.++++|++++|+++|++++.+. . ..|+++.+++ . |+++|.||||||
T Consensus 13 ~~~~--~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV 88 (321)
T 3cpx_A 13 ENLY--FQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSI 88 (321)
T ss_dssp CGGG--CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBC
T ss_pred hhHH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcC
Confidence 4444 889999999999999999999999999999999999877655 1 3579998865 4 889999999999
Q ss_pred C-----------CCCCCCCc---cccc---------------------------------------cCCceeecc--chH
Q 020605 123 P-----------LQEMVEWE---HKSK---------------------------------------NNGKMHGCG--HDV 147 (324)
Q Consensus 123 p-----------~~~~~~~~---~~~~---------------------------------------~~g~~~grG--~kg 147 (324)
+ .+.+..|+ +... .+|+++|++ +|+
T Consensus 89 ~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~ 168 (321)
T 3cpx_A 89 GFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRL 168 (321)
T ss_dssp EEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHH
T ss_pred CeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHH
Confidence 4 33222221 0000 026788887 478
Q ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHH---HccCcCCcceEEEeccC
Q 020605 148 HTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMI---KEGAVDKFQGMFGIHIS 205 (324)
Q Consensus 148 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~---~~~~~~~~d~~i~~~~~ 205 (324)
++++++.+++.++ . +.++|+.+||.| .|++... .... ..|+++++|+.
T Consensus 169 G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~~ 220 (321)
T 3cpx_A 169 GVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDIT 220 (321)
T ss_dssp HHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCCE
T ss_pred HHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeCc
Confidence 9999999988654 1 899999999954 5766432 2222 57889988764
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.43 E-value=2.9e-12 Score=117.19 Aligned_cols=146 Identities=16% Similarity=0.099 Sum_probs=108.2
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCC--CCCEEEEEEecccCCC-----CCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDALPL-----QEM 127 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~-----~~~ 127 (324)
.++++++++|+++||+|++|.++++|++++|+++|++++.+..+ |+++++++. ++|+|+|.||||+|+. .+.
T Consensus 3 ~~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D~~G-Nli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~ 81 (355)
T 3kl9_A 3 TTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLG-GIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPD 81 (355)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEECTTS-CEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEECCCC-eEEEEECCcCCCCCeEEEEeccccccceEEEECCC
Confidence 36789999999999999999999999999999999999876545 799999764 4699999999998874 110
Q ss_pred --------CCCc------------------c-------------------------------------------------
Q 020605 128 --------VEWE------------------H------------------------------------------------- 132 (324)
Q Consensus 128 --------~~~~------------------~------------------------------------------------- 132 (324)
..|. +
T Consensus 82 G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v 161 (355)
T 3kl9_A 82 GTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTI 161 (355)
T ss_dssp SCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEE
T ss_pred CEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEE
Confidence 1121 0
Q ss_pred --cc----c-cCCceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEe
Q 020605 133 --KS----K-NNGKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGI 202 (324)
Q Consensus 133 --~~----~-~~g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~ 202 (324)
+. . .++++.++.- +.++++++.+++.+++. .++.+++++|+..||.| .|+...... . .+|.+|++
T Consensus 162 ~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~ 236 (355)
T 3kl9_A 162 VPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAV 236 (355)
T ss_dssp EECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEE
T ss_pred EeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEe
Confidence 00 0 0124555552 47888899999988754 47899999999999955 566554443 2 47888888
Q ss_pred ccCC
Q 020605 203 HISP 206 (324)
Q Consensus 203 ~~~~ 206 (324)
|...
T Consensus 237 D~~~ 240 (355)
T 3kl9_A 237 DCSP 240 (355)
T ss_dssp EEEE
T ss_pred cCcc
Confidence 8643
No 46
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=7.3e-12 Score=112.80 Aligned_cols=145 Identities=16% Similarity=0.144 Sum_probs=103.5
Q ss_pred HHHHHHHHHhccC-CC--CCcchHHHHHHHHHHHhhCCCceEec-------C----CCceEEEEeCCCCCCEEEEEEecc
Q 020605 55 EWMRRIRRRIHEN-PE--LGFEEYETSQLVRSELDSLGIEYTWP-------V----AKTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~~~~~l~~i-ps--~s~~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nvia~~~~~~~~~i~l~~H~D 120 (324)
+++.+.++.++++ |. -|....++++||.+.|+++|++++.+ . ...|||+++++...+.|++.+|||
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6777777777764 33 34455789999999999999998652 1 125899999887668999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccch-HHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc---------------ccH
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---------------GGA 184 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~k-g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~---------------~G~ 184 (324)
++|.++....+. ..+...-|..++ +|+|++|++++.|.+. +++++|.|+|..+||.| .|+
T Consensus 105 s~~~~~~~~~~~--~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS 180 (309)
T 4fuu_A 105 TRPWADNDADEK--NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGS 180 (309)
T ss_dssp CCSCCTTCSSGG--GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHH
T ss_pred CCCCCCCccccc--cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcch
Confidence 998754322111 001112233344 5899999999999875 47899999999999955 488
Q ss_pred HHHHHccCc--CCcceEEEec
Q 020605 185 YYMIKEGAV--DKFQGMFGIH 203 (324)
Q Consensus 185 ~~~~~~~~~--~~~d~~i~~~ 203 (324)
+++++.... ..+.+++.++
T Consensus 181 ~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 181 QYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp HHHHHSCSSTTCCCSEEEEEC
T ss_pred hHHHhcccccCcceEEEEeee
Confidence 888876432 2456677666
No 47
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.41 E-value=4.7e-12 Score=114.99 Aligned_cols=138 Identities=20% Similarity=0.289 Sum_probs=102.0
Q ss_pred HHHHHHHHHhccCCCCCc--chHHHHHHHHHHHhhCCCceEecC-----------CCceEEEEeCCCCCCEEEEEEeccc
Q 020605 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYTWPV-----------AKTGIVASVGSGGEPWFGLRAEMDA 121 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~i~l~~H~Dt 121 (324)
..+-++++.++ +|.+.+ ...++++||.+.|+++|++++.+. ...||||+++++....|++.||+|+
T Consensus 38 ~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs 116 (330)
T 4fai_A 38 LHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCC
T ss_pred HHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecc
Confidence 67777777764 565544 457889999999999999987521 1259999998775578999999999
Q ss_pred CCCCCCCCCccccccCCceeeccch-HHHHHHHHHHHHHHhc---CCCCCceEEEEEeccCCCc---------ccHHHHH
Q 020605 122 LPLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHR---MDRLKGTVKLVFQPGEEGY---------GGAYYMI 188 (324)
Q Consensus 122 Vp~~~~~~~~~~~~~~g~~~grG~k-g~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~dEE~~---------~G~~~~~ 188 (324)
++..+ ....|..++ +|+|++|++++.|.+. +.+++++|.|+|..+||.| .|+++++
T Consensus 117 ~~~~~-----------~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a 185 (330)
T 4fai_A 117 KYMPG-----------VEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLA 185 (330)
T ss_dssp CCCTT-----------SCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHH
T ss_pred ccccc-----------CCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHH
Confidence 97532 111233334 5899999999998753 4568899999999999955 3999998
Q ss_pred Hc----cCcCCcceEEEecc
Q 020605 189 KE----GAVDKFQGMFGIHI 204 (324)
Q Consensus 189 ~~----~~~~~~d~~i~~~~ 204 (324)
+. +..+++.+++.+|.
