Query 020608
Match_columns 323
No_of_seqs 153 out of 2044
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 05:32:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ruf_A WBGU; rossmann fold, UD 100.0 1.6E-49 5.3E-54 352.2 25.8 308 2-319 22-348 (351)
2 2c29_D Dihydroflavonol 4-reduc 100.0 1.2E-48 4.1E-53 344.7 29.0 320 1-323 1-326 (337)
3 4egb_A DTDP-glucose 4,6-dehydr 100.0 5.2E-49 1.8E-53 348.2 26.5 308 1-320 20-338 (346)
4 3m2p_A UDP-N-acetylglucosamine 100.0 2.5E-48 8.7E-53 338.8 29.7 291 5-322 2-299 (311)
5 2rh8_A Anthocyanidin reductase 100.0 2.9E-48 9.8E-53 342.4 24.0 315 5-323 9-337 (338)
6 2p4h_X Vestitone reductase; NA 100.0 7.7E-48 2.6E-52 337.3 26.5 313 5-322 1-322 (322)
7 3enk_A UDP-glucose 4-epimerase 100.0 3.1E-47 1E-51 336.2 26.9 306 4-321 4-338 (341)
8 3ehe_A UDP-glucose 4-epimerase 100.0 4.2E-47 1.4E-51 331.5 26.9 294 5-320 1-303 (313)
9 1sb8_A WBPP; epimerase, 4-epim 100.0 5.5E-47 1.9E-51 336.0 27.0 307 3-319 25-350 (352)
10 3ko8_A NAD-dependent epimerase 100.0 4.7E-47 1.6E-51 330.9 22.9 294 6-321 1-311 (312)
11 3sxp_A ADP-L-glycero-D-mannohe 100.0 2.9E-46 9.9E-51 332.6 25.9 301 1-319 6-324 (362)
12 2hun_A 336AA long hypothetical 100.0 5E-46 1.7E-50 327.8 25.7 303 4-319 2-314 (336)
13 1oc2_A DTDP-glucose 4,6-dehydr 100.0 6.7E-46 2.3E-50 328.5 26.2 307 1-319 1-325 (348)
14 3slg_A PBGP3 protein; structur 100.0 4.7E-47 1.6E-51 338.9 18.7 304 3-319 22-360 (372)
15 2c20_A UDP-glucose 4-epimerase 100.0 1.1E-45 3.7E-50 324.8 26.3 297 5-320 1-325 (330)
16 4id9_A Short-chain dehydrogena 100.0 3.7E-46 1.2E-50 330.1 23.3 291 3-320 17-341 (347)
17 1rkx_A CDP-glucose-4,6-dehydra 100.0 4.9E-46 1.7E-50 330.5 23.6 305 3-319 7-336 (357)
18 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 8.9E-46 3E-50 324.1 24.9 294 4-319 11-321 (321)
19 2q1s_A Putative nucleotide sug 100.0 6.4E-46 2.2E-50 332.1 24.1 300 3-319 30-357 (377)
20 2x4g_A Nucleoside-diphosphate- 100.0 3.2E-45 1.1E-49 323.4 27.0 301 4-323 12-341 (342)
21 2p5y_A UDP-glucose 4-epimerase 100.0 8.5E-46 2.9E-50 322.9 23.0 295 6-319 1-310 (311)
22 1r6d_A TDP-glucose-4,6-dehydra 100.0 1.8E-45 6.3E-50 324.3 24.9 301 6-319 1-314 (337)
23 2c5a_A GDP-mannose-3', 5'-epim 100.0 3.8E-45 1.3E-49 327.2 27.2 305 1-319 25-341 (379)
24 1ek6_A UDP-galactose 4-epimera 100.0 5E-45 1.7E-49 322.9 26.2 304 5-320 2-341 (348)
25 1rpn_A GDP-mannose 4,6-dehydra 100.0 1E-44 3.4E-49 319.3 26.7 303 4-319 13-331 (335)
26 1orr_A CDP-tyvelose-2-epimeras 100.0 4.6E-45 1.6E-49 322.9 22.9 308 5-320 1-340 (347)
27 4b8w_A GDP-L-fucose synthase; 100.0 2.7E-45 9.1E-50 320.3 20.7 294 2-320 3-315 (319)
28 2yy7_A L-threonine dehydrogena 100.0 7.4E-46 2.5E-50 323.3 16.9 293 5-317 2-312 (312)
29 3vps_A TUNA, NAD-dependent epi 100.0 1.8E-45 6.2E-50 322.0 18.2 294 3-321 5-307 (321)
30 2bll_A Protein YFBG; decarboxy 100.0 6.6E-44 2.3E-48 315.3 26.6 305 6-322 1-340 (345)
31 1gy8_A UDP-galactose 4-epimera 100.0 7E-44 2.4E-48 321.1 26.7 307 5-319 2-378 (397)
32 1i24_A Sulfolipid biosynthesis 100.0 4.5E-44 1.5E-48 323.0 25.1 311 4-320 10-378 (404)
33 3gpi_A NAD-dependent epimerase 100.0 4.3E-45 1.5E-49 314.7 17.5 272 3-319 1-280 (286)
34 1e6u_A GDP-fucose synthetase; 100.0 2.2E-44 7.5E-49 315.3 21.0 286 4-320 2-316 (321)
35 1kew_A RMLB;, DTDP-D-glucose 4 100.0 2.4E-44 8.3E-49 320.1 21.3 305 6-319 1-337 (361)
36 1db3_A GDP-mannose 4,6-dehydra 100.0 3.1E-43 1E-47 314.2 28.1 303 5-319 1-352 (372)
37 2b69_A UDP-glucuronate decarbo 100.0 2.1E-43 7E-48 312.0 26.5 302 3-319 25-333 (343)
38 2pzm_A Putative nucleotide sug 100.0 2E-43 7E-48 310.3 26.3 291 3-322 18-319 (330)
39 1t2a_A GDP-mannose 4,6 dehydra 100.0 3E-43 1E-47 314.6 26.8 304 5-320 24-367 (375)
40 2z1m_A GDP-D-mannose dehydrata 100.0 4.2E-43 1.4E-47 310.0 27.4 304 3-319 1-337 (345)
41 1udb_A Epimerase, UDP-galactos 100.0 3.5E-43 1.2E-47 309.9 26.5 303 6-320 1-333 (338)
42 3sc6_A DTDP-4-dehydrorhamnose 100.0 4.3E-44 1.5E-48 308.6 19.2 272 6-319 6-287 (287)
43 1y1p_A ARII, aldehyde reductas 100.0 7.7E-43 2.6E-47 308.0 24.6 308 3-317 9-341 (342)
44 2x6t_A ADP-L-glycero-D-manno-h 100.0 3.1E-43 1.1E-47 312.5 21.6 293 4-319 45-356 (357)
45 2q1w_A Putative nucleotide sug 100.0 2.7E-42 9.3E-47 303.5 26.2 294 3-323 19-322 (333)
46 1eq2_A ADP-L-glycero-D-mannohe 100.0 4.1E-43 1.4E-47 305.7 20.8 290 7-319 1-309 (310)
47 3ajr_A NDP-sugar epimerase; L- 100.0 3.5E-43 1.2E-47 307.1 20.2 293 7-322 1-311 (317)
48 1n2s_A DTDP-4-, DTDP-glucose o 100.0 1.8E-43 6.3E-48 306.4 17.7 279 6-322 1-299 (299)
49 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 1.2E-42 4.3E-47 311.3 22.7 301 6-319 29-354 (381)
50 2ydy_A Methionine adenosyltran 100.0 7.8E-43 2.7E-47 304.7 18.3 283 5-319 2-299 (315)
51 2hrz_A AGR_C_4963P, nucleoside 100.0 1.7E-42 5.8E-47 306.0 18.5 301 3-323 12-342 (342)
52 1z45_A GAL10 bifunctional prot 100.0 1.7E-41 5.7E-46 326.0 26.5 311 2-321 8-353 (699)
53 1vl0_A DTDP-4-dehydrorhamnose 100.0 4.3E-42 1.5E-46 296.8 20.0 270 5-317 12-291 (292)
54 1z7e_A Protein aRNA; rossmann 100.0 1.8E-41 6.1E-46 323.4 25.6 308 3-322 313-655 (660)
55 3ius_A Uncharacterized conserv 100.0 7.2E-41 2.5E-45 288.3 21.7 265 3-315 3-283 (286)
56 2v6g_A Progesterone 5-beta-red 100.0 1.2E-39 4.2E-44 290.0 29.6 294 5-323 1-364 (364)
57 4b4o_A Epimerase family protei 100.0 2.2E-38 7.6E-43 274.3 20.6 272 6-314 1-293 (298)
58 3dhn_A NAD-dependent epimerase 100.0 6.5E-37 2.2E-41 254.7 21.2 223 1-259 1-226 (227)
59 3oh8_A Nucleoside-diphosphate 100.0 8.9E-38 3.1E-42 289.7 17.7 278 5-315 147-442 (516)
60 4f6c_A AUSA reductase domain p 100.0 1.9E-37 6.5E-42 281.6 18.7 306 3-319 67-413 (427)
61 2ggs_A 273AA long hypothetical 100.0 2E-37 7E-42 264.8 17.4 262 6-309 1-272 (273)
62 4dqv_A Probable peptide synthe 100.0 6.1E-36 2.1E-40 274.9 24.9 258 3-268 71-378 (478)
63 2gn4_A FLAA1 protein, UDP-GLCN 100.0 2.1E-36 7.2E-41 266.7 20.4 236 3-270 19-262 (344)
64 3ay3_A NAD-dependent epimerase 100.0 4.1E-36 1.4E-40 256.0 18.7 235 5-314 2-238 (267)
65 4f6l_B AUSA reductase domain p 100.0 1.6E-36 5.3E-41 281.3 17.2 305 4-319 149-494 (508)
66 3nzo_A UDP-N-acetylglucosamine 100.0 8.4E-35 2.9E-39 261.2 21.7 236 4-270 34-282 (399)
67 3rft_A Uronate dehydrogenase; 100.0 7E-35 2.4E-39 248.3 19.5 214 3-261 1-216 (267)
68 2jl1_A Triphenylmethane reduct 100.0 1E-34 3.5E-39 249.9 20.0 255 6-314 1-286 (287)
69 3dqp_A Oxidoreductase YLBE; al 100.0 9.9E-35 3.4E-39 240.2 14.8 208 6-264 1-210 (219)
70 3e8x_A Putative NAD-dependent 100.0 2.8E-34 9.7E-39 240.1 17.4 215 3-266 19-235 (236)
71 2zcu_A Uncharacterized oxidore 100.0 1.5E-34 5.2E-39 248.7 15.7 255 7-317 1-286 (286)
72 3st7_A Capsular polysaccharide 100.0 2.7E-33 9.2E-38 249.6 15.0 210 6-271 1-218 (369)
73 3h2s_A Putative NADH-flavin re 100.0 7.2E-32 2.5E-36 223.7 21.6 213 6-253 1-214 (224)
74 3ew7_A LMO0794 protein; Q8Y8U8 100.0 3.2E-32 1.1E-36 225.3 18.9 214 6-257 1-217 (221)
75 1xq6_A Unknown protein; struct 100.0 2.2E-32 7.4E-37 230.9 15.8 231 3-271 2-252 (253)
76 3i6i_A Putative leucoanthocyan 100.0 1.5E-32 5.1E-37 242.7 14.7 274 3-320 8-322 (346)
77 3m1a_A Putative dehydrogenase; 100.0 1E-31 3.5E-36 230.5 16.8 243 1-269 1-266 (281)
78 2a35_A Hypothetical protein PA 100.0 2.2E-32 7.6E-37 225.3 10.8 207 1-258 1-211 (215)
79 3e48_A Putative nucleoside-dip 100.0 1.4E-31 4.7E-36 230.6 16.1 252 6-313 1-281 (289)
80 2bka_A CC3, TAT-interacting pr 100.0 7.3E-31 2.5E-35 220.2 16.0 209 3-253 16-227 (242)
81 2bgk_A Rhizome secoisolaricire 100.0 8.8E-30 3E-34 218.1 22.6 241 1-268 12-276 (278)
82 2wm3_A NMRA-like family domain 100.0 2.1E-30 7.1E-35 224.3 17.4 224 5-271 5-235 (299)
83 1xgk_A Nitrogen metabolite rep 100.0 2.9E-30 9.8E-35 228.1 17.8 227 1-271 1-238 (352)
84 1fmc_A 7 alpha-hydroxysteroid 100.0 2.1E-29 7.2E-34 213.0 18.9 226 2-258 8-254 (255)
85 1spx_A Short-chain reductase f 100.0 4.2E-29 1.5E-33 213.8 19.6 236 3-268 4-276 (278)
86 3awd_A GOX2181, putative polyo 100.0 1.4E-28 4.7E-33 208.6 22.4 226 2-255 10-257 (260)
87 1hdo_A Biliverdin IX beta redu 100.0 1.2E-28 4.2E-33 201.4 20.0 202 4-254 2-204 (206)
88 1w6u_A 2,4-dienoyl-COA reducta 100.0 2.7E-29 9.1E-34 217.7 16.7 239 2-269 23-285 (302)
89 3un1_A Probable oxidoreductase 100.0 3.1E-28 1.1E-32 206.1 21.3 211 2-254 25-254 (260)
90 3osu_A 3-oxoacyl-[acyl-carrier 100.0 3.3E-28 1.1E-32 204.5 20.7 221 3-254 2-243 (246)
91 1cyd_A Carbonyl reductase; sho 100.0 1.1E-28 3.6E-33 207.3 17.4 218 2-253 4-239 (244)
92 3svt_A Short-chain type dehydr 100.0 9.3E-29 3.2E-33 211.9 17.1 240 2-271 8-274 (281)
93 3tzq_B Short-chain type dehydr 100.0 2.2E-27 7.5E-32 202.2 24.6 219 2-254 8-249 (271)
94 1xq1_A Putative tropinone redu 100.0 2.1E-28 7.3E-33 208.1 18.3 223 1-254 10-254 (266)
95 3pgx_A Carveol dehydrogenase; 100.0 5.2E-28 1.8E-32 207.2 20.8 230 3-255 13-277 (280)
96 3ai3_A NADPH-sorbose reductase 100.0 2.9E-28 9.9E-33 206.9 18.4 224 1-253 3-257 (263)
97 3v2h_A D-beta-hydroxybutyrate 100.0 9E-28 3.1E-32 205.6 21.0 231 1-254 21-277 (281)
98 2hq1_A Glucose/ribitol dehydro 100.0 5.7E-28 2E-32 203.2 19.2 222 1-254 1-244 (247)
99 3s55_A Putative short-chain de 100.0 1.2E-27 4.2E-32 205.0 21.6 228 2-254 7-275 (281)
100 4e6p_A Probable sorbitol dehyd 100.0 5.9E-28 2E-32 204.5 19.1 222 3-254 6-255 (259)
101 1ja9_A 4HNR, 1,3,6,8-tetrahydr 100.0 4.3E-28 1.5E-32 207.1 18.4 224 1-254 17-272 (274)
102 3tpc_A Short chain alcohol deh 100.0 9E-28 3.1E-32 203.2 20.1 219 1-253 3-250 (257)
103 2cfc_A 2-(R)-hydroxypropyl-COM 100.0 1.5E-27 5E-32 201.1 21.2 221 4-254 1-246 (250)
104 3lyl_A 3-oxoacyl-(acyl-carrier 100.0 1.5E-27 5.2E-32 200.6 21.3 221 1-253 1-242 (247)
105 3pk0_A Short-chain dehydrogena 100.0 1.3E-27 4.4E-32 202.6 20.9 221 1-253 6-249 (262)
106 3imf_A Short chain dehydrogena 100.0 2.6E-27 9E-32 200.2 22.5 223 2-253 3-248 (257)
107 3sx2_A Putative 3-ketoacyl-(ac 100.0 1.5E-27 5.1E-32 204.2 20.5 233 2-253 10-273 (278)
108 3d3w_A L-xylulose reductase; u 100.0 1.5E-27 5.1E-32 200.3 20.0 220 1-254 3-240 (244)
109 2pnf_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-27 3.6E-32 201.6 19.0 220 3-254 5-246 (248)
110 3v8b_A Putative dehydrogenase, 100.0 3.3E-27 1.1E-31 202.2 22.3 232 1-254 24-278 (283)
111 3gaf_A 7-alpha-hydroxysteroid 100.0 1.1E-27 3.8E-32 202.4 18.9 222 2-254 9-250 (256)
112 3rd5_A Mypaa.01249.C; ssgcid, 100.0 6E-27 2.1E-31 201.7 23.5 228 2-251 13-250 (291)
113 2ae2_A Protein (tropinone redu 100.0 4.6E-27 1.6E-31 199.2 22.4 225 1-254 5-253 (260)
114 2pd6_A Estradiol 17-beta-dehyd 100.0 1.2E-27 4E-32 203.3 18.6 220 3-254 5-254 (264)
115 3op4_A 3-oxoacyl-[acyl-carrier 100.0 4.9E-27 1.7E-31 197.4 21.8 219 1-254 5-244 (248)
116 4fn4_A Short chain dehydrogena 100.0 4.8E-27 1.6E-31 196.0 21.4 229 1-257 3-252 (254)
117 1qyd_A Pinoresinol-lariciresin 100.0 2.4E-28 8.2E-33 212.7 14.1 233 1-271 1-242 (313)
118 2wsb_A Galactitol dehydrogenas 100.0 1.5E-27 5.3E-32 201.4 18.4 223 1-254 7-250 (254)
119 2o23_A HADH2 protein; HSD17B10 100.0 9.8E-27 3.3E-31 197.7 23.4 219 1-253 8-257 (265)
120 3u9l_A 3-oxoacyl-[acyl-carrier 100.0 3.3E-27 1.1E-31 205.8 20.9 237 1-257 1-271 (324)
121 2yut_A Putative short-chain ox 100.0 5.8E-28 2E-32 197.7 15.1 193 6-247 1-203 (207)
122 3i4f_A 3-oxoacyl-[acyl-carrier 100.0 3.1E-27 1.1E-31 200.7 20.0 223 2-253 4-249 (264)
123 2rhc_B Actinorhodin polyketide 100.0 1.4E-27 4.9E-32 204.0 17.7 224 2-254 19-273 (277)
124 2q2v_A Beta-D-hydroxybutyrate 100.0 2.1E-27 7.2E-32 200.7 18.4 222 3-254 2-251 (255)
125 2dkn_A 3-alpha-hydroxysteroid 100.0 6.1E-29 2.1E-33 210.0 8.9 227 5-258 1-250 (255)
126 1ae1_A Tropinone reductase-I; 100.0 7.7E-27 2.6E-31 199.1 22.0 225 1-254 17-266 (273)
127 4dmm_A 3-oxoacyl-[acyl-carrier 100.0 2.6E-27 9E-32 201.4 18.7 219 1-253 24-264 (269)
128 3afn_B Carbonyl reductase; alp 100.0 6.8E-28 2.3E-32 204.0 14.9 221 3-255 5-255 (258)
129 3oid_A Enoyl-[acyl-carrier-pro 100.0 1.8E-26 6.1E-31 195.1 23.5 221 4-254 3-245 (258)
130 3v2g_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-26 5.5E-31 196.7 23.3 221 2-253 28-267 (271)
131 2zat_A Dehydrogenase/reductase 100.0 3.6E-27 1.2E-31 199.8 19.2 221 3-253 12-254 (260)
132 2fwm_X 2,3-dihydro-2,3-dihydro 100.0 5.6E-27 1.9E-31 197.4 20.1 219 1-253 3-244 (250)
133 3uf0_A Short-chain dehydrogena 100.0 4.5E-27 1.5E-31 200.3 19.2 222 2-254 28-269 (273)
134 3tox_A Short chain dehydrogena 100.0 1.3E-26 4.3E-31 198.2 21.9 223 3-254 6-252 (280)
135 2ph3_A 3-oxoacyl-[acyl carrier 100.0 2.3E-27 7.8E-32 199.2 17.0 219 5-255 1-242 (245)
136 2z1n_A Dehydrogenase; reductas 100.0 3.6E-27 1.2E-31 199.8 18.3 224 1-253 3-256 (260)
137 1nff_A Putative oxidoreductase 100.0 1.5E-26 5.1E-31 195.9 22.0 212 3-254 5-237 (260)
138 3r1i_A Short-chain type dehydr 100.0 5.3E-27 1.8E-31 200.2 19.2 222 2-254 29-272 (276)
139 1sby_A Alcohol dehydrogenase; 100.0 3.3E-27 1.1E-31 199.4 17.8 218 1-254 1-239 (254)
140 3rih_A Short chain dehydrogena 100.0 6.6E-27 2.3E-31 201.1 19.9 220 2-253 38-280 (293)
141 3pxx_A Carveol dehydrogenase; 100.0 1.8E-26 6.1E-31 198.4 22.4 238 2-254 7-282 (287)
142 3qiv_A Short-chain dehydrogena 100.0 3.5E-27 1.2E-31 199.1 17.6 219 1-253 5-247 (253)
143 3ak4_A NADH-dependent quinucli 100.0 1.2E-26 4.1E-31 196.9 21.0 220 3-254 10-259 (263)
144 3gem_A Short chain dehydrogena 100.0 1.5E-26 5E-31 195.8 21.4 214 1-253 23-253 (260)
145 4iiu_A 3-oxoacyl-[acyl-carrier 100.0 1E-26 3.4E-31 197.8 20.5 220 3-254 24-265 (267)
146 2c07_A 3-oxoacyl-(acyl-carrier 100.0 1.4E-26 4.8E-31 198.8 21.3 221 2-254 41-282 (285)
147 3h7a_A Short chain dehydrogena 100.0 5.5E-27 1.9E-31 197.6 18.2 211 2-245 4-232 (252)
148 1yo6_A Putative carbonyl reduc 99.9 6.1E-27 2.1E-31 197.1 18.4 206 3-251 1-242 (250)
149 1qyc_A Phenylcoumaran benzylic 99.9 7.6E-28 2.6E-32 209.0 13.1 227 1-271 1-237 (308)
150 4da9_A Short-chain dehydrogena 99.9 1.4E-26 4.7E-31 198.1 20.4 221 3-253 27-273 (280)
151 1uay_A Type II 3-hydroxyacyl-C 99.9 5.7E-27 1.9E-31 196.4 17.7 207 4-253 1-235 (242)
152 2wyu_A Enoyl-[acyl carrier pro 99.9 6.1E-27 2.1E-31 198.4 18.0 222 2-254 5-251 (261)
153 3sju_A Keto reductase; short-c 99.9 1.2E-26 4.1E-31 198.5 19.8 222 4-254 23-275 (279)
154 3cxt_A Dehydrogenase with diff 99.9 1.8E-26 6.2E-31 198.3 20.8 225 1-254 30-280 (291)
155 2p91_A Enoyl-[acyl-carrier-pro 99.9 2.9E-26 1E-30 196.8 22.0 221 3-254 19-265 (285)
156 2ew8_A (S)-1-phenylethanol deh 99.9 1.1E-26 3.9E-31 195.4 19.1 220 3-254 5-245 (249)
157 3f9i_A 3-oxoacyl-[acyl-carrier 99.9 4.1E-26 1.4E-30 192.1 22.5 217 3-254 12-245 (249)
158 1xhl_A Short-chain dehydrogena 99.9 7.9E-27 2.7E-31 201.2 18.5 236 1-266 22-292 (297)
159 2b4q_A Rhamnolipids biosynthes 99.9 3.4E-26 1.2E-30 195.3 22.2 221 1-253 25-272 (276)
160 2uvd_A 3-oxoacyl-(acyl-carrier 99.9 3.2E-26 1.1E-30 192.4 21.7 220 3-253 2-242 (246)
161 2d1y_A Hypothetical protein TT 99.9 7E-27 2.4E-31 197.5 17.8 219 1-254 2-244 (256)
162 1qsg_A Enoyl-[acyl-carrier-pro 99.9 9.4E-27 3.2E-31 197.8 18.5 221 3-254 7-253 (265)
163 3edm_A Short chain dehydrogena 99.9 1.4E-26 4.7E-31 196.0 19.4 226 2-257 5-250 (259)
164 3p19_A BFPVVD8, putative blue 99.9 2.8E-26 9.6E-31 194.7 21.3 207 3-246 14-239 (266)
165 1mxh_A Pteridine reductase 2; 99.9 4E-26 1.4E-30 195.1 22.4 219 3-254 9-270 (276)
166 2r6j_A Eugenol synthase 1; phe 99.9 2.1E-27 7.3E-32 207.2 14.7 218 5-271 11-236 (318)
167 4dqx_A Probable oxidoreductase 99.9 1.1E-26 3.8E-31 198.3 18.8 222 1-254 23-268 (277)
168 3ijr_A Oxidoreductase, short c 99.9 9.6E-27 3.3E-31 200.2 18.6 222 3-254 45-286 (291)
169 4e3z_A Putative oxidoreductase 99.9 1.5E-26 5.2E-31 197.3 19.5 221 4-253 25-270 (272)
170 1gee_A Glucose 1-dehydrogenase 99.9 2E-26 6.9E-31 195.3 20.2 223 3-254 5-249 (261)
171 3d7l_A LIN1944 protein; APC893 99.9 1.5E-27 5.1E-32 194.5 12.5 186 6-251 4-201 (202)
172 4iin_A 3-ketoacyl-acyl carrier 99.9 1.7E-26 5.7E-31 196.9 19.5 222 1-253 25-267 (271)
173 3dii_A Short-chain dehydrogena 99.9 2.5E-26 8.7E-31 193.0 20.3 211 4-254 1-228 (247)
174 3ftp_A 3-oxoacyl-[acyl-carrier 99.9 7.3E-27 2.5E-31 198.7 17.1 220 3-254 26-266 (270)
175 3ucx_A Short chain dehydrogena 99.9 8.6E-27 3E-31 197.8 17.3 222 3-254 9-260 (264)
176 2bd0_A Sepiapterin reductase; 99.9 4.2E-26 1.4E-30 191.4 21.3 200 5-245 2-226 (244)
177 1iy8_A Levodione reductase; ox 99.9 2.8E-26 9.5E-31 195.1 20.2 223 2-253 10-261 (267)
178 3tfo_A Putative 3-oxoacyl-(acy 99.9 2.3E-26 8E-31 194.7 19.5 210 3-245 2-227 (264)
179 3grp_A 3-oxoacyl-(acyl carrier 99.9 1.5E-26 5.3E-31 196.3 18.3 218 2-254 24-262 (266)
180 4ibo_A Gluconate dehydrogenase 99.9 4.9E-27 1.7E-31 199.9 15.2 223 2-254 23-266 (271)
181 1edo_A Beta-keto acyl carrier 99.9 1.1E-26 3.9E-31 194.9 17.2 218 5-254 1-241 (244)
182 1h5q_A NADP-dependent mannitol 99.9 9.5E-27 3.2E-31 197.8 16.9 229 1-254 10-261 (265)
183 2gas_A Isoflavone reductase; N 99.9 3.7E-27 1.3E-31 204.6 14.6 225 4-271 1-236 (307)
184 3qvo_A NMRA family protein; st 99.9 2.6E-26 9E-31 191.7 19.1 201 3-254 21-224 (236)
185 3t4x_A Oxidoreductase, short c 99.9 4.8E-26 1.6E-30 193.6 21.0 229 1-254 6-261 (267)
186 3tl3_A Short-chain type dehydr 99.9 2.6E-26 9E-31 194.1 19.3 216 1-253 5-250 (257)
187 3r3s_A Oxidoreductase; structu 99.9 5E-27 1.7E-31 202.3 14.9 224 2-253 46-289 (294)
188 3ioy_A Short-chain dehydrogena 99.9 7.1E-27 2.4E-31 203.5 15.9 241 3-270 6-278 (319)
189 3gvc_A Oxidoreductase, probabl 99.9 4.7E-26 1.6E-30 194.4 20.6 223 3-254 27-271 (277)
190 3c1o_A Eugenol synthase; pheny 99.9 2.5E-27 8.5E-32 207.0 13.0 222 4-271 3-237 (321)
191 3ctm_A Carbonyl reductase; alc 99.9 2.3E-26 7.8E-31 196.9 18.7 223 1-254 30-275 (279)
192 3uve_A Carveol dehydrogenase ( 99.9 2.7E-25 9.3E-30 190.9 25.4 226 3-253 9-281 (286)
193 1x1t_A D(-)-3-hydroxybutyrate 99.9 3.1E-26 1E-30 194.1 19.2 224 3-254 2-256 (260)
194 1zk4_A R-specific alcohol dehy 99.9 3.4E-26 1.2E-30 192.8 19.4 221 2-254 3-247 (251)
195 3lf2_A Short chain oxidoreduct 99.9 2.6E-26 8.8E-31 195.0 18.6 226 1-253 4-259 (265)
196 4dyv_A Short-chain dehydrogena 99.9 4.5E-26 1.5E-30 194.0 20.0 209 3-247 26-255 (272)
197 3tjr_A Short chain dehydrogena 99.9 1.7E-26 5.8E-31 199.6 17.5 217 3-244 29-267 (301)
198 3t7c_A Carveol dehydrogenase; 99.9 1.5E-25 5.3E-30 193.5 23.6 225 3-253 26-294 (299)
199 3r6d_A NAD-dependent epimerase 99.9 3.2E-26 1.1E-30 189.2 18.4 194 3-244 3-199 (221)
200 1uls_A Putative 3-oxoacyl-acyl 99.9 2.1E-25 7.2E-30 187.2 23.6 215 1-253 1-236 (245)
201 1wma_A Carbonyl reductase [NAD 99.9 4.1E-26 1.4E-30 194.8 19.5 223 3-251 2-269 (276)
202 1xkq_A Short-chain reductase f 99.9 5.1E-26 1.7E-30 194.8 19.9 223 2-254 3-261 (280)
203 1hdc_A 3-alpha, 20 beta-hydrox 99.9 1.6E-25 5.4E-30 189.0 22.6 216 2-254 2-241 (254)
204 2jah_A Clavulanic acid dehydro 99.9 1.2E-25 4.2E-30 188.8 21.8 210 3-244 5-232 (247)
205 3rwb_A TPLDH, pyridoxal 4-dehy 99.9 5.2E-26 1.8E-30 191.1 19.5 219 2-254 3-243 (247)
206 3rkr_A Short chain oxidoreduct 99.9 6.1E-26 2.1E-30 192.4 20.1 203 3-245 27-248 (262)
207 1g0o_A Trihydroxynaphthalene r 99.9 4.1E-26 1.4E-30 195.7 18.9 226 1-253 25-279 (283)
208 3n74_A 3-ketoacyl-(acyl-carrie 99.9 6.3E-26 2.2E-30 192.3 19.9 221 1-253 5-252 (261)
