BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020607
(323 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 244/322 (75%), Gaps = 17/322 (5%)
Query: 9 AASSSLCNKLYNLQAITQIPTNHLPSLFKTK--SPKPLKLE-KAQNPSALHLSLLSLSYF 65
A SSS+CN++YNL + T + F+ + S KP L K+Q + LS L
Sbjct: 3 AVSSSICNRIYNL-SFTHPSLSLTTCNFRQRPISQKPFTLNLKSQ---SFTLSFFPLHRL 58
Query: 66 RQFSASFDGFQVTEDS----QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLP 121
SA+FDGF+V +D+ QDEPETE E+ E+E + KV+ S +A RLYVGNLP
Sbjct: 59 PPPSAAFDGFEVAQDTTEFQQDEPETEPVEKTEQEEEQ-----KVSDSYDAGRLYVGNLP 113
Query: 122 YSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGG 181
YS+T+S+LAE+F EAGTVAS EI+YDRVTDRSRGF FVTMG+VE+AKEAIR+FDGSQ+GG
Sbjct: 114 YSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGG 173
Query: 182 RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPG 241
RTVKVNFPEVP+GGER MG K++NSY+GFVDSPHKIYAGNLGWGLTSQGLR+AF QPG
Sbjct: 174 RTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPG 233
Query: 242 LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLP 301
+LSAKVI+ER +GRSRGFGFV+FETAE Q+ALD MNGVEV+GRPLRLN+A RAP P
Sbjct: 234 VLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEARAPSSPP 293
Query: 302 AAKETKTENSIDGSELLSSIST 323
++ N ++ SEL+SS ST
Sbjct: 294 VIQKNVGSN-VESSELVSSAST 314
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 196/330 (59%), Positives = 241/330 (73%), Gaps = 20/330 (6%)
Query: 1 MAASTVSMAASSSLCNKLYNL---QAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHL 57
MAA+ + SSS+CN++YNL + +++ P ++ P L LE + L
Sbjct: 1 MAATA---SVSSSICNRIYNLSFTHPSLSLTSSNFPQRPVSQKPLSLNLES----QSFAL 53
Query: 58 SLLSLSYFRQFSASFDGFQVTEDS----QDEPETEQEEEEEEEAVEEEEEPKVAASDEAA 113
S L L A+FDG +V +D+ QDEPE E E+ E+E + KV+ S++A
Sbjct: 54 SFLPLHRLPPPFAAFDGLEVAQDTTESQQDEPEPETVEKTEQEEEQ-----KVSDSNDAG 108
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNLPYS+T+S L E+F EAGTVAS EIVYDRVTDRSRGF FVTMGSVE+AKEAIR+
Sbjct: 109 RLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRM 168
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FDGSQ+GGRTVKVNFPEVP+GGER MG K+ NSY+GFVDSPHKIYAGNLGWGLTSQGLR
Sbjct: 169 FDGSQVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYAGNLGWGLTSQGLR 228
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+AF QPG+LSAKVI+ER +GRSRGFGFV+FETAE ++ALD MNGVEV+GRPLRLN+A
Sbjct: 229 EAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQGRPLRLNLAE 288
Query: 294 ERAPPVLPAAKETKTENSIDGSELLSSIST 323
R P P ++ N ++ SEL+SS ST
Sbjct: 289 ARTPSSPPVIQKNVGSN-VESSELVSSAST 317
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 239/310 (77%), Gaps = 14/310 (4%)
Query: 18 LYNLQAITQIPTNHLPSLFKTKSPKPLKLEKA--QNPSALHLSLLSLSYFRQFSASFDGF 75
LYN TQ P N +PS F K + LKL +P+ LS S+S+ +FD
Sbjct: 22 LYNKHFFTQHP-NQIPSHFSPKHNQ-LKLLNLTFHSPNFYPLSFSSVSHLHCAPPAFDEL 79
Query: 76 QVTEDSQDEPETEQ---EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEV 132
++++ PETE +E + EE +EE+E KV+ S EA +LY+GNLPY+MTSS L+EV
Sbjct: 80 EISD-----PETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIGNLPYAMTSSQLSEV 134
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
FAEAG V S +++YD+VTDRSRGF FVTM ++EEAKEAIR+FDGSQIGGRTV+VNFPEVP
Sbjct: 135 FAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP 194
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY 252
RGGE+ MGP++++SY FVDSPHKIYAGNLGWGLTSQ LRDAF+ QPG+LSAK+I++R
Sbjct: 195 RGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRA 254
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSI 312
+G+SRGFGFV+FETAED +SAL++MNGVEVEGRPLRLN+A ++ P+ PAA +TEN+I
Sbjct: 255 SGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQS-PISPAAF-PRTENTI 312
Query: 313 DGSELLSSIS 322
DG ELL+SIS
Sbjct: 313 DGKELLTSIS 322
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/327 (58%), Positives = 244/327 (74%), Gaps = 16/327 (4%)
Query: 1 MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLL 60
+AAST++ + + +KL + IP+ L F K KPLKL +QN ++L S
Sbjct: 6 VAASTITSSPLHTKLSKLSFTHSQLLIPSYFLSKPF-LKPLKPLKL-NSQNSNSLPHS-- 61
Query: 61 SLSYFRQFSASFDGFQVTED----SQDEPETEQEEEEEEEAVEEEEEPKVAA--SDEAAR 114
F+A+FD F+V D +QD+P++E +E ++E EEEEE V A + E +
Sbjct: 62 ----HGTFAATFDNFEVETDENIAAQDDPQSETDEFDQEIVEEEEEEEDVVAIKAREEGK 117
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLPYSMTSS LAEVF EAG V AE++ DRVTDRSRGFGFVTM SVEEAKEAIR+F
Sbjct: 118 LYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMF 177
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+GSQ+GGRT++VNFPEVPRGGER M P++++ Y+GF+DS HKIYAGNLGW LTS+GL D
Sbjct: 178 NGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGD 237
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF QPGLLSAKVI+ER TGRSRGFGFV+F++AE+ ++AL+AMNG EV+GRPLRLN+A E
Sbjct: 238 AFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGE 297
Query: 295 RAPPVLPAAKETKTENSIDGSELLSSI 321
R+ P P AKE TE++++ SELLSSI
Sbjct: 298 RSYP--PPAKENNTEDNLESSELLSSI 322
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 180/210 (85%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNLP+SMTSS L+E+FAEAGTVA+ EIVYDRVTDRSRGF FVTMGSVEEAKEAIRL
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FDGSQ+GGRTVKVNFPEVPRGGER M K++++YQGFVDSPHK+Y NL W LTSQGLR
Sbjct: 170 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 229
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
DAF QPG +SAKVI++R +GRSRGFGF+TF +AE ++SALD MN VE+EGRPLRLN+A
Sbjct: 230 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAG 289
Query: 294 ERAPPVLPAAKETKTENSIDGSELLSSIST 323
++AP P+ ET EN + +ELLSS+S+
Sbjct: 290 QKAPLSSPSVVETSPENDSENNELLSSLSS 319
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 248/329 (75%), Gaps = 14/329 (4%)
Query: 1 MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLE-KAQNPSALHLSL 59
MAAST++ SS L KL NL + T P LPS F +K + N + LSL
Sbjct: 1 MAASTIT---SSPLHTKLSNL-SFTHSPLP-LPSHFSSKPLLKPLKPPQLNNHDSNSLSL 55
Query: 60 LSLSYFRQ-FSASFDGFQV-TEDSQ---DEPETEQEEEEEEEAVEEEEEPKVAASDEAAR 114
LSL +F F+AS D F+ TE++ D+P++E +E ++E VEEE + + + E +
Sbjct: 56 LSLPHFHGIFAASSDSFESGTEENTTALDDPQSETDEFDQE-IVEEEGDVEAIKATEEGK 114
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLPYSMTSS L EVF EAG V SAE++YDRVTDRSRGFGFVTMGSVEEAK+AI++F
Sbjct: 115 LYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQMF 174
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G+Q GGR+V+VNFPEVPRGGER MGP++Q+ Y+GF+DS HKIYAGNLGW LTS+GLRD
Sbjct: 175 NGTQFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYAGNLGWRLTSEGLRD 234
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF QPG+LSAKVI+ER + RSRGFGFV+FE+AE+ ++AL+AMNG EVEGRP+RLN+A E
Sbjct: 235 AFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGE 294
Query: 295 RAPPVLPAAKETKTENSIDGSELLSSIST 323
R+PP P+AKE TEN+++ ELLSS T
Sbjct: 295 RSPP--PSAKENNTENNLESGELLSSFGT 321
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/311 (60%), Positives = 223/311 (71%), Gaps = 32/311 (10%)
Query: 19 YNLQAITQIP-TNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQV 77
Y + ++ IP + H PS+ PKPLKL SA F
Sbjct: 27 YRISKLSLIPISTHFPSI-----PKPLKLTTQ-------------------SAHFPHHLC 62
Query: 78 TEDSQDEPE-----TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEV 132
+P+ E+EEEEEEE EEEE+PKV+ S EA+RLYVGNLPYSMTSS L +V
Sbjct: 63 RTTQHQDPQLQEEEEEEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGDV 122
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
F EAG+V S EIVYDRVTDRSRGF FVTMGSV+EAKEAIR+FDGSQ+GGRTVKVNFPEVP
Sbjct: 123 FNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVP 182
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY 252
RGGERA MGPK+++SY+GFVDSP+KIYAGNL W LTS+GLRDAF PGLL AKVI+ER
Sbjct: 183 RGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERE 242
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSI 312
+GRSRGFGF++F +AE+ +SAL+AMN VEVEGRPLRLN+A RA + E ++
Sbjct: 243 SGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRA--PPAPSPGPGLERNV 300
Query: 313 DGSELLSSIST 323
D SEL+SSIST
Sbjct: 301 DNSELISSIST 311
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/315 (59%), Positives = 222/315 (70%), Gaps = 36/315 (11%)
Query: 19 YNLQAITQIP-TNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQV 77
Y + ++ IP + H PS+ PKPLKL SA F
Sbjct: 166 YRISKLSLIPISTHFPSI-----PKPLKLTTQ-------------------SAHFPHHLC 201
Query: 78 TEDSQDEPE---------TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSS 128
+P+ E+EEEEEEE EEEE+PKV+ S EA+RLYVGNLPYSMTSS
Sbjct: 202 RXTQHQDPQLQEEEEEEEEEEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYSMTSSQ 261
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L VF EAG+V S EIVYDRVTDRSRGF FVTMGSV+EAKEAIR+FDGSQ+GGRTVKVNF
Sbjct: 262 LGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNF 321
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
PEVPRGGERA MGPK+++SY+GFVDSP+KIYAGNL W LTS+GLRDAF PGLL AKVI
Sbjct: 322 PEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKVI 381
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKT 308
+ER +GRSRGFGF++F +AE+ +SAL+AMB VEVEGRPLRLN+A RA +
Sbjct: 382 YERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLRLNLAAVRA--PPAPSPGPGL 439
Query: 309 ENSIDGSELLSSIST 323
E ++D SEL+SSIST
Sbjct: 440 ERNVDNSELISSIST 454
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 148/200 (74%), Positives = 169/200 (84%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNLP+SMTSS L+E+FAEAGTVA+ EIVYDRVTDRSRGF FVTMGSVEEAKEAIRL
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FDGSQ+GGRTVKVNFPEVPRGGER M K++++YQGFVDSPHK+Y NL W LTSQGLR
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 234
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
DAF QPG +SAKVI++R +GRSRGFGF+TF +AE + SALD MN VE+EGRPLRLN+A
Sbjct: 235 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAG 294
Query: 294 ERAPPVLPAAKETKTENSID 313
++AP P ET EN D
Sbjct: 295 QKAPVSSPPVVETSPENDSD 314
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/295 (57%), Positives = 221/295 (74%), Gaps = 6/295 (2%)
Query: 35 LFKTKSPKPLKL-EKAQNPSALHLSLLSLSYF--RQFSASFDGFQVTEDSQDEPETEQEE 91
LF +PK KL NP LH ++ +F + AS ++ ++E E E+EE
Sbjct: 36 LFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEASSADEEIQASLEEEEEVEEEE 95
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
EEE E + +E+ AS E RLYVGNLPY++TSS L+++F EAG V +IVYD+VTD
Sbjct: 96 EEEVEEEDADEKQTTQASGEEGRLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTD 155
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
RSRGFGFVTMG++EEAKEAI++F+ SQIGGRTVKVN PEVPRGGER M K++++ + +
Sbjct: 156 RSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNLPEVPRGGEREVMRTKIRDNNRSY 215
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
VDSPHKIYAGNLGW LTSQGL+DAF QPG+L AKVI+ER TGRSRGFGF++FE+AED+Q
Sbjct: 216 VDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEDVQ 275
Query: 272 SALDAMNGVEVEGRPLRLNMANERAPPVL--PAAKETKTEN-SIDGSELLSSIST 323
SAL MNGVEVEGR LRLN+A+ER P + P+ +E +T++ S++ SE+LS++ST
Sbjct: 276 SALATMNGVEVEGRALRLNLASERERPTVSPPSVEEGETKDVSLESSEVLSNVST 330
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 220/296 (74%), Gaps = 11/296 (3%)
Query: 35 LFKTKSPKPLKL-EKAQNPSALHLSLLSLSYF----RQFSASFDGFQVTEDSQDEPETEQ 89
LF +PK KL NP LH ++ +F + S++ D Q + + ++E E E
Sbjct: 36 LFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEG 95
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+E EEE E++ AS E RLYVGNLPY++TSS L+++F EAGTV +IVYD+V
Sbjct: 96 DEGEEEVEEEKQ---TTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKV 152
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
TDRSRGFGFVTMGS+EEAKEA+++F+ SQIGGRTVKVNFPEVPRGGE M K++++ +
Sbjct: 153 TDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNR 212
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+VDSPHK+YAGNLGW LTSQGL+DAF QPG+L AKVI+ER TGRSRGFGF++FE+AE+
Sbjct: 213 SYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEN 272
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPPVL--PAAKETKTEN-SIDGSELLSSIS 322
+QSAL MNGVEVEGR LRLN+A+ER P + P+ +E +TE S++ +E+LS++S
Sbjct: 273 VQSALATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVS 328
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 220/296 (74%), Gaps = 11/296 (3%)
Query: 35 LFKTKSPKPLKL-EKAQNPSALHLSLLSLSYF----RQFSASFDGFQVTEDSQDEPETEQ 89
LF +PK KL NP LH ++ +F + S++ D Q + + ++E E E
Sbjct: 28 LFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEG 87
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+E EEE E++ AS E RLYVGNLPY++TSS L+++F EAGTV +IVYD+V
Sbjct: 88 DEGEEEVEEEKQ---TTQASGEEWRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKV 144
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
TDRSRGFGFVTMGS+EEAKEA+++F+ SQIGGRTVKVNFPEVPRGGE M K++++ +
Sbjct: 145 TDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNR 204
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+VDSPHK+YAGNLGW LTSQGL+DAF QPG+L AKVI+ER TGRSRGFGF++FE+AE+
Sbjct: 205 SYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEN 264
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPPVL--PAAKETKTEN-SIDGSELLSSIS 322
+QSAL MNGVEVEGR LRLN+A+ER P + P+ +E +TE S++ +E+LS++S
Sbjct: 265 VQSALATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVS 320
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 219/296 (73%), Gaps = 11/296 (3%)
Query: 35 LFKTKSPKPLKL-EKAQNPSALHLSLLSLSYF----RQFSASFDGFQVTEDSQDEPETEQ 89
LF +PK KL NP LH ++ +F + S++ D Q + + ++E E E
Sbjct: 36 LFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEG 95
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+E EEE E++ AS E RLYVGNLPY++TSS L+++F EAGTV +IVYD+V
Sbjct: 96 DEGEEEVEEEKQ---TTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKV 152
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
TDRSRGFGFVTMGS+EEAK A+++F+ SQIGGRTVKVNFPEVPRGGE M K++++ +
Sbjct: 153 TDRSRGFGFVTMGSIEEAKGAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNR 212
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+VDSPHK+YAGNLGW LTSQGL+DAF QPG+L AKVI+ER TGRSRGFGF++FE+AE+
Sbjct: 213 SYVDSPHKVYAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEN 272
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPPVL--PAAKETKTEN-SIDGSELLSSIS 322
+QSAL MNGVEVEGR LRLN+A+ER P + P+ +E +TE S++ +E+LS++S
Sbjct: 273 VQSALATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVS 328
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/200 (73%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
Query: 124 MTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRT 183
MTSS L +VF EAG+V S EIVYDRVTDRSRGF FVTMGSV+EAKEAIR+FDGSQ+GGRT
Sbjct: 1 MTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 60
Query: 184 VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
VKVNFPEVPRGGERA MGPK+++SY+GFVDSP+KIYAGNL W LTS+GLRDAF PGLL
Sbjct: 61 VKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLL 120
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA 303
AKVI+ER +GRSRGFGF++F +AE+ +SAL+AMN VEVEGRPLRLN+A RAPP +
Sbjct: 121 GAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRAPP--APS 178
Query: 304 KETKTENSIDGSELLSSIST 323
E ++D SEL+SSIST
Sbjct: 179 PGPGLERNVDNSELISSIST 198
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 104 PKVAAS-----DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
PK+ +S D ++Y GNL + +TS L + FA+ + A+++Y+R + RSRGFGF
Sbjct: 79 PKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGF 138
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
++ S E A+ A+ + ++ GR +++N V
Sbjct: 139 LSFASAENAESALNAMNEVEVEGRPLRLNLAAV 171
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/184 (72%), Positives = 155/184 (84%), Gaps = 6/184 (3%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNLP+SMTSS L+E+FAEAGTVA+ EIVYDRVTDRSRGF FVTMGSVEEAKEAIRL
Sbjct: 104 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 163
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FDGSQ+GGRTVKVNFPEVPRGGER M K++++YQGFVDSPHK+Y NL W LTSQGLR
Sbjct: 164 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 223
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV------EVEGRPL 287
DAF QPG +SAKVI++R +GRSRGFGF+TF +AE ++SALD MN V EV RP
Sbjct: 224 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVVRIHSDEVSWRPF 283
Query: 288 RLNM 291
+++
Sbjct: 284 GISL 287
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Query: 124 MTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRT 183
MTSS L E+F EAGTV S E++YDRVTDRSRGF FVTMGSV++AKEAIR+FDGSQ+GGR
Sbjct: 1 MTSSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRI 60
Query: 184 VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
V+VNFPEVP+GGER MGPK++N+ + FVDS HKIYAGNLGW ++SQ L+D F QPGL+
Sbjct: 61 VRVNFPEVPKGGERLVMGPKIRNNNRDFVDSSHKIYAGNLGWRVSSQDLKDVFAEQPGLV 120
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA 303
SAKVI+ER +GRSRGFGFVTFETA+D+++AL MNGVEV+GR LRLN+A +AP P+
Sbjct: 121 SAKVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNLAAVKAPSS-PSV 179
Query: 304 KETKTENSIDGSELLSSIST 323
E +S+D SEL+SS ST
Sbjct: 180 TEENEGSSVDTSELVSSAST 199
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 55/82 (67%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D + ++Y GNL + ++S L +VFAE + SA+++Y+R + RSRGFGFVT + ++ +
Sbjct: 90 DSSHKIYAGNLGWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGFVTFETAQDVEA 149
Query: 170 AIRLFDGSQIGGRTVKVNFPEV 191
A++ +G ++ GR +++N V
Sbjct: 150 ALKTMNGVEVQGRELRLNLAAV 171
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 193/278 (69%), Gaps = 28/278 (10%)
Query: 18 LYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQV 77
+ N+ P +PS KPL L NP S LSLS + F S FQ
Sbjct: 17 ICNISLTFNFPHTLIPS-------KPLNL----NPQLFFASPLSLSLY-HFPLSSLSFQ- 63
Query: 78 TEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
D+Q + E ++ EP + +++++RL+VGNLPYS+ SS LA+ F EAG
Sbjct: 64 --DTQKPLQRE---------TFQKPEPNASHTNQSSRLFVGNLPYSLLSSQLAQRFGEAG 112
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER 197
V S EIVYD + DRSRGF FVTMGS+E+A+ AIR+FDGS+IGGR +KVNF +P+ G+R
Sbjct: 113 NVVSVEIVYDDIMDRSRGFAFVTMGSMEDAERAIRMFDGSEIGGRIMKVNFTAIPKRGKR 172
Query: 198 AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
MG ++Y+GFVDSPHKIYAGNLGWGLTSQ LRDAF QPG LSAKVI+ER +GRSR
Sbjct: 173 LVMG----SNYRGFVDSPHKIYAGNLGWGLTSQDLRDAFAEQPGFLSAKVIYERNSGRSR 228
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+GFV+FETAED+++AL++MNGVEV+GRPLRLN+A ++
Sbjct: 229 GYGFVSFETAEDVEAALNSMNGVEVQGRPLRLNLATDK 266
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 171/198 (86%), Gaps = 2/198 (1%)
Query: 124 MTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRT 183
MTSS LAEVF EAG V AE++ DRVTDRSRGFGFVTM SVEEAKEAIR+F+GSQ+GGRT
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 184 VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
++VNFPEVPRGGER M P++++ Y+GF+DS HKIYAGNLGW LTS+GL DAF QPGLL
Sbjct: 61 LRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLL 120
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA 303
SAKVI+ER TGRSRGFGFV+F++AE+ ++AL+AMNG EV+GRPLRLN+A ER+ P P A
Sbjct: 121 SAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSYP--PPA 178
Query: 304 KETKTENSIDGSELLSSI 321
KE TE++++ SELLSSI
Sbjct: 179 KENNTEDNLESSELLSSI 196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 103 EPKVAAS-----DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
EP++ + D ++Y GNL + +TS L + FA + SA+++Y+R T RSRGFG
Sbjct: 78 EPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFG 137
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
FV+ S E A+ A+ +G ++ GR +++N GER+ P +N+ + ++S
Sbjct: 138 FVSFDSAENAEAALEAMNGEEVDGRPLRLNL-----AGERSYPPPAKENNTEDNLES 189
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 170/216 (78%), Gaps = 7/216 (3%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S ++ RL+VGNLP+S++SS LA++F EAG V S EI+YD +T+RSRGF FVTMG+VE+
Sbjct: 102 AESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVED 161
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+EAIR+FDG+ +GGR +KVNFPEVP G+R MG ++Y+G+VDSPHKIYAGNLGW
Sbjct: 162 AEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMG----STYRGYVDSPHKIYAGNLGWD 217
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+TSQ LR AF QPGLLSAKV++ER G+SRG+GFV+FETAED++ AL AMNGVEV+GRP
Sbjct: 218 MTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRP 277
Query: 287 LRLNMANERAPPVLPAAKETKTENSIDGSELLSSIS 322
LRL +A + P++ + N++D E+L IS
Sbjct: 278 LRLKLAVDNRK---PSSLDQNKGNNVDSLEMLFGIS 310
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 158/214 (73%), Gaps = 7/214 (3%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ A E R+YVGNLPY+ T++ L VF+EAG+V +I+YD++TDRSRGF FVTM +
Sbjct: 113 RPALGQEPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATA 172
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER-AAMGPKLQNSYQGFVDSPHKIYAGNL 223
EEA +A+++F+G+ +GGRT++VNFPEVPRGGER A + S + D +K+YAGNL
Sbjct: 173 EEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVDDGTYKVYAGNL 232
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
GWG+ + L+ AF+GQPGLL ++VIFER TGRSRGFGFV+F+T ED +A+ AM+GVE++
Sbjct: 233 GWGVRADALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQAMDGVELD 292
Query: 284 GRPLRLNMANERAPP------VLPAAKETKTENS 311
GRPLRL++A++ P VLP +ET + S
Sbjct: 293 GRPLRLSLASQNPPAGSTPSTVLPKQEETASNGS 326
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D+ RL+VGNLPY+ TS LA+VF+EAG V A+I+YD+VT+RSRGF FVTM + EEA +
Sbjct: 109 DDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAK 168
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
AI++FDG+ +GGRT +VN+PEVPRGGER M + ++ D +KIYAGNLGWG+
Sbjct: 169 AIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRD------DGTYKIYAGNLGWGV 222
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+ LR+ F+G+ GLL A+VIFER TGRSRGFGFV+F TAED Q+AL++++GVE+EGRPL
Sbjct: 223 RADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPL 282
Query: 288 RLNMANERAPPVLPAAKETKTENSID 313
RL++A + PP P + + D
Sbjct: 283 RLSLAEQNPPPGSPPSTAQAQQEETD 308
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 8/187 (4%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D+ RL+VGNLPY+ TS LA+VFAEAG V A+I+YD+VT+RSRGF FVTM + EEA +
Sbjct: 107 DDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAK 166
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
AI++FDG+ +GGRT +VN+PEVPRGGER M + ++ D +KIYAGNLGWG+
Sbjct: 167 AIQMFDGALLGGRTARVNYPEVPRGGERRTVTMAGRRRD------DGTYKIYAGNLGWGV 220
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+ LR+ F+G+ GLL A+VIFER TGRSRGFGFV+F TAED Q+AL+A++GVE+EGRPL
Sbjct: 221 RADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPL 280
Query: 288 RLNMANE 294
RL++A +
Sbjct: 281 RLSLAEQ 287
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 153/206 (74%), Gaps = 8/206 (3%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D+ RL+VGNLPY+ TS LA+VF+EAG V A+I+YD+VT+RSRGF FVTM + EEA +
Sbjct: 109 DDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAK 168
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
AI++FDG+ +GGRT +VN+PEVPRGGER M + ++ D +KIYAGNLGWG+
Sbjct: 169 AIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRD------DGTYKIYAGNLGWGV 222
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+ LR+ F+G+ GLL A+VIFER TGRSRGFGFV+F TAED Q+AL++++GVE+EGR L
Sbjct: 223 RADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSL 282
Query: 288 RLNMANERAPPVLPAAKETKTENSID 313
RL++A + PP P + + D
Sbjct: 283 RLSLAEQNPPPGSPPSTAQAQQEETD 308
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 154/207 (74%), Gaps = 1/207 (0%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ A E RL+VGNLPY+MTS +++ F+EAG V + +I+YD+VTDRSRGF FVTM +
Sbjct: 110 RPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATA 169
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
EEA AI++F+G+ +GGRT +VN+PEVPRGGERA +G D KIYAGNLG
Sbjct: 170 EEAATAIQMFNGALLGGRTARVNYPEVPRGGERA-VGSAAATRENRRDDGTFKIYAGNLG 228
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
WG+ + LR AF+GQPGLL A+VIFER +GRSRGFGFV+F TAED Q+AL+A++GVE+EG
Sbjct: 229 WGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEG 288
Query: 285 RPLRLNMANERAPPVLPAAKETKTENS 311
RPLRL+MA + P+ +++ E +
Sbjct: 289 RPLRLSMAEQNPTAGSPSTVQSQEEET 315
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 148/194 (76%), Gaps = 1/194 (0%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ A E R+YVGNLPY+ T++ L F+EAG+V +I+YD++TDRSRGF FVTM +
Sbjct: 100 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATA 159
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV-DSPHKIYAGNL 223
EEA +A+++F+G+ +GGRTV+VNFPEVPRGGERA + + V D +K+YAGNL
Sbjct: 160 EEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNL 219
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
GWG+ + L+ AF+GQPGL+ A+VIFER TGRSRGFGFV+F T +D ++AL AM+GVE++
Sbjct: 220 GWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELD 279
Query: 284 GRPLRLNMANERAP 297
GRPLRL++A + P
Sbjct: 280 GRPLRLSLAAQNPP 293
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 148/194 (76%), Gaps = 1/194 (0%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ A E R+YVGNLPY+ T++ L F+EAG+V +I+YD++TDRSRGF FVTM +
Sbjct: 100 RPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATA 159
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV-DSPHKIYAGNL 223
EEA +A+++F+G+ +GGRTV+VNFPEVPRGGERA + + V D +K+YAGNL
Sbjct: 160 EEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNL 219
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
GWG+ + L+ AF+GQPGL+ A+VIFER TGRSRGFGFV+F T +D ++AL AM+GVE++
Sbjct: 220 GWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELD 279
Query: 284 GRPLRLNMANERAP 297
GRPLRL++A + P
Sbjct: 280 GRPLRLSLAAQNPP 293
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 153/250 (61%), Gaps = 52/250 (20%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D+ RL+VGNLPY+ TS LA+VF+EAG V A+I+YD+VT+RSRGF FVTM + EEA +
Sbjct: 109 DDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAK 168
Query: 170 AIRLFDGSQ--------------------------------------------IGGRTVK 185
AI++FDG+ +GGRT +
Sbjct: 169 AIQMFDGAVSTAPANWISTSTPHRIGILLLPMNVQACVLTSDRSLAHSSPMQLLGGRTAR 228
Query: 186 VNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
VN+PEVPRGGER M + ++ D +KIYAGNLGWG+ + LR+ F+G+ GLL
Sbjct: 229 VNYPEVPRGGERRTVTMSGRRRD------DGTYKIYAGNLGWGVRADTLRNVFEGRAGLL 282
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA 303
A+VIFER TGRSRGFGFV+F TAED Q+AL++++GVE+EGR LRL++A + PP P +
Sbjct: 283 DARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPS 342
Query: 304 KETKTENSID 313
+ D
Sbjct: 343 TAQAQQEETD 352
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
E E E + E+E+VE ++ P + E +LYVGNLP+ + S LA++F E+G V E++
Sbjct: 135 EEEPESKPEQESVEGQDYPPLP---EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVI 191
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAMGPK 203
YDR + RSRGF FVTM +VEEA+ AI+ F+G +I GR+++VNFPEVPR G A P
Sbjct: 192 YDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSP- 250
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
+++ GFVDSPHK+Y GNL W +TS+ LR+A G+ +L AKVI +R TGRSRGFGFV+
Sbjct: 251 --SNFGGFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVS 308
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
F + ++++A+ M+G+EVEGR +R+N+A R+
Sbjct: 309 FSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSRS 341
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
E E E + E+E+VE ++ P + E +LYVGNLP+ + S LA++F E+G V E++
Sbjct: 143 EEEPESKPEQESVEGQDYPPLP---EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVI 199
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAMGPK 203
YDR + RSRGF FVTM +VEEA+ AI+ F+G +I GR+++VNFPEVPR G A P
Sbjct: 200 YDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSP- 258
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
+++ GFVDSPHK+Y GNL W +TS+ LR+A G+ +L AKVI +R TGRSRGFGFV+
Sbjct: 259 --SNFGGFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVS 316
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
F + ++++A+ M+G+EVEGR +R+N+A R+
Sbjct: 317 FSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSRS 349
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 141/188 (75%), Gaps = 1/188 (0%)
Query: 124 MTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRT 183
MTS +++ F+EAG V + +I+YD+VTDRSRGF FVTM + EEA AI++F+G+ +GGRT
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 184 VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
+VN+PEVPRGGERA +G D KIYAGNLGWG+ + LR AF+GQPGLL
Sbjct: 61 ARVNYPEVPRGGERA-VGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLL 119
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA 303
A+VIFER +GRSRGFGFV+F TAED Q+AL+A++GVE+EGRPLRL+MA + P+
Sbjct: 120 DARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPST 179
Query: 304 KETKTENS 311
+++ E +
Sbjct: 180 VQSQEEET 187
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++Y GNL + + + +L F + A ++++R + RSRGFGFV+ + E+A+ A+
Sbjct: 93 KIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEA 152
Query: 174 FDGSQIGGRTVKVNFPE 190
DG ++ GR ++++ E
Sbjct: 153 LDGVELEGRPLRLSMAE 169
>gi|357440095|ref|XP_003590325.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479373|gb|AES60576.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 156
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 126/163 (77%), Gaps = 9/163 (5%)
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
MG+VE+A+EAIR+FDG+ +GGR +KVNFPEVP G+R MG ++Y+G+VDSPHKIYA
Sbjct: 1 MGNVEDAEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMG----STYRGYVDSPHKIYA 56
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNLGW +TSQ LR AF QPGLLSAKV++ER G+SRG+GFV+FETAED++ AL AMNGV
Sbjct: 57 GNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGV 116
Query: 281 EVEGRPLRLNMA-NERAPPVLPAAKETKTENSIDGSELLSSIS 322
EV+GRPLRL +A + R P L K N++D E+L IS
Sbjct: 117 EVQGRPLRLKLAVDNRKPSSLDQNK----GNNVDSLEMLFGIS 155
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D ++Y GNL + MTS L + FA+ + SA++VY+R +SRG+GFV+ + E+ +
Sbjct: 49 DSPHKIYAGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEV 108
Query: 170 AIRLFDGSQIGGRTVKVNF 188
A+ +G ++ GR +++
Sbjct: 109 ALSAMNGVEVQGRPLRLKL 127
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%), Gaps = 4/158 (2%)
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
I+YD+VT+RSRGF FVTM + EEA +AI++FDG+ +GGRT +VN+PEVPRGGER
Sbjct: 79 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRT---- 134
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
+ S + D +KIYAGNLGWG+ + LR+ F+G+ GLL A+VIFER TGRSRGFGFV+
Sbjct: 135 VTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVS 194
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLP 301
F TAED Q+AL++++GVE+EGR LRL++A + PP P
Sbjct: 195 FSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSP 232
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D ++Y GNL + + + +L VF + A ++++R T RSRGFGFV+ + E+A+
Sbjct: 144 DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQA 203
Query: 170 AIRLFDGSQIGGRTVKVNFPE 190
A+ DG ++ GR+++++ E
Sbjct: 204 ALESLDGVELEGRSLRLSLAE 224
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 142/221 (64%), Gaps = 20/221 (9%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
++ E+ VE E+P+ + E +L+VGNLP+S+ S++LA +F AG V E++YD++T
Sbjct: 69 DQLEDDVEVAEQPRFS---EDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTG 125
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP-----------RGGERAAM 200
RSRGFGFVTM + EE + A + F+G +I GR ++VN P RGG +
Sbjct: 126 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYG 185
Query: 201 GPKLQNSYQG------FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
G + NS G VDS +++Y GNL WG+ L++ F Q ++ AKV+++R +G
Sbjct: 186 GGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSG 245
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RSRGFGFVT+ +++++ A+D++NGV+++GR +R++ A ER
Sbjct: 246 RSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 142/221 (64%), Gaps = 20/221 (9%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
++ E+ VE E+P+ + E +L+VGNLP+S+ S++LA +F AG V E++YD+++
Sbjct: 70 DQLEDDVEVAEQPRFS---EDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSG 126
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP-----------RGGERAAM 200
RSRGFGFVTM + EE + A + F+G +I GR ++VN P RGG +
Sbjct: 127 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYG 186
Query: 201 GPKLQNSYQG------FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
G + NS G VDS +++Y GNL WG+ L++ F Q ++ AKV+++R +G
Sbjct: 187 GGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSG 246
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RSRGFGFVT+ +A+++ A+D++NG++++GR +R++ A ER
Sbjct: 247 RSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 126/188 (67%), Gaps = 3/188 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +L+VGNLP+S+ S+ LA +F +AG+V E+VYDR+T RSRGFGFVTM S EEA A
Sbjct: 75 EDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAA 134
Query: 171 IRLFDGSQIGGRTVKVNF-PEVPRGGE--RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ F+G GR ++VN P PR G RA G FVDS +K+Y GNL WG+
Sbjct: 135 VEQFNGYTFQGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGNKVYVGNLAWGV 194
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+ L + F Q +L AKVI++R +GRSRGFGFVT+ +AE++ +A+ ++G++++GR +
Sbjct: 195 DNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDGRQI 254
Query: 288 RLNMANER 295
R+ +A +
Sbjct: 255 RVTVAESK 262
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 132/209 (63%), Gaps = 16/209 (7%)
Query: 88 EQEEEEEEEAV----EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
EQ+E +EE A ++ P VAAS +LY GNLPY+ S+ LA + E + E
Sbjct: 87 EQDEVQEEGAAVGASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVE 146
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++YDR T RSRGF FVTM +V++ + I+ DGS GGRT+KVNF + P+ + A+ P
Sbjct: 147 VLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPK--PKQALYP- 203
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
++ HK++ GNL W +TS+ L +AF ++ A+V+++ TGRSRG+GFV
Sbjct: 204 ---------ETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVC 254
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ T E++ AL ++NG+E+EGR +R+N+A
Sbjct: 255 YSTREEMDEALSSLNGMEMEGREMRVNLA 283
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T +D + +
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 277 MNGVEVEGRPLRLNMANERAP 297
++G GR +++N A+ P
Sbjct: 177 LDGSLYGGRTMKVNFADRPKP 197
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 135/197 (68%), Gaps = 9/197 (4%)
Query: 101 EEEPKVAASDEAA-----RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
+EE ++ DE + +L+VGNLP+++ S+ LA +F AG V E++YD+VT RSRG
Sbjct: 73 QEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRG 132
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
FGFVTM ++EE + A + F+G ++ GRT++VNF P+ + GP+ ++ DS
Sbjct: 133 FGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETF----DSG 188
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+++Y GNL W + + L F+ + ++ AKV+++R +GRSRGFGFVT+ +AE++ +A+D
Sbjct: 189 NRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAID 248
Query: 276 AMNGVEVEGRPLRLNMA 292
++NG E++GR +R+++A
Sbjct: 249 SLNGAELDGRAIRVSVA 265
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 136/220 (61%), Gaps = 16/220 (7%)
Query: 77 VTEDSQDEPETEQEEEEEEEAV----EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEV 132
V E ++ EQ+E +EE A ++ P VAAS +LY GNLPY+ S+ LA +
Sbjct: 76 VAERGREVQLQEQDEVQEEGAAVGASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGI 135
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
E + E++YDR T RSRGF FVTM +V++ + I+ DGS GGRT+KVNF + P
Sbjct: 136 VQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRP 195
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY 252
+ + A+ P ++ HK++ GNL W +TS+ L +AF ++ A+V+++
Sbjct: 196 K--PKQALYP----------ETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGE 243
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
TGRSRG+GFV + T E++ AL ++NG+E+EGR +R+N+A
Sbjct: 244 TGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLA 283
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T +D + +
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 277 MNGVEVEGRPLRLNMANERAP 297
++G GR +++N A+ P
Sbjct: 177 LDGSLYGGRTMKVNFADRPKP 197
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 121/187 (64%), Gaps = 8/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V +E++Y+R TD+SRGFGFVTM ++EEA++A
Sbjct: 115 EEAKVYVGNLPYDIDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKA 174
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F +GGR + VN PRG +++ + F S +IY GNL W +
Sbjct: 175 VEMFHRYDVGGRLLTVN-KAAPRGA-------RVERPARDFGGSSFRIYVGNLPWQVDDS 226
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT + E+L A+ A++G +EGR LR+N
Sbjct: 227 RLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 286
Query: 291 MANERAP 297
+A ER P
Sbjct: 287 VAEERPP 293
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 134/212 (63%), Gaps = 16/212 (7%)
Query: 85 PETEQEEEEEEEAVE---EEEEPKVAASDEAA-RLYVGNLPYSMTSSSLAEVFAEAGTVA 140
PE ++ ++ E AVE ++ P VAAS +LY GNLPY+ S+ LA + E +
Sbjct: 92 PEQDEVQDGEGGAVEGSSQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPE 151
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
E++YDR+T RSRGF FVTM +V++ + I+ DGS GGRT+KVNF + P+
Sbjct: 152 MVEVLYDRITGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPK------- 204
Query: 201 GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
PKL + ++ HK++ GNL W +TS+ L +AF ++ A+V+++ TGRSRG+G
Sbjct: 205 -PKLPL----YPETEHKLFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYG 259
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
FV + T E++ A+ ++NG E+EGR +R+N+A
Sbjct: 260 FVCYSTKEEMDEAISSLNGTELEGREIRVNLA 291
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T +D + +
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKN 184
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G GR +++N A +R P LP ET+
Sbjct: 185 LDGSLYGGRTMKVNFA-DRPKPKLPLYPETE 214
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 3/185 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNLP+S+ S+ LA +F +AG+V E+VYDR+T RSRGFGFVTM S EEA A+
Sbjct: 79 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPK---LQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
F+G GR ++VN P E A P+ FVDS +K+Y GNL WG+ +
Sbjct: 139 FNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGGSFVDSANKVYVGNLAWGVDNS 198
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L + F Q +L AKVI++R +GRSRGFGFVT+ TA ++ +A+ ++G++++GR +R+
Sbjct: 199 TLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNNAISNLDGIDLDGRQIRVT 258
Query: 291 MANER 295
+A +
Sbjct: 259 VAESK 263
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 153/272 (56%), Gaps = 19/272 (6%)
Query: 32 LPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQEE 91
LPS+ S KP + P ++L L S + S+ F + D PE E+ E
Sbjct: 26 LPSISTISSSKPHHSNFSLPPRPINLPLSLKSKTLRNSSPIVTF--VSQTSDWPEEEEGE 83
Query: 92 EEE--------EEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+ +E+ + E+ K E A+L+VGNLPY + S +LA +F +AGTV +E
Sbjct: 84 DGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISE 143
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++Y+R TD+SRGFGFVTM +VEEAK+A+ F+ ++ GR + VN PRG R P+
Sbjct: 144 VIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNI-AAPRGS-RPERQPR 201
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
D+ +IY GNL W + + L+ F ++ A+V+++R TGRSRGFGFVT
Sbjct: 202 Q-------YDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVT 254
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ A+ A++G +EGR +++N+A ER
Sbjct: 255 MSNENEVNDAIAALDGQNLEGRAIKVNVAEER 286
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 126/203 (62%), Gaps = 7/203 (3%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E++ VA +++YVGNLP++ S+ LAE+ ++ GTV E++YD+++ RSRGF F
Sbjct: 9 EDDVAAPVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAF 68
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP----EVPRGGERAAMGPKLQNSYQGFVDS 214
VTM S ++A+ I DGS +GGR +KVNFP + PR + A P + D
Sbjct: 69 VTMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPR---DD 125
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P+K++ GN+ WG + F ++ AK++++R +GRSRGFGFVT E D Q+A+
Sbjct: 126 PNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAM 185
Query: 275 DAMNGVEVEGRPLRLNMANERAP 297
+ ++G E++GR LR+N A E+ P
Sbjct: 186 ENLDGTELDGRELRVNFAGEKPP 208
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
+D+P E+ E A + P+ D+ +L+VGN+P+ +++ +F+ G+V
Sbjct: 103 KDKPRFEKSEARPPTA---DRRPR----DDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVD 155
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
A+IVYDR + RSRGFGFVTM V +A+ A+ DG+++ GR ++VNF
Sbjct: 156 AKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNF 202
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 35/290 (12%)
Query: 32 LPSLFKTKSP--------KPLKLEKAQNPSALHLSL-----LSLS---------YFRQFS 69
PS+F +K P +P+KL+ + + S LS+ LSL+ + +Q
Sbjct: 9 FPSIFTSKPPLKPLPISHRPIKLQLSYSHSLSTLSVKPKTHLSLTIPFVAQTSDWAQQEE 68
Query: 70 ASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAAS----DEAARLYVGNLPYSMT 125
+ +TE S E E E E EAV E E E A++YVGNLPY +T
Sbjct: 69 ENNTTITLTEVSDWEAEGEDAAASETEAVRGEGERGDEEGFVEPPEEAKIYVGNLPYDVT 128
Query: 126 SSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVK 185
S LA +F +AGTV +E++Y+ TD SRGFGFVTM +VEE+ +AI +F+ + GR +
Sbjct: 129 SEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMSTVEESDKAIEMFNRYNLDGRLLT 188
Query: 186 VNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSA 245
VN PRG R P++ + ++IY GNL WG+ S L + F ++SA
Sbjct: 189 VN-KAAPRGS-RPERPPRVS-------EPSYRIYVGNLPWGVDSGRLEEVFSEHGKVVSA 239
Query: 246 KVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+V+ + TGRSRGFGFVT + +L A+ A++G E++GR +R+N+A ER
Sbjct: 240 QVVSDWETGRSRGFGFVTMSSESELNDAIAALDGQELDGRAIRVNVAAER 289
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++Y+GNLP+S S+ LA + E G+V E++YD+ T RSRGF F TM SVE+A +
Sbjct: 112 KVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVEN 171
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY--QGFVDSPHKIYAGNLGWGLTSQG 231
DGSQ GGRT++VN E R + K ++ Q D H++Y GNL W + +
Sbjct: 172 LDGSQYGGRTLRVNLREEASRSLRVNLRDKSRSEQRNQTNNDGQHRVYIGNLSWDVNEEI 231
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L + F LL AK++F+R TGRSRGFGF+TF T + ++A+ ++NG E+EGR +R+++
Sbjct: 232 LNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASLNGKELEGRAMRVDL 291
Query: 292 A 292
A
Sbjct: 292 A 292
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q + +VI+++ TGRSRGF F T + ED + ++
Sbjct: 112 KVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVEN 171
Query: 277 MNGVEVEGRPLRLNMANE 294
++G + GR LR+N+ E
Sbjct: 172 LDGSQYGGRTLRVNLREE 189
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 140/227 (61%), Gaps = 32/227 (14%)
Query: 93 EEEEAVEEEEEPKVAASDEAA-----------RLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
EE EA +++EE + SDE A +++VGNLP+S+ S++LAE+F AG V
Sbjct: 69 EEVEAGDDDEE-EGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEM 127
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG 201
E++YD++T RSRGFGFVTM S E + A + F+G +I GR ++VN P
Sbjct: 128 VEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAP--------- 178
Query: 202 PKLQN------SYQ-----GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
PK +N SYQ G +DS +++Y GNL W + Q L F Q ++ AKV+++
Sbjct: 179 PKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYD 238
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
R +GRSRGFGFVT+ +A+++ A+++++GV++ GR +R++ A R P
Sbjct: 239 RDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPP 285
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 145/251 (57%), Gaps = 18/251 (7%)
Query: 51 NPSALHLSLLSLSYF-----RQFSASFDGFQVTED-SQDEPETEQEEEEEEEAVEEEEEP 104
+P + L+ LS S + Q +AS+ + + D +Q+E EEEE E E
Sbjct: 39 SPVRIMLATLSRSNYVIEPLSQVAASWRVPRASADVAQEEAPATAPAVEEEELASGETEG 98
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ +LY GNLPY++ S+ LA + E GT E++Y R T RSRGF FVTM S+
Sbjct: 99 EADQVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSI 158
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
E+ + I DGSQ GR ++VNF + P+ E + ++ +K++ GNL
Sbjct: 159 EDCETVIENLDGSQYMGRILRVNFADKPKPKEPL------------YPETEYKLFIGNLS 206
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W +TS+ L AFQ ++ A+V+++ TG+SRG+GFV + T E+L++AL ++NGVE+EG
Sbjct: 207 WSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEG 266
Query: 285 RPLRLNMANER 295
R LR+++A R
Sbjct: 267 RALRVSLAEGR 277
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + + S L Q G P ++ +V++ R TGRSRGF FVT + ED ++ +
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMV--EVLYHRETGRSRGFAFVTMSSIEDCETVI 165
Query: 275 DAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ ++G + GR LR+N A++ P P+ P
Sbjct: 166 ENLDGSQYMGRILRVNFADKPKPKEPLYP 194
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 120/187 (64%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V +E++Y+R TDRSRGFGFVTM +VEEA++A
Sbjct: 141 EEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKA 200
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F + GR + VN + A G +++ + F S +IY GNL W +
Sbjct: 201 VEMFHRYDVDGRLLTVN--------KAAPRGARVERPPRQFGPS-FRIYVGNLPWQVDDS 251
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT T E+L A+ A++G ++GR LR+N
Sbjct: 252 RLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVN 311
Query: 291 MANERAP 297
+A ER P
Sbjct: 312 VAEERPP 318
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 211 FVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETA 267
+V+ P K+Y GNL + + S+ L F+ Q G++ ++VI+ R T RSRGFGFVT T
Sbjct: 136 YVEPPEEAKVYVGNLPYDIDSERLAQLFE-QAGIVEVSEVIYNRETDRSRGFGFVTMSTV 194
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANER 295
E+ + A++ + +V+GR L +N A R
Sbjct: 195 EEAEKAVEMFHRYDVDGRLLTVNKAAPR 222
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 123/185 (66%), Gaps = 3/185 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNLP+++ S+ LAE+F AG V E++YD+ T RSRGFGFVTM SVEEA+ A +
Sbjct: 87 KLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQ 146
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---DSPHKIYAGNLGWGLTSQ 230
F+G ++ GR ++VN P E A + DS ++++ NL WG+ +
Sbjct: 147 FNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNV 206
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+ F+ Q +L A+VI++R +GRSRGFGFVTF + +++ SA+ ++NGV++ GR +R++
Sbjct: 207 ALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVS 266
Query: 291 MANER 295
+A+ +
Sbjct: 267 LADSK 271
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+++ S+ LA +F +AG+V E+VYDR+T RSRGFGFVTMGSVEE A
Sbjct: 85 EDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAA 144
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF--VDSPHKIYAGNLGWGLT 228
+ F+G GR ++VN P E A P+ G DS +K+Y GNL WG+
Sbjct: 145 VEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAMGGGGGGGSFDSANKLYVGNLSWGVD 204
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L + F Q +L AKVI++R +GRSRGFGFVT+ +A+++ +A+ ++GV+++GR +R
Sbjct: 205 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 264
Query: 289 LNMANER 295
+ +A +
Sbjct: 265 VTVAESK 271
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 160/288 (55%), Gaps = 33/288 (11%)
Query: 32 LPSLFKTKSP---------KPLKLEKAQN------PSA-LHLSLLSLSYFRQFSASFDGF 75
LP++F TK+P KP+KL + + PS L LS S + + D
Sbjct: 22 LPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLFLKSKTLSSSVVTFVAQTSDWA 81
Query: 76 QVTEDSQDEPETEQEEE---EEEEAVEEEEEPKVAASD-----EAARLYVGNLPYSMTSS 127
Q ED+ E EQEE+ E EEA+ ++ E A+++VGNLPY + S
Sbjct: 82 QQEEDNTVIIEEEQEEKVTWENEEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSE 141
Query: 128 SLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN 187
LA +F +AG V AE++Y+R TDRSRGFGFV+M +VEEA++A+ +F ++ GR + VN
Sbjct: 142 RLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVN 201
Query: 188 FPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKV 247
PRG + P++ + ++Y GNL W + S L F ++ A+V
Sbjct: 202 -KAAPRGSQ-PERPPRV-------FEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARV 252
Query: 248 IFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+F+R TGRSRGFGFVT + +L+ A+ A +G ++GR +R+N+A ER
Sbjct: 253 VFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEER 300
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 18/207 (8%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
EEE E VE EE KV YVGNLPY + S LA++F +AG V +E++Y+R T
Sbjct: 103 EEEVGEYVEPPEEAKV---------YVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRET 153
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
D+SRGFGFVTM ++EEA++A+ +F + GR + VN PRG R P+ +S
Sbjct: 154 DQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN-KAAPRGA-RVERPPR--DSGSS 209
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
F +IY GNL W + L + F ++ AKV+++R TGRSRGFGFVT + E+L
Sbjct: 210 F-----RIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEEL 264
Query: 271 QSALDAMNGVEVEGRPLRLNMANERAP 297
A+ A++G +EGR LR+N+A ER P
Sbjct: 265 DDAIAALDGQSLEGRALRVNVAEERPP 291
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 17/212 (8%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
E + E AVE+EE + E A++YVGNLPY + S LA++F +AG V AE++Y+
Sbjct: 91 EDDAVEASAAVEDEEVGEYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYN 150
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER----AAMGPK 203
R TDRSRGFGFVTM +VEEA +A+ + + GR + VN PRG GP
Sbjct: 151 RETDRSRGFGFVTMSTVEEADKAVEMLHRYDVNGRLLTVN-KAAPRGSRVDRPPRQSGPS 209
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
L +IY GNL W + L F ++ A+V+++R TGRSRGFGFVT
Sbjct: 210 L------------RIYVGNLPWQVDDSKLVQMFSEHGKVVDARVVYDRETGRSRGFGFVT 257
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
T ++L A+ A++G ++GR LR+N+A ER
Sbjct: 258 MATQDELDDAIAALDGQSLDGRALRVNVAEER 289
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 211 FVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETA 267
+V+ P K+Y GNL + + S+ L F+ Q G++ A+VI+ R T RSRGFGFVT T
Sbjct: 109 YVEPPEEAKVYVGNLPYDVDSERLAQLFE-QAGVVEVAEVIYNRETDRSRGFGFVTMSTV 167
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPPV 299
E+ A++ ++ +V GR L +N A R V
Sbjct: 168 EEADKAVEMLHRYDVNGRLLTVNKAAPRGSRV 199
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV EE P A +S+ A RLYVGN+P ++T+ L ++ E G V AE++YD+ + RS
Sbjct: 60 AVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRS 119
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
R F FVTM + E+A AI +G++IGGR +KVN E P ++ P LQ+ FVD
Sbjct: 120 RRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPL---QSLDLPSLQSDESQFVD 176
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
SP+K+Y GNL + + L++ F + +LSAKV T +S GFGFVTF + ED++ A
Sbjct: 177 SPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVA 236
Query: 274 LDAMNGVEVEGRPLRLNMA 292
+ + N +EG+P+R+N A
Sbjct: 237 ISSFNNSLLEGQPIRVNKA 255
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV EE P A +S+ A RLYVGN+P ++T+ L ++ E G V AE++YD+ + RS
Sbjct: 60 AVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRS 119
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
R F FVTM + E+A AI +G++IGGR +KVN E P ++ P LQ+ FVD
Sbjct: 120 RRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPL---QSLDLPSLQSDETQFVD 176
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
SP+K+Y GNL + + L++ F + +LSAKV T +S GFGFVTF + ED++ A
Sbjct: 177 SPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVA 236
Query: 274 LDAMNGVEVEGRPLRLNMA 292
+ + N +EG+P+R+N A
Sbjct: 237 ISSFNNSLLEGQPIRVNKA 255
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 126/184 (68%), Gaps = 9/184 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM SVEE + A+
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
F+G + GR+++VN P P+ Q+S + +++Y GNL WG+ + L
Sbjct: 147 FNGYILDGRSLRVNSGPPP---------PREQSSQRAPRGEANRVYVGNLSWGVDNAALA 197
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F G+ +L AKVI++R +GRSRGFGFVT+ +AE++++A+ ++G +++GR +R+ +A
Sbjct: 198 NLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAE 257
Query: 294 ERAP 297
+ P
Sbjct: 258 SKPP 261
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 127/207 (61%), Gaps = 18/207 (8%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
EEE E VE EE KV YVGNLPY + S LA++F +AG V +E++Y+R T
Sbjct: 103 EEEVGEYVEPPEEAKV---------YVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRET 153
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
D+SRGFGFVTM ++EEA++A+ +F + GR + VN PRG R P+ +S
Sbjct: 154 DQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN-KAAPRGA-RVERPPR--DSGSS 209
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
F +IY GNL W + L + F ++ A+V+++R TGRSRGFGFVT + E+L
Sbjct: 210 F-----RIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEEL 264
Query: 271 QSALDAMNGVEVEGRPLRLNMANERAP 297
A+ A++G +EGR LR+N+A ER P
Sbjct: 265 DDAIAALDGQSLEGRALRVNVAEERPP 291
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 126/184 (68%), Gaps = 9/184 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM SVEE + A+
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
F+G + GR+++VN P P+ Q+S + +++Y GNL WG+ + L
Sbjct: 147 FNGYILDGRSLRVNSGPPP---------PREQSSRRAPRGEANRVYVGNLSWGVDNAALA 197
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F G+ +L AKVI++R +GRSRGFGFVT+ +AE++++A+ ++G +++GR +R+ +A
Sbjct: 198 NLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAE 257
Query: 294 ERAP 297
+ P
Sbjct: 258 SKPP 261
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 164/314 (52%), Gaps = 42/314 (13%)
Query: 9 AASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPK---PLKLEKAQNPSALHLSLLSLSYF 65
+A+++ C K +L + + PS+F KS PLK P+ L+LS+ S F
Sbjct: 3 SATANPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLK------PTKLNLSISVFSPF 56
Query: 66 RQFSASFDGFQVTEDSQDEPETEQEEEEEEEAV------------------------EEE 101
+S V + S + E+ ++E+ V EEE
Sbjct: 57 SPQKSSTIVSYVAQTSDWDQESSNALLDDEQQVGGATWGTQNFGDSEPQVSGVGNEDEEE 116
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E + E A+L+VGNLPY + S LA++F AG V AE++Y+R TDRSRGFGFVTM
Sbjct: 117 SEQGFSEPPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTM 176
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+VEEA++A+ + +G + GR + VN PRG R P+ + ++Y G
Sbjct: 177 STVEEAEKAVEMLNGFDMNGRLLTVN-KAAPRGS-RPERPPRE-------FEPSCRVYVG 227
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL W + + L F +LSA+V+ +R TGRSRGFGFV+ + ++ A+ A++G
Sbjct: 228 NLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQT 287
Query: 282 VEGRPLRLNMANER 295
++GR +R+N+A ER
Sbjct: 288 LDGRAIRVNVAEER 301
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 163/298 (54%), Gaps = 23/298 (7%)
Query: 1 MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLL 60
M+ ++MA + + + L +PT LP L + PL L + L L+ L
Sbjct: 4 MSLRCLAMAMADTALPPAHKL-----LPTVSLPLLSSSTRAAPLLLFARRR---LPLAPL 55
Query: 61 SLSYFRQFSASFDGFQVTEDSQDEP-ETEQEEEEEEEAVEEEEEPKVAASD--EAARLYV 117
S + S D E+ EP E E E EE A E E + AA + E A++YV
Sbjct: 56 VTSSDAVEAKSADE---EEEKAGEPVEMEAGEFEEVLASGGEGEGQYAAVEPPEEAKVYV 112
Query: 118 GNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGS 177
GNLPY + S LA++F +AG V AE++Y+R T +SRGFGFVTM +VEEA +AI +F
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRY 172
Query: 178 QIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ 237
I GR + VN R R G +++ + F + + Y GNL W + L F
Sbjct: 173 DISGRLLNVN-----RASSR---GTRMERPQRQFAPA-FRAYVGNLPWQVDDSRLVQLFS 223
Query: 238 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ AKV+++R TGRSRGFGFV+ + E+L A+ A++G E++GRPLR+N+A ER
Sbjct: 224 EHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER 281
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 165/298 (55%), Gaps = 23/298 (7%)
Query: 1 MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLL 60
M+ +++MA + + + L +PT LP L + PL L + L L+ L
Sbjct: 4 MSLRSLAMAMADTALPPAHKL-----LPTVSLPLLSSSTRAAPLLLFARRR---LPLAPL 55
Query: 61 SLSYFRQFSASFDGFQVTEDSQDEP-ETEQEEEEEEEAVEEEEEPKVAASD--EAARLYV 117
S + S D E+ EP + E E EE A E E + AA + E A++YV
Sbjct: 56 VTSSDAVEAKSADE---EEEKAGEPVDMEAGEFEEVLASGGEGEGQYAAVEPPEEAKVYV 112
Query: 118 GNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGS 177
GNLPY + S LA++F +AG V AE++Y+R T +SRGFGFVTM +VEEA +AI +F+
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFNRY 172
Query: 178 QIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ 237
I GR + VN R R G +++ + F + + Y GNL W + L F
Sbjct: 173 DISGRLLNVN-----RASSR---GTRMERPQRQFAPA-FRAYVGNLPWQVDDSRLVQLFS 223
Query: 238 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ AKV+++R TGRSRGFGFV+ + E+L A+ A++G E++GRPLR+N+A ER
Sbjct: 224 EHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER 281
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 134/208 (64%), Gaps = 11/208 (5%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
+EE+ + +EP + +L+VGNLP+++ S+ LA++F AG V E+ YD+VT R
Sbjct: 74 QEEDVFGDGDEPSFSPD---LQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGR 130
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG-- 210
SRGFGFVTM ++EE + A + F+G ++ GR ++VN P+ + P+ +NS+
Sbjct: 131 SRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGP 190
Query: 211 ------FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
DS +++Y GNL W + L F+ + ++ AKV+++R +GRS+GFGFVT+
Sbjct: 191 GARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTY 250
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+AE+++ A+D++NG E++GR +R+++A
Sbjct: 251 SSAEEVEDAVDSLNGAELDGRAIRVSVA 278
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 116/179 (64%), Gaps = 12/179 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY GNLPY+ S+ LA + + T E++YDR T RSRGF FVTM ++E+ ++ I+
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DGS GRT++VNF + P+ PKL + ++ HK++ GNL W +TS+ L
Sbjct: 206 LDGSLYSGRTMRVNFADKPK--------PKLPL----YPETEHKLFVGNLSWTVTSEMLT 253
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ FQ ++ A+V+++ TGRSRG+GFV + T E++ AL ++NG E+EGR +R+N+A
Sbjct: 254 EMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 312
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T ED + +
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G GR +R+N A ++ P LP ET+
Sbjct: 206 LDGSLYSGRTMRVNFA-DKPKPKLPLYPETE 235
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 134/219 (61%), Gaps = 22/219 (10%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E++E+ + +E EP + +L+VGNLP+++ S+ LA +F +AG V E++YD++T
Sbjct: 72 EQDEDVLSDEGEPSFSPD---LKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITG 128
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP---------------RGGE 196
RSRGFGFVTM +VEE + A + F+G ++ GR ++VN P RG
Sbjct: 129 RSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGEN 188
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
GP+ + ++S ++IY GNL WG+ L F Q + A+VI++R TGRS
Sbjct: 189 TNFRGPRGGAN----LNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRS 244
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RGFGFVT+ +AE++ A+++++GV++ GR +R+ MA R
Sbjct: 245 RGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR 283
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 120/187 (64%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V +E++Y+R TDRSRGFGFVTM +VEEA++A
Sbjct: 5 EEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKA 64
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F + GR + VN + A G +++ + F S +IY GNL W +
Sbjct: 65 VEMFHRYDVDGRLLTVN--------KAAPRGARVERPPRQFGPS-FRIYVGNLPWQVDDS 115
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT T E+L A+ A++G ++GR LR+N
Sbjct: 116 RLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVN 175
Query: 291 MANERAP 297
+A ER P
Sbjct: 176 VAEERPP 182
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GNL + + S+ L F+ Q G++ ++VI+ R T RSRGFGFVT T E+ + A++
Sbjct: 8 KVYVGNLPYDIDSERLAQLFE-QAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 66
Query: 276 AMNGVEVEGRPLRLNMANERAPPV 299
+ +V+GR L +N A R V
Sbjct: 67 MFHRYDVDGRLLTVNKAAPRGARV 90
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 118/185 (63%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+++VGNLPY + S LA +F +AGTV AE++Y+R TD SRGFGFVTM +VEE+++A
Sbjct: 147 EEAKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKA 206
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + GR + VN PRG R P++ + ++IY GNL W + S
Sbjct: 207 VEMLHRYDLDGRFLTVN-KAAPRGS-RPERPPRVS-------EPGYRIYVGNLPWDVDSG 257
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++SA+V+F+R T RSRGFGFVT T +L A+ A++G ++GRP+R+N
Sbjct: 258 RLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPIRVN 317
Query: 291 MANER 295
+A ER
Sbjct: 318 VAEER 322
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
E P+V S+ R+YVGNLP+ + S L ++F+E G V SA +V+DR T+RSRGFGFVT
Sbjct: 233 ERPPRV--SEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVT 290
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
M + E +AI DG + GR ++VN E
Sbjct: 291 MSTESELNDAIAALDGQNLDGRPIRVNVAE 320
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 119/189 (62%), Gaps = 12/189 (6%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S +LY GNLPYS S+ LA + G+ E++Y+R T RSRGF FVTM SVE+
Sbjct: 105 AESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVED 164
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
I DGS+ GGRT++VNF + P+ PKL + ++ +K++ GNL W
Sbjct: 165 CNAVIENLDGSEYGGRTLRVNFSDKPK--------PKLPL----YPETEYKLFVGNLSWS 212
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+TS+ L FQ ++ A+V+++ TGRSRG+GFV + T ++ +AL+++NGVE+EGR
Sbjct: 213 VTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRA 272
Query: 287 LRLNMANER 295
+R+++A R
Sbjct: 273 IRISLAQGR 281
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + S L Q G P L+ +V++ R TGRSRGF FVT + ED + +
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELV--EVLYNRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
+ ++G E GR LR+N + ++ P LP ET+
Sbjct: 170 ENLDGSEYGGRTLRVNFS-DKPKPKLPLYPETE 201
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 116/179 (64%), Gaps = 12/179 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY GNLPY+ S+ LA + + T E++YDR T RSRGF FVTM ++E+ ++ I+
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DGS GRT++VNF + P+ PKL + ++ HK++ GNL W +TS+ L
Sbjct: 208 LDGSLYSGRTMRVNFADKPK--------PKLPL----YPETEHKLFVGNLSWTVTSEMLT 255
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ FQ ++ A+V+++ TGRSRG+GFV + T E++ AL ++NG E+EGR +R+N+A
Sbjct: 256 EMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 314
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T ED + +
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G GR +R+N A ++ P LP ET+
Sbjct: 208 LDGSLYSGRTMRVNFA-DKPKPKLPLYPETE 237
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGN+P + T+ LA++F E G V AE++YD+ T RSR F FVTM +VE+A+ AI
Sbjct: 74 RLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEK 133
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G++IGGR +KVN E P G F+DSP+K+Y GNL +T++ L+
Sbjct: 134 MNGTEIGGRVIKVNITEKPLD----VSGLNRLTEEAEFIDSPYKVYVGNLAKAVTTETLK 189
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
F + +L AKV TG+S G+GFV+F + D+++A+ A N V +EG+P+R+N+
Sbjct: 190 KKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISAFNNVVLEGKPMRVNV 247
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++Y GN+ T++ L F + A+V++++YT RSR F FVT T ED Q+A++
Sbjct: 73 RRLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIE 132
Query: 276 AMNGVEVEGRPLRLNM 291
MNG E+ GR +++N+
Sbjct: 133 KMNGTEIGGRVIKVNI 148
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 122/185 (65%), Gaps = 3/185 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+S+ S+ LA +F +AG+V E+VYDR T RSRGFGFVTM + EEA A
Sbjct: 73 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 132
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+G GR ++VN P + A P+ S DS +K+Y GNL WG+ +
Sbjct: 133 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSN---FDSSNKLYVGNLAWGVDNS 189
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L + F Q +L AKVI++R +GRSRGFGFVT+ +AE++ +A+ ++GV+++GR +R+
Sbjct: 190 TLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVT 249
Query: 291 MANER 295
+A +
Sbjct: 250 VAESK 254
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 122/185 (65%), Gaps = 3/185 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+S+ S+ LA +F +AG+V E+VYDR T RSRGFGFVTM + EEA A
Sbjct: 78 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 137
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+G GR ++VN P + A P+ S DS +K+Y GNL WG+ +
Sbjct: 138 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSN---FDSSNKLYVGNLAWGVDNS 194
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L + F Q +L AKVI++R +GRSRGFGFVT+ +AE++ +A+ ++GV+++GR +R+
Sbjct: 195 TLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVT 254
Query: 291 MANER 295
+A +
Sbjct: 255 VAESK 259
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 135/214 (63%), Gaps = 10/214 (4%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
E +TE E+E E+ EE E +L+VGNLP+S+ S+ LA +F +AG+V E
Sbjct: 58 EYKTEGAEQEGEDGSEE--------FSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVE 109
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
+VYDR+T RSRGFGFVTM S EEA+ A+ F+G GR ++VN P E P+
Sbjct: 110 VVYDRMTGRSRGFGFVTMSSAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPR 169
Query: 204 --LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
GFVDS +K+Y GNL WG+ + L + F Q +L AKVI++R +GRSRGFGF
Sbjct: 170 GGGGGGGGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGF 229
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
VT+ +A+++ +A+ ++G++++GR +R+ A +
Sbjct: 230 VTYGSAQEVNNAISNLDGIDLDGRQIRVTAAESK 263
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 130/215 (60%), Gaps = 14/215 (6%)
Query: 86 ETEQEEEEEEEA-----VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+TE E+ EE+ VE EE E A+L+VGNLPY + +LAE+F +AGTV
Sbjct: 89 QTESGAEDGEESGGDGFVEGGEEDSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVE 148
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
AE++Y+R TD+SRGFGFVTM +VEEA++A+ +F+ I GR + VN PRG R
Sbjct: 149 VAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVN-KAAPRGA-RVDR 206
Query: 201 GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
P+ + ++Y GNL W + L F ++ A+V+++R TGRSRGFG
Sbjct: 207 PPRA-------FEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFG 259
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
FVT T +L A+ A++G ++GR +R+N+A +R
Sbjct: 260 FVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDR 294
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 161/310 (51%), Gaps = 56/310 (18%)
Query: 32 LPSLFKTKSP---------KPLKLEKAQN------PSA-LHLSLLSLSYFRQFSASFDGF 75
LP++F TK+P KP+KL + + PS L LS S + + D
Sbjct: 22 LPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLFLKSKTLSSSVVTFVAQTSDWA 81
Query: 76 QVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASD------------------------- 110
Q ED+ E EQEE+ E EE E P ASD
Sbjct: 82 QQEEDNTVIIEEEQEEKVTWEN-EEVEGPDAQASDWESEGEGAVTEAISDDGVVDDGEDS 140
Query: 111 -----EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
E A+++VGNLPY + S LA +F +AG V AE++Y+R TDRSRGFGFV+M +VE
Sbjct: 141 YSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVE 200
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
EA++A+ +F ++ GR + VN PRG + P++ + ++Y GNL W
Sbjct: 201 EAEKAVDMFHRYELDGRLLTVN-KAAPRGSQ-PERPPRV-------FEPAFRMYVGNLPW 251
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ S L F ++ A+V+F+R TGRSRGFGFVT + +L+ A+ A +G ++GR
Sbjct: 252 DVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGR 311
Query: 286 PLRLNMANER 295
+R+N+A ER
Sbjct: 312 TIRVNVAEER 321
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+S+ S+ LA +F +AG+V E+VYDR T RSRGFGFVTM + EEA A
Sbjct: 19 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 78
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I F+G GR ++VN P + A P+ S DS +K+Y GNL WG+ +
Sbjct: 79 IEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSN---FDSSNKLYVGNLAWGVDNS 135
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L + F Q +L AKVI++R +GRSRGFGFVT+ +AE++ +A+ ++GV+++GR +R+
Sbjct: 136 TLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVT 195
Query: 291 MA 292
+A
Sbjct: 196 VA 197
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNLP++ S+ LAE+ ++ GTV E++YD+++ RSRGF FVTM + E+A+ I
Sbjct: 45 KLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINA 104
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DG+ +GGR +KVN+P+ + R + + D +K++ GNL WG L
Sbjct: 105 LDGTDMGGRPLKVNYPQSQKDKPRVERSERPR-------DDANKLFVGNLSWGCDEAALY 157
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F ++ AKV+F+R +GRSRGFGFVT E+A +A++ ++G E++GR LR+N+A
Sbjct: 158 SFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAG 217
Query: 294 ERAP 297
E+ P
Sbjct: 218 EKPP 221
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+ ++++ VE E P+ D+A +L+VGNL + ++L F+E GTV A++V+DR
Sbjct: 121 QSQKDKPRVERSERPR----DDANKLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRD 176
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
+ RSRGFGFVTM S A AI DG+++ GR ++VN
Sbjct: 177 SGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNL 215
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y+R + +SRGFGFVTM ++EEA +A
Sbjct: 103 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 162
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I F+ I GR + VN R +R G +++ + F S + Y GNL W
Sbjct: 163 IETFNRYDISGRLLNVN-----RAAQR---GSRVERPPRQFASS-FRAYVGNLPWQAEDS 213
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +++A ++++R TGRSRGFGFVT + EDL SA+ A++G E++GRPLR+N
Sbjct: 214 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 273
Query: 291 MANER 295
+A ER
Sbjct: 274 VAAER 278
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 116/179 (64%), Gaps = 12/179 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY GNLPY++ S+ LA + + GT E++YDR T RSRGF FVTM +VE+ I
Sbjct: 114 KLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIEN 173
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DGSQ GR ++VNF + P+ E + ++ HK++ GNL W +TS+ L
Sbjct: 174 LDGSQFMGRILRVNFSDKPKPKEPL------------YPETEHKLFVGNLSWSVTSESLV 221
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+AFQ ++ A+V+++ TGRSRG+GFV + T ++++AL ++NGVE+EGR +R+++A
Sbjct: 222 EAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLA 280
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+TS SL E F E G + A ++YD T RSRG+GFV + E + A+
Sbjct: 205 KLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVS 264
Query: 174 FDGSQIGGRTVKVNFPE 190
+G ++ GR ++V+ +
Sbjct: 265 LNGVELEGRAMRVSLAQ 281
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + + S L Q G P L+ +V+++R TGRSRGF FVT T ED + +
Sbjct: 114 KLYFGNLPYNVDSAQLAGIIQDYGTPELV--EVLYDRDTGRSRGFAFVTMSTVEDCNAVI 171
Query: 275 DAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ ++G + GR LR+N +++ P P+ P
Sbjct: 172 ENLDGSQFMGRILRVNFSDKPKPKEPLYP 200
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 133/208 (63%), Gaps = 7/208 (3%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E+EE+ + + P + +L+VGNLP+S+ S+ LAE+F AG V E++YD+ T
Sbjct: 71 EQEEDTFGDGDGPSFS---RDLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTG 127
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
RSRGFGFVTM SVEEA+ A + F+G ++ GR+++VN P E A +
Sbjct: 128 RSRGFGFVTMSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARNESAPRFRGGSSFGSRG 187
Query: 212 V---DSPHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETA 267
DS ++++ GNL WG+ L F+ Q +L A+VI++R +GRSRGFGFVTF +
Sbjct: 188 GGPSDSENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRSRGFGFVTFGSP 247
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANER 295
++++SA+ +++GV++ GR +R+++A+ +
Sbjct: 248 DEVKSAIQSLDGVDLNGRAIRVSLADSK 275
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y+R + +SRGFGFVTM ++EEA +A
Sbjct: 106 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 165
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I +F+ I GR + VN R +R G +++ + F S + Y GNL W
Sbjct: 166 IEMFNRYDISGRLLNVN-----RAAQR---GSRVERPPRQFA-SAFRAYVGNLPWQAEDS 216
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +L+A V+++R TGRSRGFGFVT + E+L A+ A++G E++GRPLR+N
Sbjct: 217 RLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDAISALDGQELDGRPLRVN 276
Query: 291 MANER 295
+A ER
Sbjct: 277 VAAER 281
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 36/235 (15%)
Query: 82 QDEPETEQEEEEEE--EAVEEEEEPKVAASD----------------------EAARLYV 117
Q+E EQ E+E EAV+EEE+ + A + A +LY
Sbjct: 78 QEEAAAEQPREDEPIGEAVQEEEQDQGGAVEASSGSVDDYGDGAGTGAAEAASSATKLYF 137
Query: 118 GNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGS 177
GNLPY+ S+ LA + + T E++YDR T RSRGF FVTM ++E+ + I+ DG+
Sbjct: 138 GNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGT 197
Query: 178 QIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ 237
GRT++VN + P+ E + ++ HK++ GNL W +T + L DAFQ
Sbjct: 198 LYSGRTMRVNMADKPKPKEPL------------YPETEHKLFVGNLSWTVTPEMLTDAFQ 245
Query: 238 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ A+V+++ TGRSRG+GFV + T E++ A++ +NG E+EGR +R+N+A
Sbjct: 246 QCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 300
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T ED + +
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 277 MNGVEVEGRPLRLNMANERAP--PVLP 301
++G GR +R+NMA++ P P+ P
Sbjct: 194 LDGTLYSGRTMRVNMADKPKPKEPLYP 220
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y+R + +SRGFGFVTM ++EEA +A
Sbjct: 103 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 162
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I F+ I GR + VN R +R G +++ + F S + Y GNL W
Sbjct: 163 IETFNRYDISGRLLNVN-----RAAQR---GSRVERPPRRFASS-FRAYVGNLPWQAEDS 213
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +++A ++++R TGRSRGFGFVT + EDL SA+ A++G E++GRPLR+N
Sbjct: 214 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 273
Query: 291 MANER 295
+A ER
Sbjct: 274 VAAER 278
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 128/188 (68%), Gaps = 9/188 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM SVEE + A
Sbjct: 79 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVA 138
Query: 171 IRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ F+G + GR+++VN P PR +R++ P+ +++Y GNL WG+ +
Sbjct: 139 VDQFNGYVLDGRSLRVNSGPPPPR--DRSSRSPQRPRG------DANRVYVGNLSWGVDN 190
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L + F Q +L A++I++R +GRSRGFGFVT+ +AE++++A+ ++G +++GR +R+
Sbjct: 191 SALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRV 250
Query: 290 NMANERAP 297
+A + P
Sbjct: 251 TVAESKPP 258
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 134/206 (65%), Gaps = 7/206 (3%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
+EE +E + + A D +L+VGNLP+++ S+ LA +F AG V E++YD+ T R
Sbjct: 75 QEEGTLEVDGDDSSYAPD--LKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGR 132
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPKLQNSYQGF 211
SRGFGFVTM +V E + A + F+G ++ GR ++VN+ P P+ + + G + + +
Sbjct: 133 SRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRF--- 189
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D+ ++++ NL WG+ L + F+ + +L AKV+++R +G+SRGFGFVT+ +AE++
Sbjct: 190 -DNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVN 248
Query: 272 SALDAMNGVEVEGRPLRLNMANERAP 297
A+ +++GV+++GRP+R+ A R P
Sbjct: 249 EAIQSLDGVDLDGRPIRVTQAEARPP 274
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 155/278 (55%), Gaps = 27/278 (9%)
Query: 32 LPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQEE 91
LPSL +PK L L P +L L + + S F Q +P +
Sbjct: 11 LPSL----NPKTLSLCNPNKPISLSFKL----HAKPISIPSSLFSSFVPLQQQPYSSSSR 62
Query: 92 EEEEEAVEEE---EEPKVAASDEAA-----RLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
A+ E EE + DE++ +L+VGNLP+++ S+ LA +F AG V E
Sbjct: 63 FVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVE 122
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++YD+VT RSRGFGFVTM S++E + A + F+G ++ GR ++VN P+ + P+
Sbjct: 123 VIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPR 182
Query: 204 L------QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
S +G +++Y GNL W + + L F Q ++ AKV+++R +GRSR
Sbjct: 183 FGGGGGGGESLEG-----NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSR 237
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GFGFVT+ +AE++++A+D++NG E++GR +R+++A R
Sbjct: 238 GFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEAR 275
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 135/211 (63%), Gaps = 16/211 (7%)
Query: 87 TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
TE+ E E + EEE E R++VGNLP+S+ S+ LA +F +AG+V E++Y
Sbjct: 64 TEELEAEGQPGGEEE-------FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIY 116
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
D++T RSRGFGFVTM SV+E + A+ F+G + GR+++VN P P+ +
Sbjct: 117 DKLTGRSRGFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPP---------PRDPS 167
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
S +G +++Y GNL WG+ + L + F Q +L A+++++R +GRSRGFGFVT+ +
Sbjct: 168 SQRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGS 227
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
AE++++A+ ++G +++GR +R+ +A + P
Sbjct: 228 AEEVENAISNLDGSDLDGRQIRVTVAESKPP 258
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 131/207 (63%), Gaps = 9/207 (4%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
++EEE E +EE +A E +++VGNLP+ + S+ LA++F +AG V SAE++Y+R
Sbjct: 112 EDEEESGEVGFADEEDSYSAPPEEVKIFVGNLPFDLESADLADLFNKAGVVESAEVIYNR 171
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
TD+SRGFGFV+M +VEE +AI +FD I GRT+ VN PRG RA P+
Sbjct: 172 ETDQSRGFGFVSMSTVEEVVKAIEMFDRYDINGRTLTVN-KAAPRGS-RAERPPRD---- 225
Query: 209 QGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
+ ++Y GN+ W + + L F + A+++F+R TGRSRGFGFVT +
Sbjct: 226 ---FEPAFRVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQI 282
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANER 295
+++ A+ A++G +++GR ++++MA ER
Sbjct: 283 EMEDAIAALDGSDLDGRAIKVSMAQER 309
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 134/218 (61%), Gaps = 10/218 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E EE+ ++ P+ + +L+VGNLP+++ S+ LA++F AG V E++YD+V
Sbjct: 68 EFEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKV 127
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPK----- 203
T RSRGFGFVTM SV E + A F+G ++ GR ++VN P P+ + + GP+
Sbjct: 128 TGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 187
Query: 204 ----LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
S +++Y GNL WG+ L F Q ++ A+VI++R +GRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGF 247
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
GFVT+ +++++Q+A++++NG +++GR +R++ A R P
Sbjct: 248 GFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPP 285
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 116/185 (62%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+ + S +LA +F +AGTV AE++Y+R TDRSRGFGFVTM ++EE K+A
Sbjct: 115 EEDKIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKA 174
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F G ++ GR + VN P+G + ++ G ++Y GNL W +
Sbjct: 175 VEMFSGYELNGRVLTVN-KAAPKGAQPERPPRPPRSFSSGL-----RVYVGNLPWEVDDA 228
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F + A+V+++R TGRSRGFGFVT + D+ A+ A++G ++GR +R+N
Sbjct: 229 RLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVN 288
Query: 291 MANER 295
+A +R
Sbjct: 289 VAQDR 293
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 131/219 (59%), Gaps = 12/219 (5%)
Query: 80 DSQDEPE-TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
+SQD E E E + E AV E E E A+L+VGNL Y + S +LA +F +AGT
Sbjct: 103 ESQDVSEGDESEGDVSEGAVSERAE--FPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGT 160
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
V AE++Y+R TD+SRGFGFVTM SV+EA+ A+ F+ + GR + VN PRG R
Sbjct: 161 VEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGS-RP 218
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
P++ + ++Y GNL W + + L F ++ A+V+++R TGRSRG
Sbjct: 219 ERAPRV-------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 271
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
FGFVT ++L A+ A++G +EGR +R+N+A ER P
Sbjct: 272 FGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 310
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 119/185 (64%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y++ + +SRGFGFVTM ++EEA +A
Sbjct: 103 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKA 162
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I F+ I GR + VN R +R G +++ + F S + Y GNL W
Sbjct: 163 IETFNRYNISGRLLNVN-----RAAQR---GSRVERPPRQFASS-FRAYVGNLPWQAEDS 213
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +++A ++++R TGRSRGFGFVT + EDL SA+ A++G E++GRPLR+N
Sbjct: 214 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 273
Query: 291 MANER 295
+A ER
Sbjct: 274 VAAER 278
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 122/187 (65%), Gaps = 2/187 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +L+VGNLP+++ S+ LA +F +AG+V E+VYDR+T RSRGFGFVTM + EE A
Sbjct: 82 EDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAA 141
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF--VDSPHKIYAGNLGWGLT 228
+ F+G GR ++VN P E A P+ G DS +K+Y GNL WG+
Sbjct: 142 VEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRGMGGGGGGGSFDSGNKLYVGNLSWGVD 201
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L + F Q +L AKVI++R +GRSRGFGFVT+ +A+++ +A+ ++GV+++GR +R
Sbjct: 202 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 261
Query: 289 LNMANER 295
+ +A +
Sbjct: 262 VTVAESK 268
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 120/187 (64%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V +E++Y+R TD+SRGFGFVTM ++EEA++A
Sbjct: 113 EEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKA 172
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F + GR + VN PRG R P+ +S F +IY GNL W +
Sbjct: 173 VEMFHRYDVNGRLLTVN-KAAPRGA-RVERPPR--DSGSSF-----RIYVGNLPWQVDDS 223
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L + F ++ A+V+++R TGRSRGFGFVT + +L A+ A++G +EGR LR+N
Sbjct: 224 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAIAALDGQSLEGRALRVN 283
Query: 291 MANERAP 297
+A ER P
Sbjct: 284 VAEERPP 290
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 120/185 (64%), Gaps = 11/185 (5%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A+L+VGNLPY + S LA +F +AG V AE++Y+R TD+SRGFGFVTM +VEEA++A+
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPK-LQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+++ + GR + VN + R GER P+ + SY +IY GN+ WG+
Sbjct: 196 MYNRYDVNGRLLTVN--KAARRGERPERPPRTFEQSY--------RIYVGNIPWGIDDAR 245
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L F ++SA+V+++R TGRSRGFGFVT + ++ A+ ++G ++GR +R+N+
Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNV 305
Query: 292 ANERA 296
A +R+
Sbjct: 306 AEDRS 310
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNL Y + S +LA +F +AGTV AE++Y+R TD+SRGFGFVTM SV+EA+ A
Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+ + GR + VN PRG R P++ + ++Y GNL W + +
Sbjct: 208 VEKFNRYDLNGRLLTVN-KAAPRGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNG 258
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT ++L A+ A++G +EGR +R+N
Sbjct: 259 RLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318
Query: 291 MANERAP 297
+A ER P
Sbjct: 319 VAEERPP 325
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNL Y + S +LA +F +AGTV AE++Y+R TD+SRGFGFVTM SV+EA+ A
Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+ + GR + VN PRG R P++ + ++Y GNL W + +
Sbjct: 208 VEKFNRYDLNGRLLTVN-KAAPRGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNG 258
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT ++L A+ A++G +EGR +R+N
Sbjct: 259 RLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318
Query: 291 MANERAP 297
+A ER P
Sbjct: 319 VAEERPP 325
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 16/198 (8%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
EE +EP E A+L+VGNLPY + S LA++F +AG V AE++Y+R TDRSRGFGF
Sbjct: 88 EEYQEPS-----EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGF 142
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK-LQNSYQGFVDSPHK 217
VTM +VEEA +A+ L+ + GR + VN PRG R P+ Q +Y +
Sbjct: 143 VTMSTVEEADKAVELYSQYDLNGRLLTVN-KAAPRGS-RPERAPRTFQPTY--------R 192
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
IY GN+ W + L F ++SA+V+F+R +GRSRGFGFVT + ++ A+ +
Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252
Query: 278 NGVEVEGRPLRLNMANER 295
+G ++GR +R+N A ER
Sbjct: 253 DGQTLDGRTIRVNAAEER 270
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 12/219 (5%)
Query: 80 DSQDEPETEQEEEEEEE-AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
+SQD E ++ E + E AV E E E A+L+VGNL Y + S +LA +F +AGT
Sbjct: 93 ESQDVSEGDESEGDVSEGAVSERAE--FPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGT 150
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
V AE++Y+R TD+SRGFGFVTM SV+EA+ A+ F+ + GR + VN PRG R
Sbjct: 151 VEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGS-RP 208
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
P++ + ++Y GNL W + + L F ++ A+V+++R TGRSRG
Sbjct: 209 ERAPRV-------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRG 261
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
FGFVT ++L A+ A++G +EGR +R+N+A ER P
Sbjct: 262 FGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 300
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNL Y + S +LA +F +AGTV AE++Y+R TD+SRGFGFVTM SV+EA+ A
Sbjct: 129 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+ + GR + VN PRG R P++ + ++Y GNL W + +
Sbjct: 189 VEKFNRYDLNGRLLTVN-KAAPRGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNG 239
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT ++L A+ A++G +EGR +R+N
Sbjct: 240 RLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 299
Query: 291 MANERAP 297
+A ER P
Sbjct: 300 VAEERPP 306
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNL Y + S +LA +F +AGTV AE++Y+R TD+SRGFGFVTM SV+EA+ A
Sbjct: 134 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 193
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ F+ + GR + VN PRG R P++ + ++Y GNL W + +
Sbjct: 194 VEKFNRYDLNGRLLTVN-KAAPRGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNG 244
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R TGRSRGFGFVT ++L A+ A++G +EGR +R+N
Sbjct: 245 RLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 304
Query: 291 MANERAP 297
+A ER P
Sbjct: 305 VAEERPP 311
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E E AVE EE KV YVGNLPY + S LA++F +AG V AE++Y+R
Sbjct: 100 EGEGEYAAVEPPEEAKV---------YVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRE 150
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T +SRGFGFVTM ++EEA +AI +F+ I GR + VN R R G +++ +
Sbjct: 151 TGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVN-----RASPR---GTRMERPPR 202
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
F + + Y GNL W + L F +++A V+++R +GRSRGFGFVT + E+
Sbjct: 203 QFAPA-FRAYVGNLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEE 261
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
L A+ A++G E++GRPLR+N+A ER
Sbjct: 262 LDDAISALDGQELDGRPLRVNVAAER 287
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 17/189 (8%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y+R TD+SRGFGFVTM +VEEA++A
Sbjct: 123 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKA 182
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGG--ERAAM--GPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ +F + GR + VN PRG +R GP L +IY GNL W
Sbjct: 183 VEMFHRYDVNGRLLTVN-KAAPRGSRVDRPPRQSGPSL------------RIYVGNLPWQ 229
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ L + F ++ A+V+++R TGRSRGFGFVT + ++L A+ A++G ++GR
Sbjct: 230 VDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAIAALDGQSLDGRA 289
Query: 287 LRLNMANER 295
LR+N+A ER
Sbjct: 290 LRVNVAEER 298
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 12/194 (6%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+E E VA D +LY GNLPYS+ S+ LA + E G+ E++YDR T +SRGF F
Sbjct: 103 KENGEEIVAEEDTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAF 162
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
TM VE+ K I DG + GRT++VNF + P+ E + ++ +K+
Sbjct: 163 ATMTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKESL------------YPETEYKL 210
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL W +TS+ L +AFQ ++ A+VI++ TG SRG+GFV++ ++++AL MN
Sbjct: 211 FIGNLSWKVTSEILTEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAALTIMN 270
Query: 279 GVEVEGRPLRLNMA 292
VE+EGR LR+++A
Sbjct: 271 DVELEGRALRVSLA 284
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L++GNL + +TS L E F E GTV A ++YD T SRG+GFV+ + E + A+ +
Sbjct: 209 KLFIGNLSWKVTSEILTEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAALTI 268
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
+ ++ GR ++V+ + R
Sbjct: 269 MNDVELEGRALRVSLAQGKR 288
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
D+ K+Y GNL + + S L + +V+++R TG+SRGF F T ED ++
Sbjct: 114 DTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDCKA 173
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPPVLPAAKET 306
++ ++G E GR LR+N +++ P AKE+
Sbjct: 174 VIENLDGKEFMGRTLRVNFSDK------PKAKES 201
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 135/211 (63%), Gaps = 11/211 (5%)
Query: 89 QEEEEEEEAVEEEEE--PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
++ E+ ++ VEEE P + +++VGNLP+S S++LAE+F AG V E++Y
Sbjct: 68 EDVEDGDDGVEEERNFSPDL-------KIFVGNLPFSADSAALAELFERAGNVEMVEVIY 120
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
D++T RSRGFGFVTM S EE + A + F+G ++ GR ++VN P +R + +
Sbjct: 121 DKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPE--KRENSSFRGGS 178
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
G DS +++Y GNL WG+ L F Q ++ AKV+++R +GRSRGFGFVT+ +
Sbjct: 179 RGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSS 238
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
AE++ +A+++++GV++ GR +R++ A R P
Sbjct: 239 AEEVNNAIESLDGVDLNGRAIRVSPAEARPP 269
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 125/201 (62%), Gaps = 19/201 (9%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY+GNLP+ S+ LA + E G+V E++YD+ + RSRGF FVTM + E+A+ I
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 174 FDGSQIGGRTVKVNFPE-------VPRGG--ERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
DG +GGR +KV+FP+ PRG +R+ P+ D P+K++ GNL
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAAR-----DDPNKVFVGNLS 115
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
WG+ + L++ F ++ A+V+++R +GRSRGFGFVT+ ++ +A+D+++G E +G
Sbjct: 116 WGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDG 175
Query: 285 RPLRLNMANERAPPVLPAAKE 305
R LR+N+A + PA+K+
Sbjct: 176 RELRVNLAGNK-----PASKD 191
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
E P+ AA D+ +++VGNL + + + +L E+F++ G V A +VYDR + RSRGFGFVT
Sbjct: 95 ERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVT 154
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
V E AI DG++ GR ++VN
Sbjct: 155 YSDVSEVDAAIDSLDGAEFDGRELRVNL 182
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 161/300 (53%), Gaps = 30/300 (10%)
Query: 11 SSSLCNKLYNLQAITQIPTNHL---PSLFKTKSPKP--LKLEKAQNPSALHLSLLSLSYF 65
+SS+ L A+T ++ L PS+F S + + P L LSL S +
Sbjct: 2 TSSVLTPSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLSLKSKT-L 60
Query: 66 RQFSASFDGFQVTEDSQDEPETEQEEEEE----------EEAVEEEEEPKVAASDEAARL 115
R S VT SQ E+EE E+ +E+ E E+ E A+L
Sbjct: 61 RNSSPV-----VTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKL 115
Query: 116 YVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFD 175
+VGNLPY + S +LA +F +AGTV +E++Y+R TD+SRGFGFVTM +VEEA++A+ F+
Sbjct: 116 FVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFN 175
Query: 176 GSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDA 235
++ GR + VN PRG R P++ D+ +IY GNL W + S L
Sbjct: 176 SFEVNGRRLTVN-RAAPRGS-RPERQPRV-------YDAAFRIYVGNLPWDVDSGRLERL 226
Query: 236 FQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F ++ A+V+ +R TGRSRGFGFV ++ A+ A++G +EGR +++N+A ER
Sbjct: 227 FSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEER 286
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 115/183 (62%), Gaps = 12/183 (6%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S +LY GNLPYS S+ LA + G+ E++Y+R T RSRGF FVTM SVE+
Sbjct: 105 AESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVED 164
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
I DGS+ GGRT++VNF + P+ PKL + ++ +K++ GNL W
Sbjct: 165 CNAVIENLDGSEYGGRTLRVNFSDKPK--------PKL----PLYPETEYKLFVGNLSWS 212
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+TS+ L FQ ++ A+V+++ TGRSRG+GFV + T ++ +AL+++NGVE+EGR
Sbjct: 213 VTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRA 272
Query: 287 LRL 289
+R+
Sbjct: 273 IRV 275
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + S L Q G P L+ +V++ R TGRSRGF FVT + ED + +
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELV--EVLYNRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
+ ++G E GR LR+N + ++ P LP ET+
Sbjct: 170 ENLDGSEYGGRTLRVNFS-DKPKPKLPLYPETE 201
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 157/277 (56%), Gaps = 24/277 (8%)
Query: 33 PSLFKTKSPKPLKLEKAQNPSALHLSLLSLSY----FRQFSASFDGFQVTEDS----QDE 84
PSLF S KPL L+ + S++ LSL + ++ + + + D Q ED QDE
Sbjct: 33 PSLFSPPS-KPLTLQFSCINSSVSLSLAARAHRSPLVTRVAQTSDWAQQEEDDTATFQDE 91
Query: 85 ----PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
ET+ E E+ E A E A+L+VGNLPY + S LA +F +AGTV
Sbjct: 92 EQGLSETQAGLSSWEPNGEDAGEESFAEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVE 151
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG--ERA 198
AE++Y+R TD+SRGFGFVTM +VEEA+ A+ F GR + VN PRG ER
Sbjct: 152 IAEVIYNRETDQSRGFGFVTMSTVEEAENAVEKFSRYDFDGRLLTVN-KASPRGTRPER- 209
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
P ++S++ + IY GNL W + + L F +++A+V+++R T RSRG
Sbjct: 210 ---PPPRHSFEPSL----SIYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRG 262
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
FGFVT +++ A+ A++G ++GRP+R+++A +R
Sbjct: 263 FGFVTMSDETEMKDAVAALDGQSLDGRPIRVSVAEDR 299
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNLPY + S LA++F EAG V AE++Y+R TD+SRGFGF+TM +VEEA++A
Sbjct: 91 EEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKA 150
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F+ + GR + VN + A G + + Q F S +IY GNL W +
Sbjct: 151 VEMFNRYDLNGRFLTVN--------KAAPRGSRPERPPQAFEPS-FRIYVGNLPWQVDDA 201
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R T RSRGFGFVT + +L A+ A++G ++GR +R+N
Sbjct: 202 RLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVN 261
Query: 291 MANER 295
+A ER
Sbjct: 262 VAEER 266
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 136/248 (54%), Gaps = 43/248 (17%)
Query: 82 QDEPETEQEEEEEEEAV----EEEEEPKVAASD--------------------------- 110
Q+E T EEE+EE V EE E P ASD
Sbjct: 878 QEEDNTVIIEEEQEEKVTWENEEVEGPDAQASDWESEGEGAVTEAISDDGVVDDGEDSYS 937
Query: 111 ---EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
E A+++VGNLPY + S LA +F +AG V AE++Y+R TDRSRGFGFV+M +VEEA
Sbjct: 938 EPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEA 997
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++A+ +F ++ GR + VN PRG + P++ + ++Y GNL W +
Sbjct: 998 EKAVDMFHRYELDGRLLTVN-KAAPRGSQ-PERPPRV-------FEPAFRMYVGNLPWDV 1048
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
S L F ++ A+V+F+R TGRSRGFGFVT + +L+ A+ A +G ++GR +
Sbjct: 1049 DSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTI 1108
Query: 288 RLNMANER 295
R+N+A ER
Sbjct: 1109 RVNVAEER 1116
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 117/183 (63%), Gaps = 9/183 (4%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A+++VGNLPY + S LA +F +AGTV AE++Y+R TD SRGFGFV+M +VEEA++A+
Sbjct: 141 AKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVE 200
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+F + GR + VN PRG R P++ + ++IY GNL W + + L
Sbjct: 201 MFHRHDLDGRLLTVN-KAAPRGS-RPERPPRV-------FEPGYRIYVGNLPWDVDNARL 251
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F ++ A+V+++R TGRSRGFGFVT T +L A+ A++G ++GR +R+N+A
Sbjct: 252 EQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVA 311
Query: 293 NER 295
+R
Sbjct: 312 EQR 314
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 36/304 (11%)
Query: 10 ASSSLCNKLYNLQAI---TQIPTNHLPSLFKTKSPKPLKLEK-AQNPSALHLSLLSLSYF 65
A+S+ N AI TQ PT+ P PK L LEK N S H L
Sbjct: 2 ATSTATNHFLKTLAISITTQKPTSIFP-------PKSLVLEKPTTNNSQFHYKTHHLCCM 54
Query: 66 RQFSASFDGFQVTEDSQDEPETEQEEEEEEEAV---EEEEEPKVAAS----------DEA 112
S F+ E S + E+E E+ EA E+ EP+ ++ E
Sbjct: 55 CCLQTS--DFE-QESSPNAVIDEEENVEKTEAAVNWEDASEPQPSSGFGSEDGFSEPSED 111
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
+LYVGNLP+ + S LA +F AG V AE++Y+R TDRSRGFGFVTM +VEEA +A+
Sbjct: 112 VKLYVGNLPFDVDSEKLANMFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 171
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+F ++ GR + VN PRG R P+ F + Y GNL W + + L
Sbjct: 172 MFHSYELNGRLLTVN-KAAPRGS-RPEKAPR------EFCPLLSESYVGNLPWDVDNDRL 223
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA-LDAMNGVEVEGRPLRLNM 291
+LSA+V+ +R T RSRGFGFVT + ++ A L A++G +EGRP+R+N+
Sbjct: 224 EQLSSEHGKVLSARVVSDRETERSRGFGFVTMASETEMNDATLGALDGESLEGRPIRVNV 283
Query: 292 ANER 295
A ER
Sbjct: 284 AEER 287
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 10/218 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E EE+ + PK + +L+VGNLP+++ S+ LA++F AG V E++YD++
Sbjct: 68 EFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKI 127
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPK----- 203
T RSRGFGFVTM SV E + A + F+G ++ GR ++VN P P+ + + GP+
Sbjct: 128 TGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 187
Query: 204 ----LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
S +++Y GNL WG+ L F Q ++ A+VI++R +GRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
GFVT+++++++Q+A+ +++G +++GR +R++ A R P
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 10/218 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E EE+ + PK + +L+VGNLP+++ S+ LA++F AG V E++YD++
Sbjct: 68 EFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKI 127
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPK----- 203
T RSRGFGFVTM SV E + A + F+G ++ GR ++VN P P+ + + GP+
Sbjct: 128 TGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 187
Query: 204 ----LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
S +++Y GNL WG+ L F Q ++ A+VI++R +GRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
GFVT+++++++Q+A+ +++G +++GR +R++ A R P
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNLPY + S LA++F EAG V AE++Y+R TD+SRGFGF+TM +VEEA++A
Sbjct: 131 EEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKA 190
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F+ + GR + VN + A G + + Q F S +IY GNL W +
Sbjct: 191 VEMFNRYDLNGRFLTVN--------KAAPRGSRPERPPQAFEPS-FRIYVGNLPWQVDDA 241
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R T RSRGFGFVT + +L A+ A++G ++GR +R+N
Sbjct: 242 RLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVN 301
Query: 291 MANER 295
+A ER
Sbjct: 302 VAEER 306
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNLPY + S LA +F AG V AE++Y+R TDRSRGFGFVTM +VEEA++A
Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGG-ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ L +G + GR + VN PRG ERA +G + ++Y GNL W + +
Sbjct: 113 VELLNGYDMDGRQLTVN-KAAPRGSPERAP---------RGDFEPSCRVYVGNLPWDVDT 162
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F ++SA+V+ +R TGRSRGFGFVT + ++ A+ A++G ++GR +R+
Sbjct: 163 SRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRV 222
Query: 290 NMANER 295
N+A ER
Sbjct: 223 NVAEER 228
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 209 QGFVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
QGF + P K++ GNL + + S+ L F + A+VI+ R T RSRGFGFVT T
Sbjct: 46 QGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMST 105
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
E+ + A++ +NG +++GR L +N A R P
Sbjct: 106 VEEAEKAVELLNGYDMDGRQLTVNKAAPRGSP 137
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 150/270 (55%), Gaps = 11/270 (4%)
Query: 29 TNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSY---FRQFSASFDGFQVTEDSQDEP 85
T PSLF T KPL L+ + S++ LSL + ++ F A + E+ Q
Sbjct: 23 TKTKPSLF-TPPSKPLTLQFSCLNSSVSLSLAAPTHRSPLVTFVAQTSDWAQQEEEQSLA 81
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
ETE E E E+ + E A+L+VGNLPY + S LA +F +AGTV AE++
Sbjct: 82 ETEAGLESWEPNGEDAGDESFVEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVI 141
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
Y+R TD+SRGFGFVTM +VEEA+ A+ F+ I GR + VN P+
Sbjct: 142 YNRETDQSRGFGFVTMSTVEEAESAVEKFNRYDIDGRLLTVN------KASPRGTRPERP 195
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
+ F +S IY GNL W + + L+ F +++A+V+++R +GRSRGFGFVT
Sbjct: 196 PPRRSF-ESSLSIYVGNLPWDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMS 254
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ A+ A++G ++GR +++++A +R
Sbjct: 255 DETEMNDAVAALDGESLDGRAIKVSVAEDR 284
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 127/206 (61%), Gaps = 15/206 (7%)
Query: 99 EEEEEPKVAASDEAAR---------LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E+E V D+A R ++VGNLP+++ S+ LA +F AGTV E++YD++
Sbjct: 15 EFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKL 74
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T RSRGFGFVTM SVEE + A + F+ ++ GRT++ V + P++++
Sbjct: 75 TGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLR-----VTEDSHKDMTLPRVESECD 129
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
F S ++++ GNL W + L+ F ++ AKVI++R TGRSRGFGFVT+ +A +
Sbjct: 130 SF-GSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANE 188
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
+ +A+++++GV++ GR +R+ A R
Sbjct: 189 VNTAIESLDGVDLNGRSIRVTAAEAR 214
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 15/223 (6%)
Query: 73 DGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEV 132
+G E+++D E++ E + E E E E A+L+VGNL Y + S +LA +
Sbjct: 93 EGSVAVEENEDSFESQDAEGDVSEGAEFPE------PSEEAKLFVGNLAYDVDSQALAML 146
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
F +AGTV AE++Y+R TD+SRGFGFVTM +VEEA+ A+ F+ + GR + VN P
Sbjct: 147 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVN-KAAP 205
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY 252
RG R P++ + ++Y GNL W + + L F ++ A+V+++R
Sbjct: 206 RGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRE 257
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TGRSRGFGFVT +L A+ A++G +EGR +R+N+A ER
Sbjct: 258 TGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAEER 300
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 116/187 (62%), Gaps = 12/187 (6%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VA D +LY GNLPYS+ S+ LA + E G+ E++YDR T +SRGF FVTM VE
Sbjct: 208 VAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVE 267
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ I+ DG + GRT++VNF + P+ E + ++ +K++ GNL W
Sbjct: 268 DCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPL------------YPETEYKLFVGNLAW 315
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+TS+ L AFQ ++ A+V+F+ TG+SRG+GFV++ T ++ +AL M+ VE+EGR
Sbjct: 316 TVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGR 375
Query: 286 PLRLNMA 292
LR+++A
Sbjct: 376 TLRVSLA 382
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +++TS SL + F E GTV A +++D T +SRG+GFV+ + E A+ +
Sbjct: 307 KLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAI 366
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
D ++ GRT++V+ + R
Sbjct: 367 MDNVELEGRTLRVSLAQGKR 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
VD+ K+Y GNL + + S L + +V+++R TG+SRGF FVT ED
Sbjct: 211 VDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCN 270
Query: 272 SALDAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ + ++G E GR LR+N +++ P P+ P
Sbjct: 271 AVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYP 302
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
+++VGNLP+ S LA +F +AGTV AE++Y+R TDRSRGFGFVTM ++EE ++A++
Sbjct: 122 VKIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVK 181
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+F G ++ GR + VN P+G + Q+ ++Y GNL W + + L
Sbjct: 182 MFSGYELNGRVLTVN-KAAPKGAQPERPPRPPQS---------FRVYVGNLPWDVDNSRL 231
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F + A+V+++R TGRSRGFGFVT + D+ A+ A++G ++GR +R+N+A
Sbjct: 232 EQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVA 291
Query: 293 NERAPP 298
+R P
Sbjct: 292 AQRPKP 297
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
+++VGNLP+ S LA +F +AGTV AE++Y+R TDRSRGFGFVTM ++EE ++A++
Sbjct: 124 VKIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVK 183
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+F G ++ GR + VN P+G + Q+ ++Y GNL W + + L
Sbjct: 184 MFSGYELNGRVLTVN-KAAPKGAQPERPPRPPQS---------FRVYVGNLPWDVDNSRL 233
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F + A+V+++R TGRSRGFGFVT + D+ A+ A++G ++GR +R+N+A
Sbjct: 234 EQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVA 293
Query: 293 NERAPP 298
+R P
Sbjct: 294 AQRPKP 299
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 150/269 (55%), Gaps = 24/269 (8%)
Query: 32 LPSLFKTKSPKPLKLEKAQN-PSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQE 90
+ S F + + KP+K+ + + PS + L + S F +Q +Q+
Sbjct: 21 IKSPFISITSKPIKVVFSTSFPSWVSLKTSNFSTFNTIPLV---------AQTSDWAQQD 71
Query: 91 EEEE----EEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
EE+ EE+ + E E A+LYVGNLPY + S +LA++F +AGTV AEI+Y
Sbjct: 72 EEDTVTLGEESFGDGSEETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIY 131
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
+R TD+SRGFGFVTM +V+EA++AI F + GR + VN PRG P+ +
Sbjct: 132 NRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVN-KAAPRGSR-----PERPS 185
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
++ ++IY GNL W + L F +++A+V+ +R TGRSRGFGFVT +
Sbjct: 186 VFK----IAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSS 241
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
+L A+ A++G ++GR + +N+A ER
Sbjct: 242 ETELNDAIAALDGQSLDGRAITVNIAQER 270
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNLPY + S LA +F AG V AE++Y+R TDRSRGFGFVTM +VEEA++A
Sbjct: 46 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 105
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGG-ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ L +G + GR + VN PRG ERA +G + ++Y GNL W + +
Sbjct: 106 VELLNGYDMDGRQLTVN-KAAPRGSPERAP---------RGDFEPSCRVYVGNLPWDVDT 155
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F ++SA+V+ +R TGRSRGFGFVT + ++ A+ A++G ++GR +R+
Sbjct: 156 SRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRV 215
Query: 290 NMANER 295
N+A ER
Sbjct: 216 NVAEER 221
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 209 QGFVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
QGF + P K++ GNL + + S+ L F + A+VI+ R T RSRGFGFVT T
Sbjct: 39 QGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMST 98
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
E+ + A++ +NG +++GR L +N A R P
Sbjct: 99 VEEAEKAVELLNGYDMDGRQLTVNKAAPRGSP 130
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 118/185 (63%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y++ T +SRGFGFVTM ++EEA +A
Sbjct: 109 EEAKVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKA 168
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I +F+ I GR + VN R R G +++ + F + + Y GNL W
Sbjct: 169 IEMFNRYDISGRLLNVN-----RASPR---GTRMERPPRQFAPA-FRAYVGNLPWQADDS 219
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +++A V+++R TGRSRGFGFVT + E+L A+ A++G E++GRPLR+N
Sbjct: 220 RLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVN 279
Query: 291 MANER 295
+A ER
Sbjct: 280 VAAER 284
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 18/206 (8%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E E AVE EE KV YVGNLPY + S LA++F +AG V AE++Y++
Sbjct: 97 EGEGEYAAVEPPEEAKV---------YVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKE 147
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T +SRGFGFVTM ++EEA +AI +F+ I GR + VN R R G +++ +
Sbjct: 148 TGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVN-----RASPR---GTRMERPPR 199
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
F + + Y GNL W L F +++A V+++R TGRSRGFGFVT + E+
Sbjct: 200 QFAPA-FRAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEE 258
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
L A+ A++G E++GRPLR+N+A ER
Sbjct: 259 LDDAISALDGQELDGRPLRVNVAAER 284
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 124/195 (63%), Gaps = 15/195 (7%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E P+V A A +LYVGN+P ++T+ L ++FA GTV AE++YD+ T+RSR FGFVTM
Sbjct: 59 EAPEVVA---ARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTM 115
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY----QGFVDSPHK 217
+VEEA A+ +G+++GGR +KVN E + P + S FVDS +K
Sbjct: 116 STVEEANAAVEALNGTEVGGRKIKVNVTE--------SFLPNIDRSAPESEPVFVDSQYK 167
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y GNL +T++ L++ F + +LSA V T +S+G+GFVTF + E++++A+
Sbjct: 168 VYVGNLAKNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATF 227
Query: 278 NGVEVEGRPLRLNMA 292
N E+EG+P+R+N A
Sbjct: 228 NNAELEGQPIRVNRA 242
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V + K+Y GN+ +T+ LRD F + A+V++++YT RSR FGFVT T E+
Sbjct: 63 VVAARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEAN 122
Query: 272 SALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
+A++A+NG EV GR +++N+ P + +A E++
Sbjct: 123 AAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPESE 158
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 116/187 (62%), Gaps = 12/187 (6%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VA D +LY GNLPYS+ S+ LA + E G+ E++YDR T +SRGF FVTM VE
Sbjct: 106 VAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVE 165
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ I+ DG + GRT++VNF + P+ E + ++ +K++ GNL W
Sbjct: 166 DCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPL------------YPETEYKLFVGNLAW 213
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+TS+ L AFQ ++ A+V+F+ TG+SRG+GFV++ T ++ +AL M+ VE+EGR
Sbjct: 214 TVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGR 273
Query: 286 PLRLNMA 292
LR+++A
Sbjct: 274 TLRVSLA 280
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +++TS SL + F E GTV A +++D T +SRG+GFV+ + E A+ +
Sbjct: 205 KLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAI 264
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
D ++ GRT++V+ + R
Sbjct: 265 MDNVELEGRTLRVSLAQGKR 284
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
VD+ K+Y GNL + + S L + +V+++R TG+SRGF FVT ED
Sbjct: 109 VDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCN 168
Query: 272 SALDAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ + ++G E GR LR+N +++ P P+ P
Sbjct: 169 AVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYP 200
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGNLP+ + S LA++F AG V AE++Y+R TDRSRGFGFVTM +VEEA++A
Sbjct: 109 EDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 168
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ L+ ++ GR + VN PRG R P+ Y+ ++Y GNL W +
Sbjct: 169 VELYHKFEVNGRFLTVN-KAAPRGS-RPERAPR---EYE----PSFRVYVGNLPWDVDDA 219
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +LSA+V+ +R TGRSRGF FVT + ++ A+ A++G +EGR +R+N
Sbjct: 220 RLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIGALDGQTLEGRAIRVN 279
Query: 291 MANER 295
+A ER
Sbjct: 280 VAEER 284
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 117/187 (62%), Gaps = 15/187 (8%)
Query: 109 SDEA---ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
SDE+ +LY GNLPYS+ S+ LA + + G+ E++YDR T +SRGF FVTM +E
Sbjct: 106 SDESFASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIE 165
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ I DG + GRT++VNF P+ E + ++ HK++ GNL W
Sbjct: 166 DCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPL------------YPETEHKLFVGNLSW 213
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T++ L AFQ ++ A+V+++ TGRSRG+GFV F T E++++AL A+N VE+EGR
Sbjct: 214 SVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGR 273
Query: 286 PLRLNMA 292
+R+++A
Sbjct: 274 AMRVSLA 280
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+T+ L + F E GTV A ++YD T RSRG+GFV + EE + A+
Sbjct: 205 KLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGA 264
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
+ ++ GR ++V+ E R
Sbjct: 265 LNDVELEGRAMRVSLAEGKR 284
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
Q+S + F + K+Y GNL + + S L Q +V+++R TG+SRGF FVT
Sbjct: 104 QDSDESFAST--KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTM 161
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
ED + ++ ++G E GR LR+N +N+ P AKE
Sbjct: 162 SCIEDCNAVIENLDGKEYLGRTLRVNFSNK------PKAKE 196
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 9/186 (4%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E A+L+VGNLPY + S LA +F +AGTV AE++Y+R TDRSRGFGFVTM +VEEA++
Sbjct: 149 NEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 208
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
A+ F+ + GR + VN PRG + Q ++ +IY GNL W + +
Sbjct: 209 AVDTFNRYDLSGRLLTVN-KAAPRGSRQEREPRPFQPTF--------RIYVGNLPWDVDN 259
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F ++ A+V+++R +GRSRGFGFVT + A+ A++G ++GR +R+
Sbjct: 260 GRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRV 319
Query: 290 NMANER 295
N+A ER
Sbjct: 320 NVAEER 325
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A RLYVGN+P ++T+ LA++ E G V AE++YD+ + RSR F FVTM +VE+A I
Sbjct: 69 ARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVI 128
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G++IGGR VKVN E P P LQ F+DSPHK+Y GNL +T+
Sbjct: 129 EKLNGTEIGGREVKVNVTEKPLSTPDL---PLLQAEESEFIDSPHKVYVGNLAKTVTTDT 185
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L++ F + +LSAKV T +S G+GFVTF + ED+++A+ + N +EG+ +R+N
Sbjct: 186 LKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEGQTIRVNK 245
Query: 292 A 292
A
Sbjct: 246 A 246
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S ++Y GN+ +T++ L Q + A+V++++Y+GRSR F FVT +T ED +
Sbjct: 68 SARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAV 127
Query: 274 LDAMNGVEVEGRPLRLNMANE-RAPPVLP 301
++ +NG E+ GR +++N+ + + P LP
Sbjct: 128 IEKLNGTEIGGREVKVNVTEKPLSTPDLP 156
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E VA SD AAR LYVGN+P ++ S+ LA + E G V AE++YD+ + RSR F FVTM
Sbjct: 59 EAPVATSDVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTM 118
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+VE+A AI +G++IGGR +KVN E P ++ LQ F+DSPHK+Y G
Sbjct: 119 KTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSL---LQAEESQFIDSPHKVYVG 175
Query: 222 NLGWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL +T+ L F + G +LSAKV T +S GFGFV+F + ED+++A+ + N
Sbjct: 176 NLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCNNA 235
Query: 281 EVEGRPLRLNMA 292
++G+ +R+N A
Sbjct: 236 FLDGQRIRVNKA 247
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 9/186 (4%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E A+L+VGNLPY + S LA +F +AGTV AE++Y+R TDRSRGFGFVTM +VEEA++
Sbjct: 143 NEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 202
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
A+ F+ + GR + VN PRG + Q ++ +IY GNL W + +
Sbjct: 203 AVDTFNRYDLSGRLLTVN-KAAPRGSRQEREPRPFQPTF--------RIYVGNLPWDVDN 253
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F ++ A+V+++R +GRSRGFGFVT + A+ A++G ++GR +R+
Sbjct: 254 GRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRV 313
Query: 290 NMANER 295
N+A ER
Sbjct: 314 NVAEER 319
>gi|148908208|gb|ABR17219.1| unknown [Picea sitchensis]
Length = 296
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 155/284 (54%), Gaps = 20/284 (7%)
Query: 8 MAASSSLC---NKLYNLQ-AITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLS 63
MAASS C N NL + +P+ +PS+ K P L+ + HL L S +
Sbjct: 1 MAASSCYCAPANTHLNLNYRLNSLPSLRIPSV-KISMPPHFSLQLS------HL-LASRN 52
Query: 64 YFRQFSASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYS 123
FR + + + Q TE S+ E E E++ +++ ++ E + + +LYVGNLP S
Sbjct: 53 VFRITALTQEEIQTTEQSEPEEEETNAEQQPKDSTRQKPENEEKSPSNRTKLYVGNLPRS 112
Query: 124 MTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRT 183
S+ L +F E GTV SAE+V + T SRGF FVTM +V EAK AI GS +GGR
Sbjct: 113 CDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMSTVIEAKAAIEKLQGSDLGGRD 172
Query: 184 VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLL 243
+ VNFP AA+ + + +V++P++++AGNL W + ++ LRD F +L
Sbjct: 173 MIVNFP--------AAVLSRGNKTEDEYVETPYQLFAGNLAWSVKNEILRDLFSEHGTVL 224
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
AKV++ G R FGFV + ++++A+ ++NG E GR L
Sbjct: 225 GAKVVYNSKGGVPRAFGFVCLSSQSEMEAAIVSLNGKEFHGRNL 268
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 153/280 (54%), Gaps = 30/280 (10%)
Query: 32 LPSLFKTKSPKPLKL--EKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQ 89
LPSLF SP+ + NP+ S S+S S S S E +Q
Sbjct: 10 LPSLFTKNSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFISRVAVSS---EFDQ 66
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
EE+ ++ ++ P + + RL+VGNLP+S+ S+ LAE+F AG V E++YD+
Sbjct: 67 EEDTFDDG---DDTPSYSPN---QRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKS 120
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN-------------FPEVPR-GG 195
T RSRGFGFVTM S E + A + +G + GR ++VN F E PR GG
Sbjct: 121 TGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGG 180
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
+R P+ G D ++++ GNL WG+ + L F Q +L AKVI++R +GR
Sbjct: 181 DRPRGPPR-----GGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
SRGFGFVTF +A+++ SA+ ++G ++ GR +R++ A+ R
Sbjct: 236 SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSR 275
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 118/187 (63%), Gaps = 10/187 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A+L+VGN P+ + S LA +F +AGTV AE++Y+R TD SRGFGFVTM +VEEA+ A
Sbjct: 107 EDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESA 166
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGG--ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+ F+G GR++ VN P+G ER P+ +++ + +IY NL W +
Sbjct: 167 VEKFNGYDYNGRSLVVN-KASPKGSRPERTERAPR---TFEPVL----RIYVANLAWEVD 218
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L F ++SA+V+++R TGRSRGFGFVT ++ A+ A++G +EGR +R
Sbjct: 219 NSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAALDGQSLEGRTIR 278
Query: 289 LNMANER 295
+++A +R
Sbjct: 279 VSVAEDR 285
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 126/203 (62%), Gaps = 14/203 (6%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
EEEE+++ +P A + +LY GNLPY++ S++LA++ + E++Y+R
Sbjct: 65 EEEEKDDGASAVLDPPAAVN---TKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRD 121
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T +SRGF FVTM +VE+ I DG++ GR +KVNF + P+ N
Sbjct: 122 TGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPK-----------PNKEP 170
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+ ++ HK++ GNL W +TS+ L AF+ ++ A+V+F+ TGRSRG+GFV + + +
Sbjct: 171 LYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAE 230
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
+++AL++++G E+EGR +R+N+A
Sbjct: 231 METALESLDGFELEGRAIRVNLA 253
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +++TS SLA F E G V A +V+D T RSRG+GFV S E + A+
Sbjct: 178 KLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALES 237
Query: 174 FDGSQIGGRTVKVNFPE 190
DG ++ GR ++VN +
Sbjct: 238 LDGFELEGRAIRVNLAQ 254
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + + S L Q P L+ +V++ R TG+SRGF FVT ED +
Sbjct: 86 KLYFGNLPYNVDSATLAQIIQDFANPELV--EVLYNRDTGQSRGFAFVTMSNVEDCNIII 143
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
D ++G E GR L++N A++ P P ET+
Sbjct: 144 DNLDGTEYLGRALKVNFADKPKPNKEPLYPETE 176
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 123/196 (62%), Gaps = 31/196 (15%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM SVEE + A+
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 174 FDGSQIGGRTVKVN------------FPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
F+G + GR+++VN P+ PRG +++Y G
Sbjct: 142 FNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRG-------------------DANRVYVG 182
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL WG+ + L + F Q +L A++I++R +GRSRGFGFVT+ +AE++++A+ ++G +
Sbjct: 183 NLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGAD 242
Query: 282 VEGRPLRLNMANERAP 297
++GR +R+ +A + P
Sbjct: 243 LDGRQIRVTVAESKPP 258
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 123/196 (62%), Gaps = 31/196 (15%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM SVEE + A+
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143
Query: 174 FDGSQIGGRTVKVN------------FPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
F+G + GR+++VN P+ PRG +++Y G
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRG-------------------DANRVYVG 184
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL WG+ + L + F Q +L A++I++R +GRSRGFGFVT+ +AE++++A+ ++G +
Sbjct: 185 NLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGAD 244
Query: 282 VEGRPLRLNMANERAP 297
++GR +R+ +A + P
Sbjct: 245 LDGRQIRVTVAESKPP 260
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+++VGNL +S S++LAE+F AG V E++YD++T RSRGFGFVTM S EE + A +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 174 FDGSQIGGRTVKVNFPEVPRGGE----RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
F+G ++ GR ++VN P E R + + G DS +++Y GNL WG+
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQ 207
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F Q ++ AKV+++R +GRSRGFGFVT+ +AE++ +A+++++GV++ GR +R+
Sbjct: 208 DALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267
Query: 290 NMANERAP 297
+ A R P
Sbjct: 268 SPAEARPP 275
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +L+VGNLP+++ + L E+F AG V I+ DR T SRGFGFVTMG+VEEA++
Sbjct: 111 EGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKG 170
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ LF+ + GR + VN + A G K++ Q S +KIY GNL W
Sbjct: 171 VELFNRHSLEGRLLTVN--------KAAPRGTKVERPSQAG-SSTNKIYVGNLPWQADDN 221
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +L A+V+++R TGRSRGFGFVT+ + ++ A+ A++G +++GRPLR+N
Sbjct: 222 SLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVN 281
Query: 291 MANER 295
+A +R
Sbjct: 282 IAEDR 286
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E P A S ++YVGNLP+ +SL ++F+E G V A +VYDR T RSRGFGFVT
Sbjct: 197 ERPSQAGS-STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTY 255
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
S E +AI DG+ + GR ++VN E R G
Sbjct: 256 SSESEVNDAIAALDGTDMDGRPLRVNIAEDRRRG 289
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 211 FVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
FV+ P K++ GNL + L +Q L + F+G +L +I +R TG SRGFGFVT T E
Sbjct: 106 FVELPEGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVE 165
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSI 312
+ + ++ N +EGR L +N A R V ++ + N I
Sbjct: 166 EAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKI 209
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 130/208 (62%), Gaps = 17/208 (8%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
PET + EEEE ++ +P A + +LY GNLPY++ S++LA++ + E+
Sbjct: 57 PETINVKLEEEE---KDLDPPAAIN---TKLYFGNLPYNVDSATLAQIIQDFANPELVEV 110
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+Y+R T +SRGF FVTM +VE+ I DG++ GR +KVNF + P+
Sbjct: 111 LYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPK----------- 159
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
N + ++ HK++ GNL W +TS+ L +AF+ ++ A+V+++ TGRSRG+GFV +
Sbjct: 160 PNKEPLYPETEHKLFVGNLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCY 219
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ ++++AL++++G E+EGR +R+N+A
Sbjct: 220 SSKAEMETALESLDGFELEGRAIRVNLA 247
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + + S L Q +V++ R TG+SRGF FVT ED +D
Sbjct: 80 KLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDN 139
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G E GR L++N A++ P P ET+
Sbjct: 140 LDGTEYLGRALKVNFADKPKPNKEPLYPETE 170
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 256
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 3/185 (1%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+S+ A RLY+GN+P ++ + L ++ E G V AE++YD+ + RSR F FVTM +VE+A
Sbjct: 75 SSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDA 134
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
I +G+QIGGR +KVN E P + LQ FVDSPHK+Y GNL +
Sbjct: 135 NAVIEKLNGTQIGGREIKVNITEKPLASGDLSF---LQLEESQFVDSPHKVYVGNLAKTV 191
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
TS+ L++ F + +LSAKV T +S G+GFV+F ED+++A+ + N +EG+ +
Sbjct: 192 TSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLEGQKI 251
Query: 288 RLNMA 292
R+N A
Sbjct: 252 RVNKA 256
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGN+P ++++ L ++ E G V AE++YD+ + RSR F FVTM +VE+A A
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G++IGGR +KVN E P E G +Q FVDSP+K+Y GNL +TS L+
Sbjct: 121 LNGTEIGGREIKVNITEKPLTTE----GLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLK 176
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F + LSAKV T +S GFGFVTF + ED+++A+ + N +EG+ +R+N A
Sbjct: 177 KFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNKA 235
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 207 SYQGFVDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
S Q VDSP K+Y GN+ +++ L Q + A+V++++Y+ RSR F FVT
Sbjct: 49 SEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTM 108
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNM 291
+T ED +A + +NG E+ GR +++N+
Sbjct: 109 KTVEDANAAAEKLNGTEIGGREIKVNI 135