T Consensus 186 ~~~~~~~~~~~i~~~inlDm 205 (330)
T 4fai_A 186 KKWHHEGKLDRIDMLVLLDL 205 (330)
T ss_dssp HHHHHTTCSTTEEEEEEECS
T ss_pred hcchhccchhceeEEEEecc
Confidence 74 23345677777763
No 48
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.38 E-value=2.3e-12 Score=116.52 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=99.3
Q ss_pred HHHHH-HHHHh-ccCCCCCcchHHHHHHHHHHHhhC--CCceEecCC----------CceEEEEeCCCCCCEEEEEEecc
Q 020605 55 EWMRR-IRRRI-HENPELGFEEYETSQLVRSELDSL--GIEYTWPVA----------KTGIVASVGSGGEPWFGLRAEMD 120 (324)
Q Consensus 55 ~~~~~-~~~~l-~~ips~s~~e~~~~~~l~~~l~~~--G~~~~~~~~----------~~nvia~~~~~~~~~i~l~~H~D 120 (324)
+++.+ .++.+ ......|..+.++++||.++|+++ |++++.+.. ..||||++++...+.|++.+|+|
T Consensus 39 ~~~~~~~L~~~~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~D 118 (330)
T 3pb6_X 39 QRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYD 118 (330)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEeccC
Confidence 55554 45554 333444556778999999999999 888876421 26999999876558999999999
Q ss_pred cCCCCCCCCCccccccCCceeeccc-hHHHHHHHHHHHHHHhc-----CCCCCceEEEEEeccCCC--------c-ccHH
Q 020605 121 ALPLQEMVEWEHKSKNNGKMHGCGH-DVHTTILLGAARLLKHR-----MDRLKGTVKLVFQPGEEG--------Y-GGAY 185 (324)
Q Consensus 121 tVp~~~~~~~~~~~~~~g~~~grG~-kg~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEE~--------~-~G~~ 185 (324)
+||..+. +....|..+ .+|+|++|++++.|.+. +.+++++|.|+|..+||. + .|++
T Consensus 119 sv~~~~g---------~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~ 189 (330)
T 3pb6_X 119 SKLFPPG---------STPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSR 189 (330)
T ss_dssp CCCCCTT---------SCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHH
T ss_pred CCCCCCC---------CcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHH
Confidence 9974211 011223333 36899999999999873 346899999999999997 5 4999
Q ss_pred HHHHcc----------CcCCcceEEEec
Q 020605 186 YMIKEG----------AVDKFQGMFGIH 203 (324)
Q Consensus 186 ~~~~~~----------~~~~~d~~i~~~ 203 (324)
++++.- ..+++++++.+|
T Consensus 190 ~~a~~~~~~~~~~~~~~~~~i~~~inlD 217 (330)
T 3pb6_X 190 HLAQLMESIPHSPGPTRIQAIELFMLLD 217 (330)
T ss_dssp HHHHHHHHSBCSSCSBTTTTEEEEEEEE
T ss_pred HHHHHHHhcCCccccchhhCeEEEEecc
Confidence 888641 123456666666
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.38 E-value=6.1e-12 Score=113.49 Aligned_cols=125 Identities=18% Similarity=0.249 Sum_probs=93.9
Q ss_pred HHHHHHHHHhccCCCCCc--chHHHHHHHHHHHhhCCCceEecC-----------CCceEEEEeCCCCCCEEEEEEeccc
Q 020605 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYTWPV-----------AKTGIVASVGSGGEPWFGLRAEMDA 121 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~i~l~~H~Dt 121 (324)
..+-++++.++ +|.+.+ ...++++||++.|+++|++++.+. ...||||++++...+.|++.+|+|+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEec
Confidence 55666666664 565544 457899999999999999986521 1259999998876689999999999
Q ss_pred CCCCCCCCCccccccCCceeeccch-HHHHHHHHHHHHHHhc-----CCCCCceEEEEEeccCCCc---------ccHHH
Q 020605 122 LPLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHR-----MDRLKGTVKLVFQPGEEGY---------GGAYY 186 (324)
Q Consensus 122 Vp~~~~~~~~~~~~~~g~~~grG~k-g~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEE~~---------~G~~~ 186 (324)
++.++. ....|..++ +|+|++|++++.|.+. +.+++++|.|+|..+||.| .|+++
T Consensus 90 ~~~~~~----------~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~ 159 (312)
T 4f9u_A 90 KYFPND----------PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKH 159 (312)
T ss_dssp CCCTTC----------TTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHH
T ss_pred CCCCCC----------CCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHH
Confidence 975421 112344444 5899999999999753 4468899999999999954 49999
Q ss_pred HHHc
Q 020605 187 MIKE 190 (324)
Q Consensus 187 ~~~~ 190 (324)
++++
T Consensus 160 ~a~~ 163 (312)
T 4f9u_A 160 LAAK 163 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 50
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.31 E-value=1.4e-11 Score=112.60 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=59.7
Q ss_pred HHHHHHHHhccCCCCCcchH-HHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCCC
Q 020605 56 WMRRIRRRIHENPELGFEEY-ETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL 124 (324)
Q Consensus 56 ~~~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~ 124 (324)
.+++++++|+++||+|+.|. ++++|++++|+++|++++.+..+ |+++++++.+ |+|+|.||||+|+.