209 2ehd_A Oxidoreductase, oxidore 99.9 8.5E-26 2.9E-30 188.4 20.3 197 1-244 1-215 (234)
210 2dtx_A Glucose 1-dehydrogenase 99.9 2.4E-26 8.2E-31 195.0 17.1 212 3-254 6-245 (264)
211 3is3_A 17BETA-hydroxysteroid d 99.9 1.1E-25 3.8E-30 191.6 21.3 223 3-253 16-267 (270)
212 3vtz_A Glucose 1-dehydrogenase 99.9 4.8E-26 1.6E-30 193.6 19.0 213 3-254 12-252 (269)
213 3a28_C L-2.3-butanediol dehydr 99.9 3.6E-26 1.2E-30 193.4 17.9 222 5-253 2-253 (258)
214 3u5t_A 3-oxoacyl-[acyl-carrier 99.9 9.7E-26 3.3E-30 191.5 20.5 223 1-253 23-264 (267)
215 3tsc_A Putative oxidoreductase 99.9 6.8E-26 2.3E-30 193.7 19.6 229 3-254 9-273 (277)
216 3k31_A Enoyl-(acyl-carrier-pro 99.9 3.6E-25 1.2E-29 190.9 24.0 222 2-254 27-273 (296)
217 4egf_A L-xylulose reductase; s 99.9 6.6E-26 2.3E-30 192.5 19.1 222 2-253 17-261 (266)
218 3gk3_A Acetoacetyl-COA reducta 99.9 1E-25 3.5E-30 191.8 20.3 221 3-253 23-264 (269)
219 3o38_A Short chain dehydrogena 99.9 2.6E-25 8.9E-30 189.0 22.7 220 3-253 20-263 (266)
220 3ged_A Short-chain dehydrogena 99.9 1.9E-25 6.5E-30 185.6 21.2 212 5-257 2-230 (247)
221 1yxm_A Pecra, peroxisomal tran 99.9 4.3E-26 1.5E-30 197.6 18.1 222 3-254 16-264 (303)
222 1geg_A Acetoin reductase; SDR 99.9 5.5E-26 1.9E-30 192.0 18.3 220 5-253 2-251 (256)
223 2ag5_A DHRS6, dehydrogenase/re 99.9 2.3E-26 7.9E-31 193.2 15.8 219 2-253 3-241 (246)
224 2pd4_A Enoyl-[acyl-carrier-pro 99.9 1.3E-25 4.4E-30 191.8 20.6 223 1-254 1-249 (275)
225 1vl8_A Gluconate 5-dehydrogena 99.9 1.3E-25 4.4E-30 190.8 20.3 222 2-253 18-262 (267)
226 3ezl_A Acetoacetyl-COA reducta 99.9 5E-26 1.7E-30 192.3 17.5 220 3-254 11-252 (256)
227 1yb1_A 17-beta-hydroxysteroid 99.9 2E-26 7E-31 196.4 15.2 202 1-244 27-249 (272)
228 3l6e_A Oxidoreductase, short-c 99.9 5.6E-26 1.9E-30 189.4 17.2 198 3-245 1-216 (235)
229 4gkb_A 3-oxoacyl-[acyl-carrier 99.9 5.2E-25 1.8E-29 184.6 23.1 222 1-251 3-245 (258)
230 3qlj_A Short chain dehydrogena 99.9 3.1E-26 1.1E-30 199.9 16.3 235 3-271 25-312 (322)
231 3ksu_A 3-oxoacyl-acyl carrier 99.9 2.9E-26 1E-30 194.2 15.4 226 2-256 8-252 (262)
232 4eso_A Putative oxidoreductase 99.9 3.1E-25 1E-29 187.2 21.6 219 3-253 6-245 (255)
233 2gdz_A NAD+-dependent 15-hydro 99.9 4.4E-26 1.5E-30 193.9 16.4 224 4-260 6-257 (267)
234 3oig_A Enoyl-[acyl-carrier-pro 99.9 6.1E-25 2.1E-29 186.7 23.4 223 2-253 4-251 (266)
235 3uxy_A Short-chain dehydrogena 99.9 4.7E-26 1.6E-30 193.3 16.5 212 2-253 25-261 (266)
236 4fc7_A Peroxisomal 2,4-dienoyl 99.9 4E-26 1.4E-30 195.0 16.1 223 3-254 25-269 (277)
237 3rku_A Oxidoreductase YMR226C; 99.9 3.5E-26 1.2E-30 196.0 15.3 211 3-245 31-265 (287)
238 3oec_A Carveol dehydrogenase ( 99.9 4.4E-25 1.5E-29 192.1 22.4 227 3-254 44-312 (317)
239 1sny_A Sniffer CG10964-PA; alp 99.9 2.5E-25 8.5E-30 189.2 20.2 209 3-256 19-265 (267)
240 3uce_A Dehydrogenase; rossmann 99.9 9.2E-26 3.1E-30 186.7 16.9 204 1-253 2-218 (223)
241 3l77_A Short-chain alcohol deh 99.9 2.7E-25 9.3E-30 185.4 19.8 202 4-245 1-218 (235)
242 4g81_D Putative hexonate dehyd 99.9 1.1E-25 3.7E-30 188.0 17.2 222 2-253 6-249 (255)
243 4imr_A 3-oxoacyl-(acyl-carrier 99.9 1.8E-26 6.1E-31 196.9 12.6 224 2-253 30-273 (275)
244 1xg5_A ARPG836; short chain de 99.9 8.8E-26 3E-30 193.3 16.8 212 3-244 30-265 (279)
245 4dry_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-25 4.1E-30 192.3 17.6 213 3-249 31-266 (281)
246 1hxh_A 3BETA/17BETA-hydroxyste 99.9 1.2E-25 4.2E-30 189.5 17.3 221 3-254 4-247 (253)
247 3nyw_A Putative oxidoreductase 99.9 1.4E-25 4.7E-30 188.8 17.5 205 3-245 5-227 (250)
248 4fgs_A Probable dehydrogenase 99.9 3.6E-25 1.2E-29 186.4 19.8 217 3-251 27-265 (273)
249 3grk_A Enoyl-(acyl-carrier-pro 99.9 9.1E-25 3.1E-29 188.0 22.5 221 3-254 29-274 (293)
250 2nm0_A Probable 3-oxacyl-(acyl 99.9 2.1E-25 7.2E-30 187.9 18.0 209 2-253 18-247 (253)
251 2x9g_A PTR1, pteridine reducta 99.9 3.6E-25 1.2E-29 190.2 19.7 218 2-253 20-281 (288)
252 3ek2_A Enoyl-(acyl-carrier-pro 99.9 2.3E-25 8E-30 189.8 18.2 228 3-261 12-266 (271)
253 1uzm_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-25 7.6E-30 187.3 17.7 210 2-254 12-242 (247)
254 3nrc_A Enoyl-[acyl-carrier-pro 99.9 9.7E-25 3.3E-29 186.8 21.8 220 3-254 24-270 (280)
255 3sc4_A Short chain dehydrogena 99.9 5.9E-25 2E-29 188.5 20.4 215 1-251 5-244 (285)
256 2a4k_A 3-oxoacyl-[acyl carrier 99.9 4.9E-25 1.7E-29 186.7 19.4 217 2-254 3-238 (263)
257 4e4y_A Short chain dehydrogena 99.9 8.4E-26 2.9E-30 189.6 14.4 212 3-253 2-239 (244)
258 3kzv_A Uncharacterized oxidore 99.9 3.1E-25 1E-29 187.2 17.9 216 5-253 2-246 (254)
259 1zem_A Xylitol dehydrogenase; 99.9 1.4E-25 4.6E-30 190.3 15.6 212 3-243 5-248 (262)
260 3f1l_A Uncharacterized oxidore 99.9 3.8E-25 1.3E-29 186.4 18.2 211 3-253 10-244 (252)
261 3gdg_A Probable NADP-dependent 99.9 6E-25 2E-29 186.9 19.3 223 2-253 17-262 (267)
262 3ppi_A 3-hydroxyacyl-COA dehyd 99.9 3.1E-25 1E-29 190.1 17.6 217 3-253 28-274 (281)
263 2qhx_A Pteridine reductase 1; 99.9 7.6E-25 2.6E-29 191.3 20.3 219 3-254 44-322 (328)
264 3guy_A Short-chain dehydrogena 99.9 4.6E-25 1.6E-29 183.4 18.1 198 5-245 1-212 (230)
265 1yde_A Retinal dehydrogenase/r 99.9 5.2E-25 1.8E-29 187.4 18.5 218 3-253 7-247 (270)
266 2ekp_A 2-deoxy-D-gluconate 3-d 99.9 7.6E-25 2.6E-29 183.1 18.8 213 5-254 2-235 (239)
267 3icc_A Putative 3-oxoacyl-(acy 99.9 1.9E-24 6.5E-29 182.5 21.2 223 3-254 5-252 (255)
268 4b79_A PA4098, probable short- 99.9 2.9E-24 9.8E-29 177.3 21.7 211 4-250 10-233 (242)
269 3asu_A Short-chain dehydrogena 99.9 9.3E-25 3.2E-29 183.5 19.1 204 6-244 1-224 (248)
270 2nwq_A Probable short-chain de 99.9 1.2E-24 4E-29 185.2 19.6 206 6-244 22-247 (272)
271 4hp8_A 2-deoxy-D-gluconate 3-d 99.9 7E-25 2.4E-29 181.3 17.0 219 3-253 7-241 (247)
272 1ooe_A Dihydropteridine reduct 99.9 4E-25 1.4E-29 184.5 15.7 188 3-240 1-209 (236)
273 1o5i_A 3-oxoacyl-(acyl carrier 99.9 1.2E-24 4E-29 183.0 18.1 211 3-254 17-243 (249)
274 3zv4_A CIS-2,3-dihydrobiphenyl 99.9 4.6E-24 1.6E-28 182.6 21.9 221 1-253 1-253 (281)
275 3e9n_A Putative short-chain de 99.9 1.6E-25 5.6E-30 187.9 12.7 209 1-252 1-226 (245)
276 3e03_A Short chain dehydrogena 99.9 8.9E-25 3E-29 186.4 16.7 214 1-251 2-241 (274)
277 1e7w_A Pteridine reductase; di 99.9 6.1E-24 2.1E-28 182.7 21.7 219 2-253 6-284 (291)
278 1fjh_A 3alpha-hydroxysteroid d 99.9 4E-25 1.4E-29 186.9 14.1 221 5-254 1-247 (257)
279 3orf_A Dihydropteridine reduct 99.9 1E-24 3.5E-29 183.7 15.9 197 4-252 21-240 (251)
280 4fs3_A Enoyl-[acyl-carrier-pro 99.9 2.3E-23 7.8E-28 175.7 23.0 223 1-253 2-249 (256)
281 3kvo_A Hydroxysteroid dehydrog 99.9 5.8E-24 2E-28 186.6 19.8 214 3-252 43-280 (346)
282 1xu9_A Corticosteroid 11-beta- 99.9 3E-24 1E-28 184.4 16.9 203 3-245 26-248 (286)
283 3i1j_A Oxidoreductase, short c 99.9 6.3E-24 2.2E-28 178.5 18.4 201 3-243 12-235 (247)
284 2qq5_A DHRS1, dehydrogenase/re 99.9 8.9E-24 3.1E-28 178.9 19.3 215 2-244 2-242 (260)
285 4h15_A Short chain alcohol deh 99.9 8.2E-24 2.8E-28 177.9 18.7 216 1-254 7-256 (261)
286 1dhr_A Dihydropteridine reduct 99.9 2.6E-24 8.8E-29 180.1 14.8 199 4-252 6-228 (241)
287 1jtv_A 17 beta-hydroxysteroid 99.9 2.6E-23 9E-28 181.5 19.7 223 4-250 1-254 (327)
288 1oaa_A Sepiapterin reductase; 99.9 8.1E-24 2.8E-28 179.0 16.0 212 2-242 3-246 (259)
289 1zmt_A Haloalcohol dehalogenas 99.9 9.5E-24 3.3E-28 178.1 14.8 218 5-254 1-242 (254)
290 3u0b_A Oxidoreductase, short c 99.9 8.9E-23 3E-27 185.1 20.2 216 3-253 211-448 (454)
291 3o26_A Salutaridine reductase; 99.9 1.4E-22 4.6E-27 176.1 20.3 210 3-244 10-295 (311)
292 2fr1_A Erythromycin synthase, 99.9 5.8E-23 2E-27 188.0 18.3 226 4-268 225-462 (486)
293 2h7i_A Enoyl-[acyl-carrier-pro 99.9 4E-23 1.4E-27 175.7 14.9 217 3-250 5-258 (269)
294 1gz6_A Estradiol 17 beta-dehyd 99.9 1.9E-22 6.5E-27 175.3 17.7 211 1-254 5-242 (319)
295 2z5l_A Tylkr1, tylactone synth 99.9 2.9E-22 9.8E-27 184.1 18.0 227 4-269 258-493 (511)
296 1zmo_A Halohydrin dehalogenase 99.9 1.9E-21 6.4E-26 163.0 19.6 212 5-253 1-240 (244)
297 1d7o_A Enoyl-[acyl-carrier pro 99.9 1.1E-21 3.8E-26 169.2 18.3 227 1-254 4-284 (297)
298 3mje_A AMPHB; rossmann fold, o 99.9 2.1E-21 7.3E-26 177.1 15.2 207 5-245 239-458 (496)
299 1y7t_A Malate dehydrogenase; N 99.9 4.4E-22 1.5E-26 173.7 9.0 178 1-198 1-189 (327)
300 2ptg_A Enoyl-acyl carrier redu 99.9 8.5E-21 2.9E-25 165.3 14.4 229 1-251 5-300 (319)
301 2o2s_A Enoyl-acyl carrier redu 99.8 1.1E-20 3.7E-25 164.4 14.8 225 2-252 6-288 (315)
302 3qp9_A Type I polyketide synth 99.8 9.2E-21 3.1E-25 174.8 14.7 227 4-269 250-504 (525)
303 3oml_A GH14720P, peroxisomal m 99.8 4.6E-20 1.6E-24 173.5 15.1 198 1-243 15-239 (613)
304 3lt0_A Enoyl-ACP reductase; tr 99.8 8.1E-20 2.8E-24 159.7 12.7 172 5-196 2-224 (329)
305 2et6_A (3R)-hydroxyacyl-COA de 99.8 4.4E-18 1.5E-22 159.5 17.4 203 2-248 319-538 (604)
306 2uv8_A Fatty acid synthase sub 99.8 1.2E-17 4.2E-22 169.0 19.6 208 1-243 671-912 (1887)
307 2uv9_A Fatty acid synthase alp 99.8 5.4E-17 1.8E-21 164.1 21.7 208 1-243 648-887 (1878)
308 3zu3_A Putative reductase YPO4 99.7 2.2E-17 7.4E-22 144.5 15.2 211 4-242 46-321 (405)
309 2pff_A Fatty acid synthase sub 99.7 6.6E-18 2.3E-22 166.0 12.4 208 1-243 472-713 (1688)
310 3s8m_A Enoyl-ACP reductase; ro 99.7 1.9E-17 6.4E-22 146.2 13.8 211 4-242 60-335 (422)
311 3slk_A Polyketide synthase ext 99.7 1.3E-17 4.5E-22 160.8 12.7 208 4-245 529-749 (795)
312 2et6_A (3R)-hydroxyacyl-COA de 99.7 2.5E-17 8.6E-22 154.4 14.3 199 2-243 5-228 (604)
313 4eue_A Putative reductase CA_C 99.7 2.1E-16 7E-21 140.7 15.1 216 4-249 59-342 (418)
314 3zen_D Fatty acid synthase; tr 99.5 3.9E-13 1.3E-17 142.9 22.0 229 3-265 2134-2412(3089)
315 2vz8_A Fatty acid synthase; tr 99.5 5.2E-14 1.8E-18 149.6 14.6 169 4-194 1883-2065(2512)
316 3ic5_A Putative saccharopine d 99.4 1.8E-12 6.2E-17 95.3 11.1 96 3-125 3-99 (118)
317 1b8p_A Protein (malate dehydro 99.4 4.6E-13 1.6E-17 116.4 7.0 179 1-196 1-190 (329)
318 1smk_A Malate dehydrogenase, g 99.2 6.4E-11 2.2E-15 102.6 12.0 118 4-129 7-126 (326)
319 4ggo_A Trans-2-enoyl-COA reduc 99.1 9E-10 3.1E-14 95.6 14.1 175 4-197 49-285 (401)
320 1lu9_A Methylene tetrahydromet 99.1 2.2E-10 7.6E-15 97.8 8.1 82 3-87 117-198 (287)
321 1hye_A L-lactate/malate dehydr 99.1 6E-10 2E-14 96.1 10.7 170 6-196 1-178 (313)
322 2hmt_A YUAA protein; RCK, KTN, 99.0 3.3E-09 1.1E-13 80.5 11.7 102 3-129 4-106 (144)
323 3llv_A Exopolyphosphatase-rela 99.0 3.6E-09 1.2E-13 80.2 10.9 77 1-86 1-79 (141)
324 1o6z_A MDH, malate dehydrogena 99.0 4.1E-09 1.4E-13 90.4 12.3 167 6-196 1-175 (303)
325 1ff9_A Saccharopine reductase; 98.9 6.2E-09 2.1E-13 94.1 10.0 108 4-121 2-118 (450)
326 1lss_A TRK system potassium up 98.8 1.1E-07 3.6E-12 71.6 13.9 100 4-128 3-103 (140)
327 4ina_A Saccharopine dehydrogen 98.8 3.6E-08 1.2E-12 88.0 11.4 101 5-127 1-107 (405)
328 5mdh_A Malate dehydrogenase; o 98.7 2.1E-08 7.2E-13 86.7 7.9 119 5-129 3-131 (333)
329 1id1_A Putative potassium chan 98.7 5.4E-07 1.9E-11 69.0 13.7 78 4-86 2-80 (153)
330 2gk4_A Conserved hypothetical 98.7 5.6E-08 1.9E-12 78.9 8.3 76 4-90 2-97 (232)
331 3abi_A Putative uncharacterize 98.7 2.2E-07 7.5E-12 81.9 12.6 95 3-127 14-108 (365)
332 1mld_A Malate dehydrogenase; o 98.7 2.6E-07 8.9E-12 79.5 12.3 114 6-129 1-119 (314)
333 1u7z_A Coenzyme A biosynthesis 98.6 1E-07 3.5E-12 77.2 9.0 74 3-89 6-99 (226)
334 2g1u_A Hypothetical protein TM 98.6 4.3E-07 1.5E-11 69.8 11.6 75 4-86 18-93 (155)
335 2axq_A Saccharopine dehydrogen 98.6 5.5E-08 1.9E-12 88.1 7.5 79 2-88 20-99 (467)
336 1dih_A Dihydrodipicolinate red 98.5 4.6E-08 1.6E-12 82.3 2.6 38 1-38 1-39 (273)
337 3c85_A Putative glutathione-re 98.5 1.4E-06 4.7E-11 68.9 10.5 74 4-86 38-114 (183)
338 3l4b_C TRKA K+ channel protien 98.4 3.6E-06 1.2E-10 68.5 12.0 73 6-86 1-74 (218)
339 3fi9_A Malate dehydrogenase; s 98.3 7.5E-07 2.5E-11 77.2 6.1 118 3-129 6-128 (343)
340 3fwz_A Inner membrane protein 98.3 2.9E-06 1E-10 63.8 8.4 73 5-86 7-80 (140)
341 3tnl_A Shikimate dehydrogenase 98.2 5.2E-06 1.8E-10 71.0 9.6 84 3-88 152-237 (315)
342 3pqe_A L-LDH, L-lactate dehydr 98.2 1.5E-05 5.2E-10 68.6 12.5 119 1-129 1-124 (326)
343 1pqw_A Polyketide synthase; ro 98.2 4.1E-06 1.4E-10 67.0 7.6 97 4-129 38-139 (198)
344 2z2v_A Hypothetical protein PH 98.2 2.1E-05 7.1E-10 69.0 12.6 72 4-86 15-86 (365)
345 2hcy_A Alcohol dehydrogenase 1 98.1 4.4E-06 1.5E-10 73.1 7.6 75 4-87 169-248 (347)
346 2aef_A Calcium-gated potassium 98.1 1.5E-05 5.1E-10 65.5 9.4 71 5-86 9-80 (234)
347 3tl2_A Malate dehydrogenase; c 98.0 7.2E-05 2.5E-09 64.0 12.3 116 1-128 4-128 (315)
348 1pzg_A LDH, lactate dehydrogen 98.0 9.9E-05 3.4E-09 63.8 13.1 116 4-127 8-132 (331)
349 1jay_A Coenzyme F420H2:NADP+ o 98.0 3.2E-06 1.1E-10 68.4 3.5 73 6-86 1-73 (212)
350 2eez_A Alanine dehydrogenase; 98.0 2.4E-05 8.1E-10 68.9 9.2 75 3-87 164-239 (369)
351 1y6j_A L-lactate dehydrogenase 97.9 7.5E-05 2.6E-09 64.2 11.4 111 4-126 6-122 (318)
352 1ur5_A Malate dehydrogenase; o 97.9 0.00013 4.4E-09 62.5 12.2 113 5-129 2-120 (309)
353 1v3u_A Leukotriene B4 12- hydr 97.9 3.3E-05 1.1E-09 67.0 8.5 74 4-86 145-223 (333)
354 3t4e_A Quinate/shikimate dehyd 97.9 3.8E-05 1.3E-09 65.6 8.6 84 3-88 146-231 (312)
355 3l9w_A Glutathione-regulated p 97.9 6E-05 2E-09 67.2 10.0 74 4-86 3-77 (413)
356 1jw9_B Molybdopterin biosynthe 97.9 7.7E-05 2.6E-09 61.8 9.7 106 4-129 30-155 (249)
357 4h7p_A Malate dehydrogenase; s 97.9 4.4E-05 1.5E-09 66.0 8.3 176 4-198 23-210 (345)
358 3gvi_A Malate dehydrogenase; N 97.8 0.00022 7.6E-09 61.2 12.4 116 3-129 5-126 (324)
359 1qor_A Quinone oxidoreductase; 97.8 2E-05 6.9E-10 68.2 6.0 74 4-86 140-218 (327)
360 1nyt_A Shikimate 5-dehydrogena 97.8 2.3E-05 7.8E-10 65.9 6.2 76 3-89 117-192 (271)
361 3vku_A L-LDH, L-lactate dehydr 97.8 0.00012 3.9E-09 63.0 10.2 113 4-128 8-126 (326)
362 2nqt_A N-acetyl-gamma-glutamyl 97.8 1.7E-05 6E-10 68.9 5.0 100 4-131 8-114 (352)
363 1wly_A CAAR, 2-haloacrylate re 97.8 2.5E-05 8.7E-10 67.7 5.8 75 4-87 145-224 (333)
364 3p7m_A Malate dehydrogenase; p 97.8 0.00031 1.1E-08 60.3 12.1 116 3-128 3-123 (321)
365 1oju_A MDH, malate dehydrogena 97.7 0.00031 1.1E-08 59.5 11.3 167 6-197 1-173 (294)
366 3d0o_A L-LDH 1, L-lactate dehy 97.7 0.00045 1.5E-08 59.3 12.4 115 3-127 4-123 (317)
367 2j3h_A NADP-dependent oxidored 97.7 6.4E-05 2.2E-09 65.5 7.1 74 4-86 155-234 (345)
368 2j8z_A Quinone oxidoreductase; 97.7 9E-05 3.1E-09 64.8 8.0 75 4-87 162-241 (354)
369 3hhp_A Malate dehydrogenase; M 97.7 0.00032 1.1E-08 59.9 11.2 173 6-196 1-177 (312)
370 2hjs_A USG-1 protein homolog; 97.7 0.00015 5.2E-09 62.8 9.3 94 5-130 6-102 (340)
371 1yb5_A Quinone oxidoreductase; 97.7 8.7E-05 3E-09 64.8 7.8 74 4-86 170-248 (351)
372 3jyo_A Quinate/shikimate dehyd 97.7 8.6E-05 2.9E-09 62.6 7.4 80 3-88 125-205 (283)
373 4f3y_A DHPR, dihydrodipicolina 97.7 6.4E-05 2.2E-09 62.9 6.5 99 3-129 5-105 (272)
374 3h8v_A Ubiquitin-like modifier 97.7 0.00045 1.5E-08 58.2 11.4 106 4-128 35-170 (292)
375 1ldn_A L-lactate dehydrogenase 97.6 0.00061 2.1E-08 58.5 12.2 118 1-128 1-124 (316)
376 2zb4_A Prostaglandin reductase 97.6 0.00016 5.4E-09 63.3 8.7 72 6-86 162-239 (357)
377 2egg_A AROE, shikimate 5-dehyd 97.6 8.2E-05 2.8E-09 63.3 6.4 77 3-89 139-216 (297)
378 4aj2_A L-lactate dehydrogenase 97.6 0.00073 2.5E-08 58.1 12.3 117 4-129 18-138 (331)
379 2ozp_A N-acetyl-gamma-glutamyl 97.6 0.00014 4.9E-09 63.1 7.9 97 4-129 3-101 (345)
380 4b7c_A Probable oxidoreductase 97.6 0.00016 5.4E-09 62.8 8.2 75 4-87 149-228 (336)
381 1lnq_A MTHK channels, potassiu 97.6 0.0002 6.9E-09 62.1 8.6 69 6-85 116-185 (336)
382 2x0j_A Malate dehydrogenase; o 97.6 0.00084 2.9E-08 56.7 11.6 112 6-128 1-119 (294)
383 3oj0_A Glutr, glutamyl-tRNA re 97.5 3.4E-05 1.1E-09 58.2 2.6 70 5-87 21-90 (144)
384 3pi7_A NADH oxidoreductase; gr 97.5 0.00069 2.4E-08 59.0 11.4 95 6-129 166-265 (349)
385 2eih_A Alcohol dehydrogenase; 97.5 0.0001 3.5E-09 64.2 6.0 97 4-129 166-267 (343)
386 1ez4_A Lactate dehydrogenase; 97.5 0.00066 2.3E-08 58.2 10.8 111 6-128 6-122 (318)
387 4g65_A TRK system potassium up 97.5 0.00021 7.3E-09 64.6 8.0 72 5-85 3-76 (461)
388 1pjc_A Protein (L-alanine dehy 97.5 9.4E-05 3.2E-09 64.8 5.5 75 4-87 166-240 (361)
389 3ldh_A Lactate dehydrogenase; 97.5 0.0017 5.8E-08 55.7 13.0 116 4-129 20-140 (330)
390 3nep_X Malate dehydrogenase; h 97.5 0.0014 4.8E-08 56.0 12.4 114 6-128 1-119 (314)
391 4dup_A Quinone oxidoreductase; 97.5 0.0003 1E-08 61.5 8.5 75 4-87 167-245 (353)
392 2cdc_A Glucose dehydrogenase g 97.5 0.00023 8E-09 62.5 7.7 75 4-87 180-256 (366)
393 2v6b_A L-LDH, L-lactate dehydr 97.5 0.00077 2.6E-08 57.5 10.6 111 6-128 1-117 (304)
394 3qwb_A Probable quinone oxidor 97.5 0.00048 1.6E-08 59.7 9.4 75 4-87 148-227 (334)
395 1nvt_A Shikimate 5'-dehydrogen 97.5 2.3E-05 8E-10 66.5 1.0 80 2-89 125-205 (287)
396 1jvb_A NAD(H)-dependent alcoho 97.5 0.00025 8.5E-09 61.8 7.6 75 4-87 170-250 (347)
397 3gms_A Putative NADPH:quinone 97.5 0.00043 1.5E-08 60.1 8.9 75 4-87 144-223 (340)
398 3jyn_A Quinone oxidoreductase; 97.5 0.00024 8.2E-09 61.3 7.2 75 4-87 140-219 (325)
399 3gxh_A Putative phosphatase (D 97.5 7.6E-05 2.6E-09 57.2 3.6 74 14-87 25-107 (157)
400 4eye_A Probable oxidoreductase 97.4 0.00048 1.6E-08 59.9 9.0 76 4-87 159-237 (342)
401 3orq_A N5-carboxyaminoimidazol 97.4 0.00044 1.5E-08 61.0 8.8 70 3-83 10-79 (377)
402 3k96_A Glycerol-3-phosphate de 97.4 9.6E-05 3.3E-09 64.6 4.5 83 1-85 25-107 (356)
403 1zud_1 Adenylyltransferase THI 97.4 0.00065 2.2E-08 56.2 9.2 106 4-129 27-152 (251)
404 4e4t_A Phosphoribosylaminoimid 97.4 0.00035 1.2E-08 62.5 8.0 69 3-82 33-101 (419)
405 1iz0_A Quinone oxidoreductase; 97.4 0.00023 8E-09 60.7 6.6 74 4-87 125-198 (302)
406 2vhw_A Alanine dehydrogenase; 97.4 0.00033 1.1E-08 61.7 7.7 76 3-87 166-241 (377)
407 2hjr_A Malate dehydrogenase; m 97.4 0.0032 1.1E-07 54.2 13.3 114 5-129 14-133 (328)
408 1t2d_A LDH-P, L-lactate dehydr 97.4 0.0019 6.6E-08 55.5 11.9 117 4-129 3-128 (322)
409 2vns_A Metalloreductase steap3 97.4 0.00044 1.5E-08 55.9 7.4 66 4-86 27-92 (215)
410 3dr3_A N-acetyl-gamma-glutamyl 97.4 0.0013 4.6E-08 56.6 10.8 102 4-130 3-109 (337)
411 1xyg_A Putative N-acetyl-gamma 97.4 0.0004 1.4E-08 60.6 7.3 98 5-130 16-115 (359)
412 2d8a_A PH0655, probable L-thre 97.4 0.00046 1.6E-08 60.2 7.8 97 4-129 167-269 (348)
413 2zqz_A L-LDH, L-lactate dehydr 97.3 0.0016 5.4E-08 56.0 10.7 113 4-128 8-126 (326)
414 2ewd_A Lactate dehydrogenase,; 97.3 0.0028 9.7E-08 54.3 12.3 117 1-129 1-123 (317)
415 1p77_A Shikimate 5-dehydrogena 97.3 0.00015 5E-09 61.0 4.1 75 3-88 117-191 (272)
416 1rjw_A ADH-HT, alcohol dehydro 97.3 0.0006 2.1E-08 59.1 8.0 97 4-129 164-263 (339)
417 1p9o_A Phosphopantothenoylcyst 97.3 0.00057 2E-08 58.0 7.5 36 4-39 35-89 (313)
418 1hyh_A L-hicdh, L-2-hydroxyiso 97.3 0.002 7E-08 55.0 11.0 113 5-127 1-122 (309)
419 2ew2_A 2-dehydropantoate 2-red 97.3 0.0002 6.8E-09 61.4 4.5 35 4-39 2-36 (316)
420 4huj_A Uncharacterized protein 97.3 0.00014 4.7E-09 59.1 3.3 38 3-41 21-59 (220)
421 4a0s_A Octenoyl-COA reductase/ 97.3 0.0025 8.7E-08 57.4 12.0 35 4-38 220-254 (447)
422 1lld_A L-lactate dehydrogenase 97.3 0.0037 1.3E-07 53.6 12.5 106 4-119 6-115 (319)