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 7/194 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRGFGFVTM +VEE +EA
Sbjct: 75 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 134
Query: 171 IRLFDGSQIGGRTVKVNF-------PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNL 223
+ +G + GRT+KVN PRG + G Q S +G +++Y GNL
Sbjct: 135 VEQLNGYVLDGRTIKVNSGPPPPRDQSSPRGFREQSSGGFRQQSSRGPSGGDNRVYVGNL 194
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
W + L + F Q +L A+VI++R +GRSRGFGFVT+ ++E+++ A+ ++G +++
Sbjct: 195 SWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSNLDGTDLD 254
Query: 284 GRPLRLNMANERAP 297
GR +R+ +A R P
Sbjct: 255 GRQIRVTVAEARQP 268
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 9/185 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +L+VGNLP+++ + L E+F AG V I+ DR T SRGFGFVTMG+VEEA++
Sbjct: 111 EWTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKG 170
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ LF+ + GR + VN + A G K++ Q S +KIY GNL W
Sbjct: 171 VELFNRHSLEGRLLTVN--------KAAPRGTKVERPSQAG-SSTNKIYVGNLPWQADDN 221
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F +L A+V+++R TGRSRGFGFVT+ + ++ A+ A++G +++GRPLR+N
Sbjct: 222 SLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVN 281
Query: 291 MANER 295
+A +R
Sbjct: 282 IAEDR 286
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E P A S ++YVGNLP+ +SL ++F+E G V A +VYDR T RSRGFGFVT
Sbjct: 197 ERPSQAGS-STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTY 255
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
S E +AI DG+ + GR ++VN E R G
Sbjct: 256 SSESEVNDAIAALDGTDMDGRPLRVNIAEDRRRG 289
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 211 FVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
FV+ P K++ GNL + L +Q L + F+G +L +I +R TG SRGFGFVT T E
Sbjct: 106 FVELPEWTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVE 165
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSI 312
+ + ++ N +EGR L +N A R V ++ + N I
Sbjct: 166 EAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKI 209
>gi|356557128|ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGN+P ++T+ LA++ E G V AE++YD+ + RSR F FVTM +VE+A I
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G+++GGR +KVN E P P LQ F+DSPHK+Y GNL +T+ L+
Sbjct: 131 LNGTELGGREIKVNVTEKPLSTLDL---PLLQAEESEFIDSPHKVYVGNLAKTVTTDTLK 187
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F + +LSAKV T +S G+GFVTF + ED+++A+ + N +EG+ +R+N A
Sbjct: 188 NFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISSFNNSLLEGQTIRVNKA 246
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +LY GNLPYS+ SS LA + + G E++YDR T +SRGF FVTM S+E+ + I
Sbjct: 101 STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVI 160
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
DGS GR ++VNF + P+ E + ++ +K++ GNL W +TS+
Sbjct: 161 ENLDGSAYMGRILRVNFSDKPKPKEPL------------YPETEYKLFVGNLSWSVTSEI 208
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L AFQ ++ A+VI++ TG+SRG+GFV++ T ++++AL+ +N +E+EGR +R+++
Sbjct: 209 LTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSL 268
Query: 292 A 292
A
Sbjct: 269 A 269
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+TS L + F E G V A ++YD T +SRG+GFV+ + E + A+
Sbjct: 194 KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALET 253
Query: 174 FDGSQIGGRTVKVNFPE 190
+ ++ GR ++V+ E
Sbjct: 254 INELELEGRVIRVSLAE 270
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + + S L Q +V+++R TG+SRGF FVT + ED ++
Sbjct: 103 KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN 162
Query: 277 MNGVEVEGRPLRLNMANERAP--PVLP 301
++G GR LR+N +++ P P+ P
Sbjct: 163 LDGSAYMGRILRVNFSDKPKPKEPLYP 189
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 153/280 (54%), Gaps = 30/280 (10%)
Query: 32 LPSLFKTKSPKPLKL--EKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQ 89
LPSLF SP+ + NP+ S S+S S S S E +Q
Sbjct: 10 LPSLFTKNSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFISRVAVSS---EFDQ 66
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
EE+ ++ ++ P + + RL+VG+LP+S+ S+ LAE+F AG V E++YD+
Sbjct: 67 EEDTFDDG---DDTPSYSPN---QRLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKS 120
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN-------------FPEVPR-GG 195
T RSRGFGFVTM S E + A + +G + GR ++VN F E PR GG
Sbjct: 121 TGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGG 180
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
+R P+ G D ++++ GNL WG+ + L F Q +L AKVI++R +GR
Sbjct: 181 DRPRGPPR-----GGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
SRGFGFVTF +A+++ SA+ ++G ++ GR +R++ A+ R
Sbjct: 236 SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSR 275
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 114/179 (63%), Gaps = 9/179 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A++YVGNLPY + S LA++F +AG V AE++Y+R + +SRGFGFVTM ++EEA +A
Sbjct: 1 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 60
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I F+ I GR + VN R +R G +++ + F S + Y GNL W
Sbjct: 61 IETFNRYDISGRLLNVN-----RAAQR---GSRVERPPRQFA-SSFRAYVGNLPWQAEDS 111
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F +++A V+++R TGRSRGFGFVT + EDL SA+ A++G E++GRPLR+
Sbjct: 112 RLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 170
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GNL + + S+ L F Q G++ A+VI+ R +G+SRGFGFVT T E+ A++
Sbjct: 4 KVYVGNLPYDVDSERLAQLFD-QAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 62
Query: 276 AMNGVEVEGRPLRLNMANERAPPV 299
N ++ GR L +N A +R V
Sbjct: 63 TFNRYDISGRLLNVNRAAQRGSRV 86
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 117/183 (63%), Gaps = 11/183 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNLPY + S LA++F +AG V AE++Y+R T +SRGFGFVTM ++EEA +AI +
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR + VN RAA G +++ + F + + Y GNL W + L
Sbjct: 188 LNRYDINGRLLNVN---------RAAPRGSRVERPPRQFAPA-FRAYVGNLPWQVDDSRL 237
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F +++A V+++R +GRSRGFGFV+ + E+L A+ A++G E++GRPLR+N+A
Sbjct: 238 LQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVA 297
Query: 293 NER 295
ER
Sbjct: 298 AER 300
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 113/182 (62%), Gaps = 12/182 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY GNLPY++ S+ LA + E G+ E++Y R T RSRGF FVTM S+E+ I
Sbjct: 108 KLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIEN 167
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
D SQ GR ++VNF + P+ E + ++ +K++ GNL W TS+ L
Sbjct: 168 LDESQYMGRILRVNFSDNPKPKEPL------------YPETEYKLFVGNLSWSATSESLT 215
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
AFQ ++ A+V+++ TG+SRG+GFV + T ++Q+AL +++GVE+EGR LR+++A
Sbjct: 216 QAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAE 275
Query: 294 ER 295
R
Sbjct: 276 GR 277
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + + S L Q G P ++ +V++ R TGRSRGF FVT + ED + +
Sbjct: 108 KLYFGNLPYNVDSAQLAGIIQEYGSPEMV--EVLYHRETGRSRGFAFVTMSSIEDCNAVI 165
Query: 275 DAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ ++ + GR LR+N ++ P P+ P
Sbjct: 166 ENLDESQYMGRILRVNFSDNPKPKEPLYP 194
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 117/183 (63%), Gaps = 11/183 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNLPY + S LA++F +AG V AE++Y+R T +SRGFGFVTM ++EEA +AI +
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR + VN RAA G +++ + F + + Y GNL W + L
Sbjct: 189 LNRYDINGRLLNVN---------RAAPRGSRVERPPRQFAPA-FRAYVGNLPWQVDDSRL 238
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F +++A V+++R +GRSRGFGFV+ + E+L A+ A++G E++GRPLR+N+A
Sbjct: 239 LQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVA 298
Query: 293 NER 295
ER
Sbjct: 299 AER 301
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 132/208 (63%), Gaps = 7/208 (3%)
Query: 97 AVEEEEEPKVAAS-DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
AV + E +VA E R++VGNLP+S+ S+ LA +F +AG+V E++YD++T RSRG
Sbjct: 57 AVSSDVETEVAEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRG 116
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRG-----GERAAMGPKLQNSYQ 209
FGFVTM +VEE +EA+ +G + GR +KVN P P+ G R G Q S +
Sbjct: 117 FGFVTMSTVEEVEEAVERLNGYVLDGRALKVNSGPPPPKDQSSPRGFREQSGGFRQQSSR 176
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
G +++Y GNL W + L + F Q +L A+VI++R +GRSRGFGFVT+ T+++
Sbjct: 177 GPSGGDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDE 236
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAP 297
+Q A+ ++G +++GR +R+ +A R P
Sbjct: 237 VQKAVSNLDGTDMDGRQIRVTVAEARQP 264
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 118/184 (64%), Gaps = 11/184 (5%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A++YVGNLPY + S LA++F +AG V AE++Y+R T +SRGFGFVTM ++EEA +AI
Sbjct: 16 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIE 75
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ + I GR + VN RAA G +++ + F + + Y GNL W +
Sbjct: 76 MLNRYDINGRLLNVN---------RAAPRGSRVERPPRQFAPA-FRAYVGNLPWQVDDSR 125
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L F +++A V+++R +GRSRGFGFV+ + E+L A+ A++G E++GRPLR+N+
Sbjct: 126 LLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNV 185
Query: 292 ANER 295
A ER
Sbjct: 186 AAER 189
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GNL + + S+GL F+ Q G++ A+VI+ R TG+SRGFGFVT T E+ A++
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFE-QAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIE 75
Query: 276 AMNGVEVEGRPLRLNMANERAPPV 299
+N ++ GR L +N A R V
Sbjct: 76 MLNRYDINGRLLNVNRAAPRGSRV 99
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 4/177 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGN+P ++++ L ++ E G V AE++YD+ + RSR F FVTM +VE+A A
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G++IGGR +KVN E P E G +Q FVDSP+K+Y GNL +TS L+
Sbjct: 121 LNGTEIGGREIKVNITEKPLTTE----GLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLK 176
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
F + LSAKV T +S GFGFVTF + ED+++A+ + N +EG+ +R+N
Sbjct: 177 KFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVN 233
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 207 SYQGFVDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
S Q VDSP K+Y GN+ +++ L Q + A+V++++Y+ RSR F FVT
Sbjct: 49 SEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTM 108
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNM 291
+T ED +A + +NG E+ GR +++N+
Sbjct: 109 KTVEDANAAAEKLNGTEIGGREIKVNI 135
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 142/285 (49%), Gaps = 31/285 (10%)
Query: 33 PSLFKTKSPKPL-----KLEKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPET 87
PSLF TKS P K K QNPS S + VT +Q
Sbjct: 20 PSLFYTKSKSPFISNSAKPFKVQNPSYNSSKFSSSVSLVSKRRTRHSSLVTFVAQTSDWA 79
Query: 88 EQEEEEEEEAVEEEEEPKVAAS-----------------DEAARLYVGNLPYSMTSSSLA 130
+QEE+E+ E + + E +++VGNLP+ + S LA
Sbjct: 80 QQEEKEDGATWENQADATWVGETESNENEEVEVASFEEPSEDLKIFVGNLPFDVDSEKLA 139
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
++F ++GTV AE++Y+R TDRSRGFGFVTM + EE + A+ F G ++ GR + VN
Sbjct: 140 QLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAVNKFSGFELDGRLLTVN-NA 198
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
PRG R P+ NS G + Y GNL W + + L F + SA+V+++
Sbjct: 199 APRGTPRLRQ-PRTFNS--GL-----RAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYD 250
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
R TGR RGFGFVT ++ A+ A++G GR +R+N+A ER
Sbjct: 251 RETGRLRGFGFVTMSNEAEMNDAIAALDGQSFNGRAIRVNVAEER 295
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
KI+ GNL + + S+ L F+ + A+VI+ R T RSRGFGFVT T+E+++ A++
Sbjct: 123 KIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAVNK 182
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETKTENS 311
+G E++GR L +N A AP P ++ +T NS
Sbjct: 183 FSGFELDGRLLTVNNA---APRGTPRLRQPRTFNS 214
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 26/288 (9%)
Query: 8 MAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNP-SALHLS--LLSLSY 64
MAASS C + A T + NH ++ +K+ + P +L LS L
Sbjct: 1 MAASSCYC-----IPANTHLNLNHKTNVLPLLRMSSVKI--SMRPRCSLQLSHVLARRKV 53
Query: 65 FRQFSASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSM 124
FR + + + Q+TE Q PE E+ +E + EEE P+ +LYVGNLP S
Sbjct: 54 FRITALAQEETQITE--QSVPEEEETNKERQPKNEEELPPR------RTKLYVGNLPRSC 105
Query: 125 TSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTV 184
+ L ++F E GTV S E+V + T SRGF FVTM +V+EAK AI GS +GGR +
Sbjct: 106 DIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTMSTVKEAKSAIEKLQGSDLGGRDM 165
Query: 185 KVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLS 244
VNFP A + K + + ++++P++++ GNL W + + L+ F + +
Sbjct: 166 IVNFP--------AKVLSKKKETDDSYIETPYQLFVGNLAWSVKKEILKSLFSQHGNVSA 217
Query: 245 AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AKVI+ G R FGFV + +++ A+ +++G E GR L++ A
Sbjct: 218 AKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKVRQA 265
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+ L +F++ G V++A+++Y R FGFV + S E ++AI
Sbjct: 190 QLFVGNLAWSVKKEILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVS 249
Query: 174 FDGSQIGGRTVKVNFPE------VPRGGERAAMGPK--LQNSYQ-----GFVDSPHKIYA 220
G + GR +KV V E P +++S FV S + +Y
Sbjct: 250 LHGKEFHGRNLKVRQARPTSKDMVVSDVEENIAKPSTMVEDSMTETVKATFVGSAYGVYV 309
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + ++ L + F +L A+V++ R GRSR +GFV F + ++++A+ A++
Sbjct: 310 SNLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQAEVEAAIAALDKK 369
Query: 281 EVEGRPL 287
E R L
Sbjct: 370 EFYERKL 376
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL S+ + +L+E+F++ G V A ++Y R RSR +GFV S E + AI
Sbjct: 307 VYVSNLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQAEVEAAIAAL 366
Query: 175 DGSQIGGRTVKV 186
D + R + V
Sbjct: 367 DKKEFYERKLVV 378
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 113/179 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+++VGNLP+S+ S+ LAE+F ++G V E++YDR T RSRGF FVTM + +A EA+
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
F+G + GRT++VN P A G G +S ++++ GNL WG L
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLE 233
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F ++ AKV+++R TGRSRGFGFVT + ++++ A+ +++G +++GR +++ +A
Sbjct: 234 QLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLA 292
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 113/181 (62%), Gaps = 12/181 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LY GNLPYS+ S+ LA + + G+ E++YDR + +SRGF FVTM +E+ I
Sbjct: 109 ATKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVI 168
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
DG + GRT++VNF P+ E + ++ HK++ GNL W +T++
Sbjct: 169 ENLDGKEFLGRTLRVNFSSKPKPKEPL------------YPETEHKLFVGNLSWSVTNEI 216
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L AFQ ++ A+V+++ TGRSRG+GFV + T ++++A+ A+N VE+EGR +R+++
Sbjct: 217 LTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSL 276
Query: 292 A 292
A
Sbjct: 277 A 277
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+T+ L + F E GTV A ++YD T RSRG+GFV + E + A+
Sbjct: 202 KLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAA 261
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERA 198
+ ++ GR ++V+ + G+RA
Sbjct: 262 LNDVELEGRAMRVSLAQ----GKRA 282
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S K+Y GNL + + S L Q +V+++R +G+SRGF FVT ED +
Sbjct: 108 SATKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAV 167
Query: 274 LDAMNGVEVEGRPLRLNMANERAP--PVLP 301
++ ++G E GR LR+N +++ P P+ P
Sbjct: 168 IENLDGKEFLGRTLRVNFSSKPKPKEPLYP 197
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 121/183 (66%), Gaps = 8/183 (4%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LYVGN+P ++T+ LA +FA+ GTV AE+++D+ T RSR FGFVTM + EEA AI
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAI 128
Query: 172 RLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +++GGR +KVN E +P +R+A P+ FVDS +K+Y GNL +T+
Sbjct: 129 ESLNETEVGGRKIKVNVTESFLP-NIDRSAPEPE-----PVFVDSQYKVYVGNLAKSVTT 182
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ L++ F + +LSA V T +S+G+GFVTF + E++Q+A+ N E+EG+P+R+
Sbjct: 183 EMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRV 242
Query: 290 NMA 292
N A
Sbjct: 243 NKA 245
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ L F + A+V+F++YTGRSR FGFVT T E+ +A++
Sbjct: 70 RKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIE 129
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
++N EV GR +++N+ P + +A E
Sbjct: 130 SLNETEVGGRKIKVNVTESFLPNIDRSAPE 159
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EP+ D ++YVGNL S+T+ L F+E G V SA + T +S+G+GFVT
Sbjct: 159 EPEPVFVDSQYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFS 218
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVN 187
S EE + A+ F+ +++ G+ ++VN
Sbjct: 219 SEEEVQAAVSTFNNAELEGQPIRVN 243
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 12/187 (6%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VA D +LY GNLPYS+ S+ LA + E G+ E++YDR T +SRGF FVTM VE
Sbjct: 106 VAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVE 165
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ I+ DG + GRT++VNF + P+ E + ++ +K++ GNL W
Sbjct: 166 DCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPL------------YPETEYKLFVGNLAW 213
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T + AFQ ++ A+V+F+ TG+ RG+GFV++ T ++ +AL M+ VE+EGR
Sbjct: 214 TVTFESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTALAIMDNVELEGR 273
Query: 286 PLRLNMA 292
LR+++A
Sbjct: 274 TLRVSLA 280
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +++T S + F E GTV A +++D T + RG+GFV+ + E A+ +
Sbjct: 205 KLFVGNLAWTVTFESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTALAI 264
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
D ++ GRT++V+ + R
Sbjct: 265 MDNVELEGRTLRVSLAQGKR 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
VD+ K+Y GNL + + S L + +V+++R TG+SRGF FVT ED
Sbjct: 109 VDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCN 168
Query: 272 SALDAMNGVEVEGRPLRLNMANERAP--PVLP 301
+ + ++G E GR LR+N +++ P P+ P
Sbjct: 169 AVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYP 200
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A+L+VGN+PY S LA +F +AG V AE++Y+R TD+SRGFGFVTM +VEEA+ A+
Sbjct: 30 AKLFVGNIPYD-DSEKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVE 88
Query: 173 LFDGSQIGGRTVKVNFPEVPRGG--ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ I GR + VN PRG ER P+ D ++Y GNL W +
Sbjct: 89 MLHRYDINGRNLTVN-KAAPRGSRPER----PRES-------DPSLRVYVGNLPWQVDDS 136
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L F ++ A+V+++R +GRSRGFGFVT T E++ A+ A++G +EGR LR+N
Sbjct: 137 RLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDAIAALDGQSLEGRALRVN 196
Query: 291 MANER 295
+A ER
Sbjct: 197 VAEER 201
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
SD + R+YVGNLP+ + S L ++F+E G V A +VYDR + RSRGFGFVT+ + EE
Sbjct: 118 SDPSLRVYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVD 177
Query: 169 EAIRLFDGSQIGGRTVKVNFPE 190
+AI DG + GR ++VN E
Sbjct: 178 DAIAALDGQSLEGRALRVNVAE 199
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 142/278 (51%), Gaps = 21/278 (7%)
Query: 32 LPSLFKTKSPKPLKLEKAQNPSALHLSL-------LSLSYFRQ---FSASFDGFQVTEDS 81
+ +LF K+ KP P H+SL LSL R F+A TE+
Sbjct: 15 IAALFHNKT-KPTSFSLPSKPFKFHISLNSSPSLTLSLKTNRATPLFAAQEGETLTTEEG 73
Query: 82 QDEPE----TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
E E E E E E E+ A E A+L+VGNLPY + S LA +F AG
Sbjct: 74 VVETEGLIDWEPEAAENETGGEDYAGGDFAEPSEDAKLFVGNLPYDVDSEKLAMLFEPAG 133
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER 197
TV AE++Y+R TD+SRGFGFVTM +VEEA+ F+ GR + VN PRG
Sbjct: 134 TVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAAKFNRYDYNGRPLTVN-KAAPRGSRP 192
Query: 198 AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
+ + ++Y GNL W L L F ++SA+V+++R TGRSR
Sbjct: 193 EREERPPRT-----FEPVLRVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSR 247
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GFGFVT +++ A+ A++G +EGR +++++A +R
Sbjct: 248 GFGFVTMSDEKEMNDAIAALDGQILEGRTIKVSVAEDR 285
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 118/195 (60%), Gaps = 15/195 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNLP++ S+ LAE+ + +V + ++VYD+ + RSRGF FVTM + E A+ I
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 174 FDGSQIGGRTVKVNFPEVPR-------------GGERAAMGPKLQNSYQGFVDSPHKIYA 220
DGS GGR +KV+FP+ PR G+R + P Q S + +D+ +K++
Sbjct: 61 LDGSDFGGRPLKVSFPQ-PRENRDNKPRFGNNERGDRRSDRPPRQGSDR-VLDNTNKMFI 118
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL W + L F ++ AKV+++R TG+SRGFGFVT A ++ +A+ ++G
Sbjct: 119 GNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGA 178
Query: 281 EVEGRPLRLNMANER 295
E EGR +R++ A ER
Sbjct: 179 EFEGREMRVSEAGER 193
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D ++++GNL +S + +L +VF+E G+V A++VYDR T +SRGFGFVTM + E
Sbjct: 111 DNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSN 170
Query: 170 AIRLFDGSQIGGRTVKV 186
A++ DG++ GR ++V
Sbjct: 171 AVQNLDGAEFEGREMRV 187
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY GNLPYS+ S+ LA + E G+ E++YDR + +SRGF FVTM VE+ I
Sbjct: 102 KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIEN 161
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DG + GRT++VN + P+ E + ++ HK++ GNL W +TS+ L
Sbjct: 162 LDGKEFLGRTLRVNLSDKPKPKEPL------------YPETEHKLFVGNLSWTVTSESLI 209
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
FQ ++ A+V+++ TGRSRG+GFV + +L++AL ++N VE+EGR +R+++A
Sbjct: 210 QVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETALISLNNVELEGRAIRVSLA 268
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +++TS SL +VF E GTV A ++YD T RSRG+GFV E + A+
Sbjct: 193 KLFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETALIS 252
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
+ ++ GR ++V+ E R
Sbjct: 253 LNNVELEGRAIRVSLAEGKR 272
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + + S L + +V+++R +G+SRGF FVT ED + ++
Sbjct: 102 KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIEN 161
Query: 277 MNGVEVEGRPLRLNMANERAP--PVLP 301
++G E GR LR+N++++ P P+ P
Sbjct: 162 LDGKEFLGRTLRVNLSDKPKPKEPLYP 188
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 116/181 (64%), Gaps = 8/181 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGN+P ++T+ L +FA+ GTV A+++YD+ + RSR FGFVTM SVEEA AI
Sbjct: 70 KLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIES 129
Query: 174 FDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +++GGR +KVN E +P + P FVDS +K+Y GNL +T++
Sbjct: 130 LNETEVGGRKIKVNVTESFLPN------IDPSAPEPEPAFVDSQYKVYVGNLAKTVTTEV 183
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L++ F + +LSA V T +S+G+GFVTF + E++++A+ N E+EG+P+R+N
Sbjct: 184 LKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQPIRVNR 243
Query: 292 A 292
A
Sbjct: 244 A 244
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ LR F +L A V++++Y+GRSR FGFVT + E+ +A++
Sbjct: 69 RKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIE 128
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
++N EV GR +++N+ P + P+A E
Sbjct: 129 SLNETEVGGRKIKVNVTESFLPNIDPSAPE 158
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EP+ A D ++YVGNL ++T+ L F+E G V SA + T +S+G+GFVT
Sbjct: 158 EPEPAFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFS 217
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVN 187
S EE + A+ F+ +++ G+ ++VN
Sbjct: 218 SEEEVEAAVSTFNNTELEGQPIRVN 242
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79314769|ref|NP_001030841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17979394|gb|AAL49922.1| unknown protein [Arabidopsis thaliana]
gi|22136722|gb|AAM91680.1| unknown protein [Arabidopsis thaliana]
gi|332645382|gb|AEE78903.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332645383|gb|AEE78904.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 253
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 121/202 (59%), Gaps = 11/202 (5%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV E EE A +S+ A R+Y+GN+P ++T+ L ++ E G V +++YD+ + RS
Sbjct: 57 AVTETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRS 116
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK---LQNSYQG 210
R FGF TM SVE+A + +G+ + GR +KVN E P A P LQ+
Sbjct: 117 RRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKP-----IASSPDLSVLQSEDSA 171
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
FVDSP+K+Y GNL +T + L + F + ++SAKV T +S GFGFVTF + ED+
Sbjct: 172 FVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDV 231
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
++A+ A+N +EG+ +R+N A
Sbjct: 232 EAAIVALNNSLLEGQKIRVNKA 253
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 95 EEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
EEA EE ++ ++ +LY+ NLP+S++ + E+F + GTV+ EI+ + RSR
Sbjct: 81 EEASEENQD-----VNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQK-NGRSR 134
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
GF FVTM S +EA+ AI+ FD +I GR +KV F +R P + ++
Sbjct: 135 GFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEF------AKRLKKPPPPKPPGPPPGET 188
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+K+Y NL W + S LRD F ++A+V+F+ GRS G+GFV+F T E+ Q+AL
Sbjct: 189 VNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTAL 248
Query: 275 DAMNGVEVEGRPLRLNMA 292
++ G E+ GRPLRL +
Sbjct: 249 SSLEGKELMGRPLRLKFS 266
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NL + + S++L + F+E +A +V+D RS G+GFV+ + EEA+ A+
Sbjct: 191 KLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSS 250
Query: 174 FDGSQIGGRTVKVNFPE 190
+G ++ GR +++ F E
Sbjct: 251 LEGKELMGRPLRLKFSE 267
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 11/202 (5%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV E EE A +S+ A R+Y+GN+P ++++ L ++ E G V +++YD+ + RS
Sbjct: 57 AVTETEEKPAALDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRS 116
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK---LQNSYQG 210
R FGF TM SVE+A + +G+ + GR +KVN E P A P LQ+
Sbjct: 117 RRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKP-----IASSPDLSVLQSEDSA 171
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
FVDSP+K+Y GNL +T + L + F + ++SAKV T +S GFGFVTF + ED+
Sbjct: 172 FVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDV 231
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
++A+ A+N +EG+ +R+N A
Sbjct: 232 EAAVVALNNSLLEGQKIRVNKA 253
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 95 EEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
EEA EE ++ ++ +LY+ NLP+S++ + E+F + GTV+ EI+ + RSR
Sbjct: 75 EEASEENQD-----VNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQK-NGRSR 128
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
GF FVTM S +EA+ AI+ FD +I GR +KV F +R P + ++
Sbjct: 129 GFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEF------AKRLKKPPPPKPPGPPPGET 182
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+K+Y NL W + S LRD F ++A+V+F+ GRS G+GFV+F T E+ Q+AL
Sbjct: 183 VNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTAL 242
Query: 275 DAMNGVEVEGRPLRLNMA 292
++ G E+ GRPLRL +
Sbjct: 243 SSLEGKELMGRPLRLKFS 260
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NL + + S++L + F+E +A +V+D RS G+GFV+ + EEA+ A+
Sbjct: 185 KLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSS 244
Query: 174 FDGSQIGGRTVKVNFPE 190
+G ++ GR +++ F E
Sbjct: 245 LEGKELMGRPLRLKFSE 261
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A RLYVGN+P ++ + L + E G + AE++YD+ + RSR FGFVTM +VE+A I
Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVI 142
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ ++IGGR +KVN E P G A Q FV+SP+K+Y GNL +T++
Sbjct: 143 EKLNDTEIGGRKIKVNITEKPLEGMDIAT---TQAEDSQFVESPYKVYIGNLAKTVTNEL 199
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L+D F + +L AKV T +S GFGFV+F + E++++A+ A+N +EG+ +R+N
Sbjct: 200 LKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNK 259
Query: 292 A 292
A
Sbjct: 260 A 260
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 122/228 (53%), Gaps = 35/228 (15%)
Query: 88 EQEEEE-----------------------EEEAVEEEEEPKVAASDEAARLYVGNLPYSM 124
+ EE+E + E + A +LY GNLPY+
Sbjct: 86 QLEEDEPAGEVEEQQTEEEEEQGAAAEAISDGGEEAGGDGSTGTGSSATKLYFGNLPYNC 145
Query: 125 TSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTV 184
S+ LA + + E++YDR T RSRGF FVTM ++E+ + I+ DG+ GRT+
Sbjct: 146 DSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTM 205
Query: 185 KVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLS 244
+VN + P+ +A + P+ + HK++ GNL W +T + L DAFQ ++
Sbjct: 206 RVNMADRPK--PKAPLYPETE----------HKLFVGNLSWTVTPEMLTDAFQRCGNVVG 253
Query: 245 AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
A+V+++ TGRSRG+GFV + T E++ A++ +NG E+EGR +R+N+A
Sbjct: 254 ARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 301
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T ED + +
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G GR +R+NMA +R P P ET+
Sbjct: 195 LDGTLYSGRTMRVNMA-DRPKPKAPLYPETE 224
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 122/228 (53%), Gaps = 35/228 (15%)
Query: 88 EQEEEE-----------------------EEEAVEEEEEPKVAASDEAARLYVGNLPYSM 124
+ EE+E + E + A +LY GNLPY+
Sbjct: 202 QLEEDEPAGEVEEQQTEEEEEQGAAAEAISDGGEEAGGDGSTGTGSSATKLYFGNLPYNC 261
Query: 125 TSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTV 184
S+ LA + + E++YDR T RSRGF FVTM ++E+ + I+ DG+ GRT+
Sbjct: 262 DSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTM 321
Query: 185 KVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLS 244
+VN + P+ +A + P+ + HK++ GNL W +T + L DAFQ ++
Sbjct: 322 RVNMADRPK--PKAPLYPETE----------HKLFVGNLSWTVTPEMLTDAFQRCGNVVG 369
Query: 245 AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
A+V+++ TGRSRG+GFV + T E++ A++ +NG E+EGR +R+N+A
Sbjct: 370 ARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 417
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL + S L Q +V+++R TGRSRGF FVT T ED + +
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++G GR +R+NMA +R P P ET+
Sbjct: 311 LDGTLYSGRTMRVNMA-DRPKPKAPLYPETE 340
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 6/168 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VGNLP+ + S +LA +F +AGTV AE++Y+R TDRSRGFGFVTM ++EE K+A
Sbjct: 115 EEDKIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKA 174
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ +F G ++ GR + VN P+G + ++ G ++Y GNL W +
Sbjct: 175 VEMFSGYELNGRVLTVN-KAAPKGAQPERPPRPPRSFSSGL-----RVYVGNLPWEVDDA 228
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
L F + A+V+++R TGRSRGFGFVT + D+ A+ A++
Sbjct: 229 RLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD 276
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
KI+ GNL + + S+ L F GQ G + A+VI+ R T RSRGFGFVT T E+L+ A++
Sbjct: 118 KIFVGNLPFDIDSENLASLF-GQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVE 176
Query: 276 AMNGVEVEGRPLRLNMA 292
+G E+ GR L +N A
Sbjct: 177 MFSGYELNGRVLTVNKA 193
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 116/181 (64%), Gaps = 8/181 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGN+P ++T+ L+ +FA GTV AE++YD+ + RSR FGFVTM + EE AI
Sbjct: 70 KLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIES 129
Query: 174 FDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +++GGR +KVN E +P A P+ + S FVDS +K+Y GNL +T++
Sbjct: 130 LNDTEVGGRKIKVNVTESFLPNID---ASAPESEPS---FVDSQYKVYVGNLAKKVTTEV 183
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L++ F + +LSA V T +S+G+GFVTF + E++++A+ N E+EG+ +R+N
Sbjct: 184 LKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQTIRVNR 243
Query: 292 A 292
A
Sbjct: 244 A 244
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ L F ++ A+V++++Y+GRSR FGFVT TAE++ +A++
Sbjct: 69 RKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIE 128
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
++N EV GR +++N+ P + +A E++
Sbjct: 129 SLNDTEVGGRKIKVNVTESFLPNIDASAPESE 160
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
E EP D ++YVGNL +T+ L F+E G V SA + T +S+G+GFVT
Sbjct: 158 ESEPSFV--DSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVT 215
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVN 187
S EE + A+ F+ +++ G+T++VN
Sbjct: 216 FSSEEEVEAAVSTFNNTELEGQTIRVN 242
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 19/213 (8%)
Query: 77 VTEDSQDEPETEQEEEEEEEAVEEEE--------EPKVAASD--EAARLYVGNLPYSMTS 126
V S DE E + E E EA E EE E + AA + E A++YVGNLPY + S
Sbjct: 62 VEAKSADEEEEKAGEPVEMEAGEFEEVLASGGEGEGQYAAVEPPEEAKVYVGNLPYDVDS 121
Query: 127 SSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
LA++F +AG V AE++Y+R T +SRGFGFVTM +VEEA +AI +F I GR + V
Sbjct: 122 EGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRYDISGRLLNV 181
Query: 187 NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAK 246
N R R G +++ + F + + Y GNL W + L F ++ AK
Sbjct: 182 N-----RASSR---GTRMERPQRQFAPA-FRAYVGNLPWQVDDSRLVQLFSEHGEVVDAK 232
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
V+++R TGRSRGFGFV+ + E+L A+ A++G
Sbjct: 233 VVYDRETGRSRGFGFVSMVSKEELNDAISALDG 265
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GNL + + S+GL F Q G++ A+VI+ R TG+SRGFGFVT T E+ A++
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFD-QAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIE 167
Query: 276 AMNGVEVEGRPLRLNMANER 295
+ ++ GR L +N A+ R
Sbjct: 168 MFSRYDISGRLLNVNRASSR 187
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 37/290 (12%)
Query: 33 PSLFKTKSPKP-----LKLEKAQNPSA------------LHLSLLSLSYFRQFSASFDGF 75
PSLF +K+ P LK K Q P + H S L L++ Q S D
Sbjct: 23 PSLFSSKTRYPILSNSLKTLKLQLPCSNSSPFSPSLLSTTHRSPL-LTFVAQTS---DWA 78
Query: 76 QVTED------SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAA---RLYVGNLPYSMTS 126
Q E+ ++ EP E+ +E E EE V AS E + +++VGNLP+ + S
Sbjct: 79 QQEEEGGAAWENEGEPTWANEDSDETEGGEE-----VVASAEPSEDLKIFVGNLPWDVES 133
Query: 127 SSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
+LA +F EAG+V AE++Y++ T++SRGFGFV M + E+ ++A+ F G ++ GR + V
Sbjct: 134 ENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKALNKFSGYELDGRVLTV 193
Query: 187 NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAK 246
N P+ R P+ S G DS +Y GNL W + + L + F+ + +A+
Sbjct: 194 N-KATPKEA-RPERPPRTFGSGSGSRDSGLSVYVGNLPWSVDAARLEEIFREHGNVENAR 251
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
++ +R TGRSRGFGFVT + D+ A+ A++G ++GR +R+++A R+
Sbjct: 252 IVMDRETGRSRGFGFVTMSSEADINGAIAALDGQSLDGRTIRVSVAEGRS 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGNLP+S+ ++ L E+F E G V +A IV DR T RSRGFGFVTM S + AI
Sbjct: 223 VYVGNLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAAL 282
Query: 175 DGSQIGGRTVKVNFPEVPRGG 195
DG + GRT++V+ E GG
Sbjct: 283 DGQSLDGRTIRVSVAEGRSGG 303
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A+S +LY+GN+P ++ + L + E G V AE++YD+ + RSR F FVTM +VE+
Sbjct: 68 ASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVED 127
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI + +++GGR +KVN E P LQ F+DSP+K+Y GN+
Sbjct: 128 ANAAIEKLNETEVGGRKIKVNITEKPVVN--TVDMSFLQAEESQFIDSPYKVYVGNISST 185
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
++++ L++ F + +LSAKV T +S G+GFVTF + E++ +A+ + N +EG+P
Sbjct: 186 VSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNALLEGQP 245
Query: 287 LRLNMA 292
+R+N A
Sbjct: 246 IRVNKA 251
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGE--RA 198
E+VYDR+T RSRGFGFVTM S EEA A+ F+G GR ++VN P PR G RA
Sbjct: 2 VEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRA 61
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
G FVDS +K+Y GNL WG+ + L + F Q +L AKVI++R +GRSRG
Sbjct: 62 PRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRG 121
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
FGFVT+ +AE++ +A+ ++G++++GR +R+ +A
Sbjct: 122 FGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVA 155
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D ++YVGNL + + +S+L +F+E G V A+++YDR + RSRGFGFVT GS EE
Sbjct: 76 DSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNN 135
Query: 170 AIRLFDGSQIGGRTVKVNFPE 190
AI DG + GR ++V E
Sbjct: 136 AISNLDGIDLDGRQIRVTVAE 156
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 113/181 (62%), Gaps = 12/181 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LY GNLPYS+ S+ LA + + G+ E++YDR T +SRGF FVTM +E+ I
Sbjct: 116 ATKLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVI 175
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
DG + GRT++VNF P+ E + ++ HK++ GNL W +T++
Sbjct: 176 ENLDGKEFLGRTLRVNFSSKPKPKEPL------------YPETEHKLFVGNLSWSVTNEI 223
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L AFQ ++ A+V+++ TGRSRG+GFV + T ++++AL A+N VE+EGR +R+++
Sbjct: 224 LTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALAALNDVELEGRAMRVSL 283
Query: 292 A 292
A
Sbjct: 284 A 284
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S K+Y GNL + + S L Q +V+++R TG+SRGF FVT ED +
Sbjct: 115 SATKLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAV 174
Query: 274 LDAMNGVEVEGRPLRLNMANERAP--PVLP 301
++ ++G E GR LR+N +++ P P+ P
Sbjct: 175 IENLDGKEFLGRTLRVNFSSKPKPKEPLYP 204
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+T+ L + F E GTV A ++YD T RSRG+GFV + E + A+
Sbjct: 209 KLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALAA 268
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERA 198
+ ++ GR ++V+ + G+RA
Sbjct: 269 LNDVELEGRAMRVSLAQ----GKRA 289
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
E+E EEE +EE+ + S+ +L+V NLP+SM+ + ++E+F + GTV + EI+
Sbjct: 70 EKETSAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQ 129
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
+ ++RGF FVTM S EEA+ AI FD SQ+ GR + VNF R ++ P
Sbjct: 130 K-DGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNF---ARRFKKPTPKPPNDLP 185
Query: 208 YQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFET 266
D+ HK+Y NL W S LR+ F +SA+V+F GRS G+GFV+F T
Sbjct: 186 SPPPGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFAT 245
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMA 292
E+ + A+ ++G E+ GRP+ L +
Sbjct: 246 REEAEDAIAKLDGKEIMGRPIILKFS 271
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K++ NL W ++ + + F GQ G ++ I + G++RGF FVT + E+ Q+A+D
Sbjct: 95 RKLFVFNLPWSMSVNDISELF-GQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAID 153
Query: 276 AMNGVEVEGRPLRLNMANERAPP 298
+ +V GR + +N A P
Sbjct: 154 KFDTSQVSGRIISVNFARRFKKP 176
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
gi|297321966|gb|EFH52387.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 4/198 (2%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV E EE A +S+ A R+Y+GN+P ++T+ L ++ E G V +++YD+ + RS
Sbjct: 57 AVTETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRS 116
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
R FGF TM SVE+A + +G+ + GR +KVN E P + LQ+ FVD
Sbjct: 117 RRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSSPDLS-LLQSEDSAFVD 175
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
SP+K+Y GNL +T + L + F + ++SAKV T +S GFGFVTF + ED+++A
Sbjct: 176 SPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAA 235
Query: 274 LDAMNGVEVEGRPLRLNM 291
+ A+N +P L++
Sbjct: 236 ILALNNSAKPSQPEMLSL 253
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 119/214 (55%), Gaps = 21/214 (9%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
E+E +EE +EE+ + S+ +L+V NLP+SM+ + ++E+F + GTV + EI+
Sbjct: 70 EKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQ 129
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF--------PEVPRGGERAA 199
+ ++RGF FVTM S EEA+ AI FD Q+ GR + V+F P+ P A
Sbjct: 130 K-DGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPA 188
Query: 200 MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRG 258
G D+ HK+Y NL W S LR+ F +SA+V+F GRS G
Sbjct: 189 PG-----------DTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSG 237
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+GFV+F T E+ ++A+ +NG E+ GRP+ L +
Sbjct: 238 YGFVSFATREEAENAITKLNGKEIMGRPITLKFS 271
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 135/234 (57%), Gaps = 30/234 (12%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E ++EE+ ++ E + A D +++VGNLP+S+ S+ LAE+F +AG V E++YD+
Sbjct: 66 EFDQEEDTFSDDAETRSFAPDH--KVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKT 123
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNS- 207
T SRGF FVTM S EA+ A + F+ ++ GR ++VN P+ R P+ +N+
Sbjct: 124 TGNSRGFAFVTMSSAAEAEVAAQQFNNYELEGRALRVNSGPPPKNENRGFNENPRFRNNS 183
Query: 208 -YQGFVDS-------------------------PHKIYAGNLGWGLTSQGLRDAFQGQPG 241
+G DS ++++ GNL WG+ + L F+ Q
Sbjct: 184 FNRGGSDSYRGGSDGYRGGGSDGYRGGGSSSYSENRVHVGNLAWGVDNAALESLFREQGR 243
Query: 242 LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ AKVI++R +GRSRGFGFVTF + +++ SA+ +++G ++ GR ++++ A+ +
Sbjct: 244 VVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSK 297
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NLP+S++ + +F + GTV EI+ + RSRGF FVT+ S EEA+ AI
Sbjct: 84 KLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQK-NGRSRGFAFVTLASGEEAQAAIDK 142
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
D ++ GR ++V F +R + ++ HKIY NL W + S LR
Sbjct: 143 LDSHEVSGRIIRVEF------AKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRSTHLR 196
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F +S++V+F+ TGRS G+GFV+F T E+ ++A+ A++G E+ GRPLRL ++
Sbjct: 197 EFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLKFSD 256
Query: 294 ER 295
+
Sbjct: 257 RK 258
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 120/183 (65%), Gaps = 8/183 (4%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LYVGN+P ++T+ L ++FA GTV AE++YD+ T+RSR FGFVTM + EEA A+
Sbjct: 68 ARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAV 127
Query: 172 RLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+G+++G R +KVN E +P +R+A P+ FVDS +K+Y GNL +T+
Sbjct: 128 EALNGTEVGDRKIKVNVTESFLP-NIDRSAPEPEAL-----FVDSQYKVYVGNLAKTVTT 181
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ L++ F + +LSA V T +S+G+GFVTF + E++++A+ N E+EG+ +R+
Sbjct: 182 EVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEGQLIRV 241
Query: 290 NMA 292
N A
Sbjct: 242 NRA 244
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ LRD F + A+V++++YT RSR FGFVT TAE+ +A++
Sbjct: 69 RKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
A+NG EV R +++N+ P + +A E
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPE 158
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGN+ +++ S LA+ F G E++YDR+ +SRGF FVT+ + + AK AI
Sbjct: 19 KLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRGFAFVTLSTEDAAKTAIEK 78
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DG ++ GR ++VN+P+VPRGG G + S +P K + N+ W + QGL+
Sbjct: 79 LDGHELEGRPLRVNYPQVPRGGGGFGGGFGTRPSIPA---NPAKCFVANIPWSVDDQGLQ 135
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F ++ +++ + +GRSRG GFVTF T ++ +A+ A++G E+ GR +R+ +A
Sbjct: 136 EFFSSHGTVVDCRILTDAESGRSRGIGFVTFATPDEANNAISALDGAELGGRSIRVALAT 195
Query: 294 ER 295
R
Sbjct: 196 GR 197
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A+ +V N+P+S+ L E F+ GTV I+ D + RSRG GFVT + +EA AI
Sbjct: 118 AKCFVANIPWSVDDQGLQEFFSSHGTVVDCRILTDAESGRSRGIGFVTFATPDEANNAIS 177
Query: 173 LFDGSQIGGRTVKV 186
DG+++GGR+++V
Sbjct: 178 ALDGAELGGRSIRV 191
>gi|255566169|ref|XP_002524072.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223536640|gb|EEF38282.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 190
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 111/173 (64%), Gaps = 12/173 (6%)
Query: 14 LCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALH-LSLLSLSYFRQFSASF 72
L KL NL + H LFK PL+L K N + LSLLS +F ++F
Sbjct: 19 LQTKLSNLSLTPSPLSLHTQYLFK-----PLRLLKLNNTHFPNPLSLLSTHHFIPKFSAF 73
Query: 73 DGFQVTED----SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSS 128
D F+V +D ++D+ ++E EE +E E+E P V ++DE RLYVGNLPYSMTSS
Sbjct: 74 DSFEVDQDDKISARDDLQSEPEELGQEIEEEKEFVP-VESNDEG-RLYVGNLPYSMTSSE 131
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGG 181
L EV EAG+VA+ EI+YDRVTDRSRGFGFVTM SVEEAKEAI++F+ S I
Sbjct: 132 LTEVMQEAGSVANVEIIYDRVTDRSRGFGFVTMASVEEAKEAIKMFNESMIAS 184
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y GNL + +TS L + Q + + ++I++R T RSRGFGFVT + E+ + A+
Sbjct: 117 RLYVGNLPYSMTSSELTEVMQEAGSVANVEIIYDRVTDRSRGFGFVTMASVEEAKEAIKM 176
Query: 277 MN 278
N
Sbjct: 177 FN 178
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 9/166 (5%)
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
+F +AGTV AE++Y+R TD+SRGFGFVTM SV+EA+ A+ F+ + GR + VN
Sbjct: 2 LFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAA 60
Query: 192 PRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
PRG R P++ + ++Y GNL W + + L F ++ A+V+++R
Sbjct: 61 PRGS-RPERAPRV-------YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDR 112
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
TGRSRGFGFVT ++L A+ A++G +EGR +R+N+A ER P
Sbjct: 113 ETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 158
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
E P+V + A R+YVGNLP+ + + L ++F+E G V A +VYDR T RSRGFGFVT
Sbjct: 67 ERAPRV--YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 124
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
M V+E EAI DG + GR ++VN E
Sbjct: 125 MSDVDELNEAISALDGQNLEGRAIRVNVAE 154
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 58/257 (22%)
Query: 99 EEEEEPKVAASDEAA-----------RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
E EE+ A D++A +L+VGNL +++ S+ LA++F AG V E++YD
Sbjct: 74 EVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYD 133
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPK--- 203
+VT RSRGFGFVTM + E + A + F+G + GR ++VN P P+ E + GP+
Sbjct: 134 KVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGG 193
Query: 204 --------------------------LQNSYQGF-----------------VDSPHKIYA 220
Q S G+ S +++Y
Sbjct: 194 YGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYV 253
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL WG+ L + F Q ++ A+VI++R +GRS+GFGFVT +++++Q A++++NG
Sbjct: 254 GNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGA 313
Query: 281 EVEGRPLRLNMANERAP 297
+++GR +R++ A R P
Sbjct: 314 DLDGRQIRVSEAEARPP 330
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNL + + +L +F E G V A ++YDR + RS+GFGFVT+ S +E ++AI
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 174 FDGSQIGGRTVKVNFPEV--PRG 194
+G+ + GR ++V+ E PRG
Sbjct: 310 LNGADLDGRQIRVSEAEARPPRG 332
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 58/257 (22%)
Query: 99 EEEEEPKVAASDEAA-----------RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
E EE+ A D++A +L+VGNL +++ S+ LA++F AG V E++YD
Sbjct: 66 EVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYD 125
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-PEVPRGGERAAMGPK--- 203
+VT RSRGFGFVTM + E + A + F+G + GR ++VN P P+ E + GP+
Sbjct: 126 KVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGG 185
Query: 204 --------------------------LQNSYQGF-----------------VDSPHKIYA 220
Q S G+ S +++Y
Sbjct: 186 YGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYV 245
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL WG+ L + F Q ++ A+VI++R +GRS+GFGFVT +++++Q A++++NG
Sbjct: 246 GNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGA 305
Query: 281 EVEGRPLRLNMANERAP 297
+++GR +R++ A R P
Sbjct: 306 DLDGRQIRVSEAEARPP 322
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNL + + +L +F E G V A ++YDR + RS+GFGFVT+ S +E ++AI
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 174 FDGSQIGGRTVKVNFPEV--PRG 194
+G+ + GR ++V+ E PRG
Sbjct: 302 LNGADLDGRQIRVSEAEARPPRG 324
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAE-IVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+R+YVGNL ++ S LA+V +AG +A E +V DR T RSRGFG+VT+ S++ A+ A+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD---SPHKIYAGNLGWGLT 228
+ DG + GR +K +F + P + +G V+ S K++ GNL WG+
Sbjct: 61 QKLDGHIVQGRALKASFSQ-----------PYKKAGKEGPVEVAASHTKVFIGNLPWGVD 109
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F+ ++ AK++++R TGRSRGFGFVT + ++ A+ +++G + +GR LR
Sbjct: 110 DGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLR 169
Query: 289 LNMAN 293
+ +A+
Sbjct: 170 VKLAD 174
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VAAS ++++GNLP+ + SL E F G V A+IVYDR T RSRGFGFVT+ S +
Sbjct: 92 VAASH--TKVFIGNLPWGVDDGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPK 149
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPE 190
EA EA++ DG+ GR ++V +
Sbjct: 150 EADEAVKSLDGADCDGRRLRVKLAD 174
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 31/263 (11%)
Query: 33 PSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQEEE 92
P F K+P +KL + S H+ S S+F+ F Q+ Q+ TEQ E
Sbjct: 13 PQRFSAKAPISIKL----HASTSHI-FSSKSFFKTGRLCF---QLCSTLQEVAPTEQTLE 64
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
+ +D +LYV NL +S+T++ + ++FA+ GTV EI+ + R
Sbjct: 65 ------------PIQPTDNVKKLYVVNLSWSLTAADITDLFAQCGTVTDVEIIKSK-DGR 111
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV 212
S+G+ FVTM S EEA+ A+ FD ++ GR ++V E+ + ++ P G
Sbjct: 112 SKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRV---ELAKRLKKPPSLPPPPGPRPG-- 166
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQ---GQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
++ H IYA NL W S LR F P SA+V+F+ +GRS G+GFV+F T ED
Sbjct: 167 ETRHVIYASNLAWKARSTHLRQVFTENFKTPS--SARVVFDSPSGRSAGYGFVSFLTRED 224
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
++A+ ++G E+ GRPLRL +
Sbjct: 225 AEAAISTVDGKELMGRPLRLKFS 247
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 15/211 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
A+ E + + ++ + +LYVGNL +S L + F++ G V +AE+V DR + RSRGF
Sbjct: 74 AMAETFQDQATSTAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGF 133
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA---------AMGPKLQNS 207
FVTM S + A++A R DG+++ GR ++VNFP+ P+ GERA + + +
Sbjct: 134 AFVTMASPDAAEKARRGLDGTELAGRAIRVNFPQ-PK-GERAPRAERGERSERSERSERT 191
Query: 208 Y----QGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Y G +++Y GNL W + L D F + A+V+ +R +GRSRGF FV
Sbjct: 192 YTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVA 251
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
T E+ A+ ++G E+ GR +R+N+A +
Sbjct: 252 LSTPEEANEAMANLDGEEIGGRTIRVNLATK 282
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y GNL W + L AF + +A+V+ +R +GRSRGF FVT + + + A
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRG 150
Query: 277 MNGVEVEGRPLRLNM---ANERAP 297
++G E+ GR +R+N ERAP
Sbjct: 151 LDGTELAGRAIRVNFPQPKGERAP 174
>gi|255548039|ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 281
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 102/181 (56%), Gaps = 1/181 (0%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NLP S + L E+F GTV S E+ + T SRG GFVTMGS+ AK AI
Sbjct: 100 LYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGFVTMGSINSAKNAIAAL 159
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DGS IGGR ++V F G R + F +SP K+Y GNL W + + LRD
Sbjct: 160 DGSDIGGREMRVKFSVDMNSGRRNPEPLSSAPTKNLFYESPFKVYVGNLAWTVKPEELRD 219
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F ++SA+V+++R G++R +GF++F + ++ +AL + NG + GR L + E
Sbjct: 220 QFSKFGTVVSARVLYDRKAGKNRAYGFLSFSSTKERDAAL-SFNGKDFRGRILVVRKGVE 278
Query: 295 R 295
R
Sbjct: 279 R 279
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
+E E EEEE + ++ +L+V NLP+S + + ++F + GTV+ EI+ +
Sbjct: 74 QEVTMEITPEEEE--IQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQK-N 130
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
RSRGF FVTM + EEA+ AI F+ ++ GR ++V F + R P+L +
Sbjct: 131 GRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAK----RLRRPPSPRLPGTPAD 186
Query: 211 FV--DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
++ HK+Y NL W + LR+ F +S++V+F+ GRS G+GFV+F T E
Sbjct: 187 IPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATRE 246
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERA 296
+ +A+ A +G E+ GRP+RL + ++A
Sbjct: 247 EAVAAISAFSGKELMGRPIRLKFSEDKA 274
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ NL W + ++D F GQ G +S I ++ GRSRGF FVT T E+ Q+A+D
Sbjct: 95 KLFVVNLPWSFSVVDIKDLF-GQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 277 MNGVEVEGRPLRLNMANE-RAPP 298
N +EV GR +R+ A R PP
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRRPP 176
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
+E E EEEE + ++ +L+V NLP+S + + ++F + GTV+ EI+ +
Sbjct: 74 QEVTVEITPEEEE--IQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQK-N 130
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
RSRGF FVTM + EEA+ AI F+ ++ GR ++V F + R P+L +
Sbjct: 131 GRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAK----RLRRPPSPRLPGTPAD 186
Query: 211 FV--DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
++ HK+Y NL W + LR+ F +S++V+F+ GRS G+GFV+F T E
Sbjct: 187 IPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATRE 246
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERA 296
+ +A+ A +G E+ GRP+RL + ++A
Sbjct: 247 EAVAAISAFSGKELMGRPIRLKFSEDKA 274
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ NL W + ++D F GQ G +S I ++ GRSRGF FVT T E+ Q+A+D
Sbjct: 95 KLFVVNLPWSFSVVDIKDLF-GQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 277 MNGVEVEGRPLRLNMANE-RAPP 298
N +EV GR +R+ A R PP
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRRPP 176
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 112/185 (60%), Gaps = 15/185 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAE-IVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+R+YVGNL ++ S LA+V +AG +A E +V DR T RSRGFG+VT+ S++ A+ A+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD---SPHKIYAGNLGWGLT 228
+ DG + GR +K ++ + P + +G V+ S K++ GNL WG+
Sbjct: 61 QKLDGHIVQGRALKASYSQ-----------PYKKAGKEGPVEVAASHTKVFIGNLPWGVD 109
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F+ ++ K++++R TGRSRGFGFVT + ++ A+ +++G + +GR LR
Sbjct: 110 DGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLR 169
Query: 289 LNMAN 293
+ +A+
Sbjct: 170 VKLAD 174
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VAAS ++++GNLP+ + SL E F G V +IVYDR T RSRGFGFVT+ S +
Sbjct: 92 VAASH--TKVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPK 149
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPE 190
EA EA++ DG+ GR ++V +
Sbjct: 150 EADEAVKSLDGADCDGRRLRVKLAD 174
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 10/185 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNL + + S L +VFAE A ++ D T RSRGFGFV + S E A++AI
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEYDASGIA-VISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 174 FDGSQIGGRTVKVNFPEVPRG-----GERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
DG+ + GR ++VN E GER P+ +N + K+Y GNL WG+
Sbjct: 103 LDGADVDGRPIRVNISEARSSRREYDGERGERAPRERN----YDFDARKVYFGNLSWGMD 158
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L+D + +++I +R TGRSRGFGFVT +AE + ++ +NG +V+GR LR
Sbjct: 159 HLDLQDLCGEYGEVADSRLITDRETGRSRGFGFVTMSSAEQAEKVVNGLNGQDVDGRVLR 218
Query: 289 LNMAN 293
+N+AN
Sbjct: 219 VNIAN 223
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++Y GNL + M L ++ E G VA + ++ DR T RSRGFGFVTM S E+A++
Sbjct: 144 DARKVYFGNLSWGMDHLDLQDLCGEYGEVADSRLITDRETGRSRGFGFVTMSSAEQAEKV 203
Query: 171 IRLFDGSQIGGRTVKVNFPEV 191
+ +G + GR ++VN V
Sbjct: 204 VNGLNGQDVDGRVLRVNIANV 224
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P K+Y GNL WG+ L D F + VI + TGRSRGFGFV + E + A+
Sbjct: 42 PVKLYVGNLSWGVDDSMLTDVF-AEYDASGIAVISDMNTGRSRGFGFVEVPSQEIAEKAI 100
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
++G +V+GRP+R+N++ R+
Sbjct: 101 AELDGADVDGRPIRVNISEARS 122
>gi|388522459|gb|AFK49291.1| unknown [Lotus japonicus]
Length = 162
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 18/170 (10%)
Query: 1 MAASTVSMAASSSLCNKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPS----ALH 56
MA++T + SSS+CN++YNL + +L S +P+ +KA N + +
Sbjct: 1 MASTT---SVSSSICNRIYNLSF-----KHSSLALTCNFSQRPIS-QKAFNLNLKFQSFI 51
Query: 57 LSLLSLSYFRQFSASFDGFQVTEDS----QDEPETEQEEEEEEEAVEEEEEPKVAASDEA 112
LS LSL AS D F+V +DS QD PE E E E ++ ++EEE KV+ S +
Sbjct: 52 LSPLSLHRLHPPPASTDEFEVAQDSTDSRQDNPEPEPETETSDKP-QQEEEQKVSTSSDD 110
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
RLYVGNLPYSMTSS L E+F EAGTV S E++YDRVTDRSRGF FVTMG
Sbjct: 111 RRLYVGNLPYSMTSSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMG 160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
++Y GNL + +TS L + F ++S +V+++R T RSRGF FVT
Sbjct: 112 RLYVGNLPYSMTSSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTM 159
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 20/205 (9%)
Query: 97 AVEEEEEPKVA---ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
AV E EE A +S+ A R+Y+GN+P ++T+ L ++ E G V +++YD+ + RS
Sbjct: 57 AVTETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE--KVMYDKYSGRS 114
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQ-------IGGRTVKVNFPEVPRGGERAAMGPKL-- 204
R FGF TM SVE+A + +G+ + GR +KVN E P A P L
Sbjct: 115 RRFGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITEKP-----IASSPDLSV 169
Query: 205 -QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Q+ FVDSP+K+Y GNL +T + L + F + ++SAKV T +S GFGFVT
Sbjct: 170 LQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVT 229
Query: 264 FETAEDLQSALDAMNGVEVEGRPLR 288
F + ED+++A+ A+N +EG+ +R
Sbjct: 230 FSSEEDVEAAIVALNNSLLEGQKIR 254
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E+ + +E +LYVGNL + +T+ SLA+VF + G + +V D T RSRGFGFVT+
Sbjct: 6 EDGAAVSGEEGVKLYVGNLSWGVTNDSLADVFNQYGA-SDVTVVTDMNTGRSRGFGFVTV 64
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
A I DG+ + GR ++VN P +G+ K+Y G
Sbjct: 65 PDQAVADACIAALDGADVDGRAIRVNVSVAREDRPPRPDRPPRDGQRRGYDFDGRKVYFG 124
Query: 222 NLGWGLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL WG+ L+D G+ G + A++I +R T RSRGFGFVT T + + ++ +NG
Sbjct: 125 NLSWGMDHLDLQD-LCGEFGTVEDARLITDRETNRSRGFGFVTMSTVAEAEEVVNQLNGQ 183
Query: 281 EVEGRPLRLNMAN 293
+V+GR LR+N+AN
Sbjct: 184 DVDGRVLRVNIAN 196
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ ++Y GNL + M L ++ E GTV A ++ DR T+RSRGFGFVTM +V EA+E
Sbjct: 117 DGRKVYFGNLSWGMDHLDLQDLCGEFGTVEDARLITDRETNRSRGFGFVTMSTVAEAEEV 176
Query: 171 IRLFDGSQIGGRTVKVNFPEVPR 193
+ +G + GR ++VN V +
Sbjct: 177 VNQLNGQDVDGRVLRVNIANVDK 199
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 8/203 (3%)
Query: 95 EEAVEEEEEPKVAA-SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
+E EE P++ +D +LYV NL +S+T++ + ++FA++GTV EI+ + RS
Sbjct: 61 QEVAATEETPELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSK-DGRS 119
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
+G+ FVTM S EEA+ A+ FD ++ GR ++V + + P + +
Sbjct: 120 KGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPG-----E 174
Query: 214 SPHKIYAGNLGWGLTSQGLRDAF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+ H IYA NL W S LR F + SA+V+F+ +GRS G+GFV+F T ED ++
Sbjct: 175 TRHVIYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEA 234
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A+ ++G E+ GRPLRL + ++
Sbjct: 235 AISTVDGKELMGRPLRLKFSEKK 257
>gi|225427185|ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+E E E E+ +EP ++ +L+V NLP+S++ + +F E GTV EI+ +
Sbjct: 71 QEIEVEAKPEQTQEP-----NQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQK- 124
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
RSRG+ FVTM S EEA+ + FD ++ GR ++V F + ++ + P +
Sbjct: 125 DGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFA---KRFKKPSPPPPPPPAGP 181
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
++ HK+Y NL W + S LR+ F +S +V+F+ +GRS G+GF +F T E+
Sbjct: 182 PAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEE 241
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
++A+ A++G E+ GRP+ L +
Sbjct: 242 AEAAISALDGKELMGRPVHLKFS 264
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ NL W L+ +++ F G+ G ++ I ++ GRSRG+ FVT ++ E+ Q+ ++
Sbjct: 90 KLFVLNLPWSLSVVDIKNLF-GECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEK 148
Query: 277 MNGVEVEGRPLRLNMAN 293
+ E+ GR +R+ A
Sbjct: 149 FDSYELSGRIIRVEFAK 165
>gi|297742089|emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+E E E E+ +EP ++ +L+V NLP+S++ + +F E GTV EI+ +
Sbjct: 41 QEIEVEAKPEQTQEP-----NQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQK- 94
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
RSRG+ FVTM S EEA+ + FD ++ GR ++V F + ++ + P +
Sbjct: 95 DGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFA---KRFKKPSPPPPPPPAGP 151
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
++ HK+Y NL W + S LR+ F +S +V+F+ +GRS G+GF +F T E+
Sbjct: 152 PAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEE 211
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
++A+ A++G E+ GRP+ L +
Sbjct: 212 AEAAISALDGKELMGRPVHLKFS 234
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ NL W L+ +++ F G+ G ++ I ++ GRSRG+ FVT ++ E+ Q+ ++
Sbjct: 60 KLFVLNLPWSLSVVDIKNLF-GECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEK 118
Query: 277 MNGVEVEGRPLRLNMAN 293
+ E+ GR +R+ A
Sbjct: 119 FDSYELSGRIIRVEFAK 135
>gi|255566167|ref|XP_002524071.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223536639|gb|EEF38281.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 107
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+GL+DAF QPG+LSAKVI+ER TGRSRGFGFV+FE+AED ++AL++MNGVEVEGRPLRL
Sbjct: 16 EGLKDAFADQPGVLSAKVIYERDTGRSRGFGFVSFESAEDAEAALNSMNGVEVEGRPLRL 75
Query: 290 NMANERAPPVLPAAKETKTENSIDGSELLSSIST 323
N+A +RA P A E+ E++++ SE+LSSI +
Sbjct: 76 NLAADRART--PPAVESNAEDNLEMSEMLSSIGS 107
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L + FA+ V SA+++Y+R T RSRGFGFV+ S E+A+ A+ +G ++ GR +++N
Sbjct: 18 LKDAFADQPGVLSAKVIYERDTGRSRGFGFVSFESAEDAEAALNSMNGVEVEGRPLRLNL 77
>gi|326512018|dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 10/194 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A +YV NLPY + + L F AG V ++++YDR RSRGFG+VTM +V+EA++A
Sbjct: 567 EGATVYVRNLPYHLDNEGLKLNFQHAGVVLFSKVIYDREIGRSRGFGYVTMNTVQEAEKA 626
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+R++ GS++ GR + V+ PRGG S G SP +I+ NL + +
Sbjct: 627 VRIYHGSEVHGRRLTVSI-AAPRGGTWVGA----TRSQSG---SPLRIFVCNLPSQVDNS 678
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGR--SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F ++ A+VI+ER G SRGFGFVT T E+ A+ A+N +E L
Sbjct: 679 RLEELFNKHGQVVDARVIYERREGASCSRGFGFVTMATDEESYKAIRALNKQVLEEHTLV 738
Query: 289 LNMANERAPPVLPA 302
+ +A ER V P+
Sbjct: 739 VRVARERPDRVCPS 752
>gi|226533248|ref|NP_001149356.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195626620|gb|ACG35140.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414884785|tpg|DAA60799.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 251
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 11/180 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E P+ A A +LYVGN+P ++T+ L ++FA GTV AE++YD+ T+RSR FGFVTM
Sbjct: 61 EAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTM 117
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
+ EEA A+ +G+++G R +KVN E +P +R+A P+ FVDS +K+Y
Sbjct: 118 STAEEANAAVEALNGTEVGDRKIKVNVTESFLP-NIDRSAPEPEAL-----FVDSQYKVY 171
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL +T++ L++ F + +LSA V T +S+G+GFVTF + E++++A+ N
Sbjct: 172 VGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNN 231
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ LRD F + A+V++++YT RSR FGFVT TAE+ +A++
Sbjct: 69 RKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
A+NG EV R +++N+ P + +A E
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPE 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EP+ D ++YVGNL ++T+ L F+E G + SA + + T +S+G+GFVT
Sbjct: 158 EPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFS 217
Query: 163 SVEEAKEAIRLFDGS 177
S EE + A+ F+ +
Sbjct: 218 SEEEVEAAVATFNNA 232
>gi|224035665|gb|ACN36908.1| unknown [Zea mays]
Length = 251
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 11/180 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
E P+ A A +LYVGN+P ++T+ L ++FA GTV AE++YD+ T+RSR FGFVTM
Sbjct: 61 EAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTM 117
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
+ EEA A+ +G+++G R +KVN E +P +R+A P+ FVDS +K+Y
Sbjct: 118 STAEEANAAVEALNGTEVGDRKIKVNVTESFLP-NIDRSAPEPEAL-----FVDSQYKVY 171
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL +T++ L++ F + +LSA V T +S+G+GFVTF + E++++A+ N
Sbjct: 172 VGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNN 231
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ LRD F + A+V++++YT RSR FGFVT TAE+ +A++
Sbjct: 69 RKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
A+NG EV R +++N+ P + +A E
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPE 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EP+ D ++YVGNL ++T+ L F+E G + SA + + T +S+G+GFVT
Sbjct: 158 EPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFS 217
Query: 163 SVEEAKEAIRLFDGS 177
S EE + A+ F+ +
Sbjct: 218 SEEEVEAAVATFNNA 232
>gi|224128049|ref|XP_002320231.1| predicted protein [Populus trichocarpa]
gi|222861004|gb|EEE98546.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 43 PLKLEKAQNPSALHLSLLSLSYFRQFSASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEE 102
P++L+ + +L LS R+F A +E +EE ++ E +++
Sbjct: 39 PIQLQHPKLCCSLSLSNTLCLRSRKFLAVLAVVDKETVITEEINHVREEIDDFELKKKQA 98
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
+P LYV NLP S + L E+F G+V S E+ + T SRG G++TMG
Sbjct: 99 KP--------CELYVCNLPRSSDIADLVEMFKPFGSVLSVEVSRNPETGVSRGCGYITMG 150
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS---YQGFVDSPHKIY 219
SVE A+ A+ DGS +GGR ++V + G R P+ NS F +SPHK+Y
Sbjct: 151 SVESARNAVSALDGSDVGGREMRVRYSVEISSGRR---NPEALNSAPTKHLFYESPHKLY 207
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL W LR+ F ++SA+V+ +R G++R + F++F + + +AL +MNG
Sbjct: 208 VGNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRTYAFLSFLSDAERDAAL-SMNG 266
Query: 280 VEVEGRPLRLNMANERAP 297
E R L + E+ P
Sbjct: 267 TEFYDRMLVVKRGVEKRP 284
>gi|15223293|ref|NP_171616.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]
gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 293
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E +++V + EP LYV N+P S + L ++F GTV S E+ + T
Sbjct: 89 EPNKDSVVSKAEP--VKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTG 146
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
SRG G+VTMGS+ AK AI DG+++GGR ++V + G R P++ NS
Sbjct: 147 ESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRR--NPEVLNSTPKK 204
Query: 212 V---DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
+ +S HK+Y GNL W GLR+ F ++S +V+ +R TGR+R F F++F + E
Sbjct: 205 ILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGE 264
Query: 269 DLQSALDAMNGVEVEGR 285
+ +AL + NG + EGR
Sbjct: 265 ERDAAL-SFNGTQYEGR 280
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++Y N+ L D FQ ++S +V TG SRG G+VT + + A+
Sbjct: 107 PCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAI 166
Query: 275 DAMNGVEVEGRPLR------LNMANERAPPVL 300
+++G EV GR +R +N R P VL
Sbjct: 167 ASLDGTEVGGREMRVRYSVDMNPGTRRNPEVL 198
>gi|297843010|ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E ++V E EP LYV N+P S + L ++F GTV S E+ +
Sbjct: 92 EGETNGDSVVSEAEP--VKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQ 149
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T SRG G+VTMGS+ AK AI DG+++GGR ++V + G R P++ NS
Sbjct: 150 TGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGARR--NPEVLNSTP 207
Query: 210 GFV---DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
+ +S +K+Y GNL W GLRD F ++S +V+ +R TG++R F F++F
Sbjct: 208 KKILMYESQYKVYVGNLPWFTQPDGLRDHFSKFGTIVSTRVLHDRKTGKNRVFAFLSFTN 267
Query: 267 AEDLQSALDAMNGVEVEGR 285
+E+ +AL ++NG + EGR
Sbjct: 268 SEERDAAL-SLNGTQYEGR 285
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++Y N+ L D FQ ++S +V TG SRG G+VT + + A+
Sbjct: 112 PCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAI 171
Query: 275 DAMNGVEVEGRPLR------LNMANERAPPVL 300
+++G EV GR +R +N R P VL
Sbjct: 172 ASLDGTEVGGREMRVRYSVDMNPGARRNPEVL 203
>gi|79316226|ref|NP_001030925.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189111|gb|AEE27232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 294
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 9/198 (4%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV-YDRVT 150
E +++V + EP LYV N+P S + L ++F GTV S E+V + T
Sbjct: 89 EPNKDSVVSKAEP--VKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQT 146
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
SRG G+VTMGS+ AK AI DG+++GGR ++V + G R P++ NS
Sbjct: 147 GESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRR--NPEVLNSTPK 204
Query: 211 FV---DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
+ +S HK+Y GNL W GLR+ F ++S +V+ +R TGR+R F F++F +
Sbjct: 205 KILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSG 264
Query: 268 EDLQSALDAMNGVEVEGR 285
E+ +AL + NG + EGR
Sbjct: 265 EERDAAL-SFNGTQYEGR 281
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER-YTGRSRGFGFVTFETAEDLQSA 273
P ++Y N+ L D FQ ++S +V+ TG SRG G+VT + + A
Sbjct: 107 PCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINSAKIA 166
Query: 274 LDAMNGVEVEGRPLR------LNMANERAPPVL 300
+ +++G EV GR +R +N R P VL
Sbjct: 167 IASLDGTEVGGREMRVRYSVDMNPGTRRNPEVL 199
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 27/183 (14%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LYVGN+P ++T+ LA +FA+ GTV AE+++D+ T RSR FGFVTM + EEA AI
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAI 128
Query: 172 RLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +++GGR +KVN E +P +R+A P+ FVDS ++ G
Sbjct: 129 ESLNETEVGGRKIKVNVTESFLP-NIDRSAPEPE-----PVFVDSQYRFTLGE------- 175
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+LSA V T +S+G+GFVTF + E++++A+ N E+EG+P+R+
Sbjct: 176 ------------VLSATVSRIPGTAKSKGYGFVTFSSEEEVEAAVSTFNNAELEGQPIRV 223
Query: 290 NMA 292
N A
Sbjct: 224 NKA 226
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GN+ +T+ L F + A+V+F++YTGRSR FGFVT T E+ +A++
Sbjct: 70 RKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIE 129
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
++N EV GR +++N+ P + +A E
Sbjct: 130 SLNETEVGGRKIKVNVTESFLPNIDRSAPE 159
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 107/183 (58%), Gaps = 8/183 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NLP+SM+++ + ++F + GTV EI+ + R +G+ FVTM S EEA+ A+
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGK-DGRGKGYAFVTMASGEEAQAAVDK 145
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FD ++ GR ++V +R ++ H IYA NL W + S LR
Sbjct: 146 FDTLELSGRILRVEL------AKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLR 199
Query: 234 DAF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F + LSA+++F+ +G++ G+GF+++ T E+ ++A+ A++G E+ GR L L ++
Sbjct: 200 EFFTENFKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKIS 259
Query: 293 NER 295
++
Sbjct: 260 EKK 262
>gi|449445537|ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 35 LFKTKSPKPLKLEKAQN-PSALHLSLLSLSYFRQ-----FSASFDGFQVTEDSQDEPETE 88
+ K KSP ++ + S+ H L R F F E + E
Sbjct: 22 ILKHKSPSYCTFKQLHSFHSSFHFDYTKLVSLRHNHGERFPVLFTVLD-NESALTEEAIV 80
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
+ + + E ++ +E K+A E LYV NLP S + L E+F GTV +AE+ +
Sbjct: 81 EGDVKSEGSLSNQEVKKLARPCE---LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNP 137
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP----EVPRGGERAAMGPKL 204
T S+G G+VTMGS+ AK +I DGS +GGR ++V F R PK
Sbjct: 138 ETGISKGCGYVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKK 197
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
Y+ SP+K+Y GNL W + LR+ F ++SAKV+ +R G+SR +GF++F
Sbjct: 198 NIIYE----SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSF 253
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
+A + +++ +++G E R L + ER+
Sbjct: 254 SSAAERDASI-SLDGTEYNNRKLVVREGLERS 284
>gi|356520229|ref|XP_003528766.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 5/201 (2%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V E+EE + +A +YV NLP ++ L ++F GT+ S E+ D T+ S+G G
Sbjct: 78 VLEDEEERDKRLGKACEVYVCNLPRRCDATYLLDMFRPYGTILSVEVCRDAETNESKGCG 137
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ--GFVDSP 215
+VT+GS+ A+ A+ DGS +GGR ++V F + +R + K+ +S + + +SP
Sbjct: 138 YVTLGSIYSARNAVAALDGSDVGGRELRVRF-SIEMNSKRRSFN-KMNSSTKRISYYESP 195
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
HK+Y GNL + + LRD F ++SA+V+ + G SR + F++F++ + +A+
Sbjct: 196 HKLYVGNLAKTVRPEQLRDLFSRFGNVVSARVLHDFKQGNSRVYAFLSFQSEAERDAAM- 254
Query: 276 AMNGVEVEGRPLRLNMANERA 296
++NG E GR L + ER+
Sbjct: 255 SLNGTEYYGRTLIVKEGVERS 275
>gi|449518978|ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 35 LFKTKSPKPLKLEKAQN-PSALHLSLLSLSYFRQ-----FSASFDGFQVTEDSQDEPETE 88
+ K KSP ++ + S+ H L R F F E + E
Sbjct: 20 ILKHKSPSYCTFKQLHSFHSSFHFDYTKLVSLRHNHGERFPVLFTVLD-NESALTEEAIV 78
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
+ + + E ++ +E K+A E LYV NLP S + L E+F GTV +AE+ +
Sbjct: 79 EGDVKSEGSLSNQEVKKLARPCE---LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNP 135
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP----EVPRGGERAAMGPKL 204
T S+G G+VTMGS+ AK +I DGS +GGR ++V F R PK
Sbjct: 136 ETGISKGCGYVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKK 195
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
Y+ SP+K+Y GNL W + LR+ F ++SAKV+ +R G+SR +GF++F
Sbjct: 196 NIIYE----SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSF 251
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
+A + +++ +++G E R L + ER+
Sbjct: 252 SSAAERDASI-SLDGTEYNNRKLVVREGLERS 282
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 9/222 (4%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAAS----DEAARLYVGNLPYSMTSSSLAEVFAEAGTV 139
+P T+ E ++ + E EE K A + D A L++GNL +++ L F E G +
Sbjct: 207 KPATQSESKKRKADSEPEETSKKAKTESNPDAVANLFIGNLSWNVDEEWLTREFEEFGEL 266
Query: 140 ASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA 199
A I+ DR + RS+GFG+V + E+A +A+ + S + R ++V+F PR A
Sbjct: 267 AGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAKNESLLDNRNIRVDF-STPRDKSNAG 325
Query: 200 MGPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
+ + Q F D+P + I+ GNL + T +R+ F + S ++ +R TG
Sbjct: 326 PQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGA 385
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+GFG+V + E+ Q+A +A+ G +V GRP+RL+ A R P
Sbjct: 386 PKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRLDYAQPRPP 427
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A ++ GNL + T + E FAE G V S + DR T +GFG+V MGSVEEA+ A
Sbjct: 346 ATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFN 405
Query: 173 LFDGSQIGGRTVKVNF--PEVPR 193
G +GGR V++++ P PR
Sbjct: 406 ALQGQDVGGRPVRLDYAQPRPPR 428
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 19/188 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL +++ LA FA+ GTV SA I+ D+ T R++GFG+VT S + A+ L
Sbjct: 185 VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAMAL- 243
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHK-----IYAGNLGWGL 227
G+++ GR ++V+ P+ PR G R QG ++P ++ GNL + +
Sbjct: 244 TGTELDGREIRVDVSTPKPPRDGNR-----------QGRKEAPQSAPTTTLFLGNLSFNV 292
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T +R++F L+S + +R TG +GFG+V + E Q A++ +NGVE+ GR L
Sbjct: 293 TEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSL 352
Query: 288 RLNMANER 295
RL+ A R
Sbjct: 353 RLDYAGGR 360
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
EEE++P +YV NLP S ++ L ++F GT+ S E+ + T SRG G+
Sbjct: 88 EEEQQPPQRRPRGPCEIYVCNLPRSCNAAHLLDLFKPYGTIISVEVSRNAETGESRGCGY 147
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP---EVPRGGERAAMGPKLQNSYQGF-VDS 214
V M S+ AK AI DGS +GGR ++V F + R A G + + F ++
Sbjct: 148 VIMESINSAKSAIAALDGSDVGGRELRVKFSVEMSLERTDANANAGEMYASPKRTFYYEA 207
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
PHK+Y GNL + + LR+ F +LS +V+ +R G++R + F++FE+ + +A+
Sbjct: 208 PHKLYVGNLARVVKPEQLRNHFIRFGNVLSVRVLHDRKQGKARVYAFLSFESEAERDAAM 267
Query: 275 DAMNGVEVEGRPLRLNMANERAPP 298
++NG E GR + + +R P
Sbjct: 268 -SLNGTEFYGRTIVVREGAQRTEP 290
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 13/209 (6%)
Query: 94 EEEAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
EEE++ ++ + DE A ++VG L +++ + L F G V SA +V+DR +
Sbjct: 175 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQ 234
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
+SRGFG+V +E + +AI DGS+I GR ++VN+ + E A ++ N Q
Sbjct: 235 KSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQ-- 291
Query: 212 VDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
SP ++ G+L + +T + +AF + S ++ +R TG +GFG+V F + +D
Sbjct: 292 --SPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDD 349
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPP 298
+AL AMNG E+ GR +R++ APP
Sbjct: 350 ASAALKAMNGAEIAGRAIRVDF----APP 374
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 13/209 (6%)
Query: 94 EEEAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
EEE++ ++ + DE A ++VG L +++ + L F G V SA +V+DR +
Sbjct: 172 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQ 231
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
+SRGFG+V +E + +AI DGS+I GR ++VN+ + E A ++ N Q
Sbjct: 232 KSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQ-- 288
Query: 212 VDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
SP ++ G+L + +T + +AF + S ++ +R TG +GFG+V F + +D
Sbjct: 289 --SPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDD 346
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPP 298
+AL AMNG E+ GR +R++ APP
Sbjct: 347 ASAALKAMNGAEIAGRAIRVDF----APP 371
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV LP+SM+++ + ++F + GTV EI+ + R +G+ FVTM S EEA+ A+
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGTVTDVEIIRGK-DGRGKGYAFVTMASGEEAQAAVDK 145
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
FD ++ GR ++V +R ++ H IYA NL W + S LR
Sbjct: 146 FDTLELSGRILRVEL------AKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLR 199
Query: 234 DAF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F + LSA+++F+ +G + G+GF+++ T E+ ++A+ A++G E+ GR L L ++
Sbjct: 200 EFFTENFKAPLSARIVFDTPSGWATGYGFISYLTKEEAEAAISALDGKELMGRSLFLKIS 259
Query: 293 NER 295
++
Sbjct: 260 EKK 262
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R+YVGNL + +T SLAE+F+E V A ++ DR T RSRGF FV+M + E+ + A
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVERASAA 973
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGL 232
+G ++ GR ++V+ + ER ++ + F + ++Y GNL WG+ L
Sbjct: 974 LNGREVDGRELRVSKAQA--QAERGERPMRMPRQRRDFDQAEGRRVYFGNLSWGMDQYDL 1031
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+D + +++I +R TGRSRGFGFVT + + +NG +V+GR LR+N+A
Sbjct: 1032 QDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTTEADEVVAQLNGQDVDGRVLRVNIA 1091
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
H++Y GNL WG+T + L + F + + A V+ +R TGRSRGF FV+ ED++ A
Sbjct: 914 HRVYVGNLSWGVTDESLAELFS-EFDVRDASVMKDRETGRSRGFAFVSMNNEEDVERASA 972
Query: 276 AMNGVEVEGRPLRLNMANERA 296
A+NG EV+GR LR++ A +A
Sbjct: 973 ALNGREVDGRELRVSKAQAQA 993
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E R+Y GNL + M L ++ +E G+V + ++ DR T RSRGFGFVTM + EA E
Sbjct: 1013 EGRRVYFGNLSWGMDQYDLQDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTTEADEV 1072
Query: 171 IRLFDGSQIGGRTVKVNF 188
+ +G + GR ++VN
Sbjct: 1073 VAQLNGQDVDGRVLRVNI 1090
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L E+F GTV S E+ D T SRG GFVTM S+ EA+ AI
Sbjct: 130 LFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLAEARTAINAL 189
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMG----PKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
DG + GR + V R G P +++ +S +KIY GNL W + Q
Sbjct: 190 DGFDLDGREMFVKLAAHVIASRRNPGGLSHTPPMKDH---IFESRYKIYVGNLAWSVQPQ 246
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR+ F ++S +++ +R GRSR +GF++F +AE+L++AL +N E GR + +
Sbjct: 247 HLREHFTKCGTVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAALQ-LNNTEFHGRDIIVR 305
Query: 291 MANERAPPVL 300
A+ ++P L
Sbjct: 306 EAHVKSPDTL 315
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + L F G V SA +V+DR + +SRGFG+V +E + +AI
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEK- 254
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQGL 232
DGS+I GR ++VN+ + E A K+ N Q SP ++ G+L + +T +
Sbjct: 255 DGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQ----SPPAETLWIGSLSFSVTEDQV 310
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+AF + S ++ +R TG +GFG+V F + ED +AL AMNG E+ GR +R++ A
Sbjct: 311 YEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFA 370
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L+ F+ ++SA+V+F+R + +SRGFG+V F DL+++ A+
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFA---DLEASAKAI 252
Query: 278 --NGVEVEGRPLRLNMANERAP 297
+G E++GR +R+N A +R P
Sbjct: 253 EKDGSEIDGRAIRVNYATQRKP 274
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 116/212 (54%), Gaps = 5/212 (2%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
++ + EEE ++ K ++D + L+VGNL +++ L F E G ++ I+ +R
Sbjct: 207 KKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFEEFGELSGVRIMTER 266
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+ RSRGFG+V AK A ++I GRT+ +++ + PR A K QN
Sbjct: 267 ESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAK-PRDANNQAPREKAQNRA 325
Query: 209 QGFVD--SP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
+ F D SP + ++ GNL +G+ +R+ F+GQ + ++ + TGR +G+G+V F
Sbjct: 326 RSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEF 385
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
+ ++ + AL+ + G ++ GR +RL+ + RA
Sbjct: 386 SSVDEARQALNDLQGTDIGGRAIRLDFSTPRA 417
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 118/206 (57%), Gaps = 9/206 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
+EE+ EA + + +P A+ E ++VG L +S+ + LA+ F+E G V+SA + DR T
Sbjct: 289 DEEQPEAKKVKLDP---ATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNT 345
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
RSRGFG+V + + ++A+++ +G +I GR +KV+ P + K+ N
Sbjct: 346 GRSRGFGYVHFSTADAVEKALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDE-- 402
Query: 211 FVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+ P ++ GNL + +T GL F G + + ++ +R TG+ +GFG+V E ED
Sbjct: 403 -ISPPSSTLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVED 460
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
+ A +A++G E+EGR +R++ + R
Sbjct: 461 AKKAFEAISGQEIEGRRVRVDYSQPR 486
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K SD+ + L+VGNL +++ + LAE F GTV SA ++ DR + RS+GFG+V +
Sbjct: 231 KTEESDKPSTLFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATP 290
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
EEA++A G+ I GR +KV+F A G + + ++ GNL
Sbjct: 291 EEAEKAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYGDTVSPESDTLFVGNLP 350
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + F + S ++ E+ +GR +GFG+VTF + ED +SA + +NG + G
Sbjct: 351 FDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQSING 410
Query: 285 RPLRLNMANERAP 297
R RL+ + R P
Sbjct: 411 RNCRLDYSTPRPP 423
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 118/206 (57%), Gaps = 9/206 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
+EE+ EA + + +P A+ E ++VG L +S+ + LA+ F+E G V+SA + DR T
Sbjct: 289 DEEQPEAKKVKLDP---ATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNT 345
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
RSRGFG+V + + ++A+++ +G +I GR +KV+ P + K+ N
Sbjct: 346 GRSRGFGYVHFSTADAVEKALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDE-- 402
Query: 211 FVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+ P ++ GNL + +T GL F G + + ++ +R TG+ +GFG+V E ED
Sbjct: 403 -ISPPSSTLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVED 460
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
+ A +A++G E+EGR +R++ + R
Sbjct: 461 AKKAFEAISGQEIEGRRVRVDYSQPR 486
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSXAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S +LY GNLPYS S+ LA + G+ E++YDR T RSRGF FVTM SVE+
Sbjct: 60 AESPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVED 119
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
I DGS+ GGRT++VNF + P+ PKL + ++ +K++ GNL W
Sbjct: 120 CNAVIENLDGSEYGGRTLRVNFSDKPK--------PKLPL----YPETEYKLFVGNLSWS 167
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTG 254
+TS+ L FQ ++ A+V+++ TG
Sbjct: 168 VTSESLNQVFQEYGNVIGARVLYDGETG 195
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+Y GNL + S L Q G P L+ +V+++R TGRSRGF FVT + ED + +
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELV--EVLYDRDTGRSRGFAFVTMSSVEDCNAVI 124
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKETK 307
+ ++G E GR LR+N + ++ P LP ET+
Sbjct: 125 ENLDGSEYGGRTLRVNFS-DKPKPKLPLYPETE 156
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 33 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 92
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 93 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 149
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 150 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 196
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 29/225 (12%)
Query: 84 EPETEQE-----EEEEEEAVEEEEEPKVAASDEAA--------RLYVGNLPYSMTSSSLA 130
+P +EQ E+ E + E +P V ++ LYVGNL ++T L
Sbjct: 34 DPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILK 93
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ +++ + FV +A A++ +G QI VK+N+
Sbjct: 94 QYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW-- 150
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q S Q D ++ G+L + + LR+AF+ P LS V+++
Sbjct: 151 ------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWD 197
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A +R
Sbjct: 198 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 242
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY+GNL + M +L ++F++ + IV DR T RSRGFGF T+ S E A AI
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQY-QASDCVIVTDRNTGRSRGFGFATVPSQEMADSAIAA 133
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ S GR ++V P ER A + + ++ K+Y GNL WG+ L+
Sbjct: 134 LNDSDQFGRQMRVVISLPPE--ERPAREQRPKRNWDA---DGRKVYFGNLSWGMDHLDLQ 188
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D + +++I +R TGRSRGFGFVT + ++ + + +NG +V+GR LR+N+A
Sbjct: 189 DLCAEFGNVDESRLITDRETGRSRGFGFVTMSSEKEAEDVVAQLNGQDVDGRVLRVNIA 247
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 95 EEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
EE E+ PK + ++Y GNL + M L ++ AE G V + ++ DR T RSR
Sbjct: 153 EERPAREQRPKRNWDADGRKVYFGNLSWGMDHLDLQDLCAEFGNVDESRLITDRETGRSR 212
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
GFGFVTM S +EA++ + +G + GR ++VN
Sbjct: 213 GFGFVTMSSEKEAEDVVAQLNGQDVDGRVLRVNI 246
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S++ A L+VGNL +++ +L E F + SA +V D+ + RSRGFG+V S + A+
Sbjct: 301 SEKTATLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAE 360
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWG 226
+A +G+ + GR ++++F P G + G V SP ++ GNL +
Sbjct: 361 KAYNEKNGAHLQGREMRLDFASKPAEGNDPTTRAAERARKHGDVISPESDTLFVGNLSFN 420
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T + + + F + S ++ ++ +GR +GF +VTF + ED ++A + +NG ++GRP
Sbjct: 421 ATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQLNGSNLDGRP 480
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 481 VRLDFAKPR 489
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 52/79 (65%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNLGW + + L + F+ G++SA+V+ ++ + RSRGFG+V F + + + A +
Sbjct: 307 LWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNEK 366
Query: 278 NGVEVEGRPLRLNMANERA 296
NG ++GR +RL+ A++ A
Sbjct: 367 NGAHLQGREMRLDFASKPA 385
>gi|213404018|ref|XP_002172781.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212000828|gb|EEB06488.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 485
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 106 VAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ DE++R L+VGNLPYS+ L ++F +AG V A++ + RSRG G V M +V
Sbjct: 134 MGGEDESSRQLFVGNLPYSVRWQDLKDLFRKAGNVVRADVQMNH-EGRSRGNGIVLMETV 192
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM------------------------ 200
+EA+ AIR+FD + GR ++V RGG R+ M
Sbjct: 193 QEAQMAIRMFDSTDFMGRMIEVRLDRFARGGGRSGMAFSGPPAGAYGAGPAAAAPYMGQY 252
Query: 201 -GPKLQNS-YQGFVDSPHK-------IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
GP N+ FVD + I+ GNL W Q L D F + A + +E
Sbjct: 253 GGPAGYNAGPNDFVDRAYANGPPSPIIHIGNLPWLTVDQDLLDLFNSFGKIERAAIAYEP 312
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
+GRSRGFG V F+T + SA++ +NG RPL+++ A P P +
Sbjct: 313 -SGRSRGFGVVQFQTTPEAASAIEKLNGYVYGNRPLQISYARYNTPYFAPPTSD 365
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 33/178 (18%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R+YVGNLPY + + L + +AG V AEI+ + + +E
Sbjct: 72 RVYVGNLPYQIRWNELKDFMRQAGHVLYAEIL-------------ELPNGLSKDREQEPK 118
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
F G+ I EV R MG + ++S Q FV GNL + + Q L+
Sbjct: 119 FSGTGINS--------EVRRS---EGMGGEDESSRQLFV--------GNLPYSVRWQDLK 159
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
D F+ ++ A V + GRSRG G V ET ++ Q A+ + + GR + + +
Sbjct: 160 DLFRKAGNVVRADVQMN-HEGRSRGNGIVLMETVQEAQMAIRMFDSTDFMGRMIEVRL 216
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 16/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL ++T L + F G +A+ +I+ D+ +++ + FV +A A++
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTL 135
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G QI VK+N+ Q S Q D ++ G+L + + LR+
Sbjct: 136 NGKQIENNIVKINW--------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRN 180
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF+ P LS V+++ TG SRG+GFV+F + +D Q+A+D M G ++ GRPLR+N A +
Sbjct: 181 AFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Query: 295 R 295
R
Sbjct: 241 R 241
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 16/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL ++T L + F G +A+ +I+ D+ +++ + FV +A A++
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTL 135
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G QI VK+N+ Q S Q D ++ G+L + + LR+
Sbjct: 136 NGKQIENNIVKINW--------------AFQ-SQQSSSDDTFNLFVGDLNVNVDDETLRN 180
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF+ P LS V+++ TG SRG+GFV+F + +D Q+A+D M G ++ GRPLR+N A +
Sbjct: 181 AFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Query: 295 R 295
R
Sbjct: 241 R 241
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 11/185 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + LA+ FAE G V SA + DR T +SRGFG+V + E A EA L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTE-AVEAALLL 357
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQ 230
+G +I GR V ++ E+ G + + F DS + ++ GNL W T
Sbjct: 358 NGKEIDGRPVNID------KSEQKDKGAAREKRAEKFGDSASEPSAVLFVGNLSWDCTED 411
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+ + F + S ++ +R TGR +GFG+V F E + A + ++G EV GRP+RL+
Sbjct: 412 QVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPIRLD 471
Query: 291 MANER 295
+ R
Sbjct: 472 YSQPR 476
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
++ E++++ A E+ K +AS+ +A L+VGNL + T + EVF E G V S +
Sbjct: 370 DKSEQKDKGAAREKRAEKFGDSASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLP 429
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
DR T R +GFG+V +E AK+A G+++ GR +++++ + PR
Sbjct: 430 TDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPIRLDYSQ-PR 476
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E ++VG L +++ + LA+ FAE G V SA + DR T RSRGFG+V + E ++
Sbjct: 330 NEIKSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEK 389
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-KIYAGNLGWGLT 228
AI L +G +I GR V V+ P + A K ++ P ++ GNL +G+
Sbjct: 390 AIEL-NGKEIDGRAVNVDKSNPP---NKDASREKRAKTFGDTTSPPSATLFVGNLSFGMN 445
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L +AF + + ++ +R +GR +GFG+V F E + A AM GVE++GR +R
Sbjct: 446 DDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVR 505
Query: 289 LNMANER 295
L+ + R
Sbjct: 506 LDFSQPR 512
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 72 FDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAE 131
DG V D + P + E+ + + P +A L+VGNL + M +L E
Sbjct: 398 IDGRAVNVDKSNPPNKDASREKRAKTFGDTTSP------PSATLFVGNLSFGMNDDALWE 451
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
F+E G V + + DR + R +GFG+V VE AK+A G ++ GR+V+++F +
Sbjct: 452 AFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRLDFSQ- 510
Query: 192 PR 193
PR
Sbjct: 511 PR 512
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 28/92 (30%)
Query: 242 LLSAK------------------------VIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+ + V +R TGRSRGFG+V F T+E ++ A++ +
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE-L 393
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKETKTE 309
NG E++GR + ++ +N PP A++E + +
Sbjct: 394 NGKEIDGRAVNVDKSN---PPNKDASREKRAK 422
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 83 DEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
DEP T++ + E A P + ++ ++VG L +++ + LA FA G + SA
Sbjct: 302 DEPSTKKVKLENGSAA-----PAGGDAQQSKAVFVGQLSWNVDNDWLASEFASCGEIESA 356
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
+ DR T +SRGFG+V +VE A++A+ L +G +I R +KV+ PR + A
Sbjct: 357 TVQMDRNTGKSRGFGYVHFTTVEAAQKALEL-NGKEIDNRPIKVDI-STPRNPDAA---- 410
Query: 203 KLQNSYQGFVD--SP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
Q Q F D SP + ++ GNL + + + F G+ S ++ +R +GR +G
Sbjct: 411 -RQKRAQTFGDVTSPPSNTLFVGNLSFNTSEDSVWSLFNDY-GVKSVRLPTDRESGRPKG 468
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
FG+V FE E + A +A NG +++GRP+RL+ + R
Sbjct: 469 FGYVEFEDVEGAKKAFEANNGADLDGRPIRLDYSQPR 505
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 47/164 (28%)
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A++G +A+ E + + ++L +GS P
Sbjct: 291 AKSGKRKAAD-------------------DDEPSTKKVKLENGSA------------APA 319
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
GG+ Q S FV G L W + + L F + SA V +R T
Sbjct: 320 GGD-------AQQSKAVFV--------GQLSWNVDNDWLASEFASCGEIESATVQMDRNT 364
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
G+SRGFG+V F T E Q AL+ +NG E++ RP++++++ R P
Sbjct: 365 GKSRGFGYVHFTTVEAAQKALE-LNGKEIDNRPIKVDISTPRNP 407
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+GNL S+ +L + F AG + +++ D+ + + F+ + +A A++
Sbjct: 33 LYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDKKNNHV-NYAFIEYSTNHDANVALQTL 91
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G QI + +K+N+ Q+ D+ ++ G+L + L +
Sbjct: 92 NGIQIENKNIKINWA--------------FQSQTNLNDDTSFNLFIGDLNVNVDDTTLAN 137
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF+ PG L A V+++ T RSRG+GFV+F+T E+ Q+A+D M G E+ GR +R+N A +
Sbjct: 138 AFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEINGRAIRINWATK 197
Query: 295 R 295
R
Sbjct: 198 R 198
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 119/225 (52%), Gaps = 20/225 (8%)
Query: 91 EEEEEEAVEE-----EEEP-------KVAASDEAA---RLYVGNLPYSMTSSSLAEVFAE 135
EEE+ +AVE E EP K A DE+A L+VGN+ +++ L F E
Sbjct: 205 EEEKPKAVESKKRKAEAEPAHATKKNKTDAVDESAPTGNLFVGNISWNVDEEWLTREFEE 264
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
G +A I+ DR + RS+GFG+V + AK+A+ +G+++ GR ++++F PR
Sbjct: 265 FGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDF-STPRTN 323
Query: 196 ERAAMGPKLQNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
+ G K + F D+ + ++ GN+ + + + FQ + + ++ +R
Sbjct: 324 DGPGAGNKSNDRAARFGDTTNAPAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDR 383
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
TG +GFG+V + E+ Q+A A+ G ++ GRP+RL+ A ER+
Sbjct: 384 ETGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYAAERS 428
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 16/178 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL ++T L + F G +A+ +I+ D+ +++ + FV +A A++
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTL 61
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G QI VK+N+ S Q D ++ G+L + + LR+
Sbjct: 62 NGKQIENNIVKINWAF---------------QSQQSSSDDTFNLFVGDLNVNVDDETLRN 106
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF+ P LS V+++ TG SRG+GFV+F + +D Q+A+D+M G ++ GRPLR+N A
Sbjct: 107 AFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 164
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++SD+ L+VG+L ++ +L F + + S +++D T SRG+GFV+ S ++
Sbjct: 82 SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDD 141
Query: 167 AKEAIRLFDGSQIGGRTVKVNF 188
A+ A+ G + GR +++N+
Sbjct: 142 AQNAMDSMQGQDLNGRPLRINW 163
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L E+F GTV S EI D T SRG GFVTM S+ EA+ A+
Sbjct: 136 LFVCNLPRRCDVDDLYELFKPYGTVLSVEISRDPETGLSRGCGFVTMRSLPEARTAMNAL 195
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG + GR + V R +SPHKIY GN+ W + Q LR+
Sbjct: 196 DGFDLDGREMLVKLSSDVVSKRRNINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELRE 255
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F ++S +++ +R GR R +GF++F +AE+L++AL ++ GR + + A+E
Sbjct: 256 YFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALK-LDNTHFHGRNILVRQAHE 314
>gi|357165665|ref|XP_003580455.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform 1
[Brachypodium distachyon]
gi|357165668|ref|XP_003580456.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform 2
[Brachypodium distachyon]
Length = 286
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIRL 173
LYV NLP+++ + + ++FAE G V +++ ++ D R RGF FVTMGS EEA A+
Sbjct: 82 LYVANLPWTLPAVEIEKLFAECGVVKDVQVI--KMKDGRKRGFAFVTMGSAEEAAAAVEK 139
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
F+ + GR +KV F + R P++ ++ + + HK+Y NL W S ++
Sbjct: 140 FNSYDVMGRIIKVEFSKT----FRKPAPPRIPST----IFARHKLYVSNLAWKARSSDIK 191
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
AF Q +SA V+F+ +S G+GFV+F+T ED ++AL +NG E+ RP+ L +
Sbjct: 192 -AFFSQFNPISANVVFD--DKKSAGYGFVSFQTKEDAEAALSELNGKELLERPVLLRWRD 248
Query: 294 ER 295
++
Sbjct: 249 DK 250
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y NL W L + + F + G++ + + GR RGF FVT +AE+ +A++
Sbjct: 82 LYVANLPWTLPAVEIEKLF-AECGVVKDVQVIKMKDGRKRGFAFVTMGSAEEAAAAVEKF 140
Query: 278 NGVEVEGRPLRLNMAN---ERAPPVLPA 302
N +V GR +++ + + APP +P+
Sbjct: 141 NSYDVMGRIIKVEFSKTFRKPAPPRIPS 168
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 79 EDSQDEPETEQEEEEEEEAVEEEEEPKV--AASDEAAR------LYVGNLPYSMTSSSLA 130
+D ++ +TE EE+ E+EEEP V A++ R LYVGNL S+ L
Sbjct: 45 QDGEESNQTEIATEEKGNGEEQEEEPNVVPASATHGGRETSDRVLYVGNLDKSINEDLLK 104
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G + +I+ D+ +++ + FV +A A++ +G QI + +K+N+
Sbjct: 105 QYFQVGGQITDVKIMVDK-KNQNVNYAFVEYLKSHDANVALQTLNGIQIENKIIKINW-- 161
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
A + NS F ++ G+L + + L F+ P + A V+++
Sbjct: 162 -------AFQSQQNLNSNDTF-----NLFVGDLNIDVDDETLSSNFKNFPSYIQAHVMWD 209
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
T RSRG+GFV+F + Q+A+D M G E+ GRP+R+N A +R
Sbjct: 210 MQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATKR 254
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 26/204 (12%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E++E+ + +E EP + +L+VGNLP+++ S+ LA +F +AG V E + R
Sbjct: 72 EQDEDVLSDEGEPSFSPD---LKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEELEGRQLR 128
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
+ G A+ F G R NF PRGG
Sbjct: 129 VNSG--------PPPARRENSNFRGENSNFRGENTNF-RGPRGGAN-------------- 165
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
++S ++IY GNL WG+ L F Q + A+VI++R TGRSRGFGFVT+ +AE++
Sbjct: 166 LNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVN 225
Query: 272 SALDAMNGVEVEGRPLRLNMANER 295
A+++++GV++ GR +R+ MA R
Sbjct: 226 RAIESLDGVDLNGRSIRVTMAEAR 249
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + L F G V SA +V+DR + +SRGFG+V + + +AI
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQGL 232
DGS+I GR ++VN+ + E A ++ N Q SP ++ G+L + +T +
Sbjct: 257 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQ----SPPAETLWIGSLSFSVTEDQV 312
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+AF + S ++ +R TG +GFG+V F + +D +AL AMNG E+ GR +R++ A
Sbjct: 313 YEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFA 372
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L+ F+ ++SA+V+F+R + +SRGFG+V F DL S+ A+
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFA---DLGSSAKAI 254
Query: 278 --NGVEVEGRPLRLNMANERAP 297
+G E++GR +R+N A +R P
Sbjct: 255 EKDGSEIDGRAIRVNYATQRKP 276
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A L++G+L +S+T + E F + G V S + DR T +GFG+V SV++A A+
Sbjct: 295 AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAAL 354
Query: 172 RLFDGSQIGGRTVKVNF 188
+ +G++I GR ++V+F
Sbjct: 355 KAMNGAEIAGRAIRVDF 371
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL S+ SL + F G +A+ +I+ D+ ++ + FV +A A++
Sbjct: 85 LYVGNLDKSINEDSLKQYFQVGGPIANVKIIVDK-NNKYCNYAFVEYLKHHDANVALQTL 143
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G I + VK+N+ Q S Q D ++ G+L + + L
Sbjct: 144 NGKHIEKKIVKINW--------------AFQ-SQQSSNDDTFNLFIGDLNIDVNDESLTA 188
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF+ P + A V+++ TGRSRG+GF +F T D Q A+D M G E+ GRP+R+N A++
Sbjct: 189 AFKDFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASK 248
Query: 295 R 295
R
Sbjct: 249 R 249
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L ++F GTV S EI D T SRG FVTM S+ EA+ AI
Sbjct: 125 LFVCNLPRRCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVTMRSLAEARTAINAL 184
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG ++ GR V V + + +SPHK+Y GNL W + Q LR+
Sbjct: 185 DGFELDGREVFVKLASDVISNRKNVNLAHITPMKDHIFESPHKVYVGNLAWSVQPQDLRE 244
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
F ++S +++ +R GR+R +GF++F +AE+L++AL
Sbjct: 245 LFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAEELEAAL 284
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNL +S+ L E+F + GTV S ++ DR R+R +GF++ S EE + A++L
Sbjct: 227 KVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAEELEAALKL 286
Query: 174 FDGSQIGGRTVKV 186
D + GR + V
Sbjct: 287 -DRTVFFGRDIVV 298
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P +++ NL Q L F +LS ++ + TG SRG FVT + + ++A+
Sbjct: 122 PRELFVCNLPRRCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVTMRSLAEARTAI 181
Query: 275 DAMNGVEVEGRPLRLNMANE 294
+A++G E++GR + + +A++
Sbjct: 182 NALDGFELDGREVFVKLASD 201
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
E+EEE K ++VG L +++ LA FAE G V SA + DR T +SRGFG
Sbjct: 336 AEQEEESKT--------IFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFG 387
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVN-FPEVPRGGERAAMGPKLQNSYQGFVDS-- 214
V ++AI +G +I GR V V+ P + + +R +N + F DS
Sbjct: 388 HVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQR-------ENRAKAFGDSTS 440
Query: 215 -PHKI-YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
P + + GNL W T + +AF + S ++ +R +GR +GFG+V F + ++
Sbjct: 441 APSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKA 500
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A +A++G E+ GR +RL+ + R
Sbjct: 501 AFEALSGTEIGGRSIRLDYSQPR 523
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P ASD ++VG L +++ + LA+ FAE G V SA + DR T +SRGFG+VT +
Sbjct: 35 PAEEASDATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFAT 94
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI-YAGN 222
VE AI +G +I GR V ++ + + ++ A+ K +Y P + + GN
Sbjct: 95 VEAVDAAIAQ-NGKEIDGRAVNID-KSIEK--DKGAVRQKRAEAYGDKASEPSSVLFVGN 150
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L W T L + F + S +V +R TG+ +GF +V F E + A + G EV
Sbjct: 151 LSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEV 210
Query: 283 EGRPLRLNMANERAP 297
GR +R++ + R P
Sbjct: 211 AGRNIRVDFSQPRDP 225
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS+ ++ L+VGNL + T +L E F E G + S + DR T + +GF +V +E +
Sbjct: 139 ASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEAS 198
Query: 168 KEAIRLFDGSQIGGRTVKVNF--PEVPRG 194
K+A G+++ GR ++V+F P P G
Sbjct: 199 KKAFEGAAGAEVAGRNIRVDFSQPRDPNG 227
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
++ + EEE ++ K ++D + L+VGNL +++ L F G ++ I+ +R
Sbjct: 201 KKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMTER 260
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
T RSRGFG+V AK A +++ GRT+ +++ + PR A K Q
Sbjct: 261 ETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAK-PRDANSQAPREKAQTRA 319
Query: 209 QGFVD--SP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
+ F D SP + ++ GNL +G+ +R+ F+GQ + ++ + TGR +G+G+V F
Sbjct: 320 RSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEF 379
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ ++ + AL+ + G ++ GR +RL+ + R
Sbjct: 380 SSVDEARQALNELQGTDIGGRAIRLDFSTPR 410
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L+VGNL + + +++ EVF G + + D T R +G+G+V SV+EA+
Sbjct: 327 SPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEAR 386
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPR-GGER 197
+A+ G+ IGGR ++++F PR GER
Sbjct: 387 QALNELQGTDIGGRAIRLDF-STPRPQGER 415
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 14/208 (6%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
EEE+E E A L+VG L +++ L E F V SA ++ +R T RSRG+G
Sbjct: 245 AEEEQETPSKKPKEVATLFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGRSRGYG 304
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVD 213
+V S E+A++A+ F G +I GR + ++ P+ P + K Q+ + + D
Sbjct: 305 YVDFESKEQAQKALEQFQGREIEGRPINLDMSTSKPQTP------SQNQKFQDRAKKYGD 358
Query: 214 SPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+P + ++ GNL + L++ F+ +L ++ + + +GFG+V F + ++
Sbjct: 359 TPSQPSDTLFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDE 418
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAP 297
++AL+A+NG + GRP+RL+ + R P
Sbjct: 419 AKAALEALNGEYIAGRPVRLDFSAPRDP 446
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 7/167 (4%)
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP-- 189
+F GTV S E+ + T SRG G+VTM S+ EAK AI DGS +GGR ++V F
Sbjct: 1 MFKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTD 60
Query: 190 -EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
R A ++N +SP+K+Y GNL W + + LR+ F ++SA+V+
Sbjct: 61 MNFRRRNSEALNSAPMRNL---IFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVV 117
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+R G+ R +GF++F +A + ++A+ ++NG E GR L ++ +R
Sbjct: 118 HDRKAGKHRAYGFLSFSSAAECEAAM-SLNGKEFRGRSLVVSAGMKR 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNL +++ L F++ GTV SA +V+DR + R +GF++ S E + A+ L
Sbjct: 86 KLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRAYGFLSFSSAAECEAAMSL 145
Query: 174 FDGSQIGGRTVKVN 187
+G + GR++ V+
Sbjct: 146 -NGKEFRGRSLVVS 158
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L +F GTV S E+ D T SRG GFVTM S+ A+ A+
Sbjct: 103 LFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGFVTMRSLAAARTAMNAL 162
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS---YQGFVDSPHKIYAGNLGWGLTSQG 231
DG + GR + V R P L ++ +SP+KIY GNL W + Q
Sbjct: 163 DGFDLDGREMFVKLASHVVSNRR---NPSLSHTAPMKDHIFESPYKIYVGNLAWSVQPQH 219
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
LR+ F ++S +++ +R R+R +GF++F + E+L +AL +N GR + +
Sbjct: 220 LRELFTQCGNIVSTRLLTDRKGARNRVYGFLSFSSPEELDAALK-LNNTNFHGRDIIVRE 278
Query: 292 ANERAPPVL 300
A+ ++P L
Sbjct: 279 AHVKSPHTL 287
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 14/193 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A L+VG L +++ L F +G V SA ++ +R T +SRG+G+V S +A++A
Sbjct: 1 EPATLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKA 60
Query: 171 IRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGW 225
++ F G +I GR + ++ P+ P +RA + V +P ++ GNL +
Sbjct: 61 LQDFQGKEIDGRPINLDLSTSKPQTPAKNDRA-------KKFGDVVSAPSDTLFIGNLSF 113
Query: 226 GLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
T L +AF GQ G ++S ++ T + +GFG+V + + E+ ++AL+A+NG +EG
Sbjct: 114 NATRDKLFEAF-GQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAALEALNGEYIEG 172
Query: 285 RPLRLNMANERAP 297
RP RL+ + R P
Sbjct: 173 RPCRLDYSTPRDP 185
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++ G L W + L+ F+ G++SA+VI ER TG+SRG+G+V FE+ D + AL
Sbjct: 2 PATLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKAL 61
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
G E++GRP+ L+++ + P PA +
Sbjct: 62 QDFQGKEIDGRPINLDLSTSK--PQTPAKND 90
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 6/215 (2%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
P +++ +E +EA ++ + A SD+ A L+VG+L +++ L E F G V SA +
Sbjct: 225 PSKKRKADEPKEAPTKKSKTDAAESDKPATLFVGSLSWNVDDDMLKEEFKFCGEVVSARV 284
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+ DR T RS+GFG+V S +A++A G+ I GR +KV+F +A K
Sbjct: 285 ITDRETGRSKGFGYVDFASPADAEKAHAEKQGAFIDGRQIKVDFSTGKSNNNDSADRAK- 343
Query: 205 QNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
G V SP ++ GNL + + + F + S ++ ++ +GR +GFG+V
Sbjct: 344 ---KFGDVTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYV 400
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+F + ED +SA ++G + GRP RL+ + + P
Sbjct: 401 SFNSVEDAKSAFTQLSGQSINGRPCRLDYSTPKPP 435
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
+LY+GNL YS L VF G V + +R T R RGFGFVT+ + + A++AI
Sbjct: 19 VKLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIA 78
Query: 173 LFDGSQIGGRTVKVNFPEVPRG---GER----AAMGPKLQNSY--QGFVDSPHKIYAGNL 223
D SQ+ GRT++VN PRG G R GP ++ QG D K+Y GNL
Sbjct: 79 KMDQSQLDGRTIRVN-ESRPRGEGPGARRSNEPGTGPGGYGAFNPQGREDV--KLYVGNL 135
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVI-FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+ + +R F+ Q G +S + +R TGR RGF FVT A++ ++A + +NG+E+
Sbjct: 136 SFDTNEEAVRSMFE-QYGTVSDCFLPSDRDTGRPRGFAFVTMP-AKEAETACNKVNGMEL 193
Query: 283 EGRPLRLNMANERA 296
+GR +R+N A +
Sbjct: 194 DGRTVRVNEAQPKV 207
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 87 TEQEEEEEEEAVEEE--------EEPKVAASD--EAAR------LYVGNLPYSMTSSSLA 130
+EQE E+ VE E EEP V ++ + R LYVGNL S+ L
Sbjct: 2 SEQENLEQNPTVESEVPASETISEEPSVVPANAIKGGRETSDKVLYVGNLDTSINEEILK 61
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
+ F G +A+ +I+ D+ + + + FV +A A++ +G QI VK+N+
Sbjct: 62 QYFQVGGPIANVKIMVDK-NNSNANYAFVEYFQSHDANIALQTLNGKQIENNVVKINW-- 118
Query: 191 VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
Q+ ++ ++ G+L + + LR+AF+ P L V+++
Sbjct: 119 ------------AFQSQQVSPDEATFNLFVGDLNVDVDDETLRNAFKEFPTYLQGHVMWD 166
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
TG SRG+GFV+F + E+ Q A+DAM G E+ GRPLR+N A++
Sbjct: 167 MQTGGSRGYGFVSFGSQEEAQKAMDAMQGHELNGRPLRINWASK 210
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 110/182 (60%), Gaps = 6/182 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + LA+ FA+ G + SA + DR T +SRGFG+V + + ++A+++
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQM- 59
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGLR 233
+G +I GR +KV+ +PR +++ + K ++ V +P ++ GNL +G+T +
Sbjct: 60 NGQEIDGRAIKVD-RSLPR--DKSQVREKRAQAFGDEVSAPSSTLFVGNLSFGVTEDTVW 116
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+F G+ S ++ +R TGR +GFG+V FE + + A +A NG E+EGR +RL+ +
Sbjct: 117 -SFFNDYGVKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEAANGSEIEGRSIRLDYSQ 175
Query: 294 ER 295
R
Sbjct: 176 PR 177
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 108/195 (55%), Gaps = 13/195 (6%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
PK A ++E L+V +LP ++T+ SLAE F+E V A +V D+ T SRGFGFVT+
Sbjct: 33 PKKARTEERRSLFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLAD 92
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG--PKLQNSYQGFVDSPHKIYAG 221
++AK+A +FD + RT++V E PR + A G P+ + F +P K+
Sbjct: 93 ADDAKQAQIVFDKKRWEDRTIRVEVAE-PRQRKEATEGAQPRQKPGKPEFEPTP-KLIVR 150
Query: 222 NLGWGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDLQSALDAM 277
NL W + S+ L F+ KV F + G+ +GFGFVT ++ + AL+ +
Sbjct: 151 NLPWSIRNSEQLGHLFRS-----YGKVKFADLPKNKGKLKGFGFVTLRGKKNAEKALEGI 205
Query: 278 NGVEVEGRPLRLNMA 292
NG E++GR L ++ A
Sbjct: 206 NGKEIDGRTLAVDWA 220
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+SD + ++V NLP++ L F+ G V A +V D+ TDR G FV E+A
Sbjct: 314 SSDNSCTIFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDA 373
Query: 168 KEAIR 172
K I+
Sbjct: 374 KTCIK 378
>gi|226499642|ref|NP_001147738.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195613392|gb|ACG28526.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414585685|tpg|DAA36256.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 272
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NLP+S + + ++FA+ GTV E++ + R+RGF FVTM + EEA A
Sbjct: 67 KLYVANLPWSFPAPEIEKLFAQHGTVKDVEVIKGK-DGRNRGFAFVTMSTAEEAAAAADK 125
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ + GRT+KV F + R G + HK+Y NL W + ++
Sbjct: 126 LNSHDVMGRTIKVEFSKSFRR--------PAPPPPPGTIIERHKLYVSNLPWKARAPNVK 177
Query: 234 DAFQG-QPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F P LSA VIF+ G++ G+GFV+F T E+ ++AL ++G E+ GRP+RLN
Sbjct: 178 EFFANFNP--LSANVIFD--NGKAAGYGFVSFGTKEEAEAALTELDGKELLGRPVRLNW 232
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 98 VEEEEEPKVAASDEA--ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
V E+ E +A A R+YVGNLP+++ +L + +AGTV A+++ + S+G
Sbjct: 141 VREDREENASAQPRAKGCRVYVGNLPWTVKWQALKDHMKQAGTVIHADVL-EEAGGWSKG 199
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER------------------ 197
G V + +EA+ AI + + +++ GR + V P GG
Sbjct: 200 CGLVEFSTPDEAQNAIDMLNDTELEGRNIFVREDREPDGGSITSIARRGGRGGRSSGGRG 259
Query: 198 ----AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
A GP+ NS ++Y GNL W TS+ L + FQ + A+V+ E
Sbjct: 260 NSRFAGRGPREGNSGHSHSSDVKQVYVGNLPWDTTSRNLENLFQSAGDVERAEVV-EFPD 318
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
GRSRGFG V F+++ + Q A+D +NG E GR L + +
Sbjct: 319 GRSRGFGIVKFKSSSEAQCAIDELNGTEHNGRRLEVRL 356
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R+YVGNL + + L + AG V A I+ V RS+G G VT + EA+ AI
Sbjct: 71 RVYVGNLSWKVKWQDLKDHMRSAGDVEHAVIM--EVGGRSKGCGIVTYATESEAQNAIET 128
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ +++ GR + F R E A+ P+ + ++Y GNL W + Q L+
Sbjct: 129 LNDTELDGRKI---FVREDR-EENASAQPRAKGC---------RVYVGNLPWTVKWQALK 175
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
D + Q G + + E G S+G G V F T ++ Q+A+D +N E+EGR +
Sbjct: 176 DHMK-QAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDMLNDTELEGRNI 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y GNL W + Q L+D + G + VI E GRS+G G VT+ T + Q+A++
Sbjct: 71 RVYVGNLSWKVKWQDLKDHMR-SAGDVEHAVIME-VGGRSKGCGIVTYATESEAQNAIET 128
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAK 304
+N E++GR + + E P AK
Sbjct: 129 LNDTELDGRKIFVREDREENASAQPRAK 156
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 84 EPETEQEEEEEEEAVEEEEE----PKV--AASDEAAR------LYVGNLPYSMTSSSLAE 131
EP +Q E + EE EE P V A + R LYVGNL S+T L +
Sbjct: 38 EPSQKQAASEADVVPEENEEANKEPPVVPANATHGGRETSDRVLYVGNLDKSITEDILKQ 97
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
F AG + +++ D+ ++ + FV +A A++ +G QI VK+N
Sbjct: 98 YFQVAGQIVDVKVMIDKKSNYV-NYAFVEYAKAHDASVALQTLNGIQIENNKVKIN---- 152
Query: 192 PRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
RA Q+ DS ++ G+L + L +F+ P + A V+++
Sbjct: 153 -----RA-----FQSQQSTTDDSTFNLFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDM 202
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TGRSRG+GFV+F E Q A++ M G E+ GRP+R+N A +R
Sbjct: 203 QTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINWATKR 246
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 87 TEQEEEEEEEAVEE-EEEPKVAASDEA-ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
TE ++ +A +E +E PK A SD+A L+ G+L + + ++L E F G + SA +
Sbjct: 175 TEAAPSKKRKAEDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARV 234
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAM 200
V D+ T RSRGFG+V G E A +A G +I GR + +++ P + +RAA
Sbjct: 235 VTDKNTGRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAAD 294
Query: 201 GPKLQ-NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
K ++ D+ ++ GNL + +R F + S ++ + +G +GF
Sbjct: 295 RAKRHGDTLSAESDT---LFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGF 351
Query: 260 GFVTFETAEDLQSALDAMNGVEV----EGRPLRLNMANERAP 297
G+VTF + ED +SALDA NG + R +RL+ A R P
Sbjct: 352 GYVTFNSIEDAKSALDAKNGASIGNGRNSRAVRLDFAGSRPP 393
>gi|115476954|ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group]
gi|42408160|dbj|BAD09298.1| putative RNA-binding protein cp33 [Oryza sativa Japonica Group]
gi|113624042|dbj|BAF23987.1| Os08g0483200 [Oryza sativa Japonica Group]
gi|125561943|gb|EAZ07391.1| hypothetical protein OsI_29641 [Oryza sativa Indica Group]
gi|125603790|gb|EAZ43115.1| hypothetical protein OsJ_27706 [Oryza sativa Japonica Group]
gi|215686913|dbj|BAG90783.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701414|dbj|BAG92838.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 269
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
RL N+P+ T+ + +F + G+V E+ +Y+ + R+RG FVTMGS EEA A+
Sbjct: 74 RLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYN--STRNRGLAFVTMGSEEEALSALN 131
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + + RT+KV+F + P + H ++ GNL W + S+ L
Sbjct: 132 HLNSTTLNDRTIKVDFTRSRKKQYVVPSAPMPK----------HSVFVGNLTWRVRSRHL 181
Query: 233 RDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
R+ F PG+ S +V+F + RS G+GFV+F + E ++A+ NG ++ GR + +
Sbjct: 182 RELFASTPGVQSVEVVFHTTSPRRSAGYGFVSFSSKEAAEAAISTFNGTKLMGRSINVMF 241
Query: 292 ANERA 296
++ A
Sbjct: 242 KDDNA 246
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
SD ++VG L +++ L F G V A + DR T RS+GFG+V+ + E A+
Sbjct: 387 SDANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAE 446
Query: 169 EAIRLFDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSYQGFVDSPHKI-YAGNLGW 225
+AI +G +I GR V VN P+ P RA + V + K+ + GN+ +
Sbjct: 447 KAIAEMNGKEIDGRAVNVNAATPKTPNPAGRA-------KQFGDTVSAESKVLFVGNVSF 499
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
L + F ++S ++ +R TG+ +GFG+V F + E+ +SA +A+NG ++ GR
Sbjct: 500 NANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGKDIAGR 559
Query: 286 PLRLNMANER 295
+RL+ + R
Sbjct: 560 NIRLDFSQPR 569
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
D+ I+ G L W + + L+ F+ ++ A V +R TGRS+GFG+V+F T E +
Sbjct: 388 DANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEK 447
Query: 273 ALDAMNGVEVEGRPLRLNMANERAP 297
A+ MNG E++GR + +N A + P
Sbjct: 448 AIAEMNGKEIDGRAVNVNAATPKTP 472
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 11/197 (5%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S E ++VG L + +T+ SL E F G + SA +V DR T +SRGFG+V
Sbjct: 282 AGSTEIKNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAG 341
Query: 167 AKEAIRLFDGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNL 223
AK A+ + G+++ GRT+ V+ P PR G A PK Q + + +P + ++ GNL
Sbjct: 342 AKAALEMA-GTELDGRTINVDLSAPRPPRDGPGAT--PKKQ--FNDELSAPSQTVFVGNL 396
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD---AMNGV 280
+ T + ++F G+ S +V + TGR +GF +V F + + A+D + G+
Sbjct: 397 SFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVDQGRSSEGL 456
Query: 281 EVEGRPLRLNMANERAP 297
E++GR +RL+ + R P
Sbjct: 457 EIDGRRVRLDFSQPRQP 473
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L WG+T++ L++AF+ ++SA+V+ +R TG+SRGFG+V F A ++AL+ M
Sbjct: 290 VFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE-M 348
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKETKTEN 310
G E++GR + ++++ R P P A K N
Sbjct: 349 AGTELDGRTINVDLSAPRPPRDGPGATPKKQFN 381
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 16/192 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L++GNL +++ L F+E G ++ IV DR T RSRGFG+V S +A +A+
Sbjct: 281 ANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAME 340
Query: 173 LFDGSQIGGRTVKVNFPEVPR-----GGERAAMGPKLQNSYQGFVD--SPHK--IYAGNL 223
G+ + GRT+ +++ PR G +R+ Q+ + + D SP ++ GNL
Sbjct: 341 AKKGTDLDGRTINLDY-AAPRQANTQGADRS------QDRARSYGDQTSPESDTLFVGNL 393
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ T L + F Q +L ++ E+ TGR +GFG+V F + ++ ++A A+NG E+E
Sbjct: 394 PFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELE 453
Query: 284 GRPLRLNMANER 295
GR +RL+ + R
Sbjct: 454 GRAIRLDFSTPR 465
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L+VGNLP+S T +L EVF G+V + ++ T R +GFG+V S++EAK
Sbjct: 382 SPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAK 441
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPR 193
A +G ++ GR ++++F PR
Sbjct: 442 AAHAALNGHELEGRAIRLDF-STPR 465
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDE-AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
EQ ++ + +A E ++ + DE A L+VG L +++ L F G V A ++Y
Sbjct: 265 EQSKKRKSDASETQDSKRTKKQDEEPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIY 324
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV-PRGGERAAMGPKLQ 205
++ + +SRG+G+V + +A+ A++ + G +I GR + ++ E PR P+
Sbjct: 325 EKASGKSRGYGYVDFETKSQAQHALKEYQGREIDGRPINLDMSESKPR-----PSNPRFD 379
Query: 206 NSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ Q F D P ++ GNL + L D F ++S ++ T + +GFG+
Sbjct: 380 RAKQ-FGDVPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGY 438
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ F T ++ ++AL+A+NG VEGRP RL+ + R
Sbjct: 439 IEFSTVDEAKAALEALNGEYVEGRPCRLDFSTPR 472
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++ G L W + + L+ F+ G+ A+VI+E+ +G+SRG+G+V FET Q AL
Sbjct: 290 PATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHAL 349
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLP 301
G E++GRP+ L+M+ + P P
Sbjct: 350 KEYQGREIDGRPINLDMSESKPRPSNP 376
>gi|413941709|gb|AFW74358.1| hypothetical protein ZEAMMB73_309849 [Zea mays]
Length = 826
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L E+F GTV S EI D + SRG VTM S+ EA+ AI
Sbjct: 643 LFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAIDAL 702
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG + GR V V + + + ++PHK+Y GNL W + Q LR+
Sbjct: 703 DGFDMDGREVFVKLASDVISNRKNVNLAHITPTKDHIFETPHKVYVGNLAWSVQPQDLRE 762
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
F ++S +++ +R GR+R +GF++F +A++L+ AL
Sbjct: 763 LFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEAL 802
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNL +S+ L E+F + GTV S ++ DR R+R +GF++ S +E +EA++L
Sbjct: 745 KVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEALKL 804
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
D + GR + V V R
Sbjct: 805 -DRTVFFGRDIVVKEAHVER 823
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P +++ NL Q L + F +LS ++ + +G SRG VT + + ++A+
Sbjct: 640 PRELFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAI 699
Query: 275 DAMNGVEVEGRPLRLNMANE 294
DA++G +++GR + + +A++
Sbjct: 700 DALDGFDMDGREVFVKLASD 719
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 15/221 (6%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
S D ++ ++E+ + +++ P E A ++VG L +S+ L F G V
Sbjct: 184 STDSANLDRSKDEKSQKKHKKDSPT-----EPATIFVGRLSWSIDDEWLKTEFEHIGGVI 238
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA ++Y+R T+RSRG+G+V A++AI+ G +I GR + V+ + A
Sbjct: 239 SARVIYERGTERSRGYGYVDFEDKSYAEKAIKEMQGKEIDGRPINVDM-----STSKPAS 293
Query: 201 GPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
PK ++ + F D P + ++ GNL + + + F+ ++S ++ T +
Sbjct: 294 NPK-EDRAKKFGDVPSQPSDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQP 352
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+GFG+V + + E+ Q ALD + G ++ RP+RL+ ++ R P
Sbjct: 353 KGFGYVQYASIEEAQKALDKLQGEYIDNRPVRLDFSSPRPP 393
>gi|356560231|ref|XP_003548397.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 271
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 20/274 (7%)
Query: 16 NKLYNLQAITQIPTNHLPSLFKTKSPKPLKLEKAQNPSALHLSLLSLSYFRQFSASFDGF 75
N L++ A P++ S+ LKL+K Q + +L +Y R+ +
Sbjct: 6 NTLFHTHAFVVTPSSSYSSV------HTLKLQKPQ----VKRFVLLFAYPRRSRTFLEPS 55
Query: 76 QVTEDSQDEPETEQEEEE-----EEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLA 130
+ +T++ EE E + V E+EE + +A +YV NLP S ++ L
Sbjct: 56 TSSSSFSPVRKTKEVAEEYVYPPENDDVLEDEEEREKRLGKACEVYVCNLPRSCDAAYLL 115
Query: 131 EVFAEAGTVASAEIVYDRV-TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP 189
++F GT+ S E+V + S+G +VT+GS+ A+ A+ DGS +GG ++V F
Sbjct: 116 DMFRPYGTILSIEVVCRNAENNESKGCSYVTLGSIHSARNAVAALDGSDVGGCELRVRF- 174
Query: 190 EVPRGGERAAMGPKLQNSYQ--GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKV 247
+ R + K+ +S + + +SPHK+Y GNL + + LRD F ++SA+V
Sbjct: 175 SIEMNSRRRSFN-KMNSSTKRISYYESPHKLYVGNLAKTVRPEQLRDLFCRFGNIVSARV 233
Query: 248 IFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
+ + G SR + F++F++ E L GVE
Sbjct: 234 LRDFKQGNSRVYAFLSFQSEEFYGRTLIVKEGVE 267
>gi|6715645|gb|AAF26472.1|AC007323_13 T25K16.8 [Arabidopsis thaliana]
Length = 679
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV-YDRVT 150
E +++V + EP LYV N+P S + L ++F GTV S E+V + T
Sbjct: 445 EPNKDSVVSKAEP--VKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQT 502
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGS---------QIGGRTVKVNFPEVPRGGERAAMG 201
SRG G+VTMGS+ AK AI DG+ ++GGR ++V + G R
Sbjct: 503 GESRGSGYVTMGSINSAKIAIASLDGTVRARETKKQEVGGREMRVRYSVDMNPGTRR--N 560
Query: 202 PKLQNSYQGFV---DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
P++ NS + +S HK+Y GNL W GLR+ F ++S +V+ +R TGR+R
Sbjct: 561 PEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRV 620
Query: 259 FGFVTFETAEDLQSALDAMNG 279
F F++F + E+ +AL + NG
Sbjct: 621 FAFLSFTSGEERDAAL-SFNG 640
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + S L FA G V S +I+ +++T + G+GFV S A+
Sbjct: 17 EEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 76
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L +
Sbjct: 77 ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLAPDV 124
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ Q P + AKV+ + TGRS+G+GFV F + A+ MNG RP