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D~~G-Nvi~~~~g~~-~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLG-NVIAHFKGSS-PRIMVAAHMDKIGV 77 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEECTTC-CEEEEECCSS-SEEEEECCCCBCEE
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEcCCC-eEEEEEcCCC-CEEEEEecccccce
Confidence 46788999999999999999 99999999999999999876544 7999997654 99999999998874
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.19 E-value=1.3e-10 Score=105.51 Aligned_cols=140 Identities=19% Similarity=0.122 Sum_probs=100.5
Q ss_pred HHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecCCCceEEEEeCCCCCCEEEEEEecccCCC-----CCC---
Q 020605 56 WMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL-----QEM--- 127 (324)
Q Consensus 56 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~-----~~~--- 127 (324)
.+-+++++|+++|++|+.|.+++++++++++++|.+++.|..+ |+++++++ ++|+|+|.||||+|.. .+.
T Consensus 12 ~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D~~G-nvi~~~g~-~~~~v~l~aHmDevG~mV~~I~~~G~l 89 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGLG-NLIVWKGS-GEKKVILDAHIDEIGVVVTNVDDKGFL 89 (343)
T ss_dssp CCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEECTTC-CEEEEECC-CSSEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEECCCC-CEEEEECC-CCCEEEEEecccccceEEEEECCCCeE
Confidence 3456789999999999999999999999999999999877666 69998854 4699999999998864 110
Q ss_pred -----CCCc-----------------------------------------c-----cc-------cc-------------
Q 020605 128 -----VEWE-----------------------------------------H-----KS-------KN------------- 136 (324)
Q Consensus 128 -----~~~~-----------------------------------------~-----~~-------~~------------- 136 (324)
..|. | .. ..
T Consensus 90 ~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~ 169 (343)
T 3isx_A 90 TIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVE 169 (343)
T ss_dssp EEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEE
T ss_pred EEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEE
Confidence 1221 0 00 00
Q ss_pred -CCceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccCcCCcceEEEeccC
Q 020605 137 -NGKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHIS 205 (324)
Q Consensus 137 -~g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~~~~~d~~i~~~~~ 205 (324)
++++.++.- +.++++++.+++.++. +.+++++|+..||.| .|+...... . .+|.++++|..
T Consensus 170 ~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~~Ga~~aa~~-i--~pd~~i~vDv~ 234 (343)
T 3isx_A 170 VSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGLVGASVAGYG-V--PADEAIAIDVT 234 (343)
T ss_dssp ETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTSCCSTTTGGG-C--CCSEEEEEEEE
T ss_pred eccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCchhHHHHhhc-C--CCCEEEEEeCc
Confidence 144555552 4678888888876642 579999999999955 566544332 2 47888888854
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.81 E-value=2.4e-08 Score=93.56 Aligned_cols=120 Identities=12% Similarity=0.163 Sum_probs=83.7
Q ss_pred ccCCCCCcchHHHHHHHHHHHh---h--CCCceEecC----CCceEEEEeCCC-----CCCEEEEEEecccCCCCCCCCC
Q 020605 65 HENPELGFEEYETSQLVRSELD---S--LGIEYTWPV----AKTGIVASVGSG-----GEPWFGLRAEMDALPLQEMVEW 130 (324)
Q Consensus 65 ~~ips~s~~e~~~~~~l~~~l~---~--~G~~~~~~~----~~~nvia~~~~~-----~~~~i~l~~H~DtVp~~~~~~~ 130 (324)
..||+..-. .+.+++|.++++ + .++++..+. ...|+++++++. +.+.|++.+|+|+|+.+
T Consensus 162 ~~IP~~~Is-~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g----- 235 (421)
T 2ek8_A 162 SFVAAVGIT-KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKA----- 235 (421)
T ss_dssp TCCEEEEEC-HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTC-----
T ss_pred CCccEEEeC-HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCC-----
Confidence 345554433 334677888883 2 223332221 146899999763 45899999999999853
Q ss_pred ccccccCCceeecc---chHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHccC---cCCcceEEEec
Q 020605 131 EHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGA---VDKFQGMFGIH 203 (324)
Q Consensus 131 ~~~~~~~g~~~grG---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~~---~~~~d~~i~~~ 203 (324)
+| +++|++++|++++.|++. +++++|.|+++++||.+ .|+++++++.. ..++.+++.+|
T Consensus 236 ------------~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D 301 (421)
T 2ek8_A 236 ------------PGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLD 301 (421)
T ss_dssp ------------CCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEEC
T ss_pred ------------CCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEec
Confidence 33 367999999999999874 47899999999999955 69999997632 12356677766
Q ss_pred c
Q 020605 204 I 204 (324)
Q Consensus 204 ~ 204 (324)
.
T Consensus 302 ~ 302 (421)
T 2ek8_A 302 M 302 (421)
T ss_dssp S
T ss_pred c
Confidence 4
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.72 E-value=5.8e-08 Score=91.52 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhhCC-CceEe--------cCCCceEEEEeCCCC--CCEEEEEEecccCCCCCCCCCccccccCCceeec
Q 020605 75 YETSQLVRSELDSLG-IEYTW--------PVAKTGIVASVGSGG--EPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGC 143 (324)
Q Consensus 75 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~nvia~~~~~~--~~~i~l~~H~DtVp~~~~~~~~~~~~~~g~~~gr 143 (324)
.+.++.|.+.++.-. +.++. .....|+++++++.. .+.|++.+|+|+|+.+. |.