423 1guz_A Malate dehydrogenase; o 97.2 0.0039 1.3E-07 53.3 12.3 114 6-128 1-119 (310)
424 2xxj_A L-LDH, L-lactate dehydr 97.2 0.003 1E-07 53.9 11.4 111 6-128 1-117 (310)
425 3q2o_A Phosphoribosylaminoimid 97.2 0.0016 5.3E-08 57.7 9.9 69 3-82 12-80 (389)
426 2o7s_A DHQ-SDH PR, bifunctiona 97.2 9.1E-05 3.1E-09 68.2 1.8 73 3-88 362-435 (523)
427 1ys4_A Aspartate-semialdehyde 97.2 0.0012 4.1E-08 57.6 8.8 34 5-38 8-42 (354)
428 2c0c_A Zinc binding alcohol de 97.2 0.00056 1.9E-08 60.0 6.7 97 4-129 163-263 (362)
429 3don_A Shikimate dehydrogenase 97.2 0.00028 9.4E-09 59.2 4.5 70 3-87 115-185 (277)
430 3qy9_A DHPR, dihydrodipicolina 97.2 0.00035 1.2E-08 57.4 5.0 34 4-38 2-36 (243)
431 4e12_A Diketoreductase; oxidor 97.2 0.00055 1.9E-08 57.8 6.2 36 4-40 3-38 (283)
432 1p9l_A Dihydrodipicolinate red 97.2 0.0019 6.4E-08 53.1 9.1 72 6-86 1-78 (245)
433 2r00_A Aspartate-semialdehyde 97.2 0.0006 2.1E-08 58.9 6.3 95 4-130 2-99 (336)
434 3gaz_A Alcohol dehydrogenase s 97.2 0.00069 2.4E-08 58.9 6.8 73 4-86 150-225 (343)
435 1yqd_A Sinapyl alcohol dehydro 97.2 0.0011 3.8E-08 58.1 8.1 75 4-87 187-261 (366)
436 1e3j_A NADP(H)-dependent ketos 97.1 0.0051 1.7E-07 53.5 12.2 76 4-87 168-250 (352)
437 3c24_A Putative oxidoreductase 97.1 0.00046 1.6E-08 58.3 5.3 67 4-86 10-76 (286)
438 3gg2_A Sugar dehydrogenase, UD 97.1 0.00028 9.5E-09 63.6 4.1 78 6-87 3-88 (450)
439 2rir_A Dipicolinate synthase, 97.1 0.0015 5.2E-08 55.6 8.5 72 2-87 154-225 (300)
440 2pv7_A T-protein [includes: ch 97.1 0.001 3.4E-08 56.6 7.3 36 4-39 20-55 (298)
441 3ijp_A DHPR, dihydrodipicolina 97.1 0.0015 5.3E-08 54.7 7.9 96 4-125 20-117 (288)
442 3pef_A 6-phosphogluconate dehy 97.1 0.00099 3.4E-08 56.3 6.9 64 6-85 2-65 (287)
443 7mdh_A Protein (malate dehydro 97.1 0.0077 2.6E-07 52.5 12.5 177 4-198 31-217 (375)
444 3pwz_A Shikimate dehydrogenase 97.1 0.0028 9.4E-08 53.0 9.4 74 3-88 118-192 (272)
445 3pwk_A Aspartate-semialdehyde 97.1 0.001 3.4E-08 58.0 6.8 94 5-130 2-98 (366)
446 3d4o_A Dipicolinate synthase s 97.1 0.0018 6E-08 55.0 8.2 71 2-86 152-222 (293)
447 1a5z_A L-lactate dehydrogenase 97.1 0.0052 1.8E-07 52.7 11.2 112 6-128 1-117 (319)
448 2vn8_A Reticulon-4-interacting 97.1 0.002 6.7E-08 56.7 8.8 74 4-87 183-258 (375)
449 3ax6_A Phosphoribosylaminoimid 97.0 0.0022 7.4E-08 56.5 8.9 70 5-85 1-70 (380)
450 1gpj_A Glutamyl-tRNA reductase 97.0 0.0012 4.1E-08 58.7 7.2 72 3-87 165-237 (404)
451 3m6i_A L-arabinitol 4-dehydrog 97.0 0.012 4E-07 51.5 13.4 77 4-87 179-262 (363)
452 2ep5_A 350AA long hypothetical 97.0 0.00068 2.3E-08 59.0 5.4 33 4-36 3-36 (350)
453 1y81_A Conserved hypothetical 97.0 0.0035 1.2E-07 46.6 8.5 88 4-129 13-103 (138)
454 3h5n_A MCCB protein; ubiquitin 97.0 0.003 1E-07 55.0 9.1 106 4-128 117-242 (353)
455 3rui_A Ubiquitin-like modifier 97.0 0.0027 9.3E-08 54.5 8.6 81 4-85 33-147 (340)
456 2h78_A Hibadh, 3-hydroxyisobut 97.0 0.0007 2.4E-08 57.7 5.0 67 4-86 2-68 (302)
457 3p2y_A Alanine dehydrogenase/p 97.0 0.0016 5.6E-08 56.8 7.2 75 4-87 183-275 (381)
458 3doj_A AT3G25530, dehydrogenas 97.0 0.0015 5.2E-08 55.8 7.0 66 4-85 20-85 (310)
459 3o8q_A Shikimate 5-dehydrogena 97.0 0.004 1.4E-07 52.3 9.3 74 3-88 124-198 (281)
460 2b5w_A Glucose dehydrogenase; 96.9 0.0022 7.5E-08 56.0 8.0 75 5-87 173-252 (357)
461 1kjq_A GART 2, phosphoribosylg 96.9 0.0036 1.2E-07 55.3 9.4 74 1-85 7-82 (391)
462 1l7d_A Nicotinamide nucleotide 96.9 0.0042 1.4E-07 54.8 9.6 73 4-85 171-265 (384)
463 3fbg_A Putative arginate lyase 96.9 0.0025 8.5E-08 55.4 8.1 75 4-87 150-227 (346)
464 4g65_A TRK system potassium up 96.9 0.007 2.4E-07 54.7 11.2 100 5-129 235-335 (461)
465 2i6t_A Ubiquitin-conjugating e 96.9 0.0095 3.3E-07 50.6 11.5 112 4-129 13-127 (303)
466 3phh_A Shikimate dehydrogenase 96.9 0.0047 1.6E-07 51.4 9.3 66 5-88 118-183 (269)
467 2ph5_A Homospermidine synthase 96.9 0.0037 1.3E-07 56.0 9.1 95 5-129 13-114 (480)
468 3k5i_A Phosphoribosyl-aminoimi 96.9 0.0026 8.8E-08 56.6 8.1 70 4-83 23-92 (403)
469 1piw_A Hypothetical zinc-type 96.9 0.0018 6E-08 56.7 7.0 74 4-87 179-253 (360)
470 1y8q_A Ubiquitin-like 1 activa 96.9 0.0045 1.6E-07 53.7 9.4 105 4-129 35-159 (346)
471 1bg6_A N-(1-D-carboxylethyl)-L 96.9 0.0014 4.8E-08 57.2 6.3 35 4-39 3-37 (359)
472 2dpo_A L-gulonate 3-dehydrogen 96.9 0.0015 5E-08 56.1 6.2 37 3-40 4-40 (319)
473 3qha_A Putative oxidoreductase 96.9 0.00085 2.9E-08 57.0 4.6 65 5-86 15-79 (296)
474 4dio_A NAD(P) transhydrogenase 96.9 0.0044 1.5E-07 54.6 9.1 75 4-87 189-285 (405)
475 3p2o_A Bifunctional protein fo 96.9 0.0032 1.1E-07 52.5 7.8 57 2-87 157-213 (285)
476 3g0o_A 3-hydroxyisobutyrate de 96.9 0.0035 1.2E-07 53.4 8.3 36 4-40 6-41 (303)
477 3pp8_A Glyoxylate/hydroxypyruv 96.9 0.0038 1.3E-07 53.3 8.5 68 2-87 136-203 (315)
478 1uuf_A YAHK, zinc-type alcohol 96.8 0.0029 9.8E-08 55.5 7.9 74 4-87 194-267 (369)
479 3tqh_A Quinone oxidoreductase; 96.8 0.0029 9.9E-08 54.4 7.6 74 4-87 152-225 (321)
480 3qsg_A NAD-binding phosphogluc 96.8 0.0014 4.8E-08 56.1 5.4 70 3-86 22-92 (312)
481 1u8x_X Maltose-6'-phosphate gl 96.8 0.0014 4.9E-08 59.1 5.7 120 4-128 27-171 (472)
482 2dq4_A L-threonine 3-dehydroge 96.8 0.0043 1.5E-07 53.8 8.6 73 4-87 164-241 (343)
483 4ffl_A PYLC; amino acid, biosy 96.8 0.004 1.4E-07 54.4 8.5 70 5-85 1-71 (363)
484 3vtf_A UDP-glucose 6-dehydroge 96.8 0.0042 1.4E-07 55.5 8.5 35 4-39 20-54 (444)
485 3obb_A Probable 3-hydroxyisobu 96.8 0.011 3.7E-07 50.2 10.8 103 4-124 2-119 (300)
486 3l6d_A Putative oxidoreductase 96.8 0.0016 5.6E-08 55.5 5.7 67 4-86 8-74 (306)
487 3pdu_A 3-hydroxyisobutyrate de 96.8 0.00081 2.8E-08 56.9 3.8 66 5-86 1-66 (287)
488 1mv8_A GMD, GDP-mannose 6-dehy 96.8 0.0079 2.7E-07 54.0 10.4 33 6-39 1-33 (436)
489 3ggo_A Prephenate dehydrogenas 96.8 0.0021 7.2E-08 55.0 6.2 69 3-86 31-103 (314)
490 3hg7_A D-isomer specific 2-hyd 96.8 0.0032 1.1E-07 54.0 7.3 68 2-87 137-204 (324)
491 4a26_A Putative C-1-tetrahydro 96.8 0.0038 1.3E-07 52.4 7.5 57 2-87 162-220 (300)
492 3krt_A Crotonyl COA reductase; 96.7 0.0034 1.2E-07 56.8 7.7 45 4-51 228-272 (456)
493 4dgs_A Dehydrogenase; structur 96.7 0.0042 1.4E-07 53.6 7.9 65 2-87 168-232 (340)
494 3jtm_A Formate dehydrogenase, 96.7 0.0051 1.7E-07 53.4 8.4 70 2-87 161-230 (351)
495 3two_A Mannitol dehydrogenase; 96.7 0.0023 8E-08 55.6 6.4 69 4-87 176-244 (348)
496 1y8q_B Anthracycline-, ubiquit 96.7 0.0056 1.9E-07 57.0 9.1 106 5-129 17-142 (640)
497 2h6e_A ADH-4, D-arabinose 1-de 96.7 0.0028 9.5E-08 55.0 6.7 74 4-87 170-248 (344)
498 3gqv_A Enoyl reductase; medium 96.7 0.019 6.5E-07 50.3 12.2 74 4-87 164-241 (371)
499 3u62_A Shikimate dehydrogenase 96.7 0.0037 1.3E-07 51.7 7.1 68 4-87 108-176 (253)
500 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.0063 2.2E-07 49.1 8.1 72 2-85 28-99 (223)
No 1
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=1.6e-49 Score=352.25 Aligned_cols=308 Identities=16% Similarity=0.082 Sum_probs=243.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHH-HHHHHhhccCC--CCCeEEEEccCCCHhHHHHHhcCC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDER-ETAHLKALEGA--DTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
.+++|+|||||||||||++|+++|+++|++|++++|+..... ....+...... ..+++++.+|++|.+++.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 356799999999999999999999999999999999765322 22222221000 047899999999999999999999
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.+++.... ..+++|+++..|.
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~----~~~~~E~~~~~p~----- 172 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHP----ALPKVEENIGNPL----- 172 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC----CSSBCTTCCCCCC-----
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCC----CCCCccCCCCCCC-----
Confidence 9999999975444444567788999999999999999999999999999995544332 5688999887664
Q ss_pred CCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCCC-c--cCcCCCcccHHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDV 232 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~ 232 (323)
+.|+.+|.++|.+++.+++++|++++++||+++|||+..... .....++..+..+.+.. . +...++|+|++|+
T Consensus 173 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 173 -SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence 789999999999999999888999999999999999865431 23445667777787665 3 3456779999999
Q ss_pred HHHHHHhhcC--CCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCC-----CCCCCCCCCccccccchhH-hhhCCcc-
Q 020608 233 ALAHILVYEN--PSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPR-----LPKDTQPGLLRTKDGAKKL-MDLGLQF- 302 (323)
Q Consensus 233 a~~~~~~~~~--~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~lG~~~- 302 (323)
|++++.++.. ...++.||++ ++.+|+.|+++.+.+.+|...... .............+|++|+ +.|||+|
T Consensus 252 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 331 (351)
T 3ruf_A 252 IQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPN 331 (351)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCC
T ss_pred HHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCC
Confidence 9999999987 2345569985 788999999999999987522111 1111223344678999999 7799999
Q ss_pred cCHHHHHHHHHHHHHHc
Q 020608 303 IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 303 ~~~~~~l~~~~~~~~~~ 319 (323)
++++++|+++++|++++
T Consensus 332 ~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 332 IKIREGLRLSMPWYVRF 348 (351)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 89999999999999875
No 2
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=100.00 E-value=1.2e-48 Score=344.66 Aligned_cols=320 Identities=38% Similarity=0.668 Sum_probs=234.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|..++|+|||||||||||++|+++|+++|++|+++.|+++.......+..+.....+++++.+|++|.+++.++++++|+
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 77788999999999999999999999999999999998754333222222211112578899999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhh--cc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC--RQ 157 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~ 157 (323)
|||+|+.... ...+.....+++|+.++.+++++|++.+ +++|||+||.+++++.... ..+++|+.+...... ..
T Consensus 81 Vih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~ 157 (337)
T 2c29_D 81 VFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ--LPVYDESCWSDMEFCRAKK 157 (337)
T ss_dssp EEECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC--CSEECTTCCCCHHHHHHHC
T ss_pred EEEeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC--CcccCcccCCchhhhcccC
Confidence 9999986522 1223334689999999999999998877 8999999999767764321 346788766443221 11
Q ss_pred -CCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC-cCCCcccHHHHHHH
Q 020608 158 -NEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN-FFMGSVHFKDVALA 235 (323)
Q Consensus 158 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~i~v~D~a~~ 235 (323)
+.+.|+.||.++|.+++.+++++|++++++||++||||..................|....++. ....|+|++|+|++
T Consensus 158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a 237 (337)
T 2c29_D 158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNA 237 (337)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHH
Confidence 2346999999999999998877899999999999999986543222111111123443322211 12339999999999
Q ss_pred HHHhhcCCCCCccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhHhhhCCcc-cCHHHHHHHHHH
Q 020608 236 HILVYENPSACGRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVE 314 (323)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~ 314 (323)
++.+++++...+.|+++++.+|+.|+++.+.+.++...+|..............+|++|+++|||+| ++++++|+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~ 317 (337)
T 2c29_D 238 HIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVD 317 (337)
T ss_dssp HHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred HHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHH
Confidence 9999987666678988877899999999999988654444322222223345678999998899999 899999999999
Q ss_pred HHHHcCCCC
Q 020608 315 SLKAKGFIS 323 (323)
Q Consensus 315 ~~~~~~~~~ 323 (323)
|+++++.++
T Consensus 318 ~~~~~~~~~ 326 (337)
T 2c29_D 318 TCRAKGLLP 326 (337)
T ss_dssp HHHHTTSSC
T ss_pred HHHHcCCCC
Confidence 999998764
No 3
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=5.2e-49 Score=348.20 Aligned_cols=308 Identities=18% Similarity=0.151 Sum_probs=237.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC-
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG- 77 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~- 77 (323)
|.++||+|||||||||||++|+++|+++| ++|++++|....... ..+..+. ...+++++.+|++|.+.+.+++++
T Consensus 20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~ 97 (346)
T 4egb_A 20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL-NNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKER 97 (346)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG-GGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch-hhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence 34577999999999999999999999999 788888776422111 1122111 135899999999999999999986
Q ss_pred -CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhc
Q 020608 78 -CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCR 156 (323)
Q Consensus 78 -~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 156 (323)
+|+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.+++..... ..+++|+++..|.
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~---~~~~~E~~~~~p~--- 171 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGK---TGRFTEETPLAPN--- 171 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCS---SCCBCTTSCCCCC---
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCc---CCCcCCCCCCCCC---
Confidence 999999999876655667788899999999999999999999999999999955544322 5688998887664
Q ss_pred cCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHH
Q 020608 157 QNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVA 233 (323)
Q Consensus 157 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a 233 (323)
+.|+.+|.++|.+++.++.+++++++++||+.+|||+.... .....++..+..+.+.. . +...++|||++|+|
T Consensus 172 ---~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 247 (346)
T 4egb_A 172 ---SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHC 247 (346)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHH
T ss_pred ---ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHH
Confidence 77999999999999999988899999999999999987543 34445667777787655 3 34566799999999
Q ss_pred HHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCC-CCCCCCCCCCCccccccchhH-hhhCCcc-cCHHHHH
Q 020608 234 LAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDI-PRLPKDTQPGLLRTKDGAKKL-MDLGLQF-IPMDQII 309 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l 309 (323)
++++.+++++..++.||++ ++.+++.|+++.+.+.+|.... .............+.+|++|+ ++|||+| ++++++|
T Consensus 248 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l 327 (346)
T 4egb_A 248 SAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGL 327 (346)
T ss_dssp HHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHH
T ss_pred HHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHH
Confidence 9999999987766679986 5679999999999999975321 111122223344578999999 7899999 8999999
Q ss_pred HHHHHHHHHcC
Q 020608 310 KDSVESLKAKG 320 (323)
Q Consensus 310 ~~~~~~~~~~~ 320 (323)
+++++|+++++
T Consensus 328 ~~~~~~~~~~~ 338 (346)
T 4egb_A 328 QETVQWYEKNE 338 (346)
T ss_dssp HHHHHHHHHCH
T ss_pred HHHHHHHHhhh
Confidence 99999999864
No 4
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=2.5e-48 Score=338.85 Aligned_cols=291 Identities=14% Similarity=0.111 Sum_probs=235.6
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|||||||||||++|+++|+++|++|++++|++.... + .+++++.+|++ .+++.++++++|+|||+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA----I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc----C-------CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence 589999999999999999999999999999999832211 1 16889999999 99999999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+..... ++...+++|+.++.+++++|++.++++|||+||.++ |+... ..+++|+++..|. +.|+.
T Consensus 70 a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~v-yg~~~---~~~~~E~~~~~p~------~~Y~~ 135 (311)
T 3m2p_A 70 AATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISA-YSDET---SLPWNEKELPLPD------LMYGV 135 (311)
T ss_dssp CCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG-CCCGG---GCSBCTTSCCCCS------SHHHH
T ss_pred cccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHH-hCCCC---CCCCCCCCCCCCC------chhHH
Confidence 9975442 667799999999999999999999999999999844 44432 4678998877664 77999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHHHHHHHhhc
Q 020608 165 SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVALAHILVYE 241 (323)
Q Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a~~~~~~~~ 241 (323)
+|.++|.+++.++.+++++++++||+.+|||..... .....++..+..|.+.. . ++..++|+|++|+|++++.+++
T Consensus 136 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~ 214 (311)
T 3m2p_A 136 SKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALK 214 (311)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHh
Confidence 999999999999988999999999999999987543 34445667777777665 2 4455679999999999999999
Q ss_pred CCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCC-CCCCCccccccchhH-hhhCCcc-cCHHHHHHHHHHHHH
Q 020608 242 NPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKD-TQPGLLRTKDGAKKL-MDLGLQF-IPMDQIIKDSVESLK 317 (323)
Q Consensus 242 ~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~ 317 (323)
++..++.||++ ++.+|+.|+++.+.+.+|........+. .........+|++|+ +.|||+| ++++++|+++++|++
T Consensus 215 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~ 294 (311)
T 3m2p_A 215 QEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMR 294 (311)
T ss_dssp CTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHC
T ss_pred cCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHH
Confidence 87766779985 7789999999999999975321111121 223445688999999 6699999 799999999999999
Q ss_pred HcCCC
Q 020608 318 AKGFI 322 (323)
Q Consensus 318 ~~~~~ 322 (323)
+++..
T Consensus 295 ~~~~~ 299 (311)
T 3m2p_A 295 GLDDV 299 (311)
T ss_dssp C----
T ss_pred hcccC
Confidence 88754
No 5
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=100.00 E-value=2.9e-48 Score=342.39 Aligned_cols=315 Identities=34% Similarity=0.568 Sum_probs=227.6
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
+|+|||||||||||++|+++|+++|++|+++.|+.++......+..+. ...+++++.+|++|.+++.++++++|+|||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 589999999999999999999999999999999765422222222222 1236889999999999999999999999999
Q ss_pred ccCCccCCCCCch-hhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhh--hccCCC
Q 020608 85 ASPCIVDKVEDPQ-NQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEY--CRQNEI 160 (323)
Q Consensus 85 a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~ 160 (323)
|+.... ...++ .+.+++|+.++.+++++|++.+ +++|||+||.+++++........+++|+.+..+.. +..+..