Sbjct: 125 TDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRP 184
Query: 287 LRLNMANERAPPVL 300
+R++ A + P V
Sbjct: 185 MRISAATPKKPLVF 198
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A+ +V A++V D T RS+G+GFV E A+
Sbjct: 115 IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSE 174
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSYQGF---------------VDSPH 216
+G R ++++ P+ P + K+ N+ + D+ +
Sbjct: 175 MNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANN 234
Query: 217 K-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
I+ GNL +T + L+ F L ++ + + +G GFV F T + A+
Sbjct: 235 TTIFVGNLDPNITEEELKQTF-----LQFGEIAYVKIPA-GKGCGFVQFGTRASAEEAIQ 288
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKETKT 308
M G + + +R + PAAK+ T
Sbjct: 289 KMQGKIIGQQVVRTSWGRN------PAAKQDLT 315
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V+ ++ G+L + + L F ++S K+I + TG+ G+GFV F + +
Sbjct: 16 VEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAE 75
Query: 272 SALDAMNGVEVEG--RPLRLNMAN----ERAPPVLP 301
L NG ++ G + RLN A+ ER P P
Sbjct: 76 RILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 111
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE A++YVGNL + T+ L F E G V + D +RGFGF+ M S E++ +
Sbjct: 193 DEGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVD-YDGNARGFGFIQM-SDEDSLK 250
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI +G + GRT+ VN +P+G AA PK K+Y GNL WG
Sbjct: 251 AIEGMNGVEFDGRTLNVN-KSLPKGQRPAAAAPKET-----------KLYVGNLSWGTEE 298
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
LR+ F ++ + +R TG+ RGF FVT + L++A D +G E++GR LR+
Sbjct: 299 GALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTMGPDDALRAA-DETDGYELDGRILRV 357
Query: 290 NMA 292
N A
Sbjct: 358 NEA 360
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 7/169 (4%)
Query: 140 ASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA 199
S ++ R T + RGF FV M + ++ + AI + S+I GRT+ V+ +P+ ++ A
Sbjct: 124 GSVDVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVS-ESLPK--DQVA 180
Query: 200 MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
K + + D KIY GNL + T++ L+ AF+ ++ + + Y G +RGF
Sbjct: 181 E-KKKKFQGRKKRDEGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVD-YDGNARGF 238
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP-PVLPAAKETK 307
GF+ + ED A++ MNGVE +GR L +N + + P A KETK
Sbjct: 239 GFIQM-SDEDSLKAIEGMNGVEFDGRTLNVNKSLPKGQRPAAAAPKETK 286
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P AA E +LYVGNL + +L E+F E G+V I DR T + RGF FVTM
Sbjct: 275 QRPAAAAPKET-KLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTM 333
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
G ++A A DG ++ GR ++VN + P+G +N+Y + D + Y G
Sbjct: 334 GP-DDALRAADETDGYELDGRILRVNEAQ-PKG---------QRNNYNSYNDGGN--YDG 380
Query: 222 NLGW 225
+ W
Sbjct: 381 DDAW 384
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 236 FQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F + G S V R TG+ RGF FV ++D ++A++ +N E+ GR +
Sbjct: 117 FSPKRGGGSVDVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTI 168
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
gi|414869196|tpg|DAA47753.1| TPA: ribonucleoprotein [Zea mays]
Length = 275
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 114/214 (53%), Gaps = 21/214 (9%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
RL N+P+ T+ + +F G+V E+ +Y +++RG FVTMGS EEA A+
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMYS--ANKNRGLAFVTMGSEEEALAALT 129
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPK----LQNSYQGFVDSPHKIYAGNLGWGLT 228
+ + + R +KV+F PR + PK + + + +V ++ GNL W +
Sbjct: 130 HLNSTILNDRKIKVDFAR-PRKKQ-----PKQPAVVSDDTEKYV-----VFVGNLTWRVR 178
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
++ LR+ F PG++SA+VIF T RS G+ FV+F + E +A+ A NG + GRP+
Sbjct: 179 NRHLRELFASAPGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGKILMGRPI 238
Query: 288 RLNMANERAPPVLPAA--KETKTENSIDGSELLS 319
+ +E P++ K+ + E S D S+ LS
Sbjct: 239 NVMFKDENGEKNEPSSVPKKAEVEPSDDQSDKLS 272
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 119/219 (54%), Gaps = 13/219 (5%)
Query: 86 ETEQEEEEEEE---AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
+T++ + E +E A + ++E AS E++ L+VGNL +++ L F G ++
Sbjct: 234 KTQKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGV 293
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAM 200
IV DR + RSRGFG+V + E+A +A + ++I GRT+ ++F + GG R
Sbjct: 294 RIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGAR--- 350
Query: 201 GPKLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+ Q+ + F D SP ++ GN+ + +++ F +L ++ + +GR
Sbjct: 351 -DRAQSRAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRP 409
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+GFG+V F + ++ +SA +A+ G E+ GR +RL+ + R
Sbjct: 410 KGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPR 448
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 119/219 (54%), Gaps = 13/219 (5%)
Query: 86 ETEQEEEEEEE---AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
+T++ + E +E A + ++E AS E++ L+VGNL +++ L F G ++
Sbjct: 232 KTQKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGV 291
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAM 200
IV DR + RSRGFG+V + E+A +A + ++I GRT+ ++F + GG R
Sbjct: 292 RIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGAR--- 348
Query: 201 GPKLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+ Q+ + F D SP ++ GN+ + +++ F +L ++ + +GR
Sbjct: 349 -DRAQSRAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRP 407
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+GFG+V F + ++ +SA +A+ G E+ GR +RL+ + R
Sbjct: 408 KGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPR 446
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 18/198 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS+++A L+VGNL + + ++L E F V A +V D+ + RSRGFG+V + E A
Sbjct: 283 ASEKSATLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAA 342
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVP--------RGGERAAMGPKLQNSYQGFVDSPHK-- 217
++A +G+ + GR ++++F P R ERA G V SP
Sbjct: 343 EKAYNDKNGAFLQGREMRLDFAAKPSADSTPNARAAERA--------RKHGDVISPESDT 394
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL + + + F + S ++ ++ +GR +GF +VTF + +D ++A +A+
Sbjct: 395 LFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEAL 454
Query: 278 NGVEVEGRPLRLNMANER 295
NG +++GRP+RL+ A R
Sbjct: 455 NGSDLDGRPVRLDFAKPR 472
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNLGWG+ L + FQ G+ A+V+ ++ +GRSRGFG+V FET E + A +
Sbjct: 290 LFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKAYNDK 349
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAK 304
NG ++GR +RL+ A + + P A+
Sbjct: 350 NGAFLQGREMRLDFAAKPSADSTPNAR 376
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
EE P+ AS+E A L+VG L +++ L F EAG V SA ++ +R T +SRG+G+V
Sbjct: 171 EETPE--ASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVD 228
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSP- 215
S A++A+ G +I GR V ++ P+ P +RA + F D P
Sbjct: 229 FSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDRA----------KKFGDVPS 278
Query: 216 ---HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
++ GNL + L + F ++S ++ T + +GFG+V F + E+ Q+
Sbjct: 279 APSDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQN 338
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
AL+++NG ++GRP RL+ + R
Sbjct: 339 ALNSLNGEYLDGRPCRLDFSTPR 361
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++ G L W + + L+ F+ G++SA+V+ ER TG+SRG+G+V F + + AL
Sbjct: 180 PATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKAAAEKAL 239
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLPAAKE 305
+ + G E++GRP+ L+M+ + P PA+ +
Sbjct: 240 NELQGKEIDGRPVNLDMSTGK--PKTPASND 268
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P+ ++DE L++G+L Y M + L A G VAS +++ ++ T +S G+GF+ S
Sbjct: 52 PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTS 111
Query: 164 VEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ ++G+ + GG+ ++N+ + G R DSP H I+
Sbjct: 112 RAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHD-------------DSPDHTIFV 158
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L +T L++ F+ + P + AKV+ +R TGR++G+GFV F + A+ M G
Sbjct: 159 GDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQG 218
Query: 280 VEVEGRPLRLNMANERAP 297
V RP+R+ A+ + P
Sbjct: 219 VLCSTRPMRIGPASNKNP 236
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A ++ A++V DR+T R++G+GFV G E A+
Sbjct: 156 IFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTE 215
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-----------KIYAGN 222
G R +++ G + P Q+ + +P I+ GN
Sbjct: 216 MQGVLCSTRPMRI--------GPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGN 267
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L +T LR F L+ K+ + GFV F + AL +NG +
Sbjct: 268 LDPNVTDDHLRQVFGHYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTLL 321
Query: 283 EGRPLRLNM----ANERAPP 298
G+ +RL+ +N++A P
Sbjct: 322 GGQNVRLSWGRSPSNKQAQP 341
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 81 SQDEPETEQEEE---EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
S P T+ + + + + + E +P ++VGNL ++T L +VF G
Sbjct: 232 SNKNPSTQSQPKASYQNPQGAQNEHDPNNTT------IFVGNLDPNVTDDHLRQVFGHYG 285
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
E+V+ ++ R GFV A+EA+R+ +G+ +GG+ V++++ P
Sbjct: 286 -----ELVHVKIPAGKR-CGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 334
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E ++VG LP+ + + L + FA+ G + SA ++ DR T SRGFG+V + E+AK+A
Sbjct: 1 EYTSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKA 60
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWG 226
DG ++ GR ++ P+ + A P + + F D P + ++ GNL W
Sbjct: 61 KEEMDGYELDGRNIRTGTATKPQ--PKGAHDP--SSRARQFGDKPSEPSSTLFVGNLSWS 116
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T + F + G+ + ++ E TGR +GFG+V FE E + A +A+ G E++GR
Sbjct: 117 ATEDAVWGLFN-EYGVKNVRLPTEFETGRPKGFGYVEFEDIEGAKKAYEALAGAELDGRN 175
Query: 287 LRLNMANER 295
+RL+ + R
Sbjct: 176 IRLDYSQPR 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L + + + L+ F + SA V+ +R TG SRGFG+V F T E + A + M
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 278 NGVEVEGRPLRLNMANERAP 297
+G E++GR +R A + P
Sbjct: 65 DGYELDGRNIRTGTATKPQP 84
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S+ ++ L+VGNL +S T ++ +F E G V + + + T R +GFG+V +E AK
Sbjct: 102 SEPSSTLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAK 160
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPR 193
+A G+++ GR +++++ + PR
Sbjct: 161 KAYEALAGAELDGRNIRLDYSQ-PR 184
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DEA L++G+L Y M + L F++AG V S +I+ ++ T + G+GF+ G+ A++
Sbjct: 69 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQ 128
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + + K+N+ G +R G S + I+ G+L +
Sbjct: 129 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 176
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + P + SAKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 177 TDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRP 236
Query: 287 LRLNMANER 295
+RL A+ +
Sbjct: 237 MRLGPASNK 245
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F + +V SA++V+DR T RS+G+GFV ++E A+
Sbjct: 167 IFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTE 226
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDS-PHK--IYAGNLGWGLT 228
+G R +++ + GG+ QN+ DS P+ ++ G L +T
Sbjct: 227 MNGQYCSSRPMRLGPASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNNTTVFVGGLDPSVT 286
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+ F LL K+ + G FV + + A+ +NG ++ G+ +R
Sbjct: 287 DELLKQTFSPYGELLYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIR 340
Query: 289 LNMANERAPPVLPAAKETKTENS 311
L+ PA K+ + E +
Sbjct: 341 LSWGRS------PANKQPQQEQN 357
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 113/215 (52%), Gaps = 13/215 (6%)
Query: 90 EEEEEEEAVEEEEE---PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
+EE ++ + E E++ K + A ++VG L +S+ L F G V A ++Y
Sbjct: 141 KEESKKRSAESEDDAVAKKQKTDGQPATIFVGRLSWSVDDEWLKTEFDHIGGVVGARVIY 200
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
+R TD+SRG+G+V V A++A++ G +I GR + + + A P+ ++
Sbjct: 201 ERGTDKSRGYGYVDFEDVSYAEKAVKEMHGKEIDGRAINCDM-----STSKPASAPR-ED 254
Query: 207 SYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+ + D+P + ++ GNL + L + F ++S ++ + + +GFG+V
Sbjct: 255 RAKKYGDTPSQPSDTLFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYV 314
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+ + E+ Q+ALDA+ G ++ RP+R++ ++ R P
Sbjct: 315 QYGSVEEAQAALDALQGEYIDNRPVRIDFSSPRPP 349
>gi|223942613|gb|ACN25390.1| unknown [Zea mays]
Length = 164
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 8/149 (5%)
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE- 190
+FA GTV AE++YD+ T+RSR FGFVTM + EEA A+ +G+++G R +KVN E
Sbjct: 1 MFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTES 60
Query: 191 -VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF 249
+P +R+A P+ FVDS +K+Y GNL +T++ L++ F + +LSA V
Sbjct: 61 FLP-NIDRSAPEPEAL-----FVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSH 114
Query: 250 ERYTGRSRGFGFVTFETAEDLQSALDAMN 278
T +S+G+GFVTF + E++++A+ N
Sbjct: 115 IPGTSKSKGYGFVTFSSEEEVEAAVATFN 143
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EP+ D ++YVGNL ++T+ L F+E G + SA + + T +S+G+GFVT
Sbjct: 71 EPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFS 130
Query: 163 SVEEAKEAIRLFDGS 177
S EE + A+ F+ +
Sbjct: 131 SEEEVEAAVATFNNA 145
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 245 AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAK 304
A+V++++YT RSR FGFVT TAE+ +A++A+NG EV R +++N+ P + +A
Sbjct: 11 AEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAP 70
Query: 305 E 305
E
Sbjct: 71 E 71
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 98 VEEEEEPKVAASDEA--ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
V++ E + DE LYV NL MT + +F+ G + SA I+ D +SRG
Sbjct: 182 VKKSERTTATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDH-NGKSRG 240
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS- 214
FGFV S E+AK+A+ +G Q+ RT+ V R +A LQ+ Y+ ++
Sbjct: 241 FGFVDFESPEDAKKAVDALNGYQLESRTLFVG-----RAQAKAERKKILQHEYKDIFNTH 295
Query: 215 -----PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY-TGRSRGFGFVTFETAE 268
+Y NL + + L++ F ++SAKV+ RY G SRGFGFV F + E
Sbjct: 296 MEKFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAKVM--RYDNGASRGFGFVCFSSPE 353
Query: 269 DLQSALDAMNGVEVEGRPLRLNMA 292
+ + AL+A+NG +G+ L + MA
Sbjct: 354 EAKKALNALNGAVFQGKSLYVAMA 377
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NL S+ S+ L +F++ GT+ S ++V + +S+G+GFV S + A A
Sbjct: 109 LYVKNLDASIDSAGLQSLFSKFGTILSCKVVEEH--GKSKGYGFVQFDSEDSALAARTAL 166
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + + V+ + ER SY + +Y NL +T +
Sbjct: 167 HDTMLKEKKLYVS--RFVKKSERTT-----ATSYDELKFT--NLYVKNLSKDMTQDAFHN 217
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F ++SA VI + + G+SRGFGFV FE+ ED + A+DA+NG ++E R L + A
Sbjct: 218 MFSAFGEIISA-VIMQDHNGKSRGFGFVDFESPEDAKKAVDALNGYQLESRTLFVGRAQA 276
Query: 295 RA 296
+A
Sbjct: 277 KA 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T +L VF+ G + + + +T RS +G+V +A +A+
Sbjct: 21 LYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALSNL 80
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ +++ + + ++ +G +Y NL + S GL+
Sbjct: 81 NHTYLKGKLMRIMWCQRNPCARKSGIG---------------NLYVKNLDASIDSAGLQS 125
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS KV+ E G+S+G+GFV F++ + +A A++ ++ + L
Sbjct: 126 LFSKFGTILSCKVVEEH--GKSKGYGFVQFDSEDSALAARTALHDTMLKEKKL 176
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV-YDRVTDRSRGFGFVTMGSVEEAKE 169
+A+ LYV NL + + L E+F+ +G + SA+++ YD SRGFGFV S EEAK+
Sbjct: 300 KASNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYD--NGASRGFGFVCFSSPEEAKK 357
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
A+ +G+ G+++ V + R + A
Sbjct: 358 ALNALNGAVFQGKSLYVAMAQCKRDRQLA 386
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 16/192 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L++GNL +++ + F+E G ++ IV DR T RSRGFG+V S +A +A+
Sbjct: 211 ANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAME 270
Query: 173 LFDGSQIGGRTVKVNFPEVPR-----GGERAAMGPKLQNSYQGFVD--SPHK--IYAGNL 223
G+ + GRT+ +++ PR G +R+ Q+ + + D SP ++ GNL
Sbjct: 271 AKKGTDLDGRTINLDY-AAPRQANTQGADRS------QDRARSYGDQTSPESDTLFVGNL 323
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ T L + F Q +L ++ E+ TGR +GFG+V F + ++ ++A A+NG E+E
Sbjct: 324 PFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELE 383
Query: 284 GRPLRLNMANER 295
GR +RL+ + R
Sbjct: 384 GRAIRLDFSTPR 395
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L+VGNLP+S T +L EVF G+V + ++ T R +GFG+V S++EAK
Sbjct: 312 SPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAK 371
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPR 193
A +G ++ GR ++++F PR
Sbjct: 372 AAHAALNGHELEGRAIRLDF-STPR 395
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 10/204 (4%)
Query: 98 VEEEEEP--KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
VEEE P K +E A L+VG L +S+ L F G V SA ++++R T +SRG
Sbjct: 218 VEEEAAPAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRG 277
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
+G+V S A++A++ + G +I GR + ++ G+ A + + F D+P
Sbjct: 278 YGYVDFDSKSAAEKALKEYQGREIDGRPINLDMST----GKPHASNNRSNDRASKFGDTP 333
Query: 216 ----HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
++ GNL + L + F ++S ++ T + +GFG+V + + ++ +
Sbjct: 334 SAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAK 393
Query: 272 SALDAMNGVEVEGRPLRLNMANER 295
+AL+A+NG +EGRP+RL+ + R
Sbjct: 394 AALEALNGEYIEGRPVRLDFSAPR 417
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + S L FA G V S +I+ +++T + G+GFV S A+
Sbjct: 17 EEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 76
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L +
Sbjct: 77 ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLAPDV 124
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ Q P + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 125 TDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRP 184
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 185 MRISAATPK 193
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL ++T L + F + G +A +I +G GFV G+ A+EAI+
Sbjct: 232 IFVGNLDPNITEEELKQTFLQFGEIAYVKI------PAGKGCGFVQFGTRASAEEAIQKM 285
Query: 175 DGSQIGGRTVKVNFPEVP 192
G IG + V+ ++ P
Sbjct: 286 QGKIIGQQVVRTSWGRNP 303
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V+ ++ G+L + + L F ++S K+I + TG+ G+GFV F + +
Sbjct: 16 VEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAE 75
Query: 272 SALDAMNGVEVEG--RPLRLNMAN----ERAPPVLP 301
L NG ++ G + RLN A+ ER P P
Sbjct: 76 RILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 111
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
gi|195637832|gb|ACG38384.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 99/183 (54%), Gaps = 11/183 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
RL N+P+ T+ + +F G+V E+ +Y +++RG FVTMGS EEA A+
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMYS--ANKNRGLAFVTMGSEEEALAALT 129
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + + R +KV+F PR + PK Q + + ++ GNL W + ++ L
Sbjct: 130 HLNSTILNDRKIKVDFAR-PRKKQ-----PK-QPAVVSDATEKYVVFVGNLTWRVRNRHL 182
Query: 233 RDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
R+ F PG++SA+VIF T RS G+ FV+F + E +A+ A NG + GRP+ +
Sbjct: 183 RELFASAPGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGKILMGRPINVMF 242
Query: 292 ANE 294
+E
Sbjct: 243 KDE 245
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG-RSRGFGFVTFETAEDLQSALD 275
++ A N+ W T+ +R F+ ++ V Y+ ++RG FVT + E+ +AL
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVG--VELSMYSANKNRGLAFVTMGSEEEALAALT 129
Query: 276 AMNGVEVEGRPLRLNMANERAP-PVLPAAKETKTENSI 312
+N + R ++++ A R P PA TE +
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQPKQPAVVSDATEKYV 167
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 19/187 (10%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
RL N+P+ T+ + +F G+V E+ +Y ++RG FVTMGS E+A A+
Sbjct: 73 RLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYS--ASKNRGLAFVTMGSEEDALAALT 130
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPK----LQNSYQGFVDSPHKIYAGNLGWGLT 228
+ + + R +KV+F PR + PK + N + ++ ++ GNL W +
Sbjct: 131 HLNSTILNDRKIKVDFAR-PRKKQ-----PKQPVVVSNPMEKYI-----VFVGNLTWRVR 179
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
++ LR+ F PG++SA+VIF T RS G+ FV+F + E ++A+ A NG + GRP+
Sbjct: 180 NRHLRELFASAPGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAFNGKILMGRPI 239
Query: 288 RLNMANE 294
+ + +E
Sbjct: 240 NVMLKDE 246
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG-RSRGFGFVTFETAEDLQSALD 275
++ A N+ W T+ +R FQ ++ ++ Y+ ++RG FVT + ED +AL
Sbjct: 73 RLVAQNIPWDSTADEMRALFQTHGSVVGVEL--SMYSASKNRGLAFVTMGSEEDALAALT 130
Query: 276 AMNGVEVEGRPLRLNMANER 295
+N + R ++++ A R
Sbjct: 131 HLNSTILNDRKIKVDFARPR 150
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 9/210 (4%)
Query: 96 EAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
EA EE K D AA L+VGNL +++ L F E G + + ++ DR + RS
Sbjct: 234 EAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRS 293
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGF 211
+G+G+V S ++A +A+ G + R ++V+ PR P+ +++ + +
Sbjct: 294 KGYGYVEFESADDAAKALEARHGYTLDNRELRVDL-GTPRAQRNDGQTPQQRSNDRQKQY 352
Query: 212 VDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
D+P + ++ GN+ + T + + FQ + + ++ +R TG +GFG+V F +
Sbjct: 353 GDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSI 412
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAP 297
E+ +SA++ + GV++ GRP+RL+ + + P
Sbjct: 413 EEAKSAMENLTGVDIAGRPIRLDYSTPKPP 442
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S +A L+VGN+ + T + EVF E G++ + + DR T +GFG+V S+EEAK
Sbjct: 357 SQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAK 416
Query: 169 EAIRLFDGSQIGGRTVKVNF--PEVPR 193
A+ G I GR +++++ P+ PR
Sbjct: 417 SAMENLTGVDIAGRPIRLDYSTPKPPR 443
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 17/198 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P+ ++DE L++G+L Y M + L FA G +AS +++ ++ T +S G+GF+ S
Sbjct: 56 PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTS 115
Query: 164 VEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ ++G+ + GG+ ++N+ G R DSP H I+
Sbjct: 116 RAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHD-------------DSPDHTIFV 162
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L +T L++ F+ + P AKV+ +R TGR++G+GFV F + A+ M G
Sbjct: 163 GDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQG 222
Query: 280 VEVEGRPLRLNMANERAP 297
V RP+R+ A+ + P
Sbjct: 223 VLCSTRPMRIGPASNKNP 240
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A + A++V DR+T R++G+GFV G E A+
Sbjct: 160 IFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSE 219
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-----------KIYAGN 222
G R +++ G + P Q+ + +P I+ GN
Sbjct: 220 MQGVLCSTRPMRI--------GPASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGN 271
Query: 223 LGWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
L +T LR F GQ G L+ K+ + GFV F + AL +NG
Sbjct: 272 LDPNVTDDHLRQVF-GQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTL 324
Query: 282 VEGRPLRLNM----ANERAPP 298
+ G+ +RL+ +N++A P
Sbjct: 325 LGGQNVRLSWGRSPSNKQAQP 345
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 81 SQDEPETEQEEE---EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
S P T+ + + + + + E +P ++VGNL ++T L +VF + G
Sbjct: 236 SNKNPSTQSQPKASYQNPQGAQNEHDPNNTT------IFVGNLDPNVTDDHLRQVFGQYG 289
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
E+V+ ++ R GFV A+EA+R+ +G+ +GG+ V++++ P
Sbjct: 290 -----ELVHVKIPAGKR-CGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 338
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
PK A ++E L+V +LP ++T+ SLAE F+E V A +V D+ T SRGFGFVT+
Sbjct: 33 PKKARTEERRSLFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLAD 92
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNL 223
++AK+A + D Q GR+++V E + E A + Q + + K+ NL
Sbjct: 93 ADDAKQAQTVLDKKQWEGRSIRVEVAEPRQRKELAEGAERRQKPGKPEFEPTPKLIVRNL 152
Query: 224 GWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + S+ L F+ + A + ++ G+ +GFGFVT ++ ++AL+ +NG E+
Sbjct: 153 PWSIRNSEQLGHLFRSYGRIKFADLPKDK--GKLKGFGFVTLRGKKNAENALEGVNGKEI 210
Query: 283 EGRPLRLNMA 292
+GR L ++ A
Sbjct: 211 DGRTLAVDWA 220
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
+ +E + +SD + ++V NLP++ L F+ G + A +V D+ TDR G FV
Sbjct: 304 KRKEERNNSSDNSTTIFVRNLPFTTNDEKLKSFFSSFGNIRYARVVMDKATDRPAGTAFV 363
Query: 160 TMGSVEEAKEAIR 172
E+AK I+
Sbjct: 364 CFFEGEDAKACIK 376
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ +L +T++ L + F + A V+ ++ T SRGFGFVT A+D + A +
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLADADDAKQAQTVL 103
Query: 278 NGVEVEGRPLRLNMANER 295
+ + EGR +R+ +A R
Sbjct: 104 DKKQWEGRSIRVEVAEPR 121
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E+ ++VG L +++ + LA+ F GTV +A + DR + +SRGF +V S EA++A
Sbjct: 108 ESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKA 167
Query: 171 IRLFDGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+ +G QI GR V V+ P P +RA Q F DS + ++ GNL
Sbjct: 168 VEEMNGKQIDGREVNVDISQPRQPNPEKRA----------QVFGDSESQPSTTLFVGNLS 217
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W T GL AF + ++ ++ +G+ +GFG+V F E A +AM G +++G
Sbjct: 218 WNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLDG 277
Query: 285 RPLRLNMA 292
R LRL+ +
Sbjct: 278 RTLRLDYS 285
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L FQG +++A+V +R +G+SRGF +V F + + Q A++ M
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 278 NGVEVEGRPLRLNMANERAP 297
NG +++GR + ++++ R P
Sbjct: 172 NGKQIDGREVNVDISQPRQP 191
>gi|242076980|ref|XP_002448426.1| hypothetical protein SORBIDRAFT_06g026990 [Sorghum bicolor]
gi|241939609|gb|EES12754.1| hypothetical protein SORBIDRAFT_06g026990 [Sorghum bicolor]
Length = 278
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 15/176 (8%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV NLP+S + + ++FA+ GTV E++ + R+RGF FVTM + EEA A
Sbjct: 76 KLYVANLPWSFPAPEIEKLFAQHGTVKDVEVIKGK-DGRNRGFAFVTMSTTEEAAAAAEK 134
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ + GRT+KV F R + A + P ++ HK+Y NL W + ++
Sbjct: 135 LNSHDVMGRTIKVEFSRSFR--KPAPLPPIIER---------HKLYVSNLPWKARAPNVK 183
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ F + LSA VIF+ G++ G+ FV+F T E+ ++AL ++G E+ GRP+RL
Sbjct: 184 EFF-AKFNPLSANVIFD--NGKAAGYCFVSFGTKEEAEAALTELDGKELMGRPVRL 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +LYV NLP+ + ++ E FA+ + SA +++D ++ G+ FV+ G+ EEA+ A
Sbjct: 164 ERHKLYVSNLPWKARAPNVKEFFAKFNPL-SANVIFD--NGKAAGYCFVSFGTKEEAEAA 220
Query: 171 IRLFDGSQIGGRTVKVNFPE 190
+ DG ++ GR V++ + E
Sbjct: 221 LTELDGKELMGRPVRLYWRE 240
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y NL W + + F Q G + + + GR+RGF FVT T E+ +A +
Sbjct: 76 KLYVANLPWSFPAPEIEKLF-AQHGTVKDVEVIKGKDGRNRGFAFVTMSTTEEAAAAAEK 134
Query: 277 MNGVEVEGRPLRLNMANE-RAPPVLP 301
+N +V GR +++ + R P LP
Sbjct: 135 LNSHDVMGRTIKVEFSRSFRKPAPLP 160
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A ++VG L +S+ L F G V A ++Y+R TDRSRG+G+V S A+ A
Sbjct: 176 ETATIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERA 235
Query: 171 IRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGN 222
++ G QI GR + + P GG+RA + F D P + ++ GN
Sbjct: 236 VKEMHGKQIDGREINCDMSTSKPAGGNGGDRA----------KKFGDVPSQPSDTLFLGN 285
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + + + F ++S ++ T + +GFG+V + D QSALDA+ G +
Sbjct: 286 LSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQGEYI 345
Query: 283 EGRPLRLNMA 292
+ RP+RL+ +
Sbjct: 346 DNRPVRLDFS 355
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
+++ +EE A ++ + + A +A L++GNL +++ L F+E G ++ IV D
Sbjct: 227 KRKADEEPAAAAKKSKTEDAPEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTD 286
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-------PEVPRGGERAAM 200
R + RSRGFG+V S +A +A+ G+ + GRT+ +++ P+ R +RA
Sbjct: 287 RESGRSRGFGYVEYTSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANPQQDRTQDRA-- 344
Query: 201 GPKLQNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
SY G SP ++ GNL + T L + F +L ++ E+ TGR +G
Sbjct: 345 -----RSY-GDQTSPESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKG 398
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
FG+V F + ++ ++A A+NG E+EGR +RL+ + R
Sbjct: 399 FGYVQFSSIDEAKAAHGALNGHELEGRAVRLDFSTPR 435
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 7/201 (3%)
Query: 100 EEEEPKVAA---SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
EE++P+ AA S E+ ++VG L +++ L + F E GTV +A ++ D + RS+GF
Sbjct: 190 EEQKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGF 249
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP- 215
G+V S E AK A+ + +I GR V ++ PR + + + S G SP
Sbjct: 250 GYVDFDSPEAAKAAVAVNGQKEIDGRMVNLDI-STPRPAQNNNGFAQQRASNFGDKQSPP 308
Query: 216 -HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++ GNL + T +R+AF + S ++ + +GR +GFG+VTF++ + + +
Sbjct: 309 SDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCV 368
Query: 275 DAMNGVEVEGRPLRLNMANER 295
+ MNG + GRP RL+ + R
Sbjct: 369 E-MNGHFIAGRPCRLDFSTPR 388
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ + L+VGNL + + + L F E SA +V DR + RSRGFG+V + ++A+
Sbjct: 163 ADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQ 222
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWG 226
+A G + GR ++++F G + A + + G SP ++ GN+ +
Sbjct: 223 KAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAAD-RAAKHGDTISPESDTLFVGNMPFT 281
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ D F + S ++ ++ +GR +GF +VTF + ED ++A D +NG +++GRP
Sbjct: 282 ADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRP 341
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 342 VRLDYAKPR 350
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ GNLGWG+ L F+ G SA+V+ +R +GRSRGFG+V FE + Q
Sbjct: 163 ADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQ 222
Query: 272 SALDAMNGVEVEGRPLRLNMANERA 296
A DA +G +EGR +RL+ A++ A
Sbjct: 223 KAYDAKSGGLLEGREMRLDFASKDA 247
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 103 EPKVAASDEAAR-----------LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
+P+ A+D AA+ L+VGN+P++ S++++ F +VAS I D+ +
Sbjct: 250 KPQAKAADRAAKHGDTISPESDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESG 309
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
R +GF +VT S+E+AK A +GS + GR V++++ + PR
Sbjct: 310 RPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRPVRLDYAK-PR 350
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EEP AS A L+VGNL +++ + L F E G ++ I+ +R T RSRGFG+V
Sbjct: 272 EEPAAGAS---ANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEY 328
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPE-VPRGGERAAMGPKLQNSYQGFVD--SPHK- 217
+ +A +A ++I GR + +++ P E+ + Q + F D SP
Sbjct: 329 TNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESD 388
Query: 218 -IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ GN+ + L + F + +L ++ + +GR +GFG+V F + E+ + A +
Sbjct: 389 TLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNE 448
Query: 277 MNGVEVEGRPLRLNMANERA 296
+NG E++GRP+RL+ + RA
Sbjct: 449 LNGAEIDGRPVRLDFSTPRA 468
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ R YVGNL + SL ++ GTV AE V + RS+G+G V + + A A
Sbjct: 107 DGCRCYVGNLAWETNEESLIAHCSQVGTVVQAE-VAKQPGGRSKGWGLVDFETPDAANSA 165
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I S + GR++ V GG + GP N+ + S +I NL W TS+
Sbjct: 166 INTLHNSDLQGRSIIVRLERA--GGANKSGGP---NAGRPEASSGLQIVVRNLPWSTTSE 220
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR FQ ++ A+ + TGRS+G+G V FET E Q+A+ NGVE+E RP+++
Sbjct: 221 DLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIK 280
Query: 291 M 291
+
Sbjct: 281 L 281
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 26/194 (13%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGN+P+S T L +F+ GT+ +I R RSRG+G V +V EA+ AI+
Sbjct: 8 RLYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGR-QGRSRGYGIVEYSNVNEAQVAIQT 66
Query: 174 FDGSQIGGRTVKVNFPEVP-------RGGERAAMGPKLQNSYQGFVDSP----HKIYAGN 222
DG +G R + V + P GG R+ +G D+P + Y GN
Sbjct: 67 LDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIG-----------DTPAADGCRCYVGN 115
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L W + L A Q G + + ++ GRS+G+G V FET + SA++ ++ ++
Sbjct: 116 LAWETNEESL-IAHCSQVGTVVQAEVAKQPGGRSKGWGLVDFETPDAANSAINTLHNSDL 174
Query: 283 EGRPLRLNMANERA 296
+GR + + + ERA
Sbjct: 175 QGRSIIVRL--ERA 186
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+++Y GN+ W T LR F G G ++ I GRSRG+G V + + Q A+
Sbjct: 7 NRLYVGNIPWSTTVDELRGIFSG-CGTITLVDIPTGRQGRSRGYGIVEYSNVNEAQVAIQ 65
Query: 276 AMNGVEVEGRPLRLNMANERAP 297
++G + R + + ++AP
Sbjct: 66 TLDGHTLGDR--NITVREDKAP 85
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ + L+VGNL + + + L F E SA +V DR + RSRGFG+V + ++A+
Sbjct: 163 ADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQ 222
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWG 226
+A G + GR ++++F G + A + + G SP ++ GN+ +
Sbjct: 223 KAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAAD-RAAKHGDTISPESDTLFVGNMPFT 281
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ D F + S ++ ++ +GR +GF +VTF + ED ++A D +NG +++GRP
Sbjct: 282 ADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRP 341
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 342 VRLDYAKPR 350
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ GNLGWG+ L F+ G SA+V+ +R +GRSRGFG+V FE + Q
Sbjct: 163 ADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQ 222
Query: 272 SALDAMNGVEVEGRPLRLNMANERA 296
A DA +G +EGR +RL+ A++ A
Sbjct: 223 KAYDAKSGGLLEGREMRLDFASKDA 247
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 103 EPKVAASDEAAR-----------LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
+P+ A+D AA+ L+VGN+P++ S++++ F +VAS I D+ +
Sbjct: 250 KPQAKAADRAAKHGDTISPESDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESG 309
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
R +GF +VT S+E+AK A +GS + GR V++++ + PR
Sbjct: 310 RPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRPVRLDYAK-PR 350
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 5/177 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++ V LP+S S+L + F E G + + ++ +R +SRGFGFVT S A+
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK 64
Query: 174 FDGSQIGGRTVKV-NFPEVPRGGERAAMG-PKL-QNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+G++ GRT+KV E P+ ++ P+ Q + + F+D+ +KI +L W +
Sbjct: 65 -NGAEFDGRTIKVEKATERPKRDQKENKDRPQHEQAAPKEFIDT-NKIIITSLAWSVNDD 122
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
LR AF L V+ +R +G+SRG G V F T E ++ A++ MNG E+EGR +
Sbjct: 123 SLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGRAI 179
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 70 ASFDGFQV-TEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSS 128
A FDG + E + + P+ +Q+E ++ E+ PK + ++ + +L +S+ S
Sbjct: 67 AEFDGRTIKVEKATERPKRDQKENKDRPQ-HEQAAPKEFI--DTNKIIITSLAWSVNDDS 123
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
L + F++ G + ++ DR + +SRG G V + E K+AI +G+++ GR + V
Sbjct: 124 LRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGRAIAV 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S +K+ L + L D FQ + ++V+ R +SRGFGFVTF + +A
Sbjct: 2 SENKVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNA 61
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
L+ NG E +GR +++ A ER
Sbjct: 62 LEK-NGAEFDGRTIKVEKATER 82
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 102 EEPKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
+ P DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V
Sbjct: 166 DSPPPLTEDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYV 225
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
+ + + A++L G ++ G V V E + R P ++ + H++Y
Sbjct: 226 EFKNEDSVQAALQL-TGQKLLGIPVIVQLTEAEK--NRQVRNPDATGNHPNSIPF-HRLY 281
Query: 220 AGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
GN+ + +T Q L++ F+ P G L + + TGRSRG+GFV F A + AL+ MN
Sbjct: 282 VGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDTGRSRGYGFVQFRDATQAREALEKMN 339
Query: 279 GVEVEGRPLRLNMANERAPP 298
G ++ GRP+R+ + N++ P
Sbjct: 340 GFDLAGRPIRVGLGNDKFTP 359
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EEP AS A L+VGNL +++ + L F E G ++ I+ +R T RSRGFG+V
Sbjct: 187 EEPAAGAS---ANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEY 243
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPE-VPRGGERAAMGPKLQNSYQGFVD--SPHK- 217
+ +A +A ++I GR + +++ P E+ + Q + F D SP
Sbjct: 244 TNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESD 303
Query: 218 -IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ GN+ + L + F + +L ++ + +GR +GFG+V F + E+ + A +
Sbjct: 304 TLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNE 363
Query: 277 MNGVEVEGRPLRLNMANERA 296
+NG E++GRP+RL+ + RA
Sbjct: 364 LNGAEIDGRPVRLDFSTPRA 383
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S+++A L+VGNL + + ++L E F + SA +V D+ T RSRGFG+V S E A+
Sbjct: 217 SEKSATLWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQ 276
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWG 226
+A G+ + GR ++++F P + G V SP ++ GNL +
Sbjct: 277 KAYDEKSGAFLQGRDLRLDFASKPSADSAPNARAADRAKKHGDVISPPSDTLFVGNLPFS 336
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + F + S ++ ++ +GR +GF +VTF + +D + +A+NG +++GRP
Sbjct: 337 ADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEALNGGDLDGRP 396
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 397 VRLDYAKPR 405
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNLGWG+ L + FQ G++SA+V+ ++ TGRSRGFG+V F++AE Q A D
Sbjct: 223 LWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQKAYDEK 282
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAK 304
+G ++GR LRL+ A++ + P A+
Sbjct: 283 SGAFLQGRDLRLDFASKPSADSAPNAR 309
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 15/192 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A +E L++G+L Y S L FA G V S +I+ +++T + G+GFV S
Sbjct: 14 ATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAA 73
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A+ ++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L
Sbjct: 74 AERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLA 121
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNGV
Sbjct: 122 PDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCS 181
Query: 284 GRPLRLNMANER 295
RP+R++MA +
Sbjct: 182 TRPMRISMATPK 193
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 42/206 (20%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV E A+
Sbjct: 115 IFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTE 174
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ-------GFVDSP----------- 215
+G R ++++ PK S+Q F +P
Sbjct: 175 MNGVFCSTRPMRISMAT-----------PKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSA 223
Query: 216 ------HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
I+ GNL T + LR F + S K+ RG GFV F T
Sbjct: 224 DGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIP------AGRGCGFVQFATRTS 277
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
+ A+ M G + +P+R++ ++
Sbjct: 278 AEEAIQRMQGHVIGQQPVRISWGKKQ 303
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 96 EAVEEEEEPKVAASD-EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
E EEE PK A +D E A ++VG L +S+ L + F G V +A ++Y+R TDRSR
Sbjct: 158 EDEEEESSPKKAKTDGEPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSR 217
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
G+G+V A++A++ G +I GR + V+ + + P+ ++ + F D
Sbjct: 218 GYGYVDFEDKSYAEKAVKEMHGKEIDGRPINVDM-----STSKPTVNPR-EDRQKRFGDI 271
Query: 215 PHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
P + ++ GNL + + + F ++S ++ T + +GFG+V + + +D
Sbjct: 272 PSEPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDA 331
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
+ AL+A+ G ++ RP+RL+ +
Sbjct: 332 KKALEALQGEYIDNRPVRLDYS 353
>gi|212722626|ref|NP_001131649.1| uncharacterized protein LOC100193009 [Zea mays]
gi|194692152|gb|ACF80160.1| unknown [Zea mays]
Length = 314
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP L E+F GTV S EI D + SRG VTM S+ EA+ AI
Sbjct: 131 LFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAIDAL 190
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG + GR V V + + + ++PHK+Y GNL W + Q LR+
Sbjct: 191 DGFDMDGREVFVKLASDVISNRKNVNLAHITPTKDHIFETPHKVYVGNLAWSVQPQDLRE 250
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
F ++S +++ +R GR+R +GF++F +A++L+ AL
Sbjct: 251 LFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEAL 290
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNL +S+ L E+F + GTV S ++ DR R+R +GF++ S +E +EA++L
Sbjct: 233 KVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEALKL 292
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
D + GR + V V R
Sbjct: 293 -DRTVFFGRDIVVKEAHVER 311
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P +++ NL Q L + F +LS ++ + +G SRG VT + + ++A+
Sbjct: 128 PRELFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAI 187
Query: 275 DAMNGVEVEGRPLRLNMANE 294
DA++G +++GR + + +A++
Sbjct: 188 DALDGFDMDGREVFVKLASD 207
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L + F +AG V A+IV DRV+ RS+G G+V
Sbjct: 158 EPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVSGRSKGVGYVEF 217
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
+ E AI++ G ++ G + E + R A P+ S+ V P H++Y
Sbjct: 218 KNEESVPLAIQM-TGQKLLGIPIIAQLTEAEKN--RQARNPEASTSHHNSV--PFHRLYV 272
Query: 221 GNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GN+ + +T Q L++ F+ P G L + + TGRSRG+GFV F + AL+ MNG
Sbjct: 273 GNIHFSITEQDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNG 330
Query: 280 VEVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 331 FDLAGRPIRVGLGNDKFTP 349
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
EEPK S EA ++V L +T+ L F + GTV A IV DR++ RS+G G+
Sbjct: 93 EEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGY 151
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG-----PKLQNSYQGFVD 213
V + ++E +AI L G+ + G +KV E R A G P + ++
Sbjct: 152 VELKTIELVDQAINL-SGTVVMGLPIKVQHTEAERNRTHAGDGSLNLPPGVSGTH----- 205
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
P ++Y G+L + LT ++ F+ L + + TGRS+G+ F+ ++ AED + A
Sbjct: 206 GPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKMA 265
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
L+ M G E+ GR LR+N +E+
Sbjct: 266 LEQMEGFELAGRTLRVNTVHEK 287
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L FA G V S +I+ +++T + G+GFV S A+
Sbjct: 38 EEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 97
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L +
Sbjct: 98 ILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLAPDV 145
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ Q P + AKV+ + TGR++G+GFV F + A+ MNGV RP
Sbjct: 146 TDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRP 205
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 206 MRISAATPK 214
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL ++T L ++F++ G E+VY ++ RG GFV G+ A+EAI+
Sbjct: 255 IFVGNLDPNVTEEELKQIFSQFG-----ELVYVKIP-AGRGCGFVQFGTRTSAEEAIQRM 308
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG V++++ P
Sbjct: 309 QGTVIGQLVVRISWGRSP 326
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V+ ++ G+L + + L F ++S K+I + TG+ G+GFV F + +
Sbjct: 37 VEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAE 96
Query: 272 SALDAMNGVEVEG--RPLRLNMAN----ERAPPVLP 301
L A NG ++ G + RLN A+ ER P P
Sbjct: 97 RILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A+ +V A++V D T R++G+GFV E A+
Sbjct: 136 IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSYQGFVDSP-------------HKI 218
+G R ++++ P+ G ++ +P I
Sbjct: 196 MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ RG GFV F T + A+ M
Sbjct: 256 FVGNLDPNVTEEELKQIFSQFGELVYVKI------PAGRGCGFVQFGTRTSAEEAIQRMQ 309
Query: 279 GVEVEGRPLRLNMANERAP 297
G + +R++ R+P
Sbjct: 310 GTVIGQLVVRISWG--RSP 326
>gi|357485175|ref|XP_003612875.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355514210|gb|AES95833.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 324
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NLP+S++ + ++F + GTV EI+ + + +G+ FVTM S E A+ A+ F
Sbjct: 98 LIVFNLPWSLSKPDIKDLFGQCGTVIDVEIIKSK-DGKGKGYTFVTMDSGEGAQAAVDKF 156
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ ++I GR ++V F + P+ ++ + IYA NL W S LRD
Sbjct: 157 NATEISGRILRVEFA-------KGFKKPRPPPPAPTPKEARYVIYASNLAWKARSTHLRD 209
Query: 235 AF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA- 292
F + +SA+V+F+ G+S G+GFV++ T E+ ++A+ A+ G E+ GRPL + ++
Sbjct: 210 IFTENFKTPVSARVVFQVPGGKSAGYGFVSYHTEEEAEAAISALQGKELLGRPLLVKISE 269
Query: 293 -----------NERAPPVLPAAKETKTENSID 313
E+ V P A + E +D
Sbjct: 270 RKVKEAGSEEVEEKVDDVQPEAGSEEVEEKVD 301
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 8/212 (3%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
+++ E+EEE V ++ KV S+E L++GNL +++ L F E G +A IV D
Sbjct: 235 KRKAEDEEEEVSAPKKTKVD-SNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTD 293
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
R + RSRGFG+V + +A +A +++ GR + V+F G AA + Q+
Sbjct: 294 RDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFAN---GRSNAAPKERAQSR 350
Query: 208 YQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Q F D SP ++ GN+ + + +AF +L ++ + +GR +GFG+V
Sbjct: 351 AQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQ 410
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F + ++ +SA A+NG ++ GR +RL+ ++ R
Sbjct: 411 FSSVDEARSAFQALNGADLGGRSMRLDFSSPR 442
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRSRGFG+V F A D A A
Sbjct: 261 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 320
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 321 KDAELDGRKLNVDFANGRS 339
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
++E E EE P++ + R ++V L + + L E F + G V A+IV DR+
Sbjct: 155 DDERRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRI 214
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
+ RS+G G+V + E +A++L G ++ G V V E + R A P+ +
Sbjct: 215 SQRSKGVGYVEFKNEESVTQALQLT-GQKLLGIPVIVQVTEAEK--NRQARNPEASGPHP 271
Query: 210 GFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETA 267
+ P H++Y GN+ + +T Q L+ F+ P G L + + GRSRG+GFV F A
Sbjct: 272 NSI--PFHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDA 327
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 328 GQAREALEKMNGFDLAGRPIRVGLGNDKFTP 358
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 78 TEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAAR------LYVGNLPYSMTSSSLAE 131
TE +P +E E+ A +E A++ + R LYVGNL S+ L +
Sbjct: 42 TEPESADPVSEAPAAGEQSAENQESSVVPASATQGGRETSDRVLYVGNLDKSINEDLLKQ 101
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
F G + +I+ D+ + + + F+ +A A++ +G QI G+TV++N+
Sbjct: 102 YFQVGGQITDVKIMVDK-KNNNVNYAFIEYLKSHDANVALQTLNGIQIEGKTVRINW--- 157
Query: 192 PRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
A + NS D ++ G+L + + L AF P + A V+++
Sbjct: 158 ------AFQSQQTTNS-----DDTFNLFVGDLNVDVDDETLSHAFDQFPSYVQAHVMWDM 206
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
TGRSRG+GFV+F E Q A++ M G+ + GR +R+N A +R
Sbjct: 207 QTGRSRGYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATKR 250
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L FA G V S +I+ +++T + G+GFV S A+
Sbjct: 38 EEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 97
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L +
Sbjct: 98 ILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLAPDV 145
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ Q P + AKV+ + TGR++G+GFV F + A+ MNGV RP
Sbjct: 146 TDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRP 205
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 206 MRISAATPK 214
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL ++T L ++F++ G E+VY ++ RG GFV G+ A+EAI+
Sbjct: 255 IFVGNLDPNVTEEELKQIFSQFG-----ELVYVKIP-AGRGCGFVQFGTRTSAEEAIQRM 308
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG V++++ P
Sbjct: 309 QGTVIGQLVVRISWGRSP 326
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V+ ++ G+L + + L F ++S K+I + TG+ G+GFV F + +
Sbjct: 37 VEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAE 96
Query: 272 SALDAMNGVEVEG--RPLRLNMAN----ERAPPVLP 301
L A NG ++ G + RLN A+ ER P P
Sbjct: 97 RILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A+ +V A++V D T R++G+GFV E A+
Sbjct: 136 IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSYQGFVDSP-------------HKI 218
+G R ++++ P+ G ++ +P I
Sbjct: 196 MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ RG GFV F T + A+ M
Sbjct: 256 FVGNLDPNVTEEELKQIFSQFGELVYVKI------PAGRGCGFVQFGTRTSAEEAIQRMQ 309
Query: 279 GVEVEGRPLRLNMANERAP 297
G + +R++ R+P
Sbjct: 310 GTVIGQLVVRISWG--RSP 326
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L FA G V S +I+ +++T + G+GFV S A+
Sbjct: 38 EEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 97
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L +
Sbjct: 98 ILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLAPDV 145
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ Q P + AKV+ + TGR++G+GFV F + A+ MNGV RP
Sbjct: 146 TDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRP 205
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 206 MRISAATPK 214
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL ++T L ++F++ G E+VY ++ RG GFV G+ A+EAI+
Sbjct: 255 IFVGNLDPNVTEEELKQIFSQFG-----ELVYVKIP-AGRGCGFVQFGTRTSAEEAIQRM 308
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG V++++ P
Sbjct: 309 QGTVIGQLVVRISWGRSP 326
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
V+ ++ G+L + + L F ++S K+I + TG+ G+GFV F + +
Sbjct: 37 VEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAE 96
Query: 272 SALDAMNGVEVEG--RPLRLNMAN----ERAPPVLP 301
L A NG ++ G + RLN A+ ER P P
Sbjct: 97 RILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A+ +V A++V D T R++G+GFV E A+
Sbjct: 136 IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSYQGFVDSP-------------HKI 218
+G R ++++ P+ G ++ +P I
Sbjct: 196 MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ RG GFV F T + A+ M
Sbjct: 256 FVGNLDPNVTEEELKQIFSQFGELVYVKI------PAGRGCGFVQFGTRTSAEEAIQRMQ 309
Query: 279 GVEVEGRPLRLNMANERAP 297
G + +R++ R+P
Sbjct: 310 GTVIGQLVVRISWG--RSP 326
>gi|326503644|dbj|BAJ86328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 14/183 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIR 172
+L+VGN+P++ +++ ++FAE G V E++ ++ D R RGF FVTM + EEA +
Sbjct: 80 KLFVGNMPFTFSAAETEKLFAECGVVKDVEVI--KMKDGRKRGFAFVTMATAEEAAAVVE 137
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
FDG I GR +KV F + R P +S V + +K+Y NL W S L
Sbjct: 138 KFDGHDINGRVIKVEFSKSFR-------KPAPPSSPDTIV-AKYKLYVSNLAWKARSADL 189
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F Q +SA ++F+ +S G+GFV+F T E+ ++AL +NG E+ RP+ L
Sbjct: 190 KEFFS-QFNPVSANIVFD--DRKSAGYGFVSFGTKEEAEAALSELNGKELMERPVILRWR 246
Query: 293 NER 295
++
Sbjct: 247 EDK 249
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 18/193 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A +DE L++G+L Y M + +A FA G VAS +I+ ++ T + G+GF+ M S
Sbjct: 44 ATADEVRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGA 103
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-KIYAGNL 223
A+ ++ ++G+ + G + ++N+ G +R DSP I+ G+L
Sbjct: 104 AERILQTYNGTPMPNGEQNFRLNWASFSGGDKRD--------------DSPDFTIFVGDL 149
Query: 224 GWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L++ F+ P + AKV+ +R TGR++G+GFV F + A+ MNG
Sbjct: 150 AADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFC 209
Query: 283 EGRPLRLNMANER 295
RP+R+ +A+ +
Sbjct: 210 STRPMRVGLASNK 222
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 24/197 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T R++G+GFV G E A+
Sbjct: 144 IFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 203
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMG---PK--LQNSYQGFVDSPHK--IYAGNLGWG 226
+G+ R ++V ++A +G PK QN P+ I+ GNL
Sbjct: 204 MNGAFCSTRPMRVGLAS----NKKAVVGQQYPKASYQNPQPQNDGDPNNTTIFVGNLDSN 259
Query: 227 LTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ L++ F GQ G LL K+ + GFV F + AL +NG ++ G+
Sbjct: 260 VMDDHLKELF-GQYGQLLHVKIP------AGKRCGFVQFADRSSAEEALKMLNGAQLSGQ 312
Query: 286 PLRL----NMANERAPP 298
+RL N +N++A P
Sbjct: 313 NIRLSWGRNPSNKQAQP 329
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
++ +A + +P+ ++VGNL ++ L E+F + G + +I +
Sbjct: 228 QQYPKASYQNPQPQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRC- 286
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
GFV A+EA+++ +G+Q+ G+ +++++ P
Sbjct: 287 -----GFVQFADRSSAEEALKMLNGAQLSGQNIRLSWGRNP 322
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---DSPHK 217
M SVEEA+ A + F+G ++ GR ++VN P E A + DS ++
Sbjct: 1 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENR 60
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ NL WG+ + L+ F+ Q +L A+ I++R +GRSRGFGFVTF + +++ SA+ ++
Sbjct: 61 VHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSAIQSL 120
Query: 278 NGVEVEGRPLRLNMANER 295
NGV++ GR +R+++A+ +
Sbjct: 121 NGVDLNGRAIRVSLADSK 138
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
SD R++V NL + + + +L +F E G V A +YDR + RSRGFGFVT S +E
Sbjct: 55 SDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVN 114
Query: 169 EAIRLFDGSQIGGRTVKVNFPE 190
AI+ +G + GR ++V+ +
Sbjct: 115 SAIQSLNGVDLNGRAIRVSLAD 136
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 8/208 (3%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E+EEE V ++ KV S+E L++GNL +++ L F E G +A IV DR +
Sbjct: 209 EDEEEEVTAPKKTKVD-SNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSG 267
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
RSRGFG+V + +A +A +++ GR + V+F G AA + Q+ Q F
Sbjct: 268 RSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFAN---GRSNAAPKERAQSRAQNF 324
Query: 212 VD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
D SP ++ GN+ + + +AF +L ++ + +GR +GFG+V F +
Sbjct: 325 GDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSV 384
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANER 295
++ +SA A+NG ++ GR +RL+ ++ R
Sbjct: 385 DEARSAFQALNGADLGGRSMRLDFSSPR 412
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRSRGFG+V F A D A A
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 290
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 291 KDAELDGRKLNVDFANGRS 309
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
+ ++E +A + ++ +YV NL ++T L +F++ GTV+S ++ D + RSRGFG
Sbjct: 187 INKDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGM-GRSRGFG 245
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH- 216
FV + E AK+A+ G Q+G + + V + + R + K ++ F+ P+
Sbjct: 246 FVNFCNPENAKKAMESLCGLQLGSKKLFVG-KALKKDERREMLKQKFSDN---FIAKPNM 301
Query: 217 ---KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
+Y NL + LR+ F ++SAKV+ GRS+GFGFV F E+ + A
Sbjct: 302 RWSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHE-NGRSKGFGFVCFSNCEESKQA 360
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
+NG V+G+P+ + +A +
Sbjct: 361 KRYLNGFLVDGKPIVVRVAERK 382
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYV NL S+TSS L +F G++ S ++V + +S+GFGFV + + A A
Sbjct: 112 ANLYVKNLDSSITSSCLERMFCPFGSILSCKVVEE--NGQSKGFGFVQFDTEQSAVSARS 169
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
GS + G+ K+ + ERAAM G DS + +Y NL +T L
Sbjct: 170 ALHGSMVYGK--KLFVAKFINKDERAAMA--------GNQDSTN-VYVKNLIETVTDDCL 218
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F Q G +S+ V+ GRSRGFGFV F E+ + A++++ G+++ + L
Sbjct: 219 HTLF-SQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKL 272
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T L + F+ V S + + VT +S + ++ S A A+
Sbjct: 23 LYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRL 82
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ S + G+ +++ + + R + GF + +Y NL +TS L
Sbjct: 83 NHSDLKGKAMRIMWSQRDLAYRR--------RTRTGFAN----LYVKNLDSSITSSCLER 130
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS KV+ E G+S+GFGFV F+T + SA A++G V G+ L
Sbjct: 131 MFCPFGSILSCKVVEE--NGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKL 181
>gi|326496905|dbj|BAJ98479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 14/183 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIR 172
+L+VGN+P++ +++ ++FAE G V E++ ++ D R RGF FVTM + EEA +
Sbjct: 61 KLFVGNMPFTFSAAETEKLFAECGVVKDVEVI--KMKDGRKRGFAFVTMATAEEAAAVVE 118
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
FDG I GR +KV F + R P +S V + +K+Y NL W S L
Sbjct: 119 KFDGHDINGRVIKVEFSKSFR-------KPAPPSSPDTIV-AKYKLYVSNLAWKARSADL 170
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F Q +SA ++F+ +S G+GFV+F T E+ ++AL +NG E+ RP+ L
Sbjct: 171 KEFFS-QFNPVSANIVFDDR--KSAGYGFVSFGTKEEAEAALSELNGKELMERPVILRWR 227
Query: 293 NER 295
++
Sbjct: 228 EDK 230
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL S+ L + F G + + +++ D+ + + FV +A A++
Sbjct: 79 LYVGNLDKSINEDILKQYFQVGGPITNVKVINDK--NNEANYAFVEYSQHHDASIALKTL 136
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G QI T+K+N+ Q+ D ++ G+L + + L
Sbjct: 137 NGKQIENNTLKINW--------------AFQSQQNTTSDETFNLFIGDLNVDVDDETLVA 182
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF+ + A V+++ TGRSRG+GFV+F +D Q A+D M G E+ GR LR+N A++
Sbjct: 183 AFKDFKSFIQAHVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASK 242
Query: 295 R 295
R
Sbjct: 243 R 243
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
EE +EE + ++ A ++E A L+VG L +++ S L F G V SA ++ +R
Sbjct: 173 EESKEEVSTPVKKSKPAAVNEEPATLFVGRLSWNIDDSWLKREFEHIGGVISARVIMERA 232
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQ 205
T +SRG+G+V + A++A+ G +I GR + ++ P R A +
Sbjct: 233 TGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAK--QYG 290
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
+S D+ ++ GNL + L F ++S +V T + +GFG+V F
Sbjct: 291 DSQSALSDT---LFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFS 347
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ ++ ++AL+A+NG +EGRP RL+ + R
Sbjct: 348 SVDEAKAALEALNGEYIEGRPCRLDFSTPR 377
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 8/216 (3%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
P +++ E+E EA ++ + + A D ++ L+VGNL +++ L F E G ++ A
Sbjct: 237 PSKKRKAEDEPEASTKKSKTEETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGAR 296
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D+ T RS+GFG+V +A A+ G+ I GR V+F PR + A +
Sbjct: 297 VISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDF-STPR--DTTAPRER 353
Query: 204 LQNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
N F D+ + ++ GNL + + +AF +++ ++ ++ TG +GF
Sbjct: 354 ANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGF 413
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+VTF + ED +A DAM G ++ GRP+RL+ A R
Sbjct: 414 GYVTFGSVEDATAAYDAMMGADIAGRPVRLDYATPR 449
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G V S +I+ ++VT G+GF+ S E A++
Sbjct: 12 EEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEK 71
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R G S H I+ G+L +
Sbjct: 72 ILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPG------------SDHSIFVGDLAPDV 119
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 120 TDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRP 179
Query: 287 LRLNMA 292
+R++ A
Sbjct: 180 MRISAA 185
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL ++T L ++ + G E++Y ++ +G GFV S A+EA++
Sbjct: 228 IFIGNLDPNVTEDELRQICVQFG-----ELIYVKIP-VGKGCGFVQYASRASAEEAVQRL 281
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG + V++++ P
Sbjct: 282 HGTMIGQQAVRLSWGRSP 299
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+++ E EE P++ + R ++V L + + L E F G V A+IV DR+
Sbjct: 155 DDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRI 214
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
+ RS+G G+V + E +A++L G ++ G V V E + R A P+ +
Sbjct: 215 SQRSKGVGYVEFKNEESVTQALQLT-GQKLLGIPVIVQVTEAEK--NRQARNPEASGPHP 271
Query: 210 GFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETA 267
+ P H++Y GN+ + +T Q L+ F +P G L + + GRSRG+GFV F A
Sbjct: 272 NSI--PFHRLYVGNIHFNVTEQDLQAVF--EPFGELEFVQLQKDENGRSRGYGFVQFRDA 327
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 328 GQAREALEKMNGFDLAGRPIRVGLGNDKFTP 358
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 125/234 (53%), Gaps = 23/234 (9%)
Query: 78 TEDSQDEPETE--QEEEEEEEAVEEEEEPKVAASDEAA----RLYVGNLPYSMTSSSLAE 131
TE S +PET Q + + + E+ K A +D+A+ L+VG L +++ L +
Sbjct: 360 TEMSDPKPETPVAQNGKNKRKGDTEDGSAKKAKTDDASGDIKNLFVGGLSWNVDDDWLKK 419
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF--- 188
F + G V SA ++ +R T+RS+GFG+V S E+A++A+ G++I GRT+ V+F
Sbjct: 420 EFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINVDFSAP 479
Query: 189 -PEVPRGGERAAMGPKLQNSY-QGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSA 245
PE P P+ + S+ Q + +P ++ GNL + T + +AF + S
Sbjct: 480 KPERP---------PQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSV 530
Query: 246 KVIFERYTGRSRGFGFVTFETAEDLQSALDA--MNGVEVEGRPLRLNMANERAP 297
++ + T R +GFG+V F T E +A++ +G+ ++ R RL+ + RAP
Sbjct: 531 RLPTDPETERIKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQARLDYSQPRAP 584
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 16/214 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A++DE L++G+L Y M + L FA G V+S +++ ++ T +S G+GF+ S
Sbjct: 61 ASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAG 120
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNL 223
A+ ++ ++G+ + GG++ ++N+ GER+ DSP + I+ G+L
Sbjct: 121 AERILQTYNGAIMPNGGQSFRLNWATF-SAGERSRQD-----------DSPDYTIFVGDL 168
Query: 224 GWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L++ F+ + + AKV+ +R TGR++G+GFV F + A+ M GV
Sbjct: 169 AADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMTEMQGVLC 228
Query: 283 EGRPLRLNMANERAPPVLPAAKETKTENSIDGSE 316
RP+R+ A+ + P K + + GS+
Sbjct: 229 STRPMRIGPASNKTPATQSQPKASYLNSQPQGSQ 262
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T R++G+GFV E A+
Sbjct: 163 IFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMTE 222
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-----QGFVD--SPHK--IYAGNLG 224
G R +++ P + A + + SY QG + P+ I+ GNL
Sbjct: 223 MQGVLCSTRPMRIG----PASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVGNLD 278
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LR F L+ K+ + GFV F + AL +NG + G
Sbjct: 279 PNVTDDHLRQVFSQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTLLGG 332
Query: 285 RPLRLNMANERAP 297
+ +RL+ R+P
Sbjct: 333 QNVRLSWG--RSP 343
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+++ E EE P++ + R ++V L + + L E F G V A+IV DR+
Sbjct: 155 DDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRI 214
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
+ RS+G G+V + E +A++L G ++ G V V E + R A P+ +
Sbjct: 215 SQRSKGVGYVEFKNEESVTQALQLT-GQKLLGIPVIVQVTEAEK--NRQARNPEASGPHP 271
Query: 210 GFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETA 267
+ P H++Y GN+ + +T Q L+ F +P G L + + GRSRG+GFV F A
Sbjct: 272 NSI--PFHRLYVGNIHFNVTEQDLQAVF--EPFGELEFVQLQKDENGRSRGYGFVQFRDA 327
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 328 GQAREALEKMNGFDLAGRPIRVGLGNDKFTP 358
>gi|217072826|gb|ACJ84773.1| unknown [Medicago truncatula]
Length = 232
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 10/135 (7%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
E E ++ E E A+L+VGN P+ + S LA +F +AGTV AE++Y+R TD
Sbjct: 89 ETETGADDSAEGYFVEPPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDL 148
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG--ERAAMGPKLQNSYQG 210
SRGFGFVTM +VEEA+ A+ F+G GR++ VN P+G ER P+ +++
Sbjct: 149 SRGFGFVTMNTVEEAESAVEKFNGYDYNGRSLVVN-KASPKGSRPERTERAPR---TFEP 204
Query: 211 FVDSPHKIYAGNLGW 225
+ +IY NL W
Sbjct: 205 VL----RIYVANLAW 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
Query: 211 FVDSPH--KIYAGNLGWGLTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETA 267
FV+ P K++ GN + + S+ L F GQ G + A+VI+ R T SRGFGFVT T
Sbjct: 102 FVEPPEDAKLFVGNFPFDVDSEKLAMLF-GQAGTVEIAEVIYNRQTDLSRGFGFVTMNTV 160
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMAN---------ERAP----PVL 300
E+ +SA++ NG + GR L +N A+ ERAP PVL
Sbjct: 161 EEAESAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVL 206
>gi|388503916|gb|AFK40024.1| unknown [Medicago truncatula]
Length = 324
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NLP+S++ + ++F + GTV EI+ + + +G+ FVTM S E A+ A+ F
Sbjct: 98 LIVFNLPWSLSKPDIKDLFGQCGTVIDVEIIKSK-DGKGKGYTFVTMDSGEGAQAAVDKF 156
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ ++I GR ++V F + P+ ++ + IYA NL W S LRD
Sbjct: 157 NATEISGRILRVEFA-------KGFKKPRPPPPAPTPKEARYVIYASNLAWKARSTHLRD 209
Query: 235 AF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA- 292
F + +SA+V+F+ G+S G+GFV++ T E+ ++A+ A+ G E+ GRPL + ++
Sbjct: 210 IFTENFKTPVSARVVFQVPGGKSAGYGFVSYHTEEEAEAAIFALQGKELLGRPLLVKISE 269
Query: 293 -----------NERAPPVLPAAKETKTENSID 313
E+ V P A + E +D
Sbjct: 270 RKVKEAGSEEVEEKVDDVQPEAGSEEVEEKVD 301
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+T Q +EEEE + RL N+P++ T+ + +F + GTV E+
Sbjct: 76 DTPQNDEEEEFS--------------RTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELS 121
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
T R+RG F++MGS EEA A+ + ++ GR +KVN+ + K
Sbjct: 122 MHNKT-RNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKK--------KPS 172
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTF 264
+ Q +P+ ++ NL + ++ LR+ F G ++SA+VIF RS G+GFV+F
Sbjct: 173 SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSF 232
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRL 289
+ E+ +AL + G GRPLR+
Sbjct: 233 GSKEEADTALSSFQGQMFMGRPLRV 257
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ A N+ W T+Q +R F+ +L ++ T R+RG F++ + E+ +AL
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 277 MNGVEVEGRPLRLNMAN 293
+ E+EGR +++N AN
Sbjct: 149 LESYELEGRAIKVNYAN 165
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 94 EEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
++E E ++ K S+E A ++VG L +S+ L F G V SA ++Y++ TDRS
Sbjct: 142 DDEESSESKKQKPDESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRS 201
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF---PEVPRGGERAAMGPKLQNSYQG 210
RG+G+V + A++AI+ G +I GR + + GG+RA +
Sbjct: 202 RGYGYVDFKNKTFAEKAIKEMQGKEIDGRPINCDMSTSKPASNGGDRA----------KK 251
Query: 211 FVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
F D+P + ++ GNL + + + F ++S ++ T + +GFG+V +
Sbjct: 252 FGDTPSEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGD 311
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
E + ALDA+ G + RP+RL+ + R
Sbjct: 312 VESAKKALDALQGEYINNRPVRLDFSTPR 340
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+T Q +EEEE + RL N+P++ T+ + +F + GTV E+
Sbjct: 76 DTPQNDEEEEFS--------------RTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELS 121
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
T R+RG F++MGS EEA A+ + ++ GR +KVN+ + K
Sbjct: 122 MHNKT-RNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKK--------KPS 172
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTF 264
+ Q +P+ ++ NL + ++ LR+ F G ++SA+VIF RS G+GFV+F
Sbjct: 173 SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSF 232
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRL 289
+ E+ +AL + G GRPLR+
Sbjct: 233 GSKEEADTALSSFQGQMFMGRPLRV 257
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ A N+ W T+Q +R F+ +L ++ T R+RG F++ + E+ +AL
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 277 MNGVEVEGRPLRLNMAN 293
+ E+EGR +++N AN
Sbjct: 149 LESYELEGRAIKVNYAN 165
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 15/192 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A+ +E L++G+L Y + + L F+ G V S +I+ +++T + G+GF+ S
Sbjct: 9 ASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSA 68
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A+ ++ ++G+Q+ G +T ++N+ G R GP H I+ G+L
Sbjct: 69 AERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPD------------HSIFVGDLA 116
Query: 225 WGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F+ G + AKV+ + TGRS+G+GFV F + A+ MNGV
Sbjct: 117 PDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCS 176
Query: 284 GRPLRLNMANER 295
RP+R++ A +
Sbjct: 177 TRPMRISAATPK 188
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGNL +++ L + F + G + S ++ + GFV G+ A+EAI+
Sbjct: 236 IYVGNLDLNVSEEELKQNFLQFGEIVSVKV------HPGKACGFVQFGARASAEEAIQKM 289
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNS----YQGFVDSPHKIYA 220
G +G + ++V++ P+ R G ++ S Y G+ ++ YA
Sbjct: 290 QGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYA 341
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ + L+VGNL + + + L F + SA +V DR + RSRGFG+V + E+A+
Sbjct: 176 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 235
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGG---ERAAMGPKLQNSYQGFVDSPHK--IYAGNL 223
+A G+ + GR ++++F G ++AA + + G SP ++ GN+
Sbjct: 236 KAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAAN----RAAKHGDTISPESDTLFVGNM 291
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ + D F + S ++ ++ +GR +GF +VTF + ED ++A + +NG ++
Sbjct: 292 PFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLN 351
Query: 284 GRPLRLNMANER 295
GRP+RL+ A R
Sbjct: 352 GRPVRLDYAKPR 363
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ GNLGWG+ L F+ G SA+V+ +R +GRSRGFG+V F T E Q
Sbjct: 176 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 235
Query: 272 SALDAMNGVEVEGRPLRLNMANERA 296
A DA +G +EGR +RL+ A + A
Sbjct: 236 KAYDAKSGALLEGREMRLDFAAKDA 260
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A+++ +L+VG +P +T + F++ G V A ++ D++T R RGFGFVT + +E
Sbjct: 73 AAEDRRQLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEV 132
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN--SYQGFVDSPHKIYAGNLGW 225
+ I Q+ G+ V VN + P+ R G S +G D P K++ G L
Sbjct: 133 EVVIMKGGPHQLNGKRVDVNRSQDPKDPHRGGWGSDRSGGPSRRG-GDDPMKVFCGGLQS 191
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
L+S+ LR F ++ + +R TGRS+G+GFVTF++ + + +A++ N ++GR
Sbjct: 192 TLSSERLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTFDSEDAVAAAINGNN--MIDGR 249
Query: 286 PLR 288
+R
Sbjct: 250 WVR 252
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P D+ +++ G L +++S L + F++ G + + DR T RS+G+GFVT S
Sbjct: 173 PSRRGGDDPMKVFCGGLQSTLSSERLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTFDS 232
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVN 187
+ AI + I GR V+ +
Sbjct: 233 EDAVAAAIN--GNNMIDGRWVRTS 254
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+++ G + G+T G F + A V+ ++ TGR RGFGFVT+ T ++++ +
Sbjct: 79 QLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMK 138
Query: 277 MNGVEVEGRPLRLNMANERAPP 298
++ G+ + +N + + P
Sbjct: 139 GGPHQLNGKRVDVNRSQDPKDP 160
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A+
Sbjct: 166 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 225
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 226 KAIQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLS 277
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F ED + ALDA+ G ++
Sbjct: 278 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 337
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 338 RPVRLDFSSPR 348
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A+
Sbjct: 164 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 223
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 224 KAIQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLS 275
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F ED + ALDA+ G ++
Sbjct: 276 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 335
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 336 RPVRLDFSSPR 346
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A+
Sbjct: 164 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 223
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 224 KAIQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLS 275
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F ED + ALDA+ G ++
Sbjct: 276 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 335
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 336 RPVRLDFSSPR 346
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A+
Sbjct: 166 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 225
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 226 KAIQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLS 277
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F ED + ALDA+ G ++
Sbjct: 278 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 337
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 338 RPVRLDFSSPR 348
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A+
Sbjct: 168 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 227
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 228 KAIQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLS 279
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F ED + ALDA+ G ++
Sbjct: 280 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 339
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 340 RPVRLDFSSPR 350
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P DE R ++V L + + L E F +AG VA A+IV DRV++RS+G G+V
Sbjct: 164 PPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEF 223
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E A++L G ++ G V V E + Q + F H++Y G
Sbjct: 224 KTEESVAAALQL-TGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVG 278
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + +GRSRG+GFV F A + AL+ MNG
Sbjct: 279 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGF 336
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 337 DLAGRPIRVGLGNDKFTP 354
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
E E+ AV+ E S RLYVGN+ +S+T L VF G + ++ D +
Sbjct: 251 EAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDD-S 309
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF------PEVPRGGERAAMGPKL 204
RSRG+GFV +A+EA+ +G + GR ++V PE R GP
Sbjct: 310 GRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGPNG 369
Query: 205 QNSYQG 210
Q YQG
Sbjct: 370 QQQYQG 375
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 27/228 (11%)
Query: 79 EDSQDEPETEQEEEEEEEAVEE--EEEPKV--AASDEAAR------LYVGNLPYSMTSSS 128
E+ ++PE +E E + A +E +++P V A++ + R LYVGNL S+T
Sbjct: 14 EEVIEKPEEVSQEVEGDNASQENDDDKPSVVPASATKGGRETSDRVLYVGNLDKSITEDL 73
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L + F G + + +I+ D + + + FV +A A++ +G Q+ +T+K+N+
Sbjct: 74 LKQYFQAGGPIQNVKIIED-MKNEYVNYAFVEYIRSHDANVALQTLNGVQLENKTLKINW 132
Query: 189 P-EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKV 247
E + E D ++ G+L + + L F+ P + A V
Sbjct: 133 AFETQQAAEN---------------DDTFNLFVGDLNVDVDDETLAGTFREFPTFIQAHV 177
Query: 248 IFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+++ TGRSRG+GFV+F E+ Q A+DAM G ++ GR +R+N A +R
Sbjct: 178 MWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKR 225
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 8/216 (3%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
P +++ E+E EA ++ + + A D ++ L+VGNL +++ L F E G ++ A
Sbjct: 211 PSKKRKAEDEPEASTKKSKTEETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGAR 270
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D+ T RS+GFG+V +A A+ G+ I GR V+F PR + A +
Sbjct: 271 VISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDF-STPR--DTTAPRER 327
Query: 204 LQNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
N F D+ + ++ GNL + + +AF +++ ++ ++ TG +GF
Sbjct: 328 ANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGF 387
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+VTF + ED +A DAM G ++ GRP+RL+ A R
Sbjct: 388 GYVTFGSVEDATAAYDAMMGADIAGRPVRLDYATPR 423
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 25/198 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SLAE F+++ + A +V D+ T S+GFGFVT VE+A+ A++
Sbjct: 38 LFVRSLPTSATTESLAEYFSQSYIIKHAVVVCDKETKASKGFGFVTFADVEDAESALKEL 97
Query: 175 DGSQIGGRTVKVNFPE-------------VPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+GS+ G+ ++V++ E VP R + K + QG P K+
Sbjct: 98 NGSKFDGKVIRVDYAESRKREIDEKVGRSVPTAASRESKKQKEEERGQGL---PPKLIVR 154
Query: 222 NLGWGLTS-QGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDLQSALDAM 277
NL W + + L F+ KV F + G+ GFGF+T ++ + AL +
Sbjct: 155 NLPWSIKEPEDLNVLFRS-----FGKVKFATLPKRNGKLSGFGFITMRGRKNAERALQMI 209
Query: 278 NGVEVEGRPLRLNMANER 295
NG E++GR L ++ A E+
Sbjct: 210 NGKEIDGRQLAVDWAVEK 227
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 112 AARLYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
A +++ NLP++ T L + F G + A +V D T+R RG GFV ++A
Sbjct: 303 ATTIFIRNLPFTATDQVLYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPDDANTC 362
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
IR E PRG E AM P
Sbjct: 363 IR-----------------EAPRGAE--AMAP 375
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P DE R ++V L + + L E F +AG VA A+IV DRV++RS+G G+V
Sbjct: 164 PPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEF 223
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E A++L G ++ G V V E + Q + F H++Y G
Sbjct: 224 KTEESVAAALQL-TGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVG 278
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + +GRSRG+GFV F A + AL+ MNG
Sbjct: 279 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGF 336
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 337 DLAGRPIRVGLGNDKFTP 354
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
E E+ AV+ E S RLYVGN+ +S+T L VF G + ++ D +
Sbjct: 251 EAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDD-S 309
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF------PEVPRGGERAAMGPKL 204
RSRG+GFV +A+EA+ +G + GR ++V PE R GP
Sbjct: 310 GRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGPNG 369
Query: 205 QNSYQG 210
Q YQG
Sbjct: 370 QQQYQG 375
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 23/197 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SLAE F+++ + A +V D+ T S+GFGFVT VE+A+ A++ F
Sbjct: 38 LFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETKVSKGFGFVTFADVEDAESALKEF 97
Query: 175 DGSQIGGRTVKVNFPE-------------VPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+GS+ G+ ++V++ E VP R + K + QG P K+
Sbjct: 98 NGSKFDGKIIRVDYAESRKREIDEKIGRSVPTAASRESKKQKEEERGQGL---PPKLIVR 154
Query: 222 NLGWGLTS-QGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
NL W + + L F+ G+ V + G+ GFGFVT ++ + AL +N
Sbjct: 155 NLPWSVKEPEDLNVLFRSFGKVKF----VTLPKRNGKLSGFGFVTMRGRKNAEKALQMIN 210
Query: 279 GVEVEGRPLRLNMANER 295
G E++GR + ++ A E+
Sbjct: 211 GKEIDGRQIAVDWAVEK 227
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 112 AARLYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
A +++ NLP+S T +L + F G + A +V D T+R RG GFV E+A
Sbjct: 300 ATTIFIRNLPFSATDQALYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPEDANTC 359
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
IR E PRG E +M P
Sbjct: 360 IR-----------------EAPRGAE--SMAP 372
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L + + L + F +AG VA A+IV DRV++RS+G G+V S E A++L
Sbjct: 211 VFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEESVTAALQLT 270
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLR 233
G ++ G V V E + + + N V P H++Y GN+ + +T LR
Sbjct: 271 -GQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGV--PFHRLYVGNIHFSITESDLR 327
Query: 234 DAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ P G L + + TGRSRG+GFV F ++ + AL+ MNG ++ GRP+R+ +
Sbjct: 328 NVFE--PFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNGFDLAGRPIRVGLG 385
Query: 293 NERAPP 298
N++ P
Sbjct: 386 NDKFTP 391
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 8/214 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
++++ + E+EE V ++ KV + E L++GNL +++ L F E G +A IV
Sbjct: 221 KSQKRKAEDEEEVVAPKKTKVEPT-EGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIV 279
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
DR T RS+GFG+V + E+A +A +++ GR + V+F AA + Q
Sbjct: 280 TDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANA---RSNAAPRDRAQ 336
Query: 206 NSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ Q F D SP ++ GN+ + + + F +L ++ + +GR +GFG+
Sbjct: 337 SRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGY 396
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
V F + ++ +SA +++NG E+ GR +RL+ + R
Sbjct: 397 VQFSSIDEARSAFESLNGSELAGRAMRLDFSTPR 430
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R TGRS+GFG+V F AED A A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 309 KDTELDGRKLNVDFANARS 327
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K + + E A L+VG L +S+ L FA G V SA ++ +R TDRSRG+G+V +
Sbjct: 141 KKSKTQEPATLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDI 200
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQNSYQGFVDSPHK----IY 219
A++A++ G +I GR + V+ P GG K F D P + ++
Sbjct: 201 SYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKK-------FGDVPSEPSDTLF 253
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL + L + F ++S ++ T + +GFG+V + ED + ALDA+ G
Sbjct: 254 LGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQG 313
Query: 280 VEVEGRPLRLNMANER 295
+ RP+RL+ + R
Sbjct: 314 ESINDRPVRLDFSTPR 329
>gi|367000405|ref|XP_003684938.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
gi|357523235|emb|CCE62504.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
Length = 442
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 27/226 (11%)
Query: 79 EDSQDEPETEQEEEEEEEAVEEEEEPKVAA---------SDEAARLYVGNLPYSMTSSSL 129
E+ +DE + Q+++E E++ V A SD+ LYVGNL S+ +L
Sbjct: 38 ENQEDENQDRQKDQESVGTAAEDDSDVVPANAINGGRETSDKI--LYVGNLDKSINEETL 95
Query: 130 AEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP 189
+ F G +++ +++ D+ + S + FV +A A + +G I + +K+N+
Sbjct: 96 KQYFQIGGPISNVKVINDK--NNSVNYAFVEYLQHHDADVAFKNLNGKTIETKVLKINW- 152
Query: 190 EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF 249
Q+ +S ++ G+L + + L AF P + A V++
Sbjct: 153 -------------AFQSQQTTSDESLFNLFVGDLNVDVDDETLGHAFSEFPSFVQAHVMW 199
Query: 250 ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRSRG+GF++F ED Q+A+D M E+ GR +R+N A++R
Sbjct: 200 DMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQIRINWASKR 245
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
KV S E A ++VG L +S+ L F G V SA ++Y+R TDRSRG+G+V
Sbjct: 179 KVELSGEPATIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDK 238
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQNSYQGFVDSPHK----IY 219
A++A++ G +I GR + + P G R K F D P + ++
Sbjct: 239 SYAEKAVKEMHGKEIDGRPINCDLSTSKPAGNPRDDRAKK-------FGDLPSEPSETLF 291
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL + + + F ++S ++ T + +GFG+V + +D + ALDA+ G
Sbjct: 292 LGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDALQG 351
Query: 280 VEVEGRPLRLNMANER 295
++ RP+RL+ + R
Sbjct: 352 EYIDNRPVRLDYSTPR 367
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P DE R ++V L + + L E F +AG VA A+IV DRV++RS+G G+V
Sbjct: 164 PPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEF 223
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E A++L G ++ G V V E + Q + F H++Y G
Sbjct: 224 KTEESVAAALQL-TGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVG 278
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + +GRSRG+GFV F A + AL+ MNG
Sbjct: 279 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGF 336
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 337 DLAGRPIRVGLGNDKFTP 354
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
E E+ AV+ E S RLYVGN+ +S+T L VF G + ++ D +
Sbjct: 251 EAEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDD-S 309
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF------PEVPRGGERAAMGPKL 204
RSRG+GFV +A+EA+ +G + GR ++V PE R GP
Sbjct: 310 GRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGPNG 369
Query: 205 QNSYQG 210
Q YQG
Sbjct: 370 QQQYQG 375
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR------LYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
E+++EE EE++ + + R LYVGNLP S+ L + F G+++S +I
Sbjct: 69 EKQQEEGDEEDDSAAPVLATQGGREKSDKILYVGNLPKSIDDDLLKQYFQIGGSISSVKI 128
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+ D+ + + FV +A A + +G ++ G+ +K+N+ A +
Sbjct: 129 IPDKNSQECN-YAFVEYFEPHDANVAYQTLNGKEVEGKVLKINW----------AFQSQQ 177
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
NS + F ++ G+L + L F+ P + A V+++ +GRSRG+GFV+F
Sbjct: 178 VNSDETF-----NLFVGDLNVDVDDATLAGTFKEFPSFIQAHVMWDMQSGRSRGYGFVSF 232
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+ Q A++ G E+ GR LR+N A++R P
Sbjct: 233 GEQDQAQVAMETKQGFELNGRALRINWASKREP 265
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E ++VG L +++ L FAEAG V SA + DR T +S+GFG+V AK+
Sbjct: 269 EEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKK 328
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGW 225
A+ +G +I GR V ++ PRG P + + F DS + ++ GNL +
Sbjct: 329 AVETMNGREIDGRPVNLDL-ATPRG------PPNPERRAKAFGDSRSEPSATLFVGNLAF 381
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
T + + F +++ ++ +R +G+ +GFG+V F E AL+ + G + EGR
Sbjct: 382 SATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNELGGTDFEGR 441
Query: 286 PLRLNMANER 295
+RL+ + R
Sbjct: 442 NIRLDFSAPR 451
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
I+ G L W + + L+ F ++SA+V +R TG+S+GFG+V F A + A++ M
Sbjct: 274 IFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETM 333
Query: 278 NGVEVEGRPLRLNMANERAPP 298
NG E++GRP+ L++A R PP
Sbjct: 334 NGREIDGRPVNLDLATPRGPP 354
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P+ A DE L++G+L Y M + + FA G V+S +++ ++ T +S G+GF+
Sbjct: 55 QPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEF 114
Query: 162 GSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKI 218
+ A+ ++ ++G+ + G + ++N+ A+ G K Q+ DSP + I
Sbjct: 115 LTRPAAERVLQTYNGTAMPNGAQNFRLNW---------ASAGEKRQD------DSPDYTI 159
Query: 219 YAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+ G+L +T L++ F+ + + AKV+ +R TGR++G+GFV F + A+ M
Sbjct: 160 FVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEM 219
Query: 278 NGVEVEGRPLRLNMA 292
NGV RP+R+ A
Sbjct: 220 NGVHCSSRPMRIGPA 234
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T R++G+GFV G E A+
Sbjct: 159 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTE 218
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKL-QNSYQG-----FVDSPHK--IYAGNLGW 225
+G R +++ P + + + + SYQ + P+ I+ GNL
Sbjct: 219 MNGVHCSSRPMRIG----PAANKNTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDS 274
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T + LR F L+ K+ + GFV F + AL +NG + G+
Sbjct: 275 NVTDEHLRQVFSQYGELVHVKIP------AGKRCGFVQFSDRSCAEEALRILNGTPIGGQ 328
Query: 286 PLRLNMANERAP 297
+RL+ R+P
Sbjct: 329 NIRLSWG--RSP 338
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
A+++E A L+VG L +++ + L F G V A ++ +R T +SRG+G+V S
Sbjct: 161 AASTEEPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKS 220
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNL 223
A++A+ G +I GR + + ++ G A+ + G SP ++ GNL
Sbjct: 221 AAEKALEEMQGKEIDGRPINL---DMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNL 277
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ L + F ++S +V T + +GFG+V F + ++ ++AL+AMNG +E
Sbjct: 278 SFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIE 337
Query: 284 GRPLRLNMANER 295
GRP RL+ + R
Sbjct: 338 GRPCRLDFSTPR 349
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
A+++E A L+VG L +++ + L F G V A ++ +R T +SRG+G+V S
Sbjct: 161 AASTEEPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKS 220
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNL 223
A++A+ G +I GR + + ++ G A+ + G SP ++ GNL
Sbjct: 221 AAEKALEEMQGKEIDGRPINL---DMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNL 277
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ L + F ++S +V T + +GFG+V F + ++ ++AL+AMNG +E
Sbjct: 278 SFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIE 337
Query: 284 GRPLRLNMANER 295
GRP RL+ + R
Sbjct: 338 GRPCRLDFSTPR 349
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A ++VG L +S+ L F G V A ++Y+R TDRSRG+G+V + E A++A
Sbjct: 163 EPATIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKA 222
Query: 171 IRLFDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGW 225
++ G +I GR + + P G + + F D P + ++ GNL +
Sbjct: 223 VKEMHGKEIDGREINCDMSTSKPAAGN--------NDRAKKFGDVPSEPSETLFLGNLSF 274
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + F ++S ++ T + +GFG+V + ED + ALDA+ G ++ R
Sbjct: 275 NADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNR 334
Query: 286 PLRLNMANERAP 297
P+RL+ + R P
Sbjct: 335 PVRLDFSTPRPP 346
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ + L+VGNL + + + L F + SA +V DR + RSRGFG+V + E+A+
Sbjct: 104 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 163
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWG 226
+A G+ + GR ++++F G + + + G SP ++ GN+ +
Sbjct: 164 KAYDAKSGALLEGREMRLDFA-AKDAGNKPQDKAANRAAKHGDTISPESDTLFVGNMPFS 222
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ D F + S ++ ++ +GR +GF +VTF + ED ++A + +NG ++ GRP
Sbjct: 223 ADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRP 282
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 283 VRLDYAKPR 291
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ GNLGWG+ L F+ G SA+V+ +R +GRSRGFG+V F T E Q
Sbjct: 104 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 163
Query: 272 SALDAMNGVEVEGRPLRLNMANERA 296
A DA +G +EGR +RL+ A + A
Sbjct: 164 KAYDAKSGALLEGREMRLDFAAKDA 188
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ + L+VGNL + + + L F + SA +V DR + RSRGFG+V + E+A+
Sbjct: 104 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 163
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWG 226
+A G+ + GR ++++F G + + + G SP ++ GN+ +
Sbjct: 164 KAYDAKSGALLEGREMRLDFA-AKDAGNKPQDKAANRAAKHGDTISPESDTLFVGNMPFS 222
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ D F + S ++ ++ +GR +GF +VTF + ED ++A + +NG ++ GRP
Sbjct: 223 ADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRP 282
Query: 287 LRLNMANER 295
+RL+ A R
Sbjct: 283 VRLDYAKPR 291
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ GNLGWG+ L F+ G SA+V+ +R +GRSRGFG+V F T E Q
Sbjct: 104 ADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQ 163
Query: 272 SALDAMNGVEVEGRPLRLNMANERA 296
A DA +G +EGR +RL+ A + A
Sbjct: 164 KAYDAKSGALLEGREMRLDFAAKDA 188
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
E ++ + EEE ++ K ++D ++ L++GNL +++ L F G ++ I+
Sbjct: 197 EAPKKRKAEEEPATSAKKSKTESADNSSNLFIGNLSWNIDEEWLRREFESFGELSGVRIM 256
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
+R T RSRGFG+V AK A +++ GRT+ +++ + PR A K Q
Sbjct: 257 TERETGRSRGFGYVEYADAASAKAAYEAKKDTELDGRTINLDYAK-PRDANAQAPREKAQ 315
Query: 206 NSYQGFVD--SP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ F D SP + ++ GNL +G+ +R+ F+ Q + ++ + TGR +G+G+
Sbjct: 316 TRARSFGDQTSPESNTLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGYGY 375
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
V F + ++ + AL+ + G ++ GR +RL+ + R
Sbjct: 376 VEFSSVDEARQALNDLQGTDIGGRAIRLDFSTPR 409
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P+ A DE L++G+L Y M + + FA G V+S +++ ++ T +S G+GF+
Sbjct: 55 QPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEF 114
Query: 162 GSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKI 218
+ A+ ++ ++G+ + G + ++N+ A+ G K Q+ DSP + I
Sbjct: 115 LTRPAAERVLQTYNGTAMPNGAQNFRLNW---------ASAGEKRQD------DSPDYTI 159
Query: 219 YAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+ G+L +T L++ F+ + + AKV+ +R TGR++G+GFV F + A+ M
Sbjct: 160 FVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEM 219
Query: 278 NGVEVEGRPLRLNMA 292
NGV RP+R+ A
Sbjct: 220 NGVHCSSRPMRIGPA 234
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 23/193 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T R++G+GFV G E A+
Sbjct: 159 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTE 218
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKL-QNSYQG-----FVDSPHK--IYAGNLGW 225
+G R +++ P + + G + + SYQ + P+ I+ GNL
Sbjct: 219 MNGVHCSSRPMRIG----PAANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDA 274
Query: 226 GLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + LR F GQ G L+ K+ + G FV F + AL +NG ++ G
Sbjct: 275 NVTDEHLRQVF-GQYGELVHVKIPVGKRCG------FVQFADRNCAEEALRVLNGTQIGG 327
Query: 285 RPLRLNMANERAP 297
+ +RL+ R+P
Sbjct: 328 QNIRLSWG--RSP 338
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 7/212 (3%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
P +++ ++E A ++ + + A + L+VGNL +++ L F E G ++ A +
Sbjct: 268 PSKKRKADDEVAAPAKKTKTETAEDTGSKNLFVGNLSWNVDDEWLMREFEEFGEISGARV 327
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+ DR + RS+GFG+V S A A++ GS I GR V+F PR A +
Sbjct: 328 ISDRESGRSKGFGYVEFTSSASAAAALKAKKGSLIDGREANVDF-STPR--SDAPPKDRA 384
Query: 205 QNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
Q F DS + ++ GNL + + +AF +++ ++ ++ TG +GFG
Sbjct: 385 QGRAAAFGDSTNPPSDTLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFG 444
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+VTF + +D ++A +AM G E+ GRP+RL+ A
Sbjct: 445 YVTFSSIDDAKTAFEAMTGAEIAGRPVRLDYA 476
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + L F+ + A+VI +R +GRS+GFG+V F ++ +AL A
Sbjct: 298 LFVGNLSWNVDDEWLMREFEEFGEISGARVISDRESGRSKGFGYVEFTSSASAAAALKAK 357
Query: 278 NGVEVEGRPLRLNMANER--APP 298
G ++GR ++ + R APP
Sbjct: 358 KGSLIDGREANVDFSTPRSDAPP 380
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P+ A DE L++G+L Y M + + FA G V+S +++ ++ T +S G+GF+
Sbjct: 55 QPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEF 114
Query: 162 GSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKI 218
+ A+ ++ ++G+ + G + ++N+ A+ G K Q+ DSP + I
Sbjct: 115 LTRPAAERVLQTYNGTAMPNGAQNFRLNW---------ASAGEKRQD------DSPDYTI 159
Query: 219 YAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+ G+L +T L++ F+ + + AKV+ +R TGR++G+GFV F + A+ M
Sbjct: 160 FVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEM 219
Query: 278 NGVEVEGRPLRLNMA 292
NGV RP+R+ A
Sbjct: 220 NGVHCSSRPMRIGPA 234
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
PE EE E V K LYVGNL S+T L + F G +++ ++
Sbjct: 28 PERSDSEERETTPVVPANATKGGRETSDRVLYVGNLDKSITEEVLRQYFQVGGQISNVKV 87
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+ D+ R+ + FV +A A++ +G QI V++N+
Sbjct: 88 MIDKNNARAN-YAFVEYFKSHDANIALQTLNGKQIENNVVRINW--------------AF 132
Query: 205 QNSYQGFVD-SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Q S Q D + + ++ G+L + + L +AF+ P + V+++ TG SRG+GFV+
Sbjct: 133 Q-SQQALPDENTYNLFVGDLSVDVDDETLCNAFRSFPSFIQGHVMWDMQTGGSRGYGFVS 191
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F E Q A+D+M E+ GRPLR+N A++R
Sbjct: 192 FGDQEQAQLAMDSMQSQELNGRPLRINWASKR 223
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G + S +I+ +++T G+GF+ S E A++
Sbjct: 13 EEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEK 72
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R GP H I+ G+L +
Sbjct: 73 VLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPD------------HSIFVGDLAPDV 120
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 121 TDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRP 180
Query: 287 LRLNMA 292
+R++ A
Sbjct: 181 MRISAA 186
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL ++T L ++ + G E++Y ++ ++ GFV S A+EA++
Sbjct: 229 IFIGNLDQNVTEDELRQICVQFG-----ELIYVKIP-ANKACGFVQYASRASAEEAVQRL 282
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG + V++++ P
Sbjct: 283 HGTTIGQQVVRLSWGRSP 300
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 15/192 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A +E L++G+L Y + + L+ FA G V S +I+ +++T + G+GFV S
Sbjct: 16 ATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVA 75
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A+ ++ ++G+Q+ G +T ++N+ G R GP+ H I+ G+L
Sbjct: 76 AERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPE------------HSIFVGDLS 123
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNGV
Sbjct: 124 PDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCS 183
Query: 284 GRPLRLNMANER 295
RP+R++ A +
Sbjct: 184 TRPMRISAATPK 195
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL ++T L +F + G EIVY ++ RG GFV + A+EAI+
Sbjct: 234 IFVGNLDPNVTEEELRPIFLQFG-----EIVYVKIP-VGRGCGFVQFATRASAEEAIQRM 287
Query: 175 DGSQIGGRTVKVNF 188
G IG + V++++
Sbjct: 288 QGHVIGQQPVRISW 301
>gi|296805985|ref|XP_002843812.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
gi|238845114|gb|EEQ34776.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
Length = 318
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 92 EEEEEAVEEEEEPKV--------------AASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
+E +AV EE +P V + + + +YVGN+ + +T++ L E ++ G
Sbjct: 55 DEARDAVSEERKPFVRPISKRSFGLPPTRPSPEPKSTVYVGNILFDITAADLKEYASKYG 114
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER 197
V + I+YD SRGFG+V ++EEAK+A+ S+ GR + VN+
Sbjct: 115 KVVGSRIIYDS-RGLSRGFGYVKFENIEEAKKAVNDMHLSEFEGRKLSVNY--------- 164
Query: 198 AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
A M K + + Q ++ ++ GN+ +T + L + F P + +V +R TG R
Sbjct: 165 AQMDLK-EETPQRTIEPTRTVFVGNIAHQITDRDLHELFDSIPNVFDVRVAVDRRTGMPR 223
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
GF F E + +A+ G GRPLRL+ ++
Sbjct: 224 GFAHAEFTDVESAIAGFEALKGKAPYGRPLRLDYSH 259
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G + S +I+ +++T G+GF+ S E A++
Sbjct: 13 EEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEK 72
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R GP H I+ G+L +
Sbjct: 73 VLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPD------------HSIFVGDLAPDV 120
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 121 TDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRP 180
Query: 287 LRLNMA 292
+R++ A
Sbjct: 181 MRISAA 186
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL ++T L ++ + G E++Y ++ ++ GFV S A+EA++
Sbjct: 229 IFIGNLDQNVTEDELRQICVQFG-----ELIYVKIP-ANKACGFVQYASRASAEEAVQRL 282
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG + V++++ P
Sbjct: 283 HGTTIGQQVVRLSWGRSP 300
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G + S +I+ +++T G+GF+ S E A++
Sbjct: 35 EEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEK 94
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R GP H I+ G+L +
Sbjct: 95 VLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPD------------HSIFVGDLAPDV 142
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 143 TDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRP 202
Query: 287 LRLNMA 292
+R++ A
Sbjct: 203 MRISAA 208
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL ++T L ++ + G E++Y ++ ++ GFV S A+EA++
Sbjct: 251 IFIGNLDQNVTEDELRQICVQFG-----ELIYVKIP-ANKACGFVQYASRASAEEAVQRL 304
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG + V++++ P
Sbjct: 305 HGTTIGQQVVRLSWGRSP 322
>gi|328772428|gb|EGF82466.1| hypothetical protein BATDEDRAFT_86274 [Batrachochytrium
dendrobatidis JAM81]
Length = 586
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 96 EAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
E + E + L+VGNLP+ +T L ++F +AG VA + I D + RSRG
Sbjct: 263 EVQPHKTETNAGLKHQCTTLFVGNLPFIITWQDLKDLFRQAGDVAVSHIPTDG-SGRSRG 321
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV----NFPEVPRGGERAAMG--------PK 203
FG VTM + E+A +AI++F+ + GR ++V + + + GE P
Sbjct: 322 FGIVTMTTPEDAAKAIQMFNRYILSGRQLEVREDRHVFKASKEGEHHEHSHRTTRLDSPA 381
Query: 204 LQNSYQGFVDSPH---------------------KIYAGNLGWGLTSQGLRDAFQGQPGL 242
Y G D+ H ++ GNL + + Q L+D F+ G+
Sbjct: 382 PLTQYGGQHDTGHIRHEHGYGNRSENYAMKNSGITLFVGNLVYSVIWQELKDLFR-SVGI 440
Query: 243 LSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ I +GRSRGFGFVT T ED A+ +NG E GR + + +
Sbjct: 441 PTKAEIVTSSSGRSRGFGFVTMATQEDANKAIKELNGTEFRGRKIEVRL 489
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 16/187 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + L+VGNL YS+ L ++F G AEIV + RSRGFGFVTM + E+
Sbjct: 409 AMKNSGITLFVGNLVYSVIWQELKDLFRSVGIPTKAEIVTSS-SGRSRGFGFVTMATQED 467
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A +AI+ +G++ GR ++V + G + G + + QG ++ GNL +
Sbjct: 468 ANKAIKELNGTEFRGRKIEVRLDKF---GSHESRG--IPEALQGT-----QVLVGNLPFH 517
Query: 227 LTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ Q L+D F+ +P L + ++ E TGRS+G G V F+T ED AL ++N + G
Sbjct: 518 MRWQDLKDIFRCVAEPQLANVRIDPE--TGRSQGVGTVRFQTEEDATRAL-SLNETVIAG 574
Query: 285 RPLRLNM 291
R + + +
Sbjct: 575 RSIWVQI 581
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++++GNLP++M S L +VF + V S +++ RSRGFG V + E A+ I
Sbjct: 20 QVFIGNLPFTMQSKDLKDVFNKTAGVTSVKVM-SHGNGRSRGFGLVYCDTPEIAQSIITQ 78
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
F G ++ GR ++V V R
Sbjct: 79 FQGLELKGRQIEVRIDRVNR 98
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+++ GNL + + S+ L+D F G+ S KV+ GRSRGFG V +T E QS +
Sbjct: 20 QVFIGNLPFTMQSKDLKDVFNKTAGVTSVKVM-SHGNGRSRGFGLVYCDTPEIAQSIITQ 78
Query: 277 MNGVEVEGRPL-----RLNMAN 293
G+E++GR + R+N +N
Sbjct: 79 FQGLELKGRQIEVRIDRVNRSN 100
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 182 RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPG 241
+T +P G + P + G ++ GNL + +T Q L+D F+ Q G
Sbjct: 246 KTHHAVYPNDDCSGHSTEVQPHKTETNAGLKHQCTTLFVGNLPFIITWQDLKDLFR-QAG 304
Query: 242 LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
++ I +GRSRGFG VT T ED A+ N + GR L +
Sbjct: 305 DVAVSHIPTDGSGRSRGFGIVTMTTPEDAAKAIQMFNRYILSGRQLEV 352
>gi|300176323|emb|CBK23634.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++ V N+P++ S +L E F+ G V A I+Y+R + RSRGFGFV+ S E K+A+ +
Sbjct: 7 KVLVKNIPFTCNSETLIEFFSACGDVIDANILYNRESGRSRGFGFVSFRSEEGLKKALDM 66
Query: 174 FDGSQIGGRTVKV------------------NFPEVPRGGER-AAMGPKLQNSYQGFVDS 214
+G+ + GR ++V +V R R A P SY D+
Sbjct: 67 -NGTNMNGRVLRVIKKEDREDRDERRVRDRRTHKDVKRERSRDRAPAPAPARSY----DN 121
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+K+ L W T L F ++ ++ R TG SRG G V +E E Q AL
Sbjct: 122 TNKLIVLQLPWKCTKADLTKLFDKFGKIVYCNIVVNRETGLSRGMGIVKYEEEESYQKAL 181
Query: 275 DAMNGVEVEGRPL 287
M+ E EGR L
Sbjct: 182 KEMDCFEYEGRKL 194
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D +L V LP+ T + L ++F + G + IV +R T SRG G V E ++
Sbjct: 120 DNTNKLIVLQLPWKCTKADLTKLFDKFGKIVYCNIVVNRETGLSRGMGIVKYEEEESYQK 179
Query: 170 AIRLFDGSQIGGRTVKV 186
A++ D + GR + V
Sbjct: 180 ALKEMDCFEYEGRKLYV 196
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+VG L +++ + L F + GTV A + DR + RSRGFG+V + EA A +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGP--KLQNSYQGFVDS----PHKIYAGNLGWGLT 228
G ++ GR ++V+ + A GP + ++ + F D + ++ G L W LT
Sbjct: 456 HGKELDGRALRVDL--------QPARGPQDRAESRAKHFKDERSAPSNTLFIGGLAWALT 507
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ +AF + ++ E +GR +GFG+V F + ++ AL+ MNG + GRP+R
Sbjct: 508 EDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIR 567
Query: 289 LNMANER 295
++ A +R
Sbjct: 568 IDFAGKR 574
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L+ F+ +L A+V +R +GRSRGFG+V F T+ + A
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 278 NGVEVEGRPLRLNMANERAP 297
+G E++GR LR+++ R P
Sbjct: 456 HGKELDGRALRVDLQPARGP 475
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 121/223 (54%), Gaps = 14/223 (6%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDE---AARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+P+ + ++ + +E E E+ PK A +++ L++GNL +++ L F E G +
Sbjct: 215 KPKADSKKRKADE--EPEQSPKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELK 272
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
I+ DR + RS+GFG+V + E+A +A+ +G+++ R ++++F VPR + A
Sbjct: 273 GVRIITDRDSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRLDF-SVPR--QNNAQ 329
Query: 201 GP-----KLQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
P + + Y P + ++ GNL + T +R+ F+ + ++ +R +G
Sbjct: 330 NPQQRGQERRQQYGDKASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESG 389
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+GFG+V + ++ ++A +A+ G ++ GRP+RL+ + R P
Sbjct: 390 APKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDYSTPRPP 432
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS+ + L+VGNL + T + E F E G++ + DR + +GFG+V MGS++EA
Sbjct: 346 ASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEA 405
Query: 168 KEAIRLFDGSQIGGRTVKVNF--PEVPR 193
K A G+ +GGR +++++ P PR
Sbjct: 406 KAAYEALQGADLGGRPMRLDYSTPRPPR 433
>gi|125549538|gb|EAY95360.1| hypothetical protein OsI_17193 [Oryza sativa Indica Group]
Length = 290
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 11/178 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV N+P+S + + ++FA+ G V E++ + + GF FVTM + EEA A+
Sbjct: 81 KLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIKGKDGKKK-GFAFVTMATAEEAAAAVEK 139
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ + GRT++V F + R G L+ HK+Y NL W + ++
Sbjct: 140 LNSLDVMGRTIRVEFSKSFRKPAPPPPGTILER---------HKLYVSNLPWKARAPNMK 190
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + LSAKV+F+ +G+S G+GFV+F T E+ ++AL ++G E+ GRP+RL
Sbjct: 191 E-FCSKFNPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRW 247
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +LYV NLP+ + ++ E F SA++V+D + +S G+GFV+ G+ EEA+ A
Sbjct: 171 ERHKLYVSNLPWKARAPNMKE-FCSKFNPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAA 229
Query: 171 IRLFDGSQIGGRTVKVNF 188
+ DG ++ GR V++ +
Sbjct: 230 LTELDGKELMGRPVRLRW 247
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L + M + L F++AG + SA+I+ ++ T + G+GF+ GS A++
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + G + K+N+ G +R G S + I+ G+L +
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 171
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + AKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 231
Query: 287 LRLNMANER 295
+R+ A+ +
Sbjct: 232 MRIGPASNK 240
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L + + L FA G V S +I+ ++VT+ G+GF+ S E A++
Sbjct: 14 EEVRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEK 73
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R GP H I+ G+L +
Sbjct: 74 VLQTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPD------------HSIFVGDLAPDV 121
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 122 TDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRP 181
Query: 287 LRLNMA 292
+R++ A
Sbjct: 182 MRISAA 187
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 8/214 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
++++ + E+EE V ++ KV + E L++GNL +++ L F E G +A IV
Sbjct: 221 KSQKRKAEDEEEVVAPKKTKVEPT-EGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIV 279
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
DR + RS+GFG+V + E+A +A +++ GR + V+F AA + Q
Sbjct: 280 TDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANA---RSNAAPRDRAQ 336
Query: 206 NSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ Q F D SP ++ GN+ + + + F +L ++ + +GR +GFG+
Sbjct: 337 SRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGY 396
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
V F + ++ +SA +++NG E+ GR +RL+ + R
Sbjct: 397 VQFSSIDEARSAFESLNGSELAGRAMRLDFSTPR 430
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRS+GFG+V F AED A A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 309 KDTELDGRKLNVDFANARS 327
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%)
Query: 92 EEEEEAVEEEEEPKVA-ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
E E EAVE ++ +V S ++VG L +++ ++ L FA+ G + SA + DR T
Sbjct: 17 EFEGEAVEPAQKARVDDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNT 76
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
RSRGFGFVT S E +A+ L +G +I GR++ V+ V + + + +
Sbjct: 77 GRSRGFGFVTFASPEAVDKALEL-NGKEIDGRSINVD-KSVEKDQNQVR-----ERRART 129
Query: 211 FVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
F D+P +++ GNL + T + L + F + S + R +GR +GFG+V FE
Sbjct: 130 FGDAPSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFED 189
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMA 292
E + A +++ G E+ GR +RL +
Sbjct: 190 IESAKKAHESLVGQEIAGRAIRLEFS 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S+ ++RL+VGNL + T L EVF++ G++ S + R + R +GFG+V +E
Sbjct: 133 APSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIES 192
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE 190
AK+A G +I GR +++ F +
Sbjct: 193 AKKAHESLVGQEIAGRAIRLEFSQ 216
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A++DE L++G+L Y M + L F G V S +++ ++ T +S G+GF+ +
Sbjct: 51 ASADEVRTLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRAS 110
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAM---GPKLQNSYQGFVDSPHKIYAG 221
A+ ++ + G+ + GG++ ++N+ GER++ GP H I+ G
Sbjct: 111 AERVLQTYQGAIMPNGGQSYRLNWATF-SAGERSSRQDDGPD------------HTIFVG 157
Query: 222 NLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+L +T L++ F+ + + AKV+ +R TGRS+G+GFV F + A+ M GV
Sbjct: 158 DLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGV 217
Query: 281 EVEGRPLRLNMANERAPPVLPAAK 304
RP+R+ A + P AK
Sbjct: 218 LCSTRPMRIGPATNKNPAATTQAK 241
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T RS+G+GFV E A+
Sbjct: 154 IFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTE 213
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV-----DSPHK--IYAGNLGWG 226
G R +++ P + A + + SY + P+ I+ GNL
Sbjct: 214 MQGVLCSTRPMRIG----PATNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPN 269
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+T LR F L+ K+ + GFV F + A+ +NG + G+
Sbjct: 270 VTDDHLRQVFSQYGELVHVKIP------SGKRCGFVQFSDRSSAEEAIRVLNGTLLGGQN 323
Query: 287 LRLNMANERAPPVLPAAKETKTE 309
+RL+ P+ K+T+ +
Sbjct: 324 VRLSWGR------TPSNKQTQQD 340
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L + M + L F++AG + SA+I+ ++ T + G+GF+ GS A++
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + G + K+N+ G +R G S + I+ G+L +
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 171
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + AKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 231
Query: 287 LRLNMANER 295
+R+ A+ +
Sbjct: 232 MRIGPASNK 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F A +V A++V+DR T RS+G+GFV G ++E A+
Sbjct: 162 IFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTE 221
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDS-PHK--IYAGNLGWGLT 228
+G R +++ + GG++ QN+ DS P+ ++ G L +T
Sbjct: 222 MNGQYCSSRPMRIGPASNKKNIGGQQQPSA-TYQNTQGTDSDSDPNNTTVFVGGLDPSVT 280
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+ AF L+ K+ + G FV + + A+ +NG ++ G+ +R
Sbjct: 281 DEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIR 334
Query: 289 LNMANERAP 297
L+ R+P
Sbjct: 335 LSWG--RSP 341
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +Y+ N M L E+F+ G S +++ D T RSRGFGFV G+ EEA++A
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAGNLG 224
+ +G ++ GR + V + + R GE +++ N YQG +Y NL
Sbjct: 248 VSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
G+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DGIDDDRLRKEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRG+GFV + E A AI+
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E Y V +Y N G + + LR+
Sbjct: 159 NGMLLNDRKVFVGHFKSRREREL---------EYGAKVMEFTNVYIKNFGEDMDDKRLRE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS KV+ + TGRSRGFGFV + E+ Q A+ MNG EV GR + + A +
Sbjct: 210 IFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268
Query: 295 R 295
R
Sbjct: 269 R 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------------NVFIKNLDESIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRG+GFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDR 166
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPIRI-MWSQRDP 91
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L + M + L F++AG + SA+I+ ++ T + G+GF+ GS A++
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + G + K+N+ G +R G S + I+ G+L +
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 171
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + AKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 231
Query: 287 LRLNMANER 295
+R+ A+ +
Sbjct: 232 MRIGPASNK 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F A +V A++V+DR T RS+G+GFV G ++E A+
Sbjct: 162 IFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTE 221
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDS-PHK--IYAGNLGWGLT 228
+G R +++ + GG++ QN+ DS P+ ++ G L +T
Sbjct: 222 MNGQYCSSRPMRIGPASNKKNIGGQQQPSA-TYQNTQGTDSDSDPNNTTVFVGGLDPSVT 280
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+ AF L+ K+ + G FV + + A+ +NG ++ G+ +R
Sbjct: 281 DEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIR 334
Query: 289 LNMANERAP 297
L+ R+P
Sbjct: 335 LSWG--RSP 341
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L + M + L F++AG + SA+I+ ++ T + G+GF+ GS A++
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + G + K+N+ G +R G S + I+ G+L +
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 171
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + AKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 231
Query: 287 LRLNMANER 295
+R+ A+ +
Sbjct: 232 MRIGPASNK 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F A +V A++V+DR T RS+G+GFV G ++E A+
Sbjct: 162 IFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTE 221
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDS-PHK--IYAGNLGWGLT 228
+G R +++ + GG++ QN+ DS P+ ++ G L +T
Sbjct: 222 MNGQYCSSRPMRIGPASNKKNIGGQQQPSA-TYQNTQGTDSDSDPNNTTVFVGGLDPSVT 280
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+ AF L+ K+ + G FV + + A+ +NG ++ G+ +R
Sbjct: 281 DEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIR 334
Query: 289 LNMANERAP 297
L+ R+P
Sbjct: 335 LSWG--RSP 341
>gi|315046346|ref|XP_003172548.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
gi|311342934|gb|EFR02137.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVGN+ + +T++ L E ++ G V I+YD SRGFG+V SVEEAK+AI
Sbjct: 94 ATIYVGNILFDITAADLKEFASKYGKVLGTRIIYD-TRGLSRGFGYVRFQSVEEAKKAID 152
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
S+ GR + VNF ++ E+ P+ Q ++ I+ GN+ +T + L
Sbjct: 153 EMHLSEYEGRKLSVNFAQIELREEQ----PQKQ------MEPTRTIFVGNIAHQITERDL 202
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F P + +V +R TG RGF F E + + + G GRPLRL+ +
Sbjct: 203 HAIFDDIPNVFDVRVAVDRRTGMPRGFVHAEFTDVESAIAGFEILKGQAPYGRPLRLDYS 262
Query: 293 ----------NERAPPVLPAAKETKTENSIDGS 315
N RAP P E + + D S
Sbjct: 263 HSARRPGEVDNSRAPAANPEV-EAEAQQETDAS 294
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L + M + L F++AG + SA+I+ ++ T + G+GF+ GS A++
Sbjct: 108 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 167
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + G + K+N+ G +R G S + I+ G+L +
Sbjct: 168 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 215
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + AKV+F+R TGRS+G+GFV F ++ A+ MNG RP
Sbjct: 216 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 275
Query: 287 LRLNMANER 295
+R+ A+ +
Sbjct: 276 MRIGPASNK 284
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F A +V A++V+DR T RS+G+GFV G ++E A+
Sbjct: 206 IFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTE 265
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDS-PHK--IYAGNLGWGLT 228
+G R +++ + GG++ QN+ DS P+ ++ G L +T
Sbjct: 266 MNGQYCSSRPMRIGPASNKKNIGGQQQPSA-TYQNTQGTDSDSDPNNTTVFVGGLDPSVT 324
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+ AF L+ K+ + G FV + + A+ +NG ++ G+ +R
Sbjct: 325 DEVLKQAFSPYGELVYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIR 378
Query: 289 LNMANERAP 297
L+ R+P
Sbjct: 379 LSWG--RSP 385
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V + A++A
Sbjct: 1 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKA 60
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWG 226
I+ G +I GR + + G + + F D+P + ++ GNL +
Sbjct: 61 IQEMQGKEIDGRPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLSFN 112
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + F ++S ++ T + +GFG+V F ED + ALDA+ G ++ RP
Sbjct: 113 ADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRP 172
Query: 287 LRLNMANER 295
+RL+ ++ R
Sbjct: 173 VRLDFSSPR 181
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G V A+IV DR++ RS+G G+V S +
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKSEDSV 237
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWG 226
A++L G ++ G V V E + R A P N++ V P H++Y GN+ +
Sbjct: 238 PLALQL-TGQKLLGIPVIVQHTEAEK--NRQARNPDSSNAHPNSV--PFHRLYVGNIHFN 292
Query: 227 LTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T Q L+ F+ P G L + + GRSRG+GFV F A + AL+ MNG ++ GR
Sbjct: 293 VTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGR 350
Query: 286 PLRLNMANERAPP 298
P+R+ + N++ P
Sbjct: 351 PIRVGLGNDKFTP 363
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 107 AASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
AA D A+ ++VG L +++ + L FAE G V SA + DR T +SRGFGFVT S
Sbjct: 301 AADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASP 360
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI-YAGNL 223
E +A+ L +G +I GR + ++ V + ++ + + ++ +P + + GNL
Sbjct: 361 EAVDKALEL-NGKEIDGRPINID-KSVEK--DQNQVRERRAKAFGDATSAPSSVLFVGNL 416
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ T L + F + S ++ +R +GR +GFG+V FE E + A + + G E+
Sbjct: 417 SFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGLAGQEIA 476
Query: 284 GRPLRLNMANER 295
GR +RL+ + R
Sbjct: 477 GRAVRLDFSQPR 488
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 72 FDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAE 131
DG + D E + Q E +A + A S ++ L+VGNL + T L E
Sbjct: 374 IDGRPINIDKSVEKDQNQVRERRAKAFGD------ATSAPSSVLFVGNLSFDATEDQLWE 427
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
VF++ G+V S + DR + R +GFG+V VE AK+A G +I GR V+++F +
Sbjct: 428 VFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGLAGQEIAGRAVRLDFSQ- 486
Query: 192 PR 193
PR
Sbjct: 487 PR 488
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
V G + EA + + VKV+ + +A S I
Sbjct: 278 VANGKRKAEGEAAKPV-------KKVKVD-----EAADDSA--------------STKTI 311
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ G L W + + L F ++SA+V +R TG+SRGFGFVTF + E + AL+ +N
Sbjct: 312 FVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALE-LN 370
Query: 279 GVEVEGRPLRLNMANER 295
G E++GRP+ ++ + E+
Sbjct: 371 GKEIDGRPINIDKSVEK 387
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
P +++ + ++E A ++ D ++ L+VGNL +++ L F E G + A
Sbjct: 238 PASKKRKADDEPAAAAKKSKTDDVEDTGSKNLFVGNLSWNIDDEWLYREFEEFGEITRAN 297
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ DR + RS+GFG+V S A A+ G+ I GR V+F PR + A G +
Sbjct: 298 VLTDRESGRSKGFGYVEFSSSAAAAAALAAKKGALIDGREANVDF-STPRTND--APGAR 354
Query: 204 LQNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
N + F DS + ++ GNL + + + +AF +++ ++ + +G +GF
Sbjct: 355 ADNRAKQFGDSQNPPSDTLFVGNLSFEVDQDAVGEAFGEHGTVVNVRLPTDMDSGNPKGF 414
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+VTFE+ ++ ++A +AM G E+ GRP RL+ A R
Sbjct: 415 GYVTFESIDEAKTAYEAMKGQEIAGRPCRLDYATPR 450
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P DE R ++V L + + L E F +AG VA+A+IV DRV++RS+G G+V
Sbjct: 199 PAQLTEDERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEF 258
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
S E A++L G ++ G V V E + + N Q H++Y G
Sbjct: 259 KSEESLPAALQLT-GQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVLFHRLYVG 317
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
N+ + +T LR F G G L + + GRSRG+GFV + + + AL+ MNG +
Sbjct: 318 NIHFSITEPDLRTVF-GPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKMNGFD 376
Query: 282 VEGRPLRLNMANERAPP 298
+ GRP+R+ + N++ P
Sbjct: 377 LAGRPIRVGLGNDKFTP 393
>gi|327305247|ref|XP_003237315.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
gi|326460313|gb|EGD85766.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
Length = 293
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 91 EEEEEEAVEEEEE------------PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
EE E AVEE++ P A +YVGN+ + +T++ L E ++ G
Sbjct: 48 EEAREPAVEEKKTMVRSVRNSFGLPPSRPEPQPKATVYVGNILFDITAADLKEYASKYGK 107
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
V I+YD SRGFG+V SVEEAK+AI S+ GR + VNF +V E+
Sbjct: 108 VLGTRIIYDS-RGLSRGFGYVKFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQP 166
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
Q ++ I+ GN+ +T + L F P + +V +R TG RG
Sbjct: 167 ----------QRKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRG 216
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F F E + + + G GRPLRL+ ++
Sbjct: 217 FAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDYSH 251
>gi|323448546|gb|EGB04443.1| hypothetical protein AURANDRAFT_32583 [Aureococcus anophagefferens]
Length = 240
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 33/214 (15%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A R++VGNL + + L + F + GTV A ++ +R RS+G G V S +EA AI
Sbjct: 24 ARRVFVGNLSWQTSWQDLKDHFRQCGTVVHASVMEER-PGRSKGCGIVEFESADEAALAI 82
Query: 172 RLFDGSQIGGRTVKVN--------FPEVPRGGERAAM-GPKL------------------ 204
++ GR V+V P GG+R A+ P
Sbjct: 83 ETLHDVELDGRPVQVREDREDRDLAPAKAPGGKRPAVQAPAWGEPRGGGGGGEIEVGRRQ 142
Query: 205 ----QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
Q++ + ++Y GNL WG + Q L+D F+ ++ AKV+ ER GRS+G+G
Sbjct: 143 RKAAQDADGDVIRVARRVYVGNLAWGTSWQDLKDHFRQCGSVVHAKVMEER-PGRSKGWG 201
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
V FE E+ +A++ +N +++GRP+++ E
Sbjct: 202 IVEFEAPEEAVAAIEQLNDSDLDGRPIQVREDRE 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+++ GNL W + Q L+D F+ Q G + + E GRS+G G V FE+A++ A++
Sbjct: 26 RVFVGNLSWQTSWQDLKDHFR-QCGTVVHASVMEERPGRSKGCGIVEFESADEAALAIET 84
Query: 277 MNGVEVEGRPLRLNMANER---APPVLPAAK 304
++ VE++GRP+++ E AP P K
Sbjct: 85 LHDVELDGRPVQVREDREDRDLAPAKAPGGK 115
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L Y M + L FA G V S +++ ++ T +S G+GF+ S A+
Sbjct: 63 DEVRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAER 122
Query: 170 AIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWG 226
++ ++G+ + GG++ ++N+ GER+ DSP + I+ G+L
Sbjct: 123 ILQTYNGAIMPNGGQSFRLNWATF-SAGERSRHD-----------DSPDYTIFVGDLAAD 170
Query: 227 LTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T L++ F+ + + AKV+ +R TGR++G+GFV F + A+ M GV R
Sbjct: 171 VTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTR 230
Query: 286 PLRLNMANERAPPVLPAAKETKTENSIDGSE 316
P+R+ A+ + P K + + GS+
Sbjct: 231 PMRIGPASNKTPTTQSQPKASYQNSQPQGSQ 261
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR+T R++G+GFV E A+
Sbjct: 162 IFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTE 221
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV-------DSPHK--IYAGNLG 224
G R +++ P + + + SYQ + P+ I+ GNL
Sbjct: 222 MQGVLCSTRPMRIG----PASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLD 277
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LR F L+ K+ + GFV F + AL +NG + G
Sbjct: 278 PNVTDDHLRQVFSQYGELVHVKIP------AGKRCGFVQFADRSCAEEALRVLNGTLLGG 331
Query: 285 RPLRLNMANERAP 297
+ +RL+ R+P
Sbjct: 332 QNVRLSWG--RSP 342
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 78 TEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
T +Q +P+ + + + + + E +P ++VGNL ++T L +VF++ G
Sbjct: 241 TPTTQSQPKASYQNSQPQGS-QNENDPNNTT------IFVGNLDPNVTDDHLRQVFSQYG 293
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
E+V+ ++ R GFV A+EA+R+ +G+ +GG+ V++++ P
Sbjct: 294 -----ELVHVKIPAGKR-CGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSP 342
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS-RGFGFVTMGSVEEAK 168
D+ +LYV NLP +T+ L +F + G V + ++V DR S +GF FVT + EA+
Sbjct: 504 DDKNKLYVANLPPHVTNEQLRPIFEKFGRVTACDVVPDRDKQLSCKGFAFVTFATEVEAR 563
Query: 169 EAIRLFDGSQIGGRTVKV---NFPEVP----RGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
AI +G I GR V+ N P+VP GG+ A Q V+ K+Y
Sbjct: 564 SAIPHTNGMTIEGRVVETRIKNEPKVPIHNASGGDTA----------QEDVNEEAKLYVA 613
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL + L+ F + S K++ + TG S+G+GFV E SA+ A++G
Sbjct: 614 NLPSHYEEEDLKTLFSPYGLVQSVKLVLDHTTGLSKGYGFVQMMDQEQAMSAVVAVHGNM 673
Query: 282 VEG--RPLRLNMANERAPPVL 300
VEG +PL +N+AN++ VL
Sbjct: 674 VEGCTKPLVVNIANDKKRGVL 694
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 164 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 221
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G + GF + +Y NL + QGL+D
Sbjct: 222 NGMLLNDRKVFVGHFK-SRQKREAELGARAL----GFTN----VYVKNLHMDMDEQGLQD 272
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F Q G + + + G+SRGFGFV FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 273 LF-SQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQK 331
Query: 295 RA 296
RA
Sbjct: 332 RA 333
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E+F+ GT+ S + D T RS G+ ++ +A+ A+
Sbjct: 76 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 135
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G ++ MG I+ NL + ++ L D
Sbjct: 136 NFEMIKGQPIRIMWSHRDPGLRKSGMG---------------NIFIKNLENSIDNKALYD 180
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 181 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDR 229
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL M L ++F++ G + S +++ D +SRGFGFV EEA++A+
Sbjct: 256 VYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHM 314
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKL-----------QNSYQGFVDSPHKIYAGNL 223
+G ++ G+ + V R +RA +L QN YQG +Y NL
Sbjct: 315 NGKEVRGQLLYVG-----RAQKRAERQSELKRRFEQVKQERQNRYQGV-----NLYVKNL 364
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ + L++ F + SAKV+ E + S+GFGFV F + E+ A+ MNG V
Sbjct: 365 DDSINDERLKEVFSAYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVG 422