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~---------------Ga 267 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEGT---------------GA 267 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSSC---------------CT
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCCC---------------CC
Confidence 344677777776421 32221 123469999998753 57899999999998531 11
Q ss_pred -cchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHHHHHcc
Q 020605 144 -GHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEG 191 (324)
Q Consensus 144 -G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~~~~~~ 191 (324)
++++|++++|++++.|++.+.+++++|.|+|+++||.+ .|+++++++.
T Consensus 268 ~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 268 IDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp TTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 13579999999999999988789999999999999954 7999999864
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.33 E-value=1.4e-06 Score=85.23 Aligned_cols=90 Identities=13% Similarity=0.004 Sum_probs=68.0
Q ss_pred CceEEEEeCCC--CCCEEEEEEecccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhc----CCCCCceEE
Q 020605 98 KTGIVASVGSG--GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHR----MDRLKGTVK 171 (324)
Q Consensus 98 ~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~----~~~~~~~i~ 171 (324)
..||+|++++. +.+.|++.+|+|++.+|.. +..+|++++|++++.|.+. +.+++++|.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga~----------------D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAA----------------KSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCCTT----------------TTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCCCC----------------cCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46899999876 3578999999999953210 1246899999999999864 678999999
Q ss_pred EEEeccCCCc-ccHHHHHHccCc---CCcceEEEec
Q 020605 172 LVFQPGEEGY-GGAYYMIKEGAV---DKFQGMFGIH 203 (324)
Q Consensus 172 ~~~~~dEE~~-~G~~~~~~~~~~---~~~d~~i~~~ 203 (324)
|++..+||.| .|+.+++++... +++.+.+.+|
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~~~~l~~~~~a~iNlD 365 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLD 365 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHTTTTGGGTEEEEEECT
T ss_pred EEEECCcccCchhHHHHHHhhhhhhhhCEEEEEecc
Confidence 9999999954 799999986421 2344555554
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.28 E-value=1.7e-06 Score=85.43 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=67.6
Q ss_pred CceEEEEeCCC--CCCEEEEEEecccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHh---cCCCCCceEEE
Q 020605 98 KTGIVASVGSG--GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKH---RMDRLKGTVKL 172 (324)
Q Consensus 98 ~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~---~~~~~~~~i~~ 172 (324)
-.||+|++++. +.+.|++.+|+|+++.| +.+..+|++++|++++.|.+ .+.+++++|.|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFG----------------AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSC----------------TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCC----------------CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 35899999875 35789999999999742 11224689999999999876 46689999999
Q ss_pred EEeccCCCc-ccHHHHHHccC---cCCcceEEEec
Q 020605 173 VFQPGEEGY-GGAYYMIKEGA---VDKFQGMFGIH 203 (324)
Q Consensus 173 ~~~~dEE~~-~G~~~~~~~~~---~~~~d~~i~~~ 203 (324)
++..+||.+ .|+.+++++.. .+++.+.+.+|
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~~~~~~~~~~~a~iNlD 410 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEENVKILQERSIAYINSD 410 (707)
T ss_dssp EEESCGGGTSHHHHHHHHHHHHHHHHHEEEEEECS
T ss_pred EEeCCccccchhHHHHHHhcchhhhhCEEEEEEec
Confidence 999999954 69999987532 12344555554
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=94.53 E-value=0.28 Score=44.97 Aligned_cols=85 Identities=9% Similarity=-0.017 Sum_probs=58.4
Q ss_pred CceEEEEe--CCCCCCEEEEEEecccCCCCCCCCCccccccCCceeeccchHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Q 020605 98 KTGIVASV--GSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQ 175 (324)
Q Consensus 98 ~~nvia~~--~~~~~~~i~l~~H~DtVp~~~~~~~~~~~~~~g~~~grG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 175 (324)
+..-++.+ +|...+.|++.+|+|+.... -+.-+|+|++++.++.|++. +++.++.|+|.
T Consensus 165 G~l~y~e~~ipG~t~~~IllsaH~cHP~~A-----------------NDNaSG~a~lleLar~l~~~--~~~~t~rFvf~ 225 (435)
T 3k9t_A 165 GSLTYGEYYIRGELEEEILLTTYTCHPSMC-----------------NDNLSGVALITFIAKALSKL--KTKYSYRFLFA 225 (435)
T ss_dssp CEEEEEEEEECCSSSCEEEEEEECCCCSCT-----------------TTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEE
T ss_pred CceEEEEEEecCCCCCEEEEEEEcCCCCCC-----------------CccchHHHHHHHHHHHHhcC--CCCceEEEEEc
Confidence 44556665 67656999999999983211 01135899999999999864 47899999999
Q ss_pred ccCCCcccHHHHHHccC--cCCcceEEEecc
Q 020605 176 PGEEGYGGAYYMIKEGA--VDKFQGMFGIHI 204 (324)
Q Consensus 176 ~dEE~~~G~~~~~~~~~--~~~~d~~i~~~~ 204 (324)
++ ..|+.+++.+.. .+++.+.++++.