T Consensus 88 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 165 (338)
T 2rh8_A 88 ATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT 165 (338)
T ss_dssp SSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred CCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence 986532 22223 4589999999999999999885 89999999987555332110023677876543221 111112
Q ss_pred -chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc--------CcCCCcccHHH
Q 020608 161 -WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE--------NFFMGSVHFKD 231 (323)
Q Consensus 161 -~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~i~v~D 231 (323)
.|+.||.++|.+++.+++++|++++++||+++|||............+.....|.+..++ .+.++|+|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~D 245 (338)
T 2rh8_A 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED 245 (338)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHH
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHH
Confidence 599999999999999887789999999999999998654322222222222344322111 12347999999
Q ss_pred HHHHHHHhhcCCCCCccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhHhhhCCcc-cCHHHHHH
Q 020608 232 VALAHILVYENPSACGRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIK 310 (323)
Q Consensus 232 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~ 310 (323)
+|++++.+++++...+.||++++.+|+.|+++.+.+.++...+|...... .......+|++|+++|||+| ++++++|+
T Consensus 246 va~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lG~~p~~~l~~gl~ 324 (338)
T 2rh8_A 246 VCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDF-PPKSKLIISSEKLVKEGFSFKYGIEEIYD 324 (338)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTS-CSSCSCCCCCHHHHHHTCCCSCCHHHHHH
T ss_pred HHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCC-CcCcceeechHHHHHhCCCCCCCHHHHHH
Confidence 99999999987666678998877899999999999988754444322221 11223788999997799999 89999999
Q ss_pred HHHHHHHHcCCCC
Q 020608 311 DSVESLKAKGFIS 323 (323)
Q Consensus 311 ~~~~~~~~~~~~~ 323 (323)
++++|+++++.++
T Consensus 325 ~~~~~~~~~~~~~ 337 (338)
T 2rh8_A 325 ESVEYFKAKGLLQ 337 (338)
T ss_dssp HHHHHHHHTTCC-
T ss_pred HHHHHHHHcCCCC
Confidence 9999999998764
No 6
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=100.00 E-value=7.7e-48 Score=337.35 Aligned_cols=313 Identities=34% Similarity=0.534 Sum_probs=229.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEec-CCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVK-NLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+|+|||||||||||++|+++|+++|++|+++.| ++++......+..+.....+++++.+|++|.++++++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 579999999999999999999999999999988 5422111111222211112578889999999999999999999999
Q ss_pred cccCCccCCCCCc-hhhhhhHHHHHHHHHHHHHhhC-CcCEEEEecccccccCCCCCCCCccccCCCCCChhhh--ccCC
Q 020608 84 LASPCIVDKVEDP-QNQLLNPAVKGTVNVLTAAKAL-GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC--RQNE 159 (323)
Q Consensus 84 ~a~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~~ 159 (323)
+|+... ....+ ....+++|+.++.+++++|++. ++++|||+||.+++++.... ..+++|+++....++ ..+.
T Consensus 81 ~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~ 156 (322)
T 2p4h_X 81 TASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPF 156 (322)
T ss_dssp CCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCT
T ss_pred cCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCcc
Confidence 997531 22222 3458999999999999999987 78999999999766654321 346788776543221 1122
Q ss_pred C-chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHH
Q 020608 160 I-WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHIL 238 (323)
Q Consensus 160 ~-~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~ 238 (323)
+ .|+.||.++|.++..+++++|++++++||+++|||............+.....|....++....+|+|++|+|++++.
T Consensus 157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~ 236 (322)
T 2p4h_X 157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIY 236 (322)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHH
Confidence 3 599999999999999887789999999999999997653322222222233445433333333479999999999999
Q ss_pred hhcCCCCCccEEEEcCccCHHHHHHHHHHHCCCCCCCCC--CCCCCCCCccccccchhHhhhCCcc-cCHHHHHHHHHHH
Q 020608 239 VYENPSACGRHLCVEAISHYGDFVAKVAELYPEYDIPRL--PKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVES 315 (323)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~~ 315 (323)
+++++...|.||++++.+|+.|+++.+.+.++...+|.. .... .......+|++|+++|||+| ++++++|+++++|
T Consensus 237 ~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~ 315 (322)
T 2p4h_X 237 LLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEI-KGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQC 315 (322)
T ss_dssp HHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTC-CCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred HhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCC-CCCcceecccHHHHHhCCccCCCHHHHHHHHHHH
Confidence 998765566799778889999999999998865444432 1111 11245788999997799999 8999999999999
Q ss_pred HHHcCCC
Q 020608 316 LKAKGFI 322 (323)
Q Consensus 316 ~~~~~~~ 322 (323)
+++++.+
T Consensus 316 ~~~~~~~ 322 (322)
T 2p4h_X 316 CKEKGYL 322 (322)
T ss_dssp HHHHTCC
T ss_pred HHhcCCC
Confidence 9998864
No 7
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=3.1e-47 Score=336.19 Aligned_cols=306 Identities=17% Similarity=0.122 Sum_probs=236.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHH-HHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERE-TAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 80 (323)
++|+|||||||||||++++++|+++|++|++++|+...... ...+.... +.+++++.+|++|.+++.++++ ++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 56899999999999999999999999999999997654322 12222211 3478899999999999999998 8999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+|+........+.+...+++|+.++.++++++++.++++||++||.++ |+... ..+++|+.+..+. +
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~-~g~~~---~~~~~e~~~~~~~------~ 151 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATV-YGVPE---RSPIDETFPLSAT------N 151 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG-BCSCS---SSSBCTTSCCBCS------S
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceE-ecCCC---CCCCCCCCCCCCC------C
Confidence 999999764433344566789999999999999999999899999999855 44433 5678888876654 7
Q ss_pred chHHHHHHHHHHHHHHHHhCC-ccEEEEcCCCccCCCCCC------C--CchhHHHHHHHHcCC--CCC---------cc
Q 020608 161 WYPLSKTLAEKAAWEFAKEKG-LDVVVVNPGTVMGPVIPP------T--LNASMLMLLRLLQGC--TDT---------YE 220 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~-~~~~~~Rp~~v~G~~~~~------~--~~~~~~~~~~~~~g~--~~~---------~~ 220 (323)
.|+.+|.++|.+++.++.+++ ++++++||+++|||.... . .......+.....+. +.. .+
T Consensus 152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 231 (341)
T 3enk_A 152 PYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDG 231 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTS
T ss_pred hhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCC
Confidence 799999999999999988875 999999999999996421 0 112222344444443 211 23
Q ss_pred CcCCCcccHHHHHHHHHHhhcC---CCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-
Q 020608 221 NFFMGSVHFKDVALAHILVYEN---PSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL- 295 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~---~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (323)
.+.++|+|++|+|++++.++++ ...++.||++ ++.+|+.|+++.+.+.+|........+........+.+|++|+
T Consensus 232 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~ 311 (341)
T 3enk_A 232 TGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAA 311 (341)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHH
T ss_pred CeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHH
Confidence 4567799999999999999986 2345679984 7889999999999999875321111222223445678999999
Q ss_pred hhhCCcc-cCHHHHHHHHHHHHHHcCC
Q 020608 296 MDLGLQF-IPMDQIIKDSVESLKAKGF 321 (323)
Q Consensus 296 ~~lG~~~-~~~~~~l~~~~~~~~~~~~ 321 (323)
++|||+| ++++++|+++++|++++..
T Consensus 312 ~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 312 ETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 7899999 9999999999999999864
No 8
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=4.2e-47 Score=331.47 Aligned_cols=294 Identities=19% Similarity=0.155 Sum_probs=228.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|||||||||||++|+++|+++| .++++.+....... . ...+++++.+|+++ +++.++++++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-----~---~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-----F---VNEAARLVKADLAA-DDIKDYLKGAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-----G---SCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-----h---cCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence 5799999999999999999999999 45555543322111 1 13478899999999 8899999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+......+..++...+++|+.++.++++++++.++++|||+||.++| +... ..+++|+.+..|. +.|+.
T Consensus 71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vy-g~~~---~~~~~E~~~~~~~------~~Y~~ 140 (313)
T 3ehe_A 71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVY-GEAK---VIPTPEDYPTHPI------SLYGA 140 (313)
T ss_dssp CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGG-CSCS---SSSBCTTSCCCCC------SHHHH
T ss_pred CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHh-CcCC---CCCCCCCCCCCCC------CHHHH
Confidence 997655556778899999999999999999999888999999998554 4433 5678888776554 77999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC-CC-Cc--cCcCCCcccHHHHHHHHHHhh
Q 020608 165 SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC-TD-TY--ENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~-~~--~~~~~~~i~v~D~a~~~~~~~ 240 (323)
+|.++|.+++.++.++|++++++||+++|||+... .....++.++..+. +. .. +.+.++|+|++|+|++++.++
T Consensus 141 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 218 (313)
T 3ehe_A 141 SKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGL 218 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHh
Confidence 99999999999998899999999999999998653 33445566666663 32 23 445678999999999999999
Q ss_pred cCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCC---CCCCCccccccchhHhhhCCcc-cCHHHHHHHHHHH
Q 020608 241 ENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKD---TQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVES 315 (323)
Q Consensus 241 ~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~~ 315 (323)
+....++.||++ ++++|+.|+++.+.+.+|..+....... .........+|++|+++|||+| ++++++|+++++|
T Consensus 219 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~ 298 (313)
T 3ehe_A 219 RGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRD 298 (313)
T ss_dssp TCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHH
T ss_pred ccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 965556679975 6789999999999999975321111111 1122334678999998899999 8999999999999
Q ss_pred HHHcC
Q 020608 316 LKAKG 320 (323)
Q Consensus 316 ~~~~~ 320 (323)
++++.
T Consensus 299 ~~~~~ 303 (313)
T 3ehe_A 299 LVEDL 303 (313)
T ss_dssp HHHHH
T ss_pred HHhCc
Confidence 99864
No 9
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=5.5e-47 Score=336.00 Aligned_cols=307 Identities=16% Similarity=0.088 Sum_probs=237.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcH-HHHHHHh-hccC-CCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDE-RETAHLK-ALEG-ADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
++||+|||||||||||++|+++|+++|++|++++|+.... .....+. .+.. ...+++++.+|++|.+++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999976431 1222111 1110 01478999999999999999999999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.+++.... ..+++|+++..|.
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~----~~~~~E~~~~~~~------ 174 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHP----GLPKVEDTIGKPL------ 174 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC----CSSBCTTCCCCCC------
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCC----CCCCCCCCCCCCC------
Confidence 999999975432233456788999999999999999999999999999996654432 4578888876554
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCCC-cc--CcCCCcccHHHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTDT-YE--NFFMGSVHFKDVA 233 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~-~~--~~~~~~i~v~D~a 233 (323)
+.|+.+|.++|.+++.++.+++++++++||+.+|||...... .....++..+..|.+.. .+ +..++|+|++|+|
T Consensus 175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (352)
T 1sb8_A 175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254 (352)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence 779999999999999998888999999999999999865331 22334556667777654 33 4456799999999
Q ss_pred HHHHHhhcCC--CCCccEEEE-cCccCHHHHHHHHHHHC---CCCCC--CCCCCCCCCCCccccccchhH-hhhCCcc-c
Q 020608 234 LAHILVYENP--SACGRHLCV-EAISHYGDFVAKVAELY---PEYDI--PRLPKDTQPGLLRTKDGAKKL-MDLGLQF-I 303 (323)
Q Consensus 234 ~~~~~~~~~~--~~~~~~~~~-~~~~~~~e~~~~i~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~ 303 (323)
++++.++... ..++.||++ ++.+|+.|+++.+.+.+ |.... +.+.+..........+|++|+ ++|||+| +
T Consensus 255 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 334 (352)
T 1sb8_A 255 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKY 334 (352)
T ss_dssp HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred HHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCC
Confidence 9999988762 245569985 67899999999999998 54221 111111122334568899999 7799999 8
Q ss_pred CHHHHHHHHHHHHHHc
Q 020608 304 PMDQIIKDSVESLKAK 319 (323)
Q Consensus 304 ~~~~~l~~~~~~~~~~ 319 (323)
+++++|+++++|++++
T Consensus 335 ~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 335 DVSAGVALAMPWYIMF 350 (352)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 10
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=4.7e-47 Score=330.95 Aligned_cols=294 Identities=23% Similarity=0.212 Sum_probs=233.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|+|||||||||||++|+++|+++|++|++++|+....... ...+++++.+|++|.+ +.+++++ |+|||+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF--------VNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG--------SCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh--------cCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence 5899999999999999999999999999999876432211 1347899999999998 8888888 9999999
Q ss_pred cCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHH
Q 020608 86 SPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLS 165 (323)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s 165 (323)
+.........++...+++|+.++.+++++|++.++++|||+||.+++. ... ..+++|+.+..|. +.|+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg-~~~---~~~~~e~~~~~p~------~~Y~~s 140 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG-DAD---VIPTPEEEPYKPI------SVYGAA 140 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC-SCS---SSSBCTTSCCCCC------SHHHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhC-CCC---CCCCCCCCCCCCC------ChHHHH
Confidence 976555566778889999999999999999999999999999995544 332 5678888776654 779999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC--Cc--cCcCCCcccHHHHHHHHHHhhc
Q 020608 166 KTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD--TY--ENFFMGSVHFKDVALAHILVYE 241 (323)
Q Consensus 166 K~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~~i~v~D~a~~~~~~~~ 241 (323)
|.++|.+++.++.+++++++++||+++|||+... .....++.++..+... .. +...++|+|++|+|++++.+++
T Consensus 141 K~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 218 (312)
T 3ko8_A 141 KAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWK 218 (312)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHH
Confidence 9999999999998889999999999999998653 2344456666666432 23 3456789999999999999998
Q ss_pred C----CCCCccEEEE-cCccCHHHHHHHHHHHCCCCC----CCCCCCC--CCCCCccccccchhH-hhhCCcc-cCHHHH
Q 020608 242 N----PSACGRHLCV-EAISHYGDFVAKVAELYPEYD----IPRLPKD--TQPGLLRTKDGAKKL-MDLGLQF-IPMDQI 308 (323)
Q Consensus 242 ~----~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~ 308 (323)
+ ...++.||++ ++.+|+.|+++.+.+.++... +|..... .........+|++|+ +.|||+| ++++++
T Consensus 219 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~ 298 (312)
T 3ko8_A 219 KFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEA 298 (312)
T ss_dssp HHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHH
T ss_pred hccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHH
Confidence 7 3345569985 678999999999999986432 1111100 112334578999999 8899999 899999
Q ss_pred HHHHHHHHHHcCC
Q 020608 309 IKDSVESLKAKGF 321 (323)
Q Consensus 309 l~~~~~~~~~~~~ 321 (323)
|+++++|+++++.
T Consensus 299 l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 299 VKKTAEDLAKELW 311 (312)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhc
Confidence 9999999998763
No 11
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=2.9e-46 Score=332.59 Aligned_cols=301 Identities=17% Similarity=0.116 Sum_probs=233.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHH--CCCEEEEEecCCCcHHHHH-HHhhc----cCCCCCeEEEEccCCCHhHHHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLE--RRYTVHATVKNLSDERETA-HLKAL----EGADTRLRLFQIDLLDYDAIAA 73 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~-~~~~~----~~~~~~~~~~~~Dl~~~~~~~~ 73 (323)
|++++|+|||||||||||++|+++|++ +|++|++++|+........ ..+.+ .....++.++.+|++|.+++++
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 346789999999999999999999999 9999999999765221110 00000 1113467899999999999999
Q ss_pred H-hcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCCh
Q 020608 74 A-VTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDE 152 (323)
Q Consensus 74 ~-~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~ 152 (323)
+ ..++|+|||+|+.... +..++...+++|+.++.+++++|++.+++ |||+||. .+|+.. ..+++|+++..|
T Consensus 86 ~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~-~vyg~~----~~~~~E~~~~~p 157 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSA-GVYGNT----KAPNVVGKNESP 157 (362)
T ss_dssp HTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEG-GGGCSC----CSSBCTTSCCCC
T ss_pred hhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcH-HHhCCC----CCCCCCCCCCCC
Confidence 8 7899999999996543 45678889999999999999999999876 9999998 455544 338889887766
Q ss_pred hhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCCC-cc--CcCCCc
Q 020608 153 EYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTDT-YE--NFFMGS 226 (323)
Q Consensus 153 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~-~~--~~~~~~ 226 (323)
. +.|+.+|.++|.+++.++.+ ++++++||+++|||+..... .....++..+..+.+.. .+ ...++|
T Consensus 158 ~------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (362)
T 3sxp_A 158 E------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDF 229 (362)
T ss_dssp S------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEEC
T ss_pred C------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEcc
Confidence 4 78999999999999988754 89999999999999865321 23445666777777644 23 355679
Q ss_pred ccHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCC-CCCCccccccchhH-hhhCCcc-
Q 020608 227 VHFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDT-QPGLLRTKDGAKKL-MDLGLQF- 302 (323)
Q Consensus 227 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~lG~~~- 302 (323)
+|++|+|++++.+++.+.. |.||++ ++++++.|+++.+.+.+|...+. ..+.. ........+|++|+ +.|||+|
T Consensus 230 i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 307 (362)
T 3sxp_A 230 VYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLGDFKVT-YIKNPYAFFQKHTQAHIEPTILDLDYTPL 307 (362)
T ss_dssp EEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHCCCEEE-CCC-------CCCCBCCHHHHHHHCCCCC
T ss_pred EEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcCCCceE-ECCCCCcCcccceecCHHHHHHHhCCCCC
Confidence 9999999999999998755 489984 77899999999999999832211 11111 23345678999999 8899999
Q ss_pred cCHHHHHHHHHHHHHHc
Q 020608 303 IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 303 ~~~~~~l~~~~~~~~~~ 319 (323)
++++++|+++++|++++
T Consensus 308 ~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 308 YDLESGIKDYLPHIHAI 324 (362)
T ss_dssp CCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 89999999999999765
No 12
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=5e-46 Score=327.78 Aligned_cols=303 Identities=21% Similarity=0.190 Sum_probs=231.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++|+|||||||||||++|+++|+++| ++|++++|...... .+.+..+.. ..+++++.+|++|.+.+.+++.++|+|
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v 79 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN-PANLKDLED-DPRYTFVKGDVADYELVKELVRKVDGV 79 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc-hhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence 45789999999999999999999986 89999998642111 111122211 347899999999999999999999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCc-CEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGV-KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
||+|+......+..++...+++|+.++.+++++|.+.+. ++|||+||.++ |+... ..+++|+++..+. +
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v-yg~~~---~~~~~E~~~~~~~------~ 149 (336)
T 2hun_A 80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEV-YGDIL---KGSFTENDRLMPS------S 149 (336)
T ss_dssp EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGG-GCCCS---SSCBCTTBCCCCC------S
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHH-HCCCC---CCCcCCCCCCCCC------C
Confidence 999997543223345678899999999999999988764 79999999955 44332 4578888766543 6
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-cc--CcCCCcccHHHHHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YE--NFFMGSVHFKDVALAHI 237 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~i~v~D~a~~~~ 237 (323)
.|+.+|.++|.+++.++.+++++++++||+.+|||..... .....++..+..+.+.. ++ ....+|+|++|+|++++
T Consensus 150 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 228 (336)
T 2hun_A 150 PYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE 228 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence 7999999999999999988899999999999999986432 23334556666776544 23 34567999999999999
Q ss_pred HhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC-CCCCCCCCCCCCccccccchhH-hhhCCcc-cCHHHHHHHHH
Q 020608 238 LVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD-IPRLPKDTQPGLLRTKDGAKKL-MDLGLQF-IPMDQIIKDSV 313 (323)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l~~~~ 313 (323)
.++++...++.||++ ++.+|+.|+++.+.+.+|... ..............+.+|++|+ +.|||+| ++++++|++++
T Consensus 229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~ 308 (336)
T 2hun_A 229 LVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTI 308 (336)
T ss_dssp HHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHH
T ss_pred HHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 999866555679986 567999999999999997532 1111111112223467899999 7799999 89999999999
Q ss_pred HHHHHc
Q 020608 314 ESLKAK 319 (323)
Q Consensus 314 ~~~~~~ 319 (323)
+|++++
T Consensus 309 ~~~~~~ 314 (336)
T 2hun_A 309 DWYLKN 314 (336)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999875
No 13
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=6.7e-46 Score=328.49 Aligned_cols=307 Identities=17% Similarity=0.167 Sum_probs=233.3
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|+ +||+|||||||||||++|+++|+++ |++|++++|+...... ..+..+. ..+++++.+|++|.+++.++++++
T Consensus 1 Ms-~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~ 76 (348)
T 1oc2_A 1 MS-QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK-ANLEAIL--GDRVELVVGDIADAELVDKLAAKA 76 (348)
T ss_dssp ---CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG-GGTGGGC--SSSEEEEECCTTCHHHHHHHHTTC
T ss_pred CC-cCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh-hHHhhhc--cCCeEEEECCCCCHHHHHHHhhcC
Confidence 54 4789999999999999999999998 8999999997532111 1112221 247899999999999999999999
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCC--------CCCCccccCCCCC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPK--------WPADKVKDEDCWT 150 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--------~~~~~~~~e~~~~ 150 (323)
|+|||+|+......+..++...+++|+.++.+++++|.+.++ +|||+||.+++..... .....+++|+++.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 999999997543222345678899999999999999998887 9999999955433211 0012577887765
Q ss_pred ChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcc
Q 020608 151 DEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSV 227 (323)
Q Consensus 151 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i 227 (323)
.+. +.|+.+|.++|.+++.++.+++++++++||+.+|||+.... .....++..+..+.+.. . +...++|+
T Consensus 156 ~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 228 (348)
T 1oc2_A 156 NPS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWI 228 (348)
T ss_dssp CCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECE
T ss_pred CCC------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeE
Confidence 543 77999999999999999888899999999999999986432 23334556666776554 2 33456799
Q ss_pred cHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC-CCCCCCCCCCCCccccccchhH-hhhCCcc-c
Q 020608 228 HFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD-IPRLPKDTQPGLLRTKDGAKKL-MDLGLQF-I 303 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~ 303 (323)
|++|+|++++.+++.+..++.||++ ++.+++.|+++.+.+.+|... ...+..........+.+|++|+ +.|||+| +
T Consensus 229 ~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 308 (348)
T 1oc2_A 229 HTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQF 308 (348)
T ss_dssp EHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSC
T ss_pred EHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCC
Confidence 9999999999999866555579985 578999999999999997532 1111111222234567899999 7799999 7
Q ss_pred C-HHHHHHHHHHHHHHc
Q 020608 304 P-MDQIIKDSVESLKAK 319 (323)
Q Consensus 304 ~-~~~~l~~~~~~~~~~ 319 (323)
+ ++++|+++++|++++
T Consensus 309 ~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 309 TDFSEGLEETIQWYTDN 325 (348)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHh
Confidence 7 999999999999875
No 14
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.7e-47 Score=338.94 Aligned_cols=304 Identities=16% Similarity=0.188 Sum_probs=233.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCC-CHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLL-DYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~ 80 (323)
|+||+|||||||||||++|+++|+++ |++|++++|+....... .. ..+++++.+|++ |.+.+.++++++|+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~------~~-~~~v~~~~~Dl~~d~~~~~~~~~~~d~ 94 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL------VK-HERMHFFEGDITINKEWVEYHVKKCDV 94 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG------GG-STTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh------cc-CCCeEEEeCccCCCHHHHHHHhccCCE
Confidence 56899999999999999999999998 99999999986443211 10 247999999999 99999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhh-ccCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC-RQNE 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~ 159 (323)
|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++ |+... ..+++|+++..+..+ ..+.
T Consensus 95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~v-yg~~~---~~~~~e~~~~~~~~p~~~p~ 169 (372)
T 3slg_A 95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEV-YGMCA---DEQFDPDASALTYGPINKPR 169 (372)
T ss_dssp EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGG-GBSCC---CSSBCTTTCCEEECCTTCTT
T ss_pred EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHH-hCCCC---CCCCCccccccccCCCCCCC
Confidence 999999765433345667889999999999999999988 99999999854 54433 557777775421111 1233
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC-------CchhHHHHHHHHcCCCCC-c--cCcCCCcccH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT-------LNASMLMLLRLLQGCTDT-Y--ENFFMGSVHF 229 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v 229 (323)
+.|+.+|.++|.+++.++.+ +++++++||+++|||+.... ......++..+..|.+.. . ++..++|+|+
T Consensus 170 ~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 248 (372)
T 3slg_A 170 WIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 248 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEH
T ss_pred CcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEH
Confidence 57999999999999999877 99999999999999986531 223445667777887655 3 3456679999
Q ss_pred HHHHHHHHHhhcCCC---CCccEEEEc--CccCHHHHHHHHHHHCCCCCC----CCCC-----------CCCCCCCcccc
Q 020608 230 KDVALAHILVYENPS---ACGRHLCVE--AISHYGDFVAKVAELYPEYDI----PRLP-----------KDTQPGLLRTK 289 (323)
Q Consensus 230 ~D~a~~~~~~~~~~~---~~~~~~~~~--~~~~~~e~~~~i~~~~~~~~~----~~~~-----------~~~~~~~~~~~ 289 (323)
+|+|++++.+++++. .++.||+++ +.+|+.|+++.+.+.+|.... +... ...........
T Consensus 249 ~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (372)
T 3slg_A 249 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRV 328 (372)
T ss_dssp HHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCC
T ss_pred HHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceee
Confidence 999999999999864 456699865 589999999999998853210 0000 00001334568
Q ss_pred ccchhH-hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 290 DGAKKL-MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 290 ~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 329 ~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 329 PKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp BCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 899999 7799999 89999999999999765
No 15
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-45 Score=324.84 Aligned_cols=297 Identities=18% Similarity=0.176 Sum_probs=228.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 82 (323)
||+|||||||||||++|+++|+++|++|++++|+..... +.+ ..+++++.+|++|.+.+.++++ ++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-----DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-----GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-----hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 579999999999999999999999999999998754321 112 1268899999999999999998 899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+......+..++...+++|+.++.+++++|++.++++|||+||.++ |+... ..+++|+++..+. +.|
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~~~~---~~~~~E~~~~~~~------~~Y 142 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAAT-YGEVD---VDLITEETMTNPT------NTY 142 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG-GCSCS---SSSBCTTSCCCCS------SHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCcee-eCCCC---CCCCCcCCCCCCC------ChH
Confidence 9999754322234567889999999999999999999999999999855 44332 5678998876554 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC-------CchhHHHHHHHHcCC--CCC---------ccCcCC
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT-------LNASMLMLLRLLQGC--TDT---------YENFFM 224 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~g~--~~~---------~~~~~~ 224 (323)
+.+|.++|.+++.++.+++++++++||+++|||+.... .......+.+...+. +.. .++..+
T Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 222 (330)
T 2c20_A 143 GETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIR 222 (330)
T ss_dssp HHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeE
Confidence 99999999999999888899999999999999963210 112222233333332 221 233456
Q ss_pred CcccHHHHHHHHHHhhcCCC---CCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCccccccchhH-hhh
Q 020608 225 GSVHFKDVALAHILVYENPS---ACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRL-PKDTQPGLLRTKDGAKKL-MDL 298 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~l 298 (323)
+|+|++|+|++++.+++++. .++.||++ ++.+|+.|+++.+.+.+|.. ++.. .+..........+|++|+ +.|
T Consensus 223 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~l 301 (330)
T 2c20_A 223 DYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE-IPAEVAPRRAGDPARLVASSQKAKEKL 301 (330)
T ss_dssp CEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC-CCEEEECCCSSCCSEECBCCHHHHHHH
T ss_pred eeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCCcccccccCHHHHHHHh
Confidence 79999999999999987542 24579975 67899999999999999742 2211 111122334678999999 789
Q ss_pred CCcc-c-CHHHHHHHHHHHHHHcC
Q 020608 299 GLQF-I-PMDQIIKDSVESLKAKG 320 (323)
Q Consensus 299 G~~~-~-~~~~~l~~~~~~~~~~~ 320 (323)
||+| + +++++|+++++|++++.