Query: 284 GRPLRLNMANER 295
+PL + +A +
Sbjct: 423 TKPLYVALAQRK 434
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + E V++E + + + LYV NL S+ L EVF+ G +
Sbjct: 329 AQKRAERQSELKRRFEQVKQERQNRY----QGVNLYVKNLDDSINDERLKEVFSAYGVIT 384
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + + S+GFGFV S EEA +A+ +G +G + + V + R ER A+
Sbjct: 385 SAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEERKAI 440
Query: 201 GPKLQNSYQGFVDSP 215
L N Y+ + P
Sbjct: 441 ---LTNQYRRQLSRP 452
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 76 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 135
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 136 NFEMIKGQPIRI-MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFST 184
>gi|326477036|gb|EGE01046.1| RNA recognition motif-containing protein [Trichophyton equinum CBS
127.97]
Length = 300
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVGN+ + +T++ L E ++ G V I+YD SRGFG+V SVEEAK+AI
Sbjct: 89 ATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEAKKAID 147
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
S+ GR + VNF +V E+ Q ++ I+ GN+ +T + L
Sbjct: 148 EMHLSEYEGRKLSVNFAQVDLRDEQP----------QRKMEPTRTIFVGNIAHQVTDRDL 197
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F P + +V +R TG RGF F E + + + G GRPLRL+ +
Sbjct: 198 HALFDDIPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDYS 257
Query: 293 N 293
+
Sbjct: 258 H 258
>gi|326472099|gb|EGD96108.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 293
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVGN+ + +T++ L E ++ G V I+YD SRGFG+V SVEEAK+AI
Sbjct: 82 ATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEAKKAID 140
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
S+ GR + VNF +V E+ Q ++ I+ GN+ +T + L
Sbjct: 141 EMHLSEYEGRKLSVNFAQVDLRDEQP----------QRKMEPTRTIFVGNIAHQVTDRDL 190
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F P + +V +R TG RGF F E + + + G GRPLRL+ +
Sbjct: 191 HALFDDIPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDYS 250
Query: 293 N 293
+
Sbjct: 251 H 251
>gi|302506947|ref|XP_003015430.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
gi|291179002|gb|EFE34790.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
Length = 293
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVGN+ + +T++ L E ++ G V I+YD SRGFG+V SVEEAK+AI
Sbjct: 82 ATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEAKKAID 140
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
S+ GR + VNF +V E+ Q ++ I+ GN+ +T + L
Sbjct: 141 EMHLSEYEGRKLSVNFAQVDLRDEQP----------QRKMEPTRTIFVGNIAHQVTDRDL 190
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F P + +V +R TG RGF F E + + + G GRPLRL+ +
Sbjct: 191 HALFDDIPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDYS 250
Query: 293 N 293
+
Sbjct: 251 H 251
>gi|302659529|ref|XP_003021453.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
gi|291185354|gb|EFE40835.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
Length = 293
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVGN+ + +T++ L E ++ G V I+YD SRGFG+V SVEEAK+AI
Sbjct: 82 ATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEAKKAID 140
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
S+ GR + VNF +V E+ Q ++ I+ GN+ +T + L
Sbjct: 141 EMHLSEYEGRKLSVNFAQVDLRDEQP----------QRKMEPTRTIFVGNIAHQVTDRDL 190
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F P + +V +R TG RGF F E + + + G GRPLRL+ +
Sbjct: 191 HALFDDIPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDYS 250
Query: 293 N 293
+
Sbjct: 251 H 251
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G V S +I+ ++VT G+GF+ S E A++
Sbjct: 12 EEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEK 71
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R G S H I+ G+L +
Sbjct: 72 ILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPG------------SDHSIFVGDLAPDV 119
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 120 TDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRP 179
Query: 287 LRLNMA 292
+R++ A
Sbjct: 180 MRISAA 185
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 15/191 (7%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
++ + D A LYVGNL +T + L E+F+ G V +I+ D++T S G+GFV
Sbjct: 14 RLGSGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDH 73
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A A++ +G + G+ ++VN+ E +A S +I+ G+L
Sbjct: 74 RAADMALQSLNGRVLHGQELRVNWAFQKDQREDSA--------------SQFQIFVGDLA 119
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L +AFQ G A+V+++ TGRS+G+GFV+F+T D + AL M+G +
Sbjct: 120 SDINDKLLCEAFQ-SCGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGS 178
Query: 285 RPLRLNMANER 295
R +R A +
Sbjct: 179 RRIRCGWAQHK 189
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+++VG+L + L E F G A A +++D T RS+G+GFV+ + +A++A+
Sbjct: 112 QIFVGDLASDINDKLLCEAFQSCGC-ADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQ 170
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGP--KLQNSYQGFVDSPH-KIYAGNLGWGLTSQ 230
G+ +G R ++ + + + +A+ ++ + D + +Y GNL ++
Sbjct: 171 MSGTMLGSRRIRCGWAQHKQENSQASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDA 230
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+ A +L K+ R G+ F F + D A+ ++G + G+ L+ +
Sbjct: 231 ELQTAVSQFGAVLDVKIY------RKGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCS 284
Query: 291 MANERA 296
+A
Sbjct: 285 WGRHQA 290
>gi|451856277|gb|EMD69568.1| hypothetical protein COCSADRAFT_32266 [Cochliobolus sativus ND90Pr]
Length = 754
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 9/219 (4%)
Query: 106 VAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
V + E AR L+V +L +TS L E F+E+ + +A +V D+ T S+G+GFVT
Sbjct: 34 VGTAKEVARRQLFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRESKGYGFVTFAD 93
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEV-PRGGE----RAAMGPKLQNSYQGFVDSPHKI 218
VE+A+ A + +QI G+ +KV+F E R GE RAA K + Q KI
Sbjct: 94 VEDAQRAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRAADRIKAEREQQVKEAQVPKI 153
Query: 219 YAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
NL W + T + L F+ G ++ + ++ G RGFGFV+ ++ + A+ +
Sbjct: 154 IVRNLPWTIKTPEDLEKLFRCY-GKVNFANLPKKPNGELRGFGFVSLRGKKNAEKAMQEL 212
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDGSE 316
NG E+ GRP+ ++ A +R + E + + DG+E
Sbjct: 213 NGKEIGGRPIAVDWAVDRDTWLNLQQTEQEGDAKADGNE 251
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++V N+P+++ L E F + G + A +V DR T+R +G FV
Sbjct: 317 VFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERPKGTAFV 361
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G V S +I+ ++VT G+GF+ S E A++
Sbjct: 12 EEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEK 71
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G R G S H I+ G+L +
Sbjct: 72 ILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPG------------SDHSIFVGDLAPDV 119
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 120 TDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRP 179
Query: 287 LRLNMA 292
+R++ A
Sbjct: 180 MRISAA 185
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 16/209 (7%)
Query: 99 EEEEEPKVAAS-----DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
++ EPK + DE R ++V L + + L E F + G V A+IV DR++
Sbjct: 157 DDRREPKRDGTPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQ 216
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
RS+G G+V + E +A++L G ++ G V V E + R A P+ +
Sbjct: 217 RSKGVGYVEFKNEESVTQALQLT-GQKLLGIPVIVQVTEAEK--NRQARNPEASGPHPNS 273
Query: 212 VDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAED 269
+ P H++Y GN+ + +T Q L+ F+ P G L + + GRSRG+GFV F A
Sbjct: 274 I--PFHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAGQ 329
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 330 AREALEKMNGFDLAGRPIRVGLGNDKFTP 358
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G V A+IV DR++ RS+G G+V + +
Sbjct: 180 DERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKNEDSV 239
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWG 226
+ A++L G ++ G V V E + R A P N + + P H++Y GN+ +
Sbjct: 240 QLALQLT-GQKLLGIPVIVQHTEAEK--NRQARNPDASNGHPNSI--PFHRLYVGNIHFN 294
Query: 227 LTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T Q L+ F+ P G L + + GRSRG+GFV F A + AL+ MNG ++ GR
Sbjct: 295 VTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGR 352
Query: 286 PLRLNMANERAPP 298
P+R+ + N++ P
Sbjct: 353 PIRVGLGNDKFTP 365
>gi|301087136|gb|ADK60785.1| chloroplast ribonucleoprotein [Arachis diogoi]
Length = 146
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 61/78 (78%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNLP+S+ S+ LAE+F AGTV E++YD+++ RSRGFGFVTM S+EEA+ A +
Sbjct: 69 KLFVGNLPFSVDSAQLAELFESAGTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAKQQ 128
Query: 174 FDGSQIGGRTVKVNFPEV 191
FDG ++ GR ++VN+ V
Sbjct: 129 FDGYELDGRALRVNWYAV 146
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ GNL + + S L + F+ + +VI+++ +GRSRGFGFVT + E+ ++A
Sbjct: 69 KLFVGNLPFSVDSAQLAELFESAGTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAKQQ 128
Query: 277 MNGVEVEGRPLRLNM 291
+G E++GR LR+N
Sbjct: 129 FDGYELDGRALRVNW 143
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G V A+IV DR++ RS+G G+V S +
Sbjct: 179 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGVGYVEFKSEDAV 238
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGW 225
++A++L G ++ G V V E + R A P +S G +S H++Y GN+ +
Sbjct: 239 QQALQL-TGQKLLGIPVIVQHTEAEK--NRQARNP---DSTSGHPNSIPFHRLYVGNIHF 292
Query: 226 GLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T Q L+ F+ P G L + + GRSRG+GFV F A + AL+ MNG ++ G
Sbjct: 293 NVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAG 350
Query: 285 RPLRLNMANERAPP 298
RP+R+ + N++ P
Sbjct: 351 RPIRVGLGNDKFTP 364
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Query: 81 SQDEPETEQEEEEEEEAV----EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA 136
+++EP +++ ++EE A + EEE + +++ L+VGNL +++ S L + F
Sbjct: 135 TEEEPSKKRKADDEEPAAAKKAKTEEEGETSST-----LFVGNLSWNVDDSVLYDEFKGF 189
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
+ A ++ DR T RSRGFG+V SVE A+ A G + GR +K++F R
Sbjct: 190 DGLTGARVITDRETQRSRGFGYVEFDSVEHAQAAFDKMTGYFLDGRELKIDFS-TGRAKS 248
Query: 197 RAAMGPKLQNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
A + G V SP ++ GNL + + + F + S ++ + +G
Sbjct: 249 NDANPAASRAKKYGDVTSPESDTLFVGNLSFDADEETVSAFFSEVANVKSLRLPTDMESG 308
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R +GFG+V+F + ED + A D +NG GR +RL+ +
Sbjct: 309 RPKGFGYVSFYSLEDSKKAFDTLNGQSCAGRNVRLDYS 346
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + L D F+G GL A+VI +R T RSRGFG+V F++ E Q+A D M
Sbjct: 168 LFVGNLSWNVDDSVLYDEFKGFDGLTGARVITDRETQRSRGFGYVEFDSVEHAQAAFDKM 227
Query: 278 NGVEVEGRPLRLNMANERA 296
G ++GR L+++ + RA
Sbjct: 228 TGYFLDGRELKIDFSTGRA 246
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
M +E+ I +G + GRT++VNF P+ E + ++ HK++
Sbjct: 1 MSCIEDCNAVIENLNGKEFLGRTLRVNFSSKPKPKEPL------------YPETEHKLFV 48
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL W +T++ L AFQ ++ A+V+++ TGRSRG+GFV + T ++++A+ A+N V
Sbjct: 49 GNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDV 108
Query: 281 EVEGRPLRLNMA 292
E+EGR +R+++A
Sbjct: 109 ELEGRAMRVSLA 120
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+L+VGNL +S+T+ L + F E GTV A ++YD T RSRG+GFV + E + A+
Sbjct: 45 KLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAA 104
Query: 174 FDGSQIGGRTVKVNFPEVPR 193
+ ++ GR ++V+ + R
Sbjct: 105 LNDVELEGRAMRVSLAQGKR 124
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y M + L +FA G V SA+++ ++ T G+GF+ S A+
Sbjct: 25 EEVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAER 84
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ ++G+Q+ + ++N+ G +R GP+L I+ G+L +
Sbjct: 85 VLLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPEL------------SIFVGDLAPDV 132
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L + F+ + P + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 133 TDYMLHETFRTRFPSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRP 192
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 193 MRISAATPK 201
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DEA L++G+L Y M + L F++AG V S +I+ ++ T + G+GF+ + A++
Sbjct: 67 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQ 126
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G + + K+N+ G +R G S + I+ G+L +
Sbjct: 127 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDG------------SDYTIFVGDLASDV 174
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+D F+ + P + AKV+F+R TGRS+G+GFV F +++ A+ MNG R
Sbjct: 175 TDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRA 234
Query: 287 LRLNMANER 295
+RL A+ +
Sbjct: 235 MRLGPASNK 243
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F + +V A++V+DR T RS+G+GFV +E A+
Sbjct: 165 IFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTE 224
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPK-----LQNSYQGFVDS-PHK--IYAGNLGW 225
+G R +++ P ++ GP+ QN+ DS P+ ++ G L
Sbjct: 225 MNGQYCSSRAMRLG----PASNKKNTGGPQPSSAIYQNTQGTDSDSDPNNTTVFVGGLDP 280
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T + L+ F LL K+ + G FV + + A+ +NG ++ G+
Sbjct: 281 SVTDELLKQTFSPYGELLYVKIPVGKRCG------FVQYSNRASAEEAIRVLNGSQLGGQ 334
Query: 286 PLRLNMANERAPPVLPAAKETKTENS 311
+RL+ PA K+ + E S
Sbjct: 335 SIRLSWGRS------PANKQPQQEQS 354
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P+ DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V
Sbjct: 172 PQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 231
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ + + A++L G ++ G V V E + R + + + H++Y G
Sbjct: 232 KNEDSVQAALQL-TGQKLLGIPVIVQLTEAEK--NRQVRTTETSGHHPNSIPF-HRLYVG 287
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + GRSRG+GFV F A + AL+ MNG
Sbjct: 288 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGF 345
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 346 DLAGRPIRVGLGNDKFTP 363
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P+ DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V
Sbjct: 172 PQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 231
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ + + A++L G ++ G V V E + R + + + H++Y G
Sbjct: 232 KNEDSVQAALQL-TGQKLLGIPVIVQLTEAEK--NRQVRTTETSGHHPNSIPF-HRLYVG 287
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + GRSRG+GFV F A + AL+ MNG
Sbjct: 288 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGF 345
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 346 DLAGRPIRVGLGNDKFTP 363
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P+ DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V
Sbjct: 172 PQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 231
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ + + A++L G ++ G V V E + R + + + H++Y G
Sbjct: 232 KNEDSVQAALQL-TGQKLLGIPVIVQLTEAEK--NRQVRTTETSGHHPNSIPF-HRLYVG 287
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F+ P G L + + GRSRG+GFV F A + AL+ MNG
Sbjct: 288 NIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGF 345
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 346 DLAGRPIRVGLGNDKFTP 363
>gi|452003351|gb|EMD95808.1| hypothetical protein COCHEDRAFT_1190998 [Cochliobolus
heterostrophus C5]
Length = 756
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 111 EAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
E AR L+V +L +TS L E F+E+ + +A +V D+ T S+G+GFVT VE+A+
Sbjct: 38 EVARRQLFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQ 97
Query: 169 EAIRLFDGSQIGGRTVKVNFPEV-PRGGE----RAAMGPKLQNSYQGFVDSPHKIYAGNL 223
A + +QI G+ +KV+F E R GE RAA K + Q KI NL
Sbjct: 98 RAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRAADRIKAEREQQVKEAQVPKIIVRNL 157
Query: 224 GWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + T + L F+ G ++ + ++ G RGFGFV+ ++ + A+ +NG E+
Sbjct: 158 PWTIKTPEDLEKLFRSY-GKVNFANLPKKPNGELRGFGFVSLRGKKNAEKAMQELNGKEI 216
Query: 283 EGRPLRLNMANERAPPVLPAAKETKTENSIDGSE 316
GRP+ ++ A +R + E + + DG E
Sbjct: 217 SGRPIAVDWAVDRDTWLNLQKTEQEGDAKADGDE 250
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++V N+P+++ L E F + G + A +V DR T+R +G FV
Sbjct: 319 VFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERPKGTAFV 363
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 96 EAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
+AVE+ EE ++A L+ GNL + + + L E F + + A +V D+ + RSRG
Sbjct: 204 KAVEDSEE-------KSATLWCGNLGWGIDDNILYEEFKDFEGLTGARVVSDKESGRSRG 256
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
FG++ + E A++A +G + GR ++++F + + S G V SP
Sbjct: 257 FGYIDFDTHENAEKAFNAKNGGDLQGREMRLDF--AAKPAAAPQDRAAARASKHGDVVSP 314
Query: 216 --HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
++ GNL + G+ F + S ++ + +GR +GF +V+F + +D ++A
Sbjct: 315 PSDTLFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNA 374
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
+ +NG +++GRP+RL+ A R
Sbjct: 375 FEQLNGADIDGRPVRLDFAKPR 396
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 8/214 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
++++ + E+EE V ++ +V + E L++GNL +++ L F E G +A IV
Sbjct: 205 KSQKRKAEDEEEVVAPKKTRVEPT-EGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIV 263
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
DR + RS+GFG+V + E+A +A +++ GR + V+F AA + Q
Sbjct: 264 TDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANAR---SNAAPRDRAQ 320
Query: 206 NSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ Q F D SP ++ GN+ + + + F +L ++ + +GR +GFG+
Sbjct: 321 SRAQNFGDQKSPESDTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGY 380
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
V F + ++ +SA +++NG E+ GR +RL+ + R
Sbjct: 381 VQFSSIDEARSAFESLNGSELAGRAMRLDFSTPR 414
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRS+GFG+V F AED A A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 293 KDTELDGRKLNVDFANARS 311
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 104 PKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P+ DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V
Sbjct: 171 PQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEF 230
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ + + A++L G ++ G V V E + R + + + H++Y G
Sbjct: 231 KNEDSVQAALQL-TGQKLLGIPVIVQLTEAEK--NRQVRTTETSGHHPNSIPF-HRLYVG 286
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T Q L++ F +P G L + + GRSRG+GFV F A + AL+ MNG
Sbjct: 287 NIHFSITEQDLQNVF--EPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGF 344
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 345 DLAGRPIRVGLGNDKFTP 362
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L ++ + L F ++G V A+IV DRV+ RS+G G+V E ++A+ L
Sbjct: 214 VFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEESVQKALELT 273
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
G ++ + V E + + R + G Q++ F H++Y GN+ + + LR
Sbjct: 274 -GQKLMNIPIIVQLTEAEKNRQARTSEGQPTQSNGIPF----HRLYVGNIHFSIEESDLR 328
Query: 234 DAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D F+ P G L + + TGRS+G+GFV F +++ + AL+ MNG EV GRP+R+ +
Sbjct: 329 DVFE--PFGELEFVQLQKEDTGRSKGYGFVQFAKSDEAKIALEKMNGFEVAGRPIRVGLG 386
Query: 293 NERAPPVLPAA 303
+++ P +A
Sbjct: 387 SDKFTPETTSA 397
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
++ P +++DE L++G+L Y M + L F+ G V S +++ ++ T++S G+GF
Sbjct: 60 QQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGF 119
Query: 159 VTMGSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP- 215
+ S A+ ++ F+G+ + GG+ ++N+ G +R DSP
Sbjct: 120 LEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHD-------------DSPD 166
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+ I+ G+L ++ L + F+ + + AKV+ +R TGR++G+GFV F + A+
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 275 DAMNGVEVEGRPLRLNMANER 295
M GV RP+R+ A+ +
Sbjct: 227 TEMQGVLCSTRPMRIGPASNK 247
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y M + L +FA G V SA+++ ++ T G+GF+ S A+
Sbjct: 25 EEVRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAER 84
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ ++G+Q+ + ++N+ G +R GP+L I+ G+L +
Sbjct: 85 VLLAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPEL------------SIFVGDLAPDV 132
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L + F+ + P + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 133 TDYMLHETFRTRFPSVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRP 192
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 193 MRISAATPK 201
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ S +L + F+ G + S ++ D SRGFGFV + E A++AI
Sbjct: 101 VFIKNLEDSIDSKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETNEAAQQAIGTM 158
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V V + R E A + N IY NL + QGL
Sbjct: 159 NGMLLNDRKVFVGHFKSQREREAELGAQALEFTN-----------IYVKNLSVDMDEQGL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+D F +LS KV+ + +G SRGFGFV FE E+ Q A+D MNG EV G+ L + A
Sbjct: 208 QDLFFAFGNMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRA 266
Query: 293 NERA 296
+RA
Sbjct: 267 QKRA 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL M L ++F G + S +++ D + SRGFGFV EE
Sbjct: 185 AQALEFTNIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDN-SGHSRGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL-----------QNSYQGFVDSP 215
A++A+ +G ++ G+ + V R +RA +L Q Y+G
Sbjct: 244 AQKAVDHMNGKEVSGQQLYVG-----RAQKRAERQNELKRRFEQLKQDRQTRYRGV---- 294
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+Y NL ++ + LR F + SAKV+ E S+GFGFV F + E+ A+
Sbjct: 295 -NLYVKNLDDSISDEKLRTVFSPYGVITSAKVMTE--GDHSKGFGFVCFSSPEEATKAVT 351
Query: 276 AMNGVEVEGRPLRLNMANER 295
MNG V +PL + +A +
Sbjct: 352 EMNGCIVGTKPLYVALAQRK 371
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + + G ++ +G ++ NL + S+ L D
Sbjct: 73 NFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NVFIKNLEDSIDSKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
F +LS KV + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 118 TFSTFGNILSCKVACDEHG--SRGFGFVHFETNEAAQQAIGTMNGMLLNDR 166
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFST 121
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 79 EDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
+D EPE ++ + EE +++E ++VG L +++ L + F +
Sbjct: 87 DDDXXEPEAKKAKSEE-------------SAEEPGTMFVGRLSWNVDDDGLKQFFVDENV 133
Query: 139 --VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP-EVPRGG 195
V SA ++ + + RS+GFG+V SV A+ A++ +DG++I GR V ++ PR
Sbjct: 134 PGVXSARVITENGSGRSKGFGYVDFDSVAHAEAAVKKYDGAEIDGRAVHLDMAASKPRS- 192
Query: 196 ERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
++ + N + + D+P + ++ GNL + T +R AF+ + ++
Sbjct: 193 --SSPNDRANNRAKKYGDTPSEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRP 250
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
T RGF +V F + E+ ++ALD MNG + GR +RL+ + R
Sbjct: 251 GTEDPRGFAYVQFSSVEEAKAALDGMNGEYINGRSVRLDYSTPR 294
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A +E A L+VG L +++ L F G V A ++ +R T +SRG+G+V
Sbjct: 207 KAATDEEPATLFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGK 266
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
A++A+ G +I GR + ++ P + +RA + +S D+ ++
Sbjct: 267 SFAEKALAEMQGKEIDGRPINLDMSTGKPHASKSNDRAK---QFGDSQSPPSDT---LFI 320
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL + GL + F ++S ++ T + +GFG+V F + ++ ++AL+A+NG
Sbjct: 321 GNLSFNANRDGLFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGQ 380
Query: 281 EVEGRPLRLNMANER 295
+EGRP RL+ + R
Sbjct: 381 YIEGRPCRLDFSAPR 395
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E+ L V NL Y+ T +L EVF +A ++ V R +G+ FV + E+AKEA
Sbjct: 453 ESTTLIVNNLSYAATEETLQEVFKKASSIR----VPQNNQGRPKGYAFVDFATAEDAKEA 508
Query: 171 IRLFDGSQIGGRTVKVNF--PEVPRGGE--RAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ + ++I GRT+++ F P +G R G Q S FV L
Sbjct: 509 LNSLNNTEIEGRTIRLEFSSPSWQKGNTNARGGGGGFGQQSKTLFVRG--------LSED 560
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T + LR++F+G +SA+++ +R TG S+GFGFV F + ED ++A +AM E++G
Sbjct: 561 TTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNK 617
Query: 287 LRLNMA 292
+ L+ A
Sbjct: 618 VTLDFA 623
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 103 EPKVAASD---EAARLYVGNL----PYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRG 155
EPK +D A ++VGNL + + L E F + + E++ R++ +R
Sbjct: 266 EPKKKKTDGPASAFTMFVGNLVSAKDFEELKTGLREFFGKK----NIEVLDVRIS-ATRR 320
Query: 156 FGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
FG+V S E+ +A+++ +G ++ G VK+ E + E K +++
Sbjct: 321 FGYVDFSSAEDLDKALQM-NGKKLMGVEVKL---EKAKSKETMKENKKERDA-------- 368
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++ NL + +T +R+ F+ L +++ + G SRG +V F+T + AL+
Sbjct: 369 RTLFLKNLPYRITEDDIREVFEN---ALEVRIVMNK-DGNSRGMAYVEFKTEAEADKALE 424
Query: 276 AMNGVEVEGRPLRLNMANERA 296
G E+EGR + ++ E++
Sbjct: 425 EKQGTEIEGRAVVIDFTGEKS 445
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G + GF + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFK-SRQKREAELGARAL----GFTN----IYVKNLRVDMDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F Q G + + G+SRGFGF+ FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 210 LF-SQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Query: 295 RA 296
RA
Sbjct: 269 RA 270
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E+F+ GT+ S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G R+ MG I+ NL + ++ L D
Sbjct: 73 NFEMIKGQPIRIMWSHRDPGLRRSGMG---------------NIFIKNLENSIDNKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R +
Sbjct: 118 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV 168
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL M L ++F++ G S +++ D +SRGFGF+ EEA++A+
Sbjct: 193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDS-NGQSRGFGFINFEKHEEAQKAVDHM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERA-----------AMGPKLQNSYQGFVDSPHKIYAGNL 223
+G ++ G+ + V R +RA M + QN YQG +Y NL
Sbjct: 252 NGKEVSGQLLYVG-----RAQKRAERQNELKRRFEQMKQERQNRYQGV-----NLYVKNL 301
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ L++ F + SAKV+ E + S+GFGFV F + E+ A+ MNG V
Sbjct: 302 DDSINDDRLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVG 359
Query: 284 GRPLRLNMANER 295
+PL + +A +
Sbjct: 360 TKPLYVALAQRK 371
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + E +++E + + + LYV NL S+ L EVF+ G +
Sbjct: 266 AQKRAERQNELKRRFEQMKQERQNRY----QGVNLYVKNLDDSINDDRLKEVFSTYGVIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + + S+GFGFV S EEA +A+ +G +G + + V + R ER A+
Sbjct: 322 SAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSYQ 209
L N Y+
Sbjct: 378 ---LTNQYR 383
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 73 NFEMIKGQPIRI-MWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFST 121
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 30/203 (14%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +E L++G+L Y + S L++ FA +G V S +I+ +++T + G+GFV S A
Sbjct: 5 AIEEVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASA 64
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ +R F+G+Q+ G +T ++N+ G H I+ G+L
Sbjct: 65 EAFLRTFNGAQMPGTDQTFRLNWASFGDSGPD------------------HSIFVGDLAP 106
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P + +KV+ + TGRS+G+GFV F A+ MNGV
Sbjct: 107 DVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCST 166
Query: 285 RPLRLNMA---------NERAPP 298
RP+R++ A ++ APP
Sbjct: 167 RPMRISAATPKKNASFQHQYAPP 189
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V +++V D T RS+G+GFV + A+
Sbjct: 99 IFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTE 158
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY-------------- 219
+G R +++ +A PK S+Q P +Y
Sbjct: 159 MNGVYCSTRPMRI-----------SAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAP 207
Query: 220 ----------AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
GNL +T + L+ AF ++ K+ Y G+ G+G+V F T
Sbjct: 208 ENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKI----YAGK--GYGYVQFGTRAS 261
Query: 270 LQSALDAMNG 279
+ A+ M G
Sbjct: 262 AEDAIQRMQG 271
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
+GNL ++T L + F + G + +I +G+G+V G+ A++AI+ G
Sbjct: 218 IGNLDLNVTEEELKQAFVQFGDIVLVKIY------AGKGYGYVQFGTRASAEDAIQRMQG 271
Query: 177 SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
IG + +++++ + M P ++Y G+
Sbjct: 272 KVIGQQVIQISWGSTLTARQ---MDPSQWSAYYGY 303
>gi|410730519|ref|XP_003980080.1| hypothetical protein NDAI_0G04190 [Naumovozyma dairenensis CBS 421]
gi|401780257|emb|CCK73404.1| hypothetical protein NDAI_0G04190 [Naumovozyma dairenensis CBS 421]
Length = 359
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R++VGNL + T+ L + F++ G V +A+I+ R +G G V + ++A EAI
Sbjct: 69 RVFVGNLSFDTTAEDLVDYFSQVGEVVTADII--TFKGRHKGLGTVEFTNADDATEAIER 126
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAM--GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
D + GR + V + P G + M P + QG+ + + NL + +T Q
Sbjct: 127 CDNTHFMGRDIYVKDDQPPPGARQKTMRIAPIRDINRQGY-----EAFVINLPYSITWQN 181
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L+D F+ +L A + + Y G SRG G V + T + + A+D NG E+EGR L +
Sbjct: 182 LKDLFRECGDILRADIELD-YNGFSRGLGSVLYATEDAMHRAIDTFNGYELEGRVLEV-- 238
Query: 292 ANERAPPVLPAAKETKTENSIDGSELLSSIST 323
R P+ KE E ++D E+ SI T
Sbjct: 239 ---REGKFNPSHKEHIPEGTLD--EVEPSIPT 265
>gi|115460220|ref|NP_001053710.1| Os04g0591000 [Oryza sativa Japonica Group]
gi|38346724|emb|CAE04874.2| OSJNBa0086O06.22 [Oryza sativa Japonica Group]
gi|113565281|dbj|BAF15624.1| Os04g0591000 [Oryza sativa Japonica Group]
gi|215706340|dbj|BAG93196.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 291
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV N+P+S + + ++FA+ G V E++ + + +GF FVTM + EEA A+
Sbjct: 81 KLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIKGKDG-KKKGFAFVTMATAEEAAAAVEK 139
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ + GRT++V F + R G + HK+Y NL W + ++
Sbjct: 140 LNSLDVMGRTIRVEFSKSFRKPA--------PPPPPGTILERHKLYVSNLPWKARAPNMK 191
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ F + LSAKV+F+ +G+S G+GFV+F T E+ ++AL ++G E+ GRP+RL
Sbjct: 192 EFFS-KFNPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRL 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +LYV NLP+ + ++ E F++ + SA++V+D + +S G+GFV+ G+ EEA+ A
Sbjct: 172 ERHKLYVSNLPWKARAPNMKEFFSKFNPL-SAKVVFDSPSGKSAGYGFVSFGTKEEAEAA 230
Query: 171 IRLFDGSQIGGRTVKVNF 188
+ DG ++ GR V++ +
Sbjct: 231 LTELDGKELMGRPVRLRW 248
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
M +VEEA +AI +F I GR + VN R R G +++ + F + + Y
Sbjct: 1 MSTVEEADKAIEMFSRYDISGRLLNVN-----RASSR---GTRMERPQRQFAPA-FRAYV 51
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL W + L F ++ AKV+++R TGRSRGFGFV+ + E+L A+ A++G
Sbjct: 52 GNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 111
Query: 281 EVEGRPLRLNMANER 295
E++GRPLR+N+A ER
Sbjct: 112 ELDGRPLRVNVAAER 126
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A R YVGNLP+ + S L ++F+E G V A++VYDR T RSRGFGFV+M S EE +AI
Sbjct: 46 AFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAI 105
Query: 172 RLFDGSQIGGRTVKVN 187
DG ++ GR ++VN
Sbjct: 106 SALDGQELDGRPLRVN 121
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S+E L++GNL +++ L F E G +A IV DR + RSRGFG+V + +A
Sbjct: 227 SNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAA 286
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD--SPHK--IYAGNLG 224
+A +++ GR + V+F G AA + Q+ Q F D SP ++ GN+
Sbjct: 287 KAHAAKKDAELDGRKLNVDFAN---GRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIA 343
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + +AF +L ++ + +GR +GFG+V F + ++ +SA A+NG ++ G
Sbjct: 344 FSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGG 403
Query: 285 RPLRLNMANER 295
R +RL+ ++ R
Sbjct: 404 RSMRLDFSSPR 414
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRSRGFG+V F A D A A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 292
Query: 278 NGVEVEGRPLRLNMANERA 296
E++GR L ++ AN R+
Sbjct: 293 KDAELDGRKLNVDFANGRS 311
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +Y+ N M L E+F+ G S +++ D + RSRGFGFV G+ EEA++A
Sbjct: 189 EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAGNLG 224
+ +G ++ GR V V + + R GE +++ N YQG +Y NL
Sbjct: 248 VTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
G+ LR F + S KV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DGIDDDRLRKEFSPYGTITSTKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRG+GFV + E A AI+
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E Y V +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVGHFKSRREREL---------EYGAKVMEFTNVYIKNFGEDMDDKRLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS KV+ + +GRSRGFGFV + E+ Q A+ MNG EV GR + + A +
Sbjct: 210 IFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQK 268
Query: 295 R 295
R
Sbjct: 269 R 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LY+G+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------------NVFIKNLDDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + Y SRG+GFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTMNGMLLNDR 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPIRI-MWSQRDP 91
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 30/203 (14%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +E L++G+L Y + S L++ FA +G V S +I+ +++T + G+GFV S A
Sbjct: 5 AIEEVRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASA 64
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ +R F+G+Q+ G +T ++N+ G H I+ G+L
Sbjct: 65 EAFLRTFNGAQMPGTDQTFRLNWASFGDSGPD------------------HSIFVGDLAP 106
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P + +KV+ + TGRS+G+GFV F A+ MNGV
Sbjct: 107 DVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCST 166
Query: 285 RPLRLNMA---------NERAPP 298
RP+R++ A ++ APP
Sbjct: 167 RPMRISAATPKKNASFQHQYAPP 189
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V +++V D T RS+G+GFV + A+
Sbjct: 99 IFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTE 158
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY-------------- 219
+G R +++ +A PK S+Q P +Y
Sbjct: 159 MNGVYCSTRPMRI-----------SAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAP 207
Query: 220 ----------AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
GNL +T + L+ AF ++ K+ Y G+ G+G+V F T
Sbjct: 208 ENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKI----YAGK--GYGYVQFGTRAS 261
Query: 270 LQSALDAMNG 279
+ A+ M G
Sbjct: 262 AEDAIQRMQG 271
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
+GNL ++T L + F + G + +I +G+G+V G+ A++AI+ G
Sbjct: 218 IGNLDLNVTEEELKQAFVQFGDIVLVKIY------AGKGYGYVQFGTRASAEDAIQRMQG 271
Query: 177 SQIGGRTVKVNF-------PEVPRGGERAAMGPKLQNSYQGF 211
IG + +++++ +VP GG A M P ++Y G+
Sbjct: 272 KVIGQQVIQISWGSTLTARQDVP-GGWGAQMDPSQWSAYYGY 312
>gi|116311029|emb|CAH67960.1| OSIGBa0142I02-OSIGBa0101B20.3 [Oryza sativa Indica Group]
Length = 291
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYV N+P+S + + ++FA+ G V E++ + + GF FVTM + EEA A+
Sbjct: 81 KLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIKGKDGKKK-GFAFVTMATAEEAAAAVEK 139
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+ + GRT++V F + R G + HK+Y NL W + ++
Sbjct: 140 LNSLDVMGRTIRVEFSKSFRK--------PAPPPPPGTILERHKLYVSNLPWKARAPNMK 191
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + LSAKV+F+ +G+S G+GFV+F T E+ ++AL ++G E+ GRP+RL
Sbjct: 192 EFFS-KFNPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRW 248
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +LYV NLP+ + ++ E F++ + SA++V+D + +S G+GFV+ G+ EEA+ A
Sbjct: 172 ERHKLYVSNLPWKARAPNMKEFFSKFNPL-SAKVVFDSPSGKSAGYGFVSFGTKEEAEAA 230
Query: 171 IRLFDGSQIGGRTVKVNF 188
+ DG ++ GR V++ +
Sbjct: 231 LTELDGKELMGRPVRLRW 248
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
EEPK S EA ++V L +T+ L F + GTV + IV DR++ RS+G G+
Sbjct: 243 EEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGY 301
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSPH- 216
V S++ ++AI L G+ + G V V E ER + P N + V +PH
Sbjct: 302 VEFRSIDMVEKAISL-SGTVVMGLPVMVQLTE----SERNKLHPGDGNLNLPPGVSAPHG 356
Query: 217 --KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL
Sbjct: 357 AMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 416
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
+ M G E+ GR LR+N +E+
Sbjct: 417 EQMEGFELAGRTLRVNTVHEKG 438
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
EEPK S EA ++V L +T+ L F + GTV + IV DR++ RS+G G+
Sbjct: 243 EEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGY 301
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSPH- 216
V S++ ++AI L G+ + G V V E ER + P N + V +PH
Sbjct: 302 VEFRSIDMVEKAISL-SGTVVMGLPVMVQLTE----SERNKLHPGDGNLNLPPGVSAPHG 356
Query: 217 --KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL
Sbjct: 357 AMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 416
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
+ M G E+ GR LR+N +E+
Sbjct: 417 EQMEGFELAGRTLRVNTVHEKG 438
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 13/194 (6%)
Query: 109 SDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+DE R ++V L + + L E F +AG VA A+IV DRV++RS+G G+V S E
Sbjct: 224 NDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEES 283
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGW 225
A++L G ++ G + V E + + NS P H++Y GN+ +
Sbjct: 284 VAAALQL-TGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNSV------PFHRLYVGNIHF 336
Query: 226 GLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L+ F+ P G L + + GRSRG+GFV F A + + AL+ MNG ++ G
Sbjct: 337 SITETDLQHVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNGFDLAG 394
Query: 285 RPLRLNMANERAPP 298
RP+R+ + N++ P
Sbjct: 395 RPIRVGLGNDKFTP 408
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 18/198 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS++++ L+VGNL + + ++L E F G V A +V D+ + RSRGFG+V + + A
Sbjct: 291 ASEKSSTLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAA 350
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVP--------RGGERAAMGPKLQNSYQGFVDSPHK-- 217
++A +G+ + GR ++++F P R ERA G V SP
Sbjct: 351 EKAYNEKNGAFLQGREMRLDFASKPNADAPPSARAAERA--------RKHGDVISPESDT 402
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL + + F + S ++ ++ +GR +GF +VTF + ED + A + +
Sbjct: 403 LFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAFETL 462
Query: 278 NGVEVEGRPLRLNMANER 295
NG +++GRP+RL+ A R
Sbjct: 463 NGSDLDGRPVRLDYAKPR 480
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNLGWG+ L + FQ G++ A+V+ ++ +GRSRGFG+V FE + + A +
Sbjct: 298 LWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAAEKAYNEK 357
Query: 278 NGVEVEGRPLRLNMA---NERAPPVLPAAKETKTENSI 312
NG ++GR +RL+ A N APP AA+ + +
Sbjct: 358 NGAFLQGREMRLDFASKPNADAPPSARAAERARKHGDV 395
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P +++DE L++G+L Y M + L F+ G V S +++ ++ T++S G+GF+ S
Sbjct: 65 PPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFIS 124
Query: 164 VEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ F+G+ + GG+ ++N+ G +R DSP + I+
Sbjct: 125 RAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHD-------------DSPDYTIFV 171
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L ++ L + F+ + + AKV+ +R TGR++G+GFV F + A+ M G
Sbjct: 172 GDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQG 231
Query: 280 VEVEGRPLRLNMANER 295
V RP+R+ A+ +
Sbjct: 232 VLCSTRPMRIGPASNK 247
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 41/218 (18%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L ++ L EVF +V A++V DR T R++G+GFV E A+
Sbjct: 169 IFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTE 228
Query: 174 FDG---------------SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
G +G +T K ++ + P+GG + P N+ I
Sbjct: 229 MQGVLCSTRPMRIGPASNKNLGTQTSKASY-QNPQGGAQNENDPN--NT---------TI 276
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ + GFV F + AL +N
Sbjct: 277 FVGNLDPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLN 330
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTE-NSIDGS 315
G + G+ +RL+ PA K+T+ + N +GS
Sbjct: 331 GTLLGGQNVRLSWGRS------PANKQTQQDPNQWNGS 362
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 27/205 (13%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
P++ + AR ++V L + L + F G + ++ D T RS+G +V
Sbjct: 68 RPELTPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVEF 127
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVN-----------FPEVPRGGERAAMGPKLQNSYQG 210
VE A+ A+ L G+++ G +++ P VP+ P QN
Sbjct: 128 REVESAQLALGL-TGTRLLGVPIQIQQSHAEKNRMNAIPSVPK--------PTQQNR--- 175
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
P K+Y G+L + +T + L+ F+ + K+I + TGRS+G+GFVT+ ++D
Sbjct: 176 ---GPMKLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDDA 232
Query: 271 QSALDAMNGVEVEGRPLRLNMANER 295
+ ALD +NG E+ GRP+++N ER
Sbjct: 233 KKALDQLNGFELAGRPMKVNHVTER 257
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G + GF + IY NL + Q L+D
Sbjct: 159 NGMLLNDRKVFVGHFK-SRQKREAELGARAL----GFTN----IYVKNLHANVDEQRLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + S KV+ + G+SRGFGFV FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 210 LFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Query: 295 RA 296
RA
Sbjct: 269 RA 270
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T S L E+F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G ++ MG I+ NL + ++ L D
Sbjct: 73 NFEVIKGQPIRIMWSHRDPGLRKSGMG---------------NIFIKNLENSIDNKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R +
Sbjct: 118 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV 168
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 18/189 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL ++ L ++F++ G + S +++ D +SRGFGFV EEA++A+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+G ++ G+ + V + + ER + M + QN YQG +Y NL
Sbjct: 252 NGKEVSGQLLYVGRAQ--KRAERQSELKRRFEQMKQERQNRYQGV-----NLYVKNLDDS 304
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + L++ F + SAKV+ E + S+GFGFV F + E+ A+ MNG V +P
Sbjct: 305 INDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 363 LYVALAQRK 371
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + E +++E + + + LYV NL S+ L EVF+ G +
Sbjct: 266 AQKRAERQSELKRRFEQMKQERQNRY----QGVNLYVKNLDDSINDERLKEVFSTYGVIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + + S+GFGFV S EEA +A+ +G +G + + V + R ER A+
Sbjct: 322 SAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSYQ 209
L N Y+
Sbjct: 378 ---LTNQYR 383
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFST 121
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 101 EEEPKVAASDE------AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
EEEP A+ +A L+VGNL +++T L + F + G + SA I+ +R T RSR
Sbjct: 259 EEEPAAASKKSKTEEGASANLFVGNLSWNVTEEWLHQEFEQFGEL-SARIMTERDTGRSR 317
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE-VPRGGERAAMGPKLQNSYQGFVD 213
GFG+V + +A +A +I GR + +++ P ++ + QN + F D
Sbjct: 318 GFGYVEFTNAADAAKAYEAMKEHEIDGRKINLDYATGRPANKDQGGFKERAQNRARSFGD 377
Query: 214 --SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
SP ++ GNL + + + F Q +L ++ + +GR +GFG+V + + ++
Sbjct: 378 QTSPESDTLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDE 437
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERA 296
+ A + + G E++GRP+RL+ + RA
Sbjct: 438 ARKAYNELQGAEIDGRPIRLDFSTPRA 464
>gi|303284108|ref|XP_003061345.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
gi|226457696|gb|EEH54995.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
Length = 301
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAE------AGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
E R Y+GNL + T+ SL F + G+V +AE+ + RS+G+G V S
Sbjct: 115 EGCRCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVA-KQPGGRSKGWGLVDFESP 173
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A+ AI S + GR++ V + R G N+ + S +I NL
Sbjct: 174 AAAESAIATLHNSDLQGRSIIV---RLERAGGATKGPGGGANAGRPEASSGLQIVVRNLP 230
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W TS+ LR FQ ++ A + TGRS+G+G V FET E Q+A+ NGVE+E
Sbjct: 231 WTTTSEDLRQVFQQVGNVVKADAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELES 290
Query: 285 RPLRLNM 291
RP+++ +
Sbjct: 291 RPMQIKL 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A RLYVGNLP+S L +F+ G + +I R RSRG+G V S EA+ AI
Sbjct: 7 ANRLYVGNLPWSTDVDELRAIFSSCGAITHVDIPKGR-QGRSRGYGIVEYSSAAEAQAAI 65
Query: 172 RLFDGSQIGGRTVKV---NFPEVPRGGERAAMGPKLQNSYQGFVDSP----HKIYAGNLG 224
+G +G R + V N P + + S ++P + Y GNL
Sbjct: 66 AQLEGHTLGDRNLTVREDNAPTKTANSGGGSKSGGGRGSGNVMGETPAAEGCRCYIGNLA 125
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF-----ERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
W T++ L AF+ P S + ++ GRS+G+G V FE+ +SA+ ++
Sbjct: 126 WETTAESLVGAFEDYPHFSSVGSVVNAEVAKQPGGRSKGWGLVDFESPAAAESAIATLHN 185
Query: 280 VEVEGRPLRLNM 291
+++GR + + +
Sbjct: 186 SDLQGRSIIVRL 197
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G + GF + IY NL + Q L+D
Sbjct: 159 NGMLLNDRKVFVGHFK-SRQKREAELGARAL----GFTN----IYVKNLHANVDEQRLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + S KV+ + G+SRGFGFV FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 210 LFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Query: 295 RA 296
RA
Sbjct: 269 RA 270
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T S L E+F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G ++ MG I+ NL + ++ L D
Sbjct: 73 NFEVIKGQPIRIMWSHRDPGLRKSGMG---------------NIFIKNLENSIDNKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R +
Sbjct: 118 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV 168
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 18/189 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL ++ L ++F++ G + S +++ D +SRGFGFV EEA++A+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+G ++ G+ + V + + ER + M + QN YQG +Y NL
Sbjct: 252 NGKEVSGQLLYVGRAQ--KRAERQSELKRRFEQMKQERQNRYQGV-----NLYVKNLDDS 304
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + L++ F + SAKV+ E + S+GFGFV F + E+ A+ MNG V +P
Sbjct: 305 INDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 363 LYVALAQRK 371
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + E +++E + + + LYV NL S+ L EVF+ G +
Sbjct: 266 AQKRAERQSELKRRFEQMKQERQNRY----QGVNLYVKNLDDSINDERLKEVFSTYGVIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + + S+GFGFV S EEA +A+ +G +G + + V + R ER A+
Sbjct: 322 SAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSYQ 209
L N Y+
Sbjct: 378 ---LTNQYR 383
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFST 121
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 29/190 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + LA FA G V SA IV DR T RSRGFG+V V+ A +AI F
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIE-F 264
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI------------YAGN 222
+G ++ GR V+VNF N+ + D K+ + G+
Sbjct: 265 EGKELDGRAVRVNF----------------ANARKPDADKRAKVFNDKRSPPADTLWIGS 308
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + T + + F + S ++ +R TG ++GFG+VTF +AL+A+NG E
Sbjct: 309 LPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALNGSEF 368
Query: 283 EGRPLRLNMA 292
R +R++ A
Sbjct: 369 GSRRIRIDFA 378
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++G+LP+ T + E F E G V S + DR T ++GFG+VT G V +A A+
Sbjct: 304 LWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEAL 363
Query: 175 DGSQIGGRTVKVNF-PEVPRGGER 197
+GS+ G R ++++F P P G R
Sbjct: 364 NGSEFGSRRIRIDFAPPKPDNGRR 387
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 209 QGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
+G ++ + ++ G L W + + L F ++SA+++ +R T RSRGFG+V F
Sbjct: 197 EGEQEATNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFA--- 253
Query: 269 DLQSALDAMN--GVEVEGRPLRLNMANERAPPVLPAAK 304
D+ SA+ A+ G E++GR +R+N AN R P AK
Sbjct: 254 DVDSAIKAIEFEGKELDGRAVRVNFANARKPDADKRAK 291
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 88 EQEEEEEEEAVEEEEEPKV---------AASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
E+E ++ EE EP + A ++ L+VGNL +++ L F G
Sbjct: 200 EEEAPSKKRKAEEAAEPAIKKTKTVEEPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGE 259
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
+ I+ DR T R +GFG+V + +A +A ++ GR + V+F PR A
Sbjct: 260 IVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDF-STPRQKPDA 318
Query: 199 AMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
N Y +P + ++ GNL + T+ +++ F + + +R TG +
Sbjct: 319 GKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIK 378
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GFG+V F + E+ +ALDA+NG ++ GR +R++ A R
Sbjct: 379 GFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYAAPR 416
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
EEA R + + K E P G E ++N ++ GNL
Sbjct: 201 EEAPSKKRKAEEAAEPA-IKKTKTVEEPAGAE------GIKN-----------LFVGNLS 242
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W + LR F+G ++ ++I +R TGR +GFG+V F T+ D A M+ E++G
Sbjct: 243 WNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDG 302
Query: 285 RPLRLNMANERAPP 298
RPL ++ + R P
Sbjct: 303 RPLNVDFSTPRQKP 316
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P +++DE L++G+L Y M + L F+ G V S +++ ++ T++S G+GF+ S
Sbjct: 65 PPPSSADEVETLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFIS 124
Query: 164 VEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ F+G+ + GG+ ++N+ G +R DSP + I+
Sbjct: 125 RAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHD-------------DSPDYTIFV 171
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L ++ L + F+ + + AKV+ +R TGR++G+GFV F + A+ M G
Sbjct: 172 GDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQG 231
Query: 280 VEVEGRPLRLNMANER 295
V RP+R+ A+ +
Sbjct: 232 VLCSTRPMRIGPASNK 247
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 41/218 (18%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L ++ L EVF +V A++V DR T R++G+GFV E A+
Sbjct: 169 IFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTE 228
Query: 174 FDG---------------SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
G +G +T K ++ + P+GG + P N+ I
Sbjct: 229 MQGVLCSTRPMRIGPASNKNLGTQTSKASY-QNPQGGAQNENDPN--NT---------TI 276
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ + GFV F + AL +N
Sbjct: 277 FVGNLDPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLN 330
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTE-NSIDGS 315
G + G+ +RL+ PA K+T+ + N +GS
Sbjct: 331 GTLLGGQNVRLSWGRS------PANKQTQQDPNQWNGS 362
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER 197
++ + +IVYDR T R RGFGFV+ + + +A+ +GS I GR ++V EV +G
Sbjct: 28 SLVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRV---EVAKG--- 80
Query: 198 AAMGPKLQNSYQGF-VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
++G +N Q + +K++ +L W T + LRDAF + K++ +R TGRS
Sbjct: 81 -SLGKNSENVRQNRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRS 139
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
RG G V F T E++ +A+ MNG ++GR +
Sbjct: 140 RGMGIVKFSTREEMNNAISTMNGSTLDGRQI 170
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
++ +++V +L ++ T L + F++ G + +I+ DR T RSRG G V + EE
Sbjct: 96 NDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTREEMNN 155
Query: 170 AIRLFDGSQIGGRTVKV 186
AI +GS + GR + V
Sbjct: 156 AISTMNGSTLDGRQIAV 172
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 18/213 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++ + L++G+L M + + VFA++G SA+++ +++T +S G+GF+ S
Sbjct: 54 GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSV 113
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGER-AAMGPKLQNSYQGFVDSPHKIYAGNL 223
A+ ++ ++G+ + +T ++N+ + G +R GP H I+ G+L
Sbjct: 114 AERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPD------------HTIFVGDL 161
Query: 224 GWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L D F+ G + AKV+ +R TGRS+G+GFV F + A+ MNG
Sbjct: 162 APEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYC 221
Query: 283 EGRPLRLN-MANERAPPVLPAA-KETKTENSID 313
RP+R+ AN+ A P+ PA + T+ N+ D
Sbjct: 222 STRPMRIGPAANKNALPMQPAMYQNTQGANAGD 254
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEA-GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L++ F G+V A++V DR T RS+G+GFV E A+
Sbjct: 156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTE 215
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERA-AMGPKLQNSYQGFV---DSPHK--IYAGNLGWGL 227
+G R +++ P + A M P + + QG + P+ I+ G L +
Sbjct: 216 MNGQYCSTRPMRIG----PAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANV 271
Query: 228 TSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+ F GQ G LL K+ + GFV + + AL +NG ++ G+
Sbjct: 272 TDDELKSIF-GQFGELLHVKIP------PGKRCGFVQYANKASAEHALSVLNGTQLGGQS 324
Query: 287 LRLNMANERAP 297
+RL+ R+P
Sbjct: 325 IRLSWG--RSP 333
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L ++T L +F + G E+++ ++ R GFV + A+ A+ +
Sbjct: 262 IFVGGLDANVTDDELKSIFGQFG-----ELLHVKIPPGKR-CGFVQYANKASAEHALSVL 315
Query: 175 DGSQIGGRTVKVNFPEVP---------RGGERAAMGPKLQNSYQGFVDSP 215
+G+Q+GG+++++++ P GG P+ Q Y G+ P
Sbjct: 316 NGTQLGGQSIRLSWGRSPNKQSDQAQWNGGGYYGYPPQPQGGY-GYAAQP 364
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R+YVGNL +++ L + +AGTV A+++ + RS+G G V + EEA +AI
Sbjct: 179 RVYVGNLSWNVKWQELKDHMKKAGTVVHADVL-EEPNGRSKGCGLVEYATQEEAAKAIAE 237
Query: 174 FDGSQIGGRTVKVNFPEVPRGGE-----RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+ +++ GR + V P GG + A P+ S +G ++Y GNL W
Sbjct: 238 LNNTELEGRLIFVREDREPEGGSISKFAKRAAAPR--GSGEG-----RQLYVGNLPWETN 290
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
Q L+D F+ G + I E GRSRGFG + + A D A++ +NG+E+EGR +
Sbjct: 291 WQQLKDLFR-TVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIE 349
Query: 289 LNM 291
+ +
Sbjct: 350 VRL 352
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 78 TEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAG 137
T+ Q P EQ E+++ +E+ A+ R+YVGNL +S+ L + AG
Sbjct: 61 TQQQQAGPILEQRGEDDDVDMEQ-------AAAVGCRVYVGNLSWSIKWQDLKDHMQAAG 113
Query: 138 TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER 197
V A ++ RS+G G VT + E A+ AI + +++GGR + V E
Sbjct: 114 PVELATVL--ESNGRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFVR--EDREAQPV 169
Query: 198 AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
+A+ PK +GF ++Y GNL W + Q L+D + ++ A V+ E GRS+
Sbjct: 170 SAVKPK-----RGF-----RVYVGNLSWNVKWQELKDHMKKAGTVVHADVL-EEPNGRSK 218
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGR 285
G G V + T E+ A+ +N E+EGR
Sbjct: 219 GCGLVEYATQEEAAKAIAELNNTELEGR 246
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y GNL W + Q L+D Q G + + E GRS+G G VT+ET E Q+A+
Sbjct: 90 RVYVGNLSWSIKWQDLKDHMQA-AGPVELATVLE-SNGRSKGCGIVTYETEEAAQNAIAT 147
Query: 277 MNGVEVEGRPLRLNMANERAP 297
+N E+ GR + + E P
Sbjct: 148 LNDTELGGRKIFVREDREAQP 168
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 18/213 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++ + L++G+L M + + VFA++G SA+++ +++T +S G+GF+ S
Sbjct: 54 GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSV 113
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGER-AAMGPKLQNSYQGFVDSPHKIYAGNL 223
A+ ++ ++G+ + +T ++N+ + G +R GP H I+ G+L
Sbjct: 114 AERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPD------------HTIFVGDL 161
Query: 224 GWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L D F+ G + AKV+ +R TGRS+G+GFV F + A+ MNG
Sbjct: 162 APEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYC 221
Query: 283 EGRPLRLN-MANERAPPVLPAA-KETKTENSID 313
RP+R+ AN+ A P+ PA + T+ N+ D
Sbjct: 222 STRPMRIGPAANKNALPMQPAMYQNTQGANAGD 254
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEA-GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L++ F G+V A++V DR T RS+G+GFV E A+
Sbjct: 156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTE 215
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERA-AMGPKLQNSYQGFV---DSPHK--IYAGNLGWGL 227
+G R +++ P + A M P + + QG + P+ I+ G L +
Sbjct: 216 MNGQYCSTRPMRIG----PAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANV 271
Query: 228 TSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+ F GQ G LL K+ + GFV + + AL +NG ++ G+
Sbjct: 272 TDDELKSIF-GQFGELLHVKIP------PGKRCGFVQYANKASAEHALSVLNGTQLGGQS 324
Query: 287 LRLNMANERAP 297
+RL+ R+P
Sbjct: 325 IRLSWG--RSP 333
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L ++T L +F + G E+++ ++ R GFV + A+ A+ +
Sbjct: 262 IFVGGLDANVTDDELKSIFGQFG-----ELLHVKIPPGKR-CGFVQYANKASAEHALSVL 315
Query: 175 DGSQIGGRTVKVNFPEVP---------RGGERAAMGPKLQNSYQGFVDSP 215
+G+Q+GG+++++++ P GG P+ Q Y G+ P
Sbjct: 316 NGTQLGGQSIRLSWGRSPNKQSDQAQWNGGGYYGYPPQPQGGY-GYAAQP 364
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 101 EEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++ P+++ + AR ++V L + L + F G + ++ D T RS+G +V
Sbjct: 91 QKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYV 150
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
VE A+ A+ L G+++ G +++ + R + P L Q P K+Y
Sbjct: 151 EFREVESAQLALGL-TGTRLLGVPIQIQQSHAEKN--RVSATPSLPRPSQQN-KGPMKLY 206
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L + +T + L+ F+ + K+I + T RS+G+GFVT+ ++D + ALD +NG
Sbjct: 207 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNG 266
Query: 280 VEVEGRPLRLNMANERA 296
E+ GRP+++N ER+
Sbjct: 267 FELAGRPMKVNHVTERS 283
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 101 EEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++ P+++ + AR ++V L + L + F G + ++ D T RS+G +V
Sbjct: 91 QKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYV 150
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
VE A+ A+ L G+++ G +++ + R + P L Q P K+Y
Sbjct: 151 EFREVESAQLALGL-TGTRLLGVPIQIQQSHAEKN--RVSATPSLPRPSQQN-RGPMKLY 206
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L + +T + L+ F+ + K+I + T RS+G+GFVT+ ++D + ALD +NG
Sbjct: 207 IGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNG 266
Query: 280 VEVEGRPLRLNMANERA 296
E+ GRP+++N ER+
Sbjct: 267 FELAGRPMKVNHVTERS 283
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E E E V A D +Y+ N +M L E+FA+ G S +++ D RS+GFGF
Sbjct: 212 ERESELGVKAKD-YTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDC-GRSKGFGF 269
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-- 216
V+ S E+A+ A+ +G Q+ G+ + V R ++ +L+ ++ + H
Sbjct: 270 VSFQSHEDAQAAVDDMNGKQLNGKQIYVG-----RAQKKRERQTELKRHFEQIKQNQHIR 324
Query: 217 ----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+Y NL + + LR F + SAKV+ E GRS+GFGFV F +++D
Sbjct: 325 YQGVNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMME--NGRSKGFGFVCFSSSKDAAK 382
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A MNG V +PL +++A +
Sbjct: 383 ASREMNGKLVASKPLYVSLAQRK 405
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S+ + +L + F+ G + S +++ D + S+G+GFV + E A +AI
Sbjct: 135 VFVKNLEKSIDNKALYDTFSTFGRILSCKVISDE--NGSKGYGFVHFETQESAGKAIEKM 192
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + V V + R E + +G K ++ IY N G + Q L +
Sbjct: 193 NGMLLNNLKVFVGRFKSRRERE-SELGVKAKDYTN--------IYIKNFGENMDDQRLTE 243
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS KV+ + GRS+GFGFV+F++ ED Q+A+D MNG ++ G+ + + A +
Sbjct: 244 IFAKYGPTLSVKVMTDD-CGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQK 302
Query: 295 R 295
+
Sbjct: 303 K 303
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L + +T S L E F+ AG + S + D VT S G+ +V A+ +
Sbjct: 45 ASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLA 104
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G +++ + + G + +G ++ NL + ++ L
Sbjct: 105 TMNLDVIKGNPIRIMWSQRDPGQRKRGVG---------------NVFVKNLEKSIDNKAL 149
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
D F +LS KVI + S+G+GFV FET E A++ MNG+
Sbjct: 150 YDTFSTFGRILSCKVISDE--NGSKGYGFVHFETQESAGKAIEKMNGM 195
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T S G+ +V F+ + L M
Sbjct: 47 LYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLATM 106
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++G P+R+ M ++R P
Sbjct: 107 NLDVIKGNPIRI-MWSQRDP 125
>gi|320580860|gb|EFW95082.1| poly(A+) RNA-binding protein, putative [Ogataea parapolymorpha
DL-1]
Length = 405
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNLPY T L ++F E G V A++V R RSRG G V + + +EAI F
Sbjct: 71 IFVGNLPYHTTWYDLKDLFREVGEVVRADVVTSR--GRSRGMGTVEFANKDLVQEAISKF 128
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN----SYQGFVDSPHKIYAGNLGWGLTSQ 230
D + GR + V P E + +N S +G+ +++ GNL + + Q
Sbjct: 129 DRTMYEGREIFVREDLPPPEKENTGREERRRNAPPPSTEGY-----EVFIGNLPFSVRWQ 183
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+D F+ ++ A V E + GRS+GFG V FE +ED A+ NG +++GR + +
Sbjct: 184 DLKDLFKSCGPIIRADVR-EDHRGRSKGFGTVIFENSEDADRAIADFNGYDMDGRRIEVR 242
Query: 291 MANE 294
+ +
Sbjct: 243 LGKQ 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
E+E EE S E +++GNLP+S+ L ++F G + A++ D
Sbjct: 148 EKENTGREERRRNAPPPSTEGYEVFIGNLPFSVRWQDLKDLFKSCGPIIRADVREDH-RG 206
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV----NFPEVPRGGERAAMGPKLQNS 207
RS+GFG V + E+A AI F+G + GR ++V F + P+ G + +
Sbjct: 207 RSKGFGTVIFENSEDADRAIADFNGYDMDGRRIEVRLGKQFNKEPQ-GPTESRNSEFVAG 265
Query: 208 YQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
G + I+A NL W + L D F + A++ F+ R G V F+
Sbjct: 266 VVGQGEPNDTIFADNLPWETSETDLFDLFGSIASVKRAELQFDDLN-RPAGTAVVQFQEL 324
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMA 292
+ +A++ ++ E R L ++ A
Sbjct: 325 DGAIAAVNQLDNYEYGRRRLHVSFA 349
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+ I+ GNL + T L+D F+ ++ A V+ R GRSRG G V F + +Q A+
Sbjct: 69 NSIFVGNLPYHTTWYDLKDLFREVGEVVRADVVTSR--GRSRGMGTVEFANKDLVQEAIS 126
Query: 276 AMNGVEVEGRPLRLNMANERAPP 298
+ EGR + E PP
Sbjct: 127 KFDRTMYEGREI---FVREDLPP 146
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G + GF + IY NL + Q L+D
Sbjct: 159 NGMLLNDRKVFVGHFK-SRQKREAELGARAL----GFTN----IYVKNLHANVDEQRLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + S KV+ + G+SRGFGFV FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 210 LFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Query: 295 RA 296
RA
Sbjct: 269 RA 270
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T S L E+F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G ++ MG I+ NL + ++ L D
Sbjct: 73 NFEVIKGQPIRIMWSHRDPGLRKSGMG---------------NIFIKNLENSIDNKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R +
Sbjct: 118 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV 168
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL ++ L ++F++ G + S +++ D +SRGFGFV EEA++A+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+G ++ G+ + V + ER + M + QN YQG +Y NL
Sbjct: 252 NGKEVSGQLLYVG--RAQKRAERQSELKRRFEQMKQERQNRYQGV-----NLYVKNLDDS 304
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + L++ F + SAKV+ E + S+GFGFV F + E+ A+ MNG V +P
Sbjct: 305 INDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 363 LYVALAQRK 371
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + E +++E + + + LYV NL S+ L EVF+ G +
Sbjct: 266 AQKRAERQSELKRRFEQMKQERQNRY----QGVNLYVKNLDDSINDERLKEVFSTYGVIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + + S+GFGFV S EEA +A+ +G +G + + V + R ER A+
Sbjct: 322 SAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSYQ 209
L N Y+
Sbjct: 378 ---LTNQYR 383
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFST 121
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+ E EP +E +YVGNL + +T+ L A+ GT+ S IVYD SRGF +
Sbjct: 105 QREREPLPIKPNET--IYVGNLFFEVTAEDLKRDMAKFGTIYSVRIVYD-SRGMSRGFAY 161
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK- 217
V SVE A+ AI + S GR + VN+ R + P+ + S P K
Sbjct: 162 VQFDSVEAAEAAISEMNMSIYEGRRIVVNY------STRNSAAPRTRAS------EPTKT 209
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL + +T + L D F+ P + +V ++ TGR RGF F E ++A++ +
Sbjct: 210 LFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLDVESAKAAMEIL 269
Query: 278 NGVEVEGRPLRLNMA 292
GRPLRL+ +
Sbjct: 270 KEKAPYGRPLRLDYS 284
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAISTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R ER A +L+ F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRR--EREA---ELRARAMEFTN----IYVKNLQVDMDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LLS KV+ + G SRGFGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKLLSVKVMKDN-NGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
E E A + E +YV NL M L ++F++ G + S +++ D SRGFGFV
Sbjct: 178 EREAELRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDN-NGHSRGFGFV 236
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVD 213
EEA++A+ +G ++ GR + V + V R E +++ N YQG
Sbjct: 237 NFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGV-- 294
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
+Y NL + + LR F + SAKV+ E G S+GFGFV F + E+ A
Sbjct: 295 ---NLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKA 349
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
+ MNG + +PL + +A +
Sbjct: 350 VTEMNGRIIGTKPLYVALAQRK 371
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F AG + S + D T RS + ++ +A+ A+
Sbjct: 11 ASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDR 166
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS + ++ F+ D + ALD M
Sbjct: 13 LYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L+VG+L Y M + L F G V S +I+ ++ T S G+GFV S A++
Sbjct: 40 EEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEK 99
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ + ++N+ G R GP+ H I+ G+L +
Sbjct: 100 ILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPE------------HSIFVGDLAPDV 147
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + P + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 148 TDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRP 207
Query: 287 LRLNMA--------NERAPPVLPAAKET 306
+R++ A N+ P V P A T
Sbjct: 208 MRISAATPKKSLGPNQLNPKVSPVAVAT 235
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 103 EPKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
+P DE R ++V L + S L E F +AG V A+IV DRV+ RS+G G+V
Sbjct: 209 KPAEPTDDERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVE 268
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIY 219
E ++AI L G ++ G + E + + R G Q++ F H++Y
Sbjct: 269 FKEEESVQKAIALT-GQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGIPF----HRLY 323
Query: 220 AGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
GN+ + +T L++ F+ P G L + + GRS+G+GFV F + AL+ MN
Sbjct: 324 VGNIHFSITEDDLKNVFE--PFGELEFVQLQKEEAGRSKGYGFVQFIDPTQAKEALEKMN 381
Query: 279 GVEVEGRPLRLNMANERAPP 298
G E+ GRP+R+ + N++ P
Sbjct: 382 GFELAGRPIRVGLGNDKFTP 401
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K ++E A L+VG L +S+ L F G V SA ++ +R T +SRG+G+V S
Sbjct: 190 KPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSK 249
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP----HKIYA 220
A++A++ + G ++ GR + ++ G+ A P + Q F D P ++
Sbjct: 250 SAAEKALQEYQGKELDGRPINLDM----STGKPHASNPNTDRAKQ-FGDVPSAPSDTLFV 304
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL + L + F ++S ++ T + +GFG+V F + ++ ++AL+A+NG
Sbjct: 305 GNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGE 364
Query: 281 EVEGRPLRLNMANER 295
++GR RL+ + R
Sbjct: 365 YLDGRACRLDFSTPR 379
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+VGNL ++ SL F E GTV S I T + +GFG+V SV+EAK A+
Sbjct: 302 LFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEAL 361
Query: 175 DGSQIGGRTVKVNFPEVPRGGERA 198
+G + GR +++F PR A
Sbjct: 362 NGEYLDGRACRLDF-STPRDNSNA 384
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 20/212 (9%)
Query: 97 AVEEEEEPK----VAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
A E E PK V+++ E A+ L+VG+L +++ L F + G +A+ +V DR +
Sbjct: 281 ATEAEPTPKKVKTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESG 340
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNS 207
RS+GFG+V + E AK+A+ G I GRT+ V+F PE PR + ++
Sbjct: 341 RSKGFGYVEYTTNEAAKKALEEMKGKDIDGRTINVDFSAPRPENPR---------QDRSR 391
Query: 208 YQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
G SP ++ NL + Q ++ F+G ++ ++ + +G+ +GF ++ ++
Sbjct: 392 LYGDQKSPESETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYD 451
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+ + A++ MNG V GR +R + + R P
Sbjct: 452 RVDSARKAVEEMNGALVAGRAIRTDFSTPRDP 483
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 14/186 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ + LA+ FA+ G V SA + DR T +SRGFGFV + E A A+ L
Sbjct: 323 VFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGANAAVALN 382
Query: 175 DGSQIGGRTVKVNFPEV-PRGGERAAMGPKLQNSYQGFVDS---PHKI-YAGNLGWGLTS 229
+I GR V ++ P ER A + F DS P + + GN+ + +T
Sbjct: 383 GQKEIDGRAVNLDKTSAKPADPERRA---------KAFGDSTSAPSSVLFVGNVSFDMTE 433
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
GL + F + S ++ +R T R +G+G+V F E + A + G++V GR +RL
Sbjct: 434 DGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARGMDVGGRTIRL 493
Query: 290 NMANER 295
+ A R
Sbjct: 494 DYAQPR 499
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 213 DS---PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
DS ++ G L W + + L F ++SA+V +R TG+SRGFGFV F TAE
Sbjct: 315 DSQEDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEG 374
Query: 270 LQSALDAMNG-VEVEGRPLRLNMANERAPPVLP 301
+A+ A+NG E++GR + L+ + A P P
Sbjct: 375 ANAAV-ALNGQKEIDGRAVNLDKTS--AKPADP 404
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 30/203 (14%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +E L++G+L Y + S L++ FA G V S +I+ +++T + G+GFV S A
Sbjct: 5 AIEEVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASA 64
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ +R ++G+Q+ G +T ++N+ G H I+ G+L
Sbjct: 65 EAFLRTYNGAQMPGTEQTFRLNWASFGDSGPD------------------HSIFVGDLAP 106
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P + AKV+ + TGRS+G+GFV F A+ MNGV
Sbjct: 107 DVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCST 166
Query: 285 RPLRLNMA---------NERAPP 298
RP+R++ A ++ APP
Sbjct: 167 RPMRISAATPKKNASFQHQYAPP 189
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 42/190 (22%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V D T RS+G+GFV + A+
Sbjct: 99 IFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTE 158
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY-------------- 219
+G R +++ +A PK S+Q P +Y
Sbjct: 159 MNGVYCSTRPMRI-----------SAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAP 207
Query: 220 ----------AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
GNL +T + L+ F ++ K+ Y G+ G+G+V F T
Sbjct: 208 ENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKI----YAGK--GYGYVQFGTRVS 261
Query: 270 LQSALDAMNG 279
+ A+ M G
Sbjct: 262 AEDAIQRMQG 271
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
+GNL ++T L + F + G + +I +G+G+V G+ A++AI+ G
Sbjct: 218 IGNLDLNVTEEELKQTFMQFGDIVLVKIY------AGKGYGYVQFGTRVSAEDAIQRMQG 271
Query: 177 SQIGGRTVKVNFPEVPRGGERAA--MGPKLQNSYQGF 211
IG + +++++ G A M P ++Y G+
Sbjct: 272 KVIGQQVIQISW-----GSSMTARQMDPSQWSAYYGY 303
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
EP+ +++ EEE A ++ + S+E+ L+VG L +++ L F + TV +A
Sbjct: 225 EPK-KRKAEEEAPAFSKKAKANEDGSEESKTLFVGQLSWNVDEDWLRREFEDVATVENAR 283
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
+V+D +RS+G G+V + +A++A+ G++I GR + ++F + +
Sbjct: 284 VVWDNQRNRSKGIGYVDFATRADAEKALAEKQGAEIDGRPINLDFTTARQNNNNS----- 338
Query: 204 LQNSYQGFVDS----PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
Q+ + F DS ++ GNL + + L A + S ++ ++ TG +GF
Sbjct: 339 -QDRARKFGDSESPPSDTLFVGNLSFNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGF 397
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+VTF T ++ + A AMNG +V GR +R + + R
Sbjct: 398 AYVTFSTIDEAKKAHAAMNGQQVCGRSIRTDYSQPR 433
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
EE+E +++E + A DE ++ NLP + S L E F +AG V ++ DR + +
Sbjct: 150 EEQERRRKQKEAEEADRDERT-VFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRK 208
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV 212
S+GFG++ A+ +G+Q G+TV V + + AA + +
Sbjct: 209 SKGFGYIEYLDKSSVPLALHQLNGTQCKGQTVLVQITQAEKN-RAAAAAAAAAANAPPSL 267
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+P ++Y GNL L LR F+ + + + TGRS+GF FV +++ ED +
Sbjct: 268 SAPTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKK 327
Query: 273 ALDAMNGVEVEGRPLRLNMANE 294
AL NG+E+ GR L++ + ++
Sbjct: 328 ALQHCNGMELAGRQLKVGIVSD 349
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGNL + L VF G + + D T RS+GF FV S E+AK+A++
Sbjct: 272 RLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQH 331
Query: 174 FDGSQIGGRTVKVNFPEVP 192
+G ++ GR +KV P
Sbjct: 332 CNGMELAGRQLKVGIVSDP 350
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G V A+IV DR++ RS+G G+V S +
Sbjct: 180 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKSEDTV 239
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+A++L G ++ G + V E + + R Q++ F H++Y GN+ +
Sbjct: 240 TQALQLT-GQKLLGIPIIVQLTEAEKNRQVRTTEAAGTQSNSIPF----HRLYVGNIHFN 294
Query: 227 LTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T Q L+ F +P G L + + TGRSRG+GFV + A + AL+ MNG ++ GR
Sbjct: 295 VTEQDLQAVF--EPFGELEFVQLQKDDTGRSRGYGFVQYRDAGQAREALEKMNGFDLAGR 352
Query: 286 PLRLNMANERAPP 298
P+R+ + N++ P
Sbjct: 353 PIRVGLGNDKFTP 365
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+ +E L+VG+L Y M + L F G V S +I+ ++ T S G+GFV S A
Sbjct: 3 SHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAA 62
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++ ++ ++G+Q+ + ++N+ G R GP+ H I+ G+L
Sbjct: 63 EKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPE------------HSIFVGDLAP 110
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ + P + AKV+ + TGRS+G+GFV F + A+ MNGV
Sbjct: 111 DVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSS 170
Query: 285 RPLRLNMANER 295
RP+R++ A +
Sbjct: 171 RPMRISAATPK 181
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV G E A+
Sbjct: 103 IFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSE 162
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKL----------------QNSYQGF-VDS-P 215
+G R ++++ + A + PK+ Q S Q F VD+ P
Sbjct: 163 MNGVYCSSRPMRISAATPKKSLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDP 222
Query: 216 HK--IYAGNLGWGLTSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+ I+ G L + + LR+ F GQ G L+ K+ +G GFV F +
Sbjct: 223 NNTTIFVGGLDPAVGDEDLRNVF-GQFGELVYVKIP------AGKGCGFVQFTHRACAEE 275
Query: 273 ALDAMNGVEVEGRPLRLNMANERAP 297
AL ++ + + +RL+ R+P
Sbjct: 276 ALQRLHQTVIGTQAVRLSWG--RSP 298
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E A ++VG L +S+ L + F G V SA ++ +R TDRSRG+G+V + A+
Sbjct: 137 SGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAE 196
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 197 KAIQEMQGKEIDGRPINCDL------STSKPAGNNTNDRAKKFGDTPSEPSDTLFLGNLS 250
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F + ED + AL+++ G ++
Sbjct: 251 FNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDN 310
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 311 RPVRLDYSSPR 321
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 6/215 (2%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
+P++ + + E++E ++ KVA D + L+VGNL +++ + L F E G ++
Sbjct: 227 KPKSAKRKAEDDE-TPAAKKSKVADVDTSKGPNLFVGNLSWNVDENWLRSEFEEFGELSG 285
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG 201
++ DR T RS+GFG+V +A +A G+++ GR + V+F + A
Sbjct: 286 VRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAKQGAELDGRPLNVDFANARSNDNKPA-- 343
Query: 202 PKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
+ SY + P ++ GNL + T + + +AF ++ ++ +R TG +GFG
Sbjct: 344 DNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETGAPKGFG 403
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+VTF + ++ ++AL+AM G ++ RP+RL+ + R
Sbjct: 404 YVTFGSVDEAKAALEAMQGGYIKNRPIRLDYSQPR 438
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + LR F+ L +++ +R TGRS+GFG+V F A D A A
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKETKT 308
G E++GRPL ++ AN R+ PA K+
Sbjct: 319 QGAELDGRPLNVDFANARSNDNKPADNRRKS 349
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NLP + T +L ++FA G + S ++V R +GFV V A+ A+R
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASR-NSAGLAYGFVEFVDVSSAERAVRTL 87
Query: 175 DGSQIGGRTVKVNF------PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
DG G +KV + PE E P N+ ++ G+L +
Sbjct: 88 DGWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSNAGNA------HLFVGDLSPDVD 141
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L +F P L+ +V+++ TG+SRGFGFV+F + D ++ + AM G + GR +R
Sbjct: 142 DSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIR 201
Query: 289 LNMANER 295
+N AN++
Sbjct: 202 VNWANQK 208
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEA-ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
+Q E V E + S+ A L+VG+L + S L F+ ++ ++Y
Sbjct: 103 KQSMHPEAMTVTEPDRSAPTHSNAGNAHLFVGDLSPDVDDSMLYSSFSRLPSLVDVRVMY 162
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D T +SRGFGFV+ S +A+ I G +GGR ++VN+
Sbjct: 163 DAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIRVNW 204
>gi|255718453|ref|XP_002555507.1| KLTH0G10912p [Lachancea thermotolerans]
gi|238936891|emb|CAR25070.1| KLTH0G10912p [Lachancea thermotolerans CBS 6340]
Length = 436
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAAR---------LYVGNLPYSMTSSSLAEVFAEA 136
E Q + E+ + EEP V ++ A+R LYVGNL ++T L + F
Sbjct: 32 EVAQTPVQTPESSTKPEEPTVTPAN-ASRGGRETSDRILYVGNLDLAVTEEMLKQYFQVG 90
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
G++A+ +I+ D+ ++ + FV +A A + DG QI +K+N+
Sbjct: 91 GSIANVKILMDK-NNKQANYAFVEFHQPHDANVAFQTLDGKQIENHVIKINW-------- 141
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
A + +S F ++ G+L + + L F+ P + A V+++ TGRS
Sbjct: 142 --AFQSQQVSSEDTF-----NLFVGDLNVDVDDETLARTFKDIPTFIQAHVMWDMQTGRS 194
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RG+GFV+F Q A++ G V GR +R+N A++R
Sbjct: 195 RGYGFVSFGEQTQAQKAMEDNQGAVVNGRAIRINWASKR 233
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 11/219 (5%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
Q+ P +++ E E ++ + + AS+ L+VG+L +++ L F G +
Sbjct: 167 QEAPSKKRKAEAAAEPAVKKTKTEAPASEGIKNLFVGSLSWNIDEDWLRREFEGFGEITG 226
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP---EVPRGGERA 198
++ DR + RS+GFG+V S +A +A ++ GR + V+F E P RA
Sbjct: 227 CRVITDRESGRSKGFGYVEFASAADAAKAKAEMHEYELDGRGLNVDFSTPREKPDQSARA 286
Query: 199 AMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSR 257
N Y +P + ++ GNL + +++G+++ FQ + + +R TG +
Sbjct: 287 -------NKYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLK 339
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
GFG+V F T E+ +AL+A+NG EVEGR +R++ A RA
Sbjct: 340 GFGYVDFGTVEEATAALEALNGQEVEGRAIRIDYAAPRA 378
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G+L W + LR F+G + +VI +R +GRS+GFG+V F +A D A M
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEM 259
Query: 278 NGVEVEGRPLRLNMANERAPP 298
+ E++GR L ++ + R P
Sbjct: 260 HEYELDGRGLNVDFSTPREKP 280
>gi|452822390|gb|EME29410.1| RNA-binding protein [Galdieria sulphuraria]
Length = 106
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 63/83 (75%), Gaps = 4/83 (4%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGL----LSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+++ GNL W +S+GL+ AFQ G+ ++A V+ +RY+GRSRGFGFVTFE+ ED S
Sbjct: 6 RLFIGNLSWKTSSEGLKRAFQNAIGVEASVVNAHVVMDRYSGRSRGFGFVTFESPEDAAS 65
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A++ +NG E++GR +R+++A+ER
Sbjct: 66 AVNLLNGKELDGRAIRVDLAHER 88
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEA----GTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+A RL++GNL + +S L F A +V +A +V DR + RSRGFGFVT S E+
Sbjct: 3 QAVRLFIGNLSWKTSSEGLKRAFQNAIGVEASVVNAHVVMDRYSGRSRGFGFVTFESPED 62
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE 190
A A+ L +G ++ GR ++V+
Sbjct: 63 AASAVNLLNGKELDGRAIRVDLAH 86
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEA-------ARLYVGNLPYSMTSSSLAEVFAEA 136
E Q +++++ + +E +A DE L+VGNLP S+ S L E+F
Sbjct: 193 EKRKVQSDDQDKHLCKRQELSFSSAHDEGKLKEGNGTNLFVGNLPPSLASHKLIELFLPF 252
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
G + + +V D T S+G+GFV A EAI+ +G + GR ++V P G
Sbjct: 253 GRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIKHMNGRMVEGRMLEVRLAGAPSSGS 312
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
M K+Y NL L L D F + S KV+ + TG S
Sbjct: 313 TKEMDMS-------------KLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLS 359
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+G+GFV + + A+ +NG +EG+ + + +A
Sbjct: 360 KGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVA 395
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ ++LYV NLP + L ++F G V S +++ D T S+G+GFV + A A
Sbjct: 317 DMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHA 376
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ--GFVDSPHKIYAGNLGWGLT 228
I +G I G+ ++V V G ++ + +Q VD + +Y NL +
Sbjct: 377 IFQLNGHLIEGKKMEVRVAAVSSSGSNTSVQAISETDHQLTKEVDMSN-VYVQNLPLLMN 435
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L + F + SAKV + +G S+G+GFV F D A+ +NG VEGR +
Sbjct: 436 TDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKIL 495
Query: 289 LNMANERAPPVLP--AAKETKTENSIDGSEL 317
+ + PP P + +T ID S L
Sbjct: 496 VRV----RPPSSPVESHANNRTLKEIDMSNL 522
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K+ + A LYVG +P ++T L ++F G EIV + D G+G + +
Sbjct: 709 KLVKEIDMANLYVGRVPSAVTCEQLVQIFCLYG-----EIVQAKKFDA--GYGMIRYANA 761
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA--AMGPKLQNSYQGFVDSPHKIYAGN 222
A AI DG QIGG T+ V +P + A A P+ + +D + +Y G
Sbjct: 762 SSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVATFARTPQTPGNEHRQIDMTN-LYVGY 820
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L +T+ L + F + AKV+ +++TG S+GFGFV F A +A+ MNG +
Sbjct: 821 LPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFADAYSAATAITHMNGYPL 880
Query: 283 EGRPLRLNMA 292
+G L + A
Sbjct: 881 DGHMLAVRTA 890
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ + +YV NLP M + L +F G V SA++ D + S+G+GFV +A A
Sbjct: 421 DMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHA 480
Query: 171 IRLFDGSQIGGRT--VKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+ +G + GR V+V P P E A L+ +D + +Y N+ +
Sbjct: 481 VIELNGCLVEGRKILVRVRPPSSPV--ESHANNRTLKE-----IDMSN-LYVCNIPSSMN 532
Query: 229 SQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L + F P G ++ ++ E+ S+G+GFV F + A+ MNG +EG +
Sbjct: 533 KAKLVELF--LPFGRITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEGETI 590
Query: 288 RLNMA 292
+ +A
Sbjct: 591 SVRVA 595
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 36/235 (15%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
VE + + + LYV N+P SM + L E+F G + A +V ++ + S+G+G
Sbjct: 505 VESHANNRTLKEIDMSNLYVCNIPSSMNKAKLVELFLPFGRITHAMVV-EQSNNSSKGYG 563
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM----------GPKLQNS 207
FV A EA+ + +G+ I G T+ V + + P++ N
Sbjct: 564 FVKFADSHCAAEAVAMMNGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEINNC 623
Query: 208 YQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFET 266
++Y NL +++ L F P G + V++ Y+ FV +
Sbjct: 624 ---------RLYVTNLPQTMSADKLVSLF--MPFGQIDRVVMYAEYS-------FVLYAD 665
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDGSELLSSI 321
AL M+G +EG+ L + + LP A ++ S GS+L+ I
Sbjct: 666 INSAAKALKHMDGYLIEGKRLVV-----KGSEPLP-ANAAQSACSQSGSKLVKEI 714
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E ++VG+L Y M + L FA G V S +++ ++ T +S G+GFV S E A+
Sbjct: 25 TEENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAE 84
Query: 169 EAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ ++ ++G+ + + ++N+ G R+ G S H I+ G+L
Sbjct: 85 KVLQNYNGTAMPNTEQPFRLNWASFSMGERRSEAG------------SDHSIFVGDLSSD 132
Query: 227 LTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T L++ F + P + AKV+ + TGRS+G+GFV F + A+ MNG R
Sbjct: 133 VTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNR 192
Query: 286 PLRLNMANER 295
P+R+ +A R
Sbjct: 193 PMRVGVATPR 202
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE A L+VG L +++ L F G V A ++ +R T +SRG+G+V + + A+
Sbjct: 171 TDEPATLFVGRLSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDFDNKDSAE 230
Query: 169 EAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSP----HKIYA 220
+A+ G +I GR + ++ P + +RA F D+P ++
Sbjct: 231 KALVEMQGKEIDGRPINLDMSTGKPHASKSNDRAKQ----------FGDTPSAPSDTLFI 280
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
GNL + L + F ++S ++ T + +GFG+V F + ++ ++AL+A+NG
Sbjct: 281 GNLSFNAQRDNLFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGE 340
Query: 281 EVEGRPLRLNMANER 295
+EGR RL+ + R
Sbjct: 341 YIEGRACRLDFSAPR 355
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 18/209 (8%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E L++G+L M + + VF ++G SA+++ +++T +S G+GF+ + A+
Sbjct: 62 EVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAERV 121
Query: 171 IRLFDGSQIGG--RTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ +T ++N+ + G +R GP H I+ G+L +
Sbjct: 122 LQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPD------------HTIFVGDLAPEV 169
Query: 228 TSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L D F+ G + AKV+ +R TGRS+G+GFV F + A+ MNG RP
Sbjct: 170 TDYMLSDTFKNVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRP 229
Query: 287 LRLN-MANERAPPVLPAA-KETKTENSID 313
+R+ AN+ A P+ PA + T+ N+ D
Sbjct: 230 MRIGPAANKNALPMQPAMYQNTQGGNAGD 258
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEA-GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L++ F G+V A++V DR T RS+G+GFV E A+
Sbjct: 160 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTE 219
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERA-AMGPKLQNSYQG--FVDS-PHK--IYAGNLGWGL 227
+G R +++ P + A M P + + QG DS P+ I+ G L +
Sbjct: 220 MNGQYCSTRPMRIG----PAANKNALPMQPAMYQNTQGGNAGDSDPNNTTIFVGGLDANV 275
Query: 228 TSQGLRDAFQGQPG-LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L+ F GQ G LL K+ + GFV + + AL +NG ++ G+
Sbjct: 276 TDDELKSIF-GQFGELLHVKIP------PGKRCGFVQYANRATAEHALSVLNGTQLGGQS 328
Query: 287 LRLNMANERAPPVLP 301
+RL+ R+P P
Sbjct: 329 IRLSWG--RSPNKQP 341
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L ++T L +F + G E+++ ++ R GFV + A+ A+ +
Sbjct: 266 IFVGGLDANVTDDELKSIFGQFG-----ELLHVKIPPGKR-CGFVQYANRATAEHALSVL 319
Query: 175 DGSQIGGRTVKVNFPEVP---------RGGERAAMGPKLQNSYQ--GFVDSPHK 217
+G+Q+GG+++++++ P GG P+ Q Y+ G+ P++
Sbjct: 320 NGTQLGGQSIRLSWGRSPNKQPDQAQWNGGGYYGYPPQPQGGYEPYGYAAQPNQ 373
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 30/203 (14%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +E L++G+L Y + S L++ FA G V S +I+ +++T + G+GFV S A
Sbjct: 5 AIEEVRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASA 64
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+ +R ++G+Q+ G +T ++N+ G H I+ G+L
Sbjct: 65 EAFLRTYNGAQMPGTEQTFRLNWASFGDSGPD------------------HSIFVGDLAP 106
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P + AKV+ + TGRS+G+GFV F A+ MNGV
Sbjct: 107 DVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCST 166
Query: 285 RPLRLNMA---------NERAPP 298
RP+R++ A ++ APP
Sbjct: 167 RPMRISAATPKKNASFQHQYAPP 189
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 42/190 (22%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V D T RS+G+GFV + A+
Sbjct: 99 IFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTE 158
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY-------------- 219
+G R +++ +A PK S+Q P +Y
Sbjct: 159 MNGVYCSTRPMRI-----------SAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAP 207
Query: 220 ----------AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
GNL +T + L+ F ++ K+ Y G+ G+G+V F T
Sbjct: 208 ENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKI----YAGK--GYGYVQFGTRVS 261
Query: 270 LQSALDAMNG 279
+ A+ M G
Sbjct: 262 AEDAIQRMQG 271
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
+GNL ++T L + F + G + +I +G+G+V G+ A++AI+ G
Sbjct: 218 IGNLDLNVTEEELKQTFMQFGDIVLVKIY------AGKGYGYVQFGTRVSAEDAIQRMQG 271
Query: 177 SQIGGRTVKVNF-------PEVPRGGERAAMGPKLQNSYQGF 211
IG + +++++ +VP GG M P ++Y G+
Sbjct: 272 KVIGQQVIQISWGSSMTARQDVP-GGWGVQMDPSQWSAYYGY 312
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE L++G+L Y M + + FA G V S +++ ++ T + G+GF+ GS A+
Sbjct: 85 ADEVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAE 144
Query: 169 EAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-KIYAGNLGW 225
++ ++G+ + G + ++N+ G +R D+P I+ G+L
Sbjct: 145 RILQTYNGTPMPNGEQNFRLNWASFSGGDKRD--------------DTPDFTIFVGDLAA 190
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L+D F+ P + AKV+ +R TGR++G+GFV F + A+ MNG
Sbjct: 191 DVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCST 250
Query: 285 RPLRLNMANER 295
RP+R+ +A +
Sbjct: 251 RPMRIGLATNK 261
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L + F +V A++V DR+T R++G+GFV G E A+
Sbjct: 183 IFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTD 242
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMG---PK--LQNSY-QG-FVDSPHK--IYAGNLG 224
+G+ R +++ + A G PK QNS QG + P+ I+ GNL
Sbjct: 243 MNGAFCSTRPMRIGLAT----NKNAVTGQQYPKASYQNSQTQGENENDPNNTTIFVGNLD 298
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LR+ F LL K+ + GFV F + AL +NG + G
Sbjct: 299 SNVTDDNLRELFGRYGQLLHVKIP------AGKRCGFVQFADRSCAEEALRLLNGTSLSG 352
Query: 285 RPLRLNMANERAP 297
+ +RL+ R+P
Sbjct: 353 QSIRLSWG--RSP 363
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ S +L + F+ G + S ++ D SRGFGFV + E A++AI
Sbjct: 101 VFIKNLEDSIDSKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETNEAAQQAISTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R ER A +L F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSHR--EREA---ELGAQALAFTN----IYVKNLHVDMDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FE E+ Q A+D MNG EV G+ L + A +
Sbjct: 210 LFFEFGKMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQK 268
Query: 295 R 295
R
Sbjct: 269 R 269
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL M L ++F E G + S +++ D + SRGFGFV EEA++A+
Sbjct: 193 IYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDHM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERA--------AMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+G ++ G+ + V + GER M Q YQG +Y NL
Sbjct: 252 NGKEVSGQQLYVG--RAQKRGERQNELKRRFEQMKQDRQTRYQGV-----NLYVKNLDDS 304
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
++ + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V +P
Sbjct: 305 ISDEKLRTVFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKP 362
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 363 LYVALAQRK 371
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + + G ++ +G ++ NL + S+ L D
Sbjct: 73 NFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NVFIKNLEDSIDSKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
F +LS KV + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 118 TFSTFGNILSCKVACDEHG--SRGFGFVHFETNEAAQQAISTMNGMLLNDR 166
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFST 121
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
+++E E ++PK + E A ++VG L +S+ L F G V SA ++Y+R TDR
Sbjct: 176 DDDEEKSESKKPKTELAGEPATIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDR 235
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQNSYQGF 211
SRG+G+V A++AI+ G +I GR + + P G R K F
Sbjct: 236 SRGYGYVDFEDKSYAEKAIKEMHGKEIDGRPINCDMSTSKPAGAPRDDRAKK-------F 288
Query: 212 VDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
D P + ++ GNL + L + F ++S ++ T + +GFG+V + +
Sbjct: 289 GDVPSEPSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSI 348
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMA 292
ED A + + G + RP+RL+ +
Sbjct: 349 EDATKAFEGLQGEYINNRPVRLDYS 373
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P I+ G L W + + L+ F+ G++SA+V++ER T RSRG+G+V FE + A+
Sbjct: 195 PATIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYGYVDFEDKSYAEKAI 254
Query: 275 DAMNGVEVEGRPLRLNMANER 295
M+G E++GRP+ +M+ +
Sbjct: 255 KEMHGKEIDGRPINCDMSTSK 275
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A ++E L+VG L +S+ L + F G V A ++ +R T RSRG+G+V +
Sbjct: 118 KKAKTEEITTLFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNK 177
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNF----PEVP--RGGERAAMGPKLQNSYQGFVDSP--H 216
A++A+ G +I GR + V+ P P R +RA S G SP
Sbjct: 178 ASAEKALEEMQGKEIDGRPINVDMSNSKPAAPAARNNDRA--------SQYGDKRSPPSD 229
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ GNL + L + F + S ++ T + +GFG+V F + ++ AL+A
Sbjct: 230 TLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEA 289
Query: 277 MNGVEVEGRPLRLNMANERAP 297
+NG V+ RP+RL+ + R P
Sbjct: 290 LNGEYVDNRPIRLDYSTPRDP 310
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L+ F+ G++ A+V+ ER TGRSRG+G+V F+ + AL+ M
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAK 304
G E++GRP+ ++M+N + P PAA+
Sbjct: 188 QGKEIDGRPINVDMSNSK--PAAPAAR 212
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E A ++VG L +S+ L + F G V SA ++ +R TDRSRG+G+V + A+
Sbjct: 137 SGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAE 196
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLG 224
+AI+ G +I GR + + G + + F D+P + ++ GNL
Sbjct: 197 KAIQEMQGKEIDGRPINCDL------STSKPAGNNTNDRAKKFGDTPSEPSDTLFLGNLS 250
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + F ++S ++ T + +GFG+V F + ED + AL+++ G ++
Sbjct: 251 FNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDN 310
Query: 285 RPLRLNMANER 295
RP+RL+ ++ R
Sbjct: 311 RPVRLDYSSPR 321
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 17/196 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P ++DE L++G+L Y M + L F+ G V S +++ +++ ++S G+GF+ S
Sbjct: 63 PPPTSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFIS 122
Query: 164 VEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ ++G+ + GG+ ++N+ G +R DSP + I+
Sbjct: 123 RAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHD-------------DSPDYTIFV 169
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L ++ L + F+ + + AKV+ +R TGRS+G+GFV F + A+ M G
Sbjct: 170 GDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEMQG 229
Query: 280 VEVEGRPLRLNMANER 295
V RP+R+ A+ +
Sbjct: 230 VLCSTRPMRIGPASNK 245
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 41/218 (18%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L ++ L EVF +V A++V DR T RS+G+GFV E A+
Sbjct: 167 IFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTE 226
Query: 174 FDG---------------SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
G +G +T K ++ + P+GG + P I
Sbjct: 227 MQGVLCSTRPMRIGPASNKNLGTQTSKASY-QNPQGGAQNENDPNNT-----------TI 274
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ GNL +T + L+ F L+ K+ + GFV F + AL +N
Sbjct: 275 FVGNLDPNVTDEHLKQVFTQYGELVHVKIP------SGKRCGFVQFADRSSAEEALRVLN 328
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTE-NSIDGS 315
G + G+ +RL+ PA K+T+ + N +GS
Sbjct: 329 GTLLGGQNVRLSWGRS------PANKQTQQDPNQWNGS 360
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR--SRGFGFVTMGSVEE 166
++ A +YVGNL +T + L E+F G V S +I+ R + + +GFV
Sbjct: 14 TNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRV 73
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A++AI+ +G +I ++ N+ + A + P LQ + + + H ++ G+L
Sbjct: 74 AEQAIQDMNGRKIFNYEIRANWAQ-----PSANINPPLQMTKEDTTNHFH-VFVGDLAAE 127
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + L AF + A V+++ +G+SRGFGFV F D + A+ MNG + RP
Sbjct: 128 INDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRP 187
Query: 287 LRLNMANERAPPVLPA 302
+R N A ++ +PA
Sbjct: 188 IRCNWATQKGQTAMPA 203
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L + LA+ F+E GT++ A +++D ++ +SRGFGFV +A+ AI
Sbjct: 118 HVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIAT 177
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP----HKIYAGNLGWGLTS 229
+G +G R ++ N+ A P Q Y+ V IY GN+ ++
Sbjct: 178 MNGEWLGTRPIRCNWATQKGQTAMPAPQPGQQLPYEVVVQQTPAYVTSIYVGNIPLNVSQ 237
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L FQ + G + +V F+ RGF FV +T E+ +A+ + + + G +L
Sbjct: 238 NDLVQPFQ-RFGYVQ-EVKFQ----ADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKL 291
Query: 290 NMANERAPP 298
+ +R PP
Sbjct: 292 SWGKDRPPP 300
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
+ + E +A + +YV NL ++T L +F++ GTV+S ++ D + RSRGFG
Sbjct: 185 INKNERVAMAGNKGFTNVYVKNLIENITEDILHRLFSQYGTVSSVVVMRDGM-GRSRGFG 243
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ-GFVDSPH 216
FV E AK+A+ G Q+G +T+ V + + ER M L++ Y+ F+ +
Sbjct: 244 FVNFCHPENAKKAVDSLHGRQVGSKTLFVG--KALKRDERREM---LKHKYRDNFIAKSN 298
Query: 217 ----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+Y NL + LR+ F ++SAKV+ GRS+GFGFV F E+ +
Sbjct: 299 MRWSNLYVKNLSESMNDTTLREIFGRYGQIVSAKVM-RHENGRSKGFGFVCFSNREESKQ 357
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A +NG V+G+ L + +A +
Sbjct: 358 AKRYLNGFSVDGKLLVVRVAERK 380
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NL S+TSS L +F G + S ++V + +S+GFGFV + + A A
Sbjct: 112 LYVKNLDISITSSGLERMFNPFGVILSCKVVEE--NGQSKGFGFVQFETEQSAVTARSAL 169
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
GS + G+ K+ + ER AM +GF + +Y NL +T L
Sbjct: 170 HGSMVDGK--KLFVAKFINKNERVAMAGN-----KGFTN----VYVKNLIENITEDILHR 218
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F Q G +S+ V+ GRSRGFGFV F E+ + A+D+++G +V + L + A +
Sbjct: 219 LF-SQYGTVSSVVVMRDGMGRSRGFGFVNFCHPENAKKAVDSLHGRQVGSKTLFVGKALK 277
Query: 295 R 295
R
Sbjct: 278 R 278
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 92 EEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD 151
+ E +A+E + + AS LYVG+L +T L F+ V S + + VT
Sbjct: 5 KSETQALENHQHSSMFAS-----LYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTG 59
Query: 152 RSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
+S + ++ S A A+ + + + G+ +++ + + R GF
Sbjct: 60 KSLCYAYINFDSPFSASNAMARLNHTDLKGKAMRIMWSQRDLSYRRRT----------GF 109
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
+ +Y NL +TS GL F +LS KV+ E G+S+GFGFV FET +
Sbjct: 110 GN----LYVKNLDISITSSGLERMFNPFGVILSCKVVEE--NGQSKGFGFVQFETEQSAV 163
Query: 272 SALDAMNGVEVEGRPL 287
+A A++G V+G+ L
Sbjct: 164 TARSALHGSMVDGKKL 179
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 79 EDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
ED+ + +E +++ + + A + +A ++V L L E F+ G
Sbjct: 174 EDNYRSKRSRSKERNKDKEISPVRDDPDADTRDARTVFVMQLSQRAKERELKEFFSSVGK 233
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
V + +I+ DR + RS+G G+V + A+ L + ++ G + V P A
Sbjct: 234 VRTVKIITDRNSRRSKGVGYVEYDVADSVPLALGL-NNQKLLGVPIIVQ-PSHAEKNRSA 291
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
LQ G P ++Y G+L + +T LR F+ + + +++ + RS+G
Sbjct: 292 GQNVTLQKVNSG----PMRLYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKG 347
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+GF+TF AED + ALD +NG E+ GRP+++N ER
Sbjct: 348 YGFITFHDAEDAKRALDQLNGFELAGRPMKVNHVTER 384
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 16/212 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
EA ++V L +T+ L F + G V A IV DR++ RS+G G+V + S++
Sbjct: 247 EARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRISRRSKGIGYVELRSIDLV 306
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPR----GGERAAMGPKLQNSYQGFVDSPHKIYAGNL 223
+A+ L G+ + G + V E R GE + P + G + ++Y G+L
Sbjct: 307 TKALDL-SGTIVMGLPIMVQLTEAERNRVHAGENLNLPPGVSAPQGGAM----QLYVGSL 361
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ LT Q ++ F+ L + + TGRS+G+ FV ++ AED + AL+ M+G E+
Sbjct: 362 HFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDGFELA 421
Query: 284 GRPLRLNMANERAPPVLPAAKETKTENSIDGS 315
GR LR+N NE+ A + T T +S++ S
Sbjct: 422 GRTLRVNSVNEKG----VAVRNTTTIDSLEDS 449
>gi|325091401|gb|EGC44711.1| nucleic acid-binding protein [Ajellomyces capsulatus H88]
Length = 359
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
EP + ++ + E + E ++ +YVGNL + +T+ L A+ GT+ S
Sbjct: 122 EPYGRRSFQQTDRRNESQRERELLPIKPNETIYVGNLFFEVTAEDLKRDMAKFGTIYSVR 181
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
IVYD SRGF +V SVE A+ AI + S GR + VN+ R + P+
Sbjct: 182 IVYDS-RGMSRGFAYVQFDSVEAAEAAISEMNMSIYEGRRIVVNY------STRNSAAPR 234
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+ S P K ++ GNL + +T + L D F+ P + +V ++ TGR RGF
Sbjct: 235 TRAS------EPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 288
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F E ++A++ + GRPLRL+ +
Sbjct: 289 DFLDVESAKAAMEILKEKAPYGRPLRLDYS 318
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
IY GNL + +T++ L+ + S +++++ G SRGF +V F++ E ++A+ M
Sbjct: 153 IYVGNLFFEVTAEDLKRDMAKFGTIYSVRIVYDS-RGMSRGFAYVQFDSVEAAEAAISEM 211
Query: 278 NGVEVEGRPLRLNMANER-APPVLPAAKETKT 308
N EGR + +N + A P A++ TKT
Sbjct: 212 NMSIYEGRRIVVNYSTRNSAAPRTRASEPTKT 243
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 109 SDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
DE R ++V L + S L E F + G V A+IV DRV+ RS+G G+V E
Sbjct: 152 DDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVEFKEEES 211
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++AI+L G ++ G + E + + R G Q++ F H++Y GN+ +
Sbjct: 212 VQKAIQLT-GQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGIPF----HRLYVGNIHF 266
Query: 226 GLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P G L + + GRS+G+GFV F + AL+ MNG E+ G
Sbjct: 267 SITEDDLKNVFE--PFGELEFVQLQKEEAGRSKGYGFVQFIDPAQAKEALEKMNGFELAG 324
Query: 285 RPLRLNMANERAPP 298
RP+R+ + N++ P
Sbjct: 325 RPIRVGLGNDKFTP 338
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 94 GCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASA 153
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S H I+ G+L
Sbjct: 154 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDHSIFVGDLAA 201
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNGV
Sbjct: 202 DVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCST 261
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 262 RPIRIGPA 269
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+F+ + +V A+
Sbjct: 166 PNTDRPFKLNWASYSMGEKRSEVASDHS--IFVGDLAADVTDEMLLELFSSKYRSVKGAK 223
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G R +++ P PR +
Sbjct: 224 VIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIG-PATPRRSSGDSGSST 282
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + L S K+ + G FV
Sbjct: 283 PGHS-DG--DSSNRTVYVGGLDPNVSEDELRKAF-AKYDLASVKIPLGKQCG------FV 332
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 333 QFVSRTDAEEALQGLNGSLIGKQAVRLSWV--RSP 365
>gi|45384000|ref|NP_990596.1| nucleolin [Gallus gallus]
gi|128840|sp|P15771.1|NUCL_CHICK RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|63711|emb|CAA35060.1| unnamed protein product [Gallus gallus]
Length = 694
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++E K E+ L V NL Y+ + +L E+F +A ++ + R +G+ FV
Sbjct: 448 QQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATSIKMPQ----NNQGRPKGYAFV 503
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHK 217
+ E+AKEA+ + ++I GR +++ F P +G N+ GF
Sbjct: 504 EFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGN---------MNARGGFNQQSKT 554
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ L T + LR++F+G +SA+++ +R TG S+GFGFV F + ED ++A +AM
Sbjct: 555 LFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611
Query: 278 NGVEVEGRPLRLNMA 292
E++G + L+ A
Sbjct: 612 EDGEIDGNKVTLDFA 626
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 94 GCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASA 153
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S H I+ G+L
Sbjct: 154 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDHSIFVGDLAA 201
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNGV
Sbjct: 202 DVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCST 261
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 262 RPIRIGPA 269
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+F+ + +V A+
Sbjct: 166 PNTDRPFKLNWASYSMGEKRSEVASDHS--IFVGDLAADVTDEMLLELFSSKYRSVKGAK 223
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G R +++ P PR +
Sbjct: 224 VIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIG-PATPRRSSGDSGSST 282
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + L S K+ + G FV
Sbjct: 283 PGHS-DG--DSSNRTVYVGGLDPNVSEDELRKAF-AKYDLASVKIPLGKQCG------FV 332
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 333 QFVSRTDAEEALQGLNGSLIGKQAVRLSWV--RSP 365
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 8/212 (3%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
++ + E++E + ++ KV +S E L+VGNL +++ L F E G ++ IV D
Sbjct: 237 QKRKAEDDEELAAPKKTKVESS-EGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTD 295
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
R + RSRGFG+V + +A +A ++ GR + ++F AA + Q+
Sbjct: 296 RDSGRSRGFGYVEFVNAADAAKAHAAKKDVELDGRKLNIDFANAR---SNAAPRERAQSR 352
Query: 208 YQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Q F D SP ++ GN+ + + +AF +L ++ + +GR +GFG+V
Sbjct: 353 AQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQ 412
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F + ++ +SA +NG ++ GRP+RL+ + R
Sbjct: 413 FSSVDEARSAFQTLNGADLGGRPMRLDFSTPR 444
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRSRGFG+V F A D A A
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAK 322
Query: 278 NGVEVEGRPLRLNMANERA 296
VE++GR L ++ AN R+
Sbjct: 323 KDVELDGRKLNIDFANARS 341
>gi|240275573|gb|EER39087.1| nucleic acid-binding protein [Ajellomyces capsulatus H143]
Length = 332
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
EP + ++ + E + E ++ +YVGNL + +T+ L A+ GT+ S
Sbjct: 95 EPYGRRSFQQTDRRNESQRERELLPIKPNETIYVGNLFFEVTAEDLKRDMAKFGTIYSVR 154
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
IVYD SRGF +V SVE A+ AI + S GR + VN+ R + P+
Sbjct: 155 IVYD-SRGMSRGFAYVQFDSVEAAEAAISEMNMSIYEGRRIVVNY------STRNSAAPR 207
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+ S P K ++ GNL + +T + L D F+ P + +V ++ TGR RGF
Sbjct: 208 TRAS------EPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 261
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F E ++A++ + GRPLRL+ +
Sbjct: 262 DFLDVESAKAAMEILKEKAPYGRPLRLDYS 291
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
IY GNL + +T++ L+ + S +++++ G SRGF +V F++ E ++A+ M
Sbjct: 126 IYVGNLFFEVTAEDLKRDMAKFGTIYSVRIVYDS-RGMSRGFAYVQFDSVEAAEAAISEM 184
Query: 278 NGVEVEGRPLRLNMANER-APPVLPAAKETKT 308
N EGR + +N + A P A++ TKT
Sbjct: 185 NMSIYEGRRIVVNYSTRNSAAPRTRASEPTKT 216
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 79 EDSQDEPETEQEEEEEEEAVEE------EEEPKVAASDEAAR-LYVGNLPYSMTSSSLAE 131
+D +DE ++++ E EE PK+ + R ++V L + + L
Sbjct: 71 DDERDEYDSKKHRRSRSPVTRESRPPVREESPKLTEDERDRRTVFVQQLAARLRTRELIA 130
Query: 132 VFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV 191
F + G V A++V DRV+ RS+G G+V E +AI + G ++ G + V E
Sbjct: 131 FFEKVGPVRDAQVVKDRVSGRSKGVGYVEFRDEESVHKAINM-TGQRLLGIPIIVQLTEA 189
Query: 192 PRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
+ R A + +S D+P H++Y GN+ + LT LR F+ L ++ E
Sbjct: 190 EKN--RQAKAEAMLSSGGRQSDAPFHRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKE 247
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
TGRSRG+GFV + + AL+ MNG E+ GR +R+ + N++ P
Sbjct: 248 PDTGRSRGYGFV--QDPAQARDALEKMNGFELAGRAIRVGLGNDKFTP 293
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +E ++VG+L Y M + L F +G V + +++ +R T ++ G+GFV S A
Sbjct: 99 ACEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASA 158
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A++ F G + R K+N+ G +R+ V S H I+ G+L
Sbjct: 159 DKALQNFTGHAMPNTDRPFKLNWASYSMGEKRSE------------VVSDHSIFVGDLAA 206
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNGV
Sbjct: 207 DVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCST 266
Query: 285 RPLRLNMANER 295
RP+R+ A R
Sbjct: 267 RPIRIGPATPR 277
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E+FA + +V A+++ D T RSRG+GFV G + A+
Sbjct: 199 IFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTE 258
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQ 230
+G R +++ P PR G+ + P + DS ++ +Y G L ++
Sbjct: 259 MNGVYCSTRPIRIG-PATPRRTAGDSGSSTPGHSDG-----DSTNRTVYVGGLDPNVSED 312
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR +F + S K+ + + GFV + D + AL +NG + + +RL+
Sbjct: 313 ELRKSFAKYGDVASVKIP------QGKQCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLS 366
Query: 291 MANERAP 297
R+P
Sbjct: 367 WG--RSP 371
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVG L +++ L + FA+ G VAS +I + + GFV + +A+EA++
Sbjct: 300 VYVGGLDPNVSEDELRKSFAKYGDVASVKI------PQGKQCGFVQYVNRTDAEEALQGL 353
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+GS IG + V++++ P + R G + N Y G
Sbjct: 354 NGSVIGKQAVRLSWGRSPSHKQPRGDSGNRRNNMYYG 390
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL- 173
LYVG LP S+ +L E F+ +G V S +I+ D+ +GF + + V+EA A L
Sbjct: 46 LYVGGLPKSINEDALNEKFSASGPVFSVKILNDK---NKQGFNYAFVEFVDEAGAAAALQ 102
Query: 174 -FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
F+GS +K+N+ A N+ Q D + I+ G+L + + L
Sbjct: 103 EFNGSSFENSMLKINY----------AYQSSTFNATQNSDDPTYNIFVGDLSPEVDDESL 152
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F L A V+++ T RSRG+GFVTF D ++AL MNG + GR +R N A
Sbjct: 153 HKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWA 212
Query: 293 NER 295
+ +
Sbjct: 213 SHK 215
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+ D ++VG+L + SL + F+ ++ A +++D T RSRG+GFVT ++ +A
Sbjct: 131 SDDPTYNIFVGDLSPEVDDESLHKFFSAFESLKQAHVMWDMQTSRSRGYGFVTFANLADA 190
Query: 168 KEAIRLFDGSQIGGRTVKVNFP----EVPRGGERAAMGPKLQNSYQ--GFVDSP 215
+ A+ +G + GR ++ N+ + RG R + + YQ GF +SP
Sbjct: 191 ETALSTMNGKVLNGRAIRCNWASHKQQNSRGAPRQNNQRQFRPQYQRPGFNESP 244
>gi|225560420|gb|EEH08701.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus G186AR]
Length = 740
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 13/208 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +S+G+GFVT E+A +A+ F
Sbjct: 49 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 108
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMGPKLQ-NSYQGFVDSPHKIYAGNLGWG 226
+GS GR +K+ E PR GG+ ++ Q + P K+ NL W
Sbjct: 109 NGSDFDGRKLKIEVAE-PRHREIDENGGKSVSISHLKQVREIRKTQAQPPKLIIRNLPWS 167
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + G + VI +R T S GFGFV ++ + AL+A+NG EV+GR
Sbjct: 168 IAEPDQLSSLFRSFGKVKHAVIPKRGTKHS-GFGFVVLRGRKNAEKALNAVNGKEVDGRT 226
Query: 287 LRLNMANERAPPVLPAAKETKTENSIDG 314
L ++ A E++ + + T++ IDG
Sbjct: 227 LAVDWAVEKS---VWDEFQNHTDDVIDG 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ E +EE+ + ++EE E + AS +++ NLP++ T SL E F + G + A +V
Sbjct: 298 DLEGDEEDAGKKIDEEVEDERNAST----VFIRNLPFNATDDSLYEHFVQFGPLRYARVV 353
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIR 172
D TDR RG FV E+A +R
Sbjct: 354 VDAETDRPRGTAFVCFWKNEDAISCLR 380
>gi|449436976|ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449497014|ref|XP_004160289.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 31/246 (12%)
Query: 75 FQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA 134
FQ SQDE + + EE RL N+P+ T + +F
Sbjct: 76 FQFASTSQDEAVSSPSDTEEFSQT---------------RLLAQNVPWDSTPEDIRSLFE 120
Query: 135 EAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
+ GTV E+ +Y+++ R+RG FVTMGS EEA A+ + + GRT+++N+
Sbjct: 121 KYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNY----- 173
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERY 252
A + + + ++ NL + ++ L++ F G ++SA++IF
Sbjct: 174 ----AKLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNEN 229
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTEN-S 311
RS G+GFV F+T +D ++A+ G GR LR +A + LP+ ++ ++E+ S
Sbjct: 230 PRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLR--VARSKQFVKLPSEEKPQSEDAS 287
Query: 312 IDGSEL 317
DG EL
Sbjct: 288 TDGVEL 293
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D +++VG L +++ L F + G V +A + DR + RSRGFG+V S E A +
Sbjct: 202 DNTPQIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVK 261
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF----VDSPHKIYAGNLGW 225
A+ F G +I GR V+V+ VPR P + + F D + ++ GNL +
Sbjct: 262 AMDQFAGKEIDGRPVRVDL-SVPR-------APNPEKRAKSFGDQRSDPSNTLFIGNLSF 313
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + F + S +V +R TG +GFG+V+F + ++A+D G E++GR
Sbjct: 314 NTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGAAGSELDGR 373
Query: 286 PLRLNMA 292
+RL+ +
Sbjct: 374 VIRLDFS 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
+D+ +I+ G L W + L+ F+ + +A+V +R +GRSRGFG+V FE+ E
Sbjct: 201 LDNTPQIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAV 260
Query: 272 SALDAMNGVEVEGRPLRLNMANERAP 297
A+D G E++GRP+R++++ RAP
Sbjct: 261 KAMDQFAGKEIDGRPVRVDLSVPRAP 286
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 87 TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
+++E E +EE V +EE ++ +++ L +T + + F++ G V ++
Sbjct: 165 SDREREWDEEHVSQEER-------DSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLIS 217
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
DR + RS+G G+V AI+L G ++ G + V+ P + AA L
Sbjct: 218 DRNSRRSKGIGYVEFTDASAVTLAIKL-SGQKLLGVPIMVS-PTMAEKNRYAAAQAALVK 275
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
QG P K+Y G+L + +T LR F+ + S ++ ++ T RS+GFGFV F
Sbjct: 276 P-QG----PMKLYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFRE 330
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
A + A++ MNG E+ GRP+++N +ER
Sbjct: 331 AGAAKRAMEQMNGFELAGRPMKVNTVSER 359
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 43 GCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASA 102
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S H I+ G+L
Sbjct: 103 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDHSIFVGDLAA 150
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNGV
Sbjct: 151 DVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCST 210
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 211 RPIRIGPA 218
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+F+ + +V A+
Sbjct: 115 PNTDRPFKLNWASYSMGEKRSEVASDHS--IFVGDLAADVTDEMLLELFSSKYRSVKGAK 172
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G R +++ P PR +
Sbjct: 173 VIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIG-PATPRRSSGDSGSST 231
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + L S K+ + G FV
Sbjct: 232 PGHS-DG--DSSNRTVYVGGLDPNVSEDELRKAF-AKYDLASVKIPLGKQCG------FV 281
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 282 QFVSRTDAEEALQGLNGSLIGKQAVRLSWV--RSP 314
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 96 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASA 155
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S H I+ G+L
Sbjct: 156 EKALQNFTGHVMPNTDRAFKLNWASYSMGEKRSE------------VASDHSIFVGDLAA 203
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNGV
Sbjct: 204 DVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCST 263
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 264 RPIRIGPA 271
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+F+ + +V A+
Sbjct: 168 PNTDRAFKLNWASYSMGEKRSEVASDHS--IFVGDLAADVTDEMLLELFSSKYRSVKGAK 225
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G R +++ P PR +
Sbjct: 226 VIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIG-PATPRRSSGDSGSST 284
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF L S K+ + G FV
Sbjct: 285 PGHS-DG--DSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCG------FV 335
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 336 QFASRTDAEEALQGLNGSLIGKQAVRLSWG--RSP 368
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 104 PKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
P + D + R +YVG L +++ L + FA+ G +AS +I + GFV
Sbjct: 285 PGHSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQC------GFVQFA 338
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
S +A+EA++ +GS IG + V++++ P + R G + N Y G
Sbjct: 339 SRTDAEEALQGLNGSLIGKQAVRLSWGRSPSHKQSRGDSGNRRNNMYYG 387
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETYEAAQQAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R ERAA +L F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRR--ERAA---ELGARALEFTN----IYVKNLPADVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +GRSR FGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDS-SGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG++ S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETYEAAQQAINTMNGMLLNDR 166
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NLP + L ++F++ G + S +++ D + RSR FGFV EEA++A
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDS-SGRSRCFGFVNFEKHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + + + V R E +++ YQG +Y NL
Sbjct: 248 VVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LR F + SAKV+ E S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDGKLRKEFSPYGVITSAKVMTE--GSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEMLKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 87 TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
TE+ EA EE E AS+ A LYVG L ++T S L E F+ G+V S +
Sbjct: 26 TEETPATSTEAAEESNESSTQASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCR 85
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
D VT RS G+G+V S + A+ + ++I G ++ + + P L+
Sbjct: 86 DAVTKRSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMW---------SQRDPSLRR 136
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
S G I+ NL + ++ L D F +LS KV + G S+GFGFV +E+
Sbjct: 137 SGSG------NIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDE-NGNSKGFGFVHYES 189
Query: 267 AEDLQSALDAMNGVEVEGRPL 287
E Q+A++ +NG+ + GR +
Sbjct: 190 DEAAQAAIENINGMLLNGREI 210
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +++ NL ++ + +L + F+ G V S ++ D S+GFGFV S E A+ AI
Sbjct: 139 SGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDE-NGNSKGFGFVHYESDEAAQAAI 197
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL-----QNSYQGFVDSPHKIYAGNLGWG 226
+G + GR + V GP L ++ +Q + + ++ N
Sbjct: 198 ENINGMLLNGREIYV--------------GPHLAKKDRESRFQEMIKNYTNVFVKNFDTE 243
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T LR+ F+ + S + + G ++GFGFV F +D A++A+N E +G+P
Sbjct: 244 STEDELRELFESYGPITSIHLQVDS-EGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKP 302
Query: 287 L---RLNMANERA 296
L R NER
Sbjct: 303 LYVGRAQKKNERV 315
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 104 PKVAASDEAAR----------LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
P +A D +R ++V N T L E+F G + S + D +
Sbjct: 214 PHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQVDS-EGHN 272
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER---------AAMGPKL 204
+GFGFV ++A +A+ + + G+ + V + ER A KL
Sbjct: 273 KGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVG--RAQKKNERVHELTKKYEADRLEKL 330
Query: 205 QNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
Q YQ ++ NL + L + F+ + SAKV+ + G+SRGFGFV
Sbjct: 331 Q-KYQSV-----NLFIKNLDESIDDARLEEEFKPFGTITSAKVMLDE-NGKSRGFGFVCL 383
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
T E+ A+ MN V +PL + +A +A
Sbjct: 384 STPEEATKAISEMNQRMVANKPLYVALAQPKA 415
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G L +T L + F + S +V + T RS G+G+V F + + AL+ +
Sbjct: 54 LYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEEL 113
Query: 278 NGVEVEGRPLRLNMANERAP 297
N E++G RL M ++R P
Sbjct: 114 NYAEIKGVRCRL-MWSQRDP 132
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
++ + E++E + ++ KV +S E L+VGNL +++ L F E G ++ IV D
Sbjct: 235 QKRKAEDDEELAAPKKTKVESS-EGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTD 293
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
R + RSRGFG+V +A +A ++ GR + ++F AA + Q+
Sbjct: 294 RDSGRSRGFGYVEFVDAADAAKAHAAKKDVELDGRKLNIDFANAR---SNAAPRERAQSR 350
Query: 208 YQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
Q F D SP ++ GN+ + + +AF +L ++ + +GR +GFG+V
Sbjct: 351 AQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQ 410
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F + ++ +SA +NG ++ GRP+RL+ + R
Sbjct: 411 FSSVDEARSAFQTLNGADLGGRPMRLDFSTPR 442
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL W + + LR F+ L +++ +R +GRSRGFG+V F A D A A
Sbjct: 261 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAK 320
Query: 278 NGVEVEGRPLRLNMANERA 296
VE++GR L ++ AN R+
Sbjct: 321 KDVELDGRKLNIDFANARS 339
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR-VTDRSRGFGFVTMGSVEEAKEAI 171
A LYVGNL +T L E+FA AG V S +I+ DR + +GFV + A+ A+
Sbjct: 15 AHLYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETAL 74
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +G +I ++VN+ A G N+ Q + ++ G+L + +
Sbjct: 75 QTLNGRKIFDTEIRVNW---------AYQG----NNKQEDTTNHFHVFVGDLSPEVNDEI 121
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L AF G + A+V+++ TG+SRG+GF++F D + A+ MNG + R +R+N
Sbjct: 122 LSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNW 181
Query: 292 ANER 295
AN++
Sbjct: 182 ANQK 185
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 18/194 (9%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L + L++ F+ +++ A +++D T +SRG+GF++ +A++AI
Sbjct: 107 HVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAIST 166
Query: 174 FDGSQIGGRTVKVNFP--EVPRGGERAAMGPKLQNSYQG-------FVDSP---HKIYAG 221
+G +G R ++VN+ + G R N++ G F +P +Y G
Sbjct: 167 MNGEWLGSRAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIG 226
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL T L FQ + I E RGF FV ++ E+ A+ + G
Sbjct: 227 NLTPYTTQADLVPIFQ------AFGYIIEVRMQADRGFAFVKLDSHENASMAIVQLQGTL 280
Query: 282 VEGRPLRLNMANER 295
++GRP++ + +R
Sbjct: 281 IQGRPIKCSWGRDR 294
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
EEP+ S EA ++V L +T+ L F + G V + IV DR++ RS+G G+
Sbjct: 244 EEPREDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGAVMDSRIVTDRISRRSKGIGY 302
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR----GGERAAMGPKLQNSYQGFVDS 214
V ++E ++AI L G+ + G ++V E R G+ + P + + + G
Sbjct: 303 VEFRTIELVEKAIGL-SGTIVMGLPIQVQHTEAERNRTHAGDSLHLPPGVSSHHGGM--- 358
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++Y G+L + LT +R F+ L + + TGRS+G+ FV ++ ED + AL
Sbjct: 359 --QLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMAL 416
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
+ M G E+ GR LR+N +E+
Sbjct: 417 EQMEGFELAGRTLRVNTVHEKG 438
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L + L E FAE T+ S + DRVT +S +G+V S ++A A++
Sbjct: 12 ASLYVGDLHSEVVDHHLFEAFAEFKTMDSVRVCRDRVTMKSLCYGYVNFKSQQDAIRAMK 71
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L + S + G+ ++V + ++ G ++ NL + + GL
Sbjct: 72 LKNNSYLNGKVIRVMWSHPDPSARKSGRG---------------NVFVKNLAGSIDNAGL 116
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D FQ +LS+KV+ G+S+G+GFV FE+ E +A++ +NG V + + +
Sbjct: 117 HDLFQKYGNILSSKVVMSG-DGKSKGYGFVQFESEESANNAIEKLNGSTVGDKQIYVGKF 175
Query: 293 NERAPPVLPA 302
+ +LP
Sbjct: 176 VRKGDRILPG 185
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 13/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S+ ++ L ++F + G + S+++V +S+G+GFV S E A AI
Sbjct: 102 VFVKNLAGSIDNAGLHDLFQKYGNILSSKVVMSG-DGKSKGYGFVQFESEESANNAIEKL 160
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+GS +G + + V + R G+R G + + +Y NL +T L++
Sbjct: 161 NGSTVGDKQIYVG--KFVRKGDRILPGYDAKYT---------NLYIKNLDSDITEALLQE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F ++S VI + G S+GF FV +E +D + A++AMNG++ + L + A +
Sbjct: 210 KFSSFGKIISL-VISKDDNGLSKGFAFVNYENPDDARKAMEAMNGLKFGSKNLYVARAQK 268
Query: 295 RA 296
+A
Sbjct: 269 KA 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+ NL +T + L E F+ G + S I D S+GF FV + ++A++A+
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLVISKDD-NGLSKGFAFVNYENPDDARKAMEAM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY------QGFVDSPHKIYAGNLGWGLT 228
+G + G + + V R ++A L + Q +Y N+ +T
Sbjct: 252 NGLKFGSKNL-----YVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVT 306
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LRD F + S KV+ + G S+GFGFV F E+ A+ + NG +PL
Sbjct: 307 DKELRDLFSSCGTITSVKVMRDD-KGISKGFGFVCFSNPEEANKAVRSFNGCMFHRKPLY 365
Query: 289 LNMANER 295
+ +A +
Sbjct: 366 IAIAQRK 372
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E EQ + E +E+ K AS+ LYV N+ +T L ++F+ GT+
Sbjct: 266 AQKKAEREQILHRQFEEKRKEQILKYQASN----LYVKNIDDDVTDKELRDLFSSCGTIT 321
Query: 141 SAEIVYDRVTDR--SRGFGFVTMGSVEEAKEAIRLFDGS 177
S +++ D D+ S+GFGFV + EEA +A+R F+G
Sbjct: 322 SVKVMRD---DKGISKGFGFVCFSNPEEANKAVRSFNGC 357
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A+SDE +++G+L + M + L FA G V SA+++ ++ T +S G+GFV S
Sbjct: 94 ASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGT 153
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ ++G+ + + ++N+ G R++ S I+ G+L
Sbjct: 154 AEKVLQNYNGTMMPNTDQAFRLNWATFSAGERRSSDAT-----------SDLSIFVGDLA 202
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L+D F G+ + AKV+ + TGRS+G+GFV F + A+ MNGV
Sbjct: 203 IDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCS 262
Query: 284 GRPLRLNMA 292
RP+R+ +A
Sbjct: 263 SRPMRIGVA 271
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T + L + FA ++ A++V D T RS+G+GFV G E A+
Sbjct: 196 IFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTE 255
Query: 174 FDGSQIGGRTVKVNF--PEVPRG-------------GERAAMGPKLQNSY-QGFVDSPHK 217
+G R +++ P+ G G +A G Q S+ +G +++
Sbjct: 256 MNGVYCSSRPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNT-T 314
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
I+ G L + + LR F ++S K+ +G GFV F ++ + A+ +
Sbjct: 315 IFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPV------GKGCGFVQFADRKNAEEAIQGL 368
Query: 278 NGVEVEGRPLRLNMANERAP 297
NG + + +RL+ R+P
Sbjct: 369 NGTVIGKQTVRLSWG--RSP 386
>gi|346971381|gb|EGY14833.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 785
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
+PK A + L+V +LP TS SLA+ F++ V A +V D+ T SRGFGFVT+
Sbjct: 28 KPKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQATKESRGFGFVTLT 87
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPE---------VPRGGERAAMG--PKLQNSYQGF 211
E+A EA + GR + V+ E PR A +G K Q + +
Sbjct: 88 DAEDALEAKAKLNNELWEGRRITVDLAEARNRDQNSSAPRTATLAPVGKQKKSQAIEEAW 147
Query: 212 VDSPHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
V SP K+ NL W + T L+ FQ + A + GR RGFGFVT ++
Sbjct: 148 V-SP-KLIIRNLPWSIKTPAQLQALFQSYGKIKFADLPMN--NGRLRGFGFVTIRGEKNA 203