T Consensus 226 pg---~iGS~~yl~~~~~~l~~i~a~lnLDm 253 (435)
T 3k9t_A 226 PE---TIGSITWLSRNEDKLKNIKMGLVATC 253 (435)
T ss_dssp CT---THHHHHHHHHCGGGGGGEEEEEECCS
T ss_pred Cc---cHHHHHHHHhChHhhhceEEEEEEEE
Confidence 82 258888776532 234556666653
No 57
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=89.60 E-value=7.1 Score=36.47 Aligned_cols=120 Identities=14% Similarity=-0.030 Sum_probs=71.7
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC------CCc-eEEEEeCCC-CCCEEEEEEecccCCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV------AKT-GIVASVGSG-GEPWFGLRAEMDALPLQE 126 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~-nvia~~~~~-~~~~i~l~~H~DtVp~~~ 126 (324)
-+-+.+.|+|+..|..--.....+++.++.+++.|++++..+ .+. .+++.=.++ ..|.++...+. |.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~~~ 243 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VPGS 243 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CTTC
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CCCC
Confidence 567788999999998777778889999999999999987611 121 122222222 22444433332 2111
Q ss_pred CC-------CCcccc----cc-CCceee-ccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 127 MV-------EWEHKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 127 ~~-------~~~~~~----~~-~g~~~g-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
.. +..|+. .+ .+-+.+ +.+.+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 244 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 244 TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp SCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEE
T ss_pred CCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 00 111211 00 111111 112489999999999999865 67888888877775
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=87.60 E-value=0.16 Score=47.09 Aligned_cols=61 Identities=10% Similarity=0.096 Sum_probs=41.4
Q ss_pred HHhccCCCCCcchHHHHHHHHHHHhhCCC---------------ceEecCCCceEEEEeCCCC----CCEEEEEEecccC
Q 020605 62 RRIHENPELGFEEYETSQLVRSELDSLGI---------------EYTWPVAKTGIVASVGSGG----EPWFGLRAEMDAL 122 (324)
Q Consensus 62 ~~l~~ips~s~~e~~~~~~l~~~l~~~G~---------------~~~~~~~~~nvia~~~~~~----~~~i~l~~H~DtV 122 (324)
++++.+=.-+..+..+.++++++|++.|| ++..+..+.|+++...++. .+.+++.+|+|.+
T Consensus 6 ~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 6 QGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp --CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 45555555677788888999999998888 2222333357999864432 4789999999955
No 59
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=87.50 E-value=0.36 Score=45.14 Aligned_cols=51 Identities=12% Similarity=0.093 Sum_probs=34.7
Q ss_pred CcchHHHHHHHHHHHhhCCCc-------------eEecCCCceEEEEe-CCC---CCCEEEEEEecccC
Q 020605 71 GFEEYETSQLVRSELDSLGIE-------------YTWPVAKTGIVASV-GSG---GEPWFGLRAEMDAL 122 (324)
Q Consensus 71 s~~e~~~~~~l~~~l~~~G~~-------------~~~~~~~~nvia~~-~~~---~~~~i~l~~H~DtV 122 (324)
|..+..+.++++++|++.||. +..+..+..+++.. +.. .++. ++.+|+|..
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 556789999999999999976 33344343344332 332 2355 999999965
No 60
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=86.49 E-value=1.2 Score=41.37 Aligned_cols=51 Identities=18% Similarity=0.040 Sum_probs=37.4
Q ss_pred CcchHHHHHHHHHHHhhCCCceE--e-----------cCCCceEEEEeCCCC--CCEEEEEEeccc
Q 020605 71 GFEEYETSQLVRSELDSLGIEYT--W-----------PVAKTGIVASVGSGG--EPWFGLRAEMDA 121 (324)
Q Consensus 71 s~~e~~~~~~l~~~l~~~G~~~~--~-----------~~~~~nvia~~~~~~--~~~i~l~~H~Dt 121 (324)
+..+..+.+++++.|++.||.-- . +..+.|++|...+++ .+.+++.+|+|-
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Ds 95 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDS 95 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEeccc
Confidence 56678999999999999999531 1 122347998764432 378999999993
No 61
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=86.14 E-value=2 Score=40.31 Aligned_cols=117 Identities=10% Similarity=0.022 Sum_probs=71.0
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec------CCCce-EEEEeCCC-CCCEEEEEEecccCCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAKTG-IVASVGSG-GEPWFGLRAEMDALPLQE 126 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~~n-via~~~~~-~~~~i~l~~H~DtVp~~~ 126 (324)
.+-+.+.|+|+..|..--.....+++.++.+++.|++++.. ..+.+ +++.=.++ ..|.++.. +|- |.+.
T Consensus 197 a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l-~y~--g~~~ 273 (515)
T 3kzw_A 197 GQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTI-TYN--GKDK 273 (515)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEE-EEE--SSCS
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEE-EEC--CCCC
Confidence 56778999999999887777889999999999999998761 11211 22221222 12333333 221 1110
Q ss_pred CCCCc---------cccccCCc-ee-e---ccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 127 MVEWE---------HKSKNNGK-MH-G---CGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 127 ~~~~~---------~~~~~~g~-~~-g---rG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
...| |+. +|. |. + .+| .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 274 -~~~~i~LVGKGiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 274 -DEAPIALVGKGITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp -SCCCEEEEEEEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred -CCCcEEEecCceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 0111 211 121 11 1 123 489999999999999875 66888888877765
No 62
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=85.92 E-value=1.3 Score=41.25 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=71.8
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC-----CCc-eEEEEeCCC-CCCEEEEEEecccCCCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-----AKT-GIVASVGSG-GEPWFGLRAEMDALPLQEM 127 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-----~~~-nvia~~~~~-~~~~i~l~~H~DtVp~~~~ 127 (324)
.+-+.+.|+|+..|..--.....+++.++.+++.|++++... .+. .+++.=.++ ..|.++... | . |.+
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~-y-~-~~~-- 241 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLK-W-G-DIK-- 241 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEE-E-S-CTT--
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEE-e-C-CCC--
Confidence 567889999999998767778889999999999999887511 111 122221233 224444443 3 1 211
Q ss_pred CCCccccccCCcee---------e---ccc---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 128 VEWEHKSKNNGKMH---------G---CGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 128 ~~~~~~~~~~g~~~---------g---rG~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
.-|....-.|.-| + .+| .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 242 -~~~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 242 -APKVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp -SCEEEEEECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred -CCeEEEEccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 1121111011111 1 113 489999999999999875 67889888877776
No 63
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=85.64 E-value=9.3 Score=35.79 Aligned_cols=118 Identities=8% Similarity=-0.019 Sum_probs=70.2
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEecC------CC-ceEEEEeCCC-CCCEEEEEEecccCCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV------AK-TGIVASVGSG-GEPWFGLRAEMDALPLQE 126 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~-~nvia~~~~~-~~~~i~l~~H~DtVp~~~ 126 (324)
.+-+.+.|+|+..|..--.....+++.++.+++.|++++..+ .+ +.+++.=.++ ..|.++...+- |.++
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~---g~~~ 280 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYT---PKGT 280 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CSSC
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEEC---CCCC
Confidence 467788999999998777778889999999999999987611 11 1122221222 12333333221 1110
Q ss_pred C--------CCCccccccCCc-ee-ecc---c---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 127 M--------VEWEHKSKNNGK-MH-GCG---H---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 127 ~--------~~~~~~~~~~g~-~~-grG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
. .+..|+. +|. |. +.| | .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 281 ~~~~iaLVGKGITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 281 PVKKVSLVGKGIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp CSEEEEEEEEEEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred CCCcEEEecCceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 0 0111211 121 11 111 2 488999999999998875 67888888887776
No 64
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=84.58 E-value=2.8 Score=39.20 Aligned_cols=118 Identities=13% Similarity=0.032 Sum_probs=72.3
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCC--CceEec------CCCc-eEEEEeCCC-CCCEEEEEEecccCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLG--IEYTWP------VAKT-GIVASVGSG-GEPWFGLRAEMDALPL 124 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~------~~~~-nvia~~~~~-~~~~i~l~~H~DtVp~ 124 (324)
.+-+.+.|+|+..|..--.....+++.++.+++.| +++++. ..+. .+++.=.++ ..|.++...+. |.