T Consensus 302 G~~p~~~~l~~~l~~~~~~~~~~~ 325 (330)
T 2c20_A 302 GWDPRYVNVKTIIEHAWNWHQKQP 325 (330)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCccCCHHHHHHHHHHHHHHhh
Confidence 9999 6 99999999999999874
No 16
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=3.7e-46 Score=330.09 Aligned_cols=291 Identities=20% Similarity=0.185 Sum_probs=231.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++|+|||||||||||++|+++|+++|++|++++|++.. .+++++.+|++|.+.+.++++++|+||
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVL 82 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence 457899999999999999999999999999999998643 267889999999999999999999999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+.... ....+...+++|+.++.+++++|++.++++|||+||.++|..... ...+++|+++..+. +.|
T Consensus 83 h~A~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~--~~~~~~E~~~~~~~------~~Y 152 (347)
T 4id9_A 83 HLGAFMSW--APADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRP--EFLPVTEDHPLCPN------SPY 152 (347)
T ss_dssp ECCCCCCS--SGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSC--SSSSBCTTSCCCCC------SHH
T ss_pred ECCcccCc--chhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCC--CCCCcCCCCCCCCC------ChH
Confidence 99997543 223447899999999999999999999999999999955443211 15678998876654 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCcc-------------CCCCCCC----------CchhHHHHHHHHcCCCCC-
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVM-------------GPVIPPT----------LNASMLMLLRLLQGCTDT- 218 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~-------------G~~~~~~----------~~~~~~~~~~~~~g~~~~- 218 (323)
+.+|.++|.+++.++++++++++++||+.+| ||+.... ......++..+..|.+..
T Consensus 153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (347)
T 4id9_A 153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI 232 (347)
T ss_dssp HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence 9999999999999998899999999999999 7753321 223334555666676644
Q ss_pred c--cCcCCCc----ccHHHHHHHHHHhhcCC-CCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccc
Q 020608 219 Y--ENFFMGS----VHFKDVALAHILVYENP-SACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKD 290 (323)
Q Consensus 219 ~--~~~~~~~----i~v~D~a~~~~~~~~~~-~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (323)
. +...++| +|++|+|++++.+++++ ..++.||++ ++.+|+.|+++.+.+.+|... +.... +.......+
T Consensus 233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~--p~~~~~~~~ 309 (347)
T 4id9_A 233 LARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDF--PGDGVYYHT 309 (347)
T ss_dssp EEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEEC--SSCCCBCCB
T ss_pred eCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeC--CCccccccc
Confidence 3 3456678 99999999999999987 345679985 678999999999999987531 11111 111226789
Q ss_pred cchhH-hhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 291 GAKKL-MDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 291 ~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
|++|+ +.|||+| ++++++|+++++|++++.
T Consensus 310 d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 310 SNERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 99999 7799999 899999999999998764
No 17
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=4.9e-46 Score=330.53 Aligned_cols=305 Identities=18% Similarity=0.097 Sum_probs=232.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~ 80 (323)
+++|+|||||||||||++|+++|+++|++|++++|++........ .+. ...+++++.+|++|.+++.+++++ +|+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE--TAR-VADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH--HTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH--hhc-cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 357899999999999999999999999999999997654322111 111 134789999999999999999886 899
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
|||+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++| +.... ..+++|+++..+.
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vy-g~~~~--~~~~~E~~~~~~~------ 154 (357)
T 1rkx_A 84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY-DNKEW--IWGYRENEAMGGY------ 154 (357)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB-CCCCS--SSCBCTTSCBCCS------
T ss_pred EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHh-CCCCc--CCCCCCCCCCCCC------
Confidence 999999643222344567889999999999999998876 8899999999554 43321 2467777665443
Q ss_pred CchHHHHHHHHHHHHHHHHhC---------CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc--cCcCCCccc
Q 020608 160 IWYPLSKTLAEKAAWEFAKEK---------GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY--ENFFMGSVH 228 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~---------~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~i~ 228 (323)
+.|+.+|.++|.+++.++.++ |++++++||+.+|||+..........++..+..|.+... +...++|+|
T Consensus 155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 234 (357)
T 1rkx_A 155 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH 234 (357)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence 679999999999999988764 899999999999999864333344556667777776543 445667999
Q ss_pred HHHHHHHHHHhhcC-----CCCCccEEEE---cCccCHHHHHHHHHHHCCCC-CCCCCCCCCCCCCccccccchhH-hhh
Q 020608 229 FKDVALAHILVYEN-----PSACGRHLCV---EAISHYGDFVAKVAELYPEY-DIPRLPKDTQPGLLRTKDGAKKL-MDL 298 (323)
Q Consensus 229 v~D~a~~~~~~~~~-----~~~~~~~~~~---~~~~~~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l 298 (323)
++|+|++++.++++ ...++.||++ ++.+|+.|+++.+.+.+|.. .+...............+|++|+ +.|
T Consensus 235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 314 (357)
T 1rkx_A 235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQL 314 (357)
T ss_dssp THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHh
Confidence 99999999998874 1345679986 35799999999999998642 11111111112334578999999 779
Q ss_pred CCcc-cCHHHHHHHHHHHHHHc
Q 020608 299 GLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 299 G~~~-~~~~~~l~~~~~~~~~~ 319 (323)
||+| ++++++|+++++|++++
T Consensus 315 G~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 315 GWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCcCCcHHHHHHHHHHHHHHH
Confidence 9999 89999999999999875
No 18
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=8.9e-46 Score=324.14 Aligned_cols=294 Identities=16% Similarity=0.146 Sum_probs=229.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V 81 (323)
++|+|||||||||||++|+++|+++|++|++++|+... .. + +++++.+|++|.+++.+++++ +|+|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL------P-----NVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC------T-----TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc------c-----eeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 46899999999999999999999999999999997643 11 1 678899999999999999885 9999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC-CcCEEEEecccccccCCC-CCCCCccccCCCCCChhhhccCC
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL-GVKRVVVTSSISSITPSP-KWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
||+|+........+++...+++|+.++.+++++|++. ++++|||+||.+++.... . ..+++|+++..+.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~---~~~~~E~~~~~~~------ 149 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPE---ESPVSEENQLRPM------ 149 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGG---GCSBCTTSCCBCC------
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCC---CCCCCCCCCCCCC------
Confidence 9999976543345577889999999999999999775 588999999995554321 1 5578888876554
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHc---C--CCCC-cc--CcCCCcccHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQ---G--CTDT-YE--NFFMGSVHFKD 231 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~---g--~~~~-~~--~~~~~~i~v~D 231 (323)
+.|+.+|.++|.+++.++.++|++++++||+++|||+.... .....++..+.. | .+.. .+ ...++|+|++|
T Consensus 150 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~D 228 (321)
T 2pk3_A 150 SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRD 228 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHH
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHH
Confidence 77999999999999999888899999999999999986542 222334444444 6 3332 33 34566999999
Q ss_pred HHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC-CCCCCC-CCCCCCccccccchhH-hhhCCcc-cCHH
Q 020608 232 VALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD-IPRLPK-DTQPGLLRTKDGAKKL-MDLGLQF-IPMD 306 (323)
Q Consensus 232 ~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~-~~lG~~~-~~~~ 306 (323)
+|++++.+++++..++.||++ ++.+++.|+++.+.+.+|... +...+. ..........+|++|+ +.|||+| ++++
T Consensus 229 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 308 (321)
T 2pk3_A 229 IVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLE 308 (321)
T ss_dssp HHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHH
T ss_pred HHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHH
Confidence 999999999876556679985 678999999999999997521 110110 1112234678999999 7799999 7999
Q ss_pred HHHHHHHHHHHHc
Q 020608 307 QIIKDSVESLKAK 319 (323)
Q Consensus 307 ~~l~~~~~~~~~~ 319 (323)
++|+++++|++++
T Consensus 309 e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 309 KSLFEILQSYRQA 321 (321)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999864
No 19
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=6.4e-46 Score=332.05 Aligned_cols=300 Identities=20% Similarity=0.176 Sum_probs=228.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++||+|||||||||||++|+++|+++| ++|++++|+..... ..+. ...+++++.+|++|.+.+.++++++|+|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~V 103 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK-----INVP-DHPAVRFSETSITDDALLASLQDEYDYV 103 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG-----GGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch-----hhcc-CCCceEEEECCCCCHHHHHHHhhCCCEE
Confidence 457899999999999999999999999 99999999764321 1111 1347899999999999999999999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC-CcCEEEEecccccccCCCCCCCCcccc--CCC---CC-Chhh
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL-GVKRVVVTSSISSITPSPKWPADKVKD--EDC---WT-DEEY 154 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~--e~~---~~-~~~~ 154 (323)
||+|+......+..++...+++|+.++.+++++|++. ++++|||+||.++ |+... ..+++ |++ +. .+
T Consensus 104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v-yg~~~---~~~~~~~E~~~~~~~~~~-- 177 (377)
T 2q1s_A 104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS-IAEKT---FDDAKATEETDIVSLHNN-- 177 (377)
T ss_dssp EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCCCSSCC--
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH-cCCCC---CCCcCcccccccccccCC--
Confidence 9999975432223456789999999999999999998 8899999999854 44332 44677 776 32 22
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCC---------CCC---CchhHHHHHHHHcCCCCC-c--
Q 020608 155 CRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVI---------PPT---LNASMLMLLRLLQGCTDT-Y-- 219 (323)
Q Consensus 155 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~---------~~~---~~~~~~~~~~~~~g~~~~-~-- 219 (323)
.+.|+.+|.++|.+++.++.+++++++++||+.+|||.. ... ......++..+..+.+.. .
T Consensus 178 ----~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 253 (377)
T 2q1s_A 178 ----DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENG 253 (377)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGG
T ss_pred ----CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCC
Confidence 367999999999999999888899999999999999976 210 223445566677777654 3
Q ss_pred cCcCCCcccHHHHHHH-HHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCc-cccccchhH-
Q 020608 220 ENFFMGSVHFKDVALA-HILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLL-RTKDGAKKL- 295 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~-~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 295 (323)
++..++|+|++|+|++ ++.+++++.. |.||++ ++.+|+.|+++.+.+.+|........+....... ...+|++|+
T Consensus 254 g~~~~~~i~v~Dva~a~i~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~ 332 (377)
T 2q1s_A 254 GVATRDFIFVEDVANGLIACAADGTPG-GVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKAR 332 (377)
T ss_dssp GCCEECCEEHHHHHHHHHHHHHHCCTT-EEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHH
T ss_pred CCeEEeeEEHHHHHHHHHHHHHhcCCC-CeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHH
Confidence 3456789999999999 9999987654 489975 5789999999999999875321111111112223 678899999
Q ss_pred hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 296 MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 296 ~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
++|||+| ++++++|+++++|++++
T Consensus 333 ~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 333 RELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 7899999 89999999999999875
No 20
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.2e-45 Score=323.38 Aligned_cols=301 Identities=17% Similarity=0.165 Sum_probs=227.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++|+|||||||||||++|+++|+++|++|++++|++.+... +. ..+++++.+|++|.+++.++++++|+|||
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------l~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR------LA--YLEPECRVAEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG------GG--GGCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh------hc--cCCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 34699999999999999999999999999999998654321 11 12688999999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+... ....++...+++|+.++.+++++|++.++++|||+||.+++...... ..+ +|+++..|... ..+.|+
T Consensus 84 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~~~-~E~~~~~p~~~--~~~~Y~ 156 (342)
T 2x4g_A 84 SAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG--LPG-HEGLFYDSLPS--GKSSYV 156 (342)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS--SCB-CTTCCCSSCCT--TSCHHH
T ss_pred CCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC--CCC-CCCCCCCcccc--ccChHH
Confidence 999643 23456778999999999999999999888999999999665433210 134 88887665100 136799
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCC-CCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVI-PPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+|.++|.+++.++.+ |++++++||+.+|||.. ... ...++..+..|.+...+++.++|+|++|+|++++.++++
T Consensus 157 ~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 232 (342)
T 2x4g_A 157 LCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALER 232 (342)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhC
Confidence 9999999999998876 99999999999999976 321 223455666676544466677899999999999999987
Q ss_pred CCCCccEEEEcCccCHHHHHHHHHHHCCCCC---CCCCC---------------C-------C-CCCCCccccccchhH-
Q 020608 243 PSACGRHLCVEAISHYGDFVAKVAELYPEYD---IPRLP---------------K-------D-TQPGLLRTKDGAKKL- 295 (323)
Q Consensus 243 ~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~---~~~~~---------------~-------~-~~~~~~~~~~~~~~~- 295 (323)
+..++.||+++..+|+.|+++.+.+.+|... +|.+. . . .........+|++|+
T Consensus 233 ~~~g~~~~v~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 312 (342)
T 2x4g_A 233 GRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAR 312 (342)
T ss_dssp SCTTCEEEECCEEEEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHH
T ss_pred CCCCceEEEcCCcccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHH
Confidence 6665679986433999999999999886431 11110 0 0 000123567899999
Q ss_pred hhhCC-cccCHHHHHHHHHHHHHHcCCCC
Q 020608 296 MDLGL-QFIPMDQIIKDSVESLKAKGFIS 323 (323)
Q Consensus 296 ~~lG~-~~~~~~~~l~~~~~~~~~~~~~~ 323 (323)
+.||| +|++++++|+++++|++++++++
T Consensus 313 ~~lG~~~p~~~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 313 EELGFFSTTALDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp HHHCCCCCSCHHHHHHHHHHHHHHTTCCC
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 77999 99999999999999999999875
No 21
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=100.00 E-value=8.5e-46 Score=322.88 Aligned_cols=295 Identities=24% Similarity=0.248 Sum_probs=228.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 83 (323)
|+|||||||||||++++++|+++|++|++++|...... ..+ ..+++++.+|++|.+++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-----~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-----ENV---PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-----GGS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-----hhc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 48999999999999999999999999999988542211 111 1357788999999999999988 8999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCC-CCCCCCccccCCCCCChhhhccCCCch
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPS-PKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
+|+......+..++...+++|+.++.+++++|++.++++||++||.+.+|+. .. ..+++|+++..|. +.|
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~---~~~~~E~~~~~~~------~~Y 143 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE---GERAEETWPPRPK------SPY 143 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT---TCCBCTTSCCCCC------SHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC---CCCcCCCCCCCCC------ChH
Confidence 9987543223345677899999999999999999888999999998445543 22 4567888765543 679
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC--chhHHHHHHHHcCCCCC-c-----cC--cCCCcccHHHH
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL--NASMLMLLRLLQGCTDT-Y-----EN--FFMGSVHFKDV 232 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~--~~~~~~~~~~~~g~~~~-~-----~~--~~~~~i~v~D~ 232 (323)
+.+|.++|.+++.++.+++++++++||+++|||+..... .....++.++..+.+.. . ++ ..++|+|++|+
T Consensus 144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 223 (311)
T 2p5y_A 144 AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDV 223 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHH
Confidence 999999999999998888999999999999999865432 12334455566676543 3 33 45679999999
Q ss_pred HHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhHhhhCCcc-cCHHHHHH
Q 020608 233 ALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIK 310 (323)
Q Consensus 233 a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~ 310 (323)
|++++.+++.+ ++.||++ ++.+|+.|+++.+.+.+|........+..........+|++|+++|||+| ++++++|+
T Consensus 224 a~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~ 301 (311)
T 2p5y_A 224 AEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIR 301 (311)
T ss_dssp HHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHH
T ss_pred HHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHH
Confidence 99999998764 5679985 67899999999999998642111111111223346789999993399999 99999999
Q ss_pred HHHHHHHHc
Q 020608 311 DSVESLKAK 319 (323)
Q Consensus 311 ~~~~~~~~~ 319 (323)
++++|++++
T Consensus 302 ~~~~~~~~~ 310 (311)
T 2p5y_A 302 LTVDHFRGA 310 (311)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 999999764
No 22
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=1.8e-45 Score=324.29 Aligned_cols=301 Identities=23% Similarity=0.213 Sum_probs=232.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHC---C---CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER---R---YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
|+|||||||||||++|+++|+++ | ++|++++|+...... ..+..+.. ..+++++.+|++|.+.+.+++.++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAPVDA-DPRLRFVHGDIRDAGLLARELRGVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGGGTT-CTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhhhccc-CCCeEEEEcCCCCHHHHHHHhcCCC
Confidence 48999999999999999999997 8 999999986521111 11122211 3478999999999999999999999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
+|||+|+......+..++...+++|+.++.+++++|++.++++|||+||.+++ +... ..+++|+++..+.
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vy-g~~~---~~~~~E~~~~~~~------ 148 (337)
T 1r6d_A 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY-GSID---SGSWTESSPLEPN------ 148 (337)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG-CCCS---SSCBCTTSCCCCC------
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHh-CCCC---CCCCCCCCCCCCC------
Confidence 99999997543222345677899999999999999999998999999999554 4332 4577888766553
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-cc--CcCCCcccHHHHHHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YE--NFFMGSVHFKDVALAH 236 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~i~v~D~a~~~ 236 (323)
+.|+.+|.++|.+++.++.+++++++++||+.+|||..... .....++..+..+.+.. .+ ...++|+|++|+|+++
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 227 (337)
T 1r6d_A 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence 77999999999999999888899999999999999986432 23334556666776544 23 3456799999999999
Q ss_pred HHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC-CCCCCCCCCCCCccccccchhH-hhhCCcc-cCHHHHHHHH
Q 020608 237 ILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD-IPRLPKDTQPGLLRTKDGAKKL-MDLGLQF-IPMDQIIKDS 312 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l~~~ 312 (323)
+.+++++..++.||++ ++.+|+.|+++.+.+.+|... ...+..........+.+|++|+ +.|||+| ++++++|+++
T Consensus 228 ~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~ 307 (337)
T 1r6d_A 228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLART 307 (337)
T ss_dssp HHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 9999866555679986 567999999999999987531 1111111112223467899999 7799999 8999999999
Q ss_pred HHHHHHc
Q 020608 313 VESLKAK 319 (323)
Q Consensus 313 ~~~~~~~ 319 (323)
++|++++
T Consensus 308 ~~~~~~~ 314 (337)
T 1r6d_A 308 VRWYREN 314 (337)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999875
No 23
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=3.8e-45 Score=327.19 Aligned_cols=305 Identities=13% Similarity=0.072 Sum_probs=233.3
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|..+||+|||||||||||++|+++|+++|++|++++|+....... ...+++++.+|++|.+++.++++++|+
T Consensus 25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~~d~ 96 (379)
T 2c5a_A 25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFHLVDLRVMENCLKVTEGVDH 96 (379)
T ss_dssp CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--------GGTCSEEEECCTTSHHHHHHHHTTCSE
T ss_pred ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh--------ccCCceEEECCCCCHHHHHHHhCCCCE
Confidence 345678999999999999999999999999999999976432110 023688999999999999999999999
Q ss_pred EEEcccCCccCC-CCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCC-CCCccccCCCCCChhhhccC
Q 020608 81 VFHLASPCIVDK-VEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKW-PADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 81 Vih~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~ 158 (323)
|||+|+...... ...++...+++|+.++.+++++|++.++++|||+||.+++...... +...+++|+++.. ..+
T Consensus 97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~----~~~ 172 (379)
T 2c5a_A 97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWP----AEP 172 (379)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS----BCC
T ss_pred EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCC----CCC
Confidence 999999753211 1456788999999999999999999999999999998554432110 0123567765211 123
Q ss_pred CCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCC-CC-cc--CcCCCcccHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCT-DT-YE--NFFMGSVHFKD 231 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~-~~-~~--~~~~~~i~v~D 231 (323)
.+.|+.+|.++|.+++.++.+++++++++||+.+|||...... .....++..+..+.+ .. .+ ...++|+|++|
T Consensus 173 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D 252 (379)
T 2c5a_A 173 QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDE 252 (379)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHH
Confidence 3679999999999999998888999999999999999764321 134455666666765 32 33 34677999999
Q ss_pred HHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-hhhCCcc-cCHHHH
Q 020608 232 VALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-MDLGLQF-IPMDQI 308 (323)
Q Consensus 232 ~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~ 308 (323)
+|++++.+++++ .++.||++ ++.+|+.|+++.+.+.+|... +..............+|++|+ +.|||+| ++++++
T Consensus 253 va~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~ 330 (379)
T 2c5a_A 253 CVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEG 330 (379)
T ss_dssp HHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHH
T ss_pred HHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCC-ceeeCCCCCCcccccCCHHHHHHHhCCCCCCCHHHH
Confidence 999999999876 45679985 678999999999999987421 111001111234567899999 7799999 899999
Q ss_pred HHHHHHHHHHc
Q 020608 309 IKDSVESLKAK 319 (323)
Q Consensus 309 l~~~~~~~~~~ 319 (323)
|+++++|++++
T Consensus 331 l~~~~~~~~~~ 341 (379)
T 2c5a_A 331 LRITYFWIKEQ 341 (379)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999865
No 24
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=5e-45 Score=322.92 Aligned_cols=304 Identities=20% Similarity=0.168 Sum_probs=227.8
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc-------HHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD-------ERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
+|+|||||||||||++|+++|+++|++|++++|+... ....+.+.... +.+++++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHh
Confidence 5899999999999999999999999999999986532 12222222211 2468899999999999999998
Q ss_pred -CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhh
Q 020608 77 -GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC 155 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 155 (323)
++|+|||+|+.........++...+++|+.++.++++++++.++++|||+||.+++ +... ..+++|+++..|.
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~-g~~~---~~~~~E~~~~~p~-- 153 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVY-GNPQ---YLPLDEAHPTGGC-- 153 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGG-CSCS---SSSBCTTSCCCCC--
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHh-CCCC---CCCcCCCCCCCCC--
Confidence 89999999997543223345678999999999999999999888999999998554 4332 5678898876541
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHh-CCccEEEEcCCCccCCCCC------CC---CchhHHHHHHHH-cCCCCC-c----
Q 020608 156 RQNEIWYPLSKTLAEKAAWEFAKE-KGLDVVVVNPGTVMGPVIP------PT---LNASMLMLLRLL-QGCTDT-Y---- 219 (323)
Q Consensus 156 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~Rp~~v~G~~~~------~~---~~~~~~~~~~~~-~g~~~~-~---- 219 (323)
.+.|+.+|.++|.+++.++.+ .+++++++||+++|||... .. ......++.... .+.+.. +
T Consensus 154 ---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (348)
T 1ek6_A 154 ---TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY 230 (348)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred ---CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence 267999999999999999876 2399999999999999531 10 112222333333 333322 2
Q ss_pred ----cCcCCCcccHHHHHHHHHHhhcCC--CCC-ccEEEE-cCccCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCccccc
Q 020608 220 ----ENFFMGSVHFKDVALAHILVYENP--SAC-GRHLCV-EAISHYGDFVAKVAELYPEYDIPRL-PKDTQPGLLRTKD 290 (323)
Q Consensus 220 ----~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 290 (323)
++..++|+|++|+|++++.+++++ ..+ +.||++ ++.+|+.|+++.+.+.+|.. ++.. .+..........+
T Consensus 231 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~ 309 (348)
T 1ek6_A 231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK-IPYKVVARREGDVAACYA 309 (348)
T ss_dssp SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEECB
T ss_pred cCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCccchhhcc
Confidence 334567999999999999999764 233 469985 67899999999999998642 2211 1111223346789
Q ss_pred cchhH-hhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 291 GAKKL-MDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 291 ~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
|++|+ +.|||+| ++++++|+++++|++++.
T Consensus 310 d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 341 (348)
T 1ek6_A 310 NPSLAQEELGWTAALGLDRMCEDLWRWQKQNP 341 (348)
T ss_dssp CCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence 99999 7899999 899999999999998863
No 25
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=100.00 E-value=1e-44 Score=319.30 Aligned_cols=303 Identities=17% Similarity=0.100 Sum_probs=233.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V 81 (323)
++|+|||||||||||++|+++|+++|++|++++|+...... ..+..+. ...+++++.+|++|.+++.+++++ +|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-WRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-cchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999998653211 1111111 123688999999999999999885 7999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCc-CEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGV-KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
||+|+.........++...+++|+.++.+++++|++.++ ++||++||.+++.... ..+++|+++..|. +
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~----~~~~~E~~~~~p~------~ 160 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ----AERQDENTPFYPR------S 160 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS----SSSBCTTSCCCCC------S
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC----CCCCCcccCCCCC------C
Confidence 999997544333566788999999999999999998885 8999999985544332 4578888876654 6
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCc--hhHHHHHHHHcCCCCC--cc--CcCCCcccHHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLN--ASMLMLLRLLQGCTDT--YE--NFFMGSVHFKDVAL 234 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~--~~--~~~~~~i~v~D~a~ 234 (323)
.|+.+|.++|.+++.++.+++++++++||+++|||+...... ....++..+..|.... .+ +..++|+|++|+|+
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~ 240 (335)
T 1rpn_A 161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE 240 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence 799999999999999988889999999999999997653321 1233455556676432 33 45667999999999
Q ss_pred HHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC---CCCCCC-CCCCCCccccccchhH-hhhCCcc-cCHHH
Q 020608 235 AHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD---IPRLPK-DTQPGLLRTKDGAKKL-MDLGLQF-IPMDQ 307 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~ 307 (323)
+++.+++++. .+.||++ ++.+|+.|+++.+.+.+|... ++.... ..........+|++|+ ++|||+| +++++
T Consensus 241 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 319 (335)
T 1rpn_A 241 AMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDE 319 (335)
T ss_dssp HHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred HHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHH
Confidence 9999998765 4679985 678999999999999987521 110000 1112234567899999 7799999 89999
Q ss_pred HHHHHHHHHHHc
Q 020608 308 IIKDSVESLKAK 319 (323)
Q Consensus 308 ~l~~~~~~~~~~ 319 (323)
+|+++++|++++
T Consensus 320 ~l~~~~~~~~~~ 331 (335)
T 1rpn_A 320 LIRMMVEADLRR 331 (335)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 26
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=4.6e-45 Score=322.91 Aligned_cols=308 Identities=15% Similarity=0.078 Sum_probs=225.5
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 82 (323)
||+|||||||||||++|+++|+++|++|++++|...+... .....+.. ..+++++.+|++|.+++.+++++ +|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT-DNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCF 78 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH-HHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCch-hhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence 4799999999999999999999999999999985422111 11222222 23688999999999999999987 99999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecccccccCCCCCC------------CCccccCCCC
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSISSITPSPKWP------------ADKVKDEDCW 149 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~------------~~~~~~e~~~ 149 (323)
|+|+.........++...+++|+.++.+++++|++.+++ +|||+||.+++......+ ...+++|+.+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 158 (347)
T 1orr_A 79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ 158 (347)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCC
Confidence 999975432223466789999999999999999988875 999999985544322100 0112555554
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC--chhHHHHHHHHcCC-----CCC-c--
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL--NASMLMLLRLLQGC-----TDT-Y-- 219 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~--~~~~~~~~~~~~g~-----~~~-~-- 219 (323)
..+ .+.|+.+|.++|.+++.++.++|++++++||+.+|||...... .....++.++..+. +.. .