Query: 271 QSALDAMNGVEVEGRPLRLNMANER 295
++A+ AMNG ++GR + ++ A E+
Sbjct: 204 ENAIKAMNGKGIDGRTIAVDWAVEK 228
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 102 EEPKVA--ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
E+P+ A ++ + +++ NLP++ T L FA G V A +V DR TDR G GFV
Sbjct: 342 EQPETAKKTTNNDSTVFIRNLPFTTTDEQLKSHFAVFGPVRYARVVMDRATDRPAGTGFV 401
Query: 160 TMGSVEEAKEAIR 172
++K ++
Sbjct: 402 CFFDEADSKACVK 414
>gi|366992143|ref|XP_003675837.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
gi|342301702|emb|CCC69473.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
Length = 377
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL + T L + F++ G V +AE++ R RS+G G V + +A+EAIR +
Sbjct: 80 IFIGNLSFDATEEDLRDFFSQVGEVVNAEVMSYR--GRSKGMGTVEFTNPADAEEAIRQY 137
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPK-LQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G GR + V + P G + + Q Y+ FV NL + +T Q L+
Sbjct: 138 NGVPFMGRDIFVKQDQPPPGSRQEFKSSEPTQQGYEAFV--------VNLPYSITWQNLK 189
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
D F+ ++ A V + Y G SRGFG V + ED+ A+D+ NG E+EGR L +
Sbjct: 190 DIFRECGDVIRADVELD-YNGYSRGFGSVIYANEEDMFKAIDSFNGAELEGRILEV 244
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y NLP S T L ++F G +A AE+VYD T S G V S + A I
Sbjct: 301 VYCNNLPLSTTVPDLYDLFGSVGEIAMAELVYDE-TGTSTGAAVVEYASQDAADVCINKL 359
Query: 175 DGSQIGGRTVKVNFPEVP 192
+G GGR + + + P
Sbjct: 360 NGYNYGGRDLHITYASRP 377
>gi|326507746|dbj|BAJ86616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 18/167 (10%)
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
V ++RG FVTMGS EEA A++ + S + RT+KV+F + + P +N
Sbjct: 30 VPKKNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVEKNV- 88
Query: 209 QGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETA 267
++ GNL W + S+ LR+ F PG+ S +VIF T RS G+GFV+F +
Sbjct: 89 ---------VFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSK 139
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDG 314
E+ ++A+ NG E+ GR + + M E P K+ K+ +S +G
Sbjct: 140 EEAEAAISTFNGKELMGRSINV-MFKEDTP------KKNKSSDSEEG 179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 100 EEEEPKV-AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT-DRSRGFG 157
++++P V +A E ++VGNL + + S L E+FA V S E+++ T RS G+G
Sbjct: 73 KKKQPAVPSAPVEKNVVFVGNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYG 132
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
FV+ S EEA+ AI F+G ++ GR++ V F E
Sbjct: 133 FVSFSSKEEAEAAISTFNGKELMGRSINVMFKE 165
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +Y+ N M L E+F+ G S +++ D + RSRGFGFV G+ EEA++A
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAGNLG 224
+ +G ++ GR + V + + R E +++ N YQG +Y NL
Sbjct: 248 VSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
G+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DGIDDDRLRKEFLPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 66 RQFSASFDGFQVTEDSQDEPETEQEEEEEEEAVE---EEEEPKVAASDEAARLYVGNLPY 122
R S ++ FQ D++ +T E + + + +P + S +++ NL
Sbjct: 50 RSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSG-VGNVFIKNLDE 108
Query: 123 SMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGR 182
S+ + +L + F+ G + S ++V D SRG+GFV + E A AI+ +G + R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Query: 183 TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGL 242
V V + R E Y V +Y N G + + LR+ F
Sbjct: 167 KVFVGHFKSRREREL---------EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNT 217
Query: 243 LSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
LS KV+ + +GRSRGFGFV + E+ Q A+ MNG EV GR + + A +R
Sbjct: 218 LSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LY+G+L +T + L E F+ AG + S + D T RS + ++ +A+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------------NVFIKNLDESIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRG+GFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS + ++ F+ D + ALD M
Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPIRI-MWSQRDP 91
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E+ L V NL Y+ + +L E+F +A ++ + R +G+ FV + E+AKEA
Sbjct: 415 ESKTLIVNNLAYAASEEALQELFKKASSIKMPQ----NNQGRPKGYAFVEFPTTEDAKEA 470
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + ++I GR +++ F +G ++ M N GF ++ L T +
Sbjct: 471 LNSCNNTEIEGRAIRLEFSS--QGWQKGNM-----NVRGGFNQQSKTLFVRGLSEDTTEE 523
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR++F+G +SA+++ +R TG S+GFGFV F + ED ++A +AM E++G + L+
Sbjct: 524 TLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVILD 580
Query: 291 MA 292
A
Sbjct: 581 FA 582
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 49/198 (24%)
Query: 115 LYVGNL----PYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
++VGNL + + + E F + A D S+ FG+V S EE +A
Sbjct: 235 VFVGNLVSTKDFEELKTGIKEFFGKKNIEA-----LDVRIGASKRFGYVDFSSAEELDKA 289
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI------------ 218
++L +G ++ G VK+ E+A S I
Sbjct: 290 LQL-NGKKLMGLEVKL---------EKA--------------KSKETIKENKKERDARTL 325
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ NL + LT ++D F+ L +++ + G S+G ++ F+T + AL+
Sbjct: 326 FVKNLPYRLTEDEMKDVFE---NALEIRIVMNK-EGNSKGMAYIEFKTEAEANKALEEKQ 381
Query: 279 GVEVEGRPLRLNMANERA 296
G E++GR + ++ E++
Sbjct: 382 GTEIDGRAMVIDFTGEKS 399
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +Y+ N M L E+F+ G S +++ D + RSRGFGFV G+ EEA++A
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAGNLG 224
+ +G ++ GR + V + + R E +++ N YQG +Y NL
Sbjct: 248 VSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
G+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DGIDDDRLRKEFLPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 66 RQFSASFDGFQVTEDSQDEPETEQEEEEEEEAVE---EEEEPKVAASDEAARLYVGNLPY 122
R S ++ FQ D++ +T E + + + +P + S +++ NL
Sbjct: 50 RSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSG-VGNVFIKNLDE 108
Query: 123 SMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGR 182
S+ + +L + F+ G + S ++V D SRG+GFV + E A AI+ +G + R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Query: 183 TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGL 242
V V + R E Y V +Y N G + + LR+ F
Sbjct: 167 KVFVGHFKSRREREL---------EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNT 217
Query: 243 LSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
LS KV+ + +GRSRGFGFV + E+ Q A+ MNG EV GR + + A +R
Sbjct: 218 LSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LY+G+L +T + L E F+ AG + S + D T RS + ++ +A+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------------NVFIKNLDESIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRG+GFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS + ++ F+ D + ALD M
Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPIRI-MWSQRDP 91
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EPK S EA ++V L +T+ L F + GTV A IV DR++ RS+G G+
Sbjct: 223 DEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGY 281
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK- 217
V ++E ++AI L G+ + G + V E R A G N G V +PH
Sbjct: 282 VEFRTIELVEKAIGL-SGTVVMGLPIMVQLTEAERNKTHAGDGSI--NLPPG-VSAPHGA 337
Query: 218 -IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL
Sbjct: 338 ILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQ 397
Query: 277 MNGVEVEGRPLRLNMANERA 296
M G E+ GR LR+N +E+
Sbjct: 398 MEGFELAGRTLRVNTVHEKG 417
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EPK S EA ++V L +T+ L F + GTV A IV DR++ RS+G G+
Sbjct: 223 DEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGY 281
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK- 217
V ++E ++AI L G+ + G + V E R A G N G V +PH
Sbjct: 282 VEFRTIELVEKAIGL-SGTVVMGLPIMVQLTEAERNKTHAGDGSI--NLPPG-VSAPHGA 337
Query: 218 -IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL
Sbjct: 338 ILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQ 397
Query: 277 MNGVEVEGRPLRLNMANERA 296
M G E+ GR LR+N +E+
Sbjct: 398 MEGFELAGRTLRVNTVHEKG 417
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 8/215 (3%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
P +++ ++EEE ++ + +V + + L+VGNL +++ L F E G + A +
Sbjct: 165 PSKKRKADDEEETAAKKSKTEVEDTG-SKNLFVGNLSWNIDDEWLYREFEEFGEITGARV 223
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKL 204
+ DR + RS+GFG+V + +A A++ G+ I GR V+F PR + AA +
Sbjct: 224 ISDRESGRSKGFGYVEFANSADAAAALKAKKGALIDGREANVDF-STPR--DNAAPKDRA 280
Query: 205 QNSYQGFVDSPH----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
Q + D+ + ++ GN+ + L +AF +++ ++ + +G +GFG
Sbjct: 281 NARAQTYGDAKNPESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFG 340
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++TF + ED ++A++ M G +V GRP+RL+ A R
Sbjct: 341 YITFSSVEDAKNAMENMMGADVGGRPVRLDYATPR 375
>gi|348577751|ref|XP_003474647.1| PREDICTED: nucleolin-like isoform 2 [Cavia porcellus]
Length = 714
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ LY+ NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 486 SGESKTLYLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 541
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 542 EALNSCNKREIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEETT 588
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G G A+++ +R TG S+GFGFV F T ED ++A +AM E++G +
Sbjct: 589 EETLKESFDGSIG---ARIVTDRETGSSKGFGFVDFNTEEDAKAAKEAMEDGEIDGNKVT 645
Query: 289 LNMANER 295
L+ A +
Sbjct: 646 LDWAKPK 652
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 37/210 (17%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 383 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----LEIRLVSKDGKSKGIAY 437
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS--- 214
+ + +A++ G++I GR+V + + G K QN Y+G +S
Sbjct: 438 IEFKTEADAEKTFEEKQGTEIDGRSVSLYY-----------TGEKGQNQDYRGGKNSTWS 486
Query: 215 --PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAE 268
+Y NL + T + L++ F+ K F + G+S+G+ F+ F + E
Sbjct: 487 GESKTLYLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFE 538
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPP 298
D + AL++ N E+EGR +RL + R P
Sbjct: 539 DAKEALNSCNKREIEGRTIRLELQGPRGSP 568
>gi|348577749|ref|XP_003474646.1| PREDICTED: nucleolin-like isoform 1 [Cavia porcellus]
Length = 713
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ LY+ NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 485 SGESKTLYLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 540
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 541 EALNSCNKREIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEETT 587
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G G A+++ +R TG S+GFGFV F T ED ++A +AM E++G +
Sbjct: 588 EETLKESFDGSIG---ARIVTDRETGSSKGFGFVDFNTEEDAKAAKEAMEDGEIDGNKVT 644
Query: 289 LNMANER 295
L+ A +
Sbjct: 645 LDWAKPK 651
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 37/210 (17%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 382 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----LEIRLVSKDGKSKGIAY 436
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS--- 214
+ + +A++ G++I GR+V + + G K QN Y+G +S
Sbjct: 437 IEFKTEADAEKTFEEKQGTEIDGRSVSLYY-----------TGEKGQNQDYRGGKNSTWS 485
Query: 215 --PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAE 268
+Y NL + T + L++ F+ K F + G+S+G+ F+ F + E
Sbjct: 486 GESKTLYLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFE 537
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPP 298
D + AL++ N E+EGR +RL + R P
Sbjct: 538 DAKEALNSCNKREIEGRTIRLELQGPRGSP 567
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL ++ ++L + F G +A+ +++ D+ + + + FV +A A +
Sbjct: 37 LYVGNLDKTINEATLKQYFQVGGPIANVKVLVDKNNEEAN-YAFVEYRQPRDANVAFQTL 95
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG QI +K+N+ S Q D ++ G+L + + L
Sbjct: 96 DGKQIENNVIKINW---------------AFQSQQVSSDDTFNLFVGDLNVDVDDETLSS 140
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ P + A V+++ +GRSRG+GFV+F E+ Q A+DA G + GR +R+N A +
Sbjct: 141 TFKEFPTFIQAHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAK 200
Query: 295 R 295
R
Sbjct: 201 R 201
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A ++VG L +S+ L + F G V A ++Y+R TDRSRG+G+V A++A
Sbjct: 169 EPATIFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKA 228
Query: 171 IRLFDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGW 225
I+ G +I GR + V+ P GG A + F D P + ++ GNL +
Sbjct: 229 IQEMQGKEIDGRPINVDMSTSKPAGGNDRA---------KKFGDVPSEPSDTLFLGNLSF 279
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + F ++S ++ T + +GFG+V F ED + AL+ + G ++ R
Sbjct: 280 NADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNR 339
Query: 286 PLRLNMANER 295
+RL+ + R
Sbjct: 340 AVRLDYSTPR 349
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 13/178 (7%)
Query: 101 EEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
EE +A++D A R L+V L ++ TS +L F E G + ++YD+VT +SRG+GF+
Sbjct: 54 EEIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFI 113
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
T ++E ++A+R I GR N G +A P L S K+Y
Sbjct: 114 TFKNMESTQQALRA-PSKLIDGRLAVCNLACESLSGTSSA--PDL---------SLRKLY 161
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
G+L +TS+ L + F + V ++R T SRGFGFVT++TAE + A+D +
Sbjct: 162 IGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDL 219
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K++ L W TS+ LR AFQ + VI+++ TG+SRG+GF+TF+ E Q AL
Sbjct: 67 RKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFITFKNMESTQQALR 126
Query: 276 AMNGVEVEGRPLRLNMANE 294
A + + ++GR N+A E
Sbjct: 127 APSKL-IDGRLAVCNLACE 144
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVG+L ++++ + L E+F++ G V S + D +T RS G+ +V S ++A A+ L
Sbjct: 26 VYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALELL 85
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ +++ F + P L+ S I+ NL + ++ L D
Sbjct: 86 NFTPVNGKPIRIMF---------SHRDPSLRKS------GAANIFIKNLDKAIDNKALHD 130
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F G+LS KV + +G+S+G+GFV FE E QSA++ +NG+
Sbjct: 131 TFSAFGGILSCKVATDS-SGQSKGYGFVQFEKEESAQSAIEKVNGM 175
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
AA +++ NL ++ + +L + F+ G + S ++ D + +S+G+GFV E A+ AI
Sbjct: 111 AANIFIKNLDKAIDNKALHDTFSAFGGILSCKVATDS-SGQSKGYGFVQFEKEESAQSAI 169
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + + V V P V R + G V + +Y NLG T
Sbjct: 170 EKVNGMLLNDKQVFVG-PFVRR----------QERDLSGGVSKFNNVYVKNLGENTTDDE 218
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L+ F G G +S+ V+ G+S+ FGFV FE A+D A++A+NG
Sbjct: 219 LKKVF-GAYGPISSAVVMRDNEGKSKCFGFVNFELADDAAKAVEALNG 265
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL + T L +VF G ++SA ++ D +S+ FGFV ++A +A+
Sbjct: 205 VYVKNLGENTTDDELKKVFGAYGPISSAVVMRDN-EGKSKCFGFVNFELADDAAKAVEAL 263
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQN-------SYQGFVDSPHKIYAGNLGWG 226
+G + + V + ER A + K + YQG +Y NL
Sbjct: 264 NGKKQDEKEWYVG--RAQKKSEREAELRAKFEQERKSRIEKYQGV-----NLYLKNLDDA 316
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + LR+ F + S KV+ + G+SRG GFV F T E+ A+ MN V +P
Sbjct: 317 VDDEKLRELFAEYGTITSCKVMKDP-QGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKP 375
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 376 LYVALAQRK 384
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E E A E+E + LY+ NL ++ L E+FAE GT+ S +++
Sbjct: 279 QKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVM 338
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D +SRG GFV + EEA A+ + +G + + V
Sbjct: 339 KDP-QGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLYV 378
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L ++ L + F ++S +V + T RS G+ +V + +A+D AL+ +
Sbjct: 26 VYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALELL 85
Query: 278 NGVEVEGRPLRLNMANERAP 297
N V G+P+R+ M + R P
Sbjct: 86 NFTPVNGKPIRI-MFSHRDP 104
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
EEE A DE R ++V L + + L E F + G VA A+IV DR
Sbjct: 159 EEEHRAARNSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDR 218
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS- 207
V++RS+G G+V E A++L G ++ G V V E A +++NS
Sbjct: 219 VSNRSKGVGYVEFKGEESVAAALQL-TGQKLLGIPVIVQPTE-------AEKNRQVRNSE 270
Query: 208 YQGFVDSP--HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTF 264
G +S H++Y GN+ + +T L++ F+ P G L + + +GRSRG+GFV F
Sbjct: 271 SSGHPNSVPFHRLYVGNIHFSITETDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQF 328
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
A + AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 329 RDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTP 362
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL ++ +L + F G +A+ +++ D+ + + + FV +A A +
Sbjct: 65 LYVGNLDKAINEDTLKQYFQVGGPIANVKVLVDKNNEEAN-YAFVEYHQPHDANVAFQTL 123
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG QI G +K+N+ Q+ + D+ ++ G+L + + L
Sbjct: 124 DGKQIEGNVIKINW--------------AFQSQHVSSDDT-FNLFVGDLNVDVDDETLTG 168
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ P + A V+++ +GRSRG+GFV+F + Q A+++ G + GR +R+N A++
Sbjct: 169 TFKEFPSFIQAHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASK 228
Query: 295 RAP 297
R P
Sbjct: 229 REP 231
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++ D+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDK--HGSRGFGFVHFETHEAAQQAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R ERAA +L F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRR--ERAA---ELGARALEFTN----IYVKNLPADVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +GRSR FGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDN-SGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG++ S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV +++ SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVACDKHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDR 166
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NLP + L ++F++ G + S +++ D + RSR FGFV EEA++A
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDN-SGRSRCFGFVNFEKHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + + + V R E +++ YQG +Y NL
Sbjct: 248 VVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LR F + SAKV+ E S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTE--GSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEMLKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
++ A +YVGNL + T L EVF +AG V + + DRV++ +G+GFV + E+A
Sbjct: 5 NQDATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADY 64
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI++ + ++ G+ V+VN +A+ K D ++ GNL L
Sbjct: 65 AIKVLNMIKLHGKPVRVN---------KASQDKKSN-------DVGANLFVGNLDSELDE 108
Query: 230 QGLRDAFQGQPGLLSA-KVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L D F +++ K++ + +G SRGFGFV++++ E +A++AMNG + RP+
Sbjct: 109 KLLYDTFSAFGVVITTPKIMRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQFLCNRPIS 168
Query: 289 LNMANER 295
+ A ++
Sbjct: 169 VTFAYKK 175
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA-EIVYDRVTDRSRGFGFVTMGSVEE 166
++D A L+VGNL + L + F+ G V + +I+ D + SRGFGFV+ S E
Sbjct: 90 SNDVGANLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMRDPDSGNSRGFGFVSYDSFEA 149
Query: 167 AKEAIRLFDGSQIGGRTVKVNF 188
A AI +G + R + V F
Sbjct: 150 ADAAIEAMNGQFLCNRPISVTF 171
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 83 DEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
D PET + E + E+E + + ++V L + + L F + G V A
Sbjct: 158 DRPETSSKREATPQLTEDERDRRT--------VFVQQLAARLRTRDLKAFFEKVGPVTEA 209
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
+IV DR++ RS+G G+V + + +A++L G ++ G + V E + R
Sbjct: 210 QIVKDRISQRSKGVGYVEFKNEDSVTQALQLT-GQKLLGIPIIVQMTEAEK--NRQVRTT 266
Query: 203 KLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFG 260
+ +++ + P H++Y GN+ + +T Q L+ F+ P G L + + GRSRG+G
Sbjct: 267 ETTSAHPNSI--PFHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYG 322
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
FV + A + AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 323 FVQYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTP 360
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V + E
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
A++L G ++ G V V P E+ ++S H++Y GN+ + +
Sbjct: 249 AAALQL-TGQKLLGIPVIVQ----PTEAEKNRQARNSESSGHPNSIPFHRLYVGNIHFSI 303
Query: 228 TSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P G L + + +GRSRG+GFV F A + AL+ MNG ++ GRP
Sbjct: 304 TETDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMNGFDLAGRP 361
Query: 287 LRLNMANERAPP 298
+R+ + N++ P
Sbjct: 362 IRVGLGNDKFTP 373
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L FA G V S +++ ++++ G+GF+ S E A++
Sbjct: 14 EEVRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEK 73
Query: 170 AIRLFDGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G +R GP H I+ G+L +
Sbjct: 74 VLQAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPD------------HSIFVGDLAPDV 121
Query: 228 TSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNGV RP
Sbjct: 122 TDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRP 181
Query: 287 LRLNMA 292
+R++ A
Sbjct: 182 MRISAA 187
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++GNL ++T L ++ + G E++Y ++ +G GFV S A+EA++
Sbjct: 230 IFIGNLDPNVTEEELRQICVQFG-----ELIYVKIP-VGKGCGFVQYASRASAEEAVQRL 283
Query: 175 DGSQIGGRTVKVNFPEVP--RGGERAAMG----PKLQNSYQGFVDSPH 216
G+ IG + V++++ P + + AA G P ++Y + P+
Sbjct: 284 HGTVIGQQVVRLSWGRSPANKQDQSAAWGQQADPNQWSAYYSYGYDPY 331
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
gi|222856007|gb|EEE93554.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 27/232 (11%)
Query: 65 FRQFSASF-----DGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGN 119
FR F F D V S D+ TE + + EE+ EEE K RL+ N
Sbjct: 61 FRHFLLHFSSTTQDHPVVDSSSLDDVVTEYQSKAEEK---EEEFSKT-------RLFASN 110
Query: 120 LPYSMTSSSLAEVFAEAGTVASAEI-VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQ 178
+P++ T+ + +F + GTV E+ +Y ++ R+RG FVTMGS EEA A+ + +
Sbjct: 111 VPWNCTAEDIRALFQKFGTVVDVELSMYSKI--RNRGLAFVTMGSPEEAVAALNNLESYE 168
Query: 179 IGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQG 238
GRT+K+N+ + + PK ++ FV NL + S+ L++ F
Sbjct: 169 FEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFV--------ANLPFEAKSKDLKEFFIA 220
Query: 239 Q-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ ++SA++IF R G+GFV F+T ++ A+ + E GR LR+
Sbjct: 221 EGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLRV 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG-RSRGFGFVTFETAEDLQS 272
S +++A N+ W T++ +R FQ ++ ++ Y+ R+RG FVT + E+ +
Sbjct: 102 SKTRLFASNVPWNCTAEDIRALFQKFGTVVDVEL--SMYSKIRNRGLAFVTMGSPEEAVA 159
Query: 273 ALDAMNGVEVEGRPLRLNMA 292
AL+ + E EGR L++N A
Sbjct: 160 ALNNLESYEFEGRTLKMNYA 179
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+VG+L Y M S L +F+ G + SA+I+ ++ + G+GFV S A+ + F
Sbjct: 22 LWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAERVLTAF 81
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G+Q+ + ++N+ G R GP+ + I+ G+L +T L
Sbjct: 82 TGTQMPQTEQLFRLNWAYFGIGERRPEGGPE------------NSIFVGDLAPDVTDYML 129
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
++ F+ + P + AKV+ + TGRS+G+GFV F + A+ MNG+ RP+R+N
Sbjct: 130 QETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSSRPMRINA 189
Query: 292 ANERAP--PVLPAAKETKT 308
A + P PA ++ T
Sbjct: 190 ATPKKALIPSAPAPQKVTT 208
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV E A+
Sbjct: 115 IFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSE 174
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPK---------LQNSYQGFVDSPHKIYAGNLG 224
+G R +++N + +A P+ LQN + I+ G L
Sbjct: 175 MNGIYCSSRPMRINAATPKKALIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLD 234
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
++ + L+ F L+ K+ +G GFV F + AL ++G +
Sbjct: 235 PAVSEEELQKTFGEFGELVYVKI------PPGKGCGFVQFTHRSCAEEALGKLHGTMIRQ 288
Query: 285 RPLRLNM---ANERAP 297
+ +RL+ AN++ P
Sbjct: 289 QAIRLSWGRTANKQYP 304
>gi|169773975|ref|XP_001821456.1| ribosome biogenesis (Nop4) [Aspergillus oryzae RIB40]
gi|83769317|dbj|BAE59454.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869076|gb|EIT78281.1| nucleolar protein fibrillarin NOP77 [Aspergillus oryzae 3.042]
Length = 726
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 35/236 (14%)
Query: 85 PETEQEEEEEEEAVEEEEEPKV---AASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVA 140
PE EE E A++ + V + SD+ R L+V +LP S+T+ L E F+++ +
Sbjct: 13 PEGRGNSEEVEAAMDTAKNDTVQEESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIK 72
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR------- 193
A +V D T +S+G+GFVT V++AK A+ F+GS G+ +KV++ + PR
Sbjct: 73 HALVVNDSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYAQ-PRHRTVDEN 131
Query: 194 GGE----RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAK--- 246
G+ AA+ K Q + P K+ NL W + +P L+
Sbjct: 132 AGKSVPSSAALEAKKQREQERAATQPPKLIVRNLPWSIK----------EPDDLAVHFRS 181
Query: 247 ------VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
V + + GFGFV ++ + AL+A+NG EV+GR L ++ A ++A
Sbjct: 182 FGKIKYVNLPKKGNKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAVDWAVDKA 237
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
AA +++ NLP++ T +L E F + G + A IV D T+R RG GFV VE+A +
Sbjct: 312 AATVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKVEDAAACV 371
Query: 172 R 172
R
Sbjct: 372 R 372
>gi|238492008|ref|XP_002377241.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
gi|220697654|gb|EED53995.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
Length = 729
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 35/236 (14%)
Query: 85 PETEQEEEEEEEAVEEEEEPKV---AASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVA 140
PE EE E A++ + V + SD+ R L+V +LP S+T+ L E F+++ +
Sbjct: 13 PEGRGNSEEVEAAMDTAKNDTVQEESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIK 72
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR------- 193
A +V D T +S+G+GFVT V++AK A+ F+GS G+ +KV++ + PR
Sbjct: 73 HALVVNDSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYAQ-PRHRTVDEN 131
Query: 194 GGE----RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAK--- 246
G+ AA+ K Q + P K+ NL W + +P L+
Sbjct: 132 AGKSVPSSAALEAKKQREQERAATQPPKLIVRNLPWSIK----------EPDDLAVHFRS 181
Query: 247 ------VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
V + + GFGFV ++ + AL+A+NG EV+GR L ++ A ++A
Sbjct: 182 FGKIKYVNLPKKGNKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAVDWAVDKA 237
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
AA +++ NLP++ T +L E F + G + A IV D T+R RG GFV VE+A +
Sbjct: 315 AATVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKVEDAAACV 374
Query: 172 R 172
R
Sbjct: 375 R 375
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--NHGSRGFGFVHFETHEAAQQAIVTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARAME----FTN----IYVKNLHVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 14/195 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL + L ++F++ G + S +++ D + SRGFGFV EE
Sbjct: 185 ARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYA 220
A++A+ +G ++ GR + V + V R E +++ YQG +Y
Sbjct: 244 AQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGV-----NLYV 298
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG
Sbjct: 299 KNLDDSIDDEKLRREFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 281 EVEGRPLRLNMANER 295
V +PL + +A +
Sbjct: 357 IVGTKPLYVALAQRK 371
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIRGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDNHG--SRGFGFVHFETHEAAQQAIVTMNGMLLNDR 166
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N + G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIRGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 83 DEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
++P+ +++ EE+ E V ++ + V +A L+VGNL +++ L F E G +A
Sbjct: 209 EKPQKKRKAEEDAEPVAKKAKVDVPEG-ASANLFVGNLSWNVDEEWLRSEFEEFGELAGT 267
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
IV DR + RSRGFG+V +VE+A +A +++ GR + +++ G A
Sbjct: 268 RIVTDRESGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGN-ANPRE 326
Query: 203 KLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
+ N + F D SP ++ GN+ + +++ F + ++ + +GR +G
Sbjct: 327 RADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKG 386
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
FG+V F + ++ ++AL+A +G ++ GR +RL+ + R P
Sbjct: 387 FGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPRQP 425
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 86 ETEQEEEEEEEAVE------EEEEPKVAASDEA---ARLYVGNLPYSMTSSSLAEVFAEA 136
E +++ +EEE + EE K A +DE A ++GNLP+S ++ + F
Sbjct: 144 ENKRKRDEEENGDDSSTGDAEESNTKKAKTDETPSNANFFIGNLPWSAEEDTVKQFFESQ 203
Query: 137 GT--VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP-EVPR 193
G V + ++ DR T R +GFG++ + + +A+ +G+ GR +KV+ E P
Sbjct: 204 GVSAVYAVRLITDRDTGRKKGFGYIETSASD--VDAVLALNGADFEGRELKVDKANERPA 261
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
+R P+ G + ++ GNL + T + A + + + +++++R T
Sbjct: 262 NADRDTK-PRDAPRQSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRET 320
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
R RGFG+ FE A+ A+ A V+V+GR +R++ A R+
Sbjct: 321 QRPRGFGYCEFEDADTANKAIAASGTVDVDGRQIRIDTATARS 363
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 23/119 (19%)
Query: 218 IYAGNLGWGLTSQGLRDAF--QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+ GNL W ++ F QG + + ++I +R TGR +GFG++ +A D+ + L
Sbjct: 182 FFIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIE-TSASDVDAVL- 239
Query: 276 AMNGVEVEGRPLRLNMA------------NERAPPVLPAAKETKTENSIDGSELLSSIS 322
A+NG + EGR L+++ A AP E + DG+ L ++S
Sbjct: 240 ALNGADFEGRELKVDKANERPANADRDTKPRDAP-------RQSGEAATDGNVFLGNLS 291
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RSRG +V V + A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L+ F G V S +I+ +++T + G+GFV S A+
Sbjct: 11 EEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAER 70
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ +T ++N+ G R P+ H I+ G+L +
Sbjct: 71 VLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPE------------HSIFVGDLAPDV 118
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + T RS+G+GFV F + A+ MNGV RP
Sbjct: 119 TDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRP 178
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 179 MRISAATPK 187
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL +++ L + + G + S +I +GFGFV G+ A+EAI+
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKI------QPGKGFGFVQFGTRASAEEAIQKM 282
Query: 175 DGSQIGGRTVKVNF-------PEVPRGGERAAMGPKLQNSYQGF 211
G IG + V++++ ++P GG M P ++Y G+
Sbjct: 283 QGKMIGQQVVRISWGRTLTARQDLP-GGWGPQMDPNQWSAYYGY 325
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 23/195 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V D T RS+G+GFV E A+
Sbjct: 109 IFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTE 168
Query: 174 FDGSQIGGRTVKVN--FPEVPRGG--------------ERAAMGPKLQNSYQGFVDSPHK 217
+G R ++++ P+ G A P +Q + +
Sbjct: 169 MNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTT 228
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
I+ GNL ++ + L+ ++S K+ +GFGFV F T + A+ M
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKI------QPGKGFGFVQFGTRASAEEAIQKM 282
Query: 278 NGVEVEGRPLRLNMA 292
G + + +R++
Sbjct: 283 QGKMIGQQVVRISWG 297
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G+L + + L F ++S K+I + TG+ G+GFV F + + L
Sbjct: 16 LWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTY 75
Query: 278 NGVEVEG--RPLRLNMAN----ERAPPVLP 301
NG ++ + RLN A+ ER P P
Sbjct: 76 NGTQMPATDQTFRLNWASFGIGERRPDAAP 105
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + L+ F G V S +I+ +++T + G+GFV S A+
Sbjct: 11 EEVRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAER 70
Query: 170 AIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ +T ++N+ G R P+ H I+ G+L +
Sbjct: 71 VLQTYNGTQMPATDQTFRLNWASFGIGERRPDAAPE------------HSIFVGDLAPDV 118
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P + AKV+ + T RS+G+GFV F + A+ MNGV RP
Sbjct: 119 TDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRP 178
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 179 MRISAATPK 187
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 23/195 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V D T RS+G+GFV E A+
Sbjct: 109 IFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTE 168
Query: 174 FDGSQIGGRTVKVN--FPEVPRGG--------------ERAAMGPKLQNSYQGFVDSPHK 217
+G R ++++ P+ G A P +Q + +
Sbjct: 169 MNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTT 228
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
I+ GNL ++ + L+ ++S K+ +GFGFV F T + A+ M
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKI------QPGKGFGFVQFGTRASAEEAIQKM 282
Query: 278 NGVEVEGRPLRLNMA 292
G + + +R++
Sbjct: 283 QGKMIGQQVVRISWG 297
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL +++ L + + G + S +I +GFGFV G+ A+EAI+
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKI------QPGKGFGFVQFGTRASAEEAIQKM 282
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF 211
G IG + V++++ R M P ++Y G+
Sbjct: 283 QGKMIGQQVVRISW---GRTLTARQMDPNQWSAYYGY 316
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G+L + + L F ++S K+I + TG+ G+GFV F + + L
Sbjct: 16 LWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTY 75
Query: 278 NGVEVEG--RPLRLNMAN----ERAPPVLP 301
NG ++ + RLN A+ ER P P
Sbjct: 76 NGTQMPATDQTFRLNWASFGIGERRPDAAP 105
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 25/226 (11%)
Query: 89 QEEEEEEEAVEEEEEP-----KVAASDEA-ARLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
++ ++++ EEE EP KV D A A L+ GNL +++ L F E G + A
Sbjct: 203 EKPQQKKRKAEEEPEPAAKKAKVNLPDGASANLFAGNLSWNVDEEWLRSEFEEFGELVGA 262
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV-------PRGG 195
IV DR + RSRGFG+V +VE+A +A +++ GR + ++F PR
Sbjct: 263 RIVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANARTNAGGNPR-- 320
Query: 196 ERAAMGPKLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ERA + + F D SP ++ GNL + +++ F +L ++ +
Sbjct: 321 ERA------DSRAKSFGDQTSPESDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDP 374
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+GR +GFG+V F + ++ ++AL+A G ++ GR +R++ + R P
Sbjct: 375 DSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTPRQP 420
>gi|310793176|gb|EFQ28637.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 769
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 103 EPKVA-ASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
EPK A EA R L+V +LP + TS SL + F+E V A +V D+ T SRG+GFVT
Sbjct: 37 EPKAKKARTEANRSLFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYGFVT 96
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV-PRGGERAAMGP----KLQNSYQGFVDS- 214
+ E+A EA + + GR ++V+ E R G+ +A+G + Q Q ++
Sbjct: 97 LTDAEDAMEAKKKLNNMMWEGRRIRVDVAEARHRDGKESAVGAAAAGQKQKRAQELEEAR 156
Query: 215 -PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
P K+ NL W + TS+ L F+ G++ + G+ +GFGFVT ++ +
Sbjct: 157 KPPKLIIRNLPWSIKTSEQLGALFRAY-GVVKF-ADLPQNKGKLKGFGFVTLRGRKNAEK 214
Query: 273 ALDAMNGVEVEGRPLRLNMA 292
AL+ MNG ++GRP+ ++ A
Sbjct: 215 ALE-MNGKVIDGRPVAVDWA 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
++D + L++ NLP+++T L E F + G V A +V DR T+R G GFV + E+A
Sbjct: 346 STDNKSTLFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATERPAGTGFVCFVNEEDA 405
Query: 168 KEAIR 172
K I+
Sbjct: 406 KACIK 410
>gi|154270523|ref|XP_001536116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409920|gb|EDN05308.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 633
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +S+G+GFVT E+A +A+ F
Sbjct: 44 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 103
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVD-------SPHKIYAGNLGWG 226
+GS GR +K+ E PR E G + S+ V P K+ NL W
Sbjct: 104 NGSDFDGRKLKIEVAE-PRHREIDENQGKSVSISHLKQVREIRKTQAQPPKLIIRNLPWS 162
Query: 227 LTS-QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ L + F+ G + VI +R T S GFGFV ++ + AL+A+NG EV+GR
Sbjct: 163 IAEPDQLSNLFRS-FGKVKHAVIPKRGTKHS-GFGFVVLRGRKNAEKALNAVNGKEVDGR 220
Query: 286 PLRLNMANERA 296
L ++ A E++
Sbjct: 221 TLAVDWAVEKS 231
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 72 FDGFQ-VTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLA 130
+D FQ T+D DE E ++ +E VE+E A+ +++ NLP++ T SL
Sbjct: 233 WDEFQNHTDDVIDEGVEEDAGKKIDEDVEDERN--------ASTVFIRNLPFNATDDSLY 284
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
E F + G + A +V D TDR RG FV E+A +R
Sbjct: 285 EHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNEDAISCLR 326
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 75 FQVTEDSQDE--PETEQEEEEEEEAVEEEEEPKVAAS-DEAAR------LYVGNLPYSMT 125
+ T+ S D PE+ Q+E E + +E P AS E R LYVGNLP S +
Sbjct: 7 IEATQTSPDNAVPESNQQENEVTQDESKESTPVTPASATEGGRETSNKILYVGNLPKSAS 66
Query: 126 SSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVK 185
++E+F+ + + S +++ D+ + F+ +EA A+ +G + ++
Sbjct: 67 EEQISELFSVSKPIKSIKLLNDK-NKLGFNYAFIEFDDNQEADMALSTLNGKLLNNCEIR 125
Query: 186 VNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSA 245
VN+ + A + S D + ++ G+L + + L+ AF A
Sbjct: 126 VNW-----AYQSATIA-----SSSTPEDPTYNLFVGDLSSEVNDEALKKAFNKFDSFKEA 175
Query: 246 KVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
V+++ T RSRG+GFVTF ED + AL MNG + GR +R N A
Sbjct: 176 HVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGRAIRCNWA 222
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG+L + L E+F G VAS + D VT RS G+ +V +A+ A+
Sbjct: 12 SASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQAADAERAL 71
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ + I G+ ++ + + R+ +G I+ NL G+ ++
Sbjct: 72 DSMNFTDIKGKPCRIMWSQRDPSVRRSGVG---------------NIFVKNLHEGIDNKQ 116
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L D F +LS KV+ +R TG S+G+G+V +ET E SA+D ++G+ ++G+ +++ +
Sbjct: 117 LYDTFSLFGNILSCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGV 176
Query: 292 ANER 295
R
Sbjct: 177 FMRR 180
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +++VG L +++ + L G V SA + DR T +SRGFG+V + AK+A
Sbjct: 201 ETNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKA 260
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
G ++ GR ++++ P+G K + ++ GNL + ++
Sbjct: 261 FEEGQGKEVDGRAIRIDL-STPKGDVTDNRAKKFNDQRSA---PSSTLFIGNLSFDISED 316
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+ +AF + ++ + +GR +GFG+V F E Q+A+DAM G E+ GRPLRL+
Sbjct: 317 DVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLD 376
Query: 291 MANER 295
+ R
Sbjct: 377 FSTPR 381
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS++ +++G+L M L FA+AG V S +++ ++ T +S +GF+ + E A
Sbjct: 74 ASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 168 KEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++ ++ ++G+ + + ++N+ G +RA +G + S I+ G+L
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSG------SDLSIFVGDLAS 187
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LRD F + P + AKV+ + TGRS+G+GFV F+ + A+ MNG+
Sbjct: 188 DVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSS 247
Query: 285 RPLRLNMANERAP 297
R +R+ +A + P
Sbjct: 248 RAMRIGVATPKKP 260
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
A S ++VG+L +T + L + F+ +V A++V D T RS+G+GFV
Sbjct: 172 AGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDES 231
Query: 166 EAKEAIRLFDGSQIGGRTVKVN-------------FPE-VPRGGERAAMGPKLQNSYQGF 211
E A+ +G R +++ FP+ V G A+ G Q S
Sbjct: 232 ERSRAMTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDS 291
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
S ++ G L +T + LR +F ++S K+ +G GFV F +
Sbjct: 292 DLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIP------AGKGCGFVQFSERSAAE 345
Query: 272 SALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTE 309
A++ +NG + + +RL+ PA K+ +T+
Sbjct: 346 DAIEKLNGTVIGAQTVRLSWGRN------PANKQFRTD 377
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F++ G V S +I +G GFV A++AI
Sbjct: 298 VFVGGLDSEVTDEELRQSFSQFGNVVSVKI------PAGKGCGFVQFSERSAAEDAIEKL 351
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+G+ IG +TV++++ P + R G + Y G
Sbjct: 352 NGTVIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYG 388
>gi|302892801|ref|XP_003045282.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
gi|256726207|gb|EEU39569.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
Length = 718
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A +E L+V +LP S T+ +L + F++ V A +V D+ T SRG+GFVT
Sbjct: 35 KRARVEERRSLFVRSLPPSATNETLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTFADA 94
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
++A EA + + GR +++ E PR A + + + P K+ NL
Sbjct: 95 DDATEAKKALHNQEWDGRRLRIEIAE-PRHRNSATGEVSANKARKEELQKPPKLIIRNLP 153
Query: 225 WGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
W + TS+ L + F+ K+ F + G+ +GFGF+T ++ + AL+A+NG
Sbjct: 154 WSIKTSEQLSNLFRS-----FGKIKFADLPQSQGKLKGFGFITIRGKKNAEKALEAINGK 208
Query: 281 EVEGRPLRLNMA 292
E++GR L ++ A
Sbjct: 209 EIDGRTLAVDWA 220
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D + L++ NLP++ T L F G V A +V D+VT++ G GFV VE+AK
Sbjct: 317 TDNTSTLFIRNLPFTTTDEQLKGFFGHFGKVRYARVVMDKVTEKPAGTGFVCFFDVEDAK 376
Query: 169 EAIR 172
I+
Sbjct: 377 NCIK 380
>gi|351697204|gb|EHB00123.1| Nucleolin [Heterocephalus glaber]
Length = 757
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ LY+ NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 529 SGESKTLYLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 584
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 585 EALNSCNKREIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEETT 631
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR++F G G A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 632 EETLRESFDGSIG---ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 688
Query: 289 LNMANER 295
L+ A +
Sbjct: 689 LDWAKPK 695
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 100 EEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+ + K + D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 426 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 480
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS--- 214
+ + +A++ G++I GR+V + + G K QN Y+G +S
Sbjct: 481 IEFKTEADAEKTFEEKQGTEIDGRSVSLYY-----------TGEKGQNQDYRGGKNSTWS 529
Query: 215 --PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAE 268
+Y NL + T + L++ F+ K F + G+S+G+ F+ F + E
Sbjct: 530 GESKTLYLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFE 581
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPP 298
D + AL++ N E+EGR +RL + R P
Sbjct: 582 DAKEALNSCNKREIEGRTIRLELQGPRGSP 611
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 115/216 (53%), Gaps = 10/216 (4%)
Query: 85 PETEQEEEEEEEAVEEE---EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
P +++ EE +E + ++ EEP AA + L+VGN+ +++ L F G +
Sbjct: 188 PSKKRKAEEVDEPIVKKSKVEEP--AAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVG 245
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG 201
++ DR T R++GFG+V + +A +A + ++ GR + V+F PR A G
Sbjct: 246 CRVITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLNVDF-STPRAKPDANGG 304
Query: 202 PKLQNSYQGFVDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
+ N Y G SP + ++ GN+ + +++ +++ F + + +R TG +GF
Sbjct: 305 ARA-NKY-GDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGF 362
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+V F + ++ +AL+A+NG ++ GR +R++ A R
Sbjct: 363 GYVDFSSQQEATAALEALNGQDIGGRAIRIDYATPR 398
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GN+ W + LR F+G ++ +VI +R TGR++GFG+V F A D A M
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEM 278
Query: 278 NGVEVEGRPLRLNMANERAPP 298
+ E++GR L ++ + RA P
Sbjct: 279 HEYELDGRQLNVDFSTPRAKP 299
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++GN+ + ++ S+ EVFAE G++ + DR T +GFG+V S +EA A+
Sbjct: 321 LFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEAL 380
Query: 175 DGSQIGGRTVKVNF--PEVPRGG 195
+G IGGR +++++ P GG
Sbjct: 381 NGQDIGGRAIRIDYATPREDNGG 403
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
E ++ K ++ E A ++VG L +S+ L F G V SA ++ +R TDRSRG+G+V
Sbjct: 243 ESKKAKTESNGEPATIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYV 302
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-- 217
+ A++A++ G +I GR + + + A P+ + Q F D+P +
Sbjct: 303 DFENKFYAEKAVKEMHGKEIDGRPINCDM-----STSKPAGNPRNDRAKQ-FGDTPSQPS 356
Query: 218 --IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++ GNL + + + F ++S ++ T + +GFG+V + + ++ Q A +
Sbjct: 357 DTLFLGNLSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAFE 416
Query: 276 AMNGVEVEGRPLRLNMA 292
A+ G ++ RP+RL+ +
Sbjct: 417 ALQGHYIDNRPVRLDFS 433
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P I+ G L W + + L+ F+ G++SA+VI ER T RSRG+G+V FE + A+
Sbjct: 255 PATIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKAV 314
Query: 275 DAMNGVEVEGRPLRLNMANER 295
M+G E++GRP+ +M+ +
Sbjct: 315 KEMHGKEIDGRPINCDMSTSK 335
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 113/214 (52%), Gaps = 10/214 (4%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
+++ E +E V ++ + S+ +A L+VGNL +++ L F G ++ IV D
Sbjct: 240 KRKAESDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTD 299
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQ 205
R + RSRGFG+V + E+A +A G+++ GR + +++ + GG + + Q
Sbjct: 300 RDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGAK----DRSQ 355
Query: 206 NSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
+ F D SP ++ GN+ +G +++ F + ++ + +GR +GFG+
Sbjct: 356 ARAKSFGDQTSPESDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGY 415
Query: 262 VTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ F + ++ +SAL+ + G E+ GR +RL+ + R
Sbjct: 416 IQFSSVDEARSALNELQGSELAGRAMRLDFSTPR 449
>gi|145350218|ref|XP_001419511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579743|gb|ABO97804.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 194
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAG---TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
++YVGNLPY + L + F+ A +V A+I+ R RS+G G VT S E+AK+A
Sbjct: 15 KVYVGNLPYGCSWQDLKDHFSNAMGGESVRFADILTSR-DGRSKGCGIVTFNSSEDAKKA 73
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-KIYAGNLGWGLTS 229
I ++IG R + F R GER G L+N SP +Y GNL W
Sbjct: 74 IETMHDTEIGERKI---FVREDREGER---GNDLRNRIGPSATSPDASVYVGNLPWSTRW 127
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
Q L+D F+ + A V + GRSRG+G VTF + Q A++ +NG + R L
Sbjct: 128 QELKDIFRKVGNVAHADVTMG-FDGRSRGWGVVTFMDPQCAQVAIERLNGTMLNDRAL 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 75 FQVTEDSQDEPETEQEEE--EEEEAVEEEEEPKV----------AASDEAARLYVGNLPY 122
F +ED++ ET + E E + V E+ E + +A+ A +YVGNLP+
Sbjct: 64 FNSSEDAKKAIETMHDTEIGERKIFVREDREGERGNDLRNRIGPSATSPDASVYVGNLPW 123
Query: 123 SMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGR 182
S L ++F + G VA A++ RSRG+G VT + A+ AI +G+ + R
Sbjct: 124 STRWQELKDIFRKVGNVAHADVTMG-FDGRSRGWGVVTFMDPQCAQVAIERLNGTMLNDR 182
Query: 183 TVKVNFPEVPR 193
+ V E R
Sbjct: 183 ALIVRRDERAR 193
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKV--IFERYTGRSRGFGFVTFETAED 269
V++ K+Y GNL +G + Q L+D F G S + I GRS+G G VTF ++ED
Sbjct: 10 VNADTKVYVGNLPYGCSWQDLKDHFSNAMGGESVRFADILTSRDGRSKGCGIVTFNSSED 69
Query: 270 LQSALDAMNGVEVEGRPL 287
+ A++ M+ E+ R +
Sbjct: 70 AKKAIETMHDTEIGERKI 87
>gi|408391758|gb|EKJ71126.1| hypothetical protein FPSE_08632 [Fusarium pseudograminearum CS3096]
Length = 770
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A +++ L+V +LP TS SL + F++ V A +V D+ T SRG+GFVT+
Sbjct: 34 KRARTEDRRSLFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADA 93
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG----------FVDS 214
E+A EA + D GR ++++ E P+ +N+ G +
Sbjct: 94 EDAVEAKKALDKQDWNGRRIRIDVAE-----------PRQRNNTTGELPAHKIRKEEIQR 142
Query: 215 PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDL 270
P+K+ NL W + ++ L F+ KV F + G+ +GFGFVT +
Sbjct: 143 PNKLIIRNLPWSIKKAEQLEHLFRS-----YGKVKFADLPQTKGKLKGFGFVTLRGRPNA 197
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
+ AL+A+NG E++GR L ++ A
Sbjct: 198 ERALEAINGKEIDGRTLAVDWA 219
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EPK +D ++ ++V NLP++ T L F G + A +V D+VT++ G GFV
Sbjct: 329 EPKKLMTDNSSTVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFI 388
Query: 163 SVEEAKEAIR 172
+EAK I+
Sbjct: 389 DADEAKSCIK 398
>gi|406997918|gb|EKE15908.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 93
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LYVG LPYS T SL E F++AG V SA I+ DR++ RS+GFGFV M + E A++AI
Sbjct: 2 AKKLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAI 61
Query: 172 RLFDGSQIGGRTVKVN 187
+F G + GGRT+ VN
Sbjct: 62 EMFHGKEFGGRTLTVN 77
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K+Y G L + T + L + F + SA +I +R +GRS+GFGFV T E Q A++
Sbjct: 4 KLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEM 63
Query: 277 MNGVEVEGRPLRLNMA 292
+G E GR L +N A
Sbjct: 64 FHGKEFGGRTLTVNEA 79
>gi|46111259|ref|XP_382687.1| hypothetical protein FG02511.1 [Gibberella zeae PH-1]
Length = 767
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A +++ L+V +LP TS SL + F++ V A +V D+ T SRG+GFVT+
Sbjct: 34 KRARTEDRRSLFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADA 93
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG----------FVDS 214
E+A EA + D GR ++++ E P+ +N+ G +
Sbjct: 94 EDAVEAKKALDKQDWNGRRIRIDVAE-----------PRQRNNTTGELPAHKIRKEEIQR 142
Query: 215 PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDL 270
P+K+ NL W + ++ L F+ KV F + G+ +GFGFVT +
Sbjct: 143 PNKLIIRNLPWSIKKAEQLEHLFRS-----YGKVKFADLPQTKGKLKGFGFVTLRGRPNA 197
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
+ AL+A+NG E++GR L ++ A
Sbjct: 198 ERALEAINGKEIDGRTLAVDWA 219
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
EPK +D ++ ++V NLP++ T L F G + A +V D+VT++ G GFV
Sbjct: 332 EPKKLMTDNSSTVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFI 391
Query: 163 SVEEAKEAIR 172
+EAK I+
Sbjct: 392 DADEAKSCIK 401
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE L++G+L Y M + L FA G + SA+++ ++ T + G+GF+ S A+
Sbjct: 58 ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 117
Query: 169 EAIRLFDGSQIGG---RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLG 224
++ F+ + I + ++N+ + G +R DSP + I+ G+L
Sbjct: 118 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRD--------------DSPDYTIFVGDLA 163
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L + F+ P + AKV+ +R TGR++G+GFV F + A+ MNGV
Sbjct: 164 ADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCS 223
Query: 284 GRPLRLNMANER 295
RP+R+ A +
Sbjct: 224 TRPMRIGPAASK 235
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+AA P +Q + D ++ G+L + + L F ++SAKVI + TG+
Sbjct: 46 QAAAPPSVQPTT---ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQV 102
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRP---LRLNMAN 293
G+GF+ F + + L N + P RLN A+
Sbjct: 103 EGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWAS 142
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 19/189 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE L++G+L Y M + L FA G + SA+++ ++ T + G+GF+ S A+
Sbjct: 58 ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 117
Query: 169 EAIRLFDGSQIGG---RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLG 224
++ F+ + I + ++N+ + G +R DSP + I+ G+L
Sbjct: 118 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRD--------------DSPDYTIFVGDLA 163
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L + F+ P + AKV+ +R TGR++G+GFV F + A+ MNGV
Sbjct: 164 ADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCS 223
Query: 284 GRPLRLNMA 292
RP+R+ A
Sbjct: 224 TRPMRIGPA 232
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+AA P +Q + D ++ G+L + + L F ++SAKVI + TG+
Sbjct: 46 QAAAPPSVQPTT---ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQV 102
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRP---LRLNMAN 293
G+GF+ F + + L N + P RLN A+
Sbjct: 103 EGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWAS 142
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL + F+++ + A +V D T +S+G+GFVT E+ A+ F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADCEDVARALEEF 109
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMG-PKLQNSYQGFVDSPHKIYAGNLGWG 226
+GS G+ +K+ E PR GG+ + PK + + + P K+ NL W
Sbjct: 110 NGSAFDGKKLKIEVAE-PRHRKVDEKGGKSVSTSKPKRERENKRALVQPPKLIIRNLPWS 168
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ +A G + VI ++ S GFGFV ++ + AL+A+NG EV+GR
Sbjct: 169 IAEPEQLEALFRSFGKVKHAVIPKKGNKHS-GFGFVVLRGRKNAEKALEAVNGKEVDGRT 227
Query: 287 LRLNMANER 295
L ++ A E+
Sbjct: 228 LAVDWAAEK 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 94 EEEAVEEEEEPKVAASDE----AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
+++ E+E+ KV A E A+ +++ NLP++ T SL E F + G + A +V+D
Sbjct: 250 KDDGTEKEDNNKVHAEVEDDRNASTIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPE 309
Query: 150 TDRSRGFGFVTMGSVEEAKEAIR 172
TDR RG FV E A +R
Sbjct: 310 TDRPRGTAFVCFWDKENANSCLR 332
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 93 EEEEAVEEEEE---PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
++ +A EE+EE PK A ++E ++ G + + T+ + E F E G + I D
Sbjct: 116 KKRKAEEEQEEIPVPKAAKTEENYTIWCGGISFEATADDVREFFGECGEIKDVRIRIDEA 175
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
T ++RGF + + +EAK+A G++ GR ++++ A G K N+
Sbjct: 176 TGKNRGFCHIDF-ATQEAKDAAVALSGNEFLGRRIRID----------GADGGKKTNT-S 223
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLR----DAFQGQPGLL-SAKVIFERYTGRSRGFGFVTF 264
G + K++ NL R +AFQ ++ ++ + R +G +G G++ F
Sbjct: 224 GPASATKKVFVANLNRDYDEDAHRTALTEAFQEFGTIVGDIRLPYNRESGALKGIGYIEF 283
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
ET E ++A+ MNGVE+ GRPLR + + +
Sbjct: 284 ETTEQAEAAVKGMNGVEINGRPLRTDFSGD 313
>gi|410082555|ref|XP_003958856.1| hypothetical protein KAFR_0H03110 [Kazachstania africana CBS 2517]
gi|372465445|emb|CCF59721.1| hypothetical protein KAFR_0H03110 [Kazachstania africana CBS 2517]
Length = 441
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 35/200 (17%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL Y T L + F++ G V A+I+ R RG G V + ++ EAIR +
Sbjct: 121 IFVGNLTYDCTPDDLRDFFSQIGEVVRADIITSRG--HHRGMGTVEFTNNDDVTEAIRQY 178
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN---------------------------S 207
DGS R + V P R + P + +
Sbjct: 179 DGSDFMERQIFVRQDNPPPESRRERVPPSNDHRDRYAASNDRHSRPYDRASSRNTPSDGN 238
Query: 208 YQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
Y GF +I+ NL + + Q L+D F+ +L A V + + GRSRGFG V F
Sbjct: 239 YDGF-----EIFVANLPFSVNWQALKDMFKPCGNVLRADVELD-HVGRSRGFGTVLFSNQ 292
Query: 268 EDLQSALDAMNGVEVEGRPL 287
ED++ A+D NG E+EGR L
Sbjct: 293 EDMRRAIDDYNGYEIEGRRL 312
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NLP+S+ +L ++F G V A++ D V RSRGFG V + E+ + AI +
Sbjct: 244 IFVANLPFSVNWQALKDMFKPCGNVLRADVELDHVG-RSRGFGTVLFSNQEDMRRAIDDY 302
Query: 175 DGSQIGGRTVKVN-FPEVPRGGERAAMGPKLQNSY---------------QGFVDSPHK- 217
+G +I GR + V R G R ++S +G++ +
Sbjct: 303 NGYEIEGRRLDVREGYRNSRNGNRNGADETNKDSNETEAQAQSNSTVDFTEGYISGDERN 362
Query: 218 --IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
IY NL + L D F+ +++A++ ++ + G + +E ED ++
Sbjct: 363 NFIYCSNLPFSTDRSDLYDLFETIGKVINAELRYDS-ANQPTGVAVIEYENIEDADVCIE 421
Query: 276 AMNGVEVEGRPLRLNMA 292
+N G L ++ A
Sbjct: 422 RLNNYNYGGCDLVISYA 438
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 197 RAAMGPKL----QNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
+ GP+L +SY+ V+ + I+ GNL + T LRD F ++ A +I
Sbjct: 94 KGDYGPRLARELDSSYEEKVNRNYSNSIFVGNLTYDCTPDDLRDFFSQIGEVVRADIITS 153
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN-------ERAPP 298
R G RG G V F +D+ A+ +G + R + + N ER PP
Sbjct: 154 R--GHHRGMGTVEFTNNDDVTEAIRQYDGSDFMERQIFVRQDNPPPESRRERVPP 206
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 68 FSASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSS 127
+ S +G + D ++ E E + + + + E ++ + +Y NLP+S S
Sbjct: 318 YRNSRNGNRNGADETNKDSNETEAQAQSNSTVDFTEGYISGDERNNFIYCSNLPFSTDRS 377
Query: 128 SLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN 187
L ++F G V +AE+ YD ++ G + ++E+A I + GG + ++
Sbjct: 378 DLYDLFETIGKVINAELRYD-SANQPTGVAVIEYENIEDADVCIERLNNYNYGGCDLVIS 436
Query: 188 F 188
+
Sbjct: 437 Y 437
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A+ L+V NLP S + +L E F + G V S +++ D T S+ GF++ ++A
Sbjct: 177 AAKHFTNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQA 236
Query: 168 KEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAG 221
+ A+ + +I G+ + + R E A K++ YQG +Y
Sbjct: 237 EAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGV-----NLYVK 291
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL + +GLR+AF+ + SAKVI + GRS+GFGFV F + E+ A+ MNG
Sbjct: 292 NLDDSIDDEGLREAFKQFGNITSAKVITD-LNGRSKGFGFVCFSSPEEATKAVTEMNGRI 350
Query: 282 VEGRPLRLNMANER 295
G+PL + +A +
Sbjct: 351 FGGKPLYVGLAQRK 364
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L + F +G V S + D VT RS G+ +V +A+ A+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + P L+ S QG ++ NL + ++ L
Sbjct: 62 TMNFDVIKGKPIRIMW---------SQRDPSLRRSGQG------NVFIKNLDRSIDNKAL 106
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL---RL 289
D F +LS KV+ + S+GFGFV +E+ E Q A++ +NG+ +E + + R
Sbjct: 107 YDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARF 164
Query: 290 NMANERAPPVLPAAKE 305
N+R AAK
Sbjct: 165 KSRNDRMREFGDAAKH 180
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+GFGFV S E A+ AI
Sbjct: 92 VFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKV 149
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V R R + ++ + F + ++ NL + L +
Sbjct: 150 NGMLMEDKKV-----FVARFKSRNDRMREFGDAAKHFTN----LFVKNLPDSWDTDALLE 200
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ ++S KVI + TG S+ GF++F+ + ++A++ M+ E+EG+ L A +
Sbjct: 201 NFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQK 260
Query: 295 RA 296
+A
Sbjct: 261 KA 262
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L D FQ +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTM 63
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + + + SID L + S+
Sbjct: 64 NFDVIKGKPIRI-MWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSS 112
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E E + + E +++E + + LYV NL S+ L E F + G +
Sbjct: 258 AQKKAERSSELKAKYEKIKQERIQRY----QGVNLYVKNLDDSIDDEGLREAFKQFGNIT 313
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ D + RS+GFGFV S EEA +A+ +G GG+ + V + R +R A
Sbjct: 314 SAKVITD-LNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ--RKEDRKA- 369
Query: 201 GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR------DAFQGQP 240
LQ Y V + ++ A +G + +Q + QGQP
Sbjct: 370 --HLQQQYMQRVSTGIRMQAF-MGNQVVNQNFQPPRYILPTMQGQP 412
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
S++ +++G+L M L FA+AG V S +++ ++ T +S +GF+ + E A
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 168 KEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++ ++ ++G+ + + ++N+ G +RA +G + S I+ G+L
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSG------SDLSIFVGDLAS 187
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LRD F + P + AKV+ + TGRS+G+GFV F+ + A+ MNG+
Sbjct: 188 DVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSS 247
Query: 285 RPLRLNMANERAPPVL 300
R +R+ +A + P +
Sbjct: 248 RAMRIGVATPKKPSAM 263
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAG-TVASAEIVYDRVTDRSRGFGFVTMGSV 164
A S ++VG+L +T + L + F+ +V A++V D T RS+G+GFV
Sbjct: 171 AAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDE 230
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNF--PEVPRG-------GERAAMGPKLQNSYQGFVDSP 215
E A+ +G R +++ P+ P G A+ G Q S S
Sbjct: 231 SERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSN 290
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++ G L +T + LR +F ++S K+ +G GFV F + A++
Sbjct: 291 TTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIP------AGKGCGFVQFSERSAAEDAIE 344
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKETKTE 309
+NG + + +RL+ PA K+ +T+
Sbjct: 345 KLNGTVIGTQTVRLSWGRN------PANKQFRTD 372
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F++ G V S +I +G GFV A++AI
Sbjct: 293 VFVGGLDSDVTDEELRQSFSQFGNVVSVKI------PAGKGCGFVQFSERSAAEDAIEKL 346
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+G+ IG +TV++++ P + R G + Y G
Sbjct: 347 NGTVIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYG 383
>gi|357128483|ref|XP_003565902.1| PREDICTED: uncharacterized protein LOC100828680 [Brachypodium
distachyon]
Length = 357
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 94/190 (49%), Gaps = 27/190 (14%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
Q+E +EE E+EE AA LYVGNL + + LA++F G V +EI+YDR
Sbjct: 186 QQECDEEYTSEDEEYYGPAAE---GTLYVGNLRHHIDDEYLAQLFENVGIVEFSEILYDR 242
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQN 206
T +SRG+G+VTM +VEEA+ A+ F ++ G+ TV++ P R
Sbjct: 243 ETGQSRGYGYVTMSTVEEAEMAVNTFHRRELYGKLMTVEMRSPHQHR------------- 289
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG--RSRGFGFVTF 264
SP +I+ GNL + L F ++ KV + G RSR FGFVT
Sbjct: 290 -------SPVRIFVGNLPCEVDGSMLNLLFSEHGQVVDTKVAYGYVKGVWRSRRFGFVTM 342
Query: 265 ETAEDLQSAL 274
T E+ A+
Sbjct: 343 ATREESDDAI 352
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD--RSRGFGFVTMGSVEEAKEA 170
R++VGNLP + S L +F+E G V ++ Y V RSR FGFVTM + EE+ +A
Sbjct: 292 VRIFVGNLPCEVDGSMLNLLFSEHGQVVDTKVAYGYVKGVWRSRRFGFVTMATREESDDA 351
Query: 171 IRL 173
I L
Sbjct: 352 IYL 354
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y GNL + + L F+ + ++++++R TG+SRG+G+VT T E+ + A++
Sbjct: 209 LYVGNLRHHIDDEYLAQLFENVGIVEFSEILYDRETGQSRGYGYVTMSTVEEAEMAVNTF 268
Query: 278 NGVEVEGRPLRLNM--ANERAPPVLPAAKETKTENSIDGSEL 317
+ E+ G+ + + M ++ PV E +DGS L
Sbjct: 269 HRRELYGKLMTVEMRSPHQHRSPVRIFVGNLPCE--VDGSML 308
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + LRD
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGARAREFTN----VYIKNFGDDMDEEKLRD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +S +V+ + +G+SRGFGFV+FE ED Q A+D MNG E+ G+P+ + A +
Sbjct: 210 VFNKYGNAMSIRVMTDD-SGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQK 268
Query: 295 R 295
+
Sbjct: 269 K 269
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L +VF + G S ++ D + +SRGFGFV+ E+
Sbjct: 185 ARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDD-SGKSRGFGFVSFERHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKI 218
A++A+ +G ++ G+ + V + ER A M YQG +
Sbjct: 244 AQKAVDEMNGKEMNGKPIYVG--RAQKKVERQAELKRKFEQMKQDRMTRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL G+ + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGIDDERLRKEFSPFGTITSAKVMLE--GGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVATKPLYVALAQRK 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
AAS A LYVG+L +T + L E F+ AG + S + D +T RS G+ +V +
Sbjct: 5 AASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I GR V++ + + P L+ S G I+ NL
Sbjct: 65 AERALDTMNFDVIKGRPVRIMWSQ---------RDPSLRKSGVG------NIFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+GFV FET E + A++ MNG+ + R
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDR 166
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 99 EEEEEPKVAA-SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
+E E +V A + E +Y+ N M L E+F+ G S +++ D RS+GFG
Sbjct: 176 RKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDN-NGRSKGFG 234
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQ 209
FV EEA++A+ +G +I GR + V E+ R E+ M + N YQ
Sbjct: 235 FVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQ--MKQERVNRYQ 292
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
G +Y NL G+ + LR F + SAKV+ E GRS+GFGFV F + E+
Sbjct: 293 GV-----NLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGRSKGFGFVCFSSPEE 345
Query: 270 LQSALDAMNGVEVEGRPLRLNMANER 295
A+ MNG V +PL + +A +
Sbjct: 346 ATKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + SRG+GFV + E A AI
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAATRAIETM 158
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V V R E A + N +Y N G + L
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEVGARAIEFTN-----------VYIKNFGDDMDDDRL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R+ F LS KV+ + GRS+GFGFV FE E+ Q A+ MNG E+ GR L + A
Sbjct: 208 REIFSRFGKTLSVKVMMDN-NGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRA 266
Query: 293 NER 295
+R
Sbjct: 267 QKR 269
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------------NVFIKNLDDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + SRG+GFV FET E A++ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAATRAIETMNGMLLNDR 166
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPIRI-MWSQRDP 91
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV NL + L + F+ GT+ SA+++ + RS+GFGFV S EEA +A
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGRSKGFGFVCFSSPEEATKA 349
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+ +G + + + V + R ER A+ L N Y
Sbjct: 350 VTEMNGRIVSTKPLYVALAQ--RKEERKAI---LTNQY 382
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EPK S EA ++V L +T+ L F + GTV A IV DR++ RS+G G+
Sbjct: 242 DEPKDDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGY 300
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
V S++ ++AI L G+ + G + V E R A G + G S +
Sbjct: 301 VEFRSIDLVEKAIAL-SGTIVMGLPINVQLTESERNKSHAGDGS--LHLPPGVTASGAIL 357
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL+ M
Sbjct: 358 YVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALEQME 417
Query: 279 GVEVEGRPLRLNMANERA 296
G E+ GR LR+N +E+
Sbjct: 418 GFELAGRTLRVNTVHEKG 435
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F +AG V A+IV DRV+ RS+G G+V
Sbjct: 195 EPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEF 254
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIY 219
+ E AI+L G ++ G + F E E+ + G +S H++Y
Sbjct: 255 KNEESVPLAIQLT-GQKLLGIPIIAQFTEA----EKNKAARNTEGHVSGNQNSIPFHRLY 309
Query: 220 AGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
GN+ + +T L++ F+ P G L + + GRSRG+GFV F + AL+ MN
Sbjct: 310 VGNIHFSITESDLQNVFE--PFGELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKMN 367
Query: 279 GVEVEGRPLRLNMANER 295
G ++ GRP+R+ + N++
Sbjct: 368 GFDLAGRPIRVGLGNDK 384
>gi|326926008|ref|XP_003209198.1| PREDICTED: nucleolin-like [Meleagris gallopavo]
Length = 425
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 18/194 (9%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
++E + E+ L V NL Y+ + +L E+F +A ++ + R +G+ FV
Sbjct: 189 QQENQKGGERESKTLIVNNLSYAASEETLQELFKKATSIKMPQ----NNQGRPKGYAFVE 244
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
+ E+AKEA+ + ++I GR +++ F P +G N+ GF +
Sbjct: 245 FPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGN---------MNARGGFNQQSKTL 295
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ L T + LR++F+G +SA+++ +R TG S+GFGFV F + ED ++A +AM
Sbjct: 296 FVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAME 352
Query: 279 GVEVEGRPLRLNMA 292
E++G + L+ A
Sbjct: 353 DGEIDGNKVILDFA 366
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 73/144 (50%), Gaps = 16/144 (11%)
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV 212
S+ FG+V S E+ +A++L +G ++ G +K+ E+A L+ + +
Sbjct: 61 SKRFGYVDFLSAEDMDKALQL-NGKKLMGLEIKL---------EKAKSKESLKENKK--E 108
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
++ NL + +T + +++ F+ L +++ + G S+G ++ F+T + +
Sbjct: 109 RDARTLFVKNLPYRVTEEEMKNVFEN---ALEVRLVLNK-EGSSKGMAYIEFKTEAEAEK 164
Query: 273 ALDAMNGVEVEGRPLRLNMANERA 296
AL+ G EV+GR + ++ E++
Sbjct: 165 ALEEKQGTEVDGRAMVIDYTGEKS 188
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EP+ S EA ++V L +T+ L F + G+V + IV DR++ RS+G G+
Sbjct: 258 DEPREDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGY 316
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSPH- 216
V SVE +A+ L G+ + G +++ E ER + P N + V +PH
Sbjct: 317 VEFRSVELVDKALGL-SGTVVMGLPIQIQHTEA----ERNRLHPGDGNLNLPPGVSAPHG 371
Query: 217 --KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ AED + AL
Sbjct: 372 GMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 431
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
+ M G E+ GR LR+N +E+
Sbjct: 432 EQMEGFELAGRTLRVNTVHEKG 453
>gi|367010890|ref|XP_003679946.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
gi|359747604|emb|CCE90735.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
Length = 345
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +++GNL Y T L + F+E G V A+I+ R RG G V + ++ EAI
Sbjct: 45 ANSIFIGNLTYDCTPEDLKDHFSEVGEVVRADIITSR--GHHRGMGTVEFTNSDDVDEAI 102
Query: 172 RLFDGSQIGGRTVKVNFPEVP------RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
R +D S R V V P R A K ++ Y ++++ NL +
Sbjct: 103 RRYDSSYFMDRQVFVRQDNPPPESARERPPREARERVKARDQYPQHQYPAYEVFVANLPY 162
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ Q L+D F+ ++ A V +R G SRGFG F T+E++Q+A++ NG E+EGR
Sbjct: 163 SINWQALKDMFKEVGNVIRADVELDR-NGYSRGFGTAIFGTSEEMQAAIERYNGYELEGR 221
Query: 286 PLRLNMAN-----ERAPPVLPAAKETKT 308
L + E AP P A E +
Sbjct: 222 VLDVREGRNAPGPETAPVAPPVAAEAEV 249
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y NLP S +S L ++F G V +AE+ YD + G V ++E+A +
Sbjct: 269 IYCTNLPLSTATSDLYDLFETIGKVNNAELKYD-ADGQPLGIAVVEYANIEDADVCMERL 327
Query: 175 DGSQIGGRTVKVNF 188
+ GG + +++
Sbjct: 328 NNYNYGGCDLDISY 341
>gi|145354241|ref|XP_001421399.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 288
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ARLYVGN+P+S T L E+FAE G V +I R RSRG+G V S EA+ A+
Sbjct: 8 SARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGR-QGRSRGYGLVEFNSEAEAQAAV 66
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-----HKIYAGNLGWG 226
DG+ +G RT+ V + P A G + S D+P + Y GNL W
Sbjct: 67 TRMDGTPLGDRTITVREDKAP----TKAAGGAKKASASVLGDAPAGGDGCRCYFGNLAW- 121
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
TS+ + G+ + R + GRS+G+ V F T E+ Q+A++ M+ E++GR
Sbjct: 122 ETSEETLTSHCASFGVNVVQCEVARQSGGRSKGWALVDFATPEEAQNAIEQMHNSEIQGR 181
Query: 286 PLRLNMANERAPPVLPAAK-ETKTENS 311
+ + + ER +A+ ET+ ENS
Sbjct: 182 SIIVRV--ERPGAGQKSARVETRPENS 206
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A + R Y GNL + + +L A G V + RS+G+ V + EEA
Sbjct: 107 AGGDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSGGRSKGWALVDFATPEEA 166
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ AI S+I GR++ V E P G+++A + + +NS S +I NL W
Sbjct: 167 QNAIEQMHNSEIQGRSIIVRV-ERPGAGQKSARVETRPENS------SGLQIVVRNLPWT 219
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
TS+ LR FQ +++A + TGRS+G+G V FET E Q+A+ NGVE+E RP
Sbjct: 220 TTSEDLRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRP 279
Query: 287 LRLNM 291
+++ +
Sbjct: 280 MQIKL 284
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S ++Y GN+ W T + LR+ F G+ + R GRSRG+G V F + + Q+A
Sbjct: 7 SSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQ-GRSRGYGLVEFNSEAEAQAA 65
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
+ M+G + R + + ++AP
Sbjct: 66 VTRMDGTPLGDRT--ITVREDKAP 87
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 96 EAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR 154
E + E P++ + R ++V L + + L F + G V A+IV DR++ RS+
Sbjct: 167 ENSKREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSK 226
Query: 155 GFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
G G+V + E +A++L G ++ G + V E A +++NS
Sbjct: 227 GVGYVEFKNEESVTQALQL-TGQKLLGIPIIVQLTE-------AEKNRQVRNSETATGAH 278
Query: 215 P-----HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAE 268
P H++Y GN+ + +T Q L+ F +P G L + + GRSRG+GFV + A
Sbjct: 279 PNSIPFHRLYVGNIHFNVTEQDLQAVF--EPFGELEFVQLQKDDNGRSRGYGFVQYREAS 336
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 337 QAREALEKMNGFDLAGRPIRVGLGNDKFTP 366
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 16/218 (7%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
Q P+ Q ++ ++ + + D+ L+VG+L + M + L F+ G V+S
Sbjct: 77 QHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSS 136
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAA 199
+++ +++T +S G+GFV S A+E ++ + GS + + ++N+ G +RA
Sbjct: 137 VKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAV 196
Query: 200 -MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSR 257
GP L ++ G+L +T L + F + P + SAKV+ + TGRS+
Sbjct: 197 ENGPDL------------SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 244
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+GFV F + AL MNG R +R+ +A +
Sbjct: 245 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPK 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAG-TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F++ +V SA++V D T RS+G+GFV G E A+
Sbjct: 204 VFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTE 263
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG-- 231
+G+ R ++V R A+ + Q+S Q + + G++G+G S G
Sbjct: 264 MNGAYCSNRQMRVGIATPKR-----AIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGES 318
Query: 232 ------------------LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
LR F ++S K+ +G GFV F + + A
Sbjct: 319 TNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDA 372
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
++++NG + +RL+ R+P
Sbjct: 373 IESLNGTVIGKNTVRLSWG--RSP 394
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVG L +++ + LA F G V A +++D +S+GFGFV + EEA +A+
Sbjct: 212 ANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVA 271
Query: 173 LFDGSQIGGRTVKVNFP--EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G +I GR ++ +F + ER A Q S +Y G L + L
Sbjct: 272 M-TGHEIDGRAIRCDFAAEKTDNPVERRAQKFNDQRSAPAAT-----LYLGGLSYDLNED 325
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+ +AF + + +R TG +GFG+V F + +AL+AMNG E+ GR +R++
Sbjct: 326 AVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEAMNGKELSGRRIRVD 385
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERY 252
R ++ A P ++ G + +Y G L W + ++ L FQ ++ A+V+F+
Sbjct: 189 RKADQEAQAPAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQ 248
Query: 253 TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+S+GFGFV F+TAE+ A+ AM G E++GR +R + A E+
Sbjct: 249 NQKSKGFGFVRFKTAEEAAKAV-AMTGHEIDGRAIRCDFAAEK 290
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
AA LY+G L Y + ++ E F + G + + DR T +GFG+V V++A A+
Sbjct: 310 AATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAAL 369
Query: 172 RLFDGSQIGGRTVKVNF 188
+G ++ GR ++V++
Sbjct: 370 EAMNGKELSGRRIRVDY 386
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+P +++ EEE A ++ + + A +A L+VGNL +++ + L F G ++
Sbjct: 266 KPSKKRKAEEETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVR 325
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
I+ +R T RSRGFG+V + +A +A G++I GR + +++ A P
Sbjct: 326 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDY---------ATGRPA 376
Query: 204 LQNSYQGFVD-------------SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
++ GF D SP ++ GNL + + + F + +L ++
Sbjct: 377 NKDQQGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLP 436
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
+ +GR +GFG+V + + ++ ++A + + G ++ GRP+RL+ + RA
Sbjct: 437 TDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPRA 484
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 102 EEPKVAASDEA-ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
+EP + S A A LYVG+L ++T S L ++F++ V S + D T RS G+G+V
Sbjct: 157 DEPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVN 216
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
+E+A A+ + + + + G+ +++ + + P ++ S G I+
Sbjct: 217 YTDLEDAARALDVLNFTPLNGKPIRIMY---------SHRDPSIRKSGTG------NIFI 261
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL G+ + L D F +LS KV + +G S+G GFV F++ E Q A+D +NG+
Sbjct: 262 KNLDKGIDHKALHDTFSAFGNILSCKVATDA-SGMSKGHGFVQFDSEEAAQKAIDKLNGM 320
Query: 281 EVEGRPLRLNMANERAPPVLPAAKETKTENSID 313
+ N++ V P ++ + E++I+
Sbjct: 321 ----------LLNDKQVFVGPFVRKQERESTIN 343
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 43/224 (19%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++ S L ++F++ G V S + D T RS G+G+V + ++ KE ++
Sbjct: 32 LYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDEKEKETIY 91
Query: 175 DGSQI----------------------------GGRTVK--VNFPEVPRGGERAAMGPKL 204
+G + GG K +NF V GGE A +
Sbjct: 92 EGFCVFCLIPSNYAIFFVLGFSYIHKKRRGKERGGELQKRELNFLRV--GGEMAEVQDH- 148
Query: 205 QNSYQGFVDSPH---------KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
+ G D P+ +Y G+L +T L D F ++S +V + T R
Sbjct: 149 EGLLSGTNDEPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHR 208
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPV 299
S G+G+V + ED ALD +N + G+P+R+ M + R P +
Sbjct: 209 SLGYGYVNYTDLEDAARALDVLNFTPLNGKPIRI-MYSHRDPSI 251
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + +L + F+ G + S ++ D + S+G GFV S E A++AI
Sbjct: 259 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATD-ASGMSKGHGFVQFDSEEAAQKAIDKL 317
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V P V R ER + K + + ++ N+ G+T + L
Sbjct: 318 NGMLLNDKQVFVG-PFV-RKQERESTINK---------EKFNNVFVKNISEGMTEEDLTR 366
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F G+ G +++ V+ G+S+ FGFV FE +D +++A+NG + + + + A +
Sbjct: 367 IF-GEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQK 425
Query: 295 RA 296
++
Sbjct: 426 KS 427
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V ++E ++ ++V N+ MT L +F E G + S ++ D +S+ FG
Sbjct: 333 VRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDG-DGKSKCFG 391
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH 216
FV +V++A ++ +G + + V + + ER + + + + + VD
Sbjct: 392 FVNFENVDDAAMSVEALNGQKFDDKEWYVG--KAQKKSEREIELKSRFEQNMKEAVDKFQ 449
Query: 217 --KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+Y NL + L++ F Q G +++ + G SRG GFV F + E+ AL
Sbjct: 450 GANLYIKNLDDSIGDDKLKELF-AQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRAL 508
Query: 275 DAMNGVEVEGRPLRLNMANER 295
MN V +PL + +A +
Sbjct: 509 AEMNSKMVVSKPLYVALAQRK 529
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E E ++ E+ + + A LY+ NL S+ L E+FA+ GT+ S +++
Sbjct: 424 QKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVM 483
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAI 171
D SRG GFV S EEA A+
Sbjct: 484 RDP-NGLSRGSGFVAFSSPEEASRAL 508
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDR 148
E++ EE V EEE + RL N+P++ T + +F + G V E+ +Y +
Sbjct: 72 EQQTEEPLVSEEEFSRT-------RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK 124
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+R+RG FV MGS EEA EA+ + + GR +KVN+ R + P ++
Sbjct: 125 --NRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNY---ARPKKEKTAPPPVKPKV 179
Query: 209 QGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
F ++ NL + +S+ L++ F G ++SA+V++ R G+GFV+F++
Sbjct: 180 VTF-----NLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSK 234
Query: 268 EDLQSALDAMNGVEVEGRPLRLN 290
++ ++AL G GRP+R++
Sbjct: 235 KEAEAALAEFQGKVFMGRPIRVD 257
>gi|356515764|ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
max]
Length = 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-VYDR 148
E++ EE V EEE + RL N+P++ T + +F + G V E+ +Y +
Sbjct: 72 EQQTEEPLVSEEEFSRT-------RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK 124
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+R+RG FV MGS EEA EA+ + + GR +KVN+ R + P ++
Sbjct: 125 --NRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNY---ARPKKEKTAPPPVKPKV 179
Query: 209 QGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
F ++ NL + +S+ L++ F G ++SA+V++ R G+GFV+F++
Sbjct: 180 VTF-----NLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSK 234
Query: 268 EDLQSALDAMNGVEVEGRPLRLN 290
++ ++AL G GRP+R++
Sbjct: 235 KEAEAALAEFQGKVFMGRPIRVD 257
>gi|347841454|emb|CCD56026.1| hypothetical protein [Botryotinia fuckeliana]
Length = 794
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 32/228 (14%)
Query: 94 EEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
EE ++P+ + A R L+V +LP + T++SL E+F++ + A +V D VT +
Sbjct: 20 EETQTHASKKPRKETNASARRSLFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQ 79
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR-------GGERAAMGPKLQ 205
S+G+GFVT E+A+ A+ F+G GR +K+ + PR GG+ PK +
Sbjct: 80 SKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQ-PRSRDAPAKGGDDGLKMPKEK 138
Query: 206 NSY------------QGFVDS--PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE 250
N+ + +S P K+ NL W + T L F G KV F
Sbjct: 139 NAIATEAAAVKKARQEKLAESKAPPKLIIRNLPWSVKTPDELAKLFMG-----FGKVKFA 193
Query: 251 ---RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+ GFGF+ ++ + AL A+NG E++GR L ++ A E+
Sbjct: 194 TMPKVKGKEAGFGFIVMRGKKNAEKALAAINGREIDGRQLAVDWAVEK 241
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
KV +D + L++ NLP++ ++L E F + G V A +V D+ TDR +G GFV +V
Sbjct: 343 KVLITDNSTTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNV 402
Query: 165 EEAKEAIR 172
++A+ R
Sbjct: 403 DDAESCFR 410
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T+ L + F L A V+ + T +S+G+GFVTF AED Q ALD NG +GR +
Sbjct: 52 TTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKM 111
Query: 288 RLNMANERA 296
++ +A R+
Sbjct: 112 KIEIAQPRS 120
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L Y M + L F G V + +++ +R + S G+GFV S A++A++ F
Sbjct: 95 IWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQNF 154
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + R K+N+ G +R+ + P H I+ G+L +T + L
Sbjct: 155 SGHVMPNTERAFKLNWASYSMGEKRSEVPPD------------HSIFVGDLAVDVTDEML 202
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + + AKVI + TGRSRG+GFV F D A+ MNGV RP+R+ +
Sbjct: 203 LELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGL 262
Query: 292 ANER 295
A R
Sbjct: 263 ATPR 266
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E+F+ + +V A+++ D T RSRG+GFV G + A+
Sbjct: 188 IFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTE 247
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGL 232
+G R ++V R + P Q+ VDS ++ +Y G L ++ L
Sbjct: 248 MNGVYCSTRPIRVGLATPRRSQGDSGSSPPRQSD----VDSTNRTVYVGGLDPNVSEDEL 303
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R AF L S K+ F + GFV F D + AL +NG + + +RL+
Sbjct: 304 RKAFAKYGDLASVKIPFGKQC------GFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWG 357
Query: 293 NERAP 297
R+P
Sbjct: 358 --RSP 360
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 104 PKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
P+ + D R +YVG L +++ L + FA+ G +AS +I + + GFV
Sbjct: 277 PRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC------GFVQFV 330
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
+ +A+EA++ +GS IG + +++++ P
Sbjct: 331 NRVDAEEALQGLNGSTIGKQAIRLSWGRSP 360
>gi|392339709|ref|XP_003753884.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 1-like [Rattus norvegicus]
Length = 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E+F+ GT+ S + D T RS G+ ++ +A+ A+
Sbjct: 13 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ +++ + G R+ MG I+ NL + ++ L D
Sbjct: 73 NFEMIKGQPIRIMWSHRDPGLRRSGMG---------------NIFIKNLENSIDNKALYD 117
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
F +LS+KV++ + SRGFGFV FET E Q A++ MNG+ + R +R
Sbjct: 118 TFSTFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVR 169
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G++ S+++VY+ SRGFGFV + E A++AI
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPK--LQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V+ ++P A++ P + + +Q +S H
Sbjct: 159 NGMLLNDRKVRSDYP-----WSLASLCPATLISSCFQVMTESSH---------------- 197
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
S+GFGFV F + E+ A+ MNG V +PL + +A
Sbjct: 198 -----------------------SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 234
Query: 293 NER 295
+
Sbjct: 235 QRK 237
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M + R P + + ENSID L + ST
Sbjct: 73 NFEMIKGQPIRI-MWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFST 121
>gi|154297435|ref|XP_001549144.1| hypothetical protein BC1G_12314 [Botryotinia fuckeliana B05.10]
Length = 794
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 32/228 (14%)
Query: 94 EEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
EE ++P+ + A R L+V +LP + T++SL E+F++ + A +V D VT +
Sbjct: 20 EETQTHASKKPRKETNASARRSLFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQ 79
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR-------GGERAAMGPKLQ 205
S+G+GFVT E+A+ A+ F+G GR +K+ + PR GG+ PK +
Sbjct: 80 SKGYGFVTFADAEDAQRALDEFNGQSFQGRKMKIEIAQ-PRSRDAPAKGGDDGLKMPKEK 138
Query: 206 NSY------------QGFVDS--PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE 250
N+ + +S P K+ NL W + T L F G KV F
Sbjct: 139 NAIATEAAAVKKARQEKLAESKAPPKLIIRNLPWSVKTPDELAKLFMG-----FGKVKFA 193
Query: 251 ---RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+ GFGF+ ++ + AL A+NG E++GR L ++ A E+
Sbjct: 194 TMPKVKGKEAGFGFIVMRGKKNAEKALAAINGREIDGRQLAVDWAVEK 241
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
KV +D + L++ NLP++ ++L E F + G V A +V D+ TDR +G GFV +V
Sbjct: 343 KVLITDNSTTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNV 402
Query: 165 EEAKEAIR 172
++A+ R
Sbjct: 403 DDAESCFR 410
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T+ L + F L A V+ + T +S+G+GFVTF AED Q ALD NG +GR +
Sbjct: 52 TTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKM 111
Query: 288 RLNMANERA 296
++ +A R+
Sbjct: 112 KIEIAQPRS 120
>gi|145348372|ref|XP_001418624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578854|gb|ABO96917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN 206
DR T RSRGF FVT+ S E+ + A+ +G + GR ++V+ + GER ++
Sbjct: 2 DRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQTA--GERRDRPMRMDG 59
Query: 207 SY--QGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFV 262
Q D+ ++ +Y GNL WG+ L+D G+ G + +++I +R TGRSRGFGFV
Sbjct: 60 ERRPQRNRDADNRRVYFGNLSWGMDHLDLQD-LCGEFGSVEDSRLITDRETGRSRGFGFV 118
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
T + + + +NG +V+GR LR+N+AN
Sbjct: 119 TMSSEAEADEVVAQLNGQDVDGRVLRVNIAN 149
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+ +T E + ++ E P+ + R+Y GNL + M L ++ E G+V +
Sbjct: 43 QAQTAGERRDRPMRMDGERRPQRNRDADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDSR 102
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
++ DR T RSRGFGFVTM S EA E + +G + GR ++VN
Sbjct: 103 LITDRETGRSRGFGFVTMSSEAEADEVVAQLNGQDVDGRVLRVNI 147
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+P +++ EEE A ++ + + A +A L+VGNL +++ + L F G ++
Sbjct: 258 KPSKKRKAEEETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVR 317
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
I+ +R T RSRGFG+V + +A +A G++I GR + +++ A P
Sbjct: 318 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDY---------ATGRPA 368
Query: 204 LQNSYQGFVD-------------SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
++ GF D SP ++ GNL + + + F + +L ++
Sbjct: 369 NKDQQGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLP 428
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
+ +GR +GFG+V + + ++ ++A + + G ++ GRP+RL+ + RA
Sbjct: 429 TDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPRA 476
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y GN+ +T L E+FA G + S +++ D+S +GFV A AI
Sbjct: 65 VYAGNIHTQVTEILLQEIFASTGPIESCKLIRK---DKS-SYGFVHYFDRRCASMAIMTL 120
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G I G+ +KVN+ A G + S S I+ G+L +T L D
Sbjct: 121 NGRHIFGQPMKVNWA--------YATGQREDTS------SHFNIFVGDLSPEVTDAALFD 166
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
+F A+V++++ TGRSRGFGFV+F +D Q+A++ MNG V R +R N A +
Sbjct: 167 SFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATK 226
Query: 295 RA 296
A
Sbjct: 227 GA 228
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L + F+ + + A +++D+ T RSRGFGFV+ + ++A+ AI
Sbjct: 150 IFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 209
Query: 175 DGSQIGGRTVKVNFP-------------------EVPRGGERAAMGPKLQNSYQGFVDSP 215
+G + R ++ N+ E+ G G +L N D+P
Sbjct: 210 NGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSED--GRELSNE-----DAP 262
Query: 216 HK------IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
+Y GNL +T L F L A VI E R +GFGFV + T ++
Sbjct: 263 ENNPQFTTVYVGNLSPEVTQLDLHRLFY----TLGAGVIEEVRVQRDKGFGFVRYNTHDE 318
Query: 270 LQSALDAMNGVE-VEGRPLRLNMANERAP 297
A+ N + R +R + N+ P
Sbjct: 319 AALAIQMGNAQPFLFSRQIRCSWGNKPTP 347
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EPK S EA ++V L +T+ L F + GTV + IV DR++ RS+G G+
Sbjct: 20 DEPKEDDS-EARSVFVSQLAARLTARDLGYFFEDKLGEGTVLDSRIVTDRISRRSKGIGY 78
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSPH- 216
V S++ ++A+ L G+ + G + V E ER + P N + V +PH
Sbjct: 79 VEFRSIDLVEKALGL-SGTVVMGLPIMVQLTE----SERNRLHPGDGNLNLPPGVHAPHG 133
Query: 217 --KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
++Y G+L + LT ++ F+ L + + TGRS+G+ FV ++ ED + AL
Sbjct: 134 AMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPEDAKMAL 193
Query: 275 DAMNGVEVEGRPLRLNMANERA 296
+ M+G E+ GR LR+N +E+
Sbjct: 194 EQMDGFELAGRTLRVNTVHEKG 215
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 185 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 244
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P +S H++Y G
Sbjct: 245 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEKN--RQARNPDAHSSNNQQSIPFHRLYVG 301
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 302 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 359
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 360 DLAGRPIRVGLGNDK 374
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F +AG V A+IV DRV+ RS+G G+V
Sbjct: 193 EPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEF 252
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIY 219
+ E AI+L G ++ G + F E E+ + G +S H++Y
Sbjct: 253 KNEESVPLAIQLT-GQKLLGIPIIAQFTEA----EKNKAARNTEGHVSGNQNSIPFHRLY 307
Query: 220 AGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
GN+ + +T L++ F+ P G L + + GRSRG+GFV F + AL+ MN
Sbjct: 308 VGNIHFSITESDLQNVFE--PFGELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKMN 365
Query: 279 GVEVEGRPLRLNMANER 295
G ++ GRP+R+ + N++
Sbjct: 366 GFDLAGRPIRVGLGNDK 382
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L E F + G VA A+IV DRV++RS+G G+V + E
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
A++L G ++ G V V P E+ ++S H++Y GN+ + +
Sbjct: 244 AAALQL-TGQKLLGIPVIVQ----PTEAEKNRQVRNTESSGHPNSVPFHRLYVGNIHFSI 298
Query: 228 TSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P G L + + +GRSRG+GFV F A + AL+ MNG ++ GRP
Sbjct: 299 TETDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRP 356
Query: 287 LRLNMANERAPP 298
+R+ + N++ P
Sbjct: 357 IRVGLGNDKFTP 368
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F G S ++ D T +S+GFGFV+ E+
Sbjct: 185 ARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDD-TGKSKGFGFVSFERHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA--------AMGPKLQNSYQGFVDSPHKI 218
A++A+ +G ++ GR V V + GER M YQG +
Sbjct: 244 AQKAVDDMNGKELNGRQVYVG--RAQKKGERQNELKRKFEQMKQDRMTRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL GL + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVATKPLYVALAQRK 371
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGARAREFTN----VYIKNFGEDMDDEKLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS +V+ + TG+S+GFGFV+FE ED Q A+D MNG E+ GR + + A +
Sbjct: 210 LFGNYGPALSVRVMTDD-TGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
Query: 295 R 295
+
Sbjct: 269 K 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S A LYVG+L +T + L E F+ AG + S + D +T RS G+ +V +
Sbjct: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I GR +++ + + P L+ S G I+ NL
Sbjct: 65 AERALDTMNFDVIKGRPLRIMW---------SQRDPSLRKSGVG------NIFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+GFV FET E + A++ MNG+ + R
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRPLR+ M ++R P
Sbjct: 73 NFDVIKGRPLRI-MWSQRDP 91
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +S+G+GFVT E+A +A+ F
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 110
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMGP-KLQNSYQGFVDSPHKIYAGNLGWG 226
+GS G+ +K+ E PR GG+ + K + + P K+ NL W
Sbjct: 111 NGSVFDGKKLKIEVAE-PRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIRNLPWS 169
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ A G + VI +R T S GFGFV ++ + AL+A+NG E++GR
Sbjct: 170 IAEPDQLAALFRSFGKVKHAVIPKRGTQHS-GFGFVVLRGRKNAEKALEAVNGKEIDGRT 228
Query: 287 LRLNMANERA 296
L ++ A E++
Sbjct: 229 LAVDWAVEKS 238
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A+ +++ NLP+S T +L E F + G + A +V D TDR RG FV E+A +
Sbjct: 322 ASTIFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDAISCL 381
Query: 172 R 172
R
Sbjct: 382 R 382
>gi|212412|gb|AAA48983.1| nucleolin/C23, partial [Gallus gallus]
Length = 288
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
++E K E+ L V NL Y+ + +L E+F +A ++ + R +G+ FV
Sbjct: 42 QQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATSIKMPQ----NNQGRPKGYAFV 97
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHK 217
+ E+AKEA+ + ++I GR +++ F P +G N+ GF
Sbjct: 98 EFPTAEDAKEALNSCNTTEIEGRAIRLEFSSPSWQKGN---------MNARGGFNQQSKT 148
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ L T + LR++F+G +SA+++ +R TG S+GFGFV F + ED ++A +AM
Sbjct: 149 LFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 205
Query: 278 NGVEVEGRPLRLNMA 292
E++G + L+ A
Sbjct: 206 EDGEIDGNKVTLDFA 220
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 153 SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV 212
S+G ++ + EA++A+ G+++ GR + +++ GE++ Q S +G
Sbjct: 1 SKGMAYIEFKTEREAEKALEEKQGTEVDGRAMVIDYT-----GEKSQ-----QESQKGGG 50
Query: 213 DSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
+ K + NL + + + L++ F+ + + + GR +G+ FV F TAED +
Sbjct: 51 ERESKTLIVNNLSYAASEETLQELFKKATSI----KMPQNNQGRPKGYAFVEFPTAEDAK 106
Query: 272 SALDAMNGVEVEGRPLRLNMA 292
AL++ N E+EGR +RL +
Sbjct: 107 EALNSCNTTEIEGRAIRLEFS 127
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 100 EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
+ E+ V AS AA LYVG+L +T + L + F+E T+ SA + D T +S +G+V
Sbjct: 3 DSEKDAVPAS-PAATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYV 61
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
+ S +EA AI L + S + G+ ++V + ++ G ++
Sbjct: 62 NLSSHQEAIRAIELKNHSSLNGKVIRVMWLSRDADARKSGKG---------------NVF 106
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
NL + + GL D FQ +LS+K I G+S+GFG++ F++ E A+ MNG
Sbjct: 107 VKNLAASIDNVGLHDLFQKYGNILSSK-IARSEDGKSKGFGYIQFDSEESANVAIQKMNG 165
Query: 280 VEVEGRPL---RLNMANERAPPVLPA 302
V + + + +ER+ P L A
Sbjct: 166 STVRDKQIYVGKFIRKSERSLPDLDA 191
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NL +T L E F+ G + S I D +S+GFGFV S ++A+ A+
Sbjct: 196 LYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDE-NGQSKGFGFVNYDSPDDARRAMEAM 254
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY--QGFVDSPHKIYAGNLGWGLTSQGL 232
DGSQ G + + V R ++ L + + +G IY N+ + + L
Sbjct: 255 DGSQFGSKIL-----YVARAQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEEL 309
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
RD F +LSAKV+ + G S+GFGFV F T + ++ NG
Sbjct: 310 RDHFSACGEVLSAKVMRDD-KGTSKGFGFVCFSTVVEAFKSMSCFNG 355
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIRL 173
++V NL S+ + L ++F + G + S++I R D +S+GFG++ S E A AI+
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIA--RSEDGKSKGFGYIQFDSEESANVAIQK 162
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+GS + + + V + R ER+ P L + +Y NL +T + L
Sbjct: 163 MNGSTVRDKQIYVG--KFIRKSERSL--PDLDAKFT-------NLYVKNLDPVVTEKHLG 211
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F G + + I + G+S+GFGFV +++ +D + A++AM+G + + L + A
Sbjct: 212 EKFS-SFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQ 270
Query: 294 ER 295
++
Sbjct: 271 KK 272
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A+ AIR
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQNAIRTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + + L+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARALE----FTN----IYVKNLHVDVDERCLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FE ED Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKILSVKVMRDD-SGHSRGFGFVNFEKHEDAQKAVTDMNGKEVSGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NL + L ++F++ G + S +++ D + SRGFGFV E+A++A
Sbjct: 189 EFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDD-SGHSRGFGFVNFEKHEDAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + V + V R E +++ YQG +Y NL
Sbjct: 248 VTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDEKLRKEFAPYGMITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NVFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q+A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQNAIRTMNGMLLNDR 166
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFST 121
>gi|260841407|ref|XP_002613907.1| hypothetical protein BRAFLDRAFT_268603 [Branchiostoma floridae]
gi|229299297|gb|EEN69916.1| hypothetical protein BRAFLDRAFT_268603 [Branchiostoma floridae]
Length = 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L++ NL Y+ T S+ EVF +A V I R + RS+G ++ S + +E
Sbjct: 18 DARSLFLKNLSYNSTVESVMEVFTDAVDV---RIPVYRDSGRSKGIAYLEFESEAKVEEV 74
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
DG ++ GR+V +++ G + G Q S +G + NL W TS+
Sbjct: 75 KSTMDGVEVDGRSVVMDYV----GAKAQFTGRPQQGSGRGPGTPSKTLVVRNLSWDTTSE 130
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
GL AF+G L A+VI + T RSRGFG+V FE+ E + A+D MN E++GR + +
Sbjct: 131 GLMQAFEGS---LDARVIMKPGTDRSRGFGYVDFESEEAAKEAMDDMNQSELDGRTINV 186
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NL + TS L + F G++ A ++ TDRSRGFG+V S E AKEA+
Sbjct: 118 LVVRNLSWDTTSEGLMQAFE--GSL-DARVIMKPGTDRSRGFGYVDFESEEAAKEAMDDM 174
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ S++ GRT+ V F G Y + + + NL + L +
Sbjct: 175 NQSELDGRTINVEFGTGR-----RGGGGGGGGGYGSHLQASKTLIVKNLSYDTGEDDLLE 229
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF G + A+V+ +R + RS+GFG++ F++ + + AL M+G E++GR +RL+ A
Sbjct: 230 AF---VGCIDARVVTDRESRRSKGFGYIDFDSEDAAKEALKNMDGQELDGRGIRLDFA 284
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ NL + T + + + F + ++ R +GRS+G ++ FE+ ++ M
Sbjct: 22 LFLKNLSYNSTVESVMEVF---TDAVDVRIPVYRDSGRSKGIAYLEFESEAKVEEVKSTM 78
Query: 278 NGVEVEGRPLRLNMANERA 296
+GVEV+GR + ++ +A
Sbjct: 79 DGVEVDGRSVVMDYVGAKA 97
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
++A LYVG+L ++T + L E+F G VAS + D VT RS G+ +V +V +A+ A
Sbjct: 8 QSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERA 67
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + I GR ++ + + P ++ S QG I+ NL + ++
Sbjct: 68 LDTLNYTLIKGRPCRIMW---------SHRDPSIRKSGQG------NIFIKNLDKSIDNK 112
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL--- 287
L D F +LS KV+ + G S+G+GFV +ET+E SA+ +NG + G+ +
Sbjct: 113 ALYDTFSAFGNILSCKVVTDG-KGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYVG 171
Query: 288 RLNMANERAP 297
R ER P
Sbjct: 172 RFIARKERTP 181
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y+ NL + T L F GTV SA ++ D D R F FV E A A
Sbjct: 191 IYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKD-PRDIGRQFAFVNFEDHEAAHRATEEL 249
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAGNLGWGLTSQ 230
+G ++G + V V + ER + KL+ YQG +Y NL + +
Sbjct: 250 NGRKLGDKEVYVG--RAQKKSERESFLRKLREERAQKYQGI-----NLYIKNLDDTVNDE 302
Query: 231 GLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
L F P G +++ + G SRGFGFV + ED A+ MNG V +P+ +
Sbjct: 303 ELHKLFSALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPIYV 362
Query: 290 NMANER 295
+A +
Sbjct: 363 ALAERK 368
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
+P + S + +++ NL S+ + +L + F+ G + S ++V D + S+G+GFV
Sbjct: 87 HRDPSIRKSGQG-NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVTDGKGN-SKGYGFVH 144
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--- 217
+ E A AI +G + G+ V V G A + S P K
Sbjct: 145 YETSEAADSAIAKVNGKMLNGKIVYV--------GRFIARKERTPGS------DPEKFTN 190
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
IY NLG T + L+ F G G + + V+ + R F FV FE E A + +
Sbjct: 191 IYIKNLGEAYTEEDLKRDF-GAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEEL 249
Query: 278 NGVEVEGRPLRLNMANERA 296
NG ++ + + + A +++
Sbjct: 250 NGRKLGDKEVYVGRAQKKS 268
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F +AG V A+IV DRV+ RS+G G+V
Sbjct: 184 EPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEF 243
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIY 219
+ E AI+L G ++ G + F E E+ + G +S H++Y
Sbjct: 244 KNEESVPVAIQLT-GQKLLGIPIIAQFTEA----EKNKAARNAEGHVSGNQNSIPFHRLY 298
Query: 220 AGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
GN+ + +T L++ F+ P G L + + GRSRG+GFV F + AL+ MN
Sbjct: 299 VGNIHFSITESDLQNVFE--PFGELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKMN 356
Query: 279 GVEVEGRPLRLNMANER 295
G ++ GRP+R+ + N++
Sbjct: 357 GFDLAGRPIRVGLGNDK 373
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG+L ++T L EVF+ G VAS + D +T RS G+ +V +V +A+ A+
Sbjct: 23 SASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERAL 82
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +QI G+ ++ + P ++ S G I+ NL + ++
Sbjct: 83 DTLNYTQIKGKACRIMWKH---------RDPSIRKSGAG------NIFIKNLDKTVDTRT 127
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L D F +LS KV + + SRGFGFV FETAE+ A+ +NG+ +E + L
Sbjct: 128 LHDTFSQFGNILSCKVSMDEHAN-SRGFGFVQFETAEEANEAISKVNGMLLEDKRL 182
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIRL 173
+YV N P +++ + F G + S +I+ R D S+ FGFV ++AK+
Sbjct: 205 VYVKNFPDNVSDDDFRKSFERYGEITSCKIM--RKEDGTSKCFGFVNFKEADDAKKCCEE 262
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK------IYAGNLGWGL 227
+G + G + + ER KL+ Y K +Y NL +
Sbjct: 263 MNGQKPFGGERDIYAGRAEKESERKE---KLKKKYDQIRMERLKNNQLVNLYIKNLDDTI 319
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGR-SRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ LR F+ + SAKV+ ++ S+GFGFV F E+ A+ AMNG V +P
Sbjct: 320 DDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKP 379
Query: 287 L 287
+
Sbjct: 380 I 380
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
E+E E +E+ ++ ++ ++ +++ LY+ NL ++ L + F + GT+ SA+++
Sbjct: 281 EKESERKEKLKKKYDQIRMERLKNNQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVM 340
Query: 146 YDRVTDR---SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D+ DR S+GFGFV EEA A+ +G +G + + V
Sbjct: 341 RDK--DRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKPIYV 382
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGN+ +T + LAEVFA G + +++ +GFV A AI
Sbjct: 57 VYVGNIHIKVTEALLAEVFATVGPLEGCKLI----KKEKSSYGFVDYFDHRSAAAAIITL 112
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G I G+++KVN+ G+R + I+ G+L +T L
Sbjct: 113 NGKLIFGQSIKVNWAYA--SGQRED------------TTGHYNIFVGDLSPEVTDATLYA 158
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
AF PG A+V++++ +GRSRG+GFV+F + ++ + A++ MNG + RP+R N A +
Sbjct: 159 AFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATK 218
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L F + A +++D+ + RSRG+GFV+ S +EA+ AI
Sbjct: 142 IFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEM 201
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGP------------KLQNSYQGFVDSPHK----- 217
+G +G R ++ N+ G + P ++Q + D H+
Sbjct: 202 NGKWLGSRPIRCNWATKSTGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQ 261
Query: 218 ------------IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
+Y GNL +T L F L VI + + +GFGFV +
Sbjct: 262 LDGPENNPQFTTVYVGNLAHEVTQTELHRQFHA----LGVGVIEDVRVQKEKGFGFVRYR 317
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
T E+ A+ A NG + G+ ++ + ++ P
Sbjct: 318 THEEAAYAIQAANGRVICGKSVKCSWGSKPTP 349
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 82 QDEPETEQEEEEEEEAVE---EEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
Q + E +E+ E+ A++ E P+ +YVGNL + +T + L F G
Sbjct: 244 QMKQEPNHDEQHEDGAMQLDGPENNPQFTT------VYVGNLAHEVTQTELHRQFHALGV 297
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
++ D + +GFGFV + EEA AI+ +G I G++VK ++ P
Sbjct: 298 ----GVIEDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKSVKCSWGSKP 347
>gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 459 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 514
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +IGGR +++ + PRG A P ++ L T
Sbjct: 515 EALNSCNKREIGGRAIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 561
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 562 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 618
Query: 289 LNMANER 295
L+ A +
Sbjct: 619 LDWAKPK 625
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 368 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 422
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 423 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 471
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 472 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 523
Query: 281 EVEGRPLRLNMANERAPP 298
E+ GR +RL + R P
Sbjct: 524 EIGGRAIRLELQGPRGSP 541
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 251 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 310
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 311 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 361
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 362 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 400
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 401 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 444
>gi|322695427|gb|EFY87235.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 725
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P+V +E L+V +LP ++T+ +LA+ F++ V A +V D+ T SRG+GFVT+
Sbjct: 34 KRPRV---EERRSLFVRSLPANVTNEALADFFSQHFPVKHAVVVVDQKTKESRGYGFVTL 90
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS--PHKIY 219
++A A D ++ G+ ++++ E PR AA K + G +S P K+
Sbjct: 91 ADSDDALAAKNTLDKAEWEGKRIRIDIAE-PR-KRNAANSEKTVHKKPGREESQKPPKLI 148
Query: 220 AGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDLQSALD 275
NL W + TS+ L F+ KV F + G+ RGFGFVT ++ + AL+
Sbjct: 149 VRNLPWSIKTSEQLSHLFKS-----YGKVKFADLPQSKGKLRGFGFVTIRGKKNAEKALE 203
Query: 276 AMNGVEVEGRPLRLNMA 292
+NG E++GR L ++ A
Sbjct: 204 GVNGKEIDGRTLAVDWA 220
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D ++ +++ NLP++ T L F+ G V A +V D+VT++ G GFV +AK
Sbjct: 322 TDNSSTVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKVTEKPAGTGFVCFVKQSDAK 381
Query: 169 EAIR 172
I+
Sbjct: 382 LCIK 385
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D L V LP +MT + +F+ G V S +++ D+VT +S G+GFV E+A++
Sbjct: 24 DSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSLGYGFVNYHRPEDAEK 83
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI F+G ++ +T+KV+F R A G L Y L +T
Sbjct: 84 AINTFNGLRLQNKTIKVSF---ARPSSDAIKGANL--------------YVSGLSKSMTQ 126
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG--RPL 287
Q L + F +++++++ + TG S+G GF+ F+ + + A+ +NG +G P+
Sbjct: 127 QDLENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPI 186
Query: 288 RLNMANE 294
+ AN
Sbjct: 187 TVKFANN 193
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL + L ++F G V S +++ D T++ +GFGFVTM + +EA A++
Sbjct: 257 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSL 316
Query: 175 DGSQIGGRTVKVNF 188
+G +G R ++V+F
Sbjct: 317 NGYTLGNRVLQVSF 330
>gi|156376723|ref|XP_001630508.1| predicted protein [Nematostella vectensis]
gi|156217531|gb|EDO38445.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 94 EEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
EE + + + PK +E+ +++GNL + +LA F E G A+ ++ RS
Sbjct: 349 EEFSAPKAKNPKPTDDNESMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQE--GRS 406
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV- 212
RGFG+ S E+ +A+ L +G GR +++N P + + G
Sbjct: 407 RGFGYADFTSKEDYNKALEL-NGEDCCGREIRIN----PANSKPSRGGGNTPRGGGRGRG 461
Query: 213 -----------DSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
+ P+ + NL + T+ L AF+G +AKVIF+R +G SRGFG
Sbjct: 462 GRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLGAAFEG---CSNAKVIFDRESGESRGFG 518
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
FV ++ E + L M G EV+GR +RL+ A+ R
Sbjct: 519 FVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPR 553
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
ET ++ + E E P VA +E A L+VG L +++ L + F G V A ++
Sbjct: 234 ETSKKSKTEAEETAAPTSPAVA-EEEGATLFVGRLSWNIDDDWLKKEFEHLGDVIGARVI 292
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
+R T +SRG+G+V + A++A+ G +I GR + ++ +A G + +
Sbjct: 293 MERATGKSRGYGYVDFKTKAAAEKALAEMQGKEIDGRPINLDMSTGKPHASKANAGDRAR 352
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
++ GNL + L + F ++S +V T + +GFG+V F
Sbjct: 353 QFGDSQSPPSDTLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQFS 412
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ ++ ++AL+A+NG +E RP RL+ + R
Sbjct: 413 SVDEAKAALEALNGEYIENRPCRLDFSTPR 442
>gi|70994844|ref|XP_752199.1| ribosome biogenesis (Nop4) [Aspergillus fumigatus Af293]
gi|66849833|gb|EAL90161.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus Af293]
gi|159124888|gb|EDP50005.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus A1163]
Length = 740
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +G+GFVT +E+A+ A++ F
Sbjct: 50 LFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALKEF 109
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-----------RAAMGPKLQNSYQGFVDSPHKIYAGNL 223
+GS G+T++V++ + PR E AA+ K Q Q P K+ NL
Sbjct: 110 NGSVFEGKTIRVDYAQ-PRHREIDENLGKSVPAPAALELKKQREQQKTSTQPPKLIVRNL 168
Query: 224 GWGLTS-QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + + L F+ + V + + GFGFV ++ + AL A+NG EV
Sbjct: 169 PWSIKEPEDLAVHFRSFGKV--KYVTLPKKGDKLAGFGFVVLRGKKNAEKALQAVNGKEV 226
Query: 283 EGRPLRLNMANER 295
+GR L ++ A E+
Sbjct: 227 DGRTLAVDWAVEK 239
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE L++G+L Y M + L FA G + SA+++ ++ T + G+GF+ S A+
Sbjct: 58 ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 117
Query: 169 EAIRLFDGSQIGG---RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLG 224
++ F+ + I + ++N+ + G +R DSP + I+ G+L
Sbjct: 118 RVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRD--------------DSPDYTIFVGDLA 163
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L + F+ P + AKV+ +R TGR++G+GFV F + A+ MNGV
Sbjct: 164 ADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCS 223
Query: 284 GRPLRLNMANER 295
RP+R+ A +
Sbjct: 224 TRPMRIGPAASK 235
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DRVT R++G+GFV E A+
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPK--LQNSYQGFV--DSPHK--IYAGNLGWGL 227
+G R +++ P ++ G + Q+S G + P+ ++ G L +
Sbjct: 217 MNGVPCSTRPMRIG----PAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASV 272
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T L++ F ++ K+ + GFV F + AL +NGV++ G +
Sbjct: 273 TDDHLKNVFSQYGEIVHVKIP------AGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTV 326
Query: 288 RLNMANERAP 297
RL+ R+P
Sbjct: 327 RLSWG--RSP 334
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+AA P +Q + D ++ G+L + + L F ++SAKVI + TG+
Sbjct: 46 QAAAPPSVQPTT---ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQV 102
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRP---LRLNMAN 293
G+GF+ F + + L N + P RLN A+
Sbjct: 103 EGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWAS 142
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A+ L+V NLP S + +L + F + G V S +++ D T S+ GF++ ++A
Sbjct: 177 AAKHFTNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQA 236
Query: 168 KEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFVDSPHKIYAG 221
+ A+ + +I G+ + + R E A K++ YQG +Y
Sbjct: 237 EAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGV-----NLYVK 291
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
NL + +GLR+AF+ + SAKVI + GRS+GFGFV F + E+ A+ MNG
Sbjct: 292 NLDDSIDDEGLREAFKQFGNITSAKVITD-LNGRSKGFGFVCFSSPEEATKAVTEMNGRI 350
Query: 282 VEGRPLRLNMANER 295
G+PL + +A +
Sbjct: 351 FGGKPLYVGLAQRK 364
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L + F +G V S + D VT RS G+ +V +A+ A+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + P L+ S QG ++ NL + ++ L
Sbjct: 62 TMNFDVIKGKPIRIMWSQ---------RDPSLRRSGQG------NVFIKNLDRSIDNKAL 106
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL---RL 289
D F +LS KV+ + S+GFGFV +E+ E Q A++ +NG+ +E + + R
Sbjct: 107 YDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARF 164
Query: 290 NMANERAPPVLPAAKE 305
N+R AAK
Sbjct: 165 KSRNDRMREFGDAAKH 180
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+GFGFV S E A+ AI
Sbjct: 92 VFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKV 149
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V R R + ++ + F + ++ NL + L
Sbjct: 150 NGMLMEDKKV-----FVARFKSRNDRMREFGDAAKHFTN----LFVKNLPDSWDTDALLK 200
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ ++S KVI + TG S+ GF++F+ + ++A++ M+ E+EG+ L A +
Sbjct: 201 NFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQK 260
Query: 295 RA 296
+A
Sbjct: 261 KA 262
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L D FQ +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTM 63
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + + + SID L + S+
Sbjct: 64 NFDVIKGKPIRI-MWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSS 112
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E E + + E +++E + + LYV NL S+ L E F + G +
Sbjct: 258 AQKKAERSSELKAKYEKIKQERIQRY----QGVNLYVKNLDDSIDDEGLREAFKQFGNIT 313
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ D + RS+GFGFV S EEA +A+ +G GG+ + V + R +R A
Sbjct: 314 SAKVITD-LNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ--RKEDRKA- 369
Query: 201 GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR------DAFQGQP 240
LQ Y V + ++ A +G + +Q + QGQP
Sbjct: 370 --HLQQQYMQRVSTGIRMQAF-MGNQVVNQNFQPPRYILPTMQGQP 412
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP+V D R ++V + + L F G V A+IV DRVT RS+G G+V
Sbjct: 166 EPEVTEDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKDRVTLRSKGVGYVEF 225
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E +A+ L G ++ G + E + RAA + + H++Y G
Sbjct: 226 KDEESVAKALELT-GQKLKGVPIIAQLAEAEKN--RAARPSEGGAAPGANGAPFHRLYVG 282
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFER---YTGRSRGFGFVTFETAEDLQSALDAMN 278
N+ + +T LRD F+ P +VI +R GRS+G+GFV F ++AL MN
Sbjct: 283 NIHFSVTEGDLRDIFE--PFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMN 340
Query: 279 GVEVEGRPLRLNMANERAPP 298
G E+ GR +R+ + N++ P
Sbjct: 341 GFELAGRQIRVGLGNDKFTP 360
>gi|302422442|ref|XP_003009051.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261352197|gb|EEY14625.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 300
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A++ E RLY+GNL Y+ T L E F + V S I + TDR G+ FV + +
Sbjct: 42 LASAAEGRRLYIGNLAYATTEGELKEFF-KGYLVESVSIPKNPRTDRPVGYAFVDLSTPT 100
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPR-GGERA--AMGPKLQNSYQGFVDSPHKIYAGN 222
EA+ AI G +I R V V P GE+A A P S + V S K+ N
Sbjct: 101 EAERAISELSGKEILERKVSVQLARKPEPAGEKADAANAPGAWPSRRR-VASKTKVMVAN 159
Query: 223 LGWGLTSQGLRDAFQGQ------------PGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
L + LT + L++ F+ P + K+ ++RGFGFVT + E
Sbjct: 160 LPYDLTEEKLKELFEAYSPSSAKIALRPIPRFMIKKLQARGEPRKARGFGFVTLASEELQ 219
Query: 271 QSALDAMNGVEVEGRPLRLNMA 292
Q A+ MNG E+EGR + + +A
Sbjct: 220 QKAVSEMNGKEIEGREIAVKVA 241
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G ++ A
Sbjct: 148 DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLA 207
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
I L G ++ G + V +V RAA M LQ G P ++Y G+L + +T
Sbjct: 208 IGL-SGQRLLGVPIIVQASQVMAEKNRAAAMANNLQKGNAG----PMRLYVGSLHFNITE 262
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ LR F+ + S +++ + TGRS+G+GF+TF E + ALD +NG E+ GRP+++
Sbjct: 263 EMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQLNGFELAGRPMKV 322
Query: 290 NMANER 295
ER
Sbjct: 323 GHVTER 328
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 101 EEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
EE +A++D A R L+V L ++ TS +L F E G + +++D+VT +SRG+GF+
Sbjct: 53 EEIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFI 112
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
T ++E ++A+R I GR N G +A P L S K+Y
Sbjct: 113 TFKNMESTQQALRA-PSKLIDGRLAVCNLACESLSGTSSA--PDL---------SLRKLY 160
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
G+L +TS+ L + F + V ++R T SRGFGFVT++TAE + A+D
Sbjct: 161 IGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAID 216
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 213 DSPH-KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D H K++ L W TS+ LR AFQ + VIF++ TG+SRG+GF+TF+ E Q
Sbjct: 62 DPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFITFKNMESTQ 121
Query: 272 SALDAMNGVEVEGRPLRLNMANE 294
AL A + + ++GR N+A E
Sbjct: 122 QALRAPSKL-IDGRLAVCNLACE 143
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LY+G+L +TS L FA G + + YDR T+ SRGFGFVT + E AK+AI
Sbjct: 158 KLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDD 217
Query: 174 FDGSQIGGRTVKVNFPEVPRG 194
+ +GGR + V + + +G
Sbjct: 218 VE-KMLGGRNIVVKYADSHKG 237
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIY 219
M ++EEA +AI + + I GR + VN RAA G +++ + F + + Y
Sbjct: 1 MSTIEEADKAIEMLNRYDINGRLLNVN---------RAAPRGSRVERPPRQFAPA-FRAY 50
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
GNL W + L F +++A V+++R +GRSRGFGFV+ + E+L A+ A++G
Sbjct: 51 VGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDG 110
Query: 280 VEVEGRPLRLNMANER 295
E++GRPLR+N+A ER
Sbjct: 111 QELDGRPLRVNVAAER 126
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A R YVGNLP+ + S L ++F+E G V +A +VYDR + RSRGFGFV+M S EE +AI
Sbjct: 46 AFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAI 105
Query: 172 RLFDGSQIGGRTVKVN 187
DG ++ GR ++VN
Sbjct: 106 SALDGQELDGRPLRVN 121
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + + A+ AI
Sbjct: 76 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHDAAQRAISTM 133
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G ++ F + IY NL + +GL+D
Sbjct: 134 NGMLLNDRKVFVGHFKSRRERE-AELGARVME----FTN----IYVKNLQVDVDERGLQD 184
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 185 LFSQFGKMLSVKVMRDS-SGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGRAQK 243
Query: 295 R 295
R
Sbjct: 244 R 244
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 18/193 (9%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NL + L ++F++ G + S +++ D + SRGFGFV EEA++A
Sbjct: 164 EFTNIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRDS-SGHSRGFGFVNFEKHEEAQKA 222
Query: 171 IRLFDGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGN 222
+ +G ++ GR + V E+ R E+ M N YQG +Y N
Sbjct: 223 VVHMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQ--MKQDRLNRYQGV-----NLYVKN 275
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 276 LDDSINDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIV 333
Query: 283 EGRPLRLNMANER 295
+PL + +A +
Sbjct: 334 GTKPLYVALAQRK 346
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 242 LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLP 301
+LS +V + T RS + ++ F+ D + ALD MN ++G+P+R+ M ++R P +
Sbjct: 12 ILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRI-MWSQRDPGLRK 70
Query: 302 AAKET----KTENSIDGSELLSSIST 323
+ E+SID L + ST
Sbjct: 71 SGVGNIFIKNLEDSIDNKALYDTFST 96
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P ++ H++Y G
Sbjct: 248 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPDAHSNNNQQSIPFHRLYVG 304
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + TGRS+G+GFV F + AL+ MNG
Sbjct: 305 NIHFSITESDLQNVFE--PFGELDFVQLQREETGRSKGYGFVQFRDPNQAREALEKMNGF 362
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 363 DLAGRPIRVGLGNDK 377
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGN+ +S+T S L VF G + ++ + T RS+G+GFV +A+EA+
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE-TGRSKGYGFVQFRDPNQAREALEK 358
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGFVDSPHKIYAGNLG 224
+G + GR ++V + A + +LQ QG S H N+G
Sbjct: 359 MNGFDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANVG 411
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A +AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAHQAIATM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARAME----FTN----IYVKNLHVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + G SRGFGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDD-IGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL + L ++F++ G + S +++ D + SRGFGFV EE
Sbjct: 185 ARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDI-GHSRGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERA----AMGPKLQNSYQGFVDSPHKIYA 220
A++A+ +G ++ GR + V + V R E M YQG +Y
Sbjct: 244 AQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGV-----NLYV 298
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG
Sbjct: 299 KNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 281 EVEGRPLRLNMANER 295
V +PL + +A +
Sbjct: 357 IVGTKPLYVALAQRK 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ V++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDR 166
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPVRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 109 SDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
DE R ++V L + + L F G V A+IV DRV+ RS+G G+V E
Sbjct: 241 DDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEES 300
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++AI+L G ++ G + E + + R G Q++ F H++Y GN+ +
Sbjct: 301 VQKAIQLT-GQKLLGIPIIAQLTEAEKNRQARHTEGTATQSNGIPF----HRLYVGNIHF 355
Query: 226 GLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L++ F+ P G L + + GRS+G+GFV F + AL+ MNG E+ G
Sbjct: 356 SITEDDLKNVFE--PFGELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALEKMNGFELAG 413
Query: 285 RPLRLNMANERAPP 298
RP+R+ + N++ P
Sbjct: 414 RPIRVGLGNDKFTP 427
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A +AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAHQAIATM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARAME----FTN----IYVKNLHVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + G SRGFGFV FE E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDD-IGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL + L ++F++ G + S +++ D + SRGFGFV EE
Sbjct: 185 ARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDI-GHSRGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERA----AMGPKLQNSYQGFVDSPHKIYA 220
A++A+ +G ++ GR + V + V R E M YQG +Y
Sbjct: 244 AQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGV-----NLYV 298
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG
Sbjct: 299 KNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 281 EVEGRPLRLNMANER 295
V +PL + +A +
Sbjct: 357 IVGTKPLYVALAQRK 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ V++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDR 166
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPVRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNL YS+T +SL + FAE GTV SA+++ DR + RS+GFGFV MGS EEA+ AIR
Sbjct: 4 KLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIRK 63
Query: 174 FDGSQIGGRTVKVN 187
G+ + GR + VN
Sbjct: 64 LHGASVDGRALVVN 77
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+K+Y GNL + +T L+ F + SAKV+ +R +GRS+GFGFV + E+ Q+A+
Sbjct: 3 NKLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIR 62
Query: 276 AMNGVEVEGRPLRLNMANER 295
++G V+GR L +N A R
Sbjct: 63 KLHGASVDGRALVVNEARPR 82
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
Q P+ Q ++ ++ + + D+ L+VG+L + M + L F+ G V+S
Sbjct: 77 QHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSS 136
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAA 199
+++ +++T +S G+GFV S A+E ++ + GS + + ++N+ G +RA
Sbjct: 137 VKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAV 196
Query: 200 -MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSR 257
GP L ++ G+L +T L + F + P + SAKV+ + TGRS+
Sbjct: 197 ENGPDL------------SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 244
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
G+GFV F + AL MNG R +R+ +A
Sbjct: 245 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIA 279
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAG-TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F++ +V SA++V D T RS+G+GFV G E A+
Sbjct: 204 VFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTE 263
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG-- 231
+G+ R ++V R A+ + Q+S Q + + G++G+G S G
Sbjct: 264 MNGAYCSNRQMRVGIATPKR-----AIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGES 318
Query: 232 ------------------LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
LR F ++S K+ +G GFV F + + A
Sbjct: 319 TNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDA 372
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
++++NG + +RL+ R+P
Sbjct: 373 IESLNGTVIGKNTVRLSWG--RSP 394
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A ++VG + + L + F++ G V S +I +G GFV + A++AI
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAIE 374
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+G+ IG TV++++ P R G + Y
Sbjct: 375 SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 410
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L+V NL +S++SS L +F++ GT+ S ++ + RS+GFGFV S + A A
Sbjct: 105 ANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGE--NGRSKGFGFVQFESQDSALVAQT 162
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ +GG+ K++ + + ER A P + +Y NL +T GL
Sbjct: 163 ALHDTMLGGK--KLHVCKFVKKTERTAAAP---------CEVFTNLYVKNLDETITEDGL 211
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+D F G +S+ I + G+S+ FGFV F++ +D + A+D MNG + + L + A
Sbjct: 212 KDMFS-VVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDVMNGSVIGSKTLFVGKA 270
Query: 293 NERAPPVLPAAKETK 307
++ + +E K
Sbjct: 271 QRKSERTMILKQEYK 285
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V++ E A + LYV NL ++T L ++F+ G V+S I+ D +S+ FG