T Consensus 161 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g~ 237 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---GS 237 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---CS
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---CC
Confidence 67778999999999877777888999999999999 888751 1122 222222232 22444443332 11
Q ss_pred CCCCCCc---------cccccCCc-ee-ecc---c---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 125 QEMVEWE---------HKSKNNGK-MH-GCG---H---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 125 ~~~~~~~---------~~~~~~g~-~~-grG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
+....-| |+. +|. |. +.| | .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 238 ~~~~~~~i~LVGKGITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 238 PNASEPPLVFVGKGITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp SSTTSCCEEEEECEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCCcEEEEecceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1001112 221 121 11 122 3 489999999999999875 66888888777665
No 65
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=82.21 E-value=3.1 Score=39.12 Aligned_cols=119 Identities=13% Similarity=-0.002 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCC--CceEec------CCCce-EEEEeCCC-CCCEEEEEEecccCC
Q 020605 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLG--IEYTWP------VAKTG-IVASVGSG-GEPWFGLRAEMDALP 123 (324)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~------~~~~n-via~~~~~-~~~~i~l~~H~DtVp 123 (324)
..+-+.+.|+|+..|..--.....+++.++.+++.| +++++- ..+.+ +++.=.++ ..|.++..-+. |
T Consensus 180 ~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~---g 256 (503)
T 1gyt_A 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYK---G 256 (503)
T ss_dssp HHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEE---C
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEEC---C
Confidence 367788999999999877777888999999999999 888761 11111 22221222 22333333221 1
Q ss_pred CCC-C--------CCCccccccCCc-ee-ecc---c---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 124 LQE-M--------VEWEHKSKNNGK-MH-GCG---H---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 124 ~~~-~--------~~~~~~~~~~g~-~~-grG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
.++ . ....|+. +|. |. +.| | .+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 257 ~~~~~~~~i~LVGKGITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 257 NASEDARPIVLVGKGLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp CCCTTCCCEEEEEEEEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCCCCcEEEEcCceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 110 0 0111221 121 11 222 2 489999999999999875 66889888877775
No 66
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=82.01 E-value=19 Score=33.85 Aligned_cols=114 Identities=13% Similarity=-0.016 Sum_probs=68.9
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhCCCceEec------CCC--------------c-eEEEEeCCC--CCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAK--------------T-GIVASVGSG--GEP 111 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~--------------~-nvia~~~~~--~~~ 111 (324)
.+-+.+.|+|+..|..--.....++..++..++.|++++.- ..+ | -++-+|.+. ..+
T Consensus 205 a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 57788999999999877777888888888888899998761 111 1 122233221 123
Q ss_pred EEEEEEecccCCCCCCCCCcccc----cc--CC-ceee-ccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 112 WFGLRAEMDALPLQEMVEWEHKS----KN--NG-KMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 112 ~i~l~~H~DtVp~~~~~~~~~~~----~~--~g-~~~g-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
+|.|.|-= ..|+. .+ +| .+.. ..+.+|.|+.+++++++.+.+ ..+.+|..++...|=
T Consensus 285 ~iaLVGKG----------ITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 285 KIALVGKG----------ITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp EEEEEEEE----------EEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred cEEEecCc----------eEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 44444331 11221 01 11 1111 112478999999999998875 225678777776665
No 67
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=81.84 E-value=3.9 Score=38.33 Aligned_cols=121 Identities=7% Similarity=-0.064 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhC-CCceEec------CCCc-eEEEEeCCC-CCCEEEEEEecccCCC
Q 020605 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP------VAKT-GIVASVGSG-GEPWFGLRAEMDALPL 124 (324)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~------~~~~-nvia~~~~~-~~~~i~l~~H~DtVp~ 124 (324)
..+-+.+.|+|+..|..--.....+++.++.+++. |++++.. ..+. .+++.=.++ ..|.++... |- |.