T Consensus 159 ~~~------~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (347)
T 1orr_A 159 LDF------HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN 232 (347)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred CCC------CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecC
Confidence 433 2679999999999999998888999999999999999764321 12233444444444 332 3
Q ss_pred cCcCCCcccHHHHHHHHHHhhcC-CCC-CccEEEEcC---ccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchh
Q 020608 220 ENFFMGSVHFKDVALAHILVYEN-PSA-CGRHLCVEA---ISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKK 294 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~-~~~-~~~~~~~~~---~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
+++.++|+|++|+|++++.++++ ... +..||+++. ++|+.|+++.+.+.+|........+..........+|++|
T Consensus 233 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 312 (347)
T 1orr_A 233 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKK 312 (347)
T ss_dssp SCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHH
T ss_pred CcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHH
Confidence 34556799999999999999985 223 346998643 4899999999999987531111111122233457889999
Q ss_pred H-hhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 295 L-MDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 295 ~-~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
+ +.|||+| ++++++|+++++|++++.
T Consensus 313 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 340 (347)
T 1orr_A 313 ITNAIDWSPKVSAKDGVQKMYDWTSSIL 340 (347)
T ss_dssp HHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred HHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence 9 7899999 899999999999998874
No 27
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=320.35 Aligned_cols=294 Identities=19% Similarity=0.095 Sum_probs=223.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CT 79 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d 79 (323)
+|+||+|||||||||||++|+++|+++|+ +.... ...++++.+|++|.+.+.+++++ +|
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~d 63 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEKVQPT 63 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhhcCCC
Confidence 46789999999999999999999999998 11100 01334457999999999999986 99
Q ss_pred EEEEcccCCcc-CCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 80 GVFHLASPCIV-DKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 80 ~Vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
+|||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++ |+... ..+++|+++... +..+
T Consensus 64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~v-yg~~~---~~~~~E~~~~~~--~~~p 137 (319)
T 4b8w_A 64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCI-FPDKT---TYPIDETMIHNG--PPHN 137 (319)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGG-SCSSC---CSSBCGGGGGBS--CCCS
T ss_pred EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhh-cCCCC---CCCccccccccC--CCCC
Confidence 99999998532 12456677899999999999999999999999999999954 44433 567888763210 0111
Q ss_pred CC-chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC---CchhHHHHHH----HHcCCCCC-c--cCcCCCcc
Q 020608 159 EI-WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT---LNASMLMLLR----LLQGCTDT-Y--ENFFMGSV 227 (323)
Q Consensus 159 ~~-~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~---~~~~~~~~~~----~~~g~~~~-~--~~~~~~~i 227 (323)
.+ +|+.+|.++|.+++.++++++++++++||+++|||+.... ......++.+ +..|.+.. . +...++|+
T Consensus 138 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 217 (319)
T 4b8w_A 138 SNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFI 217 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEE
T ss_pred CcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEE
Confidence 23 4999999999999999988899999999999999986532 1223334444 56677654 3 34566799
Q ss_pred cHHHHHHHHHHhhcCCCC--CccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-hhhCCcc-
Q 020608 228 HFKDVALAHILVYENPSA--CGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-MDLGLQF- 302 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~--~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~- 302 (323)
|++|+|++++.+++++.. ++.||++ ++.+|+.|+++.+.+.+|........+..........+|++|+ +.|||.|
T Consensus 218 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 297 (319)
T 4b8w_A 218 YSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRF 297 (319)
T ss_dssp EHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred eHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCC
Confidence 999999999999987433 3458875 7889999999999999975321111122223334568999999 7799999
Q ss_pred cCHHHHHHHHHHHHHHcC
Q 020608 303 IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 303 ~~~~~~l~~~~~~~~~~~ 320 (323)
++++++|+++++|++++.
T Consensus 298 ~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 298 TPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp CCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999875
No 28
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=100.00 E-value=7.4e-46 Score=323.32 Aligned_cols=293 Identities=17% Similarity=0.175 Sum_probs=224.5
Q ss_pred CceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 80 (323)
+|+|||||||||||++|+++|+++ |++|++++|+...... . .+++++.+|++|.+++.++++ ++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV---V-------NSGPFEVVNALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH---H-------HSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc---c-------CCCceEEecCCCHHHHHHHHhhcCCCE
Confidence 478999999999999999999999 8999999998654221 1 146788999999999999998 8999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+|+..... ...++...+++|+.++.+++++|++.++++|||+||.+++..... ..+.+|+.+..|. +
T Consensus 72 vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~~~------~ 141 (312)
T 2yy7_A 72 IYLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP---KENTPQYTIMEPS------T 141 (312)
T ss_dssp EEECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC---SSSBCSSCBCCCC------S
T ss_pred EEECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC---CCCccccCcCCCC------c
Confidence 99999875331 224567789999999999999999999999999999965544321 3467777665543 7
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHH-cCCCCC--ccCcCCCcccHHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLL-QGCTDT--YENFFMGSVHFKDVAL 234 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~-~g~~~~--~~~~~~~~i~v~D~a~ 234 (323)
.|+.+|.++|.+++.++++++++++++||+.+|||...+.. ......+.... .+.... .++..++|+|++|+|+
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 221 (312)
T 2yy7_A 142 VYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAID 221 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHH
Confidence 79999999999999998888999999999999998643322 12222333333 343222 3445677999999999
Q ss_pred HHHHhhcCCCC----CccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCC--CCCccccccchhH-hhhCCcc-cCHH
Q 020608 235 AHILVYENPSA----CGRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQ--PGLLRTKDGAKKL-MDLGLQF-IPMD 306 (323)
Q Consensus 235 ~~~~~~~~~~~----~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~lG~~~-~~~~ 306 (323)
+++.+++++.. ++.||++++.+|+.|+++.+.+.+|...++....... .......+|++|+ +.|||+| ++++
T Consensus 222 a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 301 (312)
T 2yy7_A 222 ATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLE 301 (312)
T ss_dssp HHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHH
T ss_pred HHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHH
Confidence 99999987653 2579987788999999999999987433222111000 0112347899999 7799999 8999
Q ss_pred HHHHHHHHHHH
Q 020608 307 QIIKDSVESLK 317 (323)
Q Consensus 307 ~~l~~~~~~~~ 317 (323)
++|+++++|++
T Consensus 302 ~~l~~~~~~~k 312 (312)
T 2yy7_A 302 SMTKDMIEHLS 312 (312)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 29
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=100.00 E-value=1.8e-45 Score=322.04 Aligned_cols=294 Identities=17% Similarity=0.099 Sum_probs=225.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHH-HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDER-ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++|+|||||||||||++|+++|+++|++|++++|+..... ....+..+. ...+++++.+|++ ++|+|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d~v 73 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVRLV 73 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------cCCEE
Confidence 45899999999999999999999999999999999764110 000111110 0123445555554 78999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
||+|+.........++...++ |+.++.+++++|++.++++|||+||.+++... . ..+++|+++..|. +.
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~-~---~~~~~E~~~~~p~------~~ 142 (321)
T 3vps_A 74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQA-D---TLPTPEDSPLSPR------SP 142 (321)
T ss_dssp EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC-S---SSSBCTTSCCCCC------SH
T ss_pred EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCC-C---CCCCCCCCCCCCC------Ch
Confidence 999998654444555666778 99999999999999999999999999554433 2 5688998877654 77
Q ss_pred hHHHHHHHHHHHHHHHHhCCc-cEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHHHHHH
Q 020608 162 YPLSKTLAEKAAWEFAKEKGL-DVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVALAHI 237 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~-~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a~~~~ 237 (323)
|+.+|..+|.+++.++.++++ +++++||+.+|||+.... .....++..+..+.+.. . ++..++|+|++|+|++++
T Consensus 143 Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~ 221 (321)
T 3vps_A 143 YAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLV 221 (321)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHH
Confidence 999999999999999988899 999999999999987642 33445566666666544 3 445678999999999999
Q ss_pred HhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-hhhCCcc--cCHHHHHHHHH
Q 020608 238 LVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-MDLGLQF--IPMDQIIKDSV 313 (323)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~--~~~~~~l~~~~ 313 (323)
.+++++..+ .||++ ++.+|+.|+++.+. .+|........+..........+|++|+ +.|||+| ++++++|++++
T Consensus 222 ~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~ 299 (321)
T 3vps_A 222 ALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTL 299 (321)
T ss_dssp HGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHH
T ss_pred HHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHH
Confidence 999987775 99985 67899999999999 8865321111112223445678999999 7799999 89999999999
Q ss_pred HHHHHcCC
Q 020608 314 ESLKAKGF 321 (323)
Q Consensus 314 ~~~~~~~~ 321 (323)
+|+++++.
T Consensus 300 ~~~~~~~~ 307 (321)
T 3vps_A 300 EWWQSRDL 307 (321)
T ss_dssp HHHHTSCT
T ss_pred HHHHhCCC
Confidence 99998864
No 30
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=6.6e-44 Score=315.26 Aligned_cols=305 Identities=16% Similarity=0.156 Sum_probs=229.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH-hHHHHHhcCCCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY-DAIAAAVTGCTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vih 83 (323)
|+|||||||||||++|+++|+++ |++|++++|+..+... +. ...+++++.+|++|. +.++++++++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~-~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih 73 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR------FL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG------GT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH------hh-cCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence 58999999999999999999998 8999999997643211 11 124789999999984 568888899999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhh-ccCCCch
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC-RQNEIWY 162 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~Y 162 (323)
+|+.........++...+++|+.++.+++++|++.+ ++|||+||.+++ +... ..+++|+++..+..+ ..+.+.|
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~-g~~~---~~~~~e~~~~~~~~~~~~~~~~Y 148 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVY-GMCS---DKYFDEDHSNLIVGPVNKPRWIY 148 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGG-BTCC---CSSBCTTTCCCBCCCTTCGGGHH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHc-CCCC---CCCcCCcccccccCcccCccccc
Confidence 999754322234567789999999999999999988 899999998554 4332 456788775421111 1122579
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC-------CchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHH
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT-------LNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDV 232 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~ 232 (323)
+.+|..+|.+++.++++++++++++||+.+|||+.... ......++..+..|.+.. . +.+.++|+|++|+
T Consensus 149 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 228 (345)
T 2bll_A 149 SVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 228 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHH
Confidence 99999999999999888899999999999999986431 122345566677777654 3 3455679999999
Q ss_pred HHHHHHhhcCCC---CCccEEEEc-C-ccCHHHHHHHHHHHCCCCC----CCCCCCC-----------CCCCCccccccc
Q 020608 233 ALAHILVYENPS---ACGRHLCVE-A-ISHYGDFVAKVAELYPEYD----IPRLPKD-----------TQPGLLRTKDGA 292 (323)
Q Consensus 233 a~~~~~~~~~~~---~~~~~~~~~-~-~~~~~e~~~~i~~~~~~~~----~~~~~~~-----------~~~~~~~~~~~~ 292 (323)
|++++.+++++. .++.||+++ + .+|+.|+++.+.+.+|... +|..... .........+|+
T Consensus 229 a~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 308 (345)
T 2bll_A 229 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI 308 (345)
T ss_dssp HHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCC
T ss_pred HHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccH
Confidence 999999998753 345699864 4 7999999999999875421 1211100 001223567899
Q ss_pred hhH-hhhCCcc-cCHHHHHHHHHHHHHHcCCC
Q 020608 293 KKL-MDLGLQF-IPMDQIIKDSVESLKAKGFI 322 (323)
Q Consensus 293 ~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~ 322 (323)
+|+ ++|||+| ++++++|+++++|++++...
T Consensus 309 ~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 309 RNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp HHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHhcCCCccccHHHHHHHHHHHHHHcCCC
Confidence 999 7899999 89999999999999987653
No 31
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=7e-44 Score=321.09 Aligned_cols=307 Identities=18% Similarity=0.157 Sum_probs=227.7
Q ss_pred CceEEEeccccHHHHHHHHHHH-HCCCEEEEEecCCCcH---------HHHH-HHhhccCC--CCC---eEEEEccCCCH
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLL-ERRYTVHATVKNLSDE---------RETA-HLKALEGA--DTR---LRLFQIDLLDY 68 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~~-~~~~~~~~--~~~---~~~~~~Dl~~~ 68 (323)
+|+|||||||||||++|+++|+ ++|++|++++|+.... .... .+..+... ..+ ++++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 9999999999876432 1111 12222211 124 88999999999
Q ss_pred hHHHHHhc--C-CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCC----CCC
Q 020608 69 DAIAAAVT--G-CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKW----PAD 141 (323)
Q Consensus 69 ~~~~~~~~--~-~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~----~~~ 141 (323)
+.+.++++ + +|+|||+|+......+..++...+++|+.++.+++++|++.++++|||+||.++ |+.... +..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v-~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAI-FGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG-TBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHH-hCCCCcccccccc
Confidence 99999887 6 999999999754322334567899999999999999999999999999999854 443210 013
Q ss_pred ccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCC-------CCchhHHHHH-----
Q 020608 142 KVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPP-------TLNASMLMLL----- 209 (323)
Q Consensus 142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~-------~~~~~~~~~~----- 209 (323)
.+++|+++..|. +.|+.+|.++|.+++.++.+++++++++||+++|||+... ........+.
T Consensus 161 ~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 234 (397)
T 1gy8_A 161 EPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS 234 (397)
T ss_dssp CCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred cCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHH
Confidence 578888776543 7799999999999999988889999999999999996421 0111222222
Q ss_pred HHHcCCC------------CC-c--------cCcCCCcccHHHHHHHHHHhhcCCCC------C---ccEEEE-cCccCH
Q 020608 210 RLLQGCT------------DT-Y--------ENFFMGSVHFKDVALAHILVYENPSA------C---GRHLCV-EAISHY 258 (323)
Q Consensus 210 ~~~~g~~------------~~-~--------~~~~~~~i~v~D~a~~~~~~~~~~~~------~---~~~~~~-~~~~~~ 258 (323)
++..+.. .. + +.+.++|||++|+|++++.+++++.. . +.||++ ++.+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~ 314 (397)
T 1gy8_A 235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV 314 (397)
T ss_dssp HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred HHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccH
Confidence 4444432 21 2 33456799999999999999875322 2 569985 678999
Q ss_pred HHHHHHHHHHCCCCCCCCC-CCCCCCCCccccccchhH-hhhCCcc-c-CHHHHHHHHHHHHHHc
Q 020608 259 GDFVAKVAELYPEYDIPRL-PKDTQPGLLRTKDGAKKL-MDLGLQF-I-PMDQIIKDSVESLKAK 319 (323)
Q Consensus 259 ~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~lG~~~-~-~~~~~l~~~~~~~~~~ 319 (323)
.|+++.+.+.+|.. ++.. .+..........+|++|+ +.|||+| + +++++|+++++|++++
T Consensus 315 ~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 315 REVIEVARKTTGHP-IPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HHHHHHHHHHHCCC-CCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCC-CCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999998642 2211 111122334678999999 7899999 6 9999999999999887
No 32
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=100.00 E-value=4.5e-44 Score=323.04 Aligned_cols=311 Identities=19% Similarity=0.175 Sum_probs=226.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHH--------------HHHHhhcc-CCCCCeEEEEccCCCH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERE--------------TAHLKALE-GADTRLRLFQIDLLDY 68 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~~~~~-~~~~~~~~~~~Dl~~~ 68 (323)
.|++|||||||||||++|+++|+++|++|++++|....... .+.+..+. ....+++++.+|++|.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 47899999999999999999999999999999885322110 01111100 0124788999999999
Q ss_pred hHHHHHhcC--CCEEEEcccCCccCCCCCch---hhhhhHHHHHHHHHHHHHhhCCc-CEEEEecccccccCCCCCCCCc
Q 020608 69 DAIAAAVTG--CTGVFHLASPCIVDKVEDPQ---NQLLNPAVKGTVNVLTAAKALGV-KRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 69 ~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
+++.+++++ +|+|||+||.........++ ...+++|+.++.+++++|++.++ ++||++||.++ |+.. ..
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~v-yg~~----~~ 164 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE-YGTP----NI 164 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG-GCCC----SS
T ss_pred HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHH-hCCC----CC
Confidence 999999987 99999999975432222233 35789999999999999998886 59999999844 4443 23
Q ss_pred cccCCCCCChh--------hhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC--------------
Q 020608 143 VKDEDCWTDEE--------YCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT-------------- 200 (323)
Q Consensus 143 ~~~e~~~~~~~--------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~-------------- 200 (323)
+++|+.+.... .+..+.+.|+.+|.++|.+++.++.++|++++++||+.||||+....
T Consensus 165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~ 244 (404)
T 1i24_A 165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244 (404)
T ss_dssp CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence 45664211000 01123377999999999999999888899999999999999976421
Q ss_pred --CchhHHHHHHHHcCCCCC-ccC--cCCCcccHHHHHHHHHHhhcCCCCCc---cEEEEcCccCHHHHHHHHHHH---C
Q 020608 201 --LNASMLMLLRLLQGCTDT-YEN--FFMGSVHFKDVALAHILVYENPSACG---RHLCVEAISHYGDFVAKVAEL---Y 269 (323)
Q Consensus 201 --~~~~~~~~~~~~~g~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~~i~~~---~ 269 (323)
......++..+..|.+.. .++ +.++|+|++|+|++++.+++++...| .||++++++|+.|+++.+.+. +
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~ 324 (404)
T 1i24_A 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKL 324 (404)
T ss_dssp TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhh
Confidence 123445667777787653 343 45779999999999999998765434 699877789999999999997 5
Q ss_pred CCCCCCCC-CCC-CC-CCCccccccchhHhhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 270 PEYDIPRL-PKD-TQ-PGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 270 ~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
|.. ++.. .+. .. .....+.+|++|+++|||+| ++++++++++++|++...
T Consensus 325 g~~-~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~ 378 (404)
T 1i24_A 325 GLD-VKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK 378 (404)
T ss_dssp TCC-CCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred CCC-ccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhh
Confidence 432 1111 111 11 12234678999998899999 899999999999987653
No 33
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=4.3e-45 Score=314.72 Aligned_cols=272 Identities=14% Similarity=0.056 Sum_probs=215.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC-CCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG-CTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~V 81 (323)
|+||+||||| +||||++|+++|+++|++|+++.|+.+.. ..+++++.+|++|.+.+.+++++ +|+|
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 67 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEIL 67 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCEE
Confidence 3578999999 59999999999999999999999986431 24788999999999999999987 9999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
||+|+... .++...+++|+.++.+++++|++.++++|||+||.++ |+... ..+++|+++..|. +.
T Consensus 68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~v-yg~~~---~~~~~E~~~~~p~------~~ 132 (286)
T 3gpi_A 68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGV-YGQEV---EEWLDEDTPPIAK------DF 132 (286)
T ss_dssp EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGG-CCCCC---SSEECTTSCCCCC------SH
T ss_pred EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEE-EcCCC---CCCCCCCCCCCCC------Ch
Confidence 99998632 3456688899999999999999989999999999955 44432 6688999887665 77
Q ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC-CccCcCCCcccHHHHHHHHHHhh
Q 020608 162 YPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD-TYENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~i~v~D~a~~~~~~~ 240 (323)
|+.+|.++|.+ +.+ ++++++||+.+|||+.. .++..+.. ... ..++..++|+|++|+|++++.++
T Consensus 133 Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~ 198 (286)
T 3gpi_A 133 SGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLI 198 (286)
T ss_dssp HHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHH
T ss_pred hhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHH
Confidence 99999999998 542 89999999999999754 13344444 222 23455677999999999999999
Q ss_pred cC---CCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhHhhhCCcc-c-CHHHHHHHHHH
Q 020608 241 EN---PSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-I-PMDQIIKDSVE 314 (323)
Q Consensus 241 ~~---~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~-~~~~~l~~~~~ 314 (323)
++ ...++.||++ ++.+|+.|+++.+.+.+|... +..... .......+|++|+++|||+| + +++++|+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~--~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~ 275 (286)
T 3gpi_A 199 QQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAY-PAGATP--PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLA 275 (286)
T ss_dssp HHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCC-CCSCCC--CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHH
T ss_pred hhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCC-CCCCCc--ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHH
Confidence 87 4556679986 678999999999999997532 211111 33456789999999999999 7 79999999999
Q ss_pred HHHHc
Q 020608 315 SLKAK 319 (323)
Q Consensus 315 ~~~~~ 319 (323)
|+..+
T Consensus 276 ~~~~~ 280 (286)
T 3gpi_A 276 AMREG 280 (286)
T ss_dssp HHTC-
T ss_pred HHhcc
Confidence 98754
No 34
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=100.00 E-value=2.2e-44 Score=315.30 Aligned_cols=286 Identities=15% Similarity=0.106 Sum_probs=220.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 81 (323)
++|+|||||||||||++|+++|+++|++|+++.|+. .+|++|.+++.++++ ++|+|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~v 59 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQV 59 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEE
Confidence 568999999999999999999999999999887642 389999999999998 99999
Q ss_pred EEcccCCcc-CCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCC----CChhhhc
Q 020608 82 FHLASPCIV-DKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCW----TDEEYCR 156 (323)
Q Consensus 82 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~----~~~~~~~ 156 (323)
||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.+++. ... ..+++|+++ ..|.
T Consensus 60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg-~~~---~~~~~E~~~~~~~~~p~--- 132 (321)
T 1e6u_A 60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP-KLA---KQPMAESELLQGTLEPT--- 132 (321)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSC-TTC---CSSBCGGGTTSSCCCGG---
T ss_pred EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcC-CCC---CCCcCccccccCCCCCC---
Confidence 999987531 1123456778999999999999999999999999999995544 332 457788763 2221
Q ss_pred cCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC---CchhHHHHHHHHc----C-CCCC---ccCcCCC
Q 020608 157 QNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT---LNASMLMLLRLLQ----G-CTDT---YENFFMG 225 (323)
Q Consensus 157 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~---~~~~~~~~~~~~~----g-~~~~---~~~~~~~ 225 (323)
.+.|+.+|..+|.+++.++++++++++++||+.+|||+.... ......++..+.. | .+.. .++..++
T Consensus 133 --~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 210 (321)
T 1e6u_A 133 --NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMRE 210 (321)
T ss_dssp --GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEEC
T ss_pred --CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEE
Confidence 146999999999999999888899999999999999986532 1223344444433 3 3332 2445678
Q ss_pred cccHHHHHHHHHHhhcCCCC---------CccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH
Q 020608 226 SVHFKDVALAHILVYENPSA---------CGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL 295 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~~---------~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (323)
|+|++|+|++++.+++++.. ++.||++ ++.+|+.|+++.+.+.+|........+..........+|++|+
T Consensus 211 ~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~ 290 (321)
T 1e6u_A 211 FLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRL 290 (321)
T ss_dssp EEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHH
T ss_pred eEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHH
Confidence 99999999999999987654 3679985 6789999999999999874311111111122334578999999
Q ss_pred hhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 296 MDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 296 ~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
++|||+| ++++++|+++++|++++.
T Consensus 291 ~~lG~~p~~~~~~~l~~~~~~~~~~~ 316 (321)
T 1e6u_A 291 HQLGWYHEISLEAGLASTYQWFLENQ 316 (321)
T ss_dssp HHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HhcCCccCCcHHHHHHHHHHHHHHHH
Confidence 3399999 899999999999998764
No 35
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=100.00 E-value=2.4e-44 Score=320.07 Aligned_cols=305 Identities=21% Similarity=0.182 Sum_probs=228.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVF 82 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 82 (323)
|+|||||||||||++|+++|++. |++|++++|+..... .+.+..+.. ..+++++.+|++|.+++.++++ ++|+||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc-hhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 47999999999999999999998 799999998652111 111122211 3478999999999999999998 899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC--CcC-------EEEEecccccccCCCCC------CCCccccCC
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL--GVK-------RVVVTSSISSITPSPKW------PADKVKDED 147 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-------~~v~~SS~~~~~~~~~~------~~~~~~~e~ 147 (323)
|+|+......+..++...+++|+.++.+++++|.+. +++ +|||+||.+++...... ....+++|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~ 158 (361)
T 1kew_A 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence 999975432233456789999999999999999887 776 99999998554322100 000167887
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-cc--CcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YE--NFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~ 224 (323)
++..+. +.|+.+|.++|.+++.++.+++++++++||+.+|||..... .....++..+..+.+.. ++ ...+
T Consensus 159 ~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (361)
T 1kew_A 159 TAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR 231 (361)
T ss_dssp SCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred CCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeE
Confidence 765443 77999999999999999888899999999999999986432 22334556666776543 23 3456
Q ss_pred CcccHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC-C--C-----CCCCCCCCCCccccccchhH
Q 020608 225 GSVHFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD-I--P-----RLPKDTQPGLLRTKDGAKKL 295 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-~--~-----~~~~~~~~~~~~~~~~~~~~ 295 (323)
+|+|++|+|++++.+++....++.||++ ++.+|+.|+++.+.+.++... . | .+..........+.+|++|+
T Consensus 232 ~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~ 311 (361)
T 1kew_A 232 DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI 311 (361)
T ss_dssp EEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHH
T ss_pred eeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHH
Confidence 7999999999999999866555579986 567999999999998875311 0 0 00111111223567899999
Q ss_pred -hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 296 -MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 296 -~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
+.|||+| ++++++|+++++|++++
T Consensus 312 ~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 312 SRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp HHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred HHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 7799999 89999999999999875
No 36
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=3.1e-43 Score=314.20 Aligned_cols=303 Identities=17% Similarity=0.130 Sum_probs=228.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC----CCCCeEEEEccCCCHhHHHHHhcC--C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG----ADTRLRLFQIDLLDYDAIAAAVTG--C 78 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~ 78 (323)
||+|||||||||||++++++|+++|++|++++|+.+... ...+..+.. ...+++++.+|++|.+++.+++++ +
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN-TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc-hHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 589999999999999999999999999999999754311 111111111 124788999999999999998885 7
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCc---CEEEEecccccccCCCCCCCCccccCCCCCChhhh
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGV---KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC 155 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 155 (323)
|+|||+|+........+++...+++|+.++.++++++++.++ ++||++||.+++ +... ..+++|+++..|.
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~-g~~~---~~~~~E~~~~~~~-- 153 (372)
T 1db3_A 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY-GLVQ---EIPQKETTPFYPR-- 153 (372)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG-TTCC---SSSBCTTSCCCCC--
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhh-CCCC---CCCCCccCCCCCC--
Confidence 999999998655455667788999999999999999999887 799999998554 4332 4578888776554
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCc--hhHHHHHHHHcCCCC--Cc--cCcCCCcccH
Q 020608 156 RQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLN--ASMLMLLRLLQGCTD--TY--ENFFMGSVHF 229 (323)
Q Consensus 156 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~--~~--~~~~~~~i~v 229 (323)
+.|+.+|.++|.+++.++.+++++++++|++.+|||+...... ....++..+..|... .. +++.++|+|+
T Consensus 154 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v 229 (372)
T 1db3_A 154 ----SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA 229 (372)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH
T ss_pred ----ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEH
Confidence 7799999999999999998889999999999999997643321 122344555666532 23 3456779999
Q ss_pred HHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC------CCCC-----------------------CC
Q 020608 230 KDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD------IPRL-----------------------PK 279 (323)
Q Consensus 230 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~------~~~~-----------------------~~ 279 (323)
+|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|... +|.+ .+
T Consensus 230 ~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1db3_A 230 KDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDP 308 (372)
T ss_dssp HHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECG
T ss_pred HHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccc
Confidence 999999999998764 4679975 678999999999999986421 1110 00
Q ss_pred --CCCCCCccccccchhH-hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 280 --DTQPGLLRTKDGAKKL-MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 280 --~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
..........+|++|+ ++|||+| ++++++|+++++|++++
T Consensus 309 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 309 RYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp GGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 0111223467899999 7799999 99999999999999765
No 37
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=100.00 E-value=2.1e-43 Score=311.95 Aligned_cols=302 Identities=19% Similarity=0.258 Sum_probs=225.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++|+|||||||||||++|+++|+++|++|++++|+...... ....+. ...+++++.+|+.+.. +.++|+||
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vi 96 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR--NVEHWI-GHENFELINHDVVEPL-----YIEVDQIY 96 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GTGGGT-TCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh--hhhhhc-cCCceEEEeCccCChh-----hcCCCEEE
Confidence 467899999999999999999999999999999997543211 111111 1246899999998753 56899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+.........++...+++|+.++.+++++|++.++ +|||+||.+++ +... ..+++|+.+.... +..+.+.|
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~-g~~~---~~~~~E~~~~~~~-~~~~~~~Y 170 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVY-GDPE---VHPQSEDYWGHVN-PIGPRACY 170 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGG-BSCS---SSSBCTTCCCBCC-SSSTTHHH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHh-CCCC---CCCCcccccccCC-CCCCCCch
Confidence 99997543323456678899999999999999998886 99999998554 4332 4567777532211 11223679
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC-CchhHHHHHHHHcCCCCC-cc--CcCCCcccHHHHHHHHHH
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT-LNASMLMLLRLLQGCTDT-YE--NFFMGSVHFKDVALAHIL 238 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~-~~--~~~~~~i~v~D~a~~~~~ 238 (323)
+.+|.++|.+++.++++++++++++||+.+|||+.... ......++..+..+.+.. .+ ...++|+|++|+|++++.