Sbjct: 180 VKKTERTAAAPCEVFTNLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDH-EGKSKHFG 238
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS--- 214
FV S ++AK+A+ + +GS IG +T+ V + R ER + L+ Y+ +
Sbjct: 239 FVNFKSPDDAKKAVDVMNGSVIGSKTLFVG--KAQRKSERTMI---LKQEYKDLHNRSTE 293
Query: 215 ---PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
+Y NL + + L++ F +LS KVI G S+ FGFV F + E+
Sbjct: 294 KLRASNLYVKNLNVDIDDKKLKEVFSAYGKILSVKVICHN-DGTSKQFGFVCFASPEEAN 352
Query: 272 SALDAMNG 279
AL A+NG
Sbjct: 353 KALVALNG 360
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L F G ++S + R+T +S + +V + S +A A+
Sbjct: 17 ASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALG 76
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L + + + G+ +++ + +R K GF + ++ NL + ++S L
Sbjct: 77 LLNHTNLKGKPMRIMWC------QRDPFARK-----TGFAN----LFVKNLDFSISSSCL 121
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
F +LS KV E GRS+GFGFV FE+ + A A++ + G+ L +
Sbjct: 122 ESIFSKYGTILSCKVAGE--NGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHV 176
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 15/193 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++ +LP S T+ SLAE F+++ + A +V D T +S+G+GFVT VE+AK A+
Sbjct: 39 LFIRSLPASATNESLAEHFSQSYVIKHAVVVVDPKTKQSKGYGFVTFADVEDAKAALEEL 98
Query: 175 DGSQIGGRTVKVNFPEVPRG-------GERA----AMGPKLQNSYQGFVDSPHKIYAGNL 223
+GS G+ +KV + + PR G+ A+ K Q Q P K+ NL
Sbjct: 99 NGSTFEGKKIKVEYAQ-PRHRVVDETVGKSVPSAEALERKKQREQQKADTQPPKLIVRNL 157
Query: 224 GWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + T + L F+ + V + + GFGFV ++ + AL+A+NG EV
Sbjct: 158 PWSIKTPEDLAAHFRSFGKV--KYVTLPKKGSQLAGFGFVVLRGKKNAEKALEAVNGKEV 215
Query: 283 EGRPLRLNMANER 295
+GR L ++ A E+
Sbjct: 216 DGRTLAVDWAVEK 228
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 27/237 (11%)
Query: 69 SASFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSS 128
S + G D PE + E + E+E + + ++V L + +
Sbjct: 144 SDRYSGDHRRAKDDDRPEASSKREATPQLTEDERDRRT--------VFVQQLAARLRTRD 195
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L F + G V A+IV DR++ RS+G G+V + + +A++L G ++ G + V
Sbjct: 196 LKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNEDSVTQALQLT-GQKLLGIPIIVQM 254
Query: 189 PEVP-----RGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-G 241
E R E A P NS P H++Y GN+ + +T Q L+ F+ P G
Sbjct: 255 TEAEKNRQVRTTETTAAHP---NSI------PFHRLYVGNIHFNVTEQDLQAVFE--PFG 303
Query: 242 LLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
L + + GRSRG+GFV + A + AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 304 ELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTP 360
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A LYVG +P S+T ++F G V A + R + +G V + A A
Sbjct: 684 DMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAA 737
Query: 171 IRLFDGSQIGGRTVKVNFPEVP--RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
I DG QIGG + V +P + A+ ++ ++ QG +D + +Y +L +
Sbjct: 738 IDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN-LYVSHLPSYVN 796
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
++ L D F + AKV+ ERYTG S+GFGFV F A AL MNG ++G L
Sbjct: 797 NERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 856
Query: 289 LNMA 292
+ +A
Sbjct: 857 VRIA 860
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLP S+ S L E+F G + + +V D T S+G+GFV A EAI+
Sbjct: 295 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 354
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + G +KV P E + P + K+Y NL + + L
Sbjct: 355 NGRLVEGTALKVRVTGFP-SSEDNSQQPSKETDMA-------KLYVCNLSLSMNTDRLIH 406
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + +AKV + TG S+G+GFV + + A+ +NG V+GR + + ++
Sbjct: 407 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG- 465
Query: 295 RAPPVLP 301
P LP
Sbjct: 466 -IPSTLP 471
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A+LYV NL SM + L +F G V +A++ D T S+G+GFV S A EA
Sbjct: 386 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 445
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSP-----------HKI 218
+ +G + GR ++V +P +A+ P + V+SP +
Sbjct: 446 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESP--STTRNSAVESPSTTRTVKEIDMSNL 503
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y N+ + ++ L + F + A+V+ + T ++G+GF+ F +E A+ AMN
Sbjct: 504 YVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMN 563
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTEN 310
G V G + + +A + A + T+ N
Sbjct: 564 GALVGGEMIIVRVAGLSPSASISAVQTTQDIN 595
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
AVE + + + LYV N+P S+ + L E+F G + A +V D T ++G+
Sbjct: 485 AVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 544
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
GF+ E A +AI +G+ +GG + V + +A+ + Q S
Sbjct: 545 GFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAV-----QTTQDINKS-- 597
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y NL +T+ + + F P KV+ + + V + A A+
Sbjct: 598 RLYITNLPRSMTADKMVNLF--APFGQITKVLM------NLEYSLVWYADAPSATKAVQH 649
Query: 277 MNGVEVEGRPL 287
M+G VEG+ L
Sbjct: 650 MDGYMVEGKRL 660
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV +LP + + L ++F G + A++V +R T S+GFGFV A A
Sbjct: 782 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 841
Query: 171 IRLFDGSQIGGRTVKVNFPEV 191
+ +G + G ++V V
Sbjct: 842 LTHMNGYPLDGHVLEVRIAGV 862
>gi|226222462|gb|ACO38649.1| nucleolin-like protein [Rattus norvegicus]
Length = 569
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 341 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 396
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 397 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 443
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 444 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKTAKEAMEDGEIDGNKVT 500
Query: 289 LNMA 292
L+ A
Sbjct: 501 LDWA 504
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 251 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 305
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 306 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 359
Query: 231 GLRDAFQGQPGLLSAKVIFERY----TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 360 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 411
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 412 IRLELQGPRGSP 423
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 44/191 (23%)
Query: 115 LYVGNLPYSMT--SSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
L++GNL S+ +++++FA+ A D T +R FG+V S E+ ++A+
Sbjct: 171 LFIGNLNKSVAELKVAISDLFAKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALE 225
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L G ++ G +K+ E P+G ++S + V + + A NL + +T L
Sbjct: 226 L-TGLKVFGNEIKL---EKPKG----------RDSKK--VRAARTLLAKNLSFNITEDEL 269
Query: 233 RDAFQGQPGLLSAKVIFERYT--------GRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
++ +FE GRS+G ++ F++ D + L+ G E++G
Sbjct: 270 KE-------------VFEDAVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDG 316
Query: 285 RPLRLNMANER 295
R + L E+
Sbjct: 317 RSVSLYYTGEK 327
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 103 EPKVAASDE---AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
EP+ S E A ++ L + S L + F+ G V I+ DR + RS+G +V
Sbjct: 137 EPETILSPEERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 196
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIY 219
++ AI L G ++ G + V + + AAM LQ G P ++Y
Sbjct: 197 EFCDIQSVPLAIGL-TGQRLLGVPIIVQVSQAEKN-RLAAMSNNLQRGNPG----PMRLY 250
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L + +T LR F+ + + +++ E TGRS+GFGF+TF AE + AL+ +NG
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNG 310
Query: 280 VEVEGRPLRL 289
E+ GRP+++
Sbjct: 311 FELAGRPMKV 320
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A LYVG +P S+T ++F G V A + R + +G V + A A
Sbjct: 687 DMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAA 740
Query: 171 IRLFDGSQIGGRTVKVNFPEVP--RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
I DG QIGG + V +P + A+ ++ ++ QG +D + +Y +L +
Sbjct: 741 IDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN-LYVSHLPSYVN 799
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
++ L D F + AKV+ ERYTG S+GFGFV F A AL MNG ++G L
Sbjct: 800 NERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 859
Query: 289 LNMA 292
+ +A
Sbjct: 860 VRIA 863
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLP S+ S L E+F G + + +V D T S+G+GFV A EAI+
Sbjct: 298 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 357
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + GR ++V P E + P + K+Y NL + + L
Sbjct: 358 NGRLVEGRALEVRVAGFP-SSEDNSQQPSKETDMA-------KLYVCNLSLSMNTDRLIH 409
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + +AKV + TG S+G+GFV + + A+ +NG V+GR + + ++
Sbjct: 410 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG- 468
Query: 295 RAPPVLP 301
P LP
Sbjct: 469 -IPSTLP 474
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A+LYV NL SM + L +F G V +A++ D T S+G+GFV S A EA
Sbjct: 389 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 448
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSP-----------HKI 218
+ +G + GR ++V +P +A+ P + V+SP +
Sbjct: 449 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESP--STTRNSAVESPSTTRTVKEIDMSNL 506
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y N+ + ++ L + F + A+V+ + T ++G+GF+ F +E A+ AMN
Sbjct: 507 YVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMN 566
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTEN 310
G V G + + +A + A + T+ N
Sbjct: 567 GALVGGEMIIVRVAGLSPSASISAVQTTQDIN 598
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
AVE + + + LYV N+P S+ + L E+F G + A +V D T ++G+
Sbjct: 488 AVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 547
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
GF+ E A +AI +G+ +GG + V + +A+ + Q S
Sbjct: 548 GFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAV-----QTTQDINKS-- 600
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y NL +T+ + + F P KV+ + + V + A A+
Sbjct: 601 RLYITNLPRSMTADKMVNLF--APFGQITKVLM------NLEYSLVWYADAPSATKAVQH 652
Query: 277 MNGVEVEGRPL 287
M+G VEG+ L
Sbjct: 653 MDGYMVEGKRL 663
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV +LP + + L ++F G + A++V +R T S+GFGFV A A
Sbjct: 785 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 844
Query: 171 IRLFDGSQIGGRTVKVNFPEV 191
+ +G + G ++V V
Sbjct: 845 LTHMNGYPLDGHVLEVRIAGV 865
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +YVG+L + L F E G++AS + DRVT S +G+V S ++A AI+
Sbjct: 12 ASIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQQDAIRAIK 71
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L + S + G+ ++V + ++ G ++ NL + + GL
Sbjct: 72 LRNNSYLNGKVIRVMWLHRDPNARKSGRG---------------NVFVKNLAGSIDNAGL 116
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D F+ +LS+KV+ G+S+G+GFV FE E +A++ +NG V + + +
Sbjct: 117 HDLFKKYGNILSSKVVMSE-DGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVGKF 175
Query: 293 NERAPPVLP 301
+ +LP
Sbjct: 176 VRKGDRILP 184
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 13/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S+ ++ L ++F + G + S+++V +S+G+GFV E A AI
Sbjct: 102 VFVKNLAGSIDNAGLHDLFKKYGNILSSKVVMSE-DGKSKGYGFVQFEWEESANNAIEKL 160
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+GS +G + + V + R G+R G + + +Y NL +T L++
Sbjct: 161 NGSTVGNKQIYVG--KFVRKGDRILPGYDAKYT---------NLYIKNLDSDITEALLQE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F ++S I + G S+GF FV +E +D + A++AMNG++ + L + A +
Sbjct: 210 KFSSFGKIISL-AISKDDNGLSKGFAFVNYENPDDAKKAMEAMNGLQFGSKYLYVARAQK 268
Query: 295 RA 296
+A
Sbjct: 269 KA 270
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+ NL +T + L E F+ G + S I D S+GF FV + ++AK+A+
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDD-NGLSKGFAFVNYENPDDAKKAMEAM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY------QGFVDSPHKIYAGNLGWGLT 228
+G Q G + + V R ++A L + Q +Y N+ +T
Sbjct: 252 NGLQFGSK-----YLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVT 306
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LRD F + S KV+ + G S+GFGFV F E+ A+ + NG +PL
Sbjct: 307 DKELRDLFSSCGTITSVKVMRDD-KGISKGFGFVCFSNPEEANKAVMSFNGCTFHRKPLY 365
Query: 289 LNMANERAPPVLPAAKETKTE 309
+ +A + KE KT+
Sbjct: 366 IAIAQRK--------KERKTQ 378
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E EQ + E +E+ K AS+ LYV N+ +T L ++F+ GT+
Sbjct: 266 AQKKAEREQILHRQFEEKRKEQILKYQASN----LYVKNIDDDVTDKELRDLFSSCGTIT 321
Query: 141 SAEIVYDRVTDR--SRGFGFVTMGSVEEAKEAIRLFDGS 177
S +++ D D+ S+GFGFV + EEA +A+ F+G
Sbjct: 322 SVKVMRD---DKGISKGFGFVCFSNPEEANKAVMSFNGC 357
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F++ G S ++ D + +S+GFGFV+ E+
Sbjct: 185 ARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDE-SGKSKGFGFVSFERHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA--------AMGPKLQNSYQGFVDSPHKI 218
A++A+ +G ++ GR V V + GER M YQG +
Sbjct: 244 AQKAVDEMNGKELNGRQVYVG--RAQKKGERQNELKRKFEQMKQDRMTRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL GL + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVATKPLYVALAQRK 371
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGARAREFTN----VYIKNFGEDMDDEKLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS +V+ + +G+S+GFGFV+FE ED Q A+D MNG E+ GR + + A +
Sbjct: 210 LFSKYGPALSIRVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQK 268
Query: 295 R 295
+
Sbjct: 269 K 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S A LYVG+L +T + L E F+ AG + S + D +T RS G+ +V +
Sbjct: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I GR +++ + + P L+ S G I+ NL
Sbjct: 65 AERALDTMNFDVIKGRPLRIMW---------SQRDPSLRKSGVG------NIFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+GFV FET E + A++ MNG+ + R
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRPLR+ M ++R P
Sbjct: 73 NFDVIKGRPLRI-MWSQRDP 91
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG L ++T + L E+F G VAS + D VT RS G+ +V + + + A+
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ S I GR ++ + + P L+ + QG I+ NL G+ ++ L D
Sbjct: 110 NYSLIKGRACRIMW---------SQRDPALRKTGQG------NIFIKNLDEGIDNKALHD 154
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F +LS KV + + GRS+G+GFV +ETAE +A+ A+NG+
Sbjct: 155 TFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAADTAIKAVNGM 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + + +L + FA G V S ++ D RS+G+GFV + E A AI+
Sbjct: 138 IFIKNLDEGIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAADTAIKAV 196
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V P + R ER + K++ F + +Y N+ +T + R
Sbjct: 197 NGMLLNDKKVYVG-PHISRK-ERQS---KIEEMKAQFTN----VYVKNIDAEVTDEEFRQ 247
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ Q G +++ VI GRS+GFGFV FE E+ Q +++++ E+ G+ L + A +
Sbjct: 248 LFE-QFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQK 306
Query: 295 RA 296
+A
Sbjct: 307 KA 308
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ +T ++F + G V SA I D RS+GFGFV EEA++ +
Sbjct: 231 VYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDE-EGRSKGFGFVNFEKHEEAQKGVESL 289
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG------NLGWGLT 228
++ G+ + V R ++A +L+ SY+ + Y G NL +
Sbjct: 290 HDFELNGKKLFVT-----RAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVD 344
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR F+ + SAKV+ + G S+GFGFV F + ++ A+ MN + +PL
Sbjct: 345 DERLRQEFEPFGTITSAKVMRDE-KGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 403
Query: 289 LNMANER 295
+++A R
Sbjct: 404 VSLAQRR 410
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
+ EEE ++ E+ + K++ + LY+ NL + L + F GT+ SA+++ D
Sbjct: 309 EREEELRKSYEQAKNEKLSKY-QGVNLYIKNLEDEVDDERLRQEFEPFGTITSAKVMRDE 367
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
S+GFGFV S +EA +A+ + IG + + V+
Sbjct: 368 -KGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 406
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 12/193 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
EA ++V L +T+ L F + TV + IV DR++ RS+G G+V SVE
Sbjct: 291 EARSVFVSQLAARLTARDLGYFFEDKLGENTVMDSRIVTDRISRRSKGIGYVEFRSVELV 350
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSPH---KIYAGNL 223
+AI L G+ + G +++ E ER + P N + V +PH ++Y G+L
Sbjct: 351 DKAIAL-SGTVVMGLPIQIQHTEA----ERNRLHPGDGNLNLPPGVSAPHGGMQLYVGSL 405
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ L+ ++ F+ L + + TGRS+G+ FV ++ AED + AL+ M+G E+
Sbjct: 406 HFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQMDGFELA 465
Query: 284 GRPLRLNMANERA 296
GR LR+N +E+
Sbjct: 466 GRTLRVNTVHEKG 478
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P V+A +LYVG+L ++++ S + +VF G + ++ D VT RS+G+ FV
Sbjct: 389 PGVSAPHGGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKR 448
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVN 187
E+AK A+ DG ++ GRT++VN
Sbjct: 449 AEDAKMALEQMDGFELAGRTLRVN 472
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L + + L E F + G V A+IV DR++ RS+G G+V + A++L
Sbjct: 172 VFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKDEDSVATALQL- 230
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLR 233
G ++ G V V E + R A + + V P H++Y GN+ + +T + LR
Sbjct: 231 TGQKLLGIPVIVQVTEAEKN--RQARNTEAGGPHPNHV--PFHRLYVGNIHFNVTEEDLR 286
Query: 234 DAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F+ P G L + + + RSRG+GFV F A + AL+ MNG ++ GRP+R+ +
Sbjct: 287 AVFE--PFGELEFVQLQKDESDRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGLG 344
Query: 293 NERAPP 298
N++ P
Sbjct: 345 NDKFTP 350
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L Y M + L F +G V + +++ +R + S G+GFV S A++A++ F
Sbjct: 111 IWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQNF 170
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + R K+N+ G +R + S H I+ G+L +T + L
Sbjct: 171 SGHVMPNTDRAFKLNWASYSMGEKRTEL------------SSDHSIFVGDLAVDVTDEML 218
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + + AKVI + TGRSRG+GFV F D A+ MNGV RP+R+
Sbjct: 219 LELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGP 278
Query: 292 ANER 295
A R
Sbjct: 279 ATPR 282
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E+F+ + +V A+++ D T RSRG+GFV G + A+
Sbjct: 204 IFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTE 263
Query: 174 FDGSQIGGRTVKVNFPEVPR--GGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQ 230
+G R ++V P PR G+ + P+ Q VDS ++ +Y G L ++
Sbjct: 264 MNGVYCSTRPIRVG-PATPRRSQGDSGSSPPR-----QSDVDSTNRTVYVGGLDPNVSED 317
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR AF L S K+ F + G FV F D + AL +NG + + +RL+
Sbjct: 318 ELRKAFAKYGDLASVKIPFGKQCG------FVQFVNRADAEEALQGLNGATIGKQAVRLS 371
Query: 291 MANERAPPVLPAAKETKTE 309
PA+K+++ +
Sbjct: 372 WGRS------PASKQSRGD 384
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVAS 141
Q P+ Q ++ ++ + + D+ L+VG+L + M + L F+ G V+S
Sbjct: 34 QHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSS 93
Query: 142 AEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAA 199
+++ +++T +S G+GFV S A+E ++ + GS + + ++N+ G +RA
Sbjct: 94 VKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAV 153
Query: 200 -MGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSR 257
GP L ++ G+L +T L + F + P + SAKV+ + TGRS+
Sbjct: 154 ENGPDL------------SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 201
Query: 258 GFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
G+GFV F + AL MNG R +R+ +A
Sbjct: 202 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIA 236
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAG-TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F++ +V SA++V D T RS+G+GFV G E A+
Sbjct: 161 VFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTE 220
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG-- 231
+G+ R ++V R A+ + Q+S Q + + G++G+G S G
Sbjct: 221 MNGAYCSNRQMRVGIATPKR-----AIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGES 275
Query: 232 ------------------LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
LR F ++S K+ +G GFV F + + A
Sbjct: 276 TNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDA 329
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
++++NG + +RL+ R+P
Sbjct: 330 IESLNGTVIGKNTVRLSWG--RSP 351
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A ++VG + + L + F++ G V S +I +G GFV + A++AI
Sbjct: 278 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAIE 331
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+G+ IG TV++++ P R G + Y
Sbjct: 332 SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 367
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 84 EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+P + E +EE+ EE K S E A ++VG L +++ L F G V SA
Sbjct: 210 KPSKRKAEVDEEQ---EESSKKAKLSGEPATIFVGRLSWNIDDQWLKNEFEHIGGVQSAR 266
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++Y+R + RSRG+G+V A++A++ G ++ GR + + + + P+
Sbjct: 267 VIYERGSTRSRGYGYVDFTDKSYAEKAVKEMHGKELDGRPINCDMST-----SKPTVNPR 321
Query: 204 LQNSYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGF 259
++ + F D P + ++ GNL + + + F ++S ++ T + +GF
Sbjct: 322 -EDRAKRFGDMPSEPSDTLFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGF 380
Query: 260 GFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
G+V + + + Q AL+ + G ++ RP+RL+ +
Sbjct: 381 GYVQYASVDSAQKALETLQGEYIDNRPVRLDFS 413
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P I+ G L W + Q L++ F+ G+ SA+VI+ER + RSRG+G+V F + A+
Sbjct: 235 PATIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAV 294
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLP 301
M+G E++GRP+ +M+ + P V P
Sbjct: 295 KEMHGKELDGRPINCDMSTSK-PTVNP 320
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A LYVG +P S+T ++F G V A + R + +G V + A A
Sbjct: 600 DMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAA 653
Query: 171 IRLFDGSQIGGRTVKVNFPEVP--RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
I DG QIGG + V +P + A+ ++ ++ QG +D + +Y +L +
Sbjct: 654 IDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN-LYVSHLPSYVN 712
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
++ L D F + AKV+ ERYTG S+GFGFV F A AL MNG ++G L
Sbjct: 713 NERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 772
Query: 289 LNMA 292
+ +A
Sbjct: 773 VRIA 776
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLP S+ S L E+F G + + +V D T S+G+GFV A EAI+
Sbjct: 211 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 270
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + G +KV P E + P + K+Y NL + + L
Sbjct: 271 NGRLVEGTALKVRVTGFP-SSEDNSQQPSKETDMA-------KLYVCNLSLSMNTDRLIH 322
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + +AKV + TG S+G+GFV + + A+ +NG V+GR + + ++
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG- 381
Query: 295 RAPPVLP 301
P LP
Sbjct: 382 -IPSTLP 387
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A+LYV NL SM + L +F G V +A++ D T S+G+GFV S A EA
Sbjct: 302 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 361
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSP-----------HKI 218
+ +G + GR ++V +P +A+ P + V+SP +
Sbjct: 362 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESP--STTRNSAVESPSTTRTVKEIDMSNL 419
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y N+ + ++ L + F + A+V+ + T ++G+GF+ F +E A+ AMN
Sbjct: 420 YVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMN 479
Query: 279 GVEVEGRPLRLNMANERAPPVLPAAKETKTEN 310
G V G + + +A + A + T+ N
Sbjct: 480 GALVGGEMIIVRVAGLSPSASISAVQTTQDIN 511
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
AVE + + + LYV N+P S+ + L E+F G + A +V D T ++G+
Sbjct: 401 AVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 460
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
GF+ E A +AI +G+ +GG + V + +A+ + Q S
Sbjct: 461 GFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAV-----QTTQDINKS-- 513
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y NL +T+ + + F P KV+ + + V + A A+
Sbjct: 514 RLYITNLPRSMTADKMVNLF--APFGQITKVLM------NLEYSLVWYADAPSATKAVQH 565
Query: 277 MNGVEVEGRPL 287
M+G VEG+ L
Sbjct: 566 MDGYMVEGKRL 576
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV +LP + + L ++F G + A++V +R T S+GFGFV A A
Sbjct: 698 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 757
Query: 171 IRLFDGSQIGGRTVKVNFPEV 191
+ +G + G ++V V
Sbjct: 758 LTHMNGYPLDGHVLEVRIAGV 778
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E A L+VG L +++ L F G V SA ++ +R T +SRG+G+V S A++A
Sbjct: 1 EPATLFVGRLSWNIDDEWLRREFEPLGGVISARVIMERATGKSRGYGYVDFDSKSAAEKA 60
Query: 171 IRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSP----HKIYAGN 222
+ + G ++ GR + ++ P V + E N + + D+P ++ GN
Sbjct: 61 LNEYQGRELDGRPINLDMSTGKPHVTKSTE---------NRAKQYGDTPSAPSDTLFIGN 111
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + L + F ++S ++ T + +GFG+V F + ++ ++A++A+NG +
Sbjct: 112 LSFNADRDNLFNIFGVHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAAMEALNGEYI 171
Query: 283 EGRPLRLNMANERAP 297
EGR RL+ + + P
Sbjct: 172 EGRACRLDFSTPKDP 186
>gi|387050|gb|AAA36966.1| nucleolin, C23, partial [Cricetulus griseus]
Length = 679
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 447 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQQGKSKGYAFIEFASFEDAK 502
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 503 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 549
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 550 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 606
Query: 289 LNMANER 295
L+ A +
Sbjct: 607 LDWAKPK 613
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI +S+G ++ S +A++
Sbjct: 357 AARTLLAKNLSFNITEDELKEVFEDA-----LEIRLVSQDGKSKGIAYIEFKSEADAEKN 411
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 412 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 465
Query: 231 GLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 466 TLQEVFE--------KATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 517
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 518 IRLELQGPRGSP 529
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 98/203 (48%), Gaps = 31/203 (15%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
P ++E +++ V E ++ KV S+ L++GNL + + + L +E A
Sbjct: 243 PGKRKKEMTKQKEVPEAKKQKVEGSESTTPFNLFIGNLNPNKSVAELKVAISEP--FAKN 300
Query: 143 EI-VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG 201
++ V D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 301 DLAVVDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKG------- 349
Query: 202 PKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
++S + V + + A NL + +T L++ F+ L +++ + G+S+G +
Sbjct: 350 ---RDSKK--VRAARTLLAKNLSFNITEDELKEVFED---ALEIRLVSQ--DGKSKGIAY 399
Query: 262 VTFETAEDLQSALDAMNGVEVEG 284
+ F++ D + L+ E +G
Sbjct: 400 IEFKSEADAEKNLE-----EKQG 417
>gi|128842|sp|P08199.2|NUCL_MESAU RecName: Full=Nucleolin; AltName: Full=Protein C23
Length = 714
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQQGKSKGYAFIEFASFEDAK 537
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 538 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 584
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 585 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 641
Query: 289 LNMANER 295
L+ A +
Sbjct: 642 LDWAKPK 648
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI +S+G ++ S +A++
Sbjct: 392 AARTLLAKNLSFNITEDELKEVFEDA-----LEIRLVSQDGKSKGIAYIEFKSEADAEKN 446
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 447 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 500
Query: 231 GLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 501 TLQEVFE--------KATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 552
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 553 IRLELQGPRGSP 564
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 98/203 (48%), Gaps = 31/203 (15%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASA 142
P ++E +++ V E ++ KV S+ L++GNL + + + L +E A
Sbjct: 278 PGKRKKEMTKQKEVPEAKKQKVEGSESTTPFNLFIGNLNPNKSVAELKVAISEP--FAKN 335
Query: 143 EI-VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMG 201
++ V D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 336 DLAVVDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKG------- 384
Query: 202 PKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGF 261
++S + V + + A NL + +T L++ F+ L +++ + G+S+G +
Sbjct: 385 ---RDSKK--VRAARTLLAKNLSFNITEDELKEVFED---ALEIRLVSQ--DGKSKGIAY 434
Query: 262 VTFETAEDLQSALDAMNGVEVEG 284
+ F++ D + L+ E +G
Sbjct: 435 IEFKSEADAEKNLE-----EKQG 452
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQQAISTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R ER A +L F + IY NL + +GL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRR--EREA---ELGARATAFTN----IYVKNLPGHVDERGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FE E+ Q A+ MNG++V GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQK 268
Query: 295 R 295
R
Sbjct: 269 R 269
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NLP + L ++F++ G + S +++ D + SRGFGFV EEA++A+
Sbjct: 193 IYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQGL 232
+G Q+ GR + V + RG + + + +++ Q ++ +Y NL + + L
Sbjct: 252 NGMQVSGRLLYVGRAQ-KRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKL 310
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R F + SAKV+ E G S+GFGFV F + E+ A+ MNG + +PL + +A
Sbjct: 311 RKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALA 368
Query: 293 NER 295
+
Sbjct: 369 QRK 371
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NVFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDR 166
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFST 121
>gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA_b [Rattus norvegicus]
Length = 698
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 470 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 525
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 526 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 572
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 573 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 629
Query: 289 LNMANER 295
L+ A +
Sbjct: 630 LDWAKPK 636
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 380 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 434
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 435 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 488
Query: 231 GLRDAFQGQPGLLSAKVIFERYT----GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 489 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 540
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 541 IRLELQGPRGSP 552
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 104 PKVAASDEAAR--------------------------LYVGNLPYSMTSSSL----AEVF 133
P AA + + L++GNL + + + L +E+F
Sbjct: 261 PVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELF 320
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A+ A D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+
Sbjct: 321 AKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPK 371
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
G ++S + V + + A NL + +T L++ F+ + ++
Sbjct: 372 G----------RDSKK--VRAARTLLAKNLSFNITEDELKEVFED-----AVEIRLVSQD 414
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GRS+G ++ F++ D + L+ G E++GR + L E+
Sbjct: 415 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 456
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)
Query: 100 EEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+E+ P++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+
Sbjct: 162 KEKSPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGY 221
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
V S E AI+L G ++ G + E + R A P+ + + H++
Sbjct: 222 VEFKSEESVAPAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEASSGHN-HAAPFHRL 277
Query: 219 YAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
Y GN+ + +T L++ F+ P G L + + TGRSRG+GFV F + AL+ M
Sbjct: 278 YVGNIHFSITENDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKM 335
Query: 278 NGVEVEGRPLRLNMANERAPP 298
NG ++ GR +R+ + N++ P
Sbjct: 336 NGFDLAGRAIRVGLGNDKFTP 356
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A LYVG +P S+T ++F G V A + R + +G V + A A
Sbjct: 677 DMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAA 730
Query: 171 IRLFDGSQIGGRTVKVNFPEVP--RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
I DG QIGG + V +P + A+ ++ ++ QG +D + +Y +L +
Sbjct: 731 IDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN-LYVSHLPSYVN 789
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
++ L D F + AKV+ ERYTG S+GFGFV F A AL MNG ++G L
Sbjct: 790 NERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 849
Query: 289 LNMA 292
+ +A
Sbjct: 850 VRIA 853
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLP S+ S L E+F G + + +V D T S+G+GFV A EAI+
Sbjct: 299 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 358
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + GR ++V P E + P + K+Y NL + + L
Sbjct: 359 NGRLVEGRALEVRVAGFP-SSEDNSQQPSKETDMA-------KLYVCNLSLSMNTDRLIH 410
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + +AKV + TG S+G+GFV + + A+ +NG V+GR + + ++
Sbjct: 411 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG- 469
Query: 295 RAPPVLP-----AAKETKTENSIDGSELL-----SSIST 323
P LP + T+T ID S L SSI T
Sbjct: 470 -IPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDT 507
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A+LYV NL SM + L +F G V +A++ D T S+G+GFV S A EA
Sbjct: 390 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 449
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +G + GR ++V +P +A+ P + + S +Y N+ + +
Sbjct: 450 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMS--NLYVCNMPSSIDT 507
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ L + F + A+V+ + T ++G+GF+ F +E A+ AMNG V G + +
Sbjct: 508 KKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV 567
Query: 290 NMANERAPPVLPAAKETKTEN 310
+A + A + T+ N
Sbjct: 568 RVAGLSPSASISAVQTTQDIN 588
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
AVE + + + LYV N+P S+ + L E+F G + A +V D T ++G+
Sbjct: 478 AVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 537
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
GF+ E A +AI +G+ +GG + V + +A+ + Q S
Sbjct: 538 GFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAV-----QTTQDINKS-- 590
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y NL +T+ + + F P KV+ + + V + A A+
Sbjct: 591 RLYITNLPRSMTADKMVNLF--APFGQITKVLM------NLEYSLVWYADAPSAIKAVQH 642
Query: 277 MNGVEVEGRPL 287
M+G VEG+ L
Sbjct: 643 MDGYMVEGKRL 653
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV +LP + + L ++F G + A++V +R T S+GFGFV A A
Sbjct: 775 DMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVA 834
Query: 171 IRLFDGSQIGGRTVKVNFPEV 191
+ +G + G ++V V
Sbjct: 835 LTHMNGYPLDGHVLEVRIAGV 855
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A LYVG +P S+T ++F G V A + R + +G V + A A
Sbjct: 589 DMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAA 642
Query: 171 IRLFDGSQIGGRTVKVNFPEVP--RGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
I DG QIGG + V +P + A+ ++ ++ QG +D + +Y +L +
Sbjct: 643 IDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN-LYVSHLPSYVN 701
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
++ L D F + AKV+ ERYTG S+GFGFV F A AL MNG ++G L
Sbjct: 702 NERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLE 761
Query: 289 LNMA 292
+ +A
Sbjct: 762 VRIA 765
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNLP S+ S L E+F G + + +V D T S+G+GFV A EAI+
Sbjct: 211 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 270
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + GR ++V P E + P + K+Y NL + + L
Sbjct: 271 NGRLVEGRALEVRVAGFP-SSEDNSQQPSKETDMA-------KLYVCNLSLSMNTDRLIH 322
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + +AKV + TG S+G+GFV + + A+ +NG V+GR + + ++
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSG- 381
Query: 295 RAPPVLP-----AAKETKTENSIDGSELL-----SSIST 323
P LP + T+T ID S L SSI T
Sbjct: 382 -IPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDT 419
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ A+LYV NL SM + L +F G V +A++ D T S+G+GFV S A EA
Sbjct: 302 DMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEA 361
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAM-GPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +G + GR ++V +P +A+ P + + S +Y N+ + +
Sbjct: 362 VIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMS--NLYVCNMPSSIDT 419
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ L + F + A+V+ + T ++G+GF+ F +E A+ AMNG V G + +
Sbjct: 420 KKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV 479
Query: 290 NMANERAPPVLPAAKETKTEN 310
+A + A + T+ N
Sbjct: 480 RVAGLSPSASISAVQTTQDIN 500
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
AVE + + + LYV N+P S+ + L E+F G + A +V D T ++G+
Sbjct: 390 AVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGY 449
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
GF+ E A +AI +G+ +GG + V + +A+ + Q S
Sbjct: 450 GFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAV-----QTTQDINKS-- 502
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++Y NL +T+ + + F P KV+ + + V + A A+
Sbjct: 503 RLYITNLPRSMTADKMVNLF--APFGQITKVLM------NLEYSLVWYADAPSAIKAVQH 554
Query: 277 MNGVEVEGRPL 287
M+G VEG+ L
Sbjct: 555 MDGYMVEGKRL 565
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV +LP + + L ++F G + A++V +R T S+GFGFV A A+
Sbjct: 691 LYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHM 750
Query: 175 DGSQIGGRTVKVNFPEV 191
+G + G ++V V
Sbjct: 751 NGYPLDGHVLEVRIAGV 767
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F++ G S ++ D + +S+GFGFV+ E+
Sbjct: 172 ARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDD-SGKSKGFGFVSFERHED 230
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA--------AMGPKLQNSYQGFVDSPHKI 218
A++A+ +G ++ GR V V + GER M YQG +
Sbjct: 231 AQKAVDDMNGKELNGRQVYVG--RAQKKGERQNELKRKFEQMKQDRMTRYQGV-----NL 283
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL GL + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 284 YVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMN 341
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 342 GRIVATKPLYVALAQRK 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 88 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 145
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 146 NGMLLNDRKVFVG-----RFKSRKEREAELGARAREFTN----VYIKNFGEDMDDEKLKE 196
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS +V+ + +G+S+GFGFV+FE ED Q A+D MNG E+ GR + + A +
Sbjct: 197 LFSKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 255
Query: 295 R 295
+
Sbjct: 256 K 256
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 225 WGLTSQGL--RDA---FQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
WG Q L R+A F +LS +V + T RS G+ +V F+ D + ALD MN
Sbjct: 2 WGTCIQTLPKREAQQDFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNF 61
Query: 280 VEVEGRPLRLNMANERAP 297
++GRPLR+ M ++R P
Sbjct: 62 DVIKGRPLRI-MWSQRDP 78
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y GN+ +T L E+FA G + S +++ D+S +GFV A AI
Sbjct: 61 VYAGNIHTQVTEILLQEIFASTGPIESCKLIRK---DKS-SYGFVHYFDRRCASMAIMTL 116
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G I G+ +KVN+ A G + S S I+ G+L +T L D
Sbjct: 117 NGRHIFGQPMKVNWA--------YATGQREDTS------SHFNIFVGDLSPEVTDAALFD 162
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
+F A+V++++ TGRSRGFGFV+F +D Q+A++ MNG + R +R N A +
Sbjct: 163 SFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATK 222
Query: 295 RA 296
A
Sbjct: 223 GA 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 33/207 (15%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L + F+ + + A +++D+ T RSRGFGFV+ + ++A+ AI
Sbjct: 146 IFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 205
Query: 175 DGSQIGGRTVKVN-------FPEVPRGGERAAM----------GPKLQNSYQGFVDSPHK 217
+G + R ++ N F E + ++ G +L N D+P
Sbjct: 206 NGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNE-----DAPEN 260
Query: 218 ------IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
+Y GNL +T L F L A I E R +GFGFV + T ++
Sbjct: 261 NPQYTTVYVGNLSPEVTQLDLHRLFY----TLGAGAIEEVRVQRDKGFGFVRYNTHDEAA 316
Query: 272 SALDAMNGVE-VEGRPLRLNMANERAP 297
A+ N + R ++ + N+ P
Sbjct: 317 LAIQMGNAQPYLFSRQIKCSWGNKPTP 343
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 277 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 332
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 333 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 379
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 380 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 436
Query: 289 LNMA 292
L+ A
Sbjct: 437 LDWA 440
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 187 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 241
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 242 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 295
Query: 231 GLRDAFQGQPGLLSAKVIFERY----TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 296 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 347
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 348 IRLELQGPRGSP 359
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 91/222 (40%), Gaps = 56/222 (25%)
Query: 104 PKVAASDEAAR--------------------------LYVGNLPYSMTSSSL----AEVF 133
P AA + + L++GNL + + + L +E+F
Sbjct: 68 PVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELF 127
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A+ A D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+
Sbjct: 128 AKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPK 178
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
G + V + + A NL + +T L++ F+ + ++
Sbjct: 179 GRDSKK------------VRAARTLLAKNLSFNITEDELKEVFED-----AVEIRLVSQD 221
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GRS+G ++ F++ D + L+ G E++GR + L E+
Sbjct: 222 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 263
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V ++ +P+ +SDE L+VG+L + M L F+ G + SA+I+ ++ T +S G+G
Sbjct: 79 VMQQHQPQ--SSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYG 136
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
F+ + A++ ++ ++G+ + + ++N+ G R GP
Sbjct: 137 FMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDF----------- 185
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
I+ G+L ++ L++ FQ + + +AKV+ + TGRS+G+GFV F + A+
Sbjct: 186 -SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAM 244
Query: 275 DAMNGVEVEGRPLRLNMANER 295
MNGV RP+R++ A R
Sbjct: 245 TEMNGVYCSTRPMRISAATPR 265
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L + T L +VF + G + S +I +G GFV G+ A+EA++
Sbjct: 299 IFVGRLDPNATDEDLRQVFGQYGELVSVKIPV------GKGCGFVQFGNRASAEEALQRL 352
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ I +TV++++ P
Sbjct: 353 HGTVIRQQTVRLSWGRSP 370
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 94 EEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
EEE E+E + + ++V L + + L F + G V A+IV DRV+ RS
Sbjct: 158 EEELNEDERDKRT--------VFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 209
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
+G G+V AI+L G ++ G + E + R A P+ +S Q
Sbjct: 210 KGVGYVEFKDEASVPLAIQL-TGQKLLGIPIIAQLTEAEKN--RQARNPEA-SSGQSASA 265
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
H++Y GN+ + +T +++ F+ P G L + + TGRSRG+GFV F +
Sbjct: 266 PFHRLYVGNIHFSITENDIQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQARE 323
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPP 298
AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 324 ALEKMNGFDLAGRPIRVGLGNDKFTP 349
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E+ +A E +AS RLYVGN+ +S+T + + VF G + ++ D
Sbjct: 245 EAEKNRQARNPEASSGQSASAPFHRLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE- 303
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
T RSRG+GFV +A+EA+ +G + GR ++V
Sbjct: 304 TGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRV 340
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 106 VAASDEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
V DE R ++V L + S L F + G V A+IV DR++ RS+G G+V +
Sbjct: 150 VLNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKN 209
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGN 222
+ A++L G ++ G V V E + R A + S+ V P H++Y GN
Sbjct: 210 EDSVAPALQL-TGQKLLGIPVIVQVTEAEKN--RQARTTEPGGSHPNHV--PFHRLYVGN 264
Query: 223 LGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
+ + +T Q L+ F P G L + + T RSRG+GFV F A + AL+ MNG +
Sbjct: 265 IHFNVTEQDLQAVFD--PFGELEFVQLQKDETNRSRGYGFVQFRDAGQAREALEKMNGFD 322
Query: 282 VEGRPLRLNMANERAPP 298
+ GRP+R+ + N++ P
Sbjct: 323 LAGRPIRVGLGNDKFTP 339
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V ++ +P+ +SDE L+VG+L + M L F+ G + SA+I+ ++ T +S G+G
Sbjct: 79 VMQQHQPQ--SSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYG 136
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
F+ + A++ ++ ++G+ + + ++N+ G R GP
Sbjct: 137 FMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDF----------- 185
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
I+ G+L ++ L++ FQ + + +AKV+ + TGRS+G+GFV F + A+
Sbjct: 186 -SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAM 244
Query: 275 DAMNGVEVEGRPLRLNMANER 295
MNGV RP+R++ A R
Sbjct: 245 TEMNGVYCSTRPMRISAATPR 265
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L + T L +VF + G + S +I +G GFV G+ A+EA++
Sbjct: 298 IFVGRLDPNATDEDLRQVFGQYGELVSVKIPV------GKGCGFVQFGNRASAEEALQRL 351
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ I +TV++++ P
Sbjct: 352 HGTVIRQQTVRLSWGRSP 369
>gi|189205843|ref|XP_001939256.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975349|gb|EDU41975.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 756
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 111 EAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
E AR L+V L ++TS L E F+E+ + +A +V D+ T S+ +GFVT VE+A+
Sbjct: 37 EVARRQLFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRESKSYGFVTFADVEDAQ 96
Query: 169 EAIRLFDGSQIGGRTVKVNFPEV---------PRGGERAAMGPKLQNSYQGFVDSPHKIY 219
A + ++I G+ +KV+F E PR G+RA K + Q K+
Sbjct: 97 RAKEELNNTEIKGKKIKVDFAEARQREGEEKRPRAGDRA----KAEREQQIKEAQTPKLI 152
Query: 220 AGNLGWGLTSQ-GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
NL W + +Q L+ F+ G ++ + ++ G RGFGFV+ ++ + A+ +N
Sbjct: 153 IRNLPWTIKTQEDLQKLFRSY-GKVNFVNLPKKPNGELRGFGFVSLRGKKNAERAIQELN 211
Query: 279 GVEVEGRPLRLNMANER 295
G E++ RP+ ++ A +R
Sbjct: 212 GKEIDERPIAVDWAVDR 228
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 95 EEAVEEEEEPKVAASD-----EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E+ E++EE + D E L+V N+P+++ L E F + G + A +V DR
Sbjct: 294 EDISEDDEEGGIQLDDNRPKREEYTLFVRNVPFTVDDERLKEHFQQFGGIRFARVVVDRE 353
Query: 150 TDRSRGFGFVTMGSVEE 166
T+R +G GFV+ + E+
Sbjct: 354 TERPKGTGFVSFFTEED 370
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+ ++ N+ + + + L++ FQ G+ A+V+ +R T R +G GFV+F T ED+ + L
Sbjct: 317 YTLFVRNVPFTVDDERLKEHFQQFGGIRFARVVVDRETERPKGTGFVSFFTEEDMINCLK 376
Query: 276 AMNGVEVEGRPL 287
+ V+++ + L
Sbjct: 377 GVPRVKLQKKNL 388
>gi|119501270|ref|XP_001267392.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
gi|119415557|gb|EAW25495.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
Length = 732
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +G+GFVT +E+A+ A++ F
Sbjct: 44 LFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALKEF 103
Query: 175 DGSQIGGRTVKVNFPEVPRGGER-----------AAMGPKLQNSYQGFVDSPHKIYAGNL 223
+GS G+T++V++ + PR E AA+ K Q Q P K+ NL
Sbjct: 104 NGSVFEGKTIRVDYAQ-PRHREIDENLGKSVPAPAALELKQQREQQKTSTQPPKLIVRNL 162
Query: 224 GWGLTS-QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + + L F+ + V + + GFGFV ++ + AL A+NG EV
Sbjct: 163 PWSIKEPEDLAVHFRSFGKV--KYVTLPKKGDQLAGFGFVVLRGKKNAEKALQAVNGKEV 220
Query: 283 EGRPLRLNMANER 295
+GR L ++ A E+
Sbjct: 221 DGRTLAVDWAVEK 233
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M + L E+F+ G S +++ D T RS+GFGFV EE
Sbjct: 185 ARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDH-TGRSKGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
A++A+ +G +I GR V V E+ R E+ M + + YQG +
Sbjct: 244 AQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQ--MKQERVSRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL G+ + LR F + SAKV+ E G S+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVSTKPLYVALAQRK 371
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + SRG GFV + E A AI+
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIQTM 158
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V V R E A + N +Y N G + L
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTN-----------VYIKNFGDDMDDNRL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R+ F LS KV+ + +TGRS+GFGFV FE E+ Q A+ MNG E+ GR + + A
Sbjct: 208 REIFSRFGKTLSVKVMMD-HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRA 266
Query: 293 NER 295
+R
Sbjct: 267 QKR 269
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D + RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR V++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPVRIMWSQRDPGLRKSGVG---------------NVFIKNLDDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + SRG GFV FET E A+ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIQTMNGMLLNDR 166
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + + RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPVRI-MWSQRDP 91
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + + E +++E + + LYV NL + L + F+ GT+
Sbjct: 266 AQKRLERQSELKRKFEQMKQER----VSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + S+GFGFV S EEA +A+ +G + + + V + R ER A+
Sbjct: 322 SAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSY 208
L N Y
Sbjct: 378 ---LTNQY 382
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 268 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 323
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 324 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 370
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 371 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 427
Query: 289 LNMA 292
L+ A
Sbjct: 428 LDWA 431
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 178 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 232
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 233 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 286
Query: 231 GLRDAFQGQPGLLSAKVIFERY----TGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 287 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 338
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 339 IRLELQGPRGSP 350
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 91/222 (40%), Gaps = 56/222 (25%)
Query: 104 PKVAASDEAAR--------------------------LYVGNLPYSMTSSSL----AEVF 133
P AA + + L++GNL + + + L +E+F
Sbjct: 59 PVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELF 118
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A+ A D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+
Sbjct: 119 AKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPK 169
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
G + V + + A NL + +T L++ F+ + ++
Sbjct: 170 GRDSKK------------VRAARTLLAKNLSFNITEDELKEVFED-----AVEIRLVSQD 212
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GRS+G ++ F++ D + L+ G E++GR + L E+
Sbjct: 213 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 254
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 485 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 540
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 541 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 587
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 588 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 644
Query: 289 LNMANER 295
L+ A +
Sbjct: 645 LDWAKPK 651
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 395 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 449
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + + NL + T +
Sbjct: 450 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSGESKT---LVLSNLSYSATEE 503
Query: 231 GLRDAFQGQPGLLSAKVIFERYT----GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 504 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 555
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 556 IRLELQGPRGSP 567
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 104 PKVAASDEAAR--------------------------LYVGNLPYSMTSSSL----AEVF 133
P AA + + L++GNL + + + L +E+F
Sbjct: 276 PVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELF 335
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A+ A D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+
Sbjct: 336 AKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPK 386
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
G ++S + V + + A NL + +T L++ F+ + ++
Sbjct: 387 G----------RDSKK--VRAARTLLAKNLSFNITEDELKEVFED-----AVEIRLVSQD 429
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GRS+G ++ F++ D + L+ G E++GR + L E+
Sbjct: 430 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 471
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M + L E+F+ G S +++ D T RS+GFGFV EE
Sbjct: 185 ARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDN-TGRSKGFGFVNFEKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
A++A+ +G +I GR V V E+ R E+ M + + YQG +
Sbjct: 244 AQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQ--MKQERVSRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL G+ + LR F + SAKV+ E G S+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGIDDERLRKEFSPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVSTKPLYVALAQRK 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + SRG GFV + E A AI
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIETM 158
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V V R E A + N +Y N G + L
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTN-----------VYIKNFGDDMDDNRL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
R+ F LS KV+ + TGRS+GFGFV FE E+ Q A+ MNG E+ GR + + A
Sbjct: 208 REIFSRFGKTLSVKVMMDN-TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRA 266
Query: 293 NER 295
+R
Sbjct: 267 QKR 269
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D + RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR V++ + + G ++ +G ++ NL + ++ L
Sbjct: 71 TMNFEVIKGRPVRIMWSQRDPGLRKSGVG---------------NVFIKNLDDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + SRG GFV FET E A++ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIETMNGMLLNDR 166
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + + RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFEVIKGRPVRI-MWSQRDP 91
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q E + E + + E +++E + + LYV NL + L + F+ GT+
Sbjct: 266 AQKRLERQSELKRKFEQMKQER----VSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTIT 321
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
SA+++ + S+GFGFV S EEA +A+ +G + + + V + R ER A+
Sbjct: 322 SAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ--RKEERKAI 377
Query: 201 GPKLQNSY 208
L N Y
Sbjct: 378 ---LTNQY 382
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 486 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAK 541
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 542 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 588
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 589 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 645
Query: 289 LNMANER 295
L+ A +
Sbjct: 646 LDWAKPK 652
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI RS+G ++ S +A++
Sbjct: 396 AARTLLAKNLSFNITEDELKEVFEDA-----VEIRLVSQDGRSKGIAYIEFKSEADAEKN 450
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + + NL + T +
Sbjct: 451 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSGESKT---LVLSNLSYSATEE 504
Query: 231 GLRDAFQGQPGLLSAKVIFERYT----GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 505 TLQEVFE--------KATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 556
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 557 IRLELQGPRGSP 568
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 104 PKVAASDEAAR--------------------------LYVGNLPYSMTSSSL----AEVF 133
P AA + + L++GNL + + + L +E+F
Sbjct: 277 PVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELF 336
Query: 134 AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
A+ A D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+
Sbjct: 337 AKNDLAA-----VDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPK 387
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
G ++S + V + + A NL + +T L++ F+ + ++
Sbjct: 388 G----------RDSKK--VRAARTLLAKNLSFNITEDELKEVFED-----AVEIRLVSQD 430
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
GRS+G ++ F++ D + L+ G E++GR + L E+
Sbjct: 431 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 472
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L M + L FA G +AS +++ ++ T S G+GFV S A++ ++ +
Sbjct: 86 IWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGY 145
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + + ++N+ G +R+ GP L I+ G+L ++ L
Sbjct: 146 AGVLMPNTDQPFRLNWATFSMGDKRSDNGPDL------------SIFVGDLASDVSDSLL 193
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F G+ P + +AKV+F+ TGRS+G+GFV F + A+ MNGV RP+R+
Sbjct: 194 HETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGA 253
Query: 292 ANER 295
A R
Sbjct: 254 ATPR 257
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L ++ S L E FA + +V +A++V+D T RS+G+GFV G E +A+
Sbjct: 179 IFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTE 238
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-----IYAGNLGWGLT 228
+G R +++ PR Q Y V S I+ G L ++
Sbjct: 239 MNGVYCSSRPMRIG-AATPRKSS------GYQQQYSSHVQSDGDSMNTTIFVGGLDPNVS 291
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR F ++S K+ +G GFV F + + AL +NG + + +R
Sbjct: 292 DEDLRQPFSQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVR 345
Query: 289 LNMANERAPPVLPAAKETKTE 309
L+ PA K+ + +
Sbjct: 346 LSWGRN------PANKQMRAD 360
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ L + F++ G + S +I +G GFV + A++A++
Sbjct: 281 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKI------PVGKGCGFVQFANRNNAEDALQKL 334
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+G+ IG +TV++++ P + RA G + +Y G
Sbjct: 335 NGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG 371
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+++V LP + +L F G + A++V+D T RS+GFGF+T + A +AI
Sbjct: 12 KVFVAGLPRDVDDDALYNKFRAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDHAMDAIDK 71
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMG--------PKLQNSYQGFVDSPHKIYAGNLGW 225
+G GR + V F + G E+ + PK+ S + +Y GNL +
Sbjct: 72 TNGKNWNGRVLNVRFLKPKTGSEKDMISTSAPEVPVPKISTSAKNCT----TLYVGNLSY 127
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T +R F + + ++ T + RGFG+V F E AL A NG V GR
Sbjct: 128 EITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFYDTESCTKAL-ATNGKIVIGR 186
Query: 286 PLRLNMANE 294
P+ ++++ E
Sbjct: 187 PMHVDLSGE 195
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+K++ L + L + F+ + AKV+F+ TGRS+GFGF+T+ + A+D
Sbjct: 11 NKVFVAGLPRDVDDDALYNKFRAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDHAMDAID 70
Query: 276 AMNGVEVEGRPLRL 289
NG GR L +
Sbjct: 71 KTNGKNWNGRVLNV 84
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++AGNL W + L +AF+G GL+ A+V+ +R GRSRGFG+V FETAE A +AM
Sbjct: 269 LFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRDGGRSRGFGYVDFETAEAATKAYEAM 328
Query: 278 NGVEVEGRPLRLNMANER 295
G E++ RPL L+ AN R
Sbjct: 329 QGSELDSRPLNLDYANSR 346
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 83 DEPETEQEEEEEEEAVEEEEE----PKVAASDE--AARLYVGNLPYSMTSSSLAEVFAEA 136
DE +T+ E+ + + EEE PK A +DE A+ L+ GNL +++ ++L+E F
Sbjct: 231 DESKTKTEDASASKKRKAEEEIDATPKKAKTDEQAASTLFAGNLSWNIDDNTLSEAFKGF 290
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVP 192
+ A +V DR RSRGFG+V + E A +A GS++ R + +++ P
Sbjct: 291 EGLVGARVVTDRDGGRSRGFGYVDFETAEAATKAYEAMQGSELDSRPLNLDYANSRPADS 350
Query: 193 RGGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
+RA K G SP ++ GNL + + +R F + S ++ +
Sbjct: 351 NPRDRATDRAK----KHGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTD 406
Query: 251 RYTGRSRGFGFVTFETAEDLQSALDAMNGVEV----EGRPLRLNMANER 295
+G +GFG+VTF + ED ++ +NG + R +RL+ A+ R
Sbjct: 407 PDSGNLKGFGYVTFTSVEDAKNVFQQLNGAPLGNGRTSRSVRLDFASSR 455
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + S L + F + G V A+IV DRV+ RS+G G+V E
Sbjct: 231 DERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVKDRVSGRSKGVGYVEFKDEESV 290
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
++AI L G ++ G + E + + R G Q++ F H++Y GN+ +
Sbjct: 291 QKAIGLT-GQKLLGIPIIAQLTEAEKNRQARTTEGTATQSNGVPF----HRLYVGNIHFS 345
Query: 227 LTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T L++ F+ P G L + + GRS+G+GFV F + AL+ MNG E+ GR
Sbjct: 346 ITEADLKNVFE--PFGELEFAQLQKEENGRSKGYGFVQFIDPAQAKEALEKMNGFELAGR 403
Query: 286 PLRLNMANER 295
P+R+ + N++
Sbjct: 404 PIRVGLGNDK 413
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
EA ++V L +T+ L F + G+V + IV DR++ RS+G G+V +VE
Sbjct: 11 EARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYVEFRTVELV 70
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH---KIYAGNLG 224
AI L G+ + G +++ E R R G N G V +PH ++Y G+L
Sbjct: 71 DRAIGL-SGTVVMGLPIQIQHTEAER--NRLHPGDGNLNLPPG-VSAPHGGMQLYVGSLH 126
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LT ++ F+ L + + TGRS+G+ FV ++ AED + AL+ M G E+ G
Sbjct: 127 FNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQMEGFELAG 186
Query: 285 RPLRLNMANERA 296
R LR+N +E+
Sbjct: 187 RTLRVNTVHEKG 198
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P V+A +LYVG+L +++T S + +VF G + ++ D +T RS+G+ FV
Sbjct: 109 PGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKR 168
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVN 187
E+AK A+ +G ++ GRT++VN
Sbjct: 169 AEDAKMALEQMEGFELAGRTLRVN 192
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 104 PKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
P V D R ++V L +T+ F++AG V A+I+ DR + +S+G G+V
Sbjct: 114 PPVPEEDRDRRTVFVTQLAARLTTREFDAFFSQAGRVREAKIITDRNSRKSKGCGYVEFY 173
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR-----GGERAAMGPKLQNSYQGFVDSPHK 217
+ A+ L G ++ G V V E + +R AMG + YQ +
Sbjct: 174 DETSVQNALAL-SGQKLLGIPVLVQLSEAEKNRLAMAAQRNAMGVTTEPLYQ-------R 225
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L + LT +R F+ L + + TGRS+GFGF+ ++ A D + AL+ M
Sbjct: 226 LYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKM 285
Query: 278 NGVEVEGRPLRLNMANERAPPVLP--AAKETKTE----NSIDGSELLSSIS 322
NG E+ GR L++ + +E++ + + +TE NS+ +EL++ ++
Sbjct: 286 NGFELAGRNLKVGLVSEKSGTTMSTFGLDDEETEGLALNSLSRAELMAKLA 336
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+E E A + E +Y+ N M L E+F + G S ++ D + +S+GFGF
Sbjct: 177 KEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD-SGKSKGFGF 235
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQG 210
V+ E+A+ A+ +G ++ G+ V V + GER M YQG
Sbjct: 236 VSFERHEDAQRAVDEMNGKEMNGKQVYVG--RAQKKGERQTELKRKFEQMKQDRMTRYQG 293
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
+Y NL GL + LR F + SAKV+ E GRS+GFGFV F + E+
Sbjct: 294 V-----NLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEA 346
Query: 271 QSALDAMNGVEVEGRPLRLNMANER 295
A+ MNG V +PL + +A +
Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQRK 371
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S A LYVG+L +T + L E F+ AG + S + D +T RS G+ +V +
Sbjct: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I GR V++ + + P L+ S G I+ NL
Sbjct: 65 AERALDTMNFDVIKGRPVRIMW---------SQRDPSLRKSGVG------NIFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+GFV FET E + A++ MNG+ + R
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 175 DGSQIGGRTVKV-NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G + R V V F R A MG + + F + +Y N G + + L+
Sbjct: 159 NGMLLNDRKVFVGRFKS--RKEREAEMGARAKE----FTN----VYIKNFGEDMDDEKLK 208
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F LS +V+ + +G+S+GFGFV+FE ED Q A+D MNG E+ G+ + + A
Sbjct: 209 EIFCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQ 267
Query: 294 ER 295
++
Sbjct: 268 KK 269
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP+R+ M ++R P
Sbjct: 73 NFDVIKGRPVRI-MWSQRDP 91
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
P VAA+ A LYVG+L ++ S L + F+E ++AS + D T +S +G++
Sbjct: 4 HPSVAAA--PASLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFV 61
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGN 222
S ++A AI L + S + G+ ++V + ++A+G ++ N
Sbjct: 62 SPQDAIRAIELKNNSTLNGKAMRVMWSRRDPDARKSAIG---------------NLFVKN 106
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + + GL+D F+ +LS+KV+ G+S+G+GFV FE+ E + A++ +NG V
Sbjct: 107 LPESIDNAGLQDIFKKYGNILSSKVVTSE-DGKSKGYGFVQFESEESSKVAIEKLNGYTV 165
Query: 283 EGRPLRLNMANERAPPVLP 301
+ L + +++ +LP
Sbjct: 166 ADKELYVGKFVKKSDRILP 184
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+ NL ++ ++L E F+ G + S I D S+GFGFV + ++AK+A+
Sbjct: 193 LYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDN-NGMSKGFGFVNYDNPDDAKKAMEAM 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY------QGFVDSPHKIYAGNLGWGLT 228
+GSQ+G + + V R ++A L + + Q IY N+ ++
Sbjct: 252 NGSQLGSKIL-----YVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNIDDHVS 306
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LRD F + SAK++ + G S+GFGFV F T E+ A++ +G G+PL
Sbjct: 307 DEELRDHFSACGTITSAKIMRDD-KGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLY 365
Query: 289 LNMANER 295
+ +A +
Sbjct: 366 VALAQRK 372
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V NLP S+ ++ L ++F + G + S+++V +S+G+GFV S E +K AI
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSE-DGKSKGYGFVQFESEESSKVAIEKL 160
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + + V + + +R GP + + +Y NL ++ L++
Sbjct: 161 NGYTVADKELYVG--KFVKKSDRILPGPDARYT---------NLYMKNLDLDVSEATLQE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F G + + VI + G S+GFGFV ++ +D + A++AMNG ++ + L + A +
Sbjct: 210 KFSSF-GKIVSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMNGSQLGSKILYVARAQK 268
Query: 295 RA 296
+A
Sbjct: 269 KA 270
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E EQ + E ++E+ K S+ +YV N+ ++ L + F+ GT+
Sbjct: 266 AQKKAEREQILHHQFEEKQKEQILKYKGSN----IYVKNIDDHVSDEELRDHFSACGTIT 321
Query: 141 SAEIVYDRVTDR--SRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
SA+I+ D D+ S+GFGFV + EEA +A+ F G G+ + V
Sbjct: 322 SAKIMRD---DKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYV 366
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAE-AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++V L + S L F E AG V A+IV DR++ RS+G G+V E ++A++L
Sbjct: 175 VFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETVQKALQL 234
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQG 231
G + G + V E + R A + S G +S H++Y GN+ + +T Q
Sbjct: 235 T-GKPLAGIPIIVKLTEAEK--NRQARNTE---STSGNPNSVPFHRLYVGNIHFNVTEQD 288
Query: 232 LRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+ F+ P G L + + GRSRG+GFV F A + AL+ MNG ++ GRP+R+
Sbjct: 289 LQAVFE--PFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVG 346
Query: 291 MANERAPP 298
+ N++ P
Sbjct: 347 LGNDKFTP 354
>gi|68478681|ref|XP_716609.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|238880985|gb|EEQ44623.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 510
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAAR------LYVGNLPYSMTSSSLAEVFA 134
S + E E ++ ++ + ++E++ A++ E R LYVGNLP S + ++ E+F+
Sbjct: 41 STESSENESQQAQQPSSQDDEKQVNAASAKEGGREVSNKILYVGNLPKSASEETIQELFS 100
Query: 135 EAGT-VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR 193
G V + +I+ D+ + F+ + E A A+ +G + +KVN+
Sbjct: 101 VGGNPVKTIKILNDK-NKAGFNYAFIEYDTNEVADMALNTLNGRLVDDVEIKVNW----- 154
Query: 194 GGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
+ AA+ N+ + + I+ G+L + +GLR+AF L A V+++ T
Sbjct: 155 AFQSAAIAGNPNNTEEPLFN----IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQT 210
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RSRG+GFVTF D + AL MNG + GR +R N A+ +
Sbjct: 211 SRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWASHK 252
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 104/198 (52%), Gaps = 17/198 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P+ + +E L++G+L M + L F++ G V S +++ ++ T + G+GF+ + +
Sbjct: 81 PQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 140
Query: 164 VEEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ ++G+ + + ++N+ + G RA D+P + I+
Sbjct: 141 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRAD-------------DTPDYTIFV 187
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L +T L++ F+G P + AKV+ +R TGRS+G+GFV F + A++ MNG
Sbjct: 188 GDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNG 247
Query: 280 VEVEGRPLRLNMANERAP 297
+ RP+R+ A + P
Sbjct: 248 MFCSTRPMRIGPAATKKP 265
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V DR T RS+G+GFV G E A+
Sbjct: 185 IFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNE 244
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAMGPKLQNSY--QGFVDSPHK-IYAGNLGWGLT 228
+G R +++ + P GG++ QN+ QG D + I+ G L +T
Sbjct: 245 MNGMFCSTRPMRIGPAATKKPVGGQQFQKA-SFQNTQGNQGESDPNNTTIFVGGLDSNVT 303
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
LR F L+ K+ + G FV F + AL +NG ++ + +R
Sbjct: 304 DDYLRQVFSQYGELVHVKIPVGKRCG------FVQFANRACAEQALAGLNGTQLGAQSIR 357
Query: 289 LNM----ANERAPP 298
L+ +N++A P
Sbjct: 358 LSWGRSPSNKQAQP 371
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P AS +A LYVG L ++T + L E+F G VAS + D VT RS G+ +V +
Sbjct: 47 PASGASTPSASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLN 106
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNL 223
+ + A+ + S I R ++ + + P L+ + QG I+ NL
Sbjct: 107 AADGERALEQLNYSLIKNRACRIMWSQ---------RDPALRKTGQG------NIFIKNL 151
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ + L D F +LS KV + GRSRGFGFV ++TAE +A+ A+NG+
Sbjct: 152 DEQIDHKALHDTFAAFGNVLSCKVATDE-NGRSRGFGFVHYDTAEAADTAIKAVNGM 207
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + +L + FA G V S ++ D RSRGFGFV + E A AI+
Sbjct: 146 IFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDE-NGRSRGFGFVHYDTAEAADTAIKAV 204
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V ER A + ++ + +Y NL +T D
Sbjct: 205 NGMLLNDKKVFVG--HYISKKERQAHIDEQKSQFT-------NLYVKNLDTEVTDDEFND 255
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + G +++ V+ + G+S+GFGFV F+ E Q+A+DA++ E+ G+ L + A +
Sbjct: 256 MF-AKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDALHDTELNGKKLFVTRAQK 314
Query: 295 RA 296
+A
Sbjct: 315 KA 316
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NL +T ++FA+ G V SA + D +S+GFGFV E A+ A+
Sbjct: 239 LYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDE-EGKSKGFGFVNFKDHESAQAAVDAL 297
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-QGFVDSPHK-----IYAGNLGWGLT 228
+++ G+ + V R ++A +L+ SY Q ++ K +Y NL +
Sbjct: 298 HDTELNGKKLFVT-----RAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDMD 352
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
LR F+ + S K++ + G S+GFGFV + + E+ A+ MN + +PL
Sbjct: 353 DDKLRAEFEPFGTITSCKIMRDE-KGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLY 411
Query: 289 LNMANER 295
++ A R
Sbjct: 412 VSPAQRR 418
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E EEE + E+ K+ + + A LY+ NL M L F GT+ S +I+
Sbjct: 313 QKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIM 372
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVN 187
D S+GFGFV S EEA +A+ + +G + + V+
Sbjct: 373 RDE-KGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYVS 413
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P ++ H++Y G
Sbjct: 248 KNEESVPLAIQL-TGQKLLGIPIIAQLTEAEKN--RQARNPDAHSNNNQQSIPFHRLYVG 304
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 305 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 362
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 363 DLAGRPIRVGLGNDK 377
>gi|330914835|ref|XP_003296804.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
gi|311330893|gb|EFQ95099.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
Length = 326
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+GNL Y +T+ L VF+ G V S +IVYD SRGFG+V G++ +A+ AI
Sbjct: 138 LYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDN-RGLSRGFGYVEFGNLADAQAAIDNL 196
Query: 175 DGSQIGGRTVKVNFPE-VPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGL 232
D GR + V + + P R++ G S++ ++P K ++ GN+ + ++ + L
Sbjct: 197 DMQVFEGRNMVVQYHQPKPNSMSRSSAG-----SFEA--NTPSKTLFIGNMSFEMSDKDL 249
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
D F+ ++ +V +R TG+ RGF F A + ++ + GR LR++
Sbjct: 250 NDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASATKAKEVLSEKIIYGRQLRID 307
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++GN+ + M+ L ++F + V + DR T + RGF V A +A +
Sbjct: 235 LFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASATKAKEVL 294
Query: 175 DGSQIGGRTVKVNF 188
I GR +++++
Sbjct: 295 SEKIIYGRQLRIDY 308
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 16/190 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+ D+ L+VG+L + M + L F+ G V+S +++ +++T +S G+GF+ S
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAA 161
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPHKIYAGNL 223
A+E ++ + GS + + ++N+ G +RA GP L I+ G+L
Sbjct: 162 AEEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAVENGPDL------------SIFVGDL 209
Query: 224 GWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L + F + P + SAKV+ + TGRS+G+GFV F + AL MNG
Sbjct: 210 SPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYC 269
Query: 283 EGRPLRLNMA 292
R +R+ +A
Sbjct: 270 SNRQMRVGVA 279
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAG-TVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T + L E F + +V SA++V D T RS+G+GFV G E A+
Sbjct: 204 IFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTE 263
Query: 174 FDGSQIGGRTVKVNFPEVPRG---------------GERAAMGPKLQNSYQGFVDSPHKI 218
+G+ R ++V R G A G S + I
Sbjct: 264 MNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTNATI 323
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
+ G + +T + LR F ++S K+ +G GFV F + + A++ +N
Sbjct: 324 FVGGIDADVTDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFAERKSAEDAIETLN 377
Query: 279 GVEVEGRPLRLNMANERAP 297
G + +RL+ R+P
Sbjct: 378 GTVIGKNTVRLSWG--RSP 394
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A ++VG + +T L + F++ G V S +I +G GFV + A++AI
Sbjct: 321 ATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFAERKSAEDAIE 374
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+G+ IG TV++++ P R G + Y
Sbjct: 375 TLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 410
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 184 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 243
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 244 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 297
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 298 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 357
Query: 291 MANER 295
ER
Sbjct: 358 HVTER 362
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
gi|50508741|dbj|BAD31317.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
Length = 206
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 17/185 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGT-VASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
DE L++G+L Y M S L+ FA G V S +++ ++ + S G+GF+ S A+
Sbjct: 10 DEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAE 69
Query: 169 EAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGW 225
A+ F+G + + K+N+ G RAA D P H I+ G+L
Sbjct: 70 YALANFNGRMMLNVDQLFKLNWASSGAGERRAA------------DDGPEHTIFVGDLAS 117
Query: 226 GLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L +AF+ P + AKV+F++ TGRS+G+GFV F + A+ MNG +
Sbjct: 118 DVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLST 177
Query: 285 RPLRL 289
R +RL
Sbjct: 178 RQMRL 182
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 103 EPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
+P + E ++VG+L + M S L F+ G ++S +++ ++ T S G+GFV
Sbjct: 74 QPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFL 133
Query: 163 SVEEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
S A++ ++ + G + +T ++N+ G +R+ P L I+
Sbjct: 134 SHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDL------------SIFV 181
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L +T L + F + P + +AKV+ + TGRS+G+GFV F + A+ MNG
Sbjct: 182 GDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 241
Query: 280 VEVEGRPLRLNMANER 295
+ RP+R+ A R
Sbjct: 242 IYCSSRPMRIGAATPR 257
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEA-GTVASAEIVYDRVTDRSRGFGFVTMGS 163
K + +D ++VG+L +T S L E F+ +V +A++V D T RS+G+GFV G
Sbjct: 169 KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGD 228
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH------- 216
E +A+ +G R +++ PR + G + Q+S QG S +
Sbjct: 229 DNERSQAMTEMNGIYCSSRPMRIG-AATPR----KSSGYQQQHSSQGGGYSTNGYFSQGL 283
Query: 217 ---------KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETA 267
I+ G L +T + LR F ++S K+ +G GFV F
Sbjct: 284 QSEGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPV------GKGCGFVQFANR 337
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERA 296
D + AL +NG + + +RL+ A
Sbjct: 338 NDAEEALQKLNGTVIGKQTVRLSWGRNPA 366
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L ++T L + F++ G + S +I +G GFV + +A+EA++
Sbjct: 294 IFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPV------GKGCGFVQFANRNDAEEALQKL 347
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+G+ IG +TV++++ P + G + +Y G IY G G+GL S
Sbjct: 348 NGTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYG-----GHIYDG-YGYGLAS 396
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 19/191 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
DE L++G+L Y M + L FA G + SA+++ ++ T + G+GF+ S A+
Sbjct: 61 DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAER 120
Query: 170 AIRLFDGSQIGG---RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGW 225
++ F+ + I + ++N+ + G +R DSP + I+ G+L
Sbjct: 121 VLQTFNNAPIPSFPDQLFRLNWASLSSGDKRD--------------DSPDYTIFVGDLAA 166
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L + F+ P + AKV+ +R TGR++G+GFV F + A+ MNGV
Sbjct: 167 DVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCST 226
Query: 285 RPLRLNMANER 295
RP+R+ A +
Sbjct: 227 RPMRIGPAASK 237
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A +V A++V DR T R++G+GFV E A+
Sbjct: 159 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTE 218
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ---GFV---DSPHK--IYAGNLGW 225
+G R +++ P ++ G + +SYQ G V + P+ ++ G L
Sbjct: 219 MNGVPCSTRPMRIG----PAASKKGVTGQR--DSYQSAAGGVPTDNDPNNTTVFVGGLDQ 272
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T L++ F GQ G +++ + R GFV F + AL +NGV++ G
Sbjct: 273 SVTDDHLKNVF-GQYG----EIVHVKIPAGKR-CGFVQFSEKSCAEEALRMLNGVQLGGT 326
Query: 286 PLRLNMANERAP 297
+RL+ R+P
Sbjct: 327 TVRLSWG--RSP 336
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L S+T L VF + G EIV+ ++ R GFV A+EA+R+
Sbjct: 265 VFVGGLDQSVTDDHLKNVFGQYG-----EIVHVKIPAGKR-CGFVQFSEKSCAEEALRML 318
Query: 175 DGSQIGGRTVKVNFPEVPRGGERA 198
+G Q+GG TV++++ P + A
Sbjct: 319 NGVQLGGTTVRLSWGRSPSNKQSA 342
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
VD ++ G+L + + L F ++SAKVI + TG+ G+GF+ F + +
Sbjct: 60 VDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAE 119
Query: 272 SALDAMNGVEVEGRP---LRLNMAN 293
L N + P RLN A+
Sbjct: 120 RVLQTFNNAPIPSFPDQLFRLNWAS 144
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAE-AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++V L + S L F E AG V A+IV DR++ RS+G G+V E ++A++L
Sbjct: 179 VFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETVQKALQL 238
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQG 231
G + G + V E + R A + S G +S H++Y GN+ + +T Q
Sbjct: 239 T-GKPLAGIPIIVKLTEAEK--NRQARNTE---STSGNPNSVPFHRLYVGNIHFNVTEQD 292
Query: 232 LRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+ F+ P G L + + GRSRG+GFV F A + AL+ MNG ++ GRP+R+
Sbjct: 293 LQAVFE--PFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVG 350
Query: 291 MANERAPP 298
+ N++ P
Sbjct: 351 LGNDKFTP 358
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVGN+ +++T L VF G + ++ D RSRG+GFV +A+EA+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDD-NGRSRGYGFVQFRDATQAREALEK 336
Query: 174 FDGSQIGGRTVKV 186
+G + GR ++V
Sbjct: 337 MNGFDLAGRPIRV 349
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP+V D R ++V + + L F G V A+IV DRVT RS+G G+V
Sbjct: 164 EPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEF 223
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E +A+ L G ++ G + E + RAA + + H++Y G
Sbjct: 224 KDEESVPQALEL-TGQKLKGVPIIAQLTEAEKN--RAARPSEGGAAPGANGAPFHRLYVG 280
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFER---YTGRSRGFGFVTFETAEDLQSALDAMN 278
N+ + +T + L++ F+ P +VI +R GRS+G+GFV F ++AL MN
Sbjct: 281 NIHFSVTEKDLQEIFE--PFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMN 338
Query: 279 GVEVEGRPLRLNMANERAPP 298
G E+ GR +R+ + N++ P
Sbjct: 339 GFELAGRQIRVGLGNDKFTP 358
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 190 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 249
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P ++ H++Y G
Sbjct: 250 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEKN--RQARNPDAHSNNNQQSIPFHRLYVG 306
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 307 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 364
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 365 DLAGRPIRVGLGNDK 379
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L M + L FA G +AS +++ ++ T S G+GFV S A++ ++ +
Sbjct: 86 IWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGY 145
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + + ++N+ G +R+ GP L I+ G+L ++ L
Sbjct: 146 AGVLMPNTDQPFRLNWATFSMGDKRSDNGPDL------------SIFVGDLASDVSDSLL 193
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F G+ P + +AKV+F+ TGRS+G+GFV F + A+ MNGV RP+R+
Sbjct: 194 HETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGA 253
Query: 292 ANER 295
A R
Sbjct: 254 ATPR 257
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 115 LYVGNLPYSMTSSSLAEVFA-EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L ++ S L E FA + +V +A++V+D T RS+G+GFV G E +A+
Sbjct: 179 IFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTE 238
Query: 174 FDGSQIGGRTVKVNFPEVPR-----------GGERAAMGPKLQNSYQGFVDSPHK-IYAG 221
+G R +++ PR G A+ G +Q+ DS + I+ G
Sbjct: 239 MNGVYCSSRPMRIG-AATPRKSSGYQQQYSSHGGYASNGASVQSD----GDSMNTTIFVG 293
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
L ++ + LR F ++S K+ +G GFV F + + AL +NG
Sbjct: 294 GLDPNVSDEDLRQPFSQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTV 347
Query: 282 VEGRPLRLNMANERAPPVLPAAKETKTE 309
+ + +RL+ PA K+ + +
Sbjct: 348 IGKQTVRLSWGRN------PANKQMRAD 369
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ L + F++ G + S +I +G GFV + A++A++
Sbjct: 290 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKI------PVGKGCGFVQFANRNNAEDALQKL 343
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+G+ IG +TV++++ P + RA G + +Y G
Sbjct: 344 NGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG 380
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 16/182 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L S+T + L E F+ G V S + D +T RS G+ +V S +A AI +
Sbjct: 34 LYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDVL 93
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ ++V + + R+ +G I+ NL + ++ L D
Sbjct: 94 NFQVINGKPIRVLYSQRDPAVRRSGVG---------------NIFIKNLDKAIDNKALLD 138
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + SAKV + G S+G+GFV FETAE Q+A+D +NG+E+ + + +
Sbjct: 139 TFAQFGTITSAKVAMDS-AGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGPFQR 197
Query: 295 RA 296
RA
Sbjct: 198 RA 199
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA+ GT+ SA++ D + S+G+GFV + E A+ AI
Sbjct: 122 IFIKNLDKAIDNKALLDTFAQFGTITSAKVAMDSAGN-SKGYGFVQFETAEAAQAAIDNV 180
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G ++ + V V R +R+ G N+ +Y NL L+ + LR+
Sbjct: 181 NGMELNDKQVYVG--PFQRRADRSTQGEAKFNN----------VYVKNLSENLSDEKLRE 228
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
F + G +++ VI + G+S+GFGFV FE+ E SA++ ++G
Sbjct: 229 KF-AEHGAVTSCVIMKDEEGKSKGFGFVCFESPEGAASAVENLDG 272
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL +++ L E FAE G V S I+ D +S+GFGFV S E A A+
Sbjct: 212 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDE-EGKSKGFGFVCFESPEGAASAVENL 270
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVD--SPHKIYAGNLGWGLTSQG 231
DG +T V + ER A + K + + ++ + +Y NL G +
Sbjct: 271 DGYTEDEKTWVV--CRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEEGTDDEK 328
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
LR+ F + G +++ + +G SRG FV F + ++ A+ MNG V +PL + +
Sbjct: 329 LRELFN-EFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVAL 387
Query: 292 ANERAPP 298
A + P
Sbjct: 388 AQRKEEP 394
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 71 SFDGFQVTED--------SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPY 122
+ DG+ TED +Q + E E E + + EA E K+A A LY+ NL
Sbjct: 269 NLDGY--TEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAG----ANLYIKNLEE 322
Query: 123 SMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGR 182
L E+F E GT+ S ++ D + SRG FV S +EA A+ +G +G +
Sbjct: 323 GTDDEKLRELFNEFGTITSCRVMRD-ASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAK 381
Query: 183 TVKVNF---PEVPRGGE-RAAMGP 202
+ V E P G A GP
Sbjct: 382 PLYVALAQRKEEPHAGRWHAGYGP 405
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NL YS T SL EVF +A + I + R++GF FV S+E+AKEA+
Sbjct: 468 LVVNNLSYSATEDSLREVFEKATS-----IRIPQNQGRAKGFAFVEFSSMEDAKEAMDSC 522
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ +++ GR++++ F + G S Q ++ L T + L++
Sbjct: 523 NNTEVEGRSIRLEFSQG-----GGPQGGGRGGSVQS-----KTLFVRGLSEDTTEETLKE 572
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF G ++A+++ +R TG S+GFGFV F +AED ++A +AM E++G + L+ A
Sbjct: 573 AFDGS---INARIVTDRDTGASKGFGFVDFSSAEDAKAAREAMEDGEIDGNKVTLDFA 627
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS-RGFGFVTMGSVEEAKEAIRL 173
L+V N+PYS ++ L E+F A +I D S +G +V + EA +A+
Sbjct: 378 LFVKNIPYSTSAEELQEIFENA-----KDIRIPTGNDGSNKGIAYVEFSTEAEANKALEE 432
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGFVDSPHKIYAGNLGWGLTSQG 231
G++I GR++ V+F G K QNS +G + NL + T
Sbjct: 433 KQGAEIEGRSLFVDF-----------TGEKSQNSGGRRGPAGDSKVLVVNNLSYSATEDS 481
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
LR+ F+ + + + GR++GF FV F + ED + A+D+ N EVEGR +RL
Sbjct: 482 LREVFE-----KATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRL 534
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V L T +L E F G++ +A IV DR T S+GFGFV S E+AK A
Sbjct: 556 LFVRGLSEDTTEETLKEAFD--GSI-NARIVTDRDTGASKGFGFVDFSSAEDAKAAREAM 612
Query: 175 DGSQIGGRTVKVNFPEVPRG 194
+ +I G V ++F + P+G
Sbjct: 613 EDGEIDGNKVTLDFAK-PKG 631
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG L ++T + L E+F G VAS + D VT RS G+ +V + + + A+
Sbjct: 43 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 102
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ S I GR ++ + + P L+ + QG I+ NL + ++
Sbjct: 103 EQLNYSLIKGRACRIMW---------SQRDPALRKTGQG------NIFIKNLDEQIDNKA 147
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
L D F +LS KV + + GRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 148 LHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGM 195
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL +T ++F + G V SA I D +SRGFGFV + EEA++A+
Sbjct: 231 IYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDE-QGQSRGFGFVNFETHEEAQKAVETL 289
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-QGFVDSPHK-----IYAGNLGWGLT 228
S+ GR + V+ R ++A +L+ SY Q V+ K +Y NL +
Sbjct: 290 HDSEYHGRKLFVS-----RAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDID 344
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR F+ + SAKV+ + G S+GFGFV F + ++ A+ MN + +PL
Sbjct: 345 DERLRQEFEPFGSITSAKVMRDE-KGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLY 403
Query: 289 LNMANER 295
+++A R
Sbjct: 404 VSLAQRR 410
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + + +L + FA G V S ++ D RS+G+GFV + E A+ AI+
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAV 192
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V + R KL+ F + IY NL +T
Sbjct: 193 NGMLLNDKKVYVGH-HISRKASSRERQSKLEEMKAQFTN----IYVKNLDPEVTQDDFVK 247
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ Q G +++ VI G+SRGFGFV FET E+ Q A++ ++ E GR L ++ A +
Sbjct: 248 LFE-QFGNVTSAVIQTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQK 306
Query: 295 RA 296
+A
Sbjct: 307 KA 308
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E EEE + E+ KV + + LY+ NL + L + F G++ SA+++
Sbjct: 305 QKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDERLRQEFEPFGSITSAKVM 364
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D S+GFGFV S +EA +A+ + IG + + V+
Sbjct: 365 RDE-KGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSL 406
>gi|388510586|gb|AFK43359.1| unknown [Lotus japonicus]
Length = 305
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 87 TEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI-V 145
T Q+++ EE EE RL N+P++ T + +F GTV E+ +
Sbjct: 85 TTQQQQTEEATTEE---------FSTTRLVAQNVPWTSTPEDVRSLFERYGTVLEVELSM 135
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ 205
Y++ RSRG FV M S EEA EA+ + + GR +K+N+ + + +
Sbjct: 136 YNKT--RSRGLAFVEMSSPEEALEALNKLESYEFEGRVLKLNYARPKKKKAPPPVVQRKP 193
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTF 264
++ FV NL + TS+ LR+ F G ++SA+V+F +S G+GFV+F
Sbjct: 194 VTFNLFV--------ANLSYEATSKDLREFFDSGSSQVVSAEVVFHEDPRKSTGYGFVSF 245
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAA---KETKTENSIDGS 315
++ ++ +AL GR LR+ + P+ ++ ++T TE S++G+
Sbjct: 246 KSKKEANAALSEFQEKTFMGRSLRVAPSKRFVQPLEESSAKPEDTSTELSVNGA 299
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGFVTMGS 163
A E ++V L +T+ L F E G V A IV DR++ RS+G G+V + S
Sbjct: 194 AGDSEQRSVFVTQLAARLTARDLGYFFEEKLGDGAVRDARIVTDRLSRRSKGIGYVELRS 253
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG----GERAAMGPKLQNSYQGFVDSPHKIY 219
++ +AI L G+ + G +KV E R G+ + P + + G P ++Y
Sbjct: 254 LDLVSKAIALT-GTVVMGLPIKVQLTEAERNRIHSGDLLNLPPGVTATSHG----PMQLY 308
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L + LT + ++ F+ L + + TGRS+G+ F+ + ED + AL+ M+G
Sbjct: 309 VGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPEDAKMALEQMDG 368
Query: 280 VEVEGRPLRLNMANERA 296
E+ GR LR+N +E+
Sbjct: 369 FELAGRQLRVNTVHEKG 385
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKLMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 157 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 216
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 217 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 270
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 271 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVG 330
Query: 291 MANER 295
ER
Sbjct: 331 HVTER 335
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NL YS T SL EVF +A + I + R++GF FV S+E+AKEA+
Sbjct: 467 LVVNNLSYSATEDSLREVFEKATS-----IRIPQNQGRAKGFAFVEFSSMEDAKEAMDSC 521
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ +++ GR++++ F + G S Q ++ L T + L++
Sbjct: 522 NNTEVEGRSIRLEFSQG-----GGPQGGGRGGSVQS-----KTLFVRGLSEDTTEETLKE 571
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF G ++A+++ +R TG S+GFGFV F +AED ++A +AM E++G + L+ A
Sbjct: 572 AFDGS---INARIVTDRDTGASKGFGFVDFSSAEDAKAAREAMEDGEIDGNKVTLDFA 626
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS-RGFGFVTMGSVEEAKEAIRL 173
L+V N+PYS ++ L E+F A +I D S +G +V + EA +A+
Sbjct: 377 LFVKNIPYSTSAEELQEIFENA-----KDIRIPTGNDGSNKGIAYVEFSTEAEANKALEE 431
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGFVDSPHKIYAGNLGWGLTSQG 231
G++I GR++ V+F G K QNS +G + NL + T
Sbjct: 432 KQGAEIEGRSLFVDF-----------TGEKSQNSGGRRGPAGDSKVLVVNNLSYSATEDS 480
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
LR+ F+ + + + GR++GF FV F + ED + A+D+ N EVEGR +RL
Sbjct: 481 LREVFE-----KATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRL 533
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V L T +L E F G++ +A IV DR T S+GFGFV S E+AK A
Sbjct: 555 LFVRGLSEDTTEETLKEAFD--GSI-NARIVTDRDTGASKGFGFVDFSSAEDAKAAREAM 611
Query: 175 DGSQIGGRTVKVNFPEVPRG 194
+ +I G V ++F + P+G
Sbjct: 612 EDGEIDGNKVTLDFAK-PKG 630
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|429856401|gb|ELA31310.1| RNA recognition motif containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 836
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 16/224 (7%)
Query: 103 EPK-VAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
EPK A EA R L+V +LP + TS SL + F+E V A +V D T SRG+GFVT
Sbjct: 107 EPKSKKARVEANRSLFVRSLPANATSESLTDFFSEHFPVKHATVVLDPTTKASRGYGFVT 166
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER-----AAMGPKLQNSYQGFVDS- 214
+ ++A +A + + S GR ++++ E + AA + Q Q ++
Sbjct: 167 LTDADDANDAKKKLNNSLWEGRRIRIDLAEARHRDNKDSVVGAAASSEKQKRAQALEEAR 226
Query: 215 -PHKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
P K+ NL W + S+ L F+ G++ + G+ +GFGFVT ++ ++
Sbjct: 227 KPPKLIIRNLPWTIKNSEQLSALFRAY-GIVKY-ADLPQNKGKLKGFGFVTLRGRKNAET 284
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDGSE 316
AL ++NG ++GRP+ ++ A +++ K+ K + + +G E
Sbjct: 285 ALKSLNGKVIDGRPIAVDWAVDKS----EWEKQNKDDKNAEGDE 324
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
K A++ + +++ NLP+++T L F + G V A +V DR TDR G GFV
Sbjct: 413 KQASTGNQSTIFIRNLPFTVTDEQLKTHFVQFGPVRYARVVKDRETDRPAGTGFVCFVKE 472
Query: 165 EEAKEAIR 172
E+A+ I+
Sbjct: 473 EDARACIK 480
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related protein NRP [Rattus norvegicus]
Length = 715
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 487 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 542
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 543 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 589
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 590 EETLRESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 646
Query: 289 LNMANER 295
L+ A +
Sbjct: 647 LDWAKPK 653
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 384 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 438
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS---- 214
+ + +A++ G++I GR++ + + GE+ Y+G +S
Sbjct: 439 IEFKTEADAEKTFEEKQGTEIDGRSISLYYT-----GEKGQ-----SQDYRGGKNSTWSG 488
Query: 215 -PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAED 269
+ NL + T + L++ F+ K F + G+S+G+ F+ F + ED
Sbjct: 489 ESKTLVLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFED 540
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL++ N E+EGR +RL + R P
Sbjct: 541 AKEALNSCNKREIEGRAIRLELQGPRGSP 569
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 55/220 (25%)
Query: 105 KVAASD------------EAAR-------------LYVGNLPYSMTS----SSLAEVFAE 135
K A EA + L+VGNL +S ++ + ++++FA+
Sbjct: 279 KEAPGKRKKEMAKQKAAPEAKKQKVEATEPTTSFNLFVGNLNFSKSAPELKTGISDLFAK 338
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D SR FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 339 NDLA-----VVDVRIGVSRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKG- 388
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
++S + + A NL + +T L++ F+ + ++ G+
Sbjct: 389 ---------KDSKKD--RDARTLLAKNLPYKVTQDELKEVFED-----AVEIRLVSKDGK 432
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
S+G ++ F+T D + + G E++GR + L E+
Sbjct: 433 SKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 472
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 157 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 216
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 217 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 270
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 271 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 330
Query: 291 MANER 295
ER
Sbjct: 331 HVTER 335
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica Group]
Length = 323
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGT-VASAEIVYDRVTDRSRGFGFVTMGSVEE 166
DE L++G+L Y M S L+ FA G V S +++ ++ + S G+GF+ S
Sbjct: 123 GGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAA 182
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNL 223
A+ A+ F+G + + K+N+ G RAA D P H I+ G+L
Sbjct: 183 AEYALANFNGRMMLNVDQLFKLNWASSGAGERRAA------------DDGPEHTIFVGDL 230
Query: 224 GWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L +AF+ P + AKV+F++ TGRS+G+GFV F + A+ MNG +
Sbjct: 231 ASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATL 290
Query: 283 EGRPLRLNMA 292
R +RL A
Sbjct: 291 STRQMRLGPA 300
>gi|354502803|ref|XP_003513471.1| PREDICTED: nucleolin [Cricetulus griseus]
Length = 762
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 531 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQQGKSKGYAFIEFASFEDAK 586
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GRT+++ + PRG A P ++ L T
Sbjct: 587 EALNSCNKMEIEGRTIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 633
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F+G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 634 EETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 690
Query: 289 LNMANER 295
L+ A +
Sbjct: 691 LDWAKPK 697
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 112 AAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
AAR L NL +++T L EVF +A EI +S+G ++ S +A++
Sbjct: 441 AARTLLAKNLSFNITEDELKEVFEDA-----LEIRLVSQDGKSKGIAYIEFKSEADAEKN 495
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ G++I GR+V + + G+R K +++ G + NL + T +
Sbjct: 496 LEEKQGAEIDGRSVSLYY--TGEKGQRQERTGK-NSTWSG---ESKTLVLSNLSYSATEE 549
Query: 231 GLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
L++ F+ K F + G+S+G+ F+ F + ED + AL++ N +E+EGR
Sbjct: 550 TLQEVFE--------KATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRT 601
Query: 287 LRLNMANERAPP 298
+RL + R P
Sbjct: 602 IRLELQGPRGSP 613
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 37/206 (17%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAA--RLYVGNLPYSMTSSSL----AEVFAEAGT 138
P ++E +++ V E ++ KV S+ L++GNL + + + L +E+FA+
Sbjct: 327 PGKRKKEMTKQKEVPEAKKQKVEGSESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDL 386
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA 198
V D T +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 387 A-----VVDVRTGTNRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKG---- 433
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
++S + V + + A NL + +T L++ F+ L +++ + G+S+G
Sbjct: 434 ------RDSKK--VRAARTLLAKNLSFNITEDELKEVFED---ALEIRLVSQ--DGKSKG 480
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEG 284
++ F++ D + L+ E +G
Sbjct: 481 IAYIEFKSEADAEKNLE-----EKQG 501
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E R YVGNL + +L E G V + RS+G+ + S E A
Sbjct: 109 AEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSGGRSKGWALIDFASKEAAD 168
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP----KLQNSYQGFVDSPHKIYAGNLG 224
++ ++ R++ V R G AA P + +NS S +I NL
Sbjct: 169 AGVKALHDTECRARSIIV---RAERPGGAAATKPPREIRPENS------SGLQIVVRNLP 219
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W TS LR FQ ++ AK TGRS+G+G V FET E Q+A+ NGVE+EG
Sbjct: 220 WSTTSDDLRQVFQQVGTVVDAKSTCHDDTGRSKGWGTVLFETQEQAQAAIAGFNGVELEG 279
Query: 285 RPLRLNM 291
RP+++ +
Sbjct: 280 RPMQIKI 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
++ RLYVGN+P+S T L +F +A + EI R +RSRG+ V+ A+ A
Sbjct: 7 QSNRLYVGNIPWSTTVEELQGLFTDAENI---EIPTGR-QNRSRGYALVSFSDESAAQSA 62
Query: 171 IRLFDGSQIGGRTVKVN----FPEVPRGGERAAMGPKLQNSYQ-GFVDSPHKIYAGNLGW 225
++ +G +G R + V P+ P+ R + G +Q + + Y GNL W
Sbjct: 63 MQAMNGHALGDRNISVRADNPLPKAPKSSSRGSGGAPVQRPTNLPEAEEGCRCYVGNLAW 122
Query: 226 GLTSQGLRDAFQ--GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
Q L + Q G P L + + GRS+G+ + F + E + + A++ E
Sbjct: 123 ETDEQALIEHCQTIGHPVLRCE--VARQSGGRSKGWALIDFASKEAADAGVKALHDTECR 180
Query: 284 GRPLRLNMANERAPPVLPAAKETKTENS 311
R + + +E + ENS
Sbjct: 181 ARSIIVRAERPGGAAATKPPREIRPENS 208
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSR-GFGFVTMGSVEEAKEAIR 172
LYVGNL +T L E+FA AG V +A+I+ DR + +GFV + A++AI+
Sbjct: 25 HLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G +I VK N + H ++ G+L + L
Sbjct: 85 TLNGRKIFDAEVKQNKEDT---------------------QHHHHVFVGDLSPEVNDDVL 123
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF + A+V+++ +G+SRG+GF++F ED + A++ MNG + R +R+N A
Sbjct: 124 AKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWA 183
Query: 293 NER 295
N++
Sbjct: 184 NQK 186
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 117/224 (52%), Gaps = 20/224 (8%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
P+ +++ EEE E V ++ + V +A L+VGNL +++ L F E G ++ I
Sbjct: 211 PQKKRKAEEEAEPVAKKAKVDVPEG-ASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRI 269
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-------PEVPRGGER 197
V DR + RSRGFG+V +VE+A +A +++ GR + +++ PR ER
Sbjct: 270 VTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPR--ER 327
Query: 198 AAMGPKLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
A N + F D SP ++ GN+ + +++ F + ++ + +
Sbjct: 328 A------DNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDS 381
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
GR +GFG+V F + ++ ++AL+A NG ++ GR +RL+ + + P
Sbjct: 382 GRPKGFGYVQFSSVDEARAALEAENGADLGGRSIRLDFSTPKQP 425
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 177 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 236
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 237 KDEESVPLAIQL-TGQKLLGIPIIAQLTEAEK--NRQARNPEANASGNQNSIPFHRLYVG 293
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 294 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 351
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 352 DLAGRPIRVGLGNDKFTP 369
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+S++ +++G+L M + L F+ AG V S +I+ ++ T +S +GFV + A
Sbjct: 28 SSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAA 87
Query: 168 KEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++ ++ ++G+ + + ++N+ G +RA G S I+ G+L
Sbjct: 88 EKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAETG------------SDFSIFVGDLAS 135
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T LRD F + P + AKV+ + TG S+G+GFV F + A+ MNG+
Sbjct: 136 DVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSS 195
Query: 285 RPLRLNMANERAP 297
RP+R+ +A + P
Sbjct: 196 RPMRVGVATPKKP 208
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F + G V S +I +G GFV A+EAI+
Sbjct: 246 IFVGGLDSDVTDEELRQSFTQFGEVVSVKI------PAGKGCGFVQFSDRSSAQEAIQKL 299
Query: 175 DGSQIGGRTVKVNFPEVP 192
G+ IG + V++++ P
Sbjct: 300 SGAIIGKQAVRLSWGRSP 317
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|241953527|ref|XP_002419485.1| poly uridylate-binding protein, putative; poly(A)+ RNA-binding
protein, putative [Candida dubliniensis CD36]
gi|223642825|emb|CAX43080.1| poly uridylate-binding protein, putative [Candida dubliniensis
CD36]
Length = 497
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAAR------LYVGNLPYSMTSSSLAEVFA 134
S + E E ++ ++ + ++E++ A++ E R LYVGNLP S + + E+F+
Sbjct: 32 STESTEKESQQAQQPPSQDDEKQVNAASAKEGGREVSNKILYVGNLPKSASEEMIQELFS 91
Query: 135 EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG 194
G V + + F+ + E A A+ +G + +KVN+
Sbjct: 92 VDGNPVKTIKVLNDKNKAGFNYAFIEYDTNEAADMALNTLNGRLVDNVEIKVNW-----A 146
Query: 195 GERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
+ AA+ N+ + + I+ G+L + +GLR+AF L A V+++ T
Sbjct: 147 FQSAAIAGNPNNTEEPLFN----IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTS 202
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
RSRG+GFVTF D + AL MNG + GR +R N A+ +
Sbjct: 203 RSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWASHK 243
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 155 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 214
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 215 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 268
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 269 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 328
Query: 291 MANER 295
ER
Sbjct: 329 HVTER 333
>gi|395823283|ref|XP_003803977.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Otolemur garnettii]
Length = 700
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 476 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 531
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 532 EALNSCNKREIEGRAIRLEL-QAPRGSPNARSQPS------------KTLFVKGLSEDTT 578
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 579 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 635
Query: 289 LNMANER 295
L+ A +
Sbjct: 636 LDWAKPK 642
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A +I +S+G +
Sbjct: 373 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----MDIRIVSKDGKSKGIAY 427
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS--- 214
+ + +A++ G++I GR++ + + G K QN Y+G +S
Sbjct: 428 IEFKTEADAEKTFEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWS 476
Query: 215 --PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAE 268
+ NL + T + L++ F+ K F + G+S+G+ F+ F + E
Sbjct: 477 GESKTLVLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFE 528
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAPP 298
D + AL++ N E+EGR +RL + R P
Sbjct: 529 DAKEALNSCNKREIEGRAIRLELQAPRGSP 558
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 142 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 201
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 202 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 255
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 256 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 315
Query: 291 MANER 295
ER
Sbjct: 316 HVTER 320
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 94 EEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
EEE E+E + + ++V L + + L F + G V A+IV DRV+ RS
Sbjct: 158 EEELNEDERDKRT--------VFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 209
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD 213
+G G+V AI+L G ++ G + E + R A P+ +S Q
Sbjct: 210 KGVGYVEFKDESSVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEA-SSGQSASA 265
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
H++Y GN+ + +T +++ F+ P G L + + TGRSRG+GFV F +
Sbjct: 266 PFHRLYVGNIHFSITENDIQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQARE 323
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPP 298
AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 324 ALEKMNGFDLAGRPIRVGLGNDKFTP 349
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 90 EEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
E E+ +A E +AS RLYVGN+ +S+T + + VF G + ++ D
Sbjct: 245 EAEKNRQARNPEASSGQSASAPFHRLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE- 303
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
T RSRG+GFV +A+EA+ +G + GR ++V
Sbjct: 304 TGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRV 340
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 134 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 193
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 194 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 247
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 248 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 307
Query: 291 MANER 295
ER
Sbjct: 308 HVTER 312
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 129 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 188
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 189 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 242
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 243 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 302
Query: 291 MANER 295
ER
Sbjct: 303 HVTER 307
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+A+ +A LY+G+L + L E+F G VAS + D VT RS G+ +V V +
Sbjct: 3 SANFSSASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQVAD 62
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + ++I G+ ++ + + R+ +G I+ NL G
Sbjct: 63 AERALDSMNFTEIKGKPCRIMWSQRDPSMRRSGVG---------------NIFVKNLHEG 107
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ ++ L D F +LS KV+ ++ TG S+G+G+V +ET E SA++ ++G+ ++G+
Sbjct: 108 IDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLIDGKE 167
Query: 287 LRLNMANER 295
+++ + R
Sbjct: 168 VQVGVFMRR 176
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL- 173
+++ N+P+ T L E F G V SA+ + S GFGFV + E A A++
Sbjct: 188 VFIKNIPFEWTEDKLREEFEGFGEVVSAK---PKEVQGSLGFGFVNFATHEAAAAAVKEM 244
Query: 174 ----FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG-FVDSPHK-----IYAGNL 223
F ++ G KV F V R ++A +L+ Y+ +D K +Y NL
Sbjct: 245 NDKEFTVTEDGEEVTKVLF--VGRAQKKAERERELRAKYEAEKIDRIAKFQGVNLYVKNL 302
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T LRD F + SA+V+ + TG SRGFGFV + T ED A++ MNG +
Sbjct: 303 DDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVNEMNGKIIL 362
Query: 284 GRPLRLNMANER 295
G+P+ + +A R
Sbjct: 363 GKPIFVALAQRR 374
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 75 FQVTEDSQD--------EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTS 126
F VTED ++ + + E E E A E E+ A + LYV NL ++T
Sbjct: 249 FTVTEDGEEVTKVLFVGRAQKKAERERELRAKYEAEKIDRIAKFQGVNLYVKNLDDTVTD 308
Query: 127 SSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
L + F+ GT+ SA ++ D T SRGFGFV + E+A A+ +G I G+ + V
Sbjct: 309 DVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVNEMNGKIILGKPIFV 368
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ AR+YVG+L YS++ + L +VF GT+ + ++ R +RS+GF F+ + E A+ A
Sbjct: 154 QGARIYVGSLDYSLSEADLRQVFGSFGTIVNIDM--PREGNRSKGFCFIEYTTQESAEMA 211
Query: 171 IRLFDGSQIGGRTVKVNFP-----------EVPRGGERAAMG-PKLQNSYQGFVDSPH-- 216
+ + + GR +KV P G +G P L PH
Sbjct: 212 LATMNRFVLKGRPIKVGRPTNAIVSNNQNNNNSMGNHTGMVGMPVLPPENTNANIPPHQI 271
Query: 217 -------KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI--FERYTGRSRGFGFVTFETA 267
+IY G++ + T LR F+ +LS ++I E+ G RG+GF+ F T
Sbjct: 272 PQNPPQNRIYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVEK-PGTHRGYGFIEFGTP 330
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAP 297
+ + A++ MNG EV G+ L++N+A P
Sbjct: 331 DQAKLAIETMNGFEVGGKQLKVNVATALKP 360
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa Japonica Group]
Length = 323
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGT-VASAEIVYDRVTDRSRGFGFVTMGSVEE 166
DE L++G+L Y M S L+ FA G V S +++ ++ + S G+GF+ S
Sbjct: 123 GGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAA 182
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNL 223
A+ A+ F+G + + K+N+ G RAA D P H I+ G+L
Sbjct: 183 AEYALANFNGRMMLNVDQLFKLNWASSGAGERRAA------------DDGPEHTIFVGDL 230
Query: 224 GWGLTSQGLRDAFQ-GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
+T L +AF+ P + AKV+F++ TGRS+G+GFV F + A+ MNG +
Sbjct: 231 ASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATL 290
Query: 283 EGRPLRLNMANER 295
R +RL A +
Sbjct: 291 STRQMRLGPAANK 303
>gi|313244755|emb|CBY15469.1| unnamed protein product [Oikopleura dioica]
Length = 2588
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 27/221 (12%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
+QE+ + A + + + VA ++YVG++ Y + +++ + F G V S ++ YD
Sbjct: 2197 QQEKNTKMAATQLQRQRAVAI---MCKIYVGSIYYEIGEATIRQSFETFGPVRSIDMSYD 2253
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
+ T+R +GF F+ E A A+ IGGR VKV G + +G Q +
Sbjct: 2254 QGTNRHKGFCFLEFECPEAAFLALEHMQSITIGGRAVKV--------GRLSNIG---QVA 2302
Query: 208 YQGFV-------DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
Q F+ H++Y N+ + ++ F+ +LS +++ TGR + +G
Sbjct: 2303 AQHFIAQFGNEAAKYHRVYIANIHVNIVDTDIKAVFESFGRVLSCQLVKNVDTGRHKNYG 2362
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLP 301
FV ++ ++ ++ A+ AMNG ++ G+ +R+ P V+P
Sbjct: 2363 FVEYDNSQSMKEAISAMNGFDLGGQCIRV------GPCVVP 2397
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +YVG L +T + L E+F ++G V + + DRVT +G+GFV E
Sbjct: 6 IAERNQDATIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKSLDVGANIFIGNLDL 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 148 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 207
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 208 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 261
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 262 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 321
Query: 291 MANER 295
ER
Sbjct: 322 HVTER 326
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 120 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 179
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 180 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 233
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 234 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 293
Query: 291 MANER 295
ER
Sbjct: 294 HVTER 298
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKRA--AAMANNLQKGSAG----PMRLYVGSLHFNITED 263
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 264 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 323
Query: 291 MANER 295
ER
Sbjct: 324 HVTER 328
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P ++ H++Y G
Sbjct: 248 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPDAHSNNNQQSIPFHRLYVG 304
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 305 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 362
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 363 DLAGRPIRVGLGNDK 377
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 127 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 186
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 187 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 240
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 241 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 300
Query: 291 MANER 295
ER
Sbjct: 301 HVTER 305
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 156 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 215
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P ++ H++Y G
Sbjct: 216 KNEESVPLAIQL-TGQKLLGIPIIAQLTEAEKN--RQARNPDAHSNNNQQSIPFHRLYVG 272
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 273 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 330
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 331 DLAGRPIRVGLGNDK 345
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 118 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 177
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 178 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 231
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 232 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 291
Query: 291 MANER 295
ER
Sbjct: 292 HVTER 296
>gi|84453184|dbj|BAE71189.1| putative DNA binding protein [Trifolium pratense]
Length = 253
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+DE L++G+L Y M + L + F+ G V + +++ ++ T++S G+GF+ S A+
Sbjct: 64 ADEVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAE 123
Query: 169 EAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH-KIYAGNLGW 225
++ ++G+ + GG+ ++N+ G +R DSP I+ G+L
Sbjct: 124 RILQQYNGNIMPNGGQNFRLNWATFSSGEKRHD-------------DSPDFTIFVGDLAA 170
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T L + F+ + + AKV+ +R TGR++G+GFV F + A+ M GV
Sbjct: 171 DVTDYHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCST 230
Query: 285 RPLRLNMANER 295
RP+R+ A+ +
Sbjct: 231 RPMRIGPASNK 241
>gi|296424904|ref|XP_002841985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638239|emb|CAZ86176.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S +A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V + + +
Sbjct: 49 SHTSASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGE 108
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
A+ + + I GR ++ + + P L+ + QG ++ NL +
Sbjct: 109 RALEELNYTLIKGRPCRIMWSQ---------RDPALRKTGQG------NVFIKNLDTAID 153
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + ++ SRG+GFV +ETAE +A+ +NG+
Sbjct: 154 NKALHDTFAAFGNILSCKVAQDEFSN-SRGYGFVHYETAEAANNAIKHVNGM 204
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G + S ++ D ++ SRG+GFV + E A AI+
Sbjct: 143 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFSN-SRGYGFVHYETAEAANNAIKHV 201
Query: 175 DGSQIGGRTVKV--NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + + V V + P+ R + M N +Y N+ +T +
Sbjct: 202 NGMLLNEKKVFVGHHIPKKDRQSKFDEMKANFTN-----------VYVKNIDPEVTDEEF 250
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR---PLRL 289
R F+ + SA + ++ G SRGFGFV F+ + A++ ++ E++G+ PL L
Sbjct: 251 RTMFENYGPITSASLSRDQ-DGVSRGFGFVNFQEHQHAAKAVEELHESELKGQTLYPLEL 309
Query: 290 -NMANERAPPVLPAAKETKTENSIDGSEL 317
+A+ R T++ S+ L
Sbjct: 310 RKLASTRVSICTSRISMTRSTTSVSARSL 338
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G L +T L + F + S +V + T RS G+ +V + D + AL+ +
Sbjct: 55 LYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERALEEL 114
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP R+ M ++R P
Sbjct: 115 NYTLIKGRPCRI-MWSQRDP 133
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ +S E ++VG+L + M + L FA G ++S +++ ++ T S G+GFV S
Sbjct: 72 HLGSSAENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSH 131
Query: 165 EEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGN 222
A + ++ + G + + ++N+ G +R+ P L I+ G+
Sbjct: 132 GTADKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDL------------SIFVGD 179
Query: 223 LGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
L +T L + F + P + +AKV+F+ TGRS+G+GFV F + A+ MNGV
Sbjct: 180 LAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVY 239
Query: 282 VEGRPLRLNMANER 295
RP+R+ A R
Sbjct: 240 CSSRPMRIGAATPR 253
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAE-AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T S L E F +V +A++V+D T RS+G+GFV G E +A+
Sbjct: 175 IFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTE 234
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ-NSYQGFVDSPHK-IYAGNLGWGLTSQG 231
+G R +++ PR G + S Q DS + I+ G L +T++
Sbjct: 235 MNGVYCSSRPMRIG-AATPRKTSGYQQGSQSNGTSSQSEADSTNTTIFVGGLDPNVTAED 293
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L+ F ++S K+ +G GFV F + + AL +NG + + +RL+
Sbjct: 294 LKQPFSQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSW 347
Query: 292 ANERAP 297
R+P
Sbjct: 348 G--RSP 351
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L ++T+ L + F++ G + S +I +G GFV + A+EA++
Sbjct: 280 IFVGGLDPNVTAEDLKQPFSQYGEIVSVKI------PVGKGCGFVQFANRNNAEEALQKL 333
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+G+ IG + V++++ P + RA G +Y G
Sbjct: 334 NGTTIGKQMVRLSWGRSPANKQFRADFGNAWSGAYYG 370
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V + + + A
Sbjct: 56 HSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERA 115
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + I GR ++ + + P L+ + QG ++ NL + ++
Sbjct: 116 LEDLNYTLIKGRPCRIMWSQ---------RDPALRKTGQG------NVFIKNLDTAIDNK 160
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
L D F +LS KV + Y G S+G+GFV +ETAE +A+ +NG+
Sbjct: 161 ALHDTFAAFGNILSCKVAQDEY-GNSKGYGFVHYETAEAATNAIKHVNGM 209
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G + S ++ D + S+G+GFV + E A AI+
Sbjct: 148 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHV 206
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V G A + Q+ ++ + IY N+ +T + R
Sbjct: 207 NGMLLNEKKVFV--------GHHIAKKDR-QSKFEEMKANFTNIYVKNVEQDVTDEEFRG 257
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + SA + + TG+SRGFGFV F E +A++A+N E++G+ L + A +
Sbjct: 258 LFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQK 317
Query: 295 R 295
+
Sbjct: 318 K 318
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ +T +F + G + SA + D T +SRGFGFV E A A+
Sbjct: 241 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEAL 300
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGF-VDSPHK-----IYAGNLGWGLT 228
+ ++ G+ + V R ++ +L+ Y+ ++ K +Y NL +
Sbjct: 301 NEYELKGQKLYVG-----RAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDID 355
Query: 229 SQGLRDAFQGQPGLLSAKVIFE 250
+ LR+ F + SAKV+ E
Sbjct: 356 DEKLRELFSSYGNITSAKVMRE 377
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 215 PHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
PH +Y G L +T L + F + S +V + T RS G+ +V + D +
Sbjct: 55 PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 114
Query: 273 ALDAMNGVEVEGRPLRLNMANERAP 297
AL+ +N ++GRP R+ M ++R P
Sbjct: 115 ALEDLNYTLIKGRPCRI-MWSQRDP 138
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 250 ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+++ G+S+GFGFV F ++ A+ MN V G+PL + +A +
Sbjct: 436 KKHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRK 481
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
S K++ G + + GLR+AF +L AK+I +R TGRSRGFGF+TF T+E+ SA
Sbjct: 38 SSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSA 97
Query: 274 LDAMNGVEVEGRPLRLNMANERAPP 298
L AM+ E++GR +R+N A ERA P
Sbjct: 98 LQAMDNKELDGRTVRVNYATERARP 122
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A+L++G + YS + L E F+ G V A+I+ DR T RSRGFGF+T + EEA A+
Sbjct: 39 SAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSAL 98
Query: 172 RLFDGSQIGGRTVKVNF 188
+ D ++ GRTV+VN+
Sbjct: 99 QAMDNKELDGRTVRVNY 115
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 200 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 259
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 260 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 313
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 314 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 373
Query: 291 MANER 295
ER
Sbjct: 374 HVTER 378
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L S+T S L E+F++AG V S + D + RS G+ +V + +A A+ L
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELL 100
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ ++V + R+ I+ NL + + L D
Sbjct: 101 NFAPLNGKPIRVMYSNRDPSSRRSGSA---------------NIFIKNLDKAIDHKTLHD 145
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV + G+S+GFGFV ++ E QSA+ ++NG+ + +P+
Sbjct: 146 TFSAFGNILSCKVATDE-MGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVY------ 198
Query: 295 RAPPVLPAAKETKTENSIDGSEL 317
V P ++ + ENS+D ++
Sbjct: 199 ----VGPFLRKQERENSVDKTKF 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S T L ++F G + SA I+ + +SR FGF+ S ++A A+
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKSPDDAARAVEEL 278
Query: 175 DGSQIG------GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+G +I GR K + E+ + YQG +Y NL +
Sbjct: 279 NGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGL-----NLYMKNLDDSIG 333
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F + S K++ + G S+G GFV F T E+ AL MNG + G+PL
Sbjct: 334 DDQLCELFSNYGKITSCKIMRDA-NGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLY 392
Query: 289 LNMANER 295
+ A +
Sbjct: 393 VAFAQRK 399
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A +++ NL ++ +L + F+ G + S ++ D + +S+GFGFV E A+ AI
Sbjct: 126 SANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEM-GQSKGFGFVQYDKGEAAQSAI 184
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSP--HKIYAGNLGWGLT 228
+ +G I + V V GP L+ + VD + ++ NL T
Sbjct: 185 KSLNGMLINDKPVYV--------------GPFLRKQERENSVDKTKFNNVFVKNLSESTT 230
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L F G G +++ VI G+SR FGF+ F++ +D A++ +NG ++ +
Sbjct: 231 KEDLVKIF-GAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWY 289
Query: 289 LNMANERA 296
+ A +++
Sbjct: 290 VGRAQKKS 297
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E E E E+ A+D + LY+ NL S+ L E+F+ G + S +I+
Sbjct: 294 QKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIM 353
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
D S+G GFV + EEA +A+ +G I G+ + V F + R +R AM
Sbjct: 354 RD-ANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ--RKEDRKAM 405
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S+E ++VG L +++ L + F E GT+ A ++ D + RS+G+G+V + E AK
Sbjct: 259 SNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAK 318
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGL 227
A+ +I GR V ++ P PR + ++ + P ++ GNL +
Sbjct: 319 AAVAANGTKEIDGRMVNLDLPN-PRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNA 377
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T L AF G + S ++ + +GR +GFG+VTF + + ++ MNG + GRP
Sbjct: 378 TEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNGHFIAGRPC 436
Query: 288 RLNMANER 295
RL+ + R
Sbjct: 437 RLDFSTPR 444
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + Q L F+ ++ A+VI + +GRS+G+G+V FET E ++A+ A
Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKE 305
E++GR + L++ N R P A++
Sbjct: 325 GTKEIDGRMVNLDLPNPRPANPQPYAQQ 352
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 228 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 287
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 288 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 341
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 342 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 401
Query: 291 MANER 295
ER
Sbjct: 402 HVTER 406
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 24/188 (12%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR-VTDRSRGFGFVTMGSVEEAKEAIR 172
LYVGNL +T L E+FA AG V SA+I+ DR +GFV + A++A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---DSPHK--IYAGNLGWGL 227
+G +I ++VN+ +YQG D+ H ++ G+L +
Sbjct: 83 TLNGRKIFDAEIRVNW------------------AYQGNQNKEDTQHHYHVFVGDLSPEV 124
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L AF L A+V+++ +G+SRG+GF++F D + A+ +MNG + R +
Sbjct: 125 NDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAI 184