T Consensus 179 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~-y~--g~ 255 (497)
T 3h8g_F 179 IATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLN-YQ--GG 255 (497)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEE-EE--CS
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEE-EC--CC
Confidence 36788899999999987777788999999999998 9988761 1111 122221222 123333222 21 11
Q ss_pred CCC--------CCCcccc----ccC-Cceee-ccchHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 125 QEM--------VEWEHKS----KNN-GKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 125 ~~~--------~~~~~~~----~~~-g~~~g-rG~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
++. ....|+. .++ +-+.+ ..+.+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 256 ~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 256 KKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp CTTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCCcEEEEcCceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 000 0111221 000 11111 112489999999999999875 66888888877776
No 68
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=79.99 E-value=5.1 Score=37.42 Aligned_cols=118 Identities=9% Similarity=-0.002 Sum_probs=70.7
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhC-CCceEec------CCCc-eEEEEeCCC-CCCEEEEEEecccCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP------VAKT-GIVASVGSG-GEPWFGLRAEMDALPLQ 125 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~------~~~~-nvia~~~~~-~~~~i~l~~H~DtVp~~ 125 (324)
.+-+.+.|+|+..|..--.....+++.++.+++. |++++.. ..+. .+++.=.++ ..|.++...+ - |.+
T Consensus 176 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y-~--g~~ 252 (490)
T 3jru_B 176 AEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKW-N--GGG 252 (490)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEE-E--TTT
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEE-c--CCC
Confidence 6778899999999987777788899999999887 9988761 1111 122221222 2233333322 1 111
Q ss_pred CC-------CCCccccccCCc-ee-ecc---c---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 126 EM-------VEWEHKSKNNGK-MH-GCG---H---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 126 ~~-------~~~~~~~~~~g~-~~-grG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
.. ....|+. +|. |. +.| | .+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 253 ~~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 253 DARPYVLVGKGITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp TSCCEEEEECEEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEcCeeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 00 0111221 111 11 112 2 489999999999999875 67888888877766
No 69
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=79.61 E-value=4.1 Score=38.03 Aligned_cols=118 Identities=9% Similarity=-0.033 Sum_probs=70.0
Q ss_pred HHHHHHHHHhccCCCCCcchHHHHHHHHHHHhhC-CCceEec------CCCc-eEEEEeCCC-CCCEEEEEEecccCCCC
Q 020605 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP------VAKT-GIVASVGSG-GEPWFGLRAEMDALPLQ 125 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~------~~~~-nvia~~~~~-~~~~i~l~~H~DtVp~~ 125 (324)
.+-+.+.|+|+..|..--.....+++.++.+++. |++++.. ..+. .+++.=.++ ..|.++... |- |.+
T Consensus 164 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~-y~--g~~ 240 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCME-YK--GGN 240 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEE-EE--CSC
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEE-EC--CCC
Confidence 5778899999999987777788999999999998 8988761 1121 122221222 123333332 21 111
Q ss_pred CC--------CCCccccccCCc-ee-ecc---c---hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCC
Q 020605 126 EM--------VEWEHKSKNNGK-MH-GCG---H---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (324)
Q Consensus 126 ~~--------~~~~~~~~~~g~-~~-grG---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 179 (324)
+. ....|+. +|. |. +.| | .+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 241 ~~~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 241 EGDAPIVLVGKGLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp TTSCCEEEEEEEEETEE--CC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CCCCcEEEEccceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 00 0111221 121 11 112 2 489999999999999875 66888888887776
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=75.69 E-value=0.57 Score=43.78 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHhhCCCceEe------------------cCCCceEEEEeCCCC---CCEEEEEEecccC
Q 020605 74 EYETSQLVRSELDSLGIEYTW------------------PVAKTGIVASVGSGG---EPWFGLRAEMDAL 122 (324)
Q Consensus 74 e~~~~~~l~~~l~~~G~~~~~------------------~~~~~nvia~~~~~~---~~~i~l~~H~DtV 122 (324)
+..+.++++++|++.||+ +. +..+..+++...++. .+.+++.+|+|.+
T Consensus 37 ~~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 37 ERECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp CSSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 356888999999999997 21 111333888764431 2459999999954
No 71
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=72.32 E-value=6.9 Score=36.63 Aligned_cols=43 Identities=23% Similarity=0.223 Sum_probs=37.4
Q ss_pred CceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 271 ARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 271 ~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
.+++|++.++- -++++++.+++|+++..+.+++.+.++++++.
T Consensus 347 ~~S~n~gv~~~------~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~ 389 (490)
T 3mru_A 347 ETSLNVGVITT------EENKVTVLCLIRSLIDSGRSQVEGMLQSVAEL 389 (490)
T ss_dssp EEEEEEEEEEE------ETTEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEE------eCCEEEEEEEcCCCCchHHHHHHHHHHHHHHH
Confidence 67888888764 36789999999999999999999999998875
No 72
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=54.72 E-value=14 Score=36.35 Aligned_cols=51 Identities=12% Similarity=0.306 Sum_probs=40.3
Q ss_pred hHHHHHHhccCcchHHHHHHHHHHhccCCCCCcc--hHHHHHHHHHHHhhCCCc-eEe
Q 020605 40 LTRELLDSAREPEFFEWMRRIRRRIHENPELGFE--EYETSQLVRSELDSLGIE-YTW 94 (324)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~-~~~ 94 (324)
+...+.+.++. +.+.+.++.+.++|...+. +.++++|+++.|++.|++ ++.
T Consensus 14 l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 14 IRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp HHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 35566666653 6788889999999988774 577899999999999998 654
No 73
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=47.84 E-value=26 Score=31.85 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=31.1
Q ss_pred HHHHHHHHHhccCCCCCc--chHHHHHHHHHHHhhCCCceEe
Q 020605 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYTW 94 (324)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~ 94 (324)
+++.+.++.|...|..++ .+.++++|+.+.|+++|++++.
T Consensus 16 ~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 16 ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 566777777776676554 4688999999999999997654
No 74
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=47.78 E-value=28 Score=31.98 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=28.4
Q ss_pred HHHHHHHHhc----cCCCCCcchHHHHHHHHHHHhhCCC-ceEe
Q 020605 56 WMRRIRRRIH----ENPELGFEEYETSQLVRSELDSLGI-EYTW 94 (324)
Q Consensus 56 ~~~~~~~~l~----~ips~s~~e~~~~~~l~~~l~~~G~-~~~~ 94 (324)
++.+++++|. .+.+-|..+.++++|+.+.|++.|+ +++.