T Consensus 171 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 250 (343)
T 2b69_A 171 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA 250 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence 99999999999999888899999999999999976432 223345566667777653 33 345679999999999999
Q ss_pred hhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-hhhCCcc-cCHHHHHHHHHHH
Q 020608 239 VYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-MDLGLQF-IPMDQIIKDSVES 315 (323)
Q Consensus 239 ~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~~~-~~~~~~l~~~~~~ 315 (323)
+++.+ .++.||++ ++.+|+.|+++.+.+.+|........+..........+|++|+ +.|||+| ++++++|+++++|
T Consensus 251 ~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~ 329 (343)
T 2b69_A 251 LMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 329 (343)
T ss_dssp HHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred HHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 99865 35679985 6789999999999999875321111111112234567899999 7899999 8999999999999
Q ss_pred HHHc
Q 020608 316 LKAK 319 (323)
Q Consensus 316 ~~~~ 319 (323)
++++
T Consensus 330 ~~~~ 333 (343)
T 2b69_A 330 FRKE 333 (343)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 38
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=100.00 E-value=2e-43 Score=310.31 Aligned_cols=291 Identities=18% Similarity=0.154 Sum_probs=223.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 80 (323)
+++|+|||||||||||++|+++|+++|++|++++|+...... ....+ .+++++.+|++|.+++.++++ ++|+
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKRE--VLPPV----AGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGG--GSCSC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchh--hhhcc----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 567899999999999999999999999999999996543211 01111 478899999999999999999 9999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+|+..... +..++. +++|+.++.+++++|.+.++++||++||.+++ +..... ..+++|++ .+ .+
T Consensus 92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~-~~~~~~-~~~~~E~~--~~------~~ 158 (330)
T 2pzm_A 92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCY-GRPATV-PIPIDSPT--AP------FT 158 (330)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGG-CSCSSS-SBCTTCCC--CC------CS
T ss_pred EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHh-CCCccC-CCCcCCCC--CC------CC
Confidence 99999976442 233343 89999999999999998888999999999554 332100 11677776 22 26
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc-CCCcccHHHHHH-HHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF-FMGSVHFKDVAL-AHIL 238 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~i~v~D~a~-~~~~ 238 (323)
.|+.+|.++|.+++.+ +++++++||+++|||+.. ......++..+..+. ..++++ ..+++|++|+|+ +++.
T Consensus 159 ~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~ 231 (330)
T 2pzm_A 159 SYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLS 231 (330)
T ss_dssp HHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHH
Confidence 6999999999998654 799999999999999852 223334455555665 333333 567999999999 9999
Q ss_pred hhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-----hhhCCcc-cCHHHHHHH
Q 020608 239 VYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-----MDLGLQF-IPMDQIIKD 311 (323)
Q Consensus 239 ~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~lG~~~-~~~~~~l~~ 311 (323)
+++++. ++.||++ ++.+++.|+++.+.+.+|...+. ..+.. .......+|++|+ ++|||+| ++++++|++
T Consensus 232 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~-~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~ 308 (330)
T 2pzm_A 232 LQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAE-PVPVV-APGADDVPSVVLDPSKTETEFGWKAKVDFKDTITG 308 (330)
T ss_dssp TSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSS-CCCEE-CCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred HhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCce-eCCCC-cchhhccCCHHHHhhchHHHcCCcccCCHHHHHHH
Confidence 998765 6679985 57899999999999998754211 11111 1334567788888 7899999 999999999
Q ss_pred HHHHHHHcCCC
Q 020608 312 SVESLKAKGFI 322 (323)
Q Consensus 312 ~~~~~~~~~~~ 322 (323)
+++|+++++++
T Consensus 309 ~~~~~~~~~~~ 319 (330)
T 2pzm_A 309 QLAWYDKYGVT 319 (330)
T ss_dssp HHHHHHHHCSC
T ss_pred HHHHHHhhCcc
Confidence 99999999876
No 39
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=100.00 E-value=3e-43 Score=314.64 Aligned_cols=304 Identities=17% Similarity=0.121 Sum_probs=230.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-----CCCCeEEEEccCCCHhHHHHHhcC--
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-----ADTRLRLFQIDLLDYDAIAAAVTG-- 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~-- 77 (323)
||+|||||||||||++|+++|+++|++|++++|+++.... ..+..+.. ...+++++.+|++|.+++.+++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 102 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT-GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK 102 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-TTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccch-hhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence 3789999999999999999999999999999997643100 01111110 124688999999999999998885
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCc---CEEEEecccccccCCCCCCCCccccCCCCCChhh
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGV---KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEY 154 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~ 154 (323)
+|+|||+|+......+..++...+++|+.++.++++++++.++ ++||++||.+++.... ..+++|+++..|.
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~----~~~~~E~~~~~~~- 177 (375)
T 1t2a_A 103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ----EIPQKETTPFYPR- 177 (375)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS----SSSBCTTSCCCCC-
T ss_pred CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC----CCCCCccCCCCCC-
Confidence 6999999997543222345677899999999999999999887 7999999995554332 4578888776553
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCc--hhHHHHHHHHcCCCC--Cc--cCcCCCccc
Q 020608 155 CRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLN--ASMLMLLRLLQGCTD--TY--ENFFMGSVH 228 (323)
Q Consensus 155 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~--~~--~~~~~~~i~ 228 (323)
+.|+.+|.++|.+++.++.+++++++++||+.+|||+...... ....++.++..|... .. ++..++|+|
T Consensus 178 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 252 (375)
T 1t2a_A 178 -----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 252 (375)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred -----ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence 6799999999999999988889999999999999997543321 122344555566533 23 345677999
Q ss_pred HHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC------CCCC-------------CC--CCCCCCc
Q 020608 229 FKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD------IPRL-------------PK--DTQPGLL 286 (323)
Q Consensus 229 v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~------~~~~-------------~~--~~~~~~~ 286 (323)
++|+|++++.+++++. .+.||++ ++.+|+.|+++.+.+.+|... +|.+ .. .......
T Consensus 253 v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (375)
T 1t2a_A 253 AKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVD 331 (375)
T ss_dssp HHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCC
T ss_pred HHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccch
Confidence 9999999999998765 4679975 678999999999999997531 1111 00 0112223
Q ss_pred cccccchhH-hhhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 287 RTKDGAKKL-MDLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 287 ~~~~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
...+|++|+ ++|||+| ++++++|+++++|++++.
T Consensus 332 ~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 332 FLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp BCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 467899999 7899999 899999999999998753
No 40
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=100.00 E-value=4.2e-43 Score=310.03 Aligned_cols=304 Identities=16% Similarity=0.134 Sum_probs=231.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~ 80 (323)
|++|+|||||||||||++|+++|+++|++|++++|+.+.... ..+..+.. ..+++++.+|++|.+++.+++++ +|+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-WRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-HHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-ccHhhccc-cCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 357899999999999999999999999999999998754221 22222211 24688999999999999998885 699
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCc-CEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGV-KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
|||+|+......+.+++...+++|+.++.+++++|++.++ ++||++||.++| +... ..+++|+.+..+.
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy-g~~~---~~~~~e~~~~~~~------ 148 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMF-GKVQ---EIPQTEKTPFYPR------ 148 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGG-CSCS---SSSBCTTSCCCCC------
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhc-CCCC---CCCCCccCCCCCC------
Confidence 9999997644334567788999999999999999988876 899999999554 4332 4567888766553
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCch--hHHHHHHHHcCCCCC--cc--CcCCCcccHHHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNA--SMLMLLRLLQGCTDT--YE--NFFMGSVHFKDVA 233 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~--~~~~~~~~~~g~~~~--~~--~~~~~~i~v~D~a 233 (323)
+.|+.+|.++|.+++.++.+++++++++|++++|||+....... ....+.++..|.... .+ ...++|+|++|+|
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva 228 (345)
T 2z1m_A 149 SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV 228 (345)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence 67999999999999999888899999999999999986432211 122344445564322 33 3456799999999
Q ss_pred HHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC------CCCC-------------CC--CCCCCCcccccc
Q 020608 234 LAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD------IPRL-------------PK--DTQPGLLRTKDG 291 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~------~~~~-------------~~--~~~~~~~~~~~~ 291 (323)
++++.+++++. .+.||++ ++.+++.|+++.+.+.+|... +|.+ .. ..........+|
T Consensus 229 ~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (345)
T 2z1m_A 229 EAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGN 307 (345)
T ss_dssp HHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred HHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecC
Confidence 99999998765 4679975 678999999999999997531 1110 00 011122345779
Q ss_pred chhH-hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 292 AKKL-MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 292 ~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
++|+ ++|||+| ++++++|+++++|++++
T Consensus 308 ~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 308 PEKAMKKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp CHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 9999 7899999 99999999999999875
No 41
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=100.00 E-value=3.5e-43 Score=309.89 Aligned_cols=303 Identities=17% Similarity=0.128 Sum_probs=222.2
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc-HHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD-ERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVF 82 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 82 (323)
|+|||||||||||++++++|+++|++|+++.|.... ......+.... +.+++++.+|++|.+++.++++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 489999999999999999999999999999875322 12222222211 2367889999999999998887 599999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+||.........++...+++|+.++.++++++++.++++||++||.++ |+... ..+++|+.+..+ +.+.|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~-~g~~~---~~~~~e~~~~~~-----~~~~Y 149 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATV-YGDNP---KIPYVESFPTGT-----PQSPY 149 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGG-GCSCC---SSSBCTTSCCCC-----CSSHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHH-hCCCC---CCCcCcccCCCC-----CCChH
Confidence 9999753322233456789999999999999998888899999999855 44332 457788776533 12679
Q ss_pred HHHHHHHHHHHHHHHHhC-CccEEEEcCCCccCCCCC------CC--CchhHHHHHHHHcC--CCCC---------ccCc
Q 020608 163 PLSKTLAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIP------PT--LNASMLMLLRLLQG--CTDT---------YENF 222 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~------~~--~~~~~~~~~~~~~g--~~~~---------~~~~ 222 (323)
+.+|.++|.+++.++.++ +++++++||+++|||... .. .......+.....+ .+.. .+.+
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 229 (338)
T 1udb_A 150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG 229 (338)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCce
Confidence 999999999999998776 899999999999998421 11 11122233333332 2211 1334
Q ss_pred CCCcccHHHHHHHHHHhhcCC--CCC-ccEEEE-cCccCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCccccccchhH-h
Q 020608 223 FMGSVHFKDVALAHILVYENP--SAC-GRHLCV-EAISHYGDFVAKVAELYPEYDIPRL-PKDTQPGLLRTKDGAKKL-M 296 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 296 (323)
.++|||++|+|++++.++++. ..+ +.||++ ++++|+.|+++.+.+.++.. ++.. .+..........+|++|+ +
T Consensus 230 ~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~ 308 (338)
T 1udb_A 230 VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKADR 308 (338)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCHHHHH
T ss_pred eeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC-CcceeCCCCCCchhhhhcCHHHHHH
Confidence 567999999999999988753 232 469985 67899999999999988642 2211 111122334567899999 7
Q ss_pred hhCCcc-cCHHHHHHHHHHHHHHcC
Q 020608 297 DLGLQF-IPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 297 ~lG~~~-~~~~~~l~~~~~~~~~~~ 320 (323)
+|||+| ++++++|+++++|++++.
T Consensus 309 ~lG~~p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 309 ELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp HHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred HcCCCcCCCHHHHHHHHHHHHHhcc
Confidence 899999 899999999999998864
No 42
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=100.00 E-value=4.3e-44 Score=308.61 Aligned_cols=272 Identities=15% Similarity=0.066 Sum_probs=219.9
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 83 (323)
|+|||||||||||++++++|+++|++|++++|. .+|++|.+.+.++++ ++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 399999999999999999999999999999882 389999999999998 6999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+.........++...+++|+.++.+++++|++.++ +|||+||.+++.+.. ..+++|+++..|. +.|+
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~----~~~~~E~~~~~p~------~~Y~ 131 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDR----PEGYDEFHNPAPI------NIYG 131 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCC----SSCBCTTSCCCCC------SHHH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCC----CCCCCCCCCCCCC------CHHH
Confidence 9998755445567888999999999999999999887 799999995544332 5688999877664 7899
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcCCCcccHHHHHHHHHHhhcC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+|..+|.+++.++ .+++++||+.+|||+.. .....++..+..+.+.. .+++.++|+|++|+|++++.++++
T Consensus 132 ~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 204 (287)
T 3sc6_A 132 ASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT 204 (287)
T ss_dssp HHHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence 99999999997664 47899999999999753 23334555555566554 566777899999999999999998
Q ss_pred CCCCccEEEE-cCccCHHHHHHHHHHHCCCCC----CCCCC-CCCCCCCccccccchhHhhhCCcc-cCHHHHHHHHHHH
Q 020608 243 PSACGRHLCV-EAISHYGDFVAKVAELYPEYD----IPRLP-KDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVES 315 (323)
Q Consensus 243 ~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~~ 315 (323)
+. ++.||++ ++.+|+.|+++.+.+.+|... ++... ...........+|++|+++|||.| ++++++|+++++|
T Consensus 205 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~ 283 (287)
T 3sc6_A 205 SL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 283 (287)
T ss_dssp CC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHH
T ss_pred CC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHH
Confidence 76 7789975 678999999999999997521 11000 112233345788999999999999 9999999999999
Q ss_pred HHHc
Q 020608 316 LKAK 319 (323)
Q Consensus 316 ~~~~ 319 (323)
++++
T Consensus 284 ~~~~ 287 (287)
T 3sc6_A 284 TKSH 287 (287)
T ss_dssp TC--
T ss_pred HhcC
Confidence 8653
No 43
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=100.00 E-value=7.7e-43 Score=307.99 Aligned_cols=308 Identities=27% Similarity=0.308 Sum_probs=228.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-CCCCeEEE-EccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-ADTRLRLF-QIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~-~~Dl~~~~~~~~~~~~~d~ 80 (323)
+++|+|||||||||||++|+++|+++|++|++++|+.+...... ..+.. ...+++++ .+|++|.+.+.++++++|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ--KRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH--HHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 46789999999999999999999999999999999653222111 11110 12468888 8999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhh-CCcCEEEEecccccccCCCCCCCCccccCCCCCChhh-----
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKA-LGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEY----- 154 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~----- 154 (323)
|||+|+.... ..++...+++|+.++.+++++|++ .++++|||+||.++++.......+.+++|+++.....
T Consensus 87 vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 163 (342)
T 1y1p_A 87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred EEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence 9999997543 246778999999999999999984 5689999999996664332111125788887522100
Q ss_pred -----hccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCC--chhHHHHHHHHcCCCCC-ccC-cC
Q 020608 155 -----CRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTL--NASMLMLLRLLQGCTDT-YEN-FF 223 (323)
Q Consensus 155 -----~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~--~~~~~~~~~~~~g~~~~-~~~-~~ 223 (323)
+..+.+.|+.+|.++|.+++.+++++ +++++++||+++|||...... .....++..+..|.+.. .++ +.
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1y1p_A 164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP 243 (342)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCc
Confidence 01122679999999999999998765 789999999999999765432 13445666777777654 333 45
Q ss_pred CCcccHHHHHHHHHHhhcCCCCCcc-EEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhH-hhhCC-
Q 020608 224 MGSVHFKDVALAHILVYENPSACGR-HLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKL-MDLGL- 300 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lG~- 300 (323)
++|+|++|+|++++.+++++...|. +.++++.+|+.|+++.+.+.+|...++..... .......+|++|+ +.|||
T Consensus 244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lg~~ 321 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--QGQDLSKFDTAPSLEILKSL 321 (342)
T ss_dssp EEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--CCCCCCEECCHHHHHHHHHT
T ss_pred CCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCc--cccccccCChHHHHHHHhhc
Confidence 6699999999999999987655454 55567789999999999999976433322111 1122467899999 77887
Q ss_pred --cc-cCHHHHHHHHHHHHH
Q 020608 301 --QF-IPMDQIIKDSVESLK 317 (323)
Q Consensus 301 --~~-~~~~~~l~~~~~~~~ 317 (323)
.+ ++++++|+++++|++
T Consensus 322 ~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 322 GRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp TCCSCCCHHHHHHHHHCCSC
T ss_pred ccCCcCCHHHHHHHHHHHhh
Confidence 56 899999999999874
No 44
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=100.00 E-value=3.1e-43 Score=312.50 Aligned_cols=293 Identities=15% Similarity=0.116 Sum_probs=224.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----C
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-----G 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~ 77 (323)
++|+|||||||||||++|+++|+++| ++|+++.|+..... ...+. ++. +.+|++|.+.++++++ +
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----~~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK----FVNLV----DLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG----GGGTT----TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch----hhccc----Cce-EeeecCcHHHHHHHHhhcccCC
Confidence 45899999999999999999999999 99999998764321 11111 222 6799999999999887 5
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhcc
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQ 157 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 157 (323)
+|+|||+|+.... ...++...+++|+.++.+++++|++.++ +||++||.+++ +... ..+++|+++..|.
T Consensus 116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~-g~~~---~~~~~E~~~~~p~---- 184 (357)
T 2x6t_A 116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATY-GGRT---SDFIESREYEKPL---- 184 (357)
T ss_dssp CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGG-CSCS---SCCCSSGGGCCCS----
T ss_pred CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHh-CCCC---CCCcCCcCCCCCC----
Confidence 9999999997543 4556788999999999999999998888 99999999554 4332 4467887765543
Q ss_pred CCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC---CchhHHHHHHHHcCCCCC-ccC--c-CCCcccHH
Q 020608 158 NEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT---LNASMLMLLRLLQGCTDT-YEN--F-FMGSVHFK 230 (323)
Q Consensus 158 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~-~~~--~-~~~~i~v~ 230 (323)
+.|+.+|.++|.+++.++.+++++++++||+.+|||+.... ......++..+..+.+.. .++ . .++|+|++
T Consensus 185 --~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 262 (357)
T 2x6t_A 185 --NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 262 (357)
T ss_dssp --SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred --ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence 77999999999999999888899999999999999976432 123344556666776553 333 4 56799999
Q ss_pred HHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCC---CCCCccccccchhHhhhCC-cc-cC
Q 020608 231 DVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDT---QPGLLRTKDGAKKLMDLGL-QF-IP 304 (323)
Q Consensus 231 D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lG~-~~-~~ 304 (323)
|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...+....... ........+|++|+++||| .| ++
T Consensus 263 Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~ 341 (357)
T 2x6t_A 263 DVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKT 341 (357)
T ss_dssp HHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCC
Confidence 99999999998766 6679985 67899999999999998753111111111 0112346789999977999 67 99
Q ss_pred HHHHHHHHHHHHHHc
Q 020608 305 MDQIIKDSVESLKAK 319 (323)
Q Consensus 305 ~~~~l~~~~~~~~~~ 319 (323)
++++|+++++|++++
T Consensus 342 l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 342 VAEGVTEYMAWLNRD 356 (357)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999763
No 45
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=100.00 E-value=2.7e-42 Score=303.53 Aligned_cols=294 Identities=20% Similarity=0.165 Sum_probs=219.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~ 80 (323)
++||+|||||||||||++|+++|+++|++|++++|+..... +.+.. ..+++++.+|++|.+++.+++++ +|+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR-----EHLKD-HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-----GGSCC-CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch-----hhHhh-cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 46899999999999999999999999999999999754321 11111 14788999999999999999987 999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC-
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE- 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~- 159 (323)
|||+|+..... ...++. +++|+.++.+++++|++.++++||++||.+++....... ..+++|++ . +.
T Consensus 93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~-~~~~~E~~--~------p~~ 160 (333)
T 2q1w_A 93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQ-PVRLDHPR--N------PAN 160 (333)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSS-SBCTTSCC--C------CTT
T ss_pred EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccC-CCCcCCCC--C------CCC
Confidence 99999975442 223333 899999999999999998889999999985543111000 22677775 1 22
Q ss_pred CchHHHHHHHHHHHHH-HHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc-cCcCCCcccHHHHHHHHH
Q 020608 160 IWYPLSKTLAEKAAWE-FAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY-ENFFMGSVHFKDVALAHI 237 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~-~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~i~v~D~a~~~~ 237 (323)
+.|+.+|.++|.+++. ++ +++++||+++|||+.. ......++..+..+. ... +....+++|++|+|++++
T Consensus 161 ~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~ 232 (333)
T 2q1w_A 161 SSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATV 232 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHH
Confidence 5699999999999876 43 8999999999999832 223334555556665 333 345567999999999999
Q ss_pred HhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCC---CCCCccccccchhHhhhCCcc-cCHHHHHHHH
Q 020608 238 LVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDT---QPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDS 312 (323)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~ 312 (323)
.+++++. ++.||++ ++.+++.|+++.+.+.+|...+....... ........+|++|++.+||+| ++++++|+++
T Consensus 233 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~ 311 (333)
T 2q1w_A 233 RAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAA 311 (333)
T ss_dssp HHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred HHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHH
Confidence 9998776 6679985 67899999999999999754111111000 011145788999994449999 9999999999
Q ss_pred HHHHHHcCCCC
Q 020608 313 VESLKAKGFIS 323 (323)
Q Consensus 313 ~~~~~~~~~~~ 323 (323)
++|+++++.++
T Consensus 312 ~~~~~~~~~~~ 322 (333)
T 2q1w_A 312 VAYFREYGVSG 322 (333)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHCCCC
Confidence 99999998764
No 46
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=4.1e-43 Score=305.66 Aligned_cols=290 Identities=16% Similarity=0.122 Sum_probs=212.5
Q ss_pred eEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC-----CCE
Q 020608 7 VVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG-----CTG 80 (323)
Q Consensus 7 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d~ 80 (323)
+|||||||||||++|+++|+++| ++|+++.|+..... ..... ++. +.+|++|.+.+++++++ +|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhcC-------cce-eccccccHHHHHHHHhccccCCCcE
Confidence 58999999999999999999999 99999998764321 11221 122 67999999999999875 999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+|+.... ...++...+++|+.++.+++++|++.++ +||++||.+++ +... ..+++|+++..|. +
T Consensus 72 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~-g~~~---~~~~~E~~~~~p~------~ 138 (310)
T 1eq2_A 72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATY-GGRT---SDFIESREYEKPL------N 138 (310)
T ss_dssp EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGG-TTCC---SCBCSSGGGCCCS------S
T ss_pred EEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHh-CCCC---CCCCCCCCCCCCC------C
Confidence 9999997543 4556788999999999999999999888 99999999554 4332 4477887765543 7
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC---CchhHHHHHHHHcCCCCC-cc--Cc-CCCcccHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT---LNASMLMLLRLLQGCTDT-YE--NF-FMGSVHFKDVA 233 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~-~~--~~-~~~~i~v~D~a 233 (323)
.|+.+|..+|.+++.++.++|++++++||+.+|||+.... ......++..+..+.+.. .+ .. .++|+|++|+|
T Consensus 139 ~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva 218 (310)
T 1eq2_A 139 VYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 218 (310)
T ss_dssp HHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHH
Confidence 7999999999999999888899999999999999976421 123334556666776543 33 34 66899999999
Q ss_pred HHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCC---CCCCccccccchhHhhhCC-cc-cCHHH
Q 020608 234 LAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDT---QPGLLRTKDGAKKLMDLGL-QF-IPMDQ 307 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lG~-~~-~~~~~ 307 (323)
++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...+.....+. ........+|++|+++||| .| +++++
T Consensus 219 ~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~ 297 (310)
T 1eq2_A 219 DVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAE 297 (310)
T ss_dssp HHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHH
T ss_pred HHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHH
Confidence 99999998766 6679985 67899999999999988753111111111 0112346789999977999 68 99999
Q ss_pred HHHHHHHHHHHc
Q 020608 308 IIKDSVESLKAK 319 (323)
Q Consensus 308 ~l~~~~~~~~~~ 319 (323)
+|+++++|++++
T Consensus 298 ~l~~~~~~~~~~ 309 (310)
T 1eq2_A 298 GVTEYMAWLNRD 309 (310)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 47
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=100.00 E-value=3.5e-43 Score=307.11 Aligned_cols=293 Identities=22% Similarity=0.243 Sum_probs=223.4
Q ss_pred eEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEE
Q 020608 7 VVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVF 82 (323)
Q Consensus 7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 82 (323)
+|||||||||||++|+++|+++ |++|++++|+..... +++++.+|++|.+++.++++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~~~d~vi 67 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKYSIDAIF 67 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence 5899999999999999999998 899999998754311 45678999999999999998 899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+.... ....++...+++|+.++.+++++|++.++++||++||.+++..... ..+.+|+.+..|. +.|
T Consensus 68 h~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~p~------~~Y 137 (317)
T 3ajr_A 68 HLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP---KNKVPSITITRPR------TMF 137 (317)
T ss_dssp ECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC---SSSBCSSSCCCCC------SHH
T ss_pred ECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC---CCCccccccCCCC------chH
Confidence 99987532 1224567789999999999999999999999999999965543321 3456777665543 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCC-C--ccCcCCCcccHHHHHHHH
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTD-T--YENFFMGSVHFKDVALAH 236 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~-~--~~~~~~~~i~v~D~a~~~ 236 (323)
+.+|.++|.+++.++++++++++++||+.+||+...+.. ......+.+...+... . .++..++|+|++|+|+++
T Consensus 138 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 217 (317)
T 3ajr_A 138 GVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKAL 217 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHH
Confidence 999999999999988888999999999999997643221 1122233343443332 2 244566799999999999
Q ss_pred HHhhcCCCC----CccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCC--CCCccccccchhH-hhhCCcc-cCHHHH
Q 020608 237 ILVYENPSA----CGRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQ--PGLLRTKDGAKKL-MDLGLQF-IPMDQI 308 (323)
Q Consensus 237 ~~~~~~~~~----~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~lG~~~-~~~~~~ 308 (323)
+.+++++.. ++.||++++.+|+.|+++.+.+.+|...++....... .......+|++|+ ++|||+| ++++++
T Consensus 218 ~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~ 297 (317)
T 3ajr_A 218 VDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRT 297 (317)
T ss_dssp HHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHH
T ss_pred HHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHH
Confidence 999986542 3569988778999999999999987433222111000 0111346799999 7899999 899999
Q ss_pred HHHHHHHHHHcCCC
Q 020608 309 IKDSVESLKAKGFI 322 (323)
Q Consensus 309 l~~~~~~~~~~~~~ 322 (323)
|+++++|++++...