Query: 288 RLNMANER 295
R+N AN++
Sbjct: 185 RVNWANQK 192
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 125 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 184
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 185 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 238
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 239 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 298
Query: 291 MANER 295
ER
Sbjct: 299 HVTER 303
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 124 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 183
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 184 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 237
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 238 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 297
Query: 291 MANER 295
ER
Sbjct: 298 HVTER 302
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 50 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 109
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 110 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 163
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 164 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 223
Query: 291 MANER 295
ER
Sbjct: 224 HVTER 228
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ D R ++V + + L F G V A+IV DRVT RS+G G+V
Sbjct: 167 EPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEF 226
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
E +A+ L G ++ G + E + RAA P + G +P H++Y
Sbjct: 227 KDEESVPQALEL-TGQKLKGVPIIAQLTEAEKN--RAAR-PSEGGTAPGANGAPFHRLYV 282
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFER---YTGRSRGFGFVTFETAEDLQSALDAM 277
GN+ + +T + L++ F+ P +VI +R GRS+G+GFV F ++AL M
Sbjct: 283 GNIHFSVTEKDLQEIFE--PFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEM 340
Query: 278 NGVEVEGRPLRLNMANERAPP 298
NG E+ GR +R+ + N++ P
Sbjct: 341 NGFELAGRQIRVGLGNDKFTP 361
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+++A LYVGNL + + L ++F+ GTV+ IV DR T S G FV + A
Sbjct: 1 NEDAKALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAA 60
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
A++ +G + + V++ + A K +N+ S I+ GNL +
Sbjct: 61 IALKTINGRILYNKEVRIQW---------AFQKEKTENTA-----SHSHIFVGNLSGDVA 106
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L AFQ A+V+++ TGRS+GFGFV+F T E + AL M+G +V +R
Sbjct: 107 DPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIR 166
Query: 289 LNMANERAPPV 299
A+ + V
Sbjct: 167 CGWAHHKTEAV 177
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
+ ++VGNL + L + F G + A +++D T RS+GFGFV+ + E A++A+
Sbjct: 94 SHIFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALA 153
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH----KIYAGNLGWGLT 228
DG+Q+G ++ + A G + VD +Y GNL +
Sbjct: 154 EMDGAQVGQWKIRCGWAHHK---TEAVTGLDIDT-----VDRADPANTNVYVGNLPTEVM 205
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ LR AF + K + G+GFVT+ A+ MNG E++G+ ++
Sbjct: 206 EEDLRAAFGAYGEITGLKPCHK------GGYGFVTYRDHSAAVQAIVGMNGKELKGKMVK 259
Query: 289 LNM 291
+
Sbjct: 260 CSW 262
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 134 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 193
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 194 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 247
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 248 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 307
Query: 291 MANER 295
ER
Sbjct: 308 HVTER 312
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L Y M + L F +G V + +++ +R + S G+GFV S A++A++ F
Sbjct: 101 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 160
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + R K+N+ G +R+ + S H I+ G+L +T L
Sbjct: 161 AGHVMPNTDRAFKLNWASYSVGEKRSELA------------SDHSIFVGDLAVDVTDDML 208
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + + AKVI + TGRSRG+GFV F D A+ MNGV RP+R+
Sbjct: 209 MELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGP 268
Query: 292 ANER 295
A R
Sbjct: 269 ATPR 272
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 104 PKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMG 162
P+ + D R +YVG L +++ L + FA+ G VAS +I + GFV
Sbjct: 283 PRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC------GFVQFV 336
Query: 163 SVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
+ +A+EA++ GS IG + V++++ P
Sbjct: 337 NRADAEEALQALSGSTIGKQAVRLSWGRSP 366
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A +EA L++G+L Y M + + FA G V S +++ D+ T + +G+GF+ S
Sbjct: 77 AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAG 136
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A+ ++ F+G+ + T ++N+ GE+ G + + I+ G+L
Sbjct: 137 AERVLQTFNGAMMPNVEMTYRLNWATA---GEKHDDG------------ADYTIFVGDLA 181
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F+ Q P + AKV+ ++ T RS+G+GFV F + A+ MNG+
Sbjct: 182 ADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICS 241
Query: 284 GRPLRLNMA--NERAPPV---LPAAKETKTENSIDGSELL 318
RP+R+ A ++A V +P A+ +T+N S +
Sbjct: 242 SRPMRIGPAANKQKANGVQEKVPTAQGIQTDNDPSNSTIF 281
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F A+ +V A++V D++T RS+G+GFV G E A+
Sbjct: 175 IFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTE 234
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMG-----PKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+G R +++ P ++ A G P Q S I+ G L T
Sbjct: 235 MNGMICSSRPMRIG----PAANKQKANGVQEKVPTAQGIQTDNDPSNSTIFVGGLDPSAT 290
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L+ F ++ K+ + G FV + + + AL + G +EG+ +R
Sbjct: 291 EDVLKQVFTPYGEVVHVKIPVGKRCG------FVQYASRSSAEEALLMLQGTMIEGQNVR 344
Query: 289 LNMANERAPPVLPAAKETKTENSIDGS 315
L+ P+ K+ + N G+
Sbjct: 345 LSWGRS------PSNKQVQDFNQWGGA 365
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
QE+ + ++ + +P + ++VG L S T L +VF G E+V+ +
Sbjct: 260 QEKVPTAQGIQTDNDP------SNSTIFVGGLDPSATEDVLKQVFTPYG-----EVVHVK 308
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
+ R GFV S A+EA+ + G+ I G+ V++++ P
Sbjct: 309 IPVGKR-CGFVQYASRSSAEEALLMLQGTMIEGQNVRLSWGRSP 351
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 207 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 266
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 267 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 320
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 321 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 380
Query: 291 MANER 295
ER
Sbjct: 381 HVTER 385
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L ++T S L ++F +AG V S + D T RS G+G+V + ++A A+
Sbjct: 18 ASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 77
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L + + + G+ +++ + + P ++ S I+ NL + ++ L
Sbjct: 78 LLNFTPLNGKPIRIMY---------SHRDPSIRKS------GTANIFIKNLDKSIDNKAL 122
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS K+ + +G+S+G+GFV F+ E Q+A+D +NG+ + +
Sbjct: 123 HDTFSAFGNILSCKIATDP-SGQSKGYGFVQFDNEESAQNAIDKLNGMLINDK 174
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +++ NL S+ + +L + F+ G + S +I D + +S+G+GFV + E A+ AI
Sbjct: 106 ANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDP-SGQSKGYGFVQFDNEESAQNAID 164
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+G I + V V + R ER A K N +Y NL T +
Sbjct: 165 KLNGMLINDKQVYVG--QFLRKQERETALNKTKFNN-----------VYVKNLSESTTEE 211
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L++ F G+ G++++ V+ G+S+ FGFV FE A+D A++A+NG
Sbjct: 212 DLKNIF-GEFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNG 259
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL S T L +F E G + S ++ D +S+ FGFV + ++A EA+
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDG-DGKSKCFGFVNFENADDAAEAVEAL 257
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQGL 232
+G + + V + E G + + S + VD +Y NL + L
Sbjct: 258 NGKKFDEKEWYVGKAQKKYERELELKG-RFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKL 316
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F + S KV+ + +G SRG GFV F T+E+ AL MNG V +PL + +A
Sbjct: 317 KELFSEFGTITSCKVMRDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALA 375
Query: 293 NER 295
+
Sbjct: 376 QRK 378
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L D F +LS +V + T RS G+G+V + +D ALD +
Sbjct: 20 LYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDLL 79
Query: 278 NGVEVEGRPLRLNMANERAPPV 299
N + G+P+R+ M + R P +
Sbjct: 80 NFTPLNGKPIRI-MYSHRDPSI 100
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E E + E+ +V + LY+ NL S+ L E+F+E GT+ S +++
Sbjct: 273 QKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVM 332
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D + SRG GFV + EEA A+ +G + + + V
Sbjct: 333 RDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYV 372
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L S+T S L E+F++AG V S + D + RS G+ +V + +A A+ L
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELL 100
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ ++V + R+ I+ NL + + L D
Sbjct: 101 NFAPLNGKPIRVMYSNRDPSSRRSGSA---------------NIFIKNLDKAIDHKTLHD 145
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV + G+S+GFGFV ++ E QSA+ ++NG+ + +P+
Sbjct: 146 TFSAFGNILSCKVATDE-MGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVY------ 198
Query: 295 RAPPVLPAAKETKTENSIDGSEL 317
V P ++ + ENS+D ++
Sbjct: 199 ----VGPFLRKQERENSVDKTKF 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S T L ++F G + SA I+ + +SR FGF+ S ++A A+
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKSPDDAARAVEEL 278
Query: 175 DGSQIG------GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+G +I GR K + E+ + YQG +Y NL +
Sbjct: 279 NGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGL-----NLYMKNLDDSIG 333
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F + S K++ + G S+G GFV F T E+ AL MNG + G+PL
Sbjct: 334 DDQLCELFSNYGKITSCKIMRDA-NGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLY 392
Query: 289 LNMANER 295
+ A +
Sbjct: 393 VAFAQRK 399
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A +++ NL ++ +L + F+ G + S ++ D + +S+GFGFV E A+ AI
Sbjct: 126 SANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEM-GQSKGFGFVQYDKGEAAQSAI 184
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSP--HKIYAGNLGWGLT 228
+ +G I + V V GP L+ + VD + ++ NL T
Sbjct: 185 KSLNGMLINDKPVYV--------------GPFLRKQERENSVDKTKFNNVFVKNLSESTT 230
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L F G G +++ VI G+SR FGF+ F++ +D A++ +NG ++ +
Sbjct: 231 KEDLVKIF-GAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWY 289
Query: 289 LNMANERA 296
+ A +++
Sbjct: 290 VGRAQKKS 297
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E E E E+ A+D + LY+ NL S+ L E+F+ G + S +I+
Sbjct: 294 QKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIM 353
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
D S+G GFV + EEA +A+ +G I G+ + V F + R +R M
Sbjct: 354 RD-ANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ--RKEDRKVM 405
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V++ E + + + +YV NL +T + + F+E G V + I+ D +SRGFG
Sbjct: 192 VKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDG-NGKSRGFG 250
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM---GPKLQNSYQGFVDS 214
FV S +EAK+A+ +G+ +G + + V + ER + ++ N G +
Sbjct: 251 FVNFESPDEAKKAVEALNGAMLGSKKLFVG--RAQKKAERQELLKHEKEMVNCNIG-KEK 307
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+Y NL + L++ F + SAKV+ +G S+GFGFV F T+E+ Q AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVM-RHDSGLSKGFGFVCFSTSEEAQKAL 366
Query: 275 DAMNGVEVEGRPLRLNMANER 295
+NG + GR L + MA +
Sbjct: 367 TTLNGTLLHGRSLYIAMAQRK 387
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L+V NL S+ S+SL ++F + G + S ++ + +S+ FGFV S + A A+
Sbjct: 117 ANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALN 174
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + G+ + V+ + + ER A+ K N +Y NLG LT
Sbjct: 175 ALNDTMLDGKKLFVS--KFVKKCERKEASEETKFTN-----------VYVKNLGEDLTED 221
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+RD F + G + VI + G+SRGFGFV FE+ ++ + A++A+NG + + L +
Sbjct: 222 IIRDKFS-EFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVG 280
Query: 291 MANERA 296
A ++A
Sbjct: 281 RAQKKA 286
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L ++ L +VF+ G + S + D ++ +S + +V +A +A+
Sbjct: 29 AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALA 88
Query: 173 LFDGSQIGGRTVKVNFPE---VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +++ G+ +++ + +PR A ++ NL + S
Sbjct: 89 CLNHTKLMGKPMRIMWSHRDPLPRKTGLA------------------NLFVKNLDPSINS 130
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L+D F +LS KV E G+S+ FGFV F++ + +AL+A+N ++G+ L
Sbjct: 131 ASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKL 186
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 89 QEEEEEEEAVEEEEEPKVA--ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV- 145
Q++ E +E ++ E+E ++A+ LYV NL S+ L E F+ G + SA+++
Sbjct: 283 QKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMR 342
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
+D + S+GFGFV + EEA++A+ +G+ + GR++ + + +R M
Sbjct: 343 HD--SGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRIPM 395
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
GF +Y G+L ++ L D F G L+S ++ + +G+S + +V F D
Sbjct: 23 GFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSD 82
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAP 297
AL +N ++ G+P+R+ M + R P
Sbjct: 83 ASKALACLNHTKLMGKPMRI-MWSHRDP 109
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
+I D T SRG GFVTM S+ EA+ A+ DG + GR + V R
Sbjct: 9 QISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMT 68
Query: 203 KLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+SPHKIY GN+ W + Q LR+ F ++S +++ +R GR R +GF+
Sbjct: 69 HTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFL 128
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
+F +AE+L++AL ++ GR + + A+E
Sbjct: 129 SFASAEELEAAL-KLDNTHFHGRNILVRQAHE 159
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGN+ +S+ L E F++ GTV S ++ DR R R +GF++ S EE + A++L
Sbjct: 83 KIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKL 142
Query: 174 FDGSQIGGRTVKV 186
D + GR + V
Sbjct: 143 -DNTHFHGRNILV 154
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 101 EEEP---KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
E++P + A D+ L++G+L Y M S L F ++ T+ S +++ +++T G+G
Sbjct: 2 EQQPGATQAQARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYG 60
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRT---VKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
FV S A++A++ F G+ + RT ++N+ V GG++ G DS
Sbjct: 61 FVEFESHAAAEKALQSFTGA-VMPRTEQAFRLNWACV--GGDKRDSGAD---------DS 108
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
I+ G+L +T L + F+ + P + SAKV+ + +GR RG+GFV F + SA
Sbjct: 109 ---IFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSA 165
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
+ M+GV RP+R+ A +
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPK 187
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 26/197 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T + L E F + +V SA++V D + R RG+GFV G E A+
Sbjct: 109 IFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTE 168
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ--------------GFVDSPHKIY 219
G R +++ P+ ++ P + SYQ F ++ I+
Sbjct: 169 MHGVYCSSRPMRIR-TATPK--KQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNT--TIF 223
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G L ++ L+D F + K+ RG GFV F T + AL ++G
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKI------PPGRGCGFVQFMTRASAEEALKQVHG 277
Query: 280 VEVEGRPLRLNMANERA 296
+ + +RL+ A
Sbjct: 278 SVIGQQTVRLSWGRHPA 294
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +++ L +VF+ G EI Y ++ RG GFV + A+EA++
Sbjct: 222 IFVGGLDQNVSLDDLKDVFSPYG-----EIKYTKIPP-GRGCGFVQFMTRASAEEALKQV 275
Query: 175 DGSQIGGRTVKVNFPEVPRGGER 197
GS IG +TV++++ P +R
Sbjct: 276 HGSVIGQQTVRLSWGRHPANKQR 298
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGNL + +T+ L F++ G V ++YD S+GFG+V VE A++A+ L
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSKGFGYVKFHDVETAEKAVALM 201
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQGL 232
G GR + VNF V +L P +Y GN+ + +T + L
Sbjct: 202 HGQLFEGRHLAVNFARV-----------ELDKPMNHDPTKPPTRTLYIGNIPFEMTDRDL 250
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ ++ +V +R TGR+RGF F E + A ++ GRPLR++ +
Sbjct: 251 NELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTKTPYGRPLRIDYS 310
Query: 293 N 293
+
Sbjct: 311 H 311
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
G++ IY GNL + +T+ L++ F + +++++ Y G S+GFG+V F E
Sbjct: 135 GYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSKGFGYVKFHDVET 193
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
+ A+ M+G EGR L +N A
Sbjct: 194 AEKAVALMHGQLFEGRHLAVNFA 216
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 118 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 177
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 178 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 231
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 232 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 291
Query: 291 MANER 295
ER
Sbjct: 292 HVTER 296
>gi|337278094|ref|YP_004617565.1| RNA-binding protein [Ramlibacter tataouinensis TTB310]
gi|334729170|gb|AEG91546.1| Candidate RNA-binding protein [Ramlibacter tataouinensis TTB310]
Length = 95
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVGNLPYS S + + F++ GTV SA++V DR T RS+GFGFV MGS EA+ AI+
Sbjct: 4 KLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSAIQG 63
Query: 174 FDGSQIGGRTVKVN--FPEVPR-GGERAA 199
G Q GGR + VN P PR GG AA
Sbjct: 64 MHGQQHGGRDLVVNEARPMEPRTGGSGAA 92
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+K+Y GNL + ++ AF + SAKV+ +R TGRS+GFGFV +A + QSA+
Sbjct: 3 NKLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSAIQ 62
Query: 276 AMNGVEVEGRPLRLNMANERAP 297
M+G + GR L +N A P
Sbjct: 63 GMHGQQHGGRDLVVNEARPMEP 84
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P S R+YVGN+ ++T LAEVFA AG +A +++ D+S +GFV
Sbjct: 36 PAFDPSSSCRRVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRK---DKSS-YGFVDYHD 91
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNL 223
A AI G Q+ G+ +KVN+ A G NS + ++ G+L
Sbjct: 92 QSSAALAIMTLHGRQLYGQALKVNW----------AYG----NSQREDTSGHFHVFVGDL 137
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ L F P +A+V+++ TGRS+G+GFV+F ++ QSA++ + G +
Sbjct: 138 SPEVIDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLG 197
Query: 284 GRPLRLNMANE 294
R +R N A +
Sbjct: 198 NRQIRCNWATK 208
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L + ++L F+ + ++A +++D T RS+G+GFV+ + +EA+ AI
Sbjct: 131 HVFVGDLSPEVIDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFRNQQEAQSAIND 190
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-------SYQGFVDSPHK--------- 217
G +G R ++ N+ QN S +G +S ++
Sbjct: 191 LTGKWLGNRQIRCNWATKGVESNEDKQNSDNQNAVVLTNGSSEGGQESTNEEAPENNPAY 250
Query: 218 --IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+Y GNL +T L F L A VI + R +GFGFV + T E+ SA+
Sbjct: 251 TTVYVGNLSHEVTQAELHRHFHA----LGAGVIEDVRVQRDKGFGFVRYNTHEEAASAIQ 306
Query: 276 AMNGVEVEGRPLRLNMANERAPP 298
NG V G+P++ + ++ PP
Sbjct: 307 TGNGKIVCGKPVKCSWGSKPTPP 329
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 52 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 111
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 112 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 165
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 166 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 225
Query: 291 MANER 295
ER
Sbjct: 226 HVTER 230
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 191 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKIGPVKEAQIVKDRVSGRSKGVGYVEF 250
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P + H++Y G
Sbjct: 251 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEKN--RQARNPDSHANSNHQAIPFHRLYVG 307
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L++ F+ P G L + GRS+G+GFV F + AL+ MNG
Sbjct: 308 NIHFSITESDLQNVFE--PFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGF 365
Query: 281 EVEGRPLRLNMANER 295
++ GRP+R+ + N++
Sbjct: 366 DLAGRPIRVGLGNDK 380
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 101 EEEP---KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
E++P + A D+ L++G+L Y M S L F ++ T+ S +++ +++T G+G
Sbjct: 2 EQQPGATQAQARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYG 60
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRT---VKVNFPEVPRGGERAAMGPKLQNSYQGFVDS 214
FV S A++A++ F G+ + RT ++N+ V GG++ G +
Sbjct: 61 FVEFESHAAAEKALQSFTGA-VMPRTEQAFRLNWACV--GGDKRDSG------------A 105
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
I+ G+L +T L + F+ + P + SAKV+ + +GR RG+GFV F + SA
Sbjct: 106 DDSIFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSA 165
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
+ M+GV RP+R+ A +
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPK 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 26/197 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T + L E F + +V SA++V D + R RG+GFV G E A+
Sbjct: 109 IFVGDLAADVTDAMLLETFKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTE 168
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ--------------GFVDSPHKIY 219
G R +++ P+ ++ P + SYQ F ++ I+
Sbjct: 169 MHGVYCSSRPMRIR-TATPK--KQTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNT--TIF 223
Query: 220 AGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G L ++ L+D F + K+ RG GFV F T + AL ++G
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKI------PPGRGCGFVQFMTRASAEEALKQVHG 277
Query: 280 VEVEGRPLRLNMANERA 296
+ + +RL+ A
Sbjct: 278 SVIGQQTVRLSWGRHPA 294
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 194 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 253
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 254 KDEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 310
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 311 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 368
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 369 DLAGRPIRVGLGNDKFTP 386
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 152 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 211
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 212 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGSGG----PMRLYVGSLHFNITED 265
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+R+
Sbjct: 266 MLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVG 325
Query: 291 MANERA 296
ERA
Sbjct: 326 HVTERA 331
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ S L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+ F F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 16/183 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+GNL Y +T+ L VF+ G + + +I+YD SRGFG+V ++ +A+ AI
Sbjct: 194 LYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDN-RGLSRGFGYVEFKNIPDAQTAIDNL 252
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGLR 233
D GR + V F E+ G +N+ +SP K ++ GN+ + ++ + L
Sbjct: 253 DMQVFEGRNLVVQFHR-----EKPGFG---KNNRANSTNSPSKTLFIGNMSFEMSDKDLN 304
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE---VEGRPLRLN 290
D F+ ++ +V +R TG+ RGF F D+ SA A N + V GR LR++
Sbjct: 305 DLFREVRNVVDVRVAIDRRTGQPRGFAHADF---LDIASATHAKNILANKVVYGRELRID 361
Query: 291 MAN 293
++
Sbjct: 362 FSH 364
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y GNL + +T+ L+ F + + K+I++ G SRGFG+V F+ D Q+A+D +
Sbjct: 194 LYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDN-RGLSRGFGYVEFKNIPDAQTAIDNL 252
Query: 278 NGVEVEGRPLRLNMANER 295
+ EGR L + E+
Sbjct: 253 DMQVFEGRNLVVQFHREK 270
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR-VTDRSRGFGFVTMGSVEEAKEAIR 172
LYVGNL +T L E+FA AG V SA+I+ DR +GFV + A +A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---DSPHK--IYAGNLGWGL 227
+G +I ++VN+ +YQG D+ H ++ G+L +
Sbjct: 83 TLNGRKIFDAEIRVNW------------------AYQGNQNKEDTQHHYHVFVGDLSPEV 124
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L AF L A+V+++ +G+SRG+GF++F D + A+ +MNG + R +
Sbjct: 125 NDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAI 184
Query: 288 RLNMANER 295
R+N AN++
Sbjct: 185 RVNWANQK 192
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+S E ++VG+L + M + L FA G ++S +++ ++ T S G+GFV S
Sbjct: 72 GSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGT 131
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ + G + + ++N+ G +R+ P L I+ G+L
Sbjct: 132 AEKVLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDL------------SIFVGDLA 179
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L + F + P + +AKV+F+ TGRS+G+GFV F ++ A+ MNGV
Sbjct: 180 ADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCS 239
Query: 284 GRPLRLNMANER 295
RP+R+ A R
Sbjct: 240 SRPMRIGAATPR 251
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
L +QG ++ G+L + L F + S KVI + TG S G+GFV
Sbjct: 66 LHAHHQGSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVE 125
Query: 264 FETAEDLQSALDAMNGVEVEG--RPLRLNMA 292
F + + L G+ + +P RLN A
Sbjct: 126 FYSHGTAEKVLQNYAGILMPNTEQPFRLNWA 156
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ S L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +A+ ++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN---------KAS-------AHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+ F F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L S+T S L E+F++AG V S + D + RS G+ +V + +A A+ L
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELL 100
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ ++V + R+ I+ NL + + L D
Sbjct: 101 NFAPLNGKPIRVMYSNRDPSSRRSGSA---------------NIFIKNLDKAIDHKTLHD 145
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV + G+S+GFGFV ++ E QSA+ ++NG+ + +P+
Sbjct: 146 TFSAFGNILSCKVATDE-MGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVY------ 198
Query: 295 RAPPVLPAAKETKTENSIDGSEL 317
V P ++ + ENS+D ++
Sbjct: 199 ----VGPFLRKQERENSVDKTKF 217
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A +++ NL ++ +L + F+ G + S ++ D + +S+GFGFV E A+ AI
Sbjct: 126 SANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEM-GQSKGFGFVQYDKGEAAQSAI 184
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSP--HKIYAGNLGWGLT 228
+ +G I + V V GP L+ + VD + ++ NL T
Sbjct: 185 KSLNGMLINDKPVYV--------------GPFLRKQERENSVDKTKFNNVFVKNLSESTT 230
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L F G G +++ VI G+SR FGF+ F++ +D A++ +NG ++ +
Sbjct: 231 KEDLVKIF-GAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWY 289
Query: 289 LNMANERA 296
+ A +++
Sbjct: 290 VGRAQKKS 297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S T L ++F G + SA I+ + +SR FGF+ S ++A A+
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKSPDDAARAVEEL 278
Query: 175 DGSQIG------GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+G +I GR K + E+ + YQG +Y NL +
Sbjct: 279 NGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGL-----NLYMKNLDDSIG 333
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
L + F + S K++ + G S+G GFV F T +Q L MNG + G+PL
Sbjct: 334 DDQLCELFSNYGKITSCKIMRDA-NGVSKGSGFVAFSTLPFIQ--LTEMNGKMISGKPLY 390
Query: 289 LNMANER 295
+ A +
Sbjct: 391 VAFAQRK 397
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E E E E+ A+D + LY+ NL S+ L E+F+ G + S +I+
Sbjct: 294 QKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIM 353
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
D S+G GFV ++ + + +G I G+ + V F + R +R AM
Sbjct: 354 RD-ANGVSKGSGFVAFSTLPFIQ--LTEMNGKMISGKPLYVAFAQ--RKEDRKAM 403
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V++ E + + + +YV NL +T + + F+E G V + I+ D +SRGFG
Sbjct: 192 VKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDG-NGKSRGFG 250
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM---GPKLQNSYQGFVDS 214
FV S +EAK+A+ +G+ +G + + V + ER + ++ N G +
Sbjct: 251 FVNFESPDEAKKAVEALNGAMLGSKKLFVG--RAQKKAERQELLKHEKEMVNCNIG-KEK 307
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+Y NL + L++ F + SAKV+ +G S+GFGFV F T+E+ Q AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVM-RHDSGLSKGFGFVCFSTSEEAQKAL 366
Query: 275 DAMNGVEVEGRPLRLNMANER 295
+NG + GR L + MA +
Sbjct: 367 TTLNGTLLHGRSLYIAMAQRK 387
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L+V NL S+ S+SL ++F + G + S ++ + +S+ FGFV S + A A+
Sbjct: 117 ANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALN 174
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + G+ + V+ + + ER A+ K N +Y NLG LT
Sbjct: 175 ALNDTMLDGKKLFVS--KFVKKCERKEASEETKFTN-----------VYVKNLGEDLTED 221
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+RD F + G + VI + G+SRGFGFV FE+ ++ + A++A+NG + + L +
Sbjct: 222 IIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVG 280
Query: 291 MANERA 296
A ++A
Sbjct: 281 RAQKKA 286
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L ++ L +VF+ G + S + D ++ +S + +V +A +A+
Sbjct: 29 AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALA 88
Query: 173 LFDGSQIGGRTVKVNFPE---VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +++ G+ +++ + +PR A ++ NL + S
Sbjct: 89 CLNHTKLMGKPMRIMWSHRDPLPRKTGLA------------------NLFVKNLDPSINS 130
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L+D F +LS KV E G+S+ FGFV F++ + +AL+A+N ++G+ L
Sbjct: 131 ASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKL 186
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 89 QEEEEEEEAVEEEEEPKVA--ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV- 145
Q++ E +E ++ E+E ++A+ LYV NL S+ L E F+ G + SA+++
Sbjct: 283 QKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMR 342
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
+D + S+GFGFV + EEA++A+ +G+ + GR++ +
Sbjct: 343 HD--SGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYI 381
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 216 HK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
HK +Y G+L ++ L D F G L+S ++ + +G+S + +V F D A
Sbjct: 27 HKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKA 86
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
L +N ++ G+P+R+ M + R P
Sbjct: 87 LACLNHTKLMGKPMRI-MWSHRDP 109
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 16/189 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L F++ G + S +++ +++T + G+GF+ S A+
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 170 AIRLFDGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G++ GP H I+ G+L +
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASF-GSGQKVDAGPD------------HSIFVGDLAPDV 127
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 128 TDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRP 187
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 188 MRISAATPK 196
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV E A+
Sbjct: 118 IFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAE 177
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGER----AAMGP-----KLQNSYQGFVDSPHK----- 217
+G R ++++ P+ G ++ A+ P + Q +V P
Sbjct: 178 MNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCT 237
Query: 218 -IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
I NL +T + L+ AF Q G +VI+ + ++G+G+V F+T + A+
Sbjct: 238 TISVANLDQNVTEEELKKAF-SQLG----EVIYVKIPA-TKGYGYVQFKTRPSAEEAVQR 291
Query: 277 MNGVEVEGRPLRLNMA 292
M G + + +R++ +
Sbjct: 292 MQGQVIGQQAVRISWS 307
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
V NL ++T L + F++ G E++Y ++ ++G+G+V + A+EA++ G
Sbjct: 241 VANLDQNVTEEELKKAFSQLG-----EVIYVKIP-ATKGYGYVQFKTRPSAEEAVQRMQG 294
Query: 177 SQIGGRTVKVNFPEVP 192
IG + V++++ + P
Sbjct: 295 QVIGQQAVRISWSKNP 310
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 16/189 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L F++ G + S +++ +++T + G+GF+ S A+
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 170 AIRLFDGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G++ GP H I+ G+L +
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASF-GSGQKVDAGPD------------HSIFVGDLAPDV 127
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 128 TDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRP 187
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 188 MRISAATPK 196
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV E A+
Sbjct: 118 IFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAE 177
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGE-----RAAMGPKLQNSYQGFVDSPHK------IYA 220
+G R ++++ P+ G + + + + Q +V P I
Sbjct: 178 MNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISV 237
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL +T + L+ AF Q G +VI+ + ++G+G+V F+T + A+ M G
Sbjct: 238 ANLDQNVTEEELKKAF-SQLG----EVIYVKIPA-TKGYGYVQFKTRPSAEEAVQRMQGQ 291
Query: 281 EVEGRPLRLNMA 292
+ + +R++ +
Sbjct: 292 VIGQQAVRISWS 303
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 117 VGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDG 176
V NL ++T L + F++ G E++Y ++ ++G+G+V + A+EA++ G
Sbjct: 237 VANLDQNVTEEELKKAFSQLG-----EVIYVKIP-ATKGYGYVQFKTRPSAEEAVQRMQG 290
Query: 177 SQIGGRTVKVNFPEVP 192
IG + V++++ + P
Sbjct: 291 QVIGQQAVRISWSKNP 306
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARALE----FTN----IYVKNLPVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SR FGFV FE E+ Q A+ MNG EV GR L A +
Sbjct: 210 LFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDR 166
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NLP + L ++F++ G + S +++ D + SR FGFV EEA++A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + + V R E +++ YQG +Y NL
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEMLKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
DS +K+Y GNL WG+ + L + F Q +L AKVI++R +GRSRGFGFVT+ +A+++ +
Sbjct: 11 DSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNN 70
Query: 273 ALDAMNGVEVEGRPLRLNMA 292
A+ ++GV+++GR +R+ +A
Sbjct: 71 AISNLDGVDLDGRQIRVTVA 90
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D A +LYVGNL + + +S+L +F+E G V A+++YDR + RSRGFGFVT GS +E
Sbjct: 11 DSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNN 70
Query: 170 AIRLFDGSQIGGRTVKVNFPE 190
AI DG + GR ++V E
Sbjct: 71 AISNLDGVDLDGRQIRVTVAE 91
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGP 202
+I D T SRG GFVTM S+ EA+ A+ DG + GR + V R
Sbjct: 9 QISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMT 68
Query: 203 KLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+SPHKIY GN+ W + Q LR+ F ++S +++ +R GR R +GF+
Sbjct: 69 HTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFL 128
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
+F +AE+L++AL ++ GR + + A+E
Sbjct: 129 SFASAEELEAAL-KLDNTHFHGRNILVRQAHE 159
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGN+ +S+ L E F++ GTV S ++ DR R R +GF++ S EE + A++L
Sbjct: 83 KIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKL 142
Query: 174 FDGSQIGGRTVKV 186
D + GR + V
Sbjct: 143 -DNTHFHGRNILV 154
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 190 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 249
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 250 KDEESVPLAIQL-TGQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 306
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 307 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 364
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 365 DLAGRPIRVGLGNDKFTP 382
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L + S L F + G V A+IV DRV+ RS+G G+V + E AI+L
Sbjct: 180 VFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVAAAIQLT 239
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWGLTSQGLR 233
G ++ G + E + + P N Q P H++Y GN+ + +T L+
Sbjct: 240 -GQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQ----IPFHRLYVGNIHFSITEGDLQ 294
Query: 234 DAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ P G L + + GRSRG+GFV F + AL+ MNG ++ GRP+R+ +
Sbjct: 295 NVFE--PFGELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALEKMNGFDLAGRPIRVGLG 352
Query: 293 NERAPP 298
N++ P
Sbjct: 353 NDKFTP 358
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD--RSRGFGFVTMGSVEEAKEAI 171
RLYVGN+ +S+T L VF G + E V + D RSRG+GFV +A+EA+
Sbjct: 278 RLYVGNIHFSITEGDLQNVFEPFGEL---EFVQLQKEDQGRSRGYGFVQFRDPHQAREAL 334
Query: 172 RLFDGSQIGGRTVKVNF 188
+G + GR ++V
Sbjct: 335 EKMNGFDLAGRPIRVGL 351
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARALE----FTN----IYVKNLPVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SR FGFV FE E+ Q A+ MNG EV GR L A +
Sbjct: 210 LFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDR 166
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NLP + L ++F++ G + S +++ D + SR FGFV EEA++A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + + V R E +++ YQG +Y NL
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEMLKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|225683698|gb|EEH21982.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 730
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL + F+++ + A +V D T +S+G+GFVT E+ A+ F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMG-PKLQNSYQGFVDSPHKIYAGNLGWG 226
+GS G+ +K+ E PR GG+ + PK + + + P K+ NL W
Sbjct: 110 NGSVFDGKKLKIEVAE-PRHRKVDEKGGKSVSTSKPKRERENKQALVQPPKLIIRNLPWS 168
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + G + VI ++ S GFGFV ++ + AL+A+NG EV+GR
Sbjct: 169 IAEPEQLEVLFRSFGKVKHAVIPKKGNKHS-GFGFVVLRGRKNAEKALEAVNGKEVDGRT 227
Query: 287 LRLNMANER 295
L ++ A E+
Sbjct: 228 LAVDWAAEK 236
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A+ +++ NLP++ T SL E F + G + A +V+D TDR RG FV E A +
Sbjct: 311 ASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKENANSCL 370
Query: 172 R 172
R
Sbjct: 371 R 371
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 194 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 253
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 254 KDEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 310
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 311 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 368
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 369 DLAGRPIRVGLGNDKFTP 386
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N M + E+ AEAG + S +++ D +S+GFGFV+ + EEA+EA+ +
Sbjct: 196 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTD-PEGKSKGFGFVSFETPEEAEEAVNVL 254
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-----MGPKLQ---NSYQGFVDSPHKIYAGNLGWG 226
+G +IGGR + + ERAA + K Q N +QG +Y NL
Sbjct: 255 NGKEIGGRRLWAG--RAKKRAERAAEVKAEIEKKRQERINRFQGV-----NLYIKNLDDP 307
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + LR+ F + SAKV+ + G S+GFGFV F + E+ A+ MNG + +P
Sbjct: 308 IDDERLREEFSPYGTISSAKVMKDD-KGNSKGFGFVCFSSPEEATKAVTEMNGRILISKP 366
Query: 287 LRLNMANER 295
L + +A R
Sbjct: 367 LYVALAQRR 375
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + SL + F+ G + S +I D + + +G+GFV + + A EAI
Sbjct: 103 IFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGN-PKGYGFVHFETEDAALEAIARV 161
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
DG + + V V R + K+ + F + +Y N G + + +++
Sbjct: 162 DGMLLNDKKVFVG-----RWMSKKERIEKMGTQPKKFTN----VYVKNFGDDMDDEQMKE 212
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
++S KV+ + G+S+GFGFV+FET E+ + A++ +NG E+ GR L A +
Sbjct: 213 ICAEAGKIVSLKVMTDP-EGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKK 271
Query: 295 RA 296
RA
Sbjct: 272 RA 273
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
AA+ A LYVG+L +T + L E F+ AG+V S + D VT RS G+ +V
Sbjct: 7 AANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGH 66
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A++A+ + I GR ++ + + P L+ S G I+ NL
Sbjct: 67 AEKALDTMNFDPIKGRPCRIMWQQ---------RDPSLRKSGVG------NIFIKNLDKS 111
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ ++ L D F +LS K I + G +G+GFV FET + A+ ++G+
Sbjct: 112 IDNKSLYDTFSAFGNILSCK-IAQDELGNPKGYGFVHFETEDAALEAIARVDGM 164
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ + ALD M
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTM 74
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRP R+ M +R P
Sbjct: 75 NFDPIKGRPCRI-MWQQRDP 93
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LY+ NL + L E F+ GT++SA+++ D + S+GFGFV S EEA +A
Sbjct: 295 QGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGN-SKGFGFVCFSSPEEATKA 353
Query: 171 IRLFDG 176
+ +G
Sbjct: 354 VTEMNG 359
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-AELGARALE----FTN----IYVKNLPVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SR FGFV FE E+ Q A+ MNG EV GR L A +
Sbjct: 210 LFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDR 166
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
E +YV NLP + L ++F++ G + S +++ D + SR FGFV EEA++A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKA 247
Query: 171 IRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYAGNLG 224
+ +G ++ GR + + V R E +++ YQG +Y NL
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGV-----NLYVKNLD 302
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG V
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 285 RPLRLNMANER 295
+PL + +A +
Sbjct: 361 KPLYVALAQRK 371
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEMLKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|366995805|ref|XP_003677666.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
gi|342303535|emb|CCC71315.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
Length = 435
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A ++VGNL Y T L + F+ G V A+I+ + RG G V + + +EAI
Sbjct: 104 ANSIFVGNLTYDCTPEDLRDYFSGIGEVVRADIITSK--GHHRGMGTVEFTNSRDVEEAI 161
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN---------------SYQGFVDSPH 216
R +D S R + V P R P + S Q + +
Sbjct: 162 RQYDSSYFMDRQIFVRQDNPPPDNGRNERTPSRRTTAPSSRQQDISSGAYSMQSNMKQGY 221
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
+I+ NL + + Q L+D F+ ++ A V +R GRSRGFG V F T +D++ A+D
Sbjct: 222 EIFVANLPYSINWQALKDMFKECGDVMRADVELDR-AGRSRGFGTVIFRTRDDMERAIDR 280
Query: 277 MNGVEVEGRPL 287
N EV+GR L
Sbjct: 281 YNRFEVDGRTL 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NLPYS+ +L ++F E G V A++ DR RSRGFG V + ++ + AI +
Sbjct: 223 IFVANLPYSINWQALKDMFKECGDVMRADVELDRAG-RSRGFGTVIFRTRDDMERAIDRY 281
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-------------------------- 208
+ ++ GRT+ V + + + QN+
Sbjct: 282 NRFEVDGRTLDVREGHSNNRNDDMNIQHQTQNAMTNDATSDATSNERSLPTQPSEPASNR 341
Query: 209 -----QGFVDSPHK---IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
+G V+ + IY NL L D F+ + +A++ ++R G + G
Sbjct: 342 TSTFTEGVVEGGERNTLIYCSNLPPSTARSDLYDLFESIGKVRNAELKYDR-NGETTGVA 400
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
V F + +D ++ +N G L ++ A
Sbjct: 401 IVEFISQDDADVCIERLNKYNYGGCDLEISYA 432
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 16/189 (8%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E L++G+L Y + + L F++ G + S +++ +++T + G+GF+ S A+
Sbjct: 20 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 79
Query: 170 AIRLFDGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++ ++G+Q+ G T ++N+ G++ GP H I+ G+L +
Sbjct: 80 TLQTYNGTQMPGTELTFRLNWASF-GSGQKVDAGPD------------HSIFVGDLAPDV 126
Query: 228 TSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ + AKV+ + TGRS+G+GFV F + A+ MNG+ RP
Sbjct: 127 TDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRP 186
Query: 287 LRLNMANER 295
+R++ A +
Sbjct: 187 MRISAATPK 195
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V D T RS+G+GFV E A+
Sbjct: 117 IFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAE 176
Query: 174 FDGSQIGGRTVKVN--FPEVPRGGERAAM--GP---KLQNSYQGFVDSPHK--------- 217
+G R ++++ P+ G ++ + GP + Q ++ P +
Sbjct: 177 MNGLYCSTRPMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVT 236
Query: 218 ---IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
I NL +T + L+ AF ++ K+ ++G+G+V F+T + A+
Sbjct: 237 CTTISIANLDPNVTEEELKKAFSQLGEIIYVKIP------ATKGYGYVQFKTRPSAEEAV 290
Query: 275 DAMNGVEVEGRPLRLNMA 292
M G + + +R++ +
Sbjct: 291 QKMQGQVIGQQAVRISWS 308
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 179 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 238
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 239 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 295
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 296 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 353
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 354 DLAGRPIRVGLGNDKFTP 371
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG L ++T + L E+F G VAS + D VT RS G+ +V + + + A+
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ S I GR ++ + + P L+ + QG I+ NL + ++ L
Sbjct: 104 QLNYSSIKGRACRIMWSQ---------RDPALRKTGQG------NIFIKNLDEQIDNKAL 148
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
D F +LS KV + + GRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 149 HDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGM 195
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + + +L + FA G V S ++ D RS+G+GFV + E A+ AI+
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAV 192
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V + + R ER + KL+ F + IY N +T +
Sbjct: 193 NGMLLNDKKVYVGY-HISRK-ERQS---KLEEMKAQFTN----IYVKNFDPEVTEEEFMA 243
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
FQ Q G +++ VI GRSRGFGFV FE ++ Q A++ ++ ++ +G+ L ++ A +
Sbjct: 244 LFQ-QFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKLFVSRAQK 302
Query: 295 RA 296
+A
Sbjct: 303 KA 304
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N +T +F + G+V SA I D RSRGFGFV +EA++A+
Sbjct: 227 IYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDD-EGRSRGFGFVNFEVHDEAQKAVEGL 285
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-QGFVDSPHK-----IYAGNLGWGLT 228
G+ + V+ R ++A +L+ SY Q ++ K +Y NL L
Sbjct: 286 HDLDFKGKKLFVS-----RAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLD 340
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
LR F+ + SAKV+ + G S+GFGFV F + ++ A+ MN + +PL
Sbjct: 341 DDRLRTEFEPFGSITSAKVMRDE-KGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 399
Query: 289 LNMANER 295
+++A R
Sbjct: 400 VSLAQRR 406
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E EQE + E + E+ K + LY+ NL + L F G++
Sbjct: 300 AQKKAEREQELRQSYEQAKMEKMSKF----QGVNLYIKNLEDDLDDDRLRTEFEPFGSIT 355
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
SA+++ D S+GFGFV S +EA +A+ + IG + + V+ +
Sbjct: 356 SAKVMRDE-KGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 404
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
++ A +YVG L +T LAE+F + G V + + DRVT +G+GFV S ++A
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI++ + ++ G+ V+VN +A+ S+Q +D ++ GNL +
Sbjct: 68 AIKILNMIKLFGKPVRVN---------KAS-------SHQKNLDVGANLFIGNLDPEIDE 111
Query: 230 QGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L D F +L + K++ + TG S+GF F+ + + E +AL+AMNG + RP+
Sbjct: 112 KLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPIT 171
Query: 289 LNMANER 295
++ A ++
Sbjct: 172 ISFAFKK 178
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQQAITTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E +G + F + IY NL + QGL+D
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERE-VELGARAME----FTN----IYVKNLHVDVDEQGLQD 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV F+ E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSRFGKMLSVKVMRDD-SGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + + SRGFGFV FET E Q A+ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAITTMNGMLLNDR 166
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL + L ++F+ G + S +++ D + SRGFGFV EE
Sbjct: 185 ARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDD-SGHSRGFGFVNFQKHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQNS----YQGFVDSPHKIYA 220
A++A+ +G ++ GR + V + V R E +L+ YQG +Y
Sbjct: 244 AQKAVMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGV-----NLYV 298
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG
Sbjct: 299 KNLDDSIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 281 EVEGRPLRLNMANER 295
+ +PL + +A +
Sbjct: 357 ILGTKPLYVALAQRK 371
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E+SID L + ST
Sbjct: 73 NFEVIKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFST 121
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 178 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 237
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 238 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 294
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 295 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 352
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 353 DLAGRPIRVGLGNDKFTP 370
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP++ + R ++V L + + L F + G V A+IV DRV+ RS+G G+V
Sbjct: 179 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 238
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
+ E AI+L G ++ G + E + R A P+ S H++Y G
Sbjct: 239 KNEESVPLAIQLT-GQKLLGIPIIAQLTEAEK--NRQARNPEANVSGNQNSIPFHRLYVG 295
Query: 222 NLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
N+ + +T L+ F+ P G L + + GRSRG+GFV F + AL+ MNG
Sbjct: 296 NIHFSITESDLQKVFE--PFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGF 353
Query: 281 EVEGRPLRLNMANERAPP 298
++ GRP+R+ + N++ P
Sbjct: 354 DLAGRPIRVGLGNDKFTP 371
>gi|426221705|ref|XP_004023200.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Ovis aries]
Length = 724
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 496 SGESKTLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAK 551
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 552 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 598
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 599 EETLKESFDGS---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 655
Query: 289 LNMANER 295
L+ A +
Sbjct: 656 LDWAKPK 662
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 393 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 447
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
+ + +A++ + G++I GR++ + + GE+ + +
Sbjct: 448 IEFKTEADAEKTLEEKQGTEIDGRSISLYYT-----GEKGQSQDHRGGKNSTWSGESKTL 502
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
NL + T + L++ F+ + + + G+S+G+ F+ F + ED + AL++ N
Sbjct: 503 VLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 558
Query: 279 GVEVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 559 KREIEGRAIRLELQGPRGSP 578
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 122 YSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGG 181
+S+ L + F G V A ++Y+R TDRSRG+G+V + A++AI+ G +I G
Sbjct: 17 WSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDG 76
Query: 182 RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQGLRDAFQ 237
R + + G + + F D+P + ++ GNL + + + F
Sbjct: 77 RPINCDMSTSKPAGN--------NDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFA 128
Query: 238 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++S ++ T + +GFG+V F ED + ALDA+ G ++ RP+RL+ ++ R
Sbjct: 129 KHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPR 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++GNL ++ ++ E+FA+ G V S I T++ +GFG+V ++E+AK+A+
Sbjct: 109 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 168
Query: 175 DGSQIGGRTVKVNF 188
G I R V+++F
Sbjct: 169 QGEYIDNRPVRLDF 182
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 33 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 90
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R A +G K + F + +Y N G + + L++
Sbjct: 91 NGMLLNDRKVFVGRFK-SRKEREAELGAKAKE----FTN----VYIKNFGEDMDDERLKE 141
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
F LS KV+ + +GRS+GFGFV+FE ED Q A+D MNG E+ GR +
Sbjct: 142 IFNKFGAFLSVKVMTDD-SGRSKGFGFVSFEKHEDAQKAVDEMNGKEINGRQV 193
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F + G S +++ D + RS+GFGFV+ E+
Sbjct: 117 AKAKEFTNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDD-SGRSKGFGFVSFEKHED 175
Query: 167 AKEAIRLFDGSQIGGRTVKV 186
A++A+ +G +I GR V V
Sbjct: 176 AQKAVDEMNGKEINGRQVYV 195
>gi|239606561|gb|EEQ83548.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ER-3]
Length = 744
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A +V D T +S+ +GFVT E+A +A+ F
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKSYGFVTFADHEDAAKALEEF 110
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMGP-KLQNSYQGFVDSPHKIYAGNLGWG 226
+GS G+ +K+ E PR GG+ + K + + P K+ NL W
Sbjct: 111 NGSVFDGKKLKIEVAE-PRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIRNLPWS 169
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ A G + VI +R T S GFGFV ++ + AL+A+NG E++GR
Sbjct: 170 IAEPDQLAALFRSFGKVKHAVIPKRGTQHS-GFGFVVLRGRKNAEKALEAVNGKEIDGRT 228
Query: 287 LRLNMANERA 296
L ++ A E++
Sbjct: 229 LAVDWAVEKS 238
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A+ +++ NLP+S T +L E F + G + A +V D TDR RG FV E+A +
Sbjct: 322 ASTIFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDAISCL 381
Query: 172 R 172
R
Sbjct: 382 R 382
>gi|210075933|ref|XP_503927.2| YALI0E14058p [Yarrowia lipolytica]
gi|199426916|emb|CAG79520.2| YALI0E14058p [Yarrowia lipolytica CLIB122]
Length = 417
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+L+VGNLPYS L ++F EAG + A+I+ RS+G G V + E+A AI
Sbjct: 205 GTQLFVGNLPYSTGWQDLKDLFREAGQIVRADIMTSH-DGRSKGSGIVLFETAEDAHRAI 263
Query: 172 RLFDGSQIGGRTVKVN---FPEVPRGGE-----RAAMGPKLQNSYQ----------GFVD 213
F+G Q+GGR ++V F PRGG R P QN + G D
Sbjct: 264 ERFNGHQMGGRAIEVREDRFAGPPRGGPPARVARTPFAPAPQNPPRVPSEFSDGAIGGGD 323
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
I+ GNL W Q L D F+ + A++ F G+ G G V FET + +
Sbjct: 324 PSDTIFVGNLPWSTADQDLYDLFETVGKVTKAEIQFLP-DGKKAGSGVVQFETPASAEIS 382
Query: 274 LDAMNGVEVEGRPLRLNMANERAP--PVLPAA 303
+ +G R L L+ P P PAA
Sbjct: 383 IAKFSGYNYGRRDLELSYVRRTEPQIPNAPAA 414
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+S + R+YVGNL Y + L + +AG V A+++ RS+G G V + EEA
Sbjct: 84 SSQQDRRVYVGNLAYEVKWHHLKDFMRQAGNVLFADVLL-MPNGRSKGCGIVEYSTREEA 142
Query: 168 KEAIRLFDGSQIGGRTVKVN--------------FPEVPRGGERAAMGPKLQNSYQGFVD 213
+ A+ ++ GR V V P R G R+ G S Q
Sbjct: 143 ENAVNTLTNQELMGRVVYVREDRESEPKFSQPNLGPPGARDGGRSERGGDFGGSRQSGGG 202
Query: 214 SPH-KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+P +++ GNL + Q L+D F+ + G + I + GRS+G G V FETAED
Sbjct: 203 APGTQLFVGNLPYSTGWQDLKDLFR-EAGQIVRADIMTSHDGRSKGSGIVLFETAEDAHR 261
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPPV-LPAAKETKT 308
A++ NG ++ GR + + PP P A+ +T
Sbjct: 262 AIERFNGHQMGGRAIEVREDRFAGPPRGGPPARVART 298
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSV 164
+ D + ++VGNLP+S L ++F G V AEI + + D + G G V +
Sbjct: 319 IGGGDPSDTIFVGNLPWSTADQDLYDLFETVGKVTKAEIQF--LPDGKKAGSGVVQFETP 376
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNF-----PEVP 192
A+ +I F G G R +++++ P++P
Sbjct: 377 ASAEISIAKFSGYNYGRRDLELSYVRRTEPQIP 409
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGNL + +T+ L F++ G V ++YD S+GFG+V VE A++A+ L
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSKGFGYVKFHDVETAEKAVALM 201
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--HKIYAGNLGWGLTSQGL 232
G GR + VNF V +L P +Y GN+ + +T + L
Sbjct: 202 HGQLFEGRHLAVNFARV-----------ELDKPMNHDPTKPPTRTLYIGNIPFEMTDRDL 250
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ ++ +V +R TGR+RGF F E + A ++ GRPLR++ +
Sbjct: 251 NELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTKTPYGRPLRIDYS 310
Query: 293 N 293
+
Sbjct: 311 H 311
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAED 269
G++ IY GNL + +T+ L++ F + +++++ Y G S+GFG+V F E
Sbjct: 135 GYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSKGFGYVKFHDVET 193
Query: 270 LQSALDAMNGVEVEGRPLRLNMA 292
+ A+ M+G EGR L +N A
Sbjct: 194 AEKAVALMHGQLFEGRHLAVNFA 216
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +++T S L +VF + G V S + D T RS G+G+V + ++A A+ +
Sbjct: 14 LYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 73
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + + +++ + ++ M I+ NL G+ + L D
Sbjct: 74 NFTPLNNKPIRIMYSHRDPSIRKSGMA---------------NIFIKNLDKGIDHKALHD 118
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
F +LS KV + +G+S+G+GFV F++ E Q+A+D +NG+ V +
Sbjct: 119 TFSSFGNILSCKVATDA-SGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDK 168
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +++ NL + +L + F+ G + S ++ D + +S+G+GFV S E A+ AI
Sbjct: 100 ANIFIKNLDKGIDHKALHDTFSSFGNILSCKVATD-ASGQSKGYGFVQFDSEEAAQNAID 158
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + + V V + + A K N ++ NL T + L
Sbjct: 159 KLNGMLVNDKQVYVGHFLRKQDRDGALYSIKFNN-----------VFVKNLAESTTDEEL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F + G +++ V+ G+S+ FGFV FE+A+D A++A+NG +++G + A
Sbjct: 208 KNIF-AEHGAITSAVVMRDADGKSKCFGFVNFESADDAAKAVEALNGKKIDGEEWYVGKA 266
Query: 293 NERA 296
+++
Sbjct: 267 QKKS 270
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S T L +FAE G + SA ++ D +S+ FGFV S ++A +A+
Sbjct: 193 VFVKNLAESTTDEELKNIFAEHGAITSAVVMRD-ADGKSKCFGFVNFESADDAAKAVEAL 251
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQG 231
+G +I G V + + ER + + + S + VD +Y NL + +
Sbjct: 252 NGKKIDGEEWYVG--KAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLDDSINDEK 309
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L++ F + S KV+ + +G SRG GFV F T E+ AL MNG + +PL + +
Sbjct: 310 LKELFSDFGAITSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKMLISKPLYVAL 368
Query: 292 ANER 295
A +
Sbjct: 369 AQRK 372
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P +Y G+L + +T L D F ++S +V + T RS G+G+V + +D AL
Sbjct: 11 PTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 70
Query: 275 DAMNGVEVEGRPLRLNMANERAPPV 299
D +N + +P+R+ M + R P +
Sbjct: 71 DVLNFTPLNNKPIRI-MYSHRDPSI 94
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E E + E+ + + LY+ NL S+ L E+F++ G + S +++
Sbjct: 267 QKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLDDSINDEKLKELFSDFGAITSCKVM 326
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D + SRG GFV + EEA A+ +G + + + V
Sbjct: 327 RDP-SGISRGSGFVAFSTPEEASRALAEMNGKMLISKPLYV 366
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
AS +A LYVG L ++T + L E+F G VAS + D VT RS G+ +V + +
Sbjct: 44 ASVPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADG 103
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ A+ + S I R ++ + + P L+ + QG I+ NL +
Sbjct: 104 ERALEQLNYSLIKNRPCRIMW---------SQRDPALRKTGQG------NIFIKNLDEAI 148
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + TGRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 149 DNKALHDTFAAFGTVLSCKVATDE-TGRSKGYGFVHYETAEAAENAIKAVNGM 200
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA GTV S ++ D T RS+G+GFV + E A+ AI+
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDE-TGRSKGYGFVHYETAEAAENAIKAV 197
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V + R ER + KL+ F + +Y NL +T +
Sbjct: 198 NGMLLNDKKVYVGH-HISRK-ERQS---KLEEMRAQFTN----LYVKNLDPEVTQDEFIE 248
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + G +++ VI G+S+GFGFV FET ++ Q A+D +N E++G+ L ++ A +
Sbjct: 249 LFK-KYGNVTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQK 307
Query: 295 RA 296
+A
Sbjct: 308 KA 309
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYV NL +T E+F + G V SA I D +S+GFGFV + +EA++A+
Sbjct: 232 LYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDE-EGKSKGFGFVNFETHDEAQKAVDEL 290
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-QGFVDSPHK-----IYAGNLGWGLT 228
+ ++ G+ + V+ R ++A +L+ SY Q ++ K +Y NL +
Sbjct: 291 NDFELKGKKLFVS-----RAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVD 345
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
LR F+ + S KV+ + G+S+GFGFV F + ++ A+ MN + +PL
Sbjct: 346 DDKLRAEFEPFGTITSCKVMRDE-KGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 404
Query: 289 LNMANER 295
+++A R
Sbjct: 405 VSLAQRR 411
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E EEE E+ K+ + + LY+ NL + L F GT+ S +++
Sbjct: 306 QKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVM 365
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D +S+GFGFV S +EA +A+ + IG + + V+
Sbjct: 366 RDE-KGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 407
>gi|380470517|emb|CCF47704.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 769
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 103 EPKVA-ASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
EPK A EA R L+V +LP + TS SL + F+E V A +V D+ T SRG+GFVT
Sbjct: 37 EPKAKKARTEANRSLFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYGFVT 96
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGER------AAMGPKLQNSYQGFVDS 214
+ E+A EA + + GR ++V+ E + AA G K Q Q ++
Sbjct: 97 LTDAEDAMEAKKKLNNMMWEGRRIRVDVAEARSRDSKESVVGAAAAGQK-QKRTQELEEA 155
Query: 215 --PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
P K+ NL W + + A G++ + G+ +GFGFVT ++ +
Sbjct: 156 RKPPKLIIRNLPWSIKTSAQLGALFRAYGIIKF-ADLPQNKGKLKGFGFVTLRGRKNAEK 214
Query: 273 ALDAMNGVEVEGRPLRLNMANERA 296
AL+ MNG E++GR + ++ A +++
Sbjct: 215 ALE-MNGKEIDGRTIAVDWAVDKS 237
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
++D + L++ NLP+++T L E F + G V A +V DR TDR G GFV + +A
Sbjct: 347 STDNTSTLFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATDRPAGTGFVCFVNEADA 406
Query: 168 KEAIR 172
K I+
Sbjct: 407 KACIK 411
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+SD L + LP SMT L +FA G + S ++V DRVT +S G+GF+ +A
Sbjct: 498 SSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHPRDA 557
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ A+ L +G Q +T+KV++ R A +Y L +
Sbjct: 558 ERAVCLLNGLQCPPKTIKVSYARPNSSSIRDA-----------------NLYINGLPKNM 600
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG--R 285
T + L F +++++++ ++ +G SRG GF+ F + + A+ A+NG + G
Sbjct: 601 TQKELEHLFSPYGHIITSRILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPCGILE 660
Query: 286 PLRLNMANER 295
PL + A+ +
Sbjct: 661 PLVVRFAHNQ 670
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 44/227 (19%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LY+ LP +MT L +F+ G + ++ I+ D+ + SRG GF+ EA+EAI+
Sbjct: 589 ANLYINGLPKNMTQKELEHLFSPYGHIITSRILTDKASGTSRGVGFIRFNMKSEAEEAIK 648
Query: 173 LFDGSQIGG--RTVKVNF--------PEVPRGG-ERAAMGP-KLQNSYQGFVDSPHKIYA 220
+G + G + V F P+ P ++ GP Q G ++P A
Sbjct: 649 ALNGQKPCGILEPLVVRFAHNQTQVTPQNPLCQLPHSSHGPLPPQPRRSGLNNTPIPTRA 708
Query: 221 GNLGWGLTSQGLRD----AFQGQP----------------------------GLLSAKVI 248
T++ RD F GQ + + K+I
Sbjct: 709 AQNLTPSTTENTRDLVGVTFPGQTVTGWCIFIYNLAPDSDENILWQLFGPFGAVSNVKII 768
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ T + + FGFVT + + A+ ++NG + GR L+++ +
Sbjct: 769 RDFNTNKCKRFGFVTMTSYNEAALAIASLNGYCLGGRVLQVSFKTNK 815
>gi|322711864|gb|EFZ03437.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 731
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 16/197 (8%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+ P+V +E L+V +LP ++T+ +LA+ F++ V A +V D+ T SRG+GFVT+
Sbjct: 35 KRPRV---EERRSLFVRSLPANVTNDTLADFFSQHFPVKHAVVVVDQKTKESRGYGFVTL 91
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS--PHKIY 219
++A A D ++ G+ ++++ E PR AA G +S P K+
Sbjct: 92 ADSDDALAAKTTLDKAEWEGKRIRIDIAE-PR-KRNAANSEDTVPKRPGREESQRPPKLI 149
Query: 220 AGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFE---RYTGRSRGFGFVTFETAEDLQSALD 275
NL W + TS+ L + F+ KV F + G+ RGFGFVT ++ + AL+
Sbjct: 150 VRNLPWSIKTSEQLSNLFRS-----YGKVKFSDLPQSKGKLRGFGFVTIRGKKNAEKALE 204
Query: 276 AMNGVEVEGRPLRLNMA 292
+NG E++GR L ++ A
Sbjct: 205 GVNGKEIDGRTLAVDWA 221
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D ++ +++ NLP++ T L F+ G V A +V D++T++ G GFV +AK
Sbjct: 328 TDNSSTVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKITEKPAGTGFVCFVKQSDAK 387
Query: 169 EAIR 172
I+
Sbjct: 388 SCIK 391
>gi|331284195|ref|NP_001193589.1| nucleolin [Bos taurus]
gi|296490214|tpg|DAA32327.1| TPA: nucleolin [Bos taurus]
Length = 720
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 492 SGESKTLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAK 547
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 548 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 594
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 595 EETLKESFDGS---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 651
Query: 289 LNMANER 295
L+ A +
Sbjct: 652 LDWAKPK 658
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 389 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 443
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
+ + +A++ + G++I GR++ + + GE+ + +
Sbjct: 444 IEFKTEADAEKTLEEKQGTEIDGRSISLYYT-----GEKGQSQDHRGGKNSTWSGESKTL 498
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
NL + T + L++ F+ + + + G+S+G+ F+ F + ED + AL++ N
Sbjct: 499 VLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 554
Query: 279 GVEVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 555 KREIEGRAIRLELQGPRGSP 574
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR-VTDRSRGFGFVTMGSVEEAKEAIR 172
LYVGNL +T L E+FA AG V SA+I+ DR +GFV + A +A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---DSPHK--IYAGNLGWGL 227
+G +I ++VN+ +YQG D+ H ++ G+L +
Sbjct: 83 TLNGRKIFDAEIRVNW------------------AYQGNQNKEDTQHHYHVFVGDLSPEV 124
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L AF L A+V+++ +G+SRG+GF++F D + A+ +MNG + R +
Sbjct: 125 NDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAI 184
Query: 288 RLNMANER 295
R+N AN++
Sbjct: 185 RVNWANQK 192
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGN+ +T L EVFA G V S +++ + +GFV A AI
Sbjct: 56 VYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILSL 111
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + G+ +KVN+ G+R S I+ G+L +T L +
Sbjct: 112 NGRHLFGQPIKVNWAYA--SGQRED------------TSSHFNIFVGDLSPEVTDAMLFN 157
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F P A+V++++ TGRSRGFGFV+F +D Q+A+D + G + R +R N A +
Sbjct: 158 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATK 217
Query: 295 RAPPVLPAAKETKTENSIDGSELLSSIS 322
A + ++ ++ +S EL S +S
Sbjct: 218 GA----TSGEDKQSSDSKSVVELTSGVS 241
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
EE + + E P ++ + R ++V L + + L F + G V A+IV DRV
Sbjct: 154 EERRPRSPKREGTPPLSEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 213
Query: 150 TDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
+ RS+G G+V + E AI+L G ++ G + E + R P+ S
Sbjct: 214 SGRSKGVGYVEFKNEESVPAAIQL-TGQRLLGIPIIAQLTEAEK--NRQVRNPEATTSNP 270
Query: 210 GFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETA 267
+ P H++Y GN+ + +T L++ F+ P G L + + GRSRG+GFV F
Sbjct: 271 NQI--PFHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKEEQGRSRGYGFVQFRDP 326
Query: 268 EDLQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL+ MNG ++ GRP+R+ + N++ P
Sbjct: 327 NQAREALEKMNGFDLAGRPIRVGLGNDKFTP 357
>gi|440913256|gb|ELR62731.1| Nucleolin, partial [Bos grunniens mutus]
Length = 714
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 486 SGESKTLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAK 541
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 542 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 588
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 589 EETLKESFDGS---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 645
Query: 289 LNMANER 295
L+ A +
Sbjct: 646 LDWAKPK 652
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 383 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 437
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
+ + +A++ + G++I GR++ + + GE+ + +
Sbjct: 438 IEFKTEADAEKTLEEKQGTEIDGRSISLYYT-----GEKGQSQDHRGGKNSTWSGESKTL 492
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
NL + T + L++ F+ + + + G+S+G+ F+ F + ED + AL++ N
Sbjct: 493 VLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 548
Query: 279 GVEVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 549 KREIEGRAIRLELQGPRGSP 568
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG L ++T + L E+F G VAS + D VT RS G+ +V + + + A+
Sbjct: 6 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 65
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ S I GR ++ + + P L+ + QG I+ NL + ++
Sbjct: 66 EQLNYSLIKGRACRIMW---------SQRDPALRKTGQG------NIFIKNLDEQIDNKA 110
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
L D F +LS KV + + GRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 111 LHDTFAAFGNVLSCKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGM 158
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + + +L + FA G V S ++ D RS+G+GFV + E A+ AI+
Sbjct: 97 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAV 155
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V + R ER + +++N + IY N+ +T +
Sbjct: 156 NGMLLNDKKVYVGH-HISRK-ERQSKIEEMKNQFT-------NIYVKNVDPEVTQEEFVQ 206
Query: 235 AFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F+ P G +++ V+ G+SRGFGFV F+T E+ +A++A++ +V+GR L + A
Sbjct: 207 LFE--PFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQ 264
Query: 294 ERA 296
++A
Sbjct: 265 KKA 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ +T ++F G + SA + D +SRGFGFV + EEA A+
Sbjct: 190 IYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDD-EGKSRGFGFVNFDTHEEAHAAVEAL 248
Query: 175 DGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
S + GR + V E+ R E+A M + + YQG +Y NL
Sbjct: 249 HDSDVKGRKLFVARAQKKAEREEELRRSYEQAKM--EKMSKYQGV-----NLYIKNLEDD 301
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + LR F+ + SAKV+ + G S+GFGFV F + ++ A+ MN + +P
Sbjct: 302 IDDERLRGEFEPFGNITSAKVMRDE-KGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 360
Query: 287 LRLNMANER 295
L +++A R
Sbjct: 361 LYVSLAQRR 369
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E EEE E+ K+ + + LY+ NL + L F G + SA+++
Sbjct: 264 QKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVM 323
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D S+GFGFV S +EA +A+ + IG + + V+
Sbjct: 324 RDE-KGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 365
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKILNMIKLYGKPIRVN---------KASQDKK-------SLDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + L D F +++ K++ + TG SRGFGFV++++ E A++AMN + R
Sbjct: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNR 182
Query: 286 PLRLNMANER 295
P+ ++ A ++
Sbjct: 183 PITVSYAYKK 192
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+GNL Y +T+ L +VF+ G VAS +IVYD SRGFG+V S+++A+ AI
Sbjct: 131 LYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDN-RGMSRGFGYVEFKSIDDAQTAIDNL 189
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGLR 233
D GR + V + +R PK + P K ++ GN+ + ++ + L
Sbjct: 190 DMQVFEGRNLVVQYHRAKSDSDR----PKREFPPANL---PSKTLFIGNMSFEMSDKDLN 242
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D F+ + +V +R TG+ RGF F A + ++ + GR LR++ +
Sbjct: 243 DLFRDIRNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKEILSAKTIYGRELRVDFS 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L++GN+ + M+ L ++F + V + DR T + RGF V A +A +
Sbjct: 227 LFIGNMSFEMSDKDLNDLFRDIRNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKEIL 286
Query: 175 DGSQIGGRTVKVNFP----EVPRGGERAAMGPK 203
I GR ++V+F E PRG R G +
Sbjct: 287 SAKTIYGRELRVDFSRSANENPRGNTRRDSGTR 319
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F + G S +++ D T +SRGFGFV+ E+
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKI 218
A +A+ +G+++ G+TV V + ER A + + + YQG +
Sbjct: 244 ANKAVEDMNGTELNGKTVFVG--RAQKKNERQAELKRKFEMLKQERISRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL + + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVGSKPLYVALAQRK 371
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+ FV + + A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL---RLNM 291
F LS KV+ + TG+SRGFGFV++E ED A++ MNG E+ G+ + R
Sbjct: 210 LFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQK 268
Query: 292 ANER 295
NER
Sbjct: 269 KNER 272
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG V S + D +T RS G+ +V +A+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + P L+ S G ++ NL + ++ L
Sbjct: 71 TMNFDVVKGKPIRIMWSQ---------RDPSLRKSGVG------NVFIKNLDKSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + S+G+ FV FET + A++ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDR 166
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F++ G S ++ D +S+GFGFV+ E+
Sbjct: 185 ARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDD-GGKSKGFGFVSFERHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERA--------AMGPKLQNSYQGFVDSPHKI 218
A++A+ +G ++ GR V V + GER M YQG +
Sbjct: 244 AQKAVDDMNGKELNGRQVYVG--RAQKKGERQNELKRKFEQMKQDRMTRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL GL + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVATKPLYVALAQRK 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGARAREFTN----VYIKNFGEDMDDEKLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS +V+ + G+S+GFGFV+FE ED Q A+D MNG E+ GR + + A +
Sbjct: 210 LFSKYGPALSIRVMTDD-GGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
Query: 295 R 295
+
Sbjct: 269 K 269
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S A LYVG+L +T + L E F+ AG + S + D +T RS G+ +V +
Sbjct: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I GR +++ + + P L+ S G I+ NL
Sbjct: 65 AERALDTMNFDVIKGRPLRIMW---------SQRDPSLRKSGVG------NIFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+GFV FET E + A++ MNG+ + R
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++GRPLR+ M ++R P
Sbjct: 73 NFDVIKGRPLRI-MWSQRDP 91
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGN+ ++T LAEVF AG +A +++ + +GFV A AI
Sbjct: 58 VYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAIMTL 113
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
G Q+ G+ +KVN+ NS + I+ G+L +T L
Sbjct: 114 HGRQLYGQALKVNW--------------AYANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F P A+V+++ TGRS+G+GFV+F +D QSA++ M G + R +R N A +
Sbjct: 160 CFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATK 219
Query: 295 RAPPVLPAAKETKTENSI 312
A K ++N++
Sbjct: 220 GAGGSSNEEKNNDSQNAV 237
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L F+ + + A +++D T RS+G+GFV+ ++A+ AI
Sbjct: 143 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 202
Query: 175 DGSQIGGRTVKVNFPEVPRGG----------ERAAM-------GPKLQNSYQGFVDSPH- 216
G +G R ++ N+ GG + A M G + N+ ++P
Sbjct: 203 TGKWLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSY 262
Query: 217 -KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+Y GNL +T L F L A VI E R +GFGF+ + T ++ A+
Sbjct: 263 TTVYVGNLPHDVTQAELHCQFHA----LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQ 318
Query: 276 AMNGVEVEGRPLRLNMANERAPP 298
NG V G+ ++ + ++ PP
Sbjct: 319 MANGRLVRGKNMKCSWGSKPTPP 341
>gi|407005316|gb|EKE21467.1| RNA-binding protein, partial [uncultured bacterium]
Length = 76
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +LYVGNLPY++ + L ++FA+AG V SA I+ D+ T RS+GFGFV M + EEA +AI
Sbjct: 2 AKKLYVGNLPYTLKDADLNQLFAQAGAVESAVIINDKATGRSKGFGFVEMSADEEATKAI 61
Query: 172 RLFDGSQIGGRTVKV 186
+FDG ++ GR + V
Sbjct: 62 EMFDGQELEGRKLTV 76
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y GNL + L L F + SA +I ++ TGRS+GFGFV E+ A++
Sbjct: 3 KKLYVGNLPYTLKDADLNQLFAQAGAVESAVIINDKATGRSKGFGFVEMSADEEATKAIE 62
Query: 276 AMNGVEVEGRPL 287
+G E+EGR L
Sbjct: 63 MFDGQELEGRKL 74
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGN+ ++T LAEVF AG +A +++ + +GFV A AI
Sbjct: 58 VYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAIMTL 113
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
G Q+ G+ +KVN+ NS + I+ G+L +T L
Sbjct: 114 HGRQLYGQALKVNW--------------AYANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F P A+V+++ TGRS+G+GFV+F +D QSA++ M G + R +R N A +
Sbjct: 160 CFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATK 219
Query: 295 RAPPVLPAAKETKTENSI 312
A K ++N++
Sbjct: 220 GAGGSSNEEKNNDSQNAV 237
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L F+ + + A +++D T RS+G+GFV+ ++A+ AI
Sbjct: 143 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 202
Query: 175 DGSQIGGRTVKVNFPEVPRGG----------ERAAM-------GPKLQNSYQGFVDSPH- 216
G +G R ++ N+ GG + A M G + N+ ++P
Sbjct: 203 TGKWLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSY 262
Query: 217 -KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+Y GNL +T L F L A VI E R +GFGF+ + T ++ A+
Sbjct: 263 TTVYVGNLPHDVTQAELHCQFHA----LGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQ 318
Query: 276 AMNGVEVEGRPLRLNMANERAPP 298
NG V G+ ++ + ++ PP
Sbjct: 319 MANGRLVRGKNMKCSWGSKPTPP 341
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 98 VEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
V++ E + + + +YV NL +T + + F+E G V + I+ D +SRGFG
Sbjct: 192 VKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDG-NGKSRGFG 250
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM---GPKLQNSYQGFVDS 214
FV S +EAK+A+ +G+ +G + + V + ER + ++ N G +
Sbjct: 251 FVNFESPDEAKKAVEALNGAMLGSKKLFVG--RAQKKAERQELLKHEKEMVNCNIG-KEK 307
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
+Y NL + L++ F + SAKV+ +G S+GFGFV F T+E+ Q AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVM-RHDSGLSKGFGFVCFSTSEEAQKAL 366
Query: 275 DAMNGVEVEGRPLRLNMANER 295
+NG + GR L + MA +
Sbjct: 367 TTLNGTLLHGRSLYIAMAQRK 387
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A L+V NL S+ S+SL ++F + G + S ++ + +S+ FGFV S + A A+
Sbjct: 117 ANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALN 174
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ + + G+ + V+ + + ER A+ K N +Y NLG LT
Sbjct: 175 ALNDTMLDGKKLFVS--KFVKKCERKEASEETKFTN-----------VYVKNLGEDLTED 221
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+RD F + G + VI + G+SRGFGFV FE+ ++ + A++A+NG + + L +
Sbjct: 222 IIRDKFS-EFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVG 280
Query: 291 MANERA 296
A ++A
Sbjct: 281 RAQKKA 286
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L ++ L +VF+ G + S + D ++ +S + +V +A +A+
Sbjct: 29 AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALA 88
Query: 173 LFDGSQIGGRTVKVNFPE---VPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
+ +++ G+ +++ + +PR A ++ NL + S
Sbjct: 89 CLNHTKLMGKPMRIMWSHRDPLPRKTGLA------------------NLFVKNLDPSINS 130
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
L+D F +LS KV E G+S+ FGFV F++ + +AL+A+N ++G+ L
Sbjct: 131 ASLQDIFCKFGNILSCKVAEE--NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKL 186
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 89 QEEEEEEEAVEEEEEPKVA--ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV- 145
Q++ E +E ++ E+E ++A+ LYV NL S+ L E F+ G + SA+++
Sbjct: 283 QKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMR 342
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
+D + S+GFGFV + EEA++A+ +G+ + GR++ +
Sbjct: 343 HD--SGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYI 381
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 216 HK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
HK +Y G+L ++ L D F G L+S ++ + +G+S + +V F D A
Sbjct: 27 HKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKA 86
Query: 274 LDAMNGVEVEGRPLRLNMANERAP 297
L +N ++ G+P+R+ M + R P
Sbjct: 87 LACLNHTKLMGKPMRI-MWSHRDP 109
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
EA ++V L +T+ L F + G V A IV DR++ RS+G G+V +++
Sbjct: 63 EARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRLSRRSKGIGYVEFKNIDLV 122
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH----KIYAGNL 223
+AI L G+ + G + + E ER +GP V PH ++Y G+L
Sbjct: 123 NKAIAL-SGTIVMGLPIMIQLTE----SERNKIGPSSSLHLPPGVSHPHAGSMQLYVGSL 177
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ LT +R F+ L + + TG+S+G+ F+ ++ ED + AL+ M G E+
Sbjct: 178 HFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQMEGFELA 237
Query: 284 GRPLRLNMANERA 296
GR LR+N +++
Sbjct: 238 GRQLRVNTVHDKG 250
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 77 VTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA 136
VT+ + ++ E + EE+ E E PKV S A LYVG L S++ + L ++F+
Sbjct: 4 VTDKTAEQLEQLKIEEQTAPTTTESETPKVETS--GASLYVGELDPSVSEALLYDIFSPI 61
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
G+V+S + D +T+ S G+ +V E ++AI + + I G+ ++ +
Sbjct: 62 GSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQLNYTLIKGKPCRIMW-------- 113
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+ P L+ G IY NL + ++ L + F +LS KV + G S
Sbjct: 114 -SQRDPSLRKKGSG------NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDD-NGVS 165
Query: 257 RGFGFVTFETAEDLQSALDAMNGV 280
RGFGFV FE D + A++A+NG+
Sbjct: 166 RGFGFVHFENESDARDAIEAVNGM 189
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +Y+ NL ++ + SL E F+ G + S ++ D SRGFGFV + +A++AI
Sbjct: 125 SGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDD-NGVSRGFGFVHFENESDARDAI 183
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + + V V + V + ++ KL+ F + IY N+ + +
Sbjct: 184 EAVNGMLMNDQEVYVAW-HVSKKDRQS----KLEEVKAKFTN----IYVKNIDLETSQEE 234
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
F + G +++ V+ + G+ RGFGF+ FE A+D +N + G+ L +
Sbjct: 235 FEQLF-SKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAARAVDELNESDFRGQTLYVGR 293
Query: 292 ANER 295
A ++
Sbjct: 294 AQKK 297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ + ++F++ G + SA + D + RGFGF+ A A+
Sbjct: 221 IYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDS-EGKLRGFGFINFEDHSTAARAVDEL 279
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG------NLGWGLT 228
+ S G+T+ V R ++ +L+ Y+ Y G NL +
Sbjct: 280 NESDFRGQTLYVG-----RAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSID 334
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+D F + S KV+ + G SRGFGFV F T E+ A+ N V G+PL
Sbjct: 335 DEKLKDEFAPFGTITSVKVMKDE-AGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLY 393
Query: 289 LNMANER 295
+ +A +
Sbjct: 394 VAIAQRK 400
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 102 EEPKVAASD----EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFG 157
EEP A ++ E +++VG L +++ + L G V SA + DR T +SRGFG
Sbjct: 164 EEPAAATTELAEGETNQVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTGKSRGFG 223
Query: 158 FVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK 217
+V + AK+A G Q+ GR ++++ P+G K +
Sbjct: 224 YVDFATAAAAKKAFEEGQGKQVDGRAIRIDL-STPKGDVSEDRAKKFNDQRSA---PSST 279
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ GNL + +T + +AF + ++ + +GR +GFG+V F E +A+DAM
Sbjct: 280 LFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAAIDAM 339
Query: 278 NGVEVEGRPLRLNMANER 295
G E+ GRPLRL+ + R
Sbjct: 340 TGQELAGRPLRLDFSTPR 357
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKILNMIKLYGKPIRVN---------KASQDKK-------SLDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLL--SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F G++ + K++ + TG SRGFGFV++E+ E A++AMN +
Sbjct: 123 VDEKLLYDTFSAF-GVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCN 181
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 182 RPITVSYAYKK 192
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG L S+T + L E+F++ G VAS + D VT RS G+ +V S + ++A+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKAL 113
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ + I GR ++ + + P L+ + QG ++ NL + ++
Sbjct: 114 EELNYTLIKGRPCRIMWSQ---------RDPALRKTGQG------NVFIKNLDVAIDNKA 158
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
L D F +LS KV + TG S+G+GFV +ET E Q A+ +NG+
Sbjct: 159 LHDTFAAFGNILSCKVAQDE-TGSSKGYGFVHYETDEAAQQAIKHVNGM 206
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G + S ++ D T S+G+GFV + E A++AI+
Sbjct: 145 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-TGSSKGYGFVHYETDEAAQQAIKHV 203
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V +P+ ++ K + F + +Y N+ +T R
Sbjct: 204 NGMLLNEKKVYVGH-HIPKKDRQS----KFEEMKANFTN----VYIKNIAPDVTDDQFRV 254
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ G +++ I G+SRGFGFV F T E +A++ +N + G+ L + A +
Sbjct: 255 LFEAH-GDVTSSSIARDPDGKSRGFGFVNFTTHEAASAAVEELNNKDFHGQELYVGRAQK 313
Query: 295 R 295
+
Sbjct: 314 K 314
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 214 SPH-----KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
+PH +Y G L +T L + F + S +V + T RS G+ +V + +
Sbjct: 48 APHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTP 107
Query: 269 DLQSALDAMNGVEVEGRPLRLNMANERAP 297
D + AL+ +N ++GRP R+ M ++R P
Sbjct: 108 DGEKALEELNYTLIKGRPCRI-MWSQRDP 135
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 24/223 (10%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
++ EEE A ++ + + A +A L+VGNL +++ + L F G ++ I+ +R
Sbjct: 261 RKAEEETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER 320
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
T RSRGFG+V + +A +A G++I GR + +++ A P ++
Sbjct: 321 DTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDY---------ATGRPANKDQQ 371
Query: 209 QGFVD-------------SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
GF D SP ++ GNL + + + F + +L ++ + +
Sbjct: 372 GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 431
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
GR +GFG+V + + ++ ++A + + G ++ GRP+RL+ + RA
Sbjct: 432 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPRA 474
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 24/223 (10%)
Query: 89 QEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
++ EEE A ++ + + A +A L+VGNL +++ + L F G ++ I+ +R
Sbjct: 264 RKAEEETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER 323
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
T RSRGFG+V + +A +A G++I GR + +++ A P ++
Sbjct: 324 DTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDY---------ATGRPANKDQQ 374
Query: 209 QGFVD-------------SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
GF D SP ++ GNL + + + F + +L ++ + +
Sbjct: 375 GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 434
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERA 296
GR +GFG+V + + ++ ++A + + G ++ GRP+RL+ + RA
Sbjct: 435 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPRA 477
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T S L E F++AG V S + D T RS G+G+V + ++A A+
Sbjct: 41 LYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 100
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + GR ++V + + P L+ S G I+ NL + + L +
Sbjct: 101 NFMALNGRAIRVMY---------SVRDPSLRKSGVG------NIFIKNLDKSIDHKALHE 145
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F +LS KV + +G+S+G+GFV ++T E Q A+D +NG+
Sbjct: 146 TFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQRAIDKLNGM 190
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ +L E F+ G + S ++ D + +S+G+GFV + E A+ AI
Sbjct: 129 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQRAIDKL 187
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGP---KLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + + V V GP KLQ G +Y NL L+ +
Sbjct: 188 NGMLLNDKQVYV--------------GPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEE 233
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L F G+ G+ ++ VI G+S+GFGFV FE ++D A+DA+NG
Sbjct: 234 LNKVF-GEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNG 280
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL S++ L +VF E G S I+ D +S+GFGFV + ++A A+
Sbjct: 220 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG-EGKSKGFGFVNFENSDDAARAVDAL 278
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQG 231
+G + V + + ER + K + S + D +Y NL +T
Sbjct: 279 NGKTFDDKEWFVG--KAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDK 336
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
LR+ F + S KV+ + TG SRG GFV F T E+ A+ MNG + +PL + +
Sbjct: 337 LREHFAPFGTITSCKVMRDP-TGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVAL 395
Query: 292 ANER 295
A +
Sbjct: 396 AQRK 399
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+ +++ E E E ++ E+ A+D + + LYV NL S+T L E FA GT+ S +
Sbjct: 292 KAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCK 351
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQI 179
++ D T SRG GFV + EEA AI +G I
Sbjct: 352 VMRDP-TGVSRGSGFVAFSTPEEASRAITEMNGKMI 386
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L +AF ++S +V + T RS G+G+V + T +D AL+ +
Sbjct: 41 LYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 100
Query: 278 NGVEVEGRPLRLNMANERAP 297
N + + GR +R+ M + R P
Sbjct: 101 NFMALNGRAIRV-MYSVRDP 119
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 97 AVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGF 156
++E+E P+ LYVGNL +T + ++F G S +++ + + +
Sbjct: 106 SMEDESRPRT--------LYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDP--Y 155
Query: 157 GFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH 216
FV A A+ +G +I + VKVN+ P G ++ + H
Sbjct: 156 CFVEFYDHNHASAALTAMNGRKIMHKEVKVNWATTPSGNKKD-------------TSNHH 202
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
++ G+L + + L+ AF + A+V+ + T +SRG+GFV+F D ++A+ A
Sbjct: 203 HVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGA 262
Query: 277 MNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDGSELLSSIS 322
M+G + GR +R N A + PP P + E + + S D E+L S
Sbjct: 263 MSGQWLGGRAIRTNWATRKPPP--PKSNEGQKQLSYD--EVLCQAS 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L + ++ L FA G ++ A +V D T +SRG+GFV+ + +A+ AI
Sbjct: 203 HVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGA 262
Query: 174 FDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVD--SPHK--IYAGNLGW 225
G +GGR ++ N+ P P+ E G K Q SY + SP +Y G +
Sbjct: 263 MSGQWLGGRAIRTNWATRKPPPPKSNE----GQK-QLSYDEVLCQASPTNTTVYCGGITK 317
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
GLT +R+ F + +V E+ G+ F+ F + E A+ +NG ++EG+
Sbjct: 318 GLTEDLMRNTFSNFGPIQEIRVFPEK------GYSFIRFFSHEVAAMAIVTVNGTQIEGQ 371
Query: 286 PLRLNMANERAPPV 299
++ + E + P+
Sbjct: 372 AVKCSWGKESSDPM 385
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L ++T S L ++F +AG V S + D T RS G+G+V + ++A A+
Sbjct: 18 ASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 77
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
L + + + G+ +++ + + P ++ S I+ NL + ++ L
Sbjct: 78 LLNFTPLNGKPIRIMY---------SHRDPSIRKS------GTANIFIKNLDKSIDNKAL 122
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS K+ + +G+S+G+GFV F+ E Q+A+D +NG+ + +
Sbjct: 123 HDTFSAFGNILSCKIATDP-SGQSKGYGFVQFDNEESAQNAIDKLNGMLINDK 174
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A +++ NL S+ + +L + F+ G + S +I D + +S+G+GFV + E A+ AI
Sbjct: 106 ANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDP-SGQSKGYGFVQFDNEESAQNAID 164
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGER--AAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+G I + V V + R ER A K N +Y NL T +
Sbjct: 165 KLNGMLINDKQVYVG--QFLRKQERETALNKTKFNN-----------VYVKNLSESTTEE 211
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L++ F G+ G++++ V+ G+S+ FGFV FE A+D A++A+NG
Sbjct: 212 DLKNIF-GEFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNG 259
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL S T L +F E G + S ++ D +S+ FGFV + ++A EA+
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDG-DGKSKCFGFVNFENADDAAEAVEAL 257
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQGL 232
+G + + V + E G + + S + VD +Y NL + L
Sbjct: 258 NGKKFDEKEWYVGKAQKKYERELELKG-RFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKL 316
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F + S KV+ + +G SRG GFV F T+E+ AL MNG V +PL + +A
Sbjct: 317 KELFSEFGTITSCKVMRDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALA 375
Query: 293 NER 295
+
Sbjct: 376 QRK 378
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L D F +LS +V + T RS G+G+V + +D ALD +
Sbjct: 20 LYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDLL 79
Query: 278 NGVEVEGRPLRLNMANERAPPV 299
N + G+P+R+ M + R P +
Sbjct: 80 NFTPLNGKPIRI-MYSHRDPSI 100
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E E + E+ +V + LY+ NL S+ L E+F+E GT+ S +++
Sbjct: 273 QKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVM 332
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D + SRG GFV + EEA A+ +G + + + V
Sbjct: 333 RDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYV 372
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 77 VTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA 136
+TE + ++ E ++++E EE + V+AS LYVG+L S++ + L ++F+
Sbjct: 4 ITEKTAEQLENLSLQDKQEGTNEENQSETVSAS-----LYVGDLDPSVSEAHLYDIFSPI 58
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
G V+S + D +T S G+ +V + AK AI + + I G+ ++ +
Sbjct: 59 GAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMW-------- 110
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
+ P L+ G I+ NL + ++ L D F +LS+KV + TG+S
Sbjct: 111 -SQRDPSLRKKGAG------NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE-TGKS 162
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+GFG+V FE E A+DA+NG+ + G+ +
Sbjct: 163 KGFGYVHFEEDESASEAIDALNGMLLNGQEI 193
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +++ NL + + +L + F+ G + S+++ D T +S+GFG+V E A EAI
Sbjct: 122 AGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE-TGKSKGFGYVHFEEDESASEAI 180
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + G+ + V P + + ER + K + F + +Y N+ T +
Sbjct: 181 DALNGMLLNGQEIYVG-PHLSKK-ERES---KFEEMKANFTN----VYIKNINTETTDKE 231
Query: 232 LRDAFQGQPGLLSAK------VIFERY-TGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ L AK V+ ER G ++GFGFV F ED ++ +N E +G
Sbjct: 232 FEE--------LVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKG 283
Query: 285 RPLRLNMANER 295
+PL +N A ++
Sbjct: 284 QPLYVNRAQKK 294
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTD-RSRGFGFVTMGSVEEAKEAIRL 173
+Y+ N+ T E+ A+ G S +V +R + ++GFGFV + E+A + +
Sbjct: 218 VYIKNINTETTDKEFEELVAKFGKTDS--VVLERTPEGENKGFGFVNFVNHEDAVKCVEE 275
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG------NLGWGL 227
+ ++ G+ + VN R ++ +L+ Y+ Y G NL +
Sbjct: 276 LNNTEFKGQPLYVN-----RAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSI 330
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+ L + F + SAKV+ G+S+GFGFV F T E+ A+ N V G+PL
Sbjct: 331 DDKKLEEEFAPYGTITSAKVMTTE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 389
Query: 288 RLNMANER 295
+ +A +
Sbjct: 390 YVAIAQRK 397
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
++ A +YVG L +T LAE+F + G V + + DRVT +G+GFV S ++A
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI++ + ++ G+ V+VN +A+ S+Q +D ++ GNL +
Sbjct: 68 AIKILNMIKLFGKPVRVN---------KAS-------SHQKNLDVGANLFIGNLDPEIDE 111
Query: 230 QGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L D F +L + K++ + TG S+GF F+ + + E +AL+AMNG + RP+
Sbjct: 112 KLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPIT 171
Query: 289 LNMANER 295
++ A ++
Sbjct: 172 ISFAFKK 178
>gi|226293059|gb|EEH48479.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 691
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL + F+++ + A +V D T +S+G+GFVT E+ A+ F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 175 DGSQIGGRTVKVNFPEVPR-------GGERAAMG-PKLQNSYQGFVDSPHKIYAGNLGWG 226
+GS G+ +K+ E PR GG+ + PK + + + P K+ NL W
Sbjct: 110 NGSVFDGKKLKIEVAE-PRHRKVDEKGGKSVSTSKPKRERENKQALVQPPKLIIRNLPWS 168
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + G + VI ++ S GFGFV ++ + AL+A+NG EV+GR
Sbjct: 169 IAEPEQLEVLFRSFGKVKYAVIPKKGNKHS-GFGFVVLRGRKNAEKALEAVNGKEVDGRT 227
Query: 287 LRLNMANER 295
L ++ A E+
Sbjct: 228 LAVDWAAEK 236
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 94 EEEAVEEEEEPKVAASDE----AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV 149
++ E+E+ KV A E A+ +++ NLP++ T SL E F + G + A +V+D
Sbjct: 250 KDNGTEKEDNKKVHAEVEDDRNASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPE 309
Query: 150 TDRSRGFGFVTMGSVEEAKEAIR 172
TDR RG FV + A +R
Sbjct: 310 TDRPRGTAFVCFWDKKNANSCLR 332
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V S E+
Sbjct: 42 AHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDG 101
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++A+ + + I G+ ++ + + P L+ + QG ++ NL +
Sbjct: 102 EKALEELNYTVIKGKPCRIMW---------SQRDPALRKTGQG------NVFIKNLDHAI 146
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + + G S+G+GFV +ETAE +A+ +NG+
Sbjct: 147 DNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETAEAANNAIKHVNGM 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL +++ + +L + FA G + S ++ D + S+G+GFV + E A AI+
Sbjct: 137 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETAEAANNAIKHV 195
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V +P+ ER + K + F + IY N+ +T RD
Sbjct: 196 NGMLLNEKKVFVGH-HIPKK-ERMS---KFEEMKANFTN----IYVKNIDLDVTDDEFRD 246
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + SA + + G+SRGFGFV + E A++ +N E G+ L + A +
Sbjct: 247 LFEKHGDITSASIARDD-QGKSRGFGFVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQK 305
Query: 295 R 295
+
Sbjct: 306 K 306
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G L +T L + F + S +V + T RS G+ +V + ++ED + AL+ +
Sbjct: 49 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEEL 108
Query: 278 NGVEVEGRPLRLNMANERAP 297
N ++G+P R+ M ++R P
Sbjct: 109 NYTVIKGKPCRI-MWSQRDP 127
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 250 ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
++ G+S+GFGFV F ++ A+ MN +EG+PL + +A +
Sbjct: 420 KKILGKSKGFGFVCFSNPDEATKAVTEMNQKMLEGKPLYVALAQRK 465
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F + G S +++ D T +SRGFGFV+ E+
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKI 218
A +A+ +G+++ G+TV V + ER A + + + YQG +
Sbjct: 244 ANKAVEDMNGTELNGKTVFVG--RAQKKNERQAELKRKFEMLKQERISRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL + + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVGSKPLYVALAQRK 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+ FV + + A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGAKAKEFTN----VYIKNFGDDMDDERLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL---RLNM 291
F LS KV+ + TG+SRGFGFV++E ED A++ MNG E+ G+ + R
Sbjct: 210 LFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQK 268
Query: 292 ANER 295
NER
Sbjct: 269 KNER 272
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG V S + D +T RS G+ +V +A+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + P L+ S G ++ NL + ++ L
Sbjct: 71 TMNFDVVKGKPIRIMWSQ---------RDPSLRKSGVG------NVFIKNLDKSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + S+G+ FV FET + A++ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDR 166
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++S++ +++G+L M S L F++AG V S +I+ ++ T +S +GFV +
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ ++G+ + + ++N+ G +RA G S I+ G+L
Sbjct: 138 AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETG------------SDFSIFVGDLA 185
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T LRD F + P L AKV+ + TG S+G+GFV F + A+ MNGV
Sbjct: 186 SDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCS 245
Query: 284 GRPLRLNMANERAPPVLPAAKETKTENSI 312
R +R+ + A P P+A E + ++
Sbjct: 246 SRAMRIGV----ATPKKPSAHEQYSSQAV 270
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F + G V S +I +G GFV A+EAI+
Sbjct: 297 IFVGGLDSEVTDEELRQSFNQFGEVVSVKI------PAGKGCGFVQFSDRSSAQEAIQKL 350
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
G+ IG + V++++ P + R G + Y G
Sbjct: 351 SGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNG 387
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N +L ++FA+ G + S E++ V +S+GFGFV + EEA+ A++
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ--------NSYQGFVDSPHKIYAGNLGWG 226
S I G +K++ + ER A K YQG +Y NL
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-----NLYVKNLDET 327
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ GL+ F+ + SAKV+ + GRS+GFGFV FE E+ SA+ MN V +P
Sbjct: 328 VDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 387 LYVAIAQRK 395
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ +S A LYVG+L + S L E F+ AG V S + D T S G+ +V
Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQP 83
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A+ A+ + + G+ +++ + + R+ G I+ NL
Sbjct: 84 ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG---------------NIFIKNLD 128
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ ++ + D F +LS KV + G S+G+GFV FET E Q+A+ +NG+ + G
Sbjct: 129 KVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAG 187
Query: 285 RPLRLNMANERA 296
+ + + RA
Sbjct: 188 KKVFVGKFQPRA 199
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L + L + F +LS +V + T S G+ +V F+ D + A+D M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 278 NGVEVEGRPLRLNMANERAP 297
N + G+P+R+ M ++R P
Sbjct: 94 NFEALHGKPMRI-MWSQRDP 112
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G ++ V A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYMEFVDVSSVPLA 210
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 211 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 264
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 265 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324
Query: 291 MANER 295
ER
Sbjct: 325 HVTER 329
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L ++ + L E F+ G V ++ T R +G ++ E A
Sbjct: 138 DARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFKDPESVPLA 197
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ L +G ++ G + V P E+ M + N Q P K+Y G+L + +T +
Sbjct: 198 MGL-NGQKLLGVPIVVQ----PTQAEKNRMANSMPNMVQRTHYGPMKLYVGSLHYNITEE 252
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + +++ + TGRS+G+GF+T+ AED + AL+ +NG E+ GRP+++
Sbjct: 253 MLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHLNGFEIAGRPMKVG 312
Query: 291 MANE 294
E
Sbjct: 313 HVTE 316
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 134 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 193
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 194 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 247
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 248 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 307
Query: 291 MANER 295
ER
Sbjct: 308 HVTER 312
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T S L E F +AG V S + D T RS G+G+V + ++A A+
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + GR ++V + + P L+ S G I+ NL + + L +
Sbjct: 107 NFMALNGRAIRVMY---------SVRDPSLRKSGVG------NIFIKNLDKSIDHKALHE 151
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F +LS KV + +G+S+G+GFV ++T E Q A+D +NG+
Sbjct: 152 TFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQGAIDKLNGM 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ +L E F+ G + S ++ D + +S+G+GFV + E A+ AI
Sbjct: 135 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQGAIDKL 193
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGP---KLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + + V V GP KLQ G +Y NL L+ +
Sbjct: 194 NGMLLNDKQVYV--------------GPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEE 239
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L F G+ G+ ++ VI G+S+GFGFV FE ++D A+DA+NG
Sbjct: 240 LNKVF-GEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNG 286
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL S++ L +VF E G S I+ D +S+GFGFV + ++A A+
Sbjct: 226 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG-EGKSKGFGFVNFENSDDAARAVDAL 284
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQG 231
+G + V + + ER + K + S + D +Y NL +T
Sbjct: 285 NGKTFDDKEWFVG--KAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDK 342
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
LR+ F + S KV+ + +G SRG GFV F T E+ A+ MNG + +PL + +
Sbjct: 343 LREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVAL 401
Query: 292 ANER 295
A +
Sbjct: 402 AQRK 405
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAE 143
+ +++ E E E ++ E+ A+D + + LYV NL S+T L E FA GT+ S +
Sbjct: 298 KAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCK 357
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQI 179
++ D + SRG GFV + EEA AI +G I
Sbjct: 358 VMRDP-SGVSRGSGFVAFSTPEEATRAITEMNGKMI 392
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L +AF ++S +V + T RS G+G+V + T +D AL+ +
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 278 NGVEVEGRPLRLNMANERAP 297
N + + GR +R+ M + R P
Sbjct: 107 NFMALNGRAIRV-MYSVRDP 125
>gi|448521353|ref|XP_003868484.1| Pub1 protein [Candida orthopsilosis Co 90-125]
gi|380352824|emb|CCG25580.1| Pub1 protein [Candida orthopsilosis]
Length = 426
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 83 DEPETEQEEEEEEEAVEEEEEPKV--AASDEAAR------LYVGNLPYSMTSSSLAEVFA 134
+E E + +E+ +E V+EE V A++ E R LYVGNLP S + ++++F+
Sbjct: 21 NEQENKMTQEDVKEDVKEESTTPVTPASATEGGRETSNKILYVGNLPKSASEEQISKLFS 80
Query: 135 EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG 194
+ + S +++ D+ + F+ ++A A+ +G + +KVN+
Sbjct: 81 VSKPIKSIKLLNDK-NKLGFNYAFIEFDENQDADMALSTLNGKLLNNCEIKVNW-----A 134
Query: 195 GERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTG 254
+ A + S D + ++ G+L + + L+ AF A V+++ T
Sbjct: 135 YQSATIA-----SNSTPEDPTYNVFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTS 189
Query: 255 RSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
RSRG+GFVTF ED + AL MNG + GR +R N A
Sbjct: 190 RSRGYGFVTFGKQEDAELALQTMNGEWLGGRAIRCNWA 227
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L V NL YS T SL EVF +A + I + R++GF FV S+E+AKEA+
Sbjct: 467 LVVNNLSYSATEDSLREVFEKATS-----IRIPQNQGRAKGFAFVEFSSMEDAKEAMDSC 521
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ +++ GR++++ F + G S Q ++ L T + L++
Sbjct: 522 NNTEVEGRSIRLEFSQG-----GGPQGGGRGGSVQS-----KTLFVRGLSEDTTEETLKE 571
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
AF G ++A+++ +R TG S+GFGFV F ++ED ++A +AM E++G + L+ A
Sbjct: 572 AFDGS---INARIVTDRDTGASKGFGFVDFSSSEDAKAAREAMEDGEIDGNKVTLDFA 626
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS-RGFGFVTMGSVEEAKEAIRL 173
L+V N+PYS ++ L E+F A +I D S +G +V + EA +A+
Sbjct: 377 LFVKNIPYSTSAEELQEIFENA-----KDIRIPTGNDGSNKGIAYVEFSTEAEANKALEE 431
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGFVDSPHKIYAGNLGWGLTSQG 231
G++I GR++ V+F G K QNS +G + NL + T
Sbjct: 432 KQGAEIEGRSLFVDF-----------TGEKSQNSGGRRGPAGDSKVLVVNNLSYSATEDS 480
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
LR+ F+ + + + GR++GF FV F + ED + A+D+ N EVEGR +RL
Sbjct: 481 LREVFE-----KATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRL 533
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V L T +L E F G++ +A IV DR T S+GFGFV S E+AK A
Sbjct: 555 LFVRGLSEDTTEETLKEAFD--GSI-NARIVTDRDTGASKGFGFVDFSSSEDAKAAREAM 611
Query: 175 DGSQIGGRTVKVNFPEVPRG 194
+ +I G V ++F + P+G
Sbjct: 612 EDGEIDGNKVTLDFAK-PKG 630
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%), Gaps = 19/191 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL + L E+F +AG V + + DRVT++ +G+GFV S E+
Sbjct: 19 AERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKVLNMIKLYGKPIRVN---------KASQDKKS-------LDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLL--SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F G++ + K++ + TG SRGFGF+++++ E SA++AMNG +
Sbjct: 123 VDEKLLYDTFSAF-GVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCN 181
Query: 285 RPLRLNMANER 295
R + ++ A ++
Sbjct: 182 RQITVSYAYKK 192
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S+ S +L + F+ G + S ++V D + S+G+GFV + EEA+ AI
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKM 158
Query: 175 DGSQIGGRTVKV-NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G + R V V F R +A +G + + F + +Y NLG + + L+
Sbjct: 159 NGMFLNDRKVFVGRFKS--RRDRQAELGARAKE----FTN----VYIKNLGEDMDDERLQ 208
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
D F LS KV+ + +G+S+GFGFV+FE ED + A+D MNG ++ G+ + + A
Sbjct: 209 DLFSRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQ 267
Query: 294 ER 295
++
Sbjct: 268 KK 269
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + DR T RS G+ V +E+A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ V++ + + P L+ S G I+ NL + S+ L
Sbjct: 71 TMNFDVIKGKPVRIMWSQ---------RDPSLRKSGVG------NIFVKNLDRSIDSKTL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
D F +LS KV+ + S+G+GFV FET E+ + A++ MNG+ + R +
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKV 168
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ NL M L ++F+ G S +++ D + +S+GFGFV+ E+
Sbjct: 185 ARAKEFTNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDE-SGKSKGFGFVSFERHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY-QGFVDSPH--------- 216
A++A+ +G + G+ + V R ++ +L++ + Q D P
Sbjct: 244 ARKAVDEMNGKDLNGKQIYVG-----RAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRS 298
Query: 217 ------KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
+Y NL G+ + LR F + SAKV E GRS+GFGFV F + E+
Sbjct: 299 VRCQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTME--GGRSKGFGFVCFSSPEEA 356
Query: 271 QSALDAMNGVEVEGRPLRLNMANER 295
A+ MNG V +PL + +A +
Sbjct: 357 TKAVTEMNGRIVATKPLYVALAQRK 381
>gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA_c [Homo sapiens]
gi|193785526|dbj|BAG50892.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 308 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 363
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 364 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 410
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 411 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 467
Query: 289 LNMA 292
L+ A
Sbjct: 468 LDWA 471
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 217 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 271
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 272 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 320
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 321 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 372
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 373 EIEGRAIRLELQGPRGSP 390
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 100 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 159
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 160 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 210
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 211 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 249
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 250 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 293
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ G L W L++AF + A+VI +R +GRSRGFGFV+F +D +SA+DA
Sbjct: 38 KLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDA 97
Query: 277 MNGVEVEGRPLRLNMANERAP 297
M+G E+EGR +R+N ANER P
Sbjct: 98 MDGKELEGRSIRVNFANERPP 118
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
AA + +L+VG L ++ SL E F G V A ++ DR + RSRGFGFV+ + ++
Sbjct: 31 AARLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDD 90
Query: 167 AKEAIRLFDGSQIGGRTVKVNF 188
AK A+ DG ++ GR+++VNF
Sbjct: 91 AKSAMDAMDGKELEGRSIRVNF 112
>gi|345790650|ref|XP_850477.2| PREDICTED: nucleolin isoform 1 [Canis lupus familiaris]
Length = 715
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 487 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 542
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 543 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 589
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 590 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 646
Query: 289 LNMANER 295
L+ A +
Sbjct: 647 LDWAKPK 653
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 384 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----VEIRLVSKDGKSKGIAY 438
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP--- 215
+ + +A++ G++I GR++ + + GE+ Y+G +S
Sbjct: 439 IEFKTEADAEKTFEEKQGTEIDGRSISLYYT-----GEKGQ-----SQDYRGGKNSTWSG 488
Query: 216 --HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAED 269
+ NL + T + L++ F+ K F + G+S+G+ F+ F + ED
Sbjct: 489 ESKTLVLSNLSYSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFED 540
Query: 270 LQSALDAMNGVEVEGRPLRLNMANERAPP 298
+ AL++ N E+EGR +RL + R P
Sbjct: 541 AKEALNSCNKREIEGRAIRLELQGPRGSP 569
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 55/220 (25%)
Query: 105 KVAASD------------EAAR-------------LYVGNLPYSMTS----SSLAEVFAE 135
K A EA + L+VGNL +S ++ + ++++FA+
Sbjct: 279 KEAPGKRKKEMAKQKAAPEAKKQKVEATEPTTSFNLFVGNLNFSKSAPELKTGISDLFAK 338
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D SR FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 339 NDLA-----VVDVRIGVSRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKG- 388
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
++S + + A NL + +T L++ F+ + ++ G+
Sbjct: 389 ---------KDSKKD--RDARTLLAKNLPYKVTQDELKEVFED-----AVEIRLVSKDGK 432
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
S+G ++ F+T D + + G E++GR + L E+
Sbjct: 433 SKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 472
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
D +A LYVG L S+ +SL E+F+ G V+S + D VT +S G+ +V +E+ ++
Sbjct: 47 DTSASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEK 106
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTS 229
AI + S I GR ++ + + P L+ + +G I+ NL + +
Sbjct: 107 AIDDLNYSLIDGRPCRIMW---------SQRDPSLRRNGEG------NIFIKNLHPAIDN 151
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ L D F +LS KV + G S+ FGFV +ETAE ++A++ +NG+ + R
Sbjct: 152 KALHDTFSAFGKILSCKVATDE-QGNSKCFGFVHYETAEAARAAIENVNGMLLNDR 206
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ + + +F G + S + D +S+GFGFV S E A +A+
Sbjct: 233 VYVKNIDLGFSEEEMRNLFEPYGKITSLHLEKD-AEGKSKGFGFVNFESHEAAVKAVEEL 291
Query: 175 DGSQIGGRTVKV--------NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ I G+ + V E+ R E A + KL + YQG ++ NL
Sbjct: 292 NDKDINGQNLYVGRAQKKRERIEELKRQYETARL-EKL-SKYQGV-----NLFVKNLDDS 344
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ S L + F+ + SA+V+ + + G+S+GFGFV F + E+ A+ MN G+P
Sbjct: 345 IDSVKLEEEFKPFGTITSARVMVDEH-GKSKGFGFVCFSSPEEATKAITEMNQRMFHGKP 403
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 404 LYVALAQRK 412
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + F+ G + S ++ D + S+ FGFV + E A+ AI
Sbjct: 140 IFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEQGN-SKCFGFVHYETAEAARAAIENV 198
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + + K + F + +Y N+ G + + +R+
Sbjct: 199 NGMLLNDREVYVG-----KHVSKKDRESKFEEMKANFTN----VYVKNIDLGFSEEEMRN 249
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ G +++ + + G+S+GFGFV FE+ E A++ +N ++ G+ L + A +
Sbjct: 250 LFEPY-GKITSLHLEKDAEGKSKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGRAQK 308
Query: 295 R 295
+
Sbjct: 309 K 309
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ L+V NL S+ S L E F GT+ SA ++ D +S+GFGFV S EEA +A
Sbjct: 332 QGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVDE-HGKSKGFGFVCFSSPEEATKA 390
Query: 171 I-----RLFDG 176
I R+F G
Sbjct: 391 ITEMNQRMFHG 401
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
D+ +Y G L + L + F + S +V + T +S G+ +V F ED +
Sbjct: 47 DTSASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEK 106
Query: 273 ALDAMNGVEVEGRPLRLNMANERAP 297
A+D +N ++GRP R+ M ++R P
Sbjct: 107 AIDDLNYSLIDGRPCRI-MWSQRDP 130
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T + L ++F + G V S + D + RS G+G+V +V +A +AI +
Sbjct: 31 LYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIEVL 90
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G+ +++ + + P ++ S G IY NL + ++ L D
Sbjct: 91 NFTPVNGKPIRIMY---------SYRDPTIRKSGTG------NIYIKNLDKAIDNKALHD 135
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV + G+S G+GFV F+ E ++A+D +NG+ + N+
Sbjct: 136 TFSAFGSILSCKVATDSL-GQSLGYGFVQFDNEESAKNAIDKLNGM----------LLND 184
Query: 295 RAPPVLPAAKETKTENSID 313
+ V P ++ + E++ID
Sbjct: 185 KQVYVGPFLRKQERESAID 203
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 107 AASDEAA--RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+A D+A +YV NL + T L ++F E GT+ SA ++ D +SR FGFV +
Sbjct: 200 SAIDKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDG-NGKSRCFGFVNFENP 258
Query: 165 EEAKEAIRLFDGSQIG------GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
++A +++ +G G+ K + EV G + + +QG +
Sbjct: 259 DDAAQSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGL-----NL 313
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL +T L++ F + S KV+ + G SRG GFV F TAE+ AL MN
Sbjct: 314 YVKNLDDSITDDKLKELFSEFGTITSCKVMRDP-NGVSRGSGFVAFSTAEEASRALTEMN 372
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 373 GKMVVSKPLYVALAQRK 389
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+Y+ NL ++ + +L + F+ G++ S ++ D + +S G+GFV + E AK AI
Sbjct: 119 IYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSL-GQSLGYGFVQFDNEESAKNAIDKL 177
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSP--HKIYAGNLGWGLTSQG 231
+G + + V V GP L+ + +D + +Y NL T +
Sbjct: 178 NGMLLNDKQVYV--------------GPFLRKQERESAIDKATFNNVYVKNLSETTTEED 223
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
L+ F G+ G +++ V+ G+SR FGFV FE +D +++A+NG
Sbjct: 224 LKKIF-GEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAAQSVEALNG 270
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 204 LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVT 263
+ N FV P +Y G+L +T L D F ++S +V + + RS G+G+V
Sbjct: 19 VSNGVNQFV--PTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVN 76
Query: 264 FETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPV 299
+ D A++ +N V G+P+R+ M + R P +
Sbjct: 77 YNNVHDAAQAIEVLNFTPVNGKPIRI-MYSYRDPTI 111
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+ LYV NL S+T L E+F+E GT+ S +++ D SRG GFV + EEA A
Sbjct: 309 QGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDP-NGVSRGSGFVAFSTAEEASRA 367
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY 208
+ +G + + + V + R ER A +LQ Y
Sbjct: 368 LTEMNGKMVVSKPLYVALAQ--RKEERRA---RLQAQY 400
>gi|71993217|ref|NP_001021711.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
gi|38422743|emb|CAE54917.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
Length = 586
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N +L ++FA+ G + S E++ V +S+GFGFV + EEA+ A++
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ--------NSYQGFVDSPHKIYAGNLGWG 226
S I G +K++ + ER A K YQG +Y NL
Sbjct: 213 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-----NLYVKNLDET 267
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ GL+ F+ + SAKV+ + GRS+GFGFV FE E+ SA+ MN V +P
Sbjct: 268 VDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 326
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 327 LYVAIAQRK 335
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ +S A LYVG+L + S L E F+ AG V S + D T S G+ +V
Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQP 83
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGE------------------RAAMGP 202
+A+ A+ + + G+ +++ + P + R G RA
Sbjct: 84 ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNR 143
Query: 203 KLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+L + + F + +Y N G + L F + S +V+ G+S+GFGFV
Sbjct: 144 ELGETAKQFTN----VYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFV 197
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F E+ ++A+ A++ +EG L+L++
Sbjct: 198 AFANPEEAETAVQALHDSTIEGTDLKLHVC 227
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L + L + F +LS +V + T S G+ +V F+ D + A+D M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 278 NGVEVEGRPLRLNMANERAP 297
N + G+P+R+ M ++R P
Sbjct: 94 NFEALHGKPMRI-MWSQRDP 112
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++S++ +++G+L M S L F++AG V S +I+ ++ T +S +GFV +
Sbjct: 132 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ ++G+ + + ++N+ G +RA G S I+ G+L
Sbjct: 192 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETG------------SDFSIFVGDLA 239
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T LRD F + P L AKV+ + TG S+G+GFV F + A+ MNGV
Sbjct: 240 SDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCS 299
Query: 284 GRPLRLNMANERAP 297
R +R+ +A + P
Sbjct: 300 SRAMRIGVATPKKP 313
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F + G V S +I +G GFV A+EAI+
Sbjct: 351 IFVGGLDSDVTDEELRQSFNQFGEVVSVKI------PAGKGCGFVQFSDRSSAQEAIQKL 404
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
G+ IG + V++++ P + RA G + Y G
Sbjct: 405 SGAIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNG 441
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 101 EEEPKVAASDEA-ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
+E K A SD+A + L+ G+L + + ++L E F + A +V D+ T RSRGFG+V
Sbjct: 168 DEASKKAKSDDAPSTLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYV 227
Query: 160 TMGSVEEAKEAIRLFDGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDSP 215
E A +A G ++ GR + +++ P + +RAA +
Sbjct: 228 DFADSESATKAYEAMQGQEVDGRALNLDYANAKPAESKPQDRAA--DRASRHGDTLSAES 285
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++ GNL + +R+ F + S ++ + +G +GFG+VTF + +D ++AL+
Sbjct: 286 ETLFVGNLPFDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFNSIDDAKTALE 345
Query: 276 AMNGVEV----EGRPLRLNMANERAP 297
A NG + R +RL+ A R P
Sbjct: 346 AKNGASIGNGRNARAVRLDFAGSRPP 371
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+E E A + E +YV N M L E+F++ G S +++ D +SRGFGF
Sbjct: 177 QEREAELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDE-NGQSRGFGF 235
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQG 210
V EEA++A+ +G ++GGR + V + ER + M + N YQG
Sbjct: 236 VNFEKHEEAQKAVSNMNGKELGGRVLYVG--RAQKRSERQSELKRRFEQMKQERVNRYQG 293
Query: 211 FVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDL 270
+Y NL + + LR F + SAKV+ E G S+GFGFV F + E+
Sbjct: 294 V-----NLYVKNLDDIIDDEKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEA 346
Query: 271 QSALDAMNGVEVEGRPLRLNMANER 295
A+ MNG V +PL + +A +
Sbjct: 347 TKAVTEMNGRIVSTKPLYVALAQRK 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + SRGFGFV + E A +AI
Sbjct: 101 IFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDE--NGSRGFGFVHFETHEAANQAINTM 158
Query: 175 DGSQIGGRTVKVNF--PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+G + R V V R E A + N IY N + + L
Sbjct: 159 NGMLLNDRKVFVGHFKSRQEREAELGARALEFTN-----------IYVKNFEGDMDDECL 207
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
++ F LS KV+ + G+SRGFGFV FE E+ Q A+ MNG E+ GR L + A
Sbjct: 208 QELFSQFGKTLSVKVMVDE-NGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRA 266
Query: 293 NERA 296
+R+
Sbjct: 267 QKRS 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I GR +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGIG---------------NIFIKNLDDSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + SRGFGFV FET E A++ MNG+ + R
Sbjct: 116 YDTFSTFGNILSCKVVCDE--NGSRGFGFVHFETHEAANQAINTMNGMLLNDR 166
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++GRP+R+ M ++R P + + ++SID L + ST
Sbjct: 73 NFEVIKGRPIRI-MWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFST 121
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 22/189 (11%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NLP T ++L ++F++ G + S I+ D+S+GFGFV VE+A+ A+
Sbjct: 226 VFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNAL 285
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ-----------NSYQGFVDSPHKIYAGNL 223
+G+++ G+T+ V R ++A +L+ N YQG +Y NL
Sbjct: 286 NGTELAGKTL-----FVARAQKKAEREAELKQRYDALRLERINKYQGI-----NLYVKNL 335
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+ +R F + S K++ + G+SRGFGF+ F +AE+ A+ MNG ++
Sbjct: 336 DDAIDEDKIRTEFAPFGTITSVKIMRDE-KGKSRGFGFICFSSAEEATKAVTEMNGQTIQ 394
Query: 284 GRPLRLNMA 292
G P L +A
Sbjct: 395 GFPKPLYVA 403
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + F+ G + S ++V D + S+G+GFV + E A+ AI
Sbjct: 135 VFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDE--NGSKGYGFVHYETQEAAETAIAKV 192
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G I G+ V V VPR ER +G + FV NL T L D
Sbjct: 193 NGMVINGKQVFVGI-FVPRK-ERVELGEGVTKFTNVFVK--------NLPEDTTDAALND 242
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + S ++ +S+GFGFV +E ED Q+A++A+NG E+ G+ L + A +
Sbjct: 243 MFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQK 302
Query: 295 RA 296
+A
Sbjct: 303 KA 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L +T + L E+F G V S + D +T RS G+ +V + +A+ A+
Sbjct: 47 LYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDTL 106
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ S I G+ ++ + + ++ +G ++ NL + ++ L D
Sbjct: 107 NYSLIRGKPCRIMWSQRDPAVRKSGLG---------------NVFIKNLDKTIDNKALLD 151
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
F +LS KV+ + S+G+GFV +ET E ++A+ +NG+ + G+
Sbjct: 152 TFSAFGNILSCKVVTDE--NGSKGYGFVHYETQEAAETAIAKVNGMVINGK 200
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 81 SQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
+Q + E E E ++ +A+ E K + LYV NL ++ + FA GT+
Sbjct: 300 AQKKAEREAELKQRYDALRLERINKY----QGINLYVKNLDDAIDEDKIRTEFAPFGTIT 355
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGG 181
S +I+ D +SRGFGF+ S EEA +A+ +G I G
Sbjct: 356 SVKIMRDE-KGKSRGFGFICFSSAEEATKAVTEMNGQTIQG 395
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F ++S +V + T RS G+ +V F A D + ALD +
Sbjct: 47 LYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDTL 106
Query: 278 NGVEVEGRPLRLNMANERAPPV----LPAAKETKTENSIDGSELLSSIS 322
N + G+P R+ M ++R P V L + +ID LL + S
Sbjct: 107 NYSLIRGKPCRI-MWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFS 154
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +YVG L ++ + L E+F +AG V + + DRVT +G+GFV E
Sbjct: 6 IAERNQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDP 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D SRGFGFV + E A++AI
Sbjct: 113 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINTM 170
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V + R E A +G + F + IY NL + QGL+D
Sbjct: 171 NGMLLNDRKVFVGHFKSRRERE-AELGARALE----FTN----IYVKNLPVDVDEQGLQD 221
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SR FGFV FE E+ Q A+ MNG EV GR L A +
Sbjct: 222 LFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 280
Query: 295 RA 296
R
Sbjct: 281 RV 282
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRV-----TDRSRGFGFVTMGSV--- 164
A LYVG+L +T + L E F+ AG + S + D T RS G+ ++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYINFQQPADG 70