T Consensus 22 ~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~ 65 (444)
T 3iib_A 22 LGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYK 65 (444)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEe
Confidence 3444444444 4556677789999999999999999 5654
No 75
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=46.76 E-value=7.5 Score=35.82 Aligned_cols=45 Identities=11% Similarity=-0.127 Sum_probs=30.6
Q ss_pred CCceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc-ccHHH
Q 020605 137 NGKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYY 186 (324)
Q Consensus 137 ~g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G~~~ 186 (324)
++.+.+++. ..++.+++.+++.+. ..+.++.++| ..||.| .|+.-
T Consensus 226 ~~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~g 273 (428)
T 2ijz_A 226 DEFIAGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCG 273 (428)
T ss_dssp SSSSSCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHH
T ss_pred CCeEEeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhh
Confidence 356766663 467788888877664 3567888888 999955 45443
No 76
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=45.71 E-value=24 Score=23.28 Aligned_cols=32 Identities=13% Similarity=-0.089 Sum_probs=26.8
Q ss_pred CeEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 020605 290 EIVRFGGTFRSLTTEGLLYLEQRIKEVKLFEV 321 (324)
Q Consensus 290 ~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~~a 321 (324)
+--++.+|+|...+...+...+.+++++....
T Consensus 15 dgqeieidirvstgkeleralqelekalarag 46 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAG 46 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhcc
Confidence 44689999999999999999999988877653
No 77
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=43.51 E-value=7.3 Score=36.23 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=28.9
Q ss_pred CCceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc
Q 020605 137 NGKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY 181 (324)
Q Consensus 137 ~g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~ 181 (324)
++.+.+++. +.++++++.+++.+.+ .++.+++++|+..||.|
T Consensus 246 ~~~I~s~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 246 KALIGAYGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIG 289 (458)
T ss_dssp TCEEEESSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC-
T ss_pred CCeEEEecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccC
Confidence 356777774 3566777777665432 46789999999999955
No 78
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=42.41 E-value=17 Score=33.85 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=27.3
Q ss_pred Cceeeccc--hHHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc
Q 020605 138 GKMHGCGH--DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY 181 (324)
Q Consensus 138 g~~~grG~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~ 181 (324)
+.+.+++. ..++.+++.+++.+. .++.+++++|+..||.|
T Consensus 253 ~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVG 294 (461)
T 2glj_A 253 SMVMGYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVG 294 (461)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGT
T ss_pred CEEEEecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCC
Confidence 45666663 356666666665442 36789999999999944
No 79
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=29.89 E-value=28 Score=33.81 Aligned_cols=48 Identities=13% Similarity=0.185 Sum_probs=32.7
Q ss_pred hHHHHHHhccCcchHHHHHHHHHHhcc---CCC--CCcchHHHHHHHHHHHhhCCCc
Q 020605 40 LTRELLDSAREPEFFEWMRRIRRRIHE---NPE--LGFEEYETSQLVRSELDSLGIE 91 (324)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---ips--~s~~e~~~~~~l~~~l~~~G~~ 91 (324)
+...+.+.++.. ++.+.++.|.+ -|. .|..+.++++|+.+.|+++|++
T Consensus 7 l~~~l~~~i~~~----~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 7 LKRKLSEKLDST----DFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHHHHHHHHTC----CHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhCCHH----HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 466667777654 34444555554 233 3455788999999999999997
No 80
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=28.41 E-value=46 Score=30.76 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=25.8
Q ss_pred Cceeeccch--HHHHHHHHHHHHHHhcCCCCCceEEEEEeccCCCc
Q 020605 138 GKMHGCGHD--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY 181 (324)
Q Consensus 138 g~~~grG~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~ 181 (324)
+.+.|.+.| .++.+.+.|+..+ .++.+++++++..||.|
T Consensus 241 ~~i~~~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVG 281 (450)
T 2glf_A 241 SLIGAYGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIG 281 (450)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGT
T ss_pred cEEEEecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccC
Confidence 355555543 4555666665544 35678999999999944
No 81
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=24.60 E-value=1.8e+02 Score=26.61 Aligned_cols=45 Identities=20% Similarity=0.335 Sum_probs=36.0
Q ss_pred CCCceEEEEEEEcCCCCcccCCeEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 020605 269 LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVKLF 319 (324)
Q Consensus 269 ~~~~~~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~~~~~i~~~i~~ 319 (324)
...+++|++.++--. +..++.+++|++.....+.+.+.+++..+.
T Consensus 343 ~~~~s~nl~~~~~~~------~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~ 387 (487)
T 2qyv_A 343 VVETSLSIGVLKTED------NFVRSTMLVRSLIESGKSYVASLLKSLASL 387 (487)
T ss_dssp CEEEEEEEEEEEECS------SEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceEeccceEEEEEcC------CeEEEEEEccCCCHHHHHHHHHHHHHHHHH
Confidence 456788998877533 579999999999999888888888877654
No 82
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=20.05 E-value=2.1e+02 Score=27.26 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=33.6
Q ss_pred CcchHHHHHHHHHHHhhCCCceE-e-c-----C--------CCceEEEEe-CCC--CC-C-EEEEEEeccc
Q 020605 71 GFEEYETSQLVRSELDSLGIEYT-W-P-----V--------AKTGIVASV-GSG--GE-P-WFGLRAEMDA 121 (324)
Q Consensus 71 s~~e~~~~~~l~~~l~~~G~~~~-~-~-----~--------~~~nvia~~-~~~--~~-~-~i~l~~H~Dt 121 (324)
+..+..+.++++++|++.||.-- . + . .+..++|.. +.. ++ . --++.+|.|.
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDS 90 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDS 90 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccC
Confidence 55678999999999999999641 1 1 1 123466653 433 22 3 5688999994
Done!