Query: 165 -EEAKEAIRLFDG---SQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
E+A+ A R D + G+ +++ + + G ++ +G I+
Sbjct: 71 EEQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVG---------------NIFI 115
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + ++ L D F +LS KV+ + + SRGFGFV FET E Q A++ MNG+
Sbjct: 116 KNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGM 173
Query: 281 EVEGR 285
+ R
Sbjct: 174 LLNDR 178
>gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 375 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 430
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 431 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 477
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 478 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 534
Query: 289 LNMA 292
L+ A
Sbjct: 535 LDWA 538
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI S+G ++ + +A++
Sbjct: 284 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGNSKGIAYIEFKTEADAEKT 338
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 339 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 387
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 388 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 439
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 440 EIEGRAIRLELQGPRGSP 457
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 167 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 226
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 227 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 277
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + A L T L++ F+ +A+
Sbjct: 278 -----------------DSKKERDARTL----LAKNLPYKVTQDELKEVFED-----AAE 311
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G S+G ++ F+T D + + G E++GR + L E+
Sbjct: 312 IRLVSKDGNSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 360
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 21/197 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG L +++ + L ++F+ G+V+S + D +T S G+ +V E ++AI
Sbjct: 40 ASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGRQAIE 99
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + I G+ ++ + + P L+ G I+ NL + ++ L
Sbjct: 100 KLNYTPIKGQPCRIMWSQ---------RDPSLRKKGSG------NIFIKNLHADIDNKAL 144
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
D F +LS K+ + TG S+GFGFV FE+ E + A+DA+NG+ + G+ + +
Sbjct: 145 HDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEVYV--- 201
Query: 293 NERAPPVLPAAKETKTE 309
AP V +++K E
Sbjct: 202 ---APHVSRKDRQSKLE 215
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +++ NL + + +L + F+ G + S +I D VT S+GFGFV S E A+EAI
Sbjct: 127 SGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAI 186
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+G + G+ V V P V R ++ KL+ + F + +Y N+ Q
Sbjct: 187 DAINGMLLNGQEVYVA-PHVSRKDRQS----KLEEAKANFTN----VYIKNISLETPEQE 237
Query: 232 LRDAFQGQPGLLSAKVIFERYT-GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+ F+ + S V E+ + G+ RGFGFV +ET A++ +NGVE G+ L +
Sbjct: 238 FEEFFKKVAPVTS--VHLEKDSEGKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVG 295
Query: 291 MANER 295
A ++
Sbjct: 296 RAQKK 300
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 104 PKVAASDEAARL----------YVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRS 153
P V+ D ++L Y+ N+ E F + V S + D +
Sbjct: 203 PHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAPVTSVHLEKDS-EGKL 261
Query: 154 RGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQ 205
RGFGFV + A +A+ +G + G+ + V E+ R E++ + +
Sbjct: 262 RGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQELRRQYEQSKL--EKM 319
Query: 206 NSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
YQG ++ NL + + LR+ F + S KV+ G+S+GFGFV F
Sbjct: 320 EKYQGV-----NLFIKNLDDSIDDERLREEFSPFGTITSVKVMTTE-NGKSKGFGFVCFS 373
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANER 295
T E+ A+ N V G+PL + +A +
Sbjct: 374 TPEEATKAITEKNQQIVAGKPLYVAIAQRK 403
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + L F +AG V A+IV DRV+ RS+G G+V + E
Sbjct: 161 DERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESV 220
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYAGNLGWG 226
AIRL G + G + E + R A P+ Q +P H++Y GN+ +
Sbjct: 221 AAAIRL-TGQMLLGIPIIAQLTEAEK--NRQARNPEATAGNQH--TAPFHRLYVGNVHFS 275
Query: 227 LTSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+T L + F+ P G L + + TGRS+G+ FV F E + AL+ MNG E+ GR
Sbjct: 276 ITEDDLTNVFE--PFGELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFELAGR 333
Query: 286 PLRLNMANERAPP 298
+R+ + N++ P
Sbjct: 334 AIRVGLGNDKFTP 346
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++S++ +++G+L M S L F++AG V S +I+ ++ T +S +GFV +
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 167 AKEAIRLFDGSQI--GGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ ++G+ + + ++N+ G +RA G S I+ G+L
Sbjct: 138 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETG------------SDFSIFVGDLA 185
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T LRD F + P L AKV+ + TG S+G+GFV F + A+ MNGV
Sbjct: 186 SDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCS 245
Query: 284 GRPLRLNMANERAP 297
R +R+ +A + P
Sbjct: 246 SRAMRIGVATPKKP 259
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG L +T L + F + G V S +I +G GFV A+EAI+
Sbjct: 297 IFVGGLDSDVTDEELRQSFNQFGEVVSVKI------PAGKGCGFVQFSDRSSAQEAIQKL 350
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQG 210
G+ IG + V++++ RA G + Y G
Sbjct: 351 SGAIIGKQAVRLSWGRTANKQMRADSGSQWNGGYNG 386
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T S L +VF + G V S + D T RS G+G+V S ++A A+ +
Sbjct: 39 LYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDIL 98
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + +++ + + P ++ S G I+ NL + + L D
Sbjct: 99 NFTPFNNKPIRIMY---------SHRDPSIRKSGTG------NIFIKNLDKTIDHKALHD 143
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F +LS KV + +G+SRG+GFV F+ E Q+A+D +NG+
Sbjct: 144 TFSSFGNILSCKVATDS-SGQSRGYGFVQFDNEEAAQNAIDKLNGM 188
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A++ + +YV NL S T L +F E G + SA I+ D +S+ FGFV + +
Sbjct: 209 ASNKKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRD-ADGKSKCFGFVNFENTDA 267
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNL 223
A +A+ +G +I + V + + ER + + + S + VD +Y NL
Sbjct: 268 AAKAVESLNGKKIDDKEWYVG--KAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNL 325
Query: 224 GWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
++ + L++ F + S KV+ + +G SRG GFV F T E+ AL MNG V
Sbjct: 326 DDSISDENLKELFSDFGMITSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKMVV 384
Query: 284 GRPLRLNMANER 295
+PL + +A +
Sbjct: 385 SKPLYVALAQRK 396
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ +L + F+ G + S ++ D + +SRG+GFV + E A+ AI
Sbjct: 127 IFIKNLDKTIDHKALHDTFSSFGNILSCKVATDS-SGQSRGYGFVQFDNEEAAQNAIDKL 185
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V R ER + K N+ +Y NL T + L++
Sbjct: 186 NGMLLNDKQVYVG--HFLRKHERDSASNKKFNN----------VYVKNLSESTTEEDLKN 233
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F G+ G +++ VI G+S+ FGFV FE + A++++NG +++ + + A +
Sbjct: 234 IF-GEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESLNGKKIDDKEWYVGKAQK 292
Query: 295 RA 296
++
Sbjct: 293 KS 294
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P +Y G+L +T L D F ++S +V + T RS G+G+V + + +D AL
Sbjct: 36 PTSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARAL 95
Query: 275 DAMNGVEVEGRPLRLNMANERAPPV 299
D +N +P+R+ M + R P +
Sbjct: 96 DILNFTPFNNKPIRI-MYSHRDPSI 119
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 71 SFDGFQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSS 128
S +G ++ + + +++ E E E + E+ A D + LY+ NL S++ +
Sbjct: 274 SLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDEN 333
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
L E+F++ G + S +++ D + SRG GFV + EEA A+ +G + + + V
Sbjct: 334 LKELFSDFGMITSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYV 390
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L F + G V A+IV DRV+ RS+G G+V + E
Sbjct: 172 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESV 231
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
AI+L G ++ G + E + R P+ S + H++Y GN+ + +
Sbjct: 232 PAAIQL-TGQRLLGIPIIAQLTEAEK--NRQVRNPEATTSNPNQIPF-HRLYVGNIHFSI 287
Query: 228 TSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P G L + + GRSRG+GFV F + AL+ MNG ++ GRP
Sbjct: 288 TEADLQNVFE--PFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 345
Query: 287 LRLNMANERAPP 298
+R+ + N++ P
Sbjct: 346 IRVGLGNDKFTP 357
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L S+ L E F+E V I+ D T RS+G +V ++ A
Sbjct: 227 DARTVFCMQLARSIRPRDLEEFFSEVAKVRDVRIITDSKTRRSKGIAYVEFWDLDSVPLA 286
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ L G ++ G + V P E+ M + + P K+Y G+L + +T +
Sbjct: 287 LSLH-GKRLLGAPIVVQ----PTQSEKNRMASAMLATAFTQNRGPMKLYVGSLHFNITEE 341
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + T RSRG+GF+TF +ED + A++ +NG E+ GRP+++
Sbjct: 342 MLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQLNGFELAGRPMKVG 401
Query: 291 MANERAPPVLPAAKETKTENSIDGSEL 317
E + T + S+D EL
Sbjct: 402 HVTEH--------QNTLFQPSLDSDEL 420
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +YVG L T + L E+F ++G V + + DRVT +G+GFV E
Sbjct: 6 IAERNQDATIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKSLDVGANIFIGNLDL 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 103 EPKVAASDEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
EP+V D R ++V + + L F G V A+IV DRVT RS+G G+V
Sbjct: 169 EPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEF 228
Query: 162 GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAG 221
E +A+ L G ++ G + E + RAA + + H++Y G
Sbjct: 229 KEEESVPKALELT-GQKLKGVPIIAQLTEAEKN--RAARPSEGGAAPGANGAPFHRLYVG 285
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFER---YTGRSRGFGFVTFETAEDLQSALDAMN 278
N+ + +T + L++ F+ P +VI +R GRS+G+GFV F + AL MN
Sbjct: 286 NIHFSVTEKDLQEIFE--PYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMN 343
Query: 279 GVEVEGRPLRLNMANERAPP 298
G E+ GR +R+ + N++ P
Sbjct: 344 GFELAGRQIRVGLGNDKFTP 363
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 26/199 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T S L ++F + G V S + D T RS G+G+V S ++A A+ +
Sbjct: 26 LYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDML 85
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + G +++ + + P ++ S G I+ NL G+ + L D
Sbjct: 86 NFTPLNGSPIRIMY---------SHRDPSVRKSGSG------NIFIKNLDKGIDHKALHD 130
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV + +G+S+G+GFV F+ E Q A++ +NG+ + N+
Sbjct: 131 TFSAFGNILSCKVATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGM----------LLND 179
Query: 295 RAPPVLPAAKETKTENSID 313
+ V P ++ + E++ID
Sbjct: 180 KQVYVGPFLRKQERESAID 198
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
+P V S + +++ NL + +L + F+ G + S ++ D + +S+G+GFV
Sbjct: 101 HRDPSVRKSG-SGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDS-SGQSKGYGFVQ 158
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS-YQGFVDSP--HK 217
+ E A++AI +G + + V V GP L+ + +D +
Sbjct: 159 FDNEESAQKAIEKLNGMLLNDKQVYV--------------GPFLRKQERESAIDKTRFNN 204
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y NL T + L+ AF G+ G +++ V+ G+++ FGFV FE A+D +A++A+
Sbjct: 205 VYVKNLSETTTEEDLKKAF-GEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAVEAL 263
Query: 278 NGVEVEGR 285
NG + + +
Sbjct: 264 NGKKFDDK 271
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL + T L + F E GT+ SA ++ D +++ FGFV + ++A A+
Sbjct: 205 VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDG-DGKTKCFGFVNFENADDAATAVEAL 263
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQG 231
+G + + V + + ER + + + S + D +Y NL +
Sbjct: 264 NGKKFDDKEWFVG--KAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDR 321
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L+ F + S KV+ + G SRG GFV F T E+ AL MNG V +PL + +
Sbjct: 322 LKQLFSPFGTITSCKVMRDP-NGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 292 ANER 295
A +
Sbjct: 381 AQRK 384
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASD-EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
++ E E E V E+ K AA + A LY+ NL S+ L ++F+ GT+ S +++
Sbjct: 280 KKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMR 339
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
D SRG GFV + EEA +A+ +G + + + V
Sbjct: 340 DP-NGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYV 378
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L S+T + L E F+ G V S + D +T RS G+ +V S +A AI +
Sbjct: 39 LYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAHAIDVL 98
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ I G+ ++V + + R+ +G I+ NL + ++ L D
Sbjct: 99 NFQVINGKPIRVLYSQRDPAVRRSGVG---------------NIFIKNLDKAIDNKALLD 143
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + SAKV + G S+G+GFV FET E Q+A+D +NG+E+ + + +
Sbjct: 144 TFAQFGTITSAKVAMDG-QGNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQR 202
Query: 295 RA 296
RA
Sbjct: 203 RA 204
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA+ GT+ SA++ D + S+G+GFV + E A+ AI
Sbjct: 127 IFIKNLDKAIDNKALLDTFAQFGTITSAKVAMDGQGN-SKGYGFVQFETQEAAQAAIDNV 185
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G ++ + V V R ER+ G N+ +Y NL L+ + LR+
Sbjct: 186 NGMELNDKQVYVG--PFQRRAERSNTGEAKFNN----------VYVKNLSENLSDEKLRE 233
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
F + G +++ VI G+S+GFGFV +E E +A++ ++G
Sbjct: 234 KF-AEHGAVTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVEKLDG 277
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL +++ L E FAE G V S I+ D +S+GFGFV E A A+
Sbjct: 217 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDE-EGKSKGFGFVCYEEPEGAAAAVEKL 275
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVD--SPHKIYAGNLGWGLTSQG 231
DG +T V + + ER A + K + ++ + +Y NL G +
Sbjct: 276 DGYTEDEKTWVVCRAQ--KKAEREAELKAKFDQERRERMEKMAGANLYIKNLEDGTDDEK 333
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
LR+ F+ + G +++ + +G SRG FV F + ++ A+ MNG V +PL + +
Sbjct: 334 LRELFK-EFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVAL 392
Query: 292 ANER 295
A +
Sbjct: 393 AQRK 396
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 72 FDGFQVTEDSQD----EPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSS 127
DG+ TED + + + E E E +A ++E + A LY+ NL
Sbjct: 275 LDGY--TEDEKTWVVCRAQKKAEREAELKAKFDQERRERMEKMAGANLYIKNLEDGTDDE 332
Query: 128 SLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKV 186
L E+F E GT+ S ++ D + SRG FV S +EA A+ +G +G + + V
Sbjct: 333 KLRELFKEFGTITSCRVMRD-ASGVSRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYV 390
>gi|71993209|ref|NP_001021710.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
gi|38422742|emb|CAE54916.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
Length = 583
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N +L ++FA+ G + S E++ V +S+GFGFV + EEA+ A++
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ--------NSYQGFVDSPHKIYAGNLGWG 226
S I G +K++ + ER A K YQG +Y NL
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-----NLYVKNLDET 264
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ GL+ F+ + SAKV+ + GRS+GFGFV FE E+ SA+ MN V +P
Sbjct: 265 VDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 323
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 324 LYVAIAQRK 332
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +++ NL + + S+ + F+ G + S ++ D S+G+GFV + E A+ AI
Sbjct: 56 AGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAI 114
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +G + G+ V V + RA +L + + F + +Y N G +
Sbjct: 115 QKVNGMLLAGKKVFVG-----KFQPRAQRNRELGETAKQFTN----VYVKNFGDHYNKET 165
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L F + S +V+ G+S+GFGFV F E+ ++A+ A++ +EG L+L++
Sbjct: 166 LEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Query: 292 A 292
Sbjct: 224 C 224
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
I+ NL + ++ + D F +LS KV + G S+G+GFV FET E Q+A+ +
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 278 NGVEVEGRPLRLNMANERA 296
NG+ + G+ + + RA
Sbjct: 118 NGMLLAGKKVFVGKFQPRA 136
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V S E+
Sbjct: 43 AHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDG 102
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
++A+ + + I G+ ++ + + P L+ + QG ++ NL +
Sbjct: 103 EKALEELNYTVIKGKPCRIMWSQ---------RDPALRKTGQG------NVFIKNLDHAI 147
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + G S+G+GFV +ETAE +A+ +NG+
Sbjct: 148 DNKALHDTFAAFGNILSCKVAQDEL-GNSKGYGFVHYETAEAANNAIKHVNGM 199
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL +++ + +L + FA G + S ++ D + + S+G+GFV + E A AI+
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHV 196
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V +P+ ER + K + F + IY N+ +T + R+
Sbjct: 197 NGMLLNEKKVFVGH-HIPKK-ERMS---KFEEMKANFTN----IYVKNIDLDVTDEDFRE 247
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + SA + + G+SRGFGFV + E A+D +N +E +G+ L + A +
Sbjct: 248 LFEKHGDITSASIARDD-QGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQK 306
Query: 295 R 295
+
Sbjct: 307 K 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 68/241 (28%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N+ +T E+F + G + SA I D +SRGFGFV E A A+
Sbjct: 231 IYVKNIDLDVTDEDFRELFEKHGDITSASIARDD-QGKSRGFGFVNYIRHEAAAVAVDHL 289
Query: 175 DGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ + G+ + V E+ + E A + + Q+ YQG +Y NL
Sbjct: 290 NDIEFKGQKLYVGRAQKKHEREEELRKQYEAARL--EKQSKYQGV-----NLYIKNLNDD 342
Query: 227 LTSQGLRDAFQGQPGLLSAKVIF------------------------------------- 249
+ + LRD F + SAKVI
Sbjct: 343 VDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQN 402
Query: 250 ---------------ERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
++ G+S+GFGFV F ++ A+ MN +EG+PL + +A
Sbjct: 403 GEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQR 462
Query: 295 R 295
+
Sbjct: 463 K 463
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMG--PKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
DG+ G + N P AA G P + Q + +Y G L +T L
Sbjct: 13 DGADANGAQINTNVP--------AASGDAPTPTTAAQQAHQNSASLYVGELDPSVTEAML 64
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F + S +V + T RS G+ +V + ++ED + AL+ +N ++G+P R+ M
Sbjct: 65 FELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRI-MW 123
Query: 293 NERAP 297
++R P
Sbjct: 124 SQRDP 128
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S + I+ G+L
Sbjct: 159 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDYSIFVGDLAA 206
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNG
Sbjct: 207 DVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCST 266
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 267 RPIRIGPA 274
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+FA + +V A+
Sbjct: 171 PNTDRPFKLNWASYSMGEKRSEVASDYS--IFVGDLAADVTDEMLMELFANKYRSVKGAK 228
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G+ R +++ P PR +
Sbjct: 229 VIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-PATPRRSSGDSGSST 287
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + S K+ + G FV
Sbjct: 288 PGHS-DG--DSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG------FV 338
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 339 QFVSRTDAEEALQGLNGSVIGKQAVRLSWG--RSP 371
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVG L +++ L + FA+ G VAS +I + GFV S +A+EA++
Sbjct: 300 VYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGL 353
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+GS IG + V++++ P + RA G + N Y G
Sbjct: 354 NGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG 390
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S + I+ G+L
Sbjct: 159 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDYSIFVGDLAA 206
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNG
Sbjct: 207 DVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCST 266
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 267 RPIRIGPA 274
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+FA + +V A+
Sbjct: 171 PNTDRPFKLNWASYSMGEKRSEVASDYS--IFVGDLAADVTDEMLMELFANKYRSVKGAK 228
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G+ R +++ P PR +
Sbjct: 229 VIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-PATPRRSSGDSGSST 287
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + S K+ + G FV
Sbjct: 288 PGHS-DG--DSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG------FV 338
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 339 QFVSRTDAEEALQGLNGSVIGKQAVRLSWG--RSP 371
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVG L +++ L + FA+ G VAS +I + GFV S +A+EA++
Sbjct: 300 VYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGL 353
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+GS IG + V++++ P + RA G + N Y G
Sbjct: 354 NGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG 390
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 102 EEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA---GTVASAEIVYDRVTDRSRGFGF 158
+EPK S EA ++V L MT+ L F + +V IV DR++ RS+G +
Sbjct: 125 DEPKEDDS-EARSVFVSQLAARMTARDLGYFFEDKLGDNSVLDVRIVTDRISRRSKGIAY 183
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
V GS+E +AI L G+ + G + + E R A G N G +
Sbjct: 184 VEFGSIELVDKAISLT-GTIVMGLPIMIQHTEAERNKTHAGDGSI--NLPPGASGRGATL 240
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y G+L + LT ++ F+ L + + TGRS+G+ F+ ++ AED + AL+ M
Sbjct: 241 YVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMALEQME 300
Query: 279 GVEVEGRPLRLNMANER 295
G E+ GR LR+N +E+
Sbjct: 301 GFELAGRTLRVNTVHEK 317
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L E F+ G V ++ DR + RS+G +V V A
Sbjct: 31 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 90
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 91 IGL-TGQRVLGVPIIVQASQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITED 144
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S +++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++
Sbjct: 145 MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 204
Query: 291 MANER 295
ER
Sbjct: 205 HVTER 209
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 25/179 (13%)
Query: 93 EEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDR 152
E++ A +EE K S E+ ++++G L + T +L E F + GTV +I+ D T R
Sbjct: 142 EQQVAQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGR 201
Query: 153 SRGFGFVTM---GSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
SRGFGF++ SV+E + + DG I + +PR +
Sbjct: 202 SRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRA------IPRDEQ------------- 242
Query: 210 GFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAE 268
D KI+ G +G + + + F ++ A+++ ++ TG+SRGFGFVT+++A+
Sbjct: 243 ---DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSAD 298
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 86 ETEQEEEEEEEAVEEEEEP-------KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGT 138
ETE + EE + + ++P + SD+++ L+VG+L +++ +SL E F E
Sbjct: 193 ETEAKTEEPSKKRKALDDPVIPGKKARTDVSDKSSTLFVGSLAWAVDDNSLYEAFQEFAD 252
Query: 139 VASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP-EVPRGGER 197
+ A +V D+ T RSRGFG+V + E A A+ G ++ GR + ++F + P G
Sbjct: 253 LTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFSGQKPAGDGN 312
Query: 198 AAMGPKLQNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGR 255
+ G SP ++ GNL + + + F + S ++ + TG
Sbjct: 313 HQARASDRAQRHGDTVSPESDTLFVGNLPFDVDQDTVNAFFSTAAEVTSVRLPTDPETGN 372
Query: 256 SRGFGFVTFETAEDLQSALDAMNGVEV----EGRPLRLNMANER 295
+GFG+V+F + +D ++A +NG V GR +RL+ A ++
Sbjct: 373 LKGFGYVSFNSIDDAKTAFAQLNGQYVGEGRSGRAVRLDFAGQK 416
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 114 RLYVGNLPYSMTSSSLA---EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+++VG L +++ + L EVF E V SA + DR + +SRGFG+V + AK+A
Sbjct: 214 QIWVGQLSWNVDNDWLKSEMEVFGE---VTSARVQLDRTSGKSRGFGYVDFATAAAAKKA 270
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVD---SPHK-IYAGNLGWG 226
G ++ GR ++++ P+G +N + F D +P ++ GNL +
Sbjct: 271 FDEGQGKEVDGRAIRIDL-STPKGDV-------TENRAKKFNDQRSAPSSTLFIGNLSFD 322
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
++ + +AF + ++ + +GR +GFG+V F E Q+A+DAM G E+ GRP
Sbjct: 323 VSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRP 382
Query: 287 LRLNMANER 295
LRL+ + R
Sbjct: 383 LRLDFSTPR 391
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++I+ G L W + + L+ + + SA+V +R +G+SRGFG+V F TA + A D
Sbjct: 213 NQIWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSRGFGYVDFATAAAAKKAFD 272
Query: 276 AMNGVEVEGRPLRLNMA 292
G EV+GR +R++++
Sbjct: 273 EGQGKEVDGRAIRIDLS 289
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
EE E +++ + + A D L+VGNL +++ L F G + ++ DR T
Sbjct: 213 EEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRET 272
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP---EVPRGGERAAMGPKLQNS 207
R++GFG+V +A +A + ++ GR + V+F + P RA N
Sbjct: 273 GRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARA-------NK 325
Query: 208 YQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
+ +P + ++ GNL + T++ +++ F + + +R +G +GFG+V F +
Sbjct: 326 FGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGS 385
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
E+ +AL+A++G +V GRPLR++ A R
Sbjct: 386 QEEATAALEALHGQDVAGRPLRVDFAAPR 414
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
D ++ GNL W + LR F+ ++ +VI +R TGR++GFG+V F A D
Sbjct: 232 DGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAK 291
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPP 298
A M+ E++GRPL ++ + R P
Sbjct: 292 AQKDMHEYELDGRPLNVDFSTPRQKP 317
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+VGNL +++ L F E G A IV DR T RS+GFG+V +VE A A+
Sbjct: 269 LFVGNLSWNVDEEWLGREFEEFGPKA-VRIVTDRATGRSKGFGYVEFETVEAATAALNAK 327
Query: 175 DGSQIGGRTVKVNF----PEVPRGGERAAMGPKLQNSYQGFVDS--PHKIYAGNLGWGLT 228
G+ + R + ++F PE +RA+ + S G V S ++ GNL + T
Sbjct: 328 KGTDLDNRPLNLDFSTPRPEGQNPRDRASS----RASQHGDVPSRPSDTLFVGNLSFDAT 383
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ + FQ + + + G +GFG+V F + E+ Q A +A+ G E+ GR +R
Sbjct: 384 PDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEALQGAELNGRSMR 443
Query: 289 LNMANER 295
L+ A R
Sbjct: 444 LDFAAPR 450
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 214 SPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
SP+ ++ GNL W + + L F+ + G + +++ +R TGRS+GFG+V FET E +A
Sbjct: 266 SPN-LFVGNLSWNVDEEWLGREFE-EFGPKAVRIVTDRATGRSKGFGYVEFETVEAATAA 323
Query: 274 LDAMNGVEVEGRPLRLNMANER 295
L+A G +++ RPL L+ + R
Sbjct: 324 LNAKKGTDLDNRPLNLDFSTPR 345
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 16/191 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+V ++ A LY+GNL + L E+F + G V + + D++T +G+GFV +
Sbjct: 21 QVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNE 80
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A A++L + ++ G+++++N K + F D I+ GNL
Sbjct: 81 VDADYALKLMNMVKLYGKSLRLN---------------KSAQDRRNF-DVGANIFLGNLD 124
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + D F +L+AK++ + TG SRGFGFV+F+T E +AL AMNG +
Sbjct: 125 PDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICN 184
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 185 RPIHVSYAYKK 195
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+ F F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|302406056|ref|XP_003000864.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261360122|gb|EEY22550.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 769
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP TS SLA+ F++ V A +V D+ T SRGFGFVT+ E+A EA
Sbjct: 40 LFVRSLPPDATSESLADYFSQHFPVKHATVVVDQATKESRGFGFVTLTDAEDALEAKAKL 99
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSY---QGFVDSPHKIYAGNLGWGL-TSQ 230
+ GR + V+ E + QNS + +V SP K+ NL W + T
Sbjct: 100 NNELWEGRRITVDLAEARN---------RDQNSSAIEEAWV-SP-KLIIRNLPWSVKTPA 148
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
L+ FQ + A + GR RGFGFVT ++ ++A+ AMNG ++GR + ++
Sbjct: 149 QLQALFQSYGKIKFADLPMN--NGRLRGFGFVTIRGEKNAENAIKAMNGKGIDGRTIAVD 206
Query: 291 MANER 295
A E+
Sbjct: 207 WAVEK 211
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 102 EEPKVA--ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
E+P+ A ++ + +++ NLP++ T L FA G V A +V DR TDR G GFV
Sbjct: 326 EQPEAAKKTTNNDSTVFIRNLPFTTTDEQLKSHFARFGPVRYARVVMDRATDRPAGTGFV 385
Query: 160 TMGSVEEAKEAIR 172
++K ++
Sbjct: 386 CFFDEADSKACVK 398
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 207 SYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
S + V++ ++ +L TS+ L D F + A V+ ++ T SRGFGFVT
Sbjct: 29 SKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQATKESRGFGFVTLTD 88
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
AED A +N EGR + +++A R
Sbjct: 89 AEDALEAKAKLNNELWEGRRITVDLAEAR 117
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 14/195 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +YV NL + L E+F++ G + S +++ D + SRGFGFV + EE
Sbjct: 185 ARAMEFTNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDS-SGHSRGFGFVNFETHEE 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERA----AMGPKLQNSYQGFVDSPHKIYA 220
A++A+ +G ++ GR + V + V R E M N YQG +Y
Sbjct: 244 AQKAVVHMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGV-----NLYV 298
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL + + LR F + SAKV+ E G S+GFGFV F + E+ A+ MNG
Sbjct: 299 KNLDDSIDDEKLRKEFSPYGMITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 281 EVEGRPLRLNMANER 295
V +PL + +A +
Sbjct: 357 IVGTKPLYVALAQRK 371
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++ D SRGFGFV + E A+ AI
Sbjct: 101 IFIKNLEASIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQHAINTM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + V V + R E +G + F + IY NL + QGL++
Sbjct: 159 NGMLLNDHKVFVGHFKSRRERE-VELGARAME----FTN----IYVKNLQADVDEQGLQE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F +LS KV+ + +G SRGFGFV FET E+ Q A+ MNG EV GR L + A +
Sbjct: 210 LFSQFGKMLSVKVMRDS-SGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQK 268
Query: 295 RA 296
R
Sbjct: 269 RV 270
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ G + S + D T RS G+ ++ +A+ A+
Sbjct: 11 ASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ I G+ +++ + + G ++ +G I+ NL + ++ L
Sbjct: 71 TMNFEMIKGQPIRIMWSQRDPGLRKSGVG---------------NIFIKNLEASIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
D F +LS KV + + SRGFGFV FET E Q A++ MNG+
Sbjct: 116 YDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQHAINTMNGM 161
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ ++ F+ D + ALD M
Sbjct: 13 LYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 278 NGVEVEGRPLRLNMANERAPPVLPAAKET----KTENSIDGSELLSSIST 323
N ++G+P+R+ M ++R P + + E SID L + ST
Sbjct: 73 NFEMIKGQPIRI-MWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFST 121
>gi|254582829|ref|XP_002499146.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
gi|238942720|emb|CAR30891.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
Length = 409
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A ++VGNL Y L + F++ G V A+I+ R RG G V + E+ EAI
Sbjct: 102 ANSVFVGNLTYDCAPEDLKDYFSQIGNVVRADIITSR--GHHRGMGTVEFTNTEDVDEAI 159
Query: 172 RLFDGSQIGGRTVKVNFPEVP-----------RGGER----AAMGPKLQNSYQGFVDSP- 215
R FDG+ R + V P R ER A+ G + G + P
Sbjct: 160 RRFDGAYFMDRQIFVRQDNPPPESNSHERVQERRKERTFAGASSGSNNGTNAGGNSNGPI 219
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++++ NL + + Q L+D F+ ++ A V R G SRGFG V + T E++Q A+
Sbjct: 220 YEVFVANLPYSINWQALKDMFKECGNVIRADVELAR-NGYSRGFGTVIYGTPEEMQDAIA 278
Query: 276 AMNGVEVEGRPLRLNMANERA---PPVLPAAKETK-----TENSIDGSE 316
+G E+EGR L + + A PP P + TE DG E
Sbjct: 279 RFHGYELEGRILEVREGRKSAVDPPPQEPIDDSSNFNSEFTEGVTDGGE 327
>gi|156048606|ref|XP_001590270.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980]
gi|154693431|gb|EDN93169.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 753
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 22/201 (10%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP + T+S+L E+F++ + A +V D VT +S+G+GFVT E+A+ A+ F
Sbjct: 42 LFVRSLPATATTSALTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 175 DGSQIGGRTVKVNFPE------VPRGGE-------------RAAMGPKLQNSYQGFVDSP 215
+G GR +K+ + + + GE AA+ K + +P
Sbjct: 102 NGQSFQGRKMKIEIAQPRSRETIAKSGEEGLPVKRKSAIATEAAVVKKARQEKLAESKAP 161
Query: 216 HKIYAGNLGWGL-TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
K+ NL W + T L F G + A + G+ GFGF+ ++ + AL
Sbjct: 162 PKLIIRNLPWSVKTPDELAKLFMGFGKVKYA--TLPKVKGKEAGFGFIVMRGKKNAEKAL 219
Query: 275 DAMNGVEVEGRPLRLNMANER 295
A+NG E++GR L ++ A E+
Sbjct: 220 AAVNGREIDGRQLAVDWAVEK 240
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
T+ L + F L A V+ + T +S+G+GFVTF AED Q ALD NG +GR +
Sbjct: 52 TTSALTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEFNGQSFQGRKM 111
Query: 288 RLNMANERA 296
++ +A R+
Sbjct: 112 KIEIAQPRS 120
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 101 EEEPKVA-ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFV 159
EE+PK +D ++ L++ NLP++ ++L E F + G V A +V D+ TDR +G GFV
Sbjct: 336 EEKPKKNFITDNSSTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFV 395
Query: 160 TMGSVEEAKEAIR 172
+VE+A R
Sbjct: 396 CFYNVEDADSCFR 408
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+++VG L +++ + L G V SA + DR T +SRGFG+V + AK+A
Sbjct: 208 QVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 267
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS----PHKIYAGNLGWGLTS 229
G ++ GR ++++ P+G +N + F D ++ GNL + ++
Sbjct: 268 GQGKEVDGRAIRLDL-STPKGD-------VTENRAKKFNDQRSAPSSTLFIGNLSFDISE 319
Query: 230 QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
+ +AF + ++ + +GR +GFG+V F E Q+ALDAM G E+ GRPLRL
Sbjct: 320 DDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAMTGQELAGRPLRL 379
Query: 290 NMA 292
+ +
Sbjct: 380 DFS 382
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
++++ G L W + + L+ + + SA+V +R TG+SRGFG+V F TA + A +
Sbjct: 207 NQVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFE 266
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLPAAKETKTENSIDGSELL 318
G EV+GR +RL+++ + AK+ + S S L
Sbjct: 267 EGQGKEVDGRAIRLDLSTPKGDVTENRAKKFNDQRSAPSSTLF 309
>gi|406873754|gb|EKD23843.1| hypothetical protein ACD_81C00167G0002 [uncultured bacterium]
Length = 111
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 56/74 (75%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+LYVG LPYS T +L ++F++AGTV SA I+ D++T RS+GFGFV M S +EA++AI +
Sbjct: 4 KLYVGGLPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEKAIDM 63
Query: 174 FDGSQIGGRTVKVN 187
F+G GR++ VN
Sbjct: 64 FNGKDFEGRSLTVN 77
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
K+Y G L + T L D F + SA +I ++ TGRS+GFGFV + ++ + A+D
Sbjct: 3 KKLYVGGLPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEKAID 62
Query: 276 AMNGVEVEGRPLRLNMAN---ERAP 297
NG + EGR L +N+A ERAP
Sbjct: 63 MFNGKDFEGRSLTVNVARPMEERAP 87
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+ F F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 85 PETEQEEEE--EEEAVEEEEEP--KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVA 140
PE Q E +EE EEE P +V + +++VG + + T S ++ F + G +
Sbjct: 5 PEDNQHELNGYDEEVDEEEGHPGRRVGRDGGSGKIFVGGVAWETTEESFSKHFEKYGAIT 64
Query: 141 SAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAM 200
+ I+ D+ T RGFGFVT + L D I GRTV+V VPR
Sbjct: 65 DSVIMKDKHTKMPRGFGFVTFSDPSVIDKV--LEDDHVIDGRTVEVK-RTVPREEMITKD 121
Query: 201 GPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
GPK + KI+ G L LT L+D F ++ +++ + TGRSRGFG
Sbjct: 122 GPKTR-----------KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFG 170
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
F+TFE+ + ++ + ++ G+ + + A
Sbjct: 171 FITFESEDSVERVISEGRMRDLGGKQVEIKKA 202
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++++G LP S+T L + F+ G V +I+ D T RSRGFGF+T S + + I
Sbjct: 127 KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 186
Query: 174 FDGSQIGGRTVKVNFPEVPRGG 195
+GG+ V++ E + G
Sbjct: 187 GRMRDLGGKQVEIKKAEPKKHG 208
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 405 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 460
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 461 EALNSCNKREIEGRAIRLEL-QGPRGSPNAGSQP------------SKTLFVKGLSEDTT 507
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 508 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 564
Query: 289 LNMA 292
L+ A
Sbjct: 565 LDWA 568
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 314 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 368
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 369 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 417
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 418 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 469
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 470 EIEGRAIRLELQGPRGSP 487
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 197 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 256
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 257 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 307
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 308 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 346
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 347 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 390
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+VG L +++ L F E G +AS I+ DR T +S+GFGFV SV+ A +A+
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK----IYAGNLGWGLTSQ 230
G +I GR V+++F E + + + F D P + ++ GN+ +
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVPKEPSSTLFVGNVSFDANED 122
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
+ + F + + ++ +R TG +GFG+V + +D + A +A+ G E+ GR +RL+
Sbjct: 123 MVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIAGRSIRLD 182
Query: 291 MA 292
+
Sbjct: 183 YS 184
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
++ L+VGN+ + + EVF+E G++ + + DR T +GFG+V M S+++AK A
Sbjct: 107 SSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAF 166
Query: 172 RLFDGSQIGGRTVKVNF 188
G++I GR++++++
Sbjct: 167 EALQGAEIAGRSIRLDY 183
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++ G L W + + L F+ L S +++ +R TG+S+GFGFV F++ + A++
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 278 NGVEVEGRPLRLNMA------NERAP 297
G E++GR +RL+ N+R P
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQNNQRTP 88
>gi|343961999|dbj|BAK62587.1| nucleolin [Pan troglodytes]
Length = 537
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 309 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 364
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 365 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 411
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 412 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 468
Query: 289 LNMA 292
L+ A
Sbjct: 469 LDWA 472
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 218 DAGTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 272
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 273 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 321
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 322 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 373
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 374 EIEGRAIRLELQGPRGSP 391
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 101 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 160
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 161 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 211
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + AG L T L++ F+ +A+
Sbjct: 212 -----------------DSKKERDAGTL----LAKNLPYKVTQDELKEVFED-----AAE 245
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 246 IRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 294
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV N +L +VFA+ G + S E++ V +S+GFGFV + EEA+ A++
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQ--------NSYQGFVDSPHKIYAGNLGWG 226
S I G +K++ + ER A K YQG +Y NL
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-----NLYVKNLDET 327
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ GL+ F+ + SAKV+ + GRS+GFGFV FE E+ SA+ MN V +P
Sbjct: 328 VDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 287 LRLNMANER 295
L + + +
Sbjct: 387 LYVAIGQRK 395
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+ +S A LYVG+L + S L E F+ AG V S + D T S G+ +V
Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQP 83
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A+ A+ + + G+ +++ + + R+ G I+ NL
Sbjct: 84 ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG---------------NIFIKNLD 128
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ ++ + D F +LS KV + G S+G+GFV FET E Q+A+ +NG+ + G
Sbjct: 129 KVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAG 187
Query: 285 RPLRLNMANERA 296
+ + + RA
Sbjct: 188 KKVFVGKFQPRA 199
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A +++ NL + + S+ + F+ G + S ++ D S+G+GFV + E A+ AI
Sbjct: 119 AGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAI 177
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ +G + G+ V V + RA +L + + F + +Y N G +
Sbjct: 178 QKVNGMLLAGKKVFVG-----KFQPRAQRNRELGETAKQFTN----VYVKNFGDHYNKET 228
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L F + S +V+ G+S+GFGFV F E+ ++A+ A++ +EG L+L++
Sbjct: 229 LEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Query: 292 A 292
Sbjct: 287 C 287
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L + L + F +LS +V + T S G+ +V F+ D + A+D M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 278 NGVEVEGRPLRLNMANERAP 297
N + G+P+R+ M ++R P
Sbjct: 94 NFEALHGKPMRI-MWSQRDP 112
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 86 ETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+ + E E + E+ + + + LYV NL ++ L + F G + SA+++
Sbjct: 290 QKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVM 349
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAI 171
D RS+GFGFV EEA A+
Sbjct: 350 TDE-NGRSKGFGFVCFEKPEEATSAV 374
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR-VTDRSRGFGFVTMGS 163
+ A + + LY+GN+ +T LAE+F+ AG V SA+I+ DR +GFV
Sbjct: 5 QAAEAPKKPHLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTD 64
Query: 164 VEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHK--IYAG 221
+ A++A+ +G +I ++VN+ +G D+ H ++ G
Sbjct: 65 MRSAEQALTTLNGRKIFDSEIRVNWAYQGQGNRE---------------DTQHHFHVFVG 109
Query: 222 NLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVE 281
+L + L AF L A+V+++ +G+SRG+GF++F D + A+ MNG
Sbjct: 110 DLSPEVNDDILGKAFAKFASLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEW 169
Query: 282 VEGRPLRLNMANER 295
+ R +R+N AN++
Sbjct: 170 LGSRAIRVNWANQK 183
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L + L + FA+ +++ A +++D + +SRG+GF++ +A++AI
Sbjct: 105 HVFVGDLSPEVNDDILGKAFAKFASLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIAT 164
Query: 174 FDGSQIGGRTVKVNFP--EVPRGGERA-AMGPKLQNSYQGF-------------VDSPHK 217
+G +G R ++VN+ + GG R+ +G QGF D
Sbjct: 165 MNGEWLGSRAIRVNWANQKTQTGGSRSLGLG-------QGFNGPLTFEQVAAQTPDYNTT 217
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y GNL T L FQ + I E RGF FV +T + ++ ++
Sbjct: 218 VYVGNLIPYTTQADLIPLFQ------NYGYIVEIRMQADRGFAFVKLDTHANAALSITSL 271
Query: 278 NGVEVEGRPLRLNMANER 295
V GRP++ + +R
Sbjct: 272 QNQLVHGRPIKCSWGKDR 289
>gi|355761078|gb|EHH61752.1| hypothetical protein EGM_19839, partial [Macaca fascicularis]
Length = 705
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 477 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 532
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 533 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 579
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 580 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 636
Query: 289 LNMANER 295
L+ A +
Sbjct: 637 LDWAKPK 643
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 386 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 440
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 441 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 489
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 490 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 541
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 542 EIEGRAIRLELQGPRGSP 559
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 79 EDSQDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEV 132
E ++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++V
Sbjct: 266 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV 325
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
FA+ V D +R FG+V S E+ ++A+ L G ++ G +K+ E P
Sbjct: 326 FAKNDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKP 376
Query: 193 RGG----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+G ER A + A NL + +T L++ F+ +A++
Sbjct: 377 KGKDSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIR 415
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 416 LVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 462
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
A +E A ++ G L +++ L F V A ++ +R T +SRG+G+V S
Sbjct: 228 TATDEEPATVFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKA 287
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ-GFVDSP--HKIYAGN 222
A++AI G +I GR + ++ G A P + Q G SP ++ GN
Sbjct: 288 AAEKAIEEMQGREIDGRPINLDL----STGRPHATKPNNDRAKQFGDQQSPPSDTLFIGN 343
Query: 223 LGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
L + L + F ++S ++ T + +GFG+V F + ++ ++AL+A+NG +
Sbjct: 344 LSFNANRDKLFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFGSVDEAKAALEALNGEYL 403
Query: 283 EGRPLRLNMANER 295
EGRP RL+ + R
Sbjct: 404 EGRPCRLDFSAPR 416
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 215 PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSAL 274
P ++AG L W + L+ F+ G++ A+VI ER TG+SRG+G+V F + + A+
Sbjct: 234 PATVFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAI 293
Query: 275 DAMNGVEVEGRPLRLNMANERAPPVLP 301
+ M G E++GRP+ L+++ R P
Sbjct: 294 EEMQGREIDGRPINLDLSTGRPHATKP 320
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKILNMIKLYGKPIRVN---------KASQDKK-------SLDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + L D F +++ K++ + TG SRGFGFV++++ E A++AMN + R
Sbjct: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNR 182
Query: 286 PLRLNMANER 295
P+ ++ A ++
Sbjct: 183 PITVSYAYKK 192
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 104 PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGS 163
P+ + +E L++G+L M + F++ G V S +++ ++ T + G+GF+ + +
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 164 VEEAKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP-HKIYA 220
A+ ++ ++G+ + + ++N+ + G RA D+P + I+
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRAD-------------DTPDYTIFV 172
Query: 221 GNLGWGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
G+L +T L++ F+G P + AKV+ +R TGRS+G+GFV F + A++ MNG
Sbjct: 173 GDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNG 232
Query: 280 VEVEGRPLRLNMANERAP 297
+ RP+R+ A + P
Sbjct: 233 MFCSTRPMRIGPAATKKP 250
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVF-AEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++VG+L +T L E F +V A++V DR T RS+G+GFV G E A+
Sbjct: 170 IFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNE 229
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS--YQGFVDSPHK-IYAGNLGWGLTSQ 230
+G R +++ + +G QN+ QG D + I+ G L +T
Sbjct: 230 MNGMFCSTRPMRIG-----PAATKKPVGASFQNTQGXQGESDPNNTTIFVGGLDSNVTDD 284
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F L+ K+ + G FV F + AL +NG ++ + +RL+
Sbjct: 285 YLRQVFSQYGELVHVKIPVGKRCG------FVQFANRACAEQALAGLNGTQLGAQSIRLS 338
Query: 291 M----ANERAPP 298
+N++A P
Sbjct: 339 WGRSPSNKQAQP 350
>gi|332815667|ref|XP_516145.3| PREDICTED: nucleolin [Pan troglodytes]
Length = 711
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 483 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 538
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 539 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 585
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 586 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 642
Query: 289 LNMANER 295
L+ A +
Sbjct: 643 LDWAKPK 649
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 392 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 446
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 447 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 495
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 496 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 547
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 548 EIEGRAIRLELQGPRGSP 565
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 275 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 334
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 335 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 385
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + A L T L++ F+ +A+
Sbjct: 386 -----------------DSKKERDARTL----LAKNLPYKVTQDELKEVFED-----AAE 419
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 420 IRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 468
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L + S L E+F+ G VAS + D VT RS G+ +V + +A+ A+
Sbjct: 41 LYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDTM 100
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ S I G+ ++ + + P L+ S G I+ NL + ++ L D
Sbjct: 101 NFSMIKGKPCRIMW---------SQRDPSLRRSGVG------NIFVKNLNEAIDNKQLYD 145
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRL 289
F +LS KV+ +R G S G+G+V +ETAE +A++ ++G+ ++G+ +++
Sbjct: 146 TFSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQV 200
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA-- 167
D Y+ N+PY + L + FA+ G V SA + + T+++ GFGF+ E A
Sbjct: 213 DSWTNCYIKNVPYEWDDARLNQEFAQFGEVLSATVSRED-TNQTLGFGFINFAEHESAVA 271
Query: 168 -------KEAIRLFDGSQIG-----GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSP 215
KE DG +I GR K + E + A + +QG
Sbjct: 272 AVEALNGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKFQGV---- 327
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+Y NL +T LRD F + SA+V+ + GRSRGFGFV + T E+ A++
Sbjct: 328 -NLYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVN 386
Query: 276 AMNGVEVEGRPLRLNMANER 295
MNG + +P+ + +A R
Sbjct: 387 EMNGKLIANKPIFVALAQRR 406
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 66 RQFSASFDGFQVTEDSQ-DEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSM 124
++++ + DG ++T+ + + E E E A E E+ + + LYV NL S+
Sbjct: 279 KEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKFQGVNLYVKNLDDSV 338
Query: 125 TSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTV 184
T L + FA GT+ SA ++ D RSRGFGFV + EE+ A+ +G I + +
Sbjct: 339 TDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIANKPI 398
Query: 185 KV 186
V
Sbjct: 399 FV 400
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A+S A LYVG+L +T + L E F+ AG V S + D +T RS G+ +V +
Sbjct: 5 ASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + I G+ +++ + + P L+ S G ++ NL
Sbjct: 65 AERALDTMNFDVIKGKPIRIMWSQ---------RDPSLRKSGVG------NVFIKNLDKS 109
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ ++ L D F +LS KV+ E GRS+GFGFV F + E+ A+ MNG V +P
Sbjct: 110 IDNKALYDTFSAFGNILSCKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 167
Query: 287 LRLNMANER 295
L + +A +
Sbjct: 168 LYVALAQRK 176
>gi|422295750|gb|EKU23049.1| hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526]
Length = 227
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 27/196 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VGNL + T+ SL + AG V E+ T RS+G+ VT + E+A A+ L
Sbjct: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELL 64
Query: 175 DGSQIGGR--TVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G ++ GR V+ + E+ + +GFV ++ GNL W +T+ GL
Sbjct: 65 CGREVEGRPLYVREDRTEIEK--------------EEGFV-----VFVGNLPWDMTASGL 105
Query: 233 RDAF-QGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPL--RL 289
R F + P + K +GRSRGFG + F ++E+ Q A++ M+G+ V+ R + RL
Sbjct: 106 RTVFSEFSPYDVHIKT---NMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRL 162
Query: 290 NMANERAPPVLPAAKE 305
+ A+ PA E
Sbjct: 163 DRAHLEMMGHSPATME 178
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 75 FQVTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA 134
F+ ED+ E E E + E+ +E ++VGNLP+ MT+S L VF+
Sbjct: 51 FETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFS 110
Query: 135 EAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG 194
E + ++ RSRGFG + S EEA+ AI G + R + V
Sbjct: 111 EFSPYDVH--IKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRL------ 162
Query: 195 GERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+RA + ++ +++ + GN+ W
Sbjct: 163 -DRAHL--EMMGHSPATMEASDTVTCGNIPW 190
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +Y G L ++ + L E+F +AG V + + DRVT +G+GFV S E
Sbjct: 6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN----------------KASAHQKNLDVGANIFIGNLDV 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG+S+ F F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMA 292
RP+ ++ A
Sbjct: 170 RPISVSYA 177
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 5/96 (5%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
A++L++G L + T L+E F++ G V A+IV DRV+DRS+GFGFVT S +EA++A+
Sbjct: 33 ASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKAL 92
Query: 172 RLFDGSQIGGRTVKVNFPEVPR-----GGERAAMGP 202
F+G Q+ GRT+ V++ + + GG A GP
Sbjct: 93 MEFNGQQLNGRTIFVDYAKAKQSLGGGGGYPIARGP 128
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ G L + T QGL +AF ++ A+++ +R + RS+GFGFVTF +A++ Q AL
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 277 MNGVEVEGRPLRLNMAN-------------ERAPP---VLPAAKETKTENS 311
NG ++ GR + ++ A R PP V+ A + T+T S
Sbjct: 95 FNGQQLNGRTIFVDYAKAKQSLGGGGGYPIARGPPDPAVIAATRTTETSKS 145
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 19/191 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI+ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKTLNMIKLYGKPIRVN---------KASQDKK-------SLDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLL--SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F G++ + K++ + TG SRGFGFV++E+ E A++AMN +
Sbjct: 123 VDEKLLYDTFSAF-GVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCN 181
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 182 RPITVSYAYKK 192
>gi|426338868|ref|XP_004033393.1| PREDICTED: nucleolin [Gorilla gorilla gorilla]
Length = 710
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 537
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 538 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 584
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 585 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 641
Query: 289 LNMANER 295
L+ A +
Sbjct: 642 LDWAKPK 648
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 391 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 445
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 446 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 494
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 495 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 546
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 547 EIEGRAIRLELQGPRGSP 564
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 63/224 (28%)
Query: 105 KVAASDE-------------------------AARLYVGNLPYSMTS----SSLAEVFAE 135
K A A L+VGNL ++ ++ + +++VFA+
Sbjct: 274 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 333
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG- 194
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 334 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 384
Query: 195 ---GERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 385 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 423
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 424 KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 467
>gi|403278071|ref|XP_003930653.1| PREDICTED: nucleolin-like [Saimiri boliviensis boliviensis]
Length = 713
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 485 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 540
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 541 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 587
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 588 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 644
Query: 289 LNMANER 295
L+ A +
Sbjct: 645 LDWAKPK 651
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 394 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 448
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 449 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 497
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 498 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 549
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 550 EIEGRAIRLELQGPRGSP 567
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 56/213 (26%)
Query: 109 SDEAA------------------RLYVGNLPYSMTS----SSLAEVFAEAGTVASAEIVY 146
+ + A L+VGNL ++ ++ + +++VFA+ V
Sbjct: 288 TKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLA-----VV 342
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRG----GERAAMGP 202
D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G ER A
Sbjct: 343 DVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGKDSKKERDA--- 395
Query: 203 KLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+ A NL + +T L++ F+ +A++ G+S+G ++
Sbjct: 396 -------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVSKDGKSKGIAYI 437
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
F+T D + + G E++GR + L E+
Sbjct: 438 EFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 470
>gi|402889643|ref|XP_003908118.1| PREDICTED: nucleolin isoform 1 [Papio anubis]
Length = 695
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 467 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 522
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 523 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 569
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 570 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 626
Query: 289 LNMANER 295
L+ A +
Sbjct: 627 LDWAKPK 633
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 376 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 430
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 431 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 479
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 480 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 531
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 532 EIEGRAIRLELQGPRGSP 549
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 259 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 318
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 319 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 369
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 370 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 408
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 409 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 452
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 166 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 225
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 226 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGSSG----PMRLYVGSLHFNITED 279
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+R+
Sbjct: 280 MLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVG 339
Query: 291 MANER 295
ER
Sbjct: 340 QVTER 344
>gi|224009309|ref|XP_002293613.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971013|gb|EED89349.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 189
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
R+YVGNL +S L + G V A+I+ RS+G G V S EEA A+
Sbjct: 1 RVYVGNLSWSTGWRDLKDHMKACGDVLRADIMQTH-DGRSKGCGIVEYSSPEEAARAVEE 59
Query: 174 FDGSQIGGRTVKVNFP-EVPRGGERAAMGPKLQN------SY-QGF-VDSPHKIYAGNLG 224
+ S++ GR + V E G G N SY QG + +++ GNL
Sbjct: 60 LNNSELSGRQIFVREDREQTTGSNNRHGGGGFNNQRSHNTSYMQGSPAEEGCQLFVGNLS 119
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
W + L+D F+ Q G + + E GR RGFG V F +A+D Q+A+ +NGV+ G
Sbjct: 120 WETGWRELKDHFR-QCGEVDRAEVAEGNDGRKRGFGLVRFHSAKDAQAAIRKLNGVDFMG 178
Query: 285 RPLRLNMANE 294
RPL + + N+
Sbjct: 179 RPLDVRVDNK 188
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
++E +L+VGNL + L + F + G V AE+ + R RGFG V S ++A+
Sbjct: 107 AEEGCQLFVGNLSWETGWRELKDHFRQCGEVDRAEVA-EGNDGRKRGFGLVRFHSAKDAQ 165
Query: 169 EAIRLFDGSQIGGRTVKV 186
AIR +G GR + V
Sbjct: 166 AAIRKLNGVDFMGRPLDV 183
>gi|406917506|gb|EKD56278.1| RNA-binding protein [uncultured bacterium]
Length = 89
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 110 DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKE 169
+E +LYVGNLPYS TS SL E+FA +G V A ++ D+ + RS+GFGFVTM A++
Sbjct: 2 EEKNKLYVGNLPYSATSDSLKELFAGSGEVVDAVVISDKFSGRSKGFGFVTMKDDAAAEK 61
Query: 170 AIRLFDGSQIGGRTVKVNFPEVPRGGER 197
AI+ DG ++ GR +KVN R R
Sbjct: 62 AIKDTDGKEVDGRNIKVNIARPMRENNR 89
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
+K+Y GNL + TS L++ F G ++ A VI ++++GRS+GFGFVT + + A+
Sbjct: 5 NKLYVGNLPYSATSDSLKELFAGSGEVVDAVVISDKFSGRSKGFGFVTMKDDAAAEKAIK 64
Query: 276 AMNGVEVEGRPLRLNMA 292
+G EV+GR +++N+A
Sbjct: 65 DTDGKEVDGRNIKVNIA 81
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
+++EA ++VG+L + M + L F+ G V+S +I+ ++ T + G+GFV S
Sbjct: 59 GSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAA 118
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ ++ + GS + + ++N+ G RA G L I+ G+L
Sbjct: 119 AEKVLQSYSGSMMPNTEQPFRLNWASFA-GERRADPGSDL------------SIFVGDLA 165
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F G+ P + AKV+ + TGRS+G+GFV F + A+ MNG
Sbjct: 166 ADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCS 225
Query: 284 GRPLRLNMANERAP 297
RP+R+ +A + P
Sbjct: 226 SRPMRIGVATPKKP 239
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKILNMIKLYGKPIRVN---------KASQDKK-------SLDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + L D F +++ K++ + TG SRGFGFV++++ E A++AMN + R
Sbjct: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNR 182
Query: 286 PLRLNMANER 295
P+ ++ A ++
Sbjct: 183 PITVSYAYKK 192
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+E ++VG+L Y M + L F +G V + +++ +R T +S G+GFV S A
Sbjct: 60 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 119
Query: 168 KEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
++A++ F G + R K+N+ G +R+ V S + I+ G+L
Sbjct: 120 EKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSE------------VASDYSIFVGDLAA 167
Query: 226 GLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+T + L + F + + AKVI + TGRSRG+GFV F D A+ MNG
Sbjct: 168 DVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCST 227
Query: 285 RPLRLNMA 292
RP+R+ A
Sbjct: 228 RPIRIGPA 235
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ ASD + ++VG+L +T L E+FA + +V A+
Sbjct: 132 PNTDRPFKLNWASYSMGEKRSEVASDYS--IFVGDLAADVTDEMLMELFANKYRSVKGAK 189
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPK 203
++ D T RSRG+GFV G + A+ +G+ R +++ P PR +
Sbjct: 190 VIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-PATPRRSSGDSGSST 248
Query: 204 LQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFV 262
+S G DS ++ +Y G L ++ LR AF + S K+ + G FV
Sbjct: 249 PGHS-DG--DSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG------FV 299
Query: 263 TFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
F + D + AL +NG + + +RL+ R+P
Sbjct: 300 QFVSRTDAEEALQGLNGSVIGKQAVRLSWG--RSP 332
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVG L +++ L + FA+ G VAS +I + GFV S +A+EA++
Sbjct: 261 VYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGL 314
Query: 175 DGSQIGGRTVKVNFPEVPRGGE-RAAMGPKLQNSYQG 210
+GS IG + V++++ P + RA G + N Y G
Sbjct: 315 NGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG 351
>gi|197098386|ref|NP_001127178.1| nucleolin [Pongo abelii]
gi|75070972|sp|Q5RF26.3|NUCL_PONAB RecName: Full=Nucleolin
gi|55725699|emb|CAH89631.1| hypothetical protein [Pongo abelii]
Length = 712
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 484 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 539
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 540 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 586
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 587 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 643
Query: 289 LNMANER 295
L+ A +
Sbjct: 644 LDWAKPK 650
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 393 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 447
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 448 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 496
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 497 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 548
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 549 EIEGRAIRLELQGPRGSP 566
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 276 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 335
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 336 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 386
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + A L T L++ F+ +A+
Sbjct: 387 -----------------DSKKERDARTL----LAKNLPYKVTQDELKEVFED-----AAE 420
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 421 IRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 469
>gi|397502540|ref|XP_003821912.1| PREDICTED: nucleolin-like [Pan paniscus]
Length = 710
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 537
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 538 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 584
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 585 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 641
Query: 289 LNMANER 295
L+ A +
Sbjct: 642 LDWAKPK 648
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 391 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 445
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 446 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 494
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 495 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 546
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 547 EIEGRAIRLELQGPRGSP 564
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 274 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 333
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 334 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 384
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + A L T L++ F+ +A+
Sbjct: 385 -----------------DSKKERDARTL----LAKNLPYKVTQDELKEVFED-----AAE 418
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 419 IRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 467
>gi|55956788|ref|NP_005372.2| nucleolin [Homo sapiens]
gi|90110781|sp|P19338.3|NUCL_HUMAN RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|62988860|gb|AAY24247.1| unknown [Homo sapiens]
gi|119591367|gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|119591369|gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|168277892|dbj|BAG10924.1| nucleolin [synthetic construct]
Length = 710
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 537
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 538 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 584
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 585 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 641
Query: 289 LNMANER 295
L+ A +
Sbjct: 642 LDWAKPK 648
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 391 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 445
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 446 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 494
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 495 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 546
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 547 EIEGRAIRLELQGPRGSP 564
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 274 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 333
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 334 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 384
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 385 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 423
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 424 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 467
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
R+YVG++ Y + ++ + FA G + S ++ +D VT + +GF FV E A+ A+
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ +GGR +KV P G+ + +L + F ++IY ++ L+ +
Sbjct: 129 QMNSVMLGGRNIKVGRPS--NIGQAQPIIDQLAEEARAF----NRIYVASVHQDLSDDDI 182
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ + S + + TG+ +G+GF+ +E A+ Q A+ +MN ++ G+ LR+ A
Sbjct: 183 KSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 242
Query: 293 NERAPPVL---------PAAKETKT-ENSIDGSELLSSIST 323
P+L PAA T + ++ G+ +L ++ T
Sbjct: 243 VTPPMPLLTPATPGGLPPAATAKITAQEAVAGAAVLGTLGT 283
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAAR--------------LYVGNLPYSMTSSSLA 130
P+T + + EEE + PK AA +A + + V NL +++ L
Sbjct: 251 PKTGKRKAEEEPVI-----PKKAAKTKADQTAGAAAADAGDSKTIIVKNLSWNVDDDWLK 305
Query: 131 EVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE 190
F E G + S + DR + RSRGFGF+ + + +A+ G ++ GR + V+ E
Sbjct: 306 TEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTE 365
Query: 191 V-PRGGE-RAAMGPKLQNSYQGFVDSP----HKIYAGNLGWGLTSQGLRDAFQGQPGLLS 244
PR + RAA F D+P I+ GN+ + L F + S
Sbjct: 366 SNPRNTQARAAK----------FGDTPSEPSQTIFVGNVAFSADEDALWQTFADYGAVRS 415
Query: 245 AKVIFERYTGRSRGFGFVTFETAEDLQSALDA-MNGVEVEGRPLRLNMANER 295
++ +R TG+ +GF +V FE +A +A G+E+ GRP+RL+ + R
Sbjct: 416 VRLPTDRETGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRPVRLDYSQPR 467
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 217 KIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDA 276
K++ G L WG Q LRDAF ++ A+VI +R +GRSRGFGFV F E A+ A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 277 MNGVEVEGRPLRLNMANERAP 297
M+G E++GR +R+++A ERAP
Sbjct: 99 MDGQELQGRNIRVSIAQERAP 119
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +L+VG L + SL + FA G V A ++ DR + RSRGFGFV E A EAI
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 172 RLFDGSQIGGRTVKVNFPE--VPR 193
+ DG ++ GR ++V+ + PR
Sbjct: 97 KAMDGQELQGRNIRVSIAQERAPR 120
>gi|402889645|ref|XP_003908119.1| PREDICTED: nucleolin isoform 2 [Papio anubis]
Length = 683
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 455 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 510
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 511 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 557
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 558 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 614
Query: 289 LNMANER 295
L+ A +
Sbjct: 615 LDWAKPK 621
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 364 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 418
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 419 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 467
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 468 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 519
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 520 EIEGRAIRLELQGPRGSP 537
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 247 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 306
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 307 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 357
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 358 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 396
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 397 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 440
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 17/191 (8%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A ++ A +YVG L ++ + L E+F +AG V + + DRVT +G+GFV E
Sbjct: 6 IAERNQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEE 65
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A AI++ + ++ G+ ++VN +A+ ++Q +D I+ GNL
Sbjct: 66 DADYAIKIMNMIKLYGKPIRVN---------KAS-------AHQKNLDVGANIFIGNLDP 109
Query: 226 GLTSQGLRDAFQGQPGLL-SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F +L + K++ + TG S+GF F+ F + E +A+DAMNG +
Sbjct: 110 EVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCN 169
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 170 RPISVSYAFKK 180
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 166 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 225
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 226 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGTGG----PMRLYVGSLHFNITED 279
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+R+
Sbjct: 280 MLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRIG 339
Query: 291 MANER 295
ER
Sbjct: 340 HVTER 344
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
++DE L+VG+L M + L F G V+S +I+ ++ T +S G+GFV S
Sbjct: 3 GSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRAT 62
Query: 167 AKEAIRLFDGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
A++ + ++G+ + + ++N+ G R G L I+ G+L
Sbjct: 63 AEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDL------------SIFVGDLA 110
Query: 225 WGLTSQGLRDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVE 283
+T L++ F + P + AKV+ + TGRS+G+GFV F + A++ MNG+
Sbjct: 111 SDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCS 170
Query: 284 GRPLRLNMA 292
RP+R+ +A
Sbjct: 171 SRPMRIGVA 179
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P TEQ + A SD + ++VG+L +T + L E FA +V A+
Sbjct: 76 PNTEQPFRLNWATFSTGDRRTDAGSDLS--IFVGDLASDVTDALLQETFATRYPSVKGAK 133
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF--PEVPRG------- 194
+V D T RS+G+GFV G E A+ +G R +++ P+ G
Sbjct: 134 VVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSS 193
Query: 195 ------GERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
G A+ G Q S + I+ G L +T + LR +F ++S K+
Sbjct: 194 QALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIP 253
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKT 308
+G GFV F + AL +NG + + +RL+ PA+K+ +
Sbjct: 254 V------GKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRN------PASKQWRN 301
Query: 309 ENS 311
+++
Sbjct: 302 DSN 304
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++V L + + L E F+ G V ++ T R +G ++ E A
Sbjct: 141 DARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLA 200
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ L G ++ G + V + E+ MG + N + P ++Y G+L + +T
Sbjct: 201 LGL-SGQKLLGVPIIVQHTQ----AEKNRMGNSMPNLMPKNMTGPMRLYVGSLHFNITED 255
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++I + TGRS+G+GF+ F ED + AL+ +NG E+ GRP+++
Sbjct: 256 MLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVG 315
Query: 291 MANER 295
ER
Sbjct: 316 NVTER 320
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIIVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGHVTER 172
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELTGRPMKV 166
>gi|374721345|gb|AEZ68008.1| nucleolin [Chlorocebus aethiops]
Length = 712
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 484 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 539
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 540 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 586
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 587 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 643
Query: 289 LNMANER 295
L+ A +
Sbjct: 644 LDWAKPK 650
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 393 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 447
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 448 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 496
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 497 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 548
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 549 EIEGRAIRLELQGPRGSP 566
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 276 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 335
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 336 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 386
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS + A L T L++ F+ +A+
Sbjct: 387 -----------------DSKKERDARTL----LAKNLPYKVTQDELKEVFED-----AAE 420
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + + G E++GR + L E+
Sbjct: 421 IRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEK 469
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L + + L F + G V A+IV DRV+ RS+G G+V S + AI+L
Sbjct: 182 IFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDSVAPAIQLT 241
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
G ++ G + E + R A P+ +S H++Y GN+ + +T L++
Sbjct: 242 -GQKLLGIPIIAQLTEAEK--NRQARNPEA-SSGNNHAAPFHRLYVGNIHFSITESDLQN 297
Query: 235 AFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F+ P G L + + TGRSRG+GFV F + AL+ MNG ++ GR +R+ + N
Sbjct: 298 VFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGLGN 355
Query: 294 ERAPP 298
++ P
Sbjct: 356 DKFTP 360
>gi|297265320|ref|XP_001116949.2| PREDICTED: nucleolin-like [Macaca mulatta]
gi|75075722|sp|Q4R4J7.3|NUCL_MACFA RecName: Full=Nucleolin
gi|67967725|dbj|BAE00345.1| unnamed protein product [Macaca fascicularis]
gi|67971272|dbj|BAE01978.1| unnamed protein product [Macaca fascicularis]
Length = 711
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 483 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 538
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 539 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 585
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 586 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 642
Query: 289 LNMANER 295
L+ A +
Sbjct: 643 LDWAKPK 649
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 392 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 446
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 447 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 495
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 496 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 547
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 548 EIEGRAIRLELQGPRGSP 565
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 275 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 334
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 335 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 385
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 386 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 424
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 425 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 468
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 110 DEAAR--LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
DE R ++V L + + L F + G V A+IV DRV+ RS+G G+V + E
Sbjct: 173 DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESV 232
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
AI+L G ++ G + E + R A P+ +S H++Y GN+ + +
Sbjct: 233 APAIQL-TGQKLLGIPIIAQLTEAEK--NRQARNPEA-SSGSNHAAPFHRLYVGNIHFSI 288
Query: 228 TSQGLRDAFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
T L++ F+ P G L + + TGRSRG+GFV F + AL+ MNG ++ GR
Sbjct: 289 TESDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRA 346
Query: 287 LRLNMANERAPP 298
+R+ + N++ P
Sbjct: 347 IRVGLGNDKFTP 358
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIVVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELAGRPMKV 166
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 93 EEEEAVEEEEEPKVAA-----SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYD 147
EE E++ E K + +E A ++ G L +++ L F V SA ++ +
Sbjct: 230 EEAESINTPENKKAKSESFTTDEEPATIFAGRLSWNIDDDWLKREFEHLEGVISARVIME 289
Query: 148 RVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
R T +SRG+G+V S A+ AI G +I GR + ++ + G A +
Sbjct: 290 RATGKSRGYGYVDFSSKSAAENAIAEMQGKEIDGRPINLD---LSTGKPHATKSNNDRAR 346
Query: 208 YQGFVDSP--HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFE 265
G SP ++ GNL + L + F ++S ++ T + +GFG+V F
Sbjct: 347 QFGDQQSPPSDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFS 406
Query: 266 TAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ ++ ++AL+A+NG +EGRP RL+ + R
Sbjct: 407 SVDEAKAALEALNGEYLEGRPCRLDFSAPR 436
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A+ +A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V S +
Sbjct: 51 ANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDG 110
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ A+ + + I G+ ++ + + P L+ + QG ++ NL +
Sbjct: 111 ERALEELNYTLIKGKPCRIMW---------SQRDPALRKTGQG------NVFIKNLDGAI 155
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + + G S+G+GFV +ETAE SA+ ++NG+
Sbjct: 156 DNKALHDTFAAFGNILSCKVAQDEH-GNSKGYGFVHYETAEAANSAIKSVNGM 207
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G + S ++ D + S+G+GFV + E A AI+
Sbjct: 146 VFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETAEAANSAIKSV 204
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V +P+ + K + F + IY N+ T R
Sbjct: 205 NGMLLNEKKVFVGH-HIPKKDRMS----KFEEMKANFTN----IYVKNIDPEATDDEFRA 255
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + SA + ++ G+SRGFGFV + ED A++ +N + +G+ L + A +
Sbjct: 256 LFEKYGDITSASLAHDQ-EGKSRGFGFVNYIRHEDANKAVEELNNSDFKGQALYVGRAQK 314
Query: 295 R 295
+
Sbjct: 315 K 315
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
R+YVG++ Y + ++ + FA G + S ++ +D VT + +GF FV E A+ A+
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ +GGR +KV P G+ + +L + F ++IY ++ L+ +
Sbjct: 146 QMNSVMLGGRNIKVGRPS--NIGQAQPIIDQLAEEARAF----NRIYVASVHQDLSDDDI 199
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+ F+ + S + + TG+ +G+GF+ +E A+ Q A+ +MN ++ G+ LR+ A
Sbjct: 200 KSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 259
Query: 293 NERAPPVL---------PAAKETKT-ENSIDGSELLSSIST 323
P+L PAA T + ++ G+ +L ++ T
Sbjct: 260 VTPPMPLLTPATPGGLPPAATAKITAQEAVAGAAVLGTLGT 300
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 150 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 209
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 210 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGSSG----PMRLYVGSLHFNITED 263
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+R+
Sbjct: 264 MLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVG 323
Query: 291 MANER 295
ER
Sbjct: 324 QVTER 328
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGN+ ++T LAEVF AG +A +++ + +GFV A AI
Sbjct: 57 VYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASAALAIMTL 112
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
G Q+ G+ +KVN+ NS + I+ G+L +T L
Sbjct: 113 HGRQLYGQALKVNW--------------AYANSSREDTSGHFNIFVGDLSPEVTDATLFA 158
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F P A+V+++ TGRS+G+GFV+F +D QSA++ M G + R +R N A +
Sbjct: 159 CFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATK 218
Query: 295 RA 296
A
Sbjct: 219 GA 220
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L +T ++L F+ + + A +++D T RS+G+GFV+ ++A+ AI
Sbjct: 142 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDM 201
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFV---------------DSPHK-- 217
G +G R ++ N+ GG ++ K+ +S V D+P
Sbjct: 202 TGKWLGNRQIRCNWATKGAGG--SSNEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNP 259
Query: 218 ----IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
+Y GNL +T L F L A VI E R +GFGFV + T ++ A
Sbjct: 260 SYTTVYVGNLPHDVTQAELHCQFHA----LGAGVIEEVRVQRDKGFGFVRYNTHDEAALA 315
Query: 274 LDAMNGVEVEGRPLRLNMANERAPP 298
+ NG V G+ ++ + ++ PP
Sbjct: 316 IQMANGRLVRGKNMKCSWGSKPTPP 340
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 58/81 (71%)
Query: 212 VDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQ 271
D ++ + GNL W + +GL+DAF+ L+ AKV+ ++++GRSRGFGFVTF+ ++
Sbjct: 2 ADDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAME 61
Query: 272 SALDAMNGVEVEGRPLRLNMA 292
A++AMNGV+++GR + ++ A
Sbjct: 62 DAIEAMNGVDLDGRDITVDKA 82
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
+D+ R ++GNL +S + L + F + G + A++V D+ + RSRGFGFVT +
Sbjct: 2 ADDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAME 61
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRG 194
+AI +G + GR + V+ + +G
Sbjct: 62 DAIEAMNGVDLDGRDITVDKAQPDKG 87
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
+S +A LYVG L ++T + + E+F G VAS + D VT RS G+ +V + +
Sbjct: 40 SSAPSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADG 99
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ A+ + S I GR ++ + + P L+ + QG I+ NL +
Sbjct: 100 ERALEQLNYSLIKGRPCRIMW---------SQRDPALRKTGQG------NIFIKNLDEQI 144
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + GRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 145 DNKALHDTFVAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAVNGM 196
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL + + +L + F G V S ++ D RS+G+GFV + E A+ AI+
Sbjct: 135 IFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAV 193
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V P +PR ER + KL F + +Y NL +T + +
Sbjct: 194 NGMLLNDKKVYVG-PHIPRK-ERQS---KLDEMKAQFTN----LYIKNLDTEVTQEEFEE 244
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F + SA V + GRS+GFGFV +E+ E+ Q+A+D ++ +++G+ L + A +
Sbjct: 245 LFNRYGSVTSAIVQVDD-EGRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQK 303
Query: 295 RA 296
+A
Sbjct: 304 KA 305
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LY+ NL +T E+F G+V SA + D RS+GFGFV S EEA+ A+
Sbjct: 228 LYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDD-EGRSKGFGFVNYESHEEAQAAVDNL 286
Query: 175 DGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
+ + G+ + V E+ R E+A M KL + YQG +Y NL
Sbjct: 287 HDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKME-KL-SKYQGV-----NLYVKNLEDD 339
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ LR F+ + S KV+ + G S+GFGFV F + ++ A+ MN + +P
Sbjct: 340 VDDDKLRAEFEPFGTITSCKVMSDE-KGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKP 398
Query: 287 LRLNMANER 295
L +++A R
Sbjct: 399 LYVSLAQRR 407
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 88 EQEEEEEEEAVEEEEEPKV--AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIV 145
+++ E EEE E+ K+ + + LYV NL + L F GT+ S +++
Sbjct: 302 QKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVDDDKLRAEFEPFGTITSCKVM 361
Query: 146 YDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D S+GFGFV S +EA +AI + IG + + V+
Sbjct: 362 SDE-KGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSL 403
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIIVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKVGHVTER 172
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELTGRPMKV 166
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++V L + + L E F+ G V ++ T R +G ++ E A
Sbjct: 162 DARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLA 221
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
+ L G ++ G + V + E+ MG + N + P ++Y G+L + +T
Sbjct: 222 LGL-SGQKLLGVPIIVQHTQ----AEKNRMGNSMPNLMPKNMTGPMRLYVGSLHFNITED 276
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++I + TGRS+G+GF+ F ED + AL+ +NG E+ GRP+++
Sbjct: 277 MLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVG 336
Query: 291 MANER 295
ER
Sbjct: 337 NVTER 341
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A + E +Y+ N M L E+F + G S +++ D T +SRGFGF++ E+
Sbjct: 185 AKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTD-PTGKSRGFGFISYEKHED 243
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAA--------MGPKLQNSYQGFVDSPHKI 218
A +A+ +G+++ G+TV V + ER A + + + YQG +
Sbjct: 244 ANKAVEDMNGTELNGKTVFVG--RAQKKMERQAELKRKFEMLKQERISRYQGV-----NL 296
Query: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Y NL + + LR F + SAKV+ E GRS+GFGFV F + E+ A+ MN
Sbjct: 297 YIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 279 GVEVEGRPLRLNMANER 295
G V +PL + +A +
Sbjct: 355 GRIVGSKPLYVALAQRK 371
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+ FV + + A AI
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + R V V R R +L + F + +Y N G + + L++
Sbjct: 159 NGMLLNDRKVFVG-----RFKSRKEREAELGAKAKEFTN----VYIKNFGDDMNDERLKE 209
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS KV+ + TG+SRGFGF+++E ED A++ MNG E+ G+ + + A +
Sbjct: 210 LFDKYGKTLSVKVMTDP-TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQK 268
Query: 295 R 295
+
Sbjct: 269 K 269
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 113 ARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIR 172
A LYVG+L +T + L E F+ AG V S + D +T RS G+ +V +A+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 173 LFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
+ + G+ +++ + + P L+ S G ++ NL + ++ L
Sbjct: 71 TMNFDVVKGKPIRIMWSQ---------RDPSLRKSGVG------NVFIKNLDKSIDNKAL 115
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
D F +LS KV+ + S+G+ FV FET + A++ MNG+ + R
Sbjct: 116 YDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDR 166
>gi|296205845|ref|XP_002749930.1| PREDICTED: uncharacterized protein LOC100395223 isoform 1
[Callithrix jacchus]
Length = 713
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 485 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 540
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 541 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEDTT 587
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 588 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 644
Query: 289 LNMA 292
L+ A
Sbjct: 645 LDWA 648
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 394 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLFSKDGKSKGIAYIEFKTEADAEKT 448
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDSP-----HKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 449 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 497
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 498 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 549
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 550 EIEGRAIRLELQGPRGSP 567
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 45/209 (21%)
Query: 89 QEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAEAGTVASA 142
++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 284 KKEMTKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLA--- 340
Query: 143 EIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG----ERA 198
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G ER
Sbjct: 341 --VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGKDSKKERD 394
Query: 199 AMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258
A + A NL + +T L++ F+ +A++ G+S+G
Sbjct: 395 A----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLFSKDGKSKG 433
Query: 259 FGFVTFETAEDLQSALDAMNGVEVEGRPL 287
++ F+T D + + G E +
Sbjct: 434 IAYIEFKTEADAEKTFEEKQGTE-----I 457
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 108 ASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEA 167
A +A LYVG L S+T + L E+F+ G VAS + D VT RS G+ +V + +
Sbjct: 49 AQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 108
Query: 168 KEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL 227
+ A+ + + I GR ++ + + P L+ + QG ++ NL +
Sbjct: 109 ERALEDLNYTLIKGRPCRIMWSQ---------RDPALRKTGQG------NVFIKNLDTAI 153
Query: 228 TSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
++ L D F +LS KV + + G S+G+GFV +ETAE Q+A+ +NG+
Sbjct: 154 DNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAAQNAIKHVNGM 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G + S ++ D + S+G+GFV + E A+ AI+
Sbjct: 144 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHV 202
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V G A + Q+ ++ + +Y N+ T + R+
Sbjct: 203 NGMLLNDKKVFV--------GHHIAKKDR-QSKFEEMKANFTNVYVKNIDQDTTDEEFRE 253
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ + SA + + +G+SRGFGFV F + E +A+D +N + + + L + A +
Sbjct: 254 LFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVDNLNEKDFKSQKLYVGRAQK 313
Query: 295 R 295
+
Sbjct: 314 K 314
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 63/239 (26%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI--- 171
+YV N+ T E+F + G + SA + D + +SRGFGFV S E A A+
Sbjct: 237 VYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVDNL 296
Query: 172 --RLFDGSQIG-GRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
+ F ++ GR K + E + A + + YQG +Y NL +
Sbjct: 297 NEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGV-----NLYIKNLSDDID 351
Query: 229 SQGLRDAFQGQPGLLSAKVIFE-------------------------------------- 250
+ LRD F G + SAKV+ +
Sbjct: 352 DEKLRDLFSGYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPPEESKDEAAEKAETK 411
Query: 251 --------------RYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+GFGFV F + ++ A+ MN V G+PL + +A +
Sbjct: 412 DTKEAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRK 470
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 215 PHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
PH +Y G L +T L + F + S +V + T RS G+ +V + D +
Sbjct: 51 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 110
Query: 273 ALDAMNGVEVEGRPLRLNMANERAP 297
AL+ +N ++GRP R+ M ++R P
Sbjct: 111 ALEDLNYTLIKGRPCRI-MWSQRDP 134
>gi|255945691|ref|XP_002563613.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588348|emb|CAP86453.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 356
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVGNL + +T+ L + F + G V +A IV+D S+GFG+VT +VEEA +AI
Sbjct: 123 LYVGNLFFDVTAEDLRKHFEKYGAVENALIVHD-ARGLSKGFGYVTFSTVEEATQAITQQ 181
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS-PHK-IYAGNLGWGLTSQGL 232
G + GR V V F +Y+ ++ P K +Y GNL + LT Q L
Sbjct: 182 HGGILEGREVVVQFS---------------NTTYRAMAENKPSKTLYIGNLPYELTDQDL 226
Query: 233 RDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMA 292
+D G+ ++ +R TG RGF + F + + ++ E GR L +N A
Sbjct: 227 QDLIADLHGVTDVRIPVDRRTGLPRGFAHIDFLEQSNATHGKELLSRKEPYGRKLFVNFA 286
Query: 293 NERA 296
+
Sbjct: 287 RRKV 290
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
+A + + LY+GNLPY +T L ++ A+ V I DR T RGF +
Sbjct: 203 MAENKPSKTLYIGNLPYELTDQDLQDLIADLHGVTDVRIPVDRRTGLPRGFAHIDFLEQS 262
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQ 209
A L + GR + VNF R + P+ YQ
Sbjct: 263 NATHGKELLSRKEPYGRKLFVNF------ARRKVLSPEDFQRYQ 300
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIIVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELAGRPMKV 166
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 91 EEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVT 150
EE E +++ + + A D L+VGNL +++ L F G + ++ DR T
Sbjct: 226 EEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRET 285
Query: 151 DRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFP---EVPRGGERAAMGPKLQNS 207
R++GFG+V +A +A + ++ GR + V+F + P RA N
Sbjct: 286 GRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARA-------NK 338
Query: 208 YQGFVDSP-HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFET 266
+ +P + ++ GNL + T++ +++ F + + +R +G +GFG+V F +
Sbjct: 339 FGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGS 398
Query: 267 AEDLQSALDAMNGVEVEGRPLRLNMANER 295
E+ +AL+A+ G +V GRPLR++ A R
Sbjct: 399 QEEATAALEALQGQDVAGRPLRVDFAAPR 427
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
D ++ GNL W + LR F+ ++ +VI +R TGR++GFG+V F A D
Sbjct: 245 DGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAK 304
Query: 273 ALDAMNGVEVEGRPLRLNMANERAPP 298
A M+ E++GRPL ++ + R P
Sbjct: 305 AQKDMHEYELDGRPLNVDFSTPRQKP 330
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 20/224 (8%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEI 144
P+ +++ EEE E V ++ + V +A L+VGNL +++ L F E G ++ I
Sbjct: 211 PQKKRKAEEEAEPVAKKAKVDVPEG-ASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRI 269
Query: 145 VYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF-------PEVPRGGER 197
V DR + RSRGFG+V +VE+A +A +++ GR + +++ PR ER
Sbjct: 270 VTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPR--ER 327
Query: 198 AAMGPKLQNSYQGFVD--SPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYT 253
A N + F D SP ++ GN+ + +++ F + ++ + +
Sbjct: 328 A------DNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDS 381
Query: 254 GRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
GR +GFG+V F + ++ ++AL+A +G ++ GR +RL+ + + P
Sbjct: 382 GRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPKQP 425
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
+ YVG +PY T + F GT+ + + T + RG +T + AK A+ L
Sbjct: 167 KAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALAL 226
Query: 174 FDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
DG+ +GG +K+ + R + + P++ Y ++IY GNL W +T + LR
Sbjct: 227 -DGADMGGLFLKIQPYKATRANKASDFAPEILEGY-------NRIYVGNLSWDITEEELR 278
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F G + S + ++ TG RG+ V F ++ L++AL A++ + GRP+R++ A
Sbjct: 279 KFFNGCE-ITSLRFGMDKETGEFRGYAHVDFSDSQSLKTAL-ALDQNVLFGRPVRISCA- 335
Query: 294 ERAPPVLPAAKETKTENS 311
+P K+T T S
Sbjct: 336 ------VPLKKKTGTHTS 347
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
++AGNL W + L +AF+ GL+ A+V+ +R GRSRGFG+V FET E A +AM
Sbjct: 262 LFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKAYEAM 321
Query: 278 NGVEVEGRPLRLNMANER 295
G E++GRPL L+ AN R
Sbjct: 322 QGFELDGRPLNLDYANTR 339
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 84 EPETEQEEEEEEEAVEEEEE----PKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTV 139
E +T+ E+ + + +EE PK A ++ A L+ GNL +++ ++LAE F E +
Sbjct: 227 ESKTKTEDASASKKRKADEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKEFEGL 286
Query: 140 ASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEV------PR 193
A +V DR RSRGFG+V + E A +A G ++ GR + +++ PR
Sbjct: 287 VGARVVTDRDGGRSRGFGYVDFETPEAATKAYEAMQGFELDGRPLNLDYANTRPAESNPR 346
Query: 194 GGERAAMGPKLQNSYQGFVDSPHK--IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
+RA K G SP ++ GNL + + +R F + S ++ +
Sbjct: 347 --DRATDRAK----KHGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLPTDP 400
Query: 252 YTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG----RPLRLNMANER 295
+G +GFG+V+F + ED ++ +NG + R +RL+ A+ R
Sbjct: 401 DSGNLKGFGYVSFNSVEDAKTVFQQLNGASLGNGRMSRSVRLDFASSR 448
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+V ++ A LY+GNL + L E+F + G V + + D++T +G+GFV +
Sbjct: 21 QVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNE 80
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A A++L + ++ G+ +++N K + F D ++ GNL
Sbjct: 81 VDADYALKLMNMVKLYGKALRLN---------------KSAQDRRNF-DVGANVFLGNLD 124
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + D F ++SAK++ + TG SRGFGFV+F+T E +AL AMNG +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICN 184
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 185 RPIHVSYAYKK 195
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+V ++ A LY+GNL + L E+F + G V + + D++T +G+GFV +
Sbjct: 21 QVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNE 80
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A A++L + ++ G+ +++N K + F D ++ GNL
Sbjct: 81 VDADYALKLMNMVKLYGKALRLN---------------KSAQDRRNF-DVGANVFLGNLD 124
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + D F ++SAK++ + TG SRGFGFV+F+T E +AL AMNG +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICN 184
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 185 RPIHVSYAYKK 195
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
LYVG+L ++T S L ++F + G V S + D T RS G+G+V + ++A A+ +
Sbjct: 36 LYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVL 95
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+ + + R +++ + + P ++ S QG I+ NL + + L D
Sbjct: 96 NFTPLNNRPIRIMY---------SHRDPSIRKSGQG------NIFIKNLDKAIDHKALHD 140
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
F +LS KV + +G+S+G+GFV F+T E Q A++ +NG+
Sbjct: 141 TFSSFGNILSCKVAVDG-SGQSKGYGFVQFDTEEAAQKAIEKLNGM 185
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V NL S T L + F E GT+ SA ++ D +S+ FGFV S ++A A+
Sbjct: 215 VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDG-DGKSKCFGFVNFESTDDAARAVEAL 273
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAA-MGPKLQNSYQGFVDSPH--KIYAGNLGWGLTSQG 231
+G +I + V + + ER + K + S + D +Y NL + +
Sbjct: 274 NGKKIDDKEWYVG--KAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEK 331
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
L++ F + S KV+ + G SRG GFV F T E+ AL MNG V +PL + +
Sbjct: 332 LKELFSSYGTITSCKVMRDP-NGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTL 390
Query: 292 ANER 295
A +
Sbjct: 391 AQRK 394
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 101 EEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVT 160
+P + S + +++ NL ++ +L + F+ G + S ++ D + +S+G+GFV
Sbjct: 111 HRDPSIRKSGQG-NIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDG-SGQSKGYGFVQ 168
Query: 161 MGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYA 220
+ E A++AI +G + + V V R ER + G + + + ++
Sbjct: 169 FDTEEAAQKAIEKLNGMLLNDKQVYVG--PFLRKQERESTGDRAKF---------NNVFV 217
Query: 221 GNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
NL T L+ F G+ G +++ V+ G+S+ FGFV FE+ +D A++A+NG
Sbjct: 218 KNLSESTTDDELKKTF-GEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGK 276
Query: 281 EVEGRPLRLNMANERA 296
+++ + + A +++
Sbjct: 277 KIDDKEWYVGKAQKKS 292
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L D F ++S +V + T RS G+G+V + +D ALD +
Sbjct: 36 LYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVL 95
Query: 278 NGVEVEGRPLRLNMANERAPPV 299
N + RP+R+ M + R P +
Sbjct: 96 NFTPLNNRPIRI-MYSHRDPSI 116
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 88 EQEEEEEEEAVEEEEEPKVAASD-EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVY 146
++ E E E ++ E+ K AA + A LYV NL S+ L E+F+ GT+ S +++
Sbjct: 290 KKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMR 349
Query: 147 DRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
D SRG GFV + EEA A+ +G + + + V
Sbjct: 350 DP-NGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTL 390
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YVGNLP+ + + L ++F+E G V A +VYDR T RSRGFGFVTM V+E EAI
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 175 DGSQIGGRTVKVNFPE 190
DG + GR ++VN E
Sbjct: 61 DGQNLEGRAIRVNGAE 76
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y GNL W + + L F ++ A+V+++R TGRSRGFGFVT ++L A+ A+
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 278 NGVEVEGRPLRLNMANERAP 297
+G +EGR +R+N A ER P
Sbjct: 61 DGQNLEGRAIRVNGAEERPP 80
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++VG+L Y M + L F +G V + +++ +R + S G+GF+ + A++A++ F
Sbjct: 106 IWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQNF 165
Query: 175 DGSQIGG--RTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGL 232
G + R K+N+ G +R+ + S H I+ G+L +T L
Sbjct: 166 SGHVMPNTDRAFKLNWASYSMGEKRSE------------ISSDHSIFVGDLAVDVTDAML 213
Query: 233 RDAFQGQ-PGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNM 291
+ F + + AKVI + TGRSRG+GFV F D A+ MNGV RP+R+
Sbjct: 214 LELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGP 273
Query: 292 ANER 295
A R
Sbjct: 274 ATPR 277
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 85 PETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFA-EAGTVASAE 143
P T++ + + E+ +SD + ++VG+L +T + L E+F+ + +V A+
Sbjct: 171 PNTDRAFKLNWASYSMGEKRSEISSDHS--IFVGDLAVDVTDAMLLELFSNKYRSVKGAK 228
Query: 144 IVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPR--GGERAAMG 201
++ D T RSRG+GFV G + A+ +G R ++V P PR G+
Sbjct: 229 VIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVG-PATPRRSQGDSGTSP 287
Query: 202 PKLQNSYQGFVDSPHK-IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFG 260
P+ Q VDS ++ +Y G L ++ LR AF L S K+ F + G
Sbjct: 288 PR-----QSHVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCG------ 336
Query: 261 FVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAPPVLPAAKETKTE 309
FV F D + AL +NG + + +RL+ PA+K+++ +
Sbjct: 337 FVQFVNRVDAEEALHGLNGSTIGKQAVRLSWGRS------PASKQSRGD 379
>gi|222837999|gb|EEE76364.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 15/132 (11%)
Query: 133 FAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVP 192
F+E G V SA+++ +R T RS+GFGFV MGS EA+ AI+ G GGR + VN
Sbjct: 1 FSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVN----- 55
Query: 193 RGGERAAMGPK--LQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFE 250
E M P+ L+ G +K+Y GNL +G+ L AF + SA+V+ E
Sbjct: 56 ---EARPMEPRAPLEEFLMG-----NKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMME 107
Query: 251 RYTGRSRGFGFV 262
R TGRS+GFGFV
Sbjct: 108 RDTGRSKGFGFV 119
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTM 161
+LYVGNLPY + + L + F++ G V SA ++ +R T RS+GFGFV M
Sbjct: 74 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEM 121
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 244 SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297
SAKV+ ER TGRS+GFGFV + + Q+A+ ++G GR L +N A P
Sbjct: 9 SAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARPMEP 62
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+E E A + E +Y+ N M L E+F + G S +++ D T +SRGFGF
Sbjct: 178 KEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTD-PTGKSRGFGF 236
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFV 212
V+ E+A +A+ +G+++ G+TV V + + R E +L+ + YQG
Sbjct: 237 VSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGV- 295
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
+Y NL + + LR F + SAKV+ E GRS+GFGFV F + E+
Sbjct: 296 ----NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATK 349
Query: 273 ALDAMNGVEVEGRPLRLNMANER 295
A+ MNG V +PL + +A +
Sbjct: 350 AVTEMNGRIVGSKPLYVALAQRK 372
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L + F+ G + S ++V D + S+G+ FV + + A AI
Sbjct: 102 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 159
Query: 175 DGSQIGGRTVKV-NFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLR 233
+G + R V V F R A MG K + F + +Y N G + Q L+
Sbjct: 160 NGMLLNDRKVFVGRFKS--RKEREAEMGAKAKE----FTN----VYIKNFGDDMDDQRLK 209
Query: 234 DAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
+ F LS KV+ + TG+SRGFGFV++E ED A++ MNG E+ G+ + + A
Sbjct: 210 ELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQ 268
Query: 294 ER 295
++
Sbjct: 269 KK 270
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A S A LYVG+L +T + L E F+ AG V S + D +T RS G+ +V +
Sbjct: 6 AGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 65
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A+ A+ + + G+ +++ + + P L+ S G ++ NL
Sbjct: 66 AERALDTMNFDVVKGKPIRIMWSQ---------RDPSLRKSGVG------NVFIKNLDKS 110
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ ++ L D F +LS KV+ + S+G+ FV FET + A++ MNG+ + R
Sbjct: 111 IDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMNGMLLNDR 167
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L + F +LS +V + T RS G+ +V F+ D + ALD M
Sbjct: 14 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 73
Query: 278 NGVEVEGRPLRLNMANERAP 297
N V+G+P+R+ M ++R P
Sbjct: 74 NFDVVKGKPIRI-MWSQRDP 92
>gi|417404108|gb|JAA48828.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 713
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A ++ A+ +S+G+ F+ S E+AK
Sbjct: 485 SGESKTLVLSNLSYSATEETLQEVFEKATSIKVAQ----NQNGKSKGYAFIEFASFEDAK 540
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 541 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQPS------------KTLFVKGLSEETT 587
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 588 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 644
Query: 289 LNMANER 295
L+ A +
Sbjct: 645 LDWAKPK 651
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 102 EEPKVAAS--DEAAR-LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
E+PK S D AR L NLPY +T L EVF +A EI +S+G +
Sbjct: 382 EKPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVFEDA-----MEIRLVSKDGKSKGIAY 436
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDS---- 214
+ + +A++ + G++I GR++ + + GE+ Y+G +S
Sbjct: 437 IEFKTEADAEKTLEEKQGTEIDGRSISLYYT-----GEKGQ-----SQDYRGGKNSTWSG 486
Query: 215 -PHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSA 273
+ NL + T + L++ F+ + A + G+S+G+ F+ F + ED + A
Sbjct: 487 ESKTLVLSNLSYSATEETLQEVFEKATSIKVA----QNQNGKSKGYAFIEFASFEDAKEA 542
Query: 274 LDAMNGVEVEGRPLRLNMANERAPP 298
L++ N E+EGR +RL + R P
Sbjct: 543 LNSCNKREIEGRAIRLELQGPRGSP 567
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTSSSL----AEVFAE 135
++ P ++E +++A E ++ KV A++ A L++GNL +S ++S L ++VFA+
Sbjct: 277 KEAPGKRKKEMAKQKAAPEAKKQKVEATEPTTAFNLFIGNLNFSKSASELKTGISDVFAK 336
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D SR FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 337 NDLA-----VVDVRIGMSRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 387
Query: 196 ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGL---------TSQGLRDAFQGQPGLLSAK 246
DS A L T L++ F+ + +
Sbjct: 388 -----------------DSKKDRDARTL----LAKNLPYKVTQDELKEVFED-----AME 421
Query: 247 VIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ G+S+G ++ F+T D + L+ G E++GR + L E+
Sbjct: 422 IRLVSKDGKSKGIAYIEFKTEADAEKTLEEKQGTEIDGRSISLYYTGEK 470
>gi|402889647|ref|XP_003908120.1| PREDICTED: nucleolin isoform 3 [Papio anubis]
Length = 634
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 109 SDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAK 168
S E+ L + NL YS T +L EVF +A + V +S+G+ F+ S E+AK
Sbjct: 406 SGESKTLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAK 461
Query: 169 EAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLT 228
EA+ + +I GR +++ + PRG A P ++ L T
Sbjct: 462 EALNSCNKREIEGRAIRLEL-QGPRGSPNARSQP------------SKTLFVKGLSEDTT 508
Query: 229 SQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLR 288
+ L+++F G + A+++ +R TG S+GFGFV F + ED ++A +AM E++G +
Sbjct: 509 EETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 565
Query: 289 LNMA 292
L+ A
Sbjct: 566 LDWA 569
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A L NLPY +T L EVF +A AEI +S+G ++ + +A++
Sbjct: 315 DARTLLAKNLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKT 369
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQN-SYQGFVDS-----PHKIYAGNLG 224
G++I GR++ + + G K QN Y+G +S + NL
Sbjct: 370 FEEKQGTEIDGRSISLYY-----------TGEKGQNQDYRGGKNSTWSGESKTLVLSNLS 418
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIF----ERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
+ T + L++ F+ K F + G+S+G+ F+ F + ED + AL++ N
Sbjct: 419 YSATEETLQEVFE--------KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 470
Query: 281 EVEGRPLRLNMANERAPP 298
E+EGR +RL + R P
Sbjct: 471 EIEGRAIRLELQGPRGSP 488
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 82 QDEPETEQEEEEEEEAVEEEEEPKVAASD--EAARLYVGNLPYSMTS----SSLAEVFAE 135
++ P ++E +++A E ++ KV ++ A L+VGNL ++ ++ + +++VFA+
Sbjct: 198 KEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAK 257
Query: 136 AGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGG 195
V D +R FG+V S E+ ++A+ L G ++ G +K+ E P+G
Sbjct: 258 NDLA-----VVDVRIGMTRKFGYVDFESAEDLEKALEL-TGLKVFGNEIKL---EKPKGK 308
Query: 196 ----ERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFER 251
ER A + A NL + +T L++ F+ +A++
Sbjct: 309 DSKKERDA----------------RTLLAKNLPYKVTQDELKEVFED-----AAEIRLVS 347
Query: 252 YTGRSRGFGFVTF---ETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
G+S+G ++ F AE + G E++GR + L E+
Sbjct: 348 KDGKSKGIAYIEFKTEADAE---KTFEEKQGTEIDGRSISLYYTGEK 391
>gi|115398367|ref|XP_001214775.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192966|gb|EAU34666.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
L+V +LP S T+ SL E F+++ + A V D T +S+G+GFVT V++AK A+ +
Sbjct: 22 LFVRSLPASTTTESLTEYFSQSYVIKHALAVLDPETKKSKGYGFVTFADVDDAKAALEEY 81
Query: 175 DGSQIGGRTVKVNFPEVPRG-------GERA----AMGPKLQNSYQGFVDSPHKIYAGNL 223
+GS G+ +KV++ + PR G+ A+ K Q Q P K+ NL
Sbjct: 82 NGSVFEGKKIKVDYAQ-PRHRTIDESLGKSVPSSEALERKKQREQQRAAAQPPKLIVRNL 140
Query: 224 GWGLTS-QGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEV 282
W + L F+ + A + G+ GFGFV ++ + AL A+NG EV
Sbjct: 141 PWSIKEPDDLAVLFRSFGKVKQA--TLPKKGGQLAGFGFVILRGKKNAEKALAAVNGKEV 198
Query: 283 EGRPLRLNMANER 295
+GR L ++ A E+
Sbjct: 199 DGRTLAVDWAVEK 211
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
AA +++ NLP++ L E F + G + A IV D T+R RG GFV E+A +
Sbjct: 287 AATVFIRNLPFTCDDEMLYEHFTQFGNLRYARIVVDHETERPRGTGFVCFWKAEDAAACV 346
Query: 172 R 172
R
Sbjct: 347 R 347
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIIVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELAGRPMKV 166
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%), Gaps = 19/191 (9%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL ++ L E+F +AG V + + DRVT++ +G+GFV S E+
Sbjct: 19 AERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKVLNMIKLYGKPIRVN---------KASQDKKS-------LDVGANLFIGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLL--SAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + L D F G++ + K++ + TG SRGFGF+++++ E SA++AMNG +
Sbjct: 123 VDEKLLYDTFSAF-GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCN 181
Query: 285 RPLRLNMANER 295
R + ++ A ++
Sbjct: 182 RQITVSYAYKK 192
>gi|294933824|ref|XP_002780863.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
gi|239890990|gb|EER12658.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
Length = 381
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 96 EAVEEEEEPKVAAS-------DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDR 148
+A E+ P ++ D+ +L+VG +P T F++ G V + ++ D+
Sbjct: 49 KATEQGNTPSFSSGGHGDRGFDDRRQLFVGGIPEGFTDDDFHRYFSQFGNVERSIVMTDK 108
Query: 149 VTDRSRGFGFVTMGSVEEAKEAIRLFDG-SQIGGRTVKVNFPEVPRGGERAAMGPKLQNS 207
+T R RGFGFVT + E + L +G Q+ G+ V VN + P+ + G
Sbjct: 109 MTGRCRGFGFVTYATTGEVENC--LANGPHQLNGKHVDVNRSQDPKDAHKGGWGSDRSGG 166
Query: 208 YQGFV---DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTF 264
D P K++ G L ++ LR F ++ + +R TGRS+G+GFVTF
Sbjct: 167 PSRRGGGGDDPKKVFCGGLPQDCDTERLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTF 226
Query: 265 ETAEDLQSALDAMNGVEVEGRPLRL 289
++ + + +A++ N ++GR + +
Sbjct: 227 DSEDAVNAAINGDN--TIDGRWVEV 249
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 132 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 191
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L + +T
Sbjct: 192 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGSSG----PMRLYVGSLHFNITED 245
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + + ++ + TGRS+G+GF+TF +E + AL+ +NG E+ GRP+R+
Sbjct: 246 MLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVG 305
Query: 291 MANER 295
ER
Sbjct: 306 QVTER 310
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+A LYVG L +++ + L E+F G VAS + D VT RS G+ +V + + + A+
Sbjct: 48 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQG 231
+ S I GR ++ + + P L+ + QG I+ NL + ++
Sbjct: 108 EQLNYSLIKGRACRIMW---------SQRDPALRKTGQG------NIFIKNLDEAIDNKA 152
Query: 232 LRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGV 280
L D F +LS KV + GRS+G+GFV +ETAE ++A+ A+NG+
Sbjct: 153 LHDTFAAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAVNGM 200
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL ++ + +L + FA G V S ++ D RS+G+GFV + E A+ AI+
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAV 197
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
+G + + V V + ER + KL F + IY NL ++ +
Sbjct: 198 NGMLLNDKKVYVGHHISKK--ERQS---KLDEIRAQFTN----IYVKNLDPEVSLEEFTQ 248
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F+ Q G +++ VI G S+GFGFV FE E+ Q+A+D ++ E GR L ++ A +
Sbjct: 249 LFE-QFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQK 307
Query: 295 RA 296
+A
Sbjct: 308 KA 309
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+YV NL ++ ++F + G V SA I D + S+GFGFV EEA+ A+
Sbjct: 232 IYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGN-SKGFGFVNFEFHEEAQNAVDGL 290
Query: 175 DGSQIGGRTVKVNFP--------EVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
++ GR + V+ E+ + E A M + + YQG +Y NL
Sbjct: 291 HDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKM--EKMSKYQGV-----NLYIKNLDDE 343
Query: 227 LTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRP 286
+ + LR F+ + SAKV+ + G S+GFGFV F + ++ A+ MN + +P
Sbjct: 344 IDDERLRAEFEPFGTITSAKVMRDE-KGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKP 402
Query: 287 LRLNMANER 295
L +++A R
Sbjct: 403 LYVSLAQRR 411
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Query: 57 LSLLSLSYFRQFSASFDGFQVTEDSQDE---PETEQEEEEEEEAVEEEEEPKV--AASDE 111
++ + + + DG TE + + +++ E EEE + E K+ + +
Sbjct: 272 FGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQ 331
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
LY+ NL + L F GT+ SA+++ D S+GFGFV S +EA +A+
Sbjct: 332 GVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRDE-KGSSKGFGFVCFSSPDEATKAV 390
Query: 172 RLFDGSQIGGRTVKVNF 188
+ IG + + V+
Sbjct: 391 AEMNNKMIGAKPLYVSL 407
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
+ E E + AS E +Y+ N M L +VF++ G S +++ D + +S+GFGF
Sbjct: 177 DREAELRSKAS-EFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGF 234
Query: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPE--VPRGGERAAMGPKLQ----NSYQGFV 212
V+ S E AK+A+ +G I G+ + V + V R E M +L+ YQG
Sbjct: 235 VSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGV- 293
Query: 213 DSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQS 272
K+Y NL + + LR+ F ++ KV+ + G+S+GFGF+ F + ED
Sbjct: 294 ----KLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVM--QQEGQSKGFGFICFSSLEDATK 347
Query: 273 ALDAMNGVEVEGRPLRLNMA 292
A+ MNG + +P+ + +A
Sbjct: 348 AMIEMNGCFLGSKPISIALA 367
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
+++ NL S+ + +L E F+ G + S++++ D S+G+ FV + A AI
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSD--DQGSKGYAFVHFQNQSAADRAI--- 154
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
++ G+ +K V R R +L++ F + IY N G + + L+D
Sbjct: 155 --EEMNGKLLKSCKVFVGRFKNRKDREAELRSKASEFTN----IYIKNFGGDMDDERLKD 208
Query: 235 AFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANE 294
F LS KV+ + +G+S+GFGFV+F++ E + A++ MNG ++ G+ + + A +
Sbjct: 209 VFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQK 267
Query: 295 RA 296
+
Sbjct: 268 KV 269
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 106 VAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVE 165
VAA A LYVG+L +T L F+ AG V S I D+VT RS G+ +V +
Sbjct: 3 VAAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLT 62
Query: 166 EAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGW 225
+A++A+ + I G+++++ + + R+ +G ++ NL
Sbjct: 63 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGN---------------VFIKNLDK 107
Query: 226 GLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNG 279
+ ++ L + F G +LS+KV+ + S+G+ FV F+ A++ MNG
Sbjct: 108 SIDNKTLYEHFSGFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNG 159
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 218 IYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAM 277
+Y G+L +T L F +LS ++ ++ T RS G+ +V F D Q ALD M
Sbjct: 12 LYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDTM 71
Query: 278 NGVEVEGRPLRLNMANER 295
N ++G+ +RL M ++R
Sbjct: 72 NFDIIKGKSIRL-MWSQR 88
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 17/190 (8%)
Query: 107 AASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEE 166
A ++ A YVGNL +T L E+F +AG V + + DRVT+ +G+GFV S E+
Sbjct: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
Query: 167 AKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWG 226
A AI++ + ++ G+ ++VN +A+ K +D ++ GNL
Sbjct: 79 ADYAIKVLNMIKLYGKPIRVN---------KASQDKKS-------LDVGANLFVGNLDPD 122
Query: 227 LTSQGLRDAFQGQPGLLS-AKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGR 285
+ + L D F +++ K++ + TG SRGFGFV++++ E +A++AMNG + R
Sbjct: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNR 182
Query: 286 PLRLNMANER 295
+ ++ A ++
Sbjct: 183 QITVSYAYKK 192
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 77 VTEDSQDEPETEQEEEEEEEAVEEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEA 136
+T+ + ++ E ++++++A E V S +A LYVG+L S++ + L ++F+
Sbjct: 4 ITDKTAEQLENLNIQDDQKQAATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPI 61
Query: 137 GTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGE 196
G+V+S + D +T S G+ +V E ++AI + + I GR ++ + +
Sbjct: 62 GSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQ------ 115
Query: 197 RAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRS 256
P L+ G I+ NL + ++ L D F +LS+K+ + G+S
Sbjct: 116 ---RDPSLRKKGSG------NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKS 165
Query: 257 RGFGFVTFETAEDLQSALDAMNGVEVEGRPL 287
+GFGFV FE + A+DA+NG+ + G+ +
Sbjct: 166 KGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 196
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 112 AARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAI 171
+ +++ NL + + +L + F+ G + S++I D +S+GFGFV AKEAI
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAI 183
Query: 172 RLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
+G + G+ + V P + R ER + + + Y H++
Sbjct: 184 DALNGMLLNGQEIYV-APHLSR-KERDSQLEETKAHYTNLYVKTHQL 228
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 111 EAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEA 170
+A ++ L + L + F+ G V I+ DR + RS+G +V ++ A
Sbjct: 167 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 226
Query: 171 IRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQ 230
I L G ++ G + V + + AAM LQ G P ++Y G+L +T +
Sbjct: 227 IGL-TGQRLLGVPIIVQASQAEKN-RLAAMANNLQKGSGG----PMRLYVGSLHCNITKE 280
Query: 231 GLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLN 290
LR F+ + S ++ ++ TG+S+G+GF+TF AE + AL+ +NG E+ GRP+R+
Sbjct: 281 MLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRVG 340
Query: 291 MANER 295
ER
Sbjct: 341 QVTER 345
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
Length = 90
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
++YVGNL YS T L ++FA+ GTV SA +V DR T RSRGFGFV MGS EEA +AI
Sbjct: 4 KIYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAIEA 63
Query: 174 FDGSQIGGRTVKVN 187
+G+ GR++ VN
Sbjct: 64 LNGTDFQGRSLVVN 77
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 216 HKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALD 275
KIY GNL + T Q L+D F + SA V+ +RYTGRSRGFGFV + E+ A++
Sbjct: 3 QKIYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAIE 62
Query: 276 AMNGVEVEGRPLRLNMANERAPPVLP 301
A+NG + +GR L +N A + P
Sbjct: 63 ALNGTDFQGRSLVVNEARPKEKSFRP 88
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 105 KVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSV 164
+V ++ A LY+GNL + L E+F + G V + + D++T +G+GFV +
Sbjct: 21 QVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNE 80
Query: 165 EEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLG 224
+A A++L + ++ G+ +++N K + F D ++ GNL
Sbjct: 81 VDADYALKLMNMVKLYGKALRLN---------------KSAQDRRNF-DVGANVFLGNLD 124
Query: 225 WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEG 284
+ + + D F ++SAK++ + TG SRGFGFV+F+T E +AL AMNG +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICN 184
Query: 285 RPLRLNMANER 295
RP+ ++ A ++
Sbjct: 185 RPIHVSYAYKK 195
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 129 LAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLFDGSQIGGRTVKVNF 188
L E F+ G V ++ DR + RS+G +V V AI L G ++ G + V
Sbjct: 12 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGL-TGQRVLGVPIIVQA 70
Query: 189 PEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQGQPGLLSAKVI 248
+ + AAM LQ G P ++Y G+L + +T LR F+ + S +++
Sbjct: 71 SQAEKN-RAAAMANNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 125
Query: 249 FERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANER 295
+ TGRS+G+GF+TF +E + AL+ +NG E+ GRP+++ ER
Sbjct: 126 MDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 172
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 114 RLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRL 173
RLYVG+L +++T L +F G + S +++ D T RS+G+GF+T E AK+A+
Sbjct: 94 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 153
Query: 174 FDGSQIGGRTVKV 186
+G ++ GR +KV
Sbjct: 154 LNGFELAGRPMKV 166
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 115 LYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGFVTMGSVEEAKEAIRLF 174
++V L + + L F + G V A+IV DRV+ RS+G G+V S + AI+L
Sbjct: 183 IFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDAVAPAIQLT 242
Query: 175 DGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRD 234
G ++ G + E + R A P+ +S H++Y GN+ + +T L++
Sbjct: 243 -GQKLLGIPIIAQLTEAEK--NRQARNPEA-SSGNNHAAPFHRLYVGNIHFSITESDLQN 298
Query: 235 AFQGQP-GLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMAN 293
F+ P G L + + TGRSRG+GFV F + AL+ MNG ++ GR +R+ + N
Sbjct: 299 VFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRAIRVGLGN 356
Query: 294 ERAPP 298
++ P
Sbjct: 357 DKFTP 361
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,662,257,038
Number of Sequences: 23463169
Number of extensions: 197516007
Number of successful extensions: 2478140
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20147
Number of HSP's successfully gapped in prelim test: 8156
Number of HSP's that attempted gapping in prelim test: 2262562
Number of HSP's gapped (non-prelim): 150140
length of query: 323
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 181
effective length of database: 9,027,425,369
effective search space: 1633963991789
effective search space used: 1633963991789
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)