T Consensus 298 l~~~~~~~~~~~~~ 311 (317)
T 3ajr_A 298 IDDMIDHISEKLGI 311 (317)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhhhcc
Confidence 99999999887543
No 48
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=100.00 E-value=1.8e-43 Score=306.38 Aligned_cols=279 Identities=16% Similarity=0.049 Sum_probs=220.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih 83 (323)
|+|||||||||||++|+++|+ +|++|++++|+.. ++.+|++|.+++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999 8999999998641 247999999999999986 999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+.........++...+++|+.++.+++++|++.++ +|||+||.+++.... ..+++|+++..|. +.|+
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~----~~~~~E~~~~~p~------~~Y~ 129 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTG----DIPWQETDATSPL------NVYG 129 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCT----TCCBCTTSCCCCS------SHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCC----CCCCCCCCCCCCc------cHHH
Confidence 9997544334567788999999999999999999887 899999995544332 4578888876654 7799
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcCCCcccHHHHHHHHHHhhcC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+|.++|.+++.++ .+++++||+.+|||+.. .....++..+..+.+.. .+++.++|+|++|+|++++.++++
T Consensus 130 ~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 202 (299)
T 1n2s_A 130 KTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV 202 (299)
T ss_dssp HHHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence 99999999997664 38999999999999754 23334555666676543 566677899999999999999986
Q ss_pred C--C--CCccEEEE-cCccCHHHHHHHHHHHCCCCC----------CCCCC-CCCCCCCccccccchhH-hhhCCcccCH
Q 020608 243 P--S--ACGRHLCV-EAISHYGDFVAKVAELYPEYD----------IPRLP-KDTQPGLLRTKDGAKKL-MDLGLQFIPM 305 (323)
Q Consensus 243 ~--~--~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~-~~lG~~~~~~ 305 (323)
+ . .++.||++ ++.+|+.|+++.+.+.+|... ++... ...........+|++|+ +.|||+|.++
T Consensus 203 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 282 (299)
T 1n2s_A 203 ALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQW 282 (299)
T ss_dssp HHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBH
T ss_pred hccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCH
Confidence 5 2 35679975 678999999999998875321 11100 01112234578999999 7799999889
Q ss_pred HHHHHHHHHHHHHcCCC
Q 020608 306 DQIIKDSVESLKAKGFI 322 (323)
Q Consensus 306 ~~~l~~~~~~~~~~~~~ 322 (323)
+++|+++++|++++..|
T Consensus 283 ~~~l~~~~~~~~~~~~i 299 (299)
T 1n2s_A 283 ELGVKRMLTEMFTTTTI 299 (299)
T ss_dssp HHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999987654
No 49
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=100.00 E-value=1.2e-42 Score=311.26 Aligned_cols=301 Identities=16% Similarity=0.098 Sum_probs=227.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC----CCC-CeEEEEccCCCHhHHHHHhcC--C
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG----ADT-RLRLFQIDLLDYDAIAAAVTG--C 78 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~-~~~~~~~Dl~~~~~~~~~~~~--~ 78 (323)
|+|||||||||||++|+++|+++|++|++++|+.+.... ..+..+.. ... +++++.+|++|.+++.+++++ +
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNT-QRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-TTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccc-hhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 799999999999999999999999999999997643110 00111100 012 688999999999999998885 6
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-----EEEEecccccccCCCCCCCCccccCCCCCChh
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-----RVVVTSSISSITPSPKWPADKVKDEDCWTDEE 153 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~ 153 (323)
|+|||+|+......+..++...+++|+.++.+++++|++.+++ +|||+||.+++ +... . +++|+++..+.
T Consensus 108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vy-g~~~---~-~~~E~~~~~~~ 182 (381)
T 1n7h_A 108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMF-GSTP---P-PQSETTPFHPR 182 (381)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGG-TTSC---S-SBCTTSCCCCC
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHh-CCCC---C-CCCCCCCCCCC
Confidence 9999999975432223456788999999999999999887665 99999998554 4332 3 78888776554
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCc--hhHHHHHHHHcCCCCC--cc--CcCCCcc
Q 020608 154 YCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLN--ASMLMLLRLLQGCTDT--YE--NFFMGSV 227 (323)
Q Consensus 154 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~--~~--~~~~~~i 227 (323)
+.|+.+|.++|.+++.++.+++++++++|++++|||+...... ....++..+..|.... .+ +..++|+
T Consensus 183 ------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v 256 (381)
T 1n7h_A 183 ------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG 256 (381)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred ------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence 7799999999999999988889999999999999998643321 1123344555665332 33 4456799
Q ss_pred cHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC--CCCCCC--CCCCCCccccccchhH-hhhCCc
Q 020608 228 HFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYD--IPRLPK--DTQPGLLRTKDGAKKL-MDLGLQ 301 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~-~~lG~~ 301 (323)
|++|+|++++.+++++. .+.||++ ++.+|+.|+++.+.+.+|... ...+.. ..........+|++|+ +.|||+
T Consensus 257 ~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 335 (381)
T 1n7h_A 257 FAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWK 335 (381)
T ss_dssp EHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCC
T ss_pred EHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCc
Confidence 99999999999998765 4679985 678999999999999997521 000111 0112233467899999 779999
Q ss_pred c-cCHHHHHHHHHHHHHHc
Q 020608 302 F-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 302 ~-~~~~~~l~~~~~~~~~~ 319 (323)
| ++++++|+++++|+.++
T Consensus 336 p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 336 PQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhh
Confidence 9 99999999999998765
No 50
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=100.00 E-value=7.8e-43 Score=304.68 Aligned_cols=283 Identities=19% Similarity=0.137 Sum_probs=192.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 82 (323)
+|+|||||||||||++|+++|+++|++|++++|++.. .+ ++.+|++|.+++.+++++ +|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 5899999999999999999999999999999986432 02 578999999999888874 89999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+......+..++...+++|+.++.++++++++.++ +|||+||.+++.+ . ..+++|+++..|. +.|
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~----~~~~~E~~~~~~~------~~Y 133 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-T----NPPYREEDIPAPL------NLY 133 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-S----SCSBCTTSCCCCC------SHH
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-C----CCCCCCCCCCCCc------CHH
Confidence 99997654444567788999999999999999998876 9999999966544 2 5678888876554 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHH-cCCCCC-ccCcCCCcccHHHHHHHHHHhh
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL-QGCTDT-YENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~i~v~D~a~~~~~~~ 240 (323)
+.+|..+|.+++.+ +++++++||+.+|||...........++..+. .+.+.. .++...+++|++|+|++++.++
T Consensus 134 ~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 209 (315)
T 2ydy_A 134 GKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLA 209 (315)
T ss_dssp HHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHH
Confidence 99999999999765 56789999999999976521111122344444 555443 4556678999999999999998
Q ss_pred cCC----CCCccEEEE-cCccCHHHHHHHHHHHCCCCC-----CCCCCCCCCCCCccccccchhHhhhCCcc-cCHHHHH
Q 020608 241 ENP----SACGRHLCV-EAISHYGDFVAKVAELYPEYD-----IPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQII 309 (323)
Q Consensus 241 ~~~----~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l 309 (323)
++. ..++.||++ ++.+|+.|+++.+.+.+|... ++..............+|++|++.+||+| ++++++|
T Consensus 210 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l 289 (315)
T 2ydy_A 210 EKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGI 289 (315)
T ss_dssp HHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHH
T ss_pred HhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHH
Confidence 753 456679975 678999999999999997532 11101101122345788999994459999 9999999
Q ss_pred HHHHHHHHHc
Q 020608 310 KDSVESLKAK 319 (323)
Q Consensus 310 ~~~~~~~~~~ 319 (323)
+++++|++++
T Consensus 290 ~~~~~~~~~~ 299 (315)
T 2ydy_A 290 KESLWPFLID 299 (315)
T ss_dssp HHHHGGGCC-
T ss_pred HHHHHHHccc
Confidence 9999998765
No 51
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.7e-42 Score=305.98 Aligned_cols=301 Identities=16% Similarity=0.087 Sum_probs=227.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC-------CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR-------YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (323)
+++|+|||||||||||++|+++|+++| ++|++++|+.+.... ....+++++.+|++|.+.+.+++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence 578899999999999999999999999 899999997643211 11346889999999999999988
Q ss_pred c-CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-----cCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 76 T-GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-----VKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 76 ~-~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
+ ++|+|||+|+.... ....++...+++|+.++.+++++|++.+ +++||++||.++ |+... ..+++|+++
T Consensus 84 ~~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~~---~~~~~E~~~ 158 (342)
T 2hrz_A 84 EARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV-FGAPL---PYPIPDEFH 158 (342)
T ss_dssp HTCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-CCSSC---CSSBCTTCC
T ss_pred hcCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh-hCCCC---CCCcCCCCC
Confidence 4 89999999997532 1234567889999999999999998765 789999999955 44322 457889887
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccC-CCCCCCC--chhHHHHHHHHcCCCCCc---cCcC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMG-PVIPPTL--NASMLMLLRLLQGCTDTY---ENFF 223 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G-~~~~~~~--~~~~~~~~~~~~g~~~~~---~~~~ 223 (323)
..+. +.|+.+|.++|.+++.++.+++++.+++|++.+|| |+..... .....++.....|.+... +...
T Consensus 159 ~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T 2hrz_A 159 TTPL------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232 (342)
T ss_dssp CCCS------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred CCCc------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence 6654 67999999999999999888889999999999999 6643221 122344556666765432 2233
Q ss_pred CCcccHHHHHHHHHHhhcCCC----CCccEEEEcCccCHHHHHHHHHHHCCCCC--CCCCCCCCC----CCCccccccch
Q 020608 224 MGSVHFKDVALAHILVYENPS----ACGRHLCVEAISHYGDFVAKVAELYPEYD--IPRLPKDTQ----PGLLRTKDGAK 293 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~~~~~~e~~~~i~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 293 (323)
..++|++|+|++++.+++.+. .++.||++++.+|+.|+++.+.+.+|... .....+... .......+|++
T Consensus 233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 312 (342)
T 2hrz_A 233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAK 312 (342)
T ss_dssp EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCH
T ss_pred eeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChH
Confidence 448999999999999998653 34569988778999999999999886421 111111100 01112357999
Q ss_pred hHhhhCCcc-cCHHHHHHHHHHHHHHcCCCC
Q 020608 294 KLMDLGLQF-IPMDQIIKDSVESLKAKGFIS 323 (323)
Q Consensus 294 ~~~~lG~~~-~~~~~~l~~~~~~~~~~~~~~ 323 (323)
|+++|||+| ++++++|+++++|++ .|.+|
T Consensus 313 k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~~ 342 (342)
T 2hrz_A 313 RARELGFTAESSFEEIIQVHIEDEL-GGSLK 342 (342)
T ss_dssp HHHHTTCCCCSSHHHHHHHHHHHHS-TTCCC
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHhc-CCCCC
Confidence 994499999 999999999999998 44443
No 52
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=1.7e-41 Score=326.02 Aligned_cols=311 Identities=18% Similarity=0.195 Sum_probs=226.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcH-HHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDE-RETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GC 78 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~ 78 (323)
.+++|+|||||||||||++|+++|+++|++|++++|+.... .....+..+. ..+++++.+|++|.+++.++++ ++
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 35678999999999999999999999999999999876432 1112222221 2367889999999999999998 89
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+|||+|+..........+...+++|+.++.+++++|++.++++||++||.+++..........+++|+.+..+.
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~----- 160 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT----- 160 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-----
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC-----
Confidence 999999997543222234567899999999999999998888999999998554322111112467777665543
Q ss_pred CCchHHHHHHHHHHHHHHHHh--CCccEEEEcCCCccCCCCCC----C----CchhHHHHHHHHcC--CCCC-c------
Q 020608 159 EIWYPLSKTLAEKAAWEFAKE--KGLDVVVVNPGTVMGPVIPP----T----LNASMLMLLRLLQG--CTDT-Y------ 219 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~Rp~~v~G~~~~~----~----~~~~~~~~~~~~~g--~~~~-~------ 219 (323)
+.|+.+|.++|.+++.++.+ .+++++++||+++|||.... . .......+.+...+ .+.. +
T Consensus 161 -~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (699)
T 1z45_A 161 -NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS 239 (699)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred -ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccC
Confidence 67999999999999998876 69999999999999985321 0 11222334444433 2332 2
Q ss_pred --cCcCCCcccHHHHHHHHHHhhcCC------C-CCccEEE-EcCccCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCccc
Q 020608 220 --ENFFMGSVHFKDVALAHILVYENP------S-ACGRHLC-VEAISHYGDFVAKVAELYPEYDIPRL-PKDTQPGLLRT 288 (323)
Q Consensus 220 --~~~~~~~i~v~D~a~~~~~~~~~~------~-~~~~~~~-~~~~~~~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 288 (323)
+...++|||++|+|++++.+++.. . .++.||+ +++.+|+.|+++.+++.++.. ++.. .+........+
T Consensus 240 ~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~ 318 (699)
T 1z45_A 240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID-LPYKVTGRRAGDVLNL 318 (699)
T ss_dssp CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC-CCC---------CCCC
T ss_pred CCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCC-CCceecCCCCCccccc
Confidence 334567999999999999988642 1 2346998 477899999999999988643 2221 11111233457
Q ss_pred cccchhH-hhhCCcc-cCHHHHHHHHHHHHHHcCC
Q 020608 289 KDGAKKL-MDLGLQF-IPMDQIIKDSVESLKAKGF 321 (323)
Q Consensus 289 ~~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~~ 321 (323)
.+|++|+ ++|||+| ++++++|+++++|+++++.
T Consensus 319 ~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~ 353 (699)
T 1z45_A 319 TAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF 353 (699)
T ss_dssp CBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 8899999 7899999 9999999999999998764
No 53
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=100.00 E-value=4.3e-42 Score=296.82 Aligned_cols=270 Identities=16% Similarity=0.083 Sum_probs=214.5
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 82 (323)
-|+|||||||||||++|+++|+++|++|++++|+ .+|++|.+++.++++ ++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 4789999999999999999999999999999884 389999999999998 799999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+|+.........++...+++|+.++.+++++|++.++ +|||+||.+++.+.. ..+++|+++..+. +.|
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~----~~~~~E~~~~~~~------~~Y 137 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEA----KEPITEFDEVNPQ------SAY 137 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCC----SSCBCTTSCCCCC------SHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCC----CCCCCCCCCCCCc------cHH
Confidence 99997543223356778999999999999999998887 999999995554332 4578888876554 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcCCCcccHHHHHHHHHHhhc
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFFMGSVHFKDVALAHILVYE 241 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~D~a~~~~~~~~ 241 (323)
+.+|..+|.+++.++ .+++++||+.+||| .. .....++..+..+.+.. .++...+++|++|+|++++.+++
T Consensus 138 ~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 209 (292)
T 1vl0_A 138 GKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID 209 (292)
T ss_dssp HHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHh
Confidence 999999999997653 47999999999999 22 22334445555565543 45666779999999999999998
Q ss_pred CCCCCccEEEE-cCccCHHHHHHHHHHHCCCCC----CCCCCCC-CCCCCccccccchhH-hhhCCcccCHHHHHHHHHH
Q 020608 242 NPSACGRHLCV-EAISHYGDFVAKVAELYPEYD----IPRLPKD-TQPGLLRTKDGAKKL-MDLGLQFIPMDQIIKDSVE 314 (323)
Q Consensus 242 ~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~-~~lG~~~~~~~~~l~~~~~ 314 (323)
++ .++.||++ ++.+|+.|+++.+.+.+|... +|..... .........+|++|+ +.|||+|.+++++|+++++
T Consensus 210 ~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~ 288 (292)
T 1vl0_A 210 EK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYID 288 (292)
T ss_dssp HT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHH
T ss_pred cC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 76 56679975 678999999999999987421 2211111 112234578999999 6799999999999999999
Q ss_pred HHH
Q 020608 315 SLK 317 (323)
Q Consensus 315 ~~~ 317 (323)
|++
T Consensus 289 ~~~ 291 (292)
T 1vl0_A 289 LLQ 291 (292)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 54
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=1.8e-41 Score=323.43 Aligned_cols=308 Identities=16% Similarity=0.174 Sum_probs=232.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhH-HHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDA-IAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~ 80 (323)
+++|+|||||||||||++|+++|+++ |++|++++|+...... +. ...+++++.+|++|.++ ++++++++|+
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~------~~-~~~~v~~v~~Dl~d~~~~~~~~~~~~D~ 385 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR------FL-NHPHFHFVEGDISIHSEWIEYHVKKCDV 385 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG------GT-TCTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh------hc-cCCceEEEECCCCCcHHHHHHhhcCCCE
Confidence 36789999999999999999999998 8999999998643221 11 13478999999999765 7788889999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhh-ccCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC-RQNE 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~ 159 (323)
|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.+++.... ..+++|+++..+..+ ..+.
T Consensus 386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~----~~~~~E~~~~~~~~p~~~p~ 460 (660)
T 1z7e_A 386 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCS----DKYFDEDHSNLIVGPVNKPR 460 (660)
T ss_dssp EEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCC----SSSBCTTTCCEEECCTTCTT
T ss_pred EEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCC----CcccCCCccccccCcccCCC
Confidence 999999754322234567789999999999999999988 8999999985554332 456788875321100 1223
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCC-------CCchhHHHHHHHHcCCCCC-c--cCcCCCcccH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPP-------TLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHF 229 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v 229 (323)
+.|+.+|.++|.+++.+++++|++++++||+++|||+... .......++..+..|.+.. . ++..++|+|+
T Consensus 461 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v 540 (660)
T 1z7e_A 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 540 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEH
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEH
Confidence 5699999999999999988889999999999999998642 1223345566677777654 2 3456679999
Q ss_pred HHHHHHHHHhhcCCC---CCccEEEEc-C-ccCHHHHHHHHHHHCCCC----CCCCCCC-----------CCCCCCcccc
Q 020608 230 KDVALAHILVYENPS---ACGRHLCVE-A-ISHYGDFVAKVAELYPEY----DIPRLPK-----------DTQPGLLRTK 289 (323)
Q Consensus 230 ~D~a~~~~~~~~~~~---~~~~~~~~~-~-~~~~~e~~~~i~~~~~~~----~~~~~~~-----------~~~~~~~~~~ 289 (323)
+|+|++++.+++++. .++.||+++ + .+|+.|+++.+.+.+|.. .+|.+.. ..........
T Consensus 541 ~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (660)
T 1z7e_A 541 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRK 620 (660)
T ss_dssp HHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCC
T ss_pred HHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcc
Confidence 999999999998764 344699864 4 799999999999887532 1222110 0001233567
Q ss_pred ccchhH-hhhCCcc-cCHHHHHHHHHHHHHHcCCC
Q 020608 290 DGAKKL-MDLGLQF-IPMDQIIKDSVESLKAKGFI 322 (323)
Q Consensus 290 ~~~~~~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~ 322 (323)
+|++|+ ++|||+| ++++++|+++++|++++..+
T Consensus 621 ~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~ 655 (660)
T 1z7e_A 621 PSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 655 (660)
T ss_dssp BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred cCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence 899999 7799999 99999999999999988754
No 55
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=100.00 E-value=7.2e-41 Score=288.26 Aligned_cols=265 Identities=14% Similarity=0.076 Sum_probs=202.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
.|||+|||||| ||||++|+++|+++|++|++++|++.+... +.. .+++++.+|++|.+ +.++|+||
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~-----~~~~~~~~D~~d~~-----~~~~d~vi 68 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA---IRA-----SGAEPLLWPGEEPS-----LDGVTHLL 68 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH---HHH-----TTEEEEESSSSCCC-----CTTCCEEE
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh---Hhh-----CCCeEEEecccccc-----cCCCCEEE
Confidence 35689999998 999999999999999999999997643322 111 37899999999955 78999999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhh--CCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKA--LGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|+|+..... . ..+.++++++++ .++++|||+||.+ +|+... ..+++|+++..|. +
T Consensus 69 ~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~-vyg~~~---~~~~~E~~~~~p~------~ 125 (286)
T 3ius_A 69 ISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTA-VYGDHD---GAWVDETTPLTPT------A 125 (286)
T ss_dssp ECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGG-GGCCCT---TCEECTTSCCCCC------S
T ss_pred ECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecce-ecCCCC---CCCcCCCCCCCCC------C
Confidence 999864321 1 125688899888 6789999999995 454432 5688999887665 7
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC--ccCcCCCcccHHHHHHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT--YENFFMGSVHFKDVALAHIL 238 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~v~D~a~~~~~ 238 (323)
.|+.+|..+|.+++.+ .+++++++||+.+|||+... +.++..|.+.. .+.+.++|+|++|+|++++.
T Consensus 126 ~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 194 (286)
T 3ius_A 126 ARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAA 194 (286)
T ss_dssp HHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS--------STTSSSSCCCEEECTTCCBCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchH--------HHHHhcCCccccCCCCcccceEEHHHHHHHHHH
Confidence 8999999999999765 58999999999999997543 12334555444 23456779999999999999
Q ss_pred hhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCCC-CCC-------CccccccchhH-hhhCCcc-c-CHH
Q 020608 239 VYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKDT-QPG-------LLRTKDGAKKL-MDLGLQF-I-PMD 306 (323)
Q Consensus 239 ~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~-~~lG~~~-~-~~~ 306 (323)
+++++..++.||++ ++.+|+.|+++.+.+.+|....+...... ... .....+|++|+ +.|||+| + +++
T Consensus 195 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~ 274 (286)
T 3ius_A 195 SMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYR 274 (286)
T ss_dssp HHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHH
T ss_pred HHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHH
Confidence 99988766689985 67899999999999999753211111111 011 14567899999 6699999 7 799
Q ss_pred HHHHHHHHH
Q 020608 307 QIIKDSVES 315 (323)
Q Consensus 307 ~~l~~~~~~ 315 (323)
++|+++++.
T Consensus 275 e~l~~~~~~ 283 (286)
T 3ius_A 275 VGLEALQAD 283 (286)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998763
No 56
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=1.2e-39 Score=290.00 Aligned_cols=294 Identities=18% Similarity=0.124 Sum_probs=222.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC-----CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR-----YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG-- 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-- 77 (323)
+|+|||||||||||++|+++|+++| ++|++++|+++... . ...+++++.+|++|.+++.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------H--EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------C--CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------c--ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 4799999999999999999999999 99999999865422 1 124788999999999999999998
Q ss_pred -CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEE-------EecccccccCCCCCCCCccccCC
Q 020608 78 -CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVV-------VTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 78 -~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v-------~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
+|+|||+|+.. ..++...+++|+.++.+++++|++. ++++|| |+||.++ |+... ....+++|+
T Consensus 72 ~~d~vih~a~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v-yg~~~-~~~~~~~E~ 144 (364)
T 2v6g_A 72 DVTHVFYVTWAN-----RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES-YGKIE-SHDPPYTED 144 (364)
T ss_dssp TCCEEEECCCCC-----CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG-TTTSC-CCCSSBCTT
T ss_pred CCCEEEECCCCC-----cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh-ccccc-cCCCCCCcc
Confidence 99999999874 2457789999999999999999987 788998 7999854 44321 014578888
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhCC-ccEEEEcCCCccCCCCCCCCch-hHH-HHHHH--HcCCCCC-ccC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKG-LDVVVVNPGTVMGPVIPPTLNA-SML-MLLRL--LQGCTDT-YEN 221 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~Rp~~v~G~~~~~~~~~-~~~-~~~~~--~~g~~~~-~~~ 221 (323)
++..+. .+.| ..+|.+++.++++++ ++++++||+.+|||+....... ... ++..+ ..|.+.. .++
T Consensus 145 ~~~~~~-----~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 215 (364)
T 2v6g_A 145 LPRLKY-----MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGC 215 (364)
T ss_dssp SCCCSS-----CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred ccCCcc-----chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCC
Confidence 776541 2457 358888888887677 9999999999999987532221 122 23333 2566554 343
Q ss_pred -----cCCCcccHHHHHHHHHHhhcCCCCCc-cEEEE-cCccCHHHHHHHHHHHCCCCC------CCCCC----------
Q 020608 222 -----FFMGSVHFKDVALAHILVYENPSACG-RHLCV-EAISHYGDFVAKVAELYPEYD------IPRLP---------- 278 (323)
Q Consensus 222 -----~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~~~~e~~~~i~~~~~~~~------~~~~~---------- 278 (323)
...+++|++|+|++++.+++++...| .||++ ++.+|+.|+++.+.+.+|... +|...
T Consensus 216 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 295 (364)
T 2v6g_A 216 KAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPV 295 (364)
T ss_dssp HHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHH
T ss_pred cccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHH
Confidence 23568999999999999998775444 69986 567999999999999987431 12110
Q ss_pred -------CC-CCCC--C------------cc-ccccchhHhhhCCcc-cCHHHHHHHHHHHHHHcCCCC
Q 020608 279 -------KD-TQPG--L------------LR-TKDGAKKLMDLGLQF-IPMDQIIKDSVESLKAKGFIS 323 (323)
Q Consensus 279 -------~~-~~~~--~------------~~-~~~~~~~~~~lG~~~-~~~~~~l~~~~~~~~~~~~~~ 323 (323)
.. .... . .. ..+|++|+++|||+| ++++++|+++++|++++|++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 296 WEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp HHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 00 0000 0 23 478999995599999 999999999999999999886
No 57
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=274.33 Aligned_cols=272 Identities=22% Similarity=0.210 Sum_probs=197.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|||||||||||||++|+++|+++||+|+++.|++... . +..| +...+.++++|+|||+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~--------------~---~~~~----~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG--------------R---ITWD----ELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------E---EEHH----HHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC--------------e---eecc----hhhHhhccCCCEEEEec
Confidence 6899999999999999999999999999999975321 1 1222 22345577999999999
Q ss_pred cCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhCCc--CEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 86 SPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKALGV--KRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 86 ~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
+...... +.......++.|+.+|.+++++++..+. +.||+.||+ .+|+... ..+++|+++..+.
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~---~~~~~E~~p~~~~------ 129 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSL---TAEYDEDSPGGDF------ 129 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCS---SCCBCTTCCCSCS------
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeee-eeecCCC---CCcccccCCcccc------
Confidence 8643221 2233456788999999999999987764 468888888 5555443 6678898876654
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC--ccCcCCCcccHHHHHHHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT--YENFFMGSVHFKDVALAHI 237 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~v~D~a~~~~ 237 (323)
+.|+..|...|.... ....+++++++||+.||||+. .....++.....|.... .+++.++|||++|+|++++
T Consensus 130 ~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~ 203 (298)
T 4b4o_A 130 DFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILT 203 (298)
T ss_dssp SHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHH
Confidence 457777777665432 235689999999999999973 22233344444455444 4566788999999999999
Q ss_pred HhhcCCCCCccEEE-EcCccCHHHHHHHHHHHCCCCC---CCCCCCCCCCC-------CccccccchhHhhhCCcc--cC
Q 020608 238 LVYENPSACGRHLC-VEAISHYGDFVAKVAELYPEYD---IPRLPKDTQPG-------LLRTKDGAKKLMDLGLQF--IP 304 (323)
Q Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~e~~~~i~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~lG~~~--~~ 304 (323)
.+++++...|.||+ +++++|++|+++.+++.++... +|.+..+.... ..+..++++|++++||++ ++
T Consensus 204 ~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~ 283 (298)
T 4b4o_A 204 HALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPE 283 (298)
T ss_dssp HHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCS
T ss_pred HHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCC
Confidence 99999888889998 4788999999999999997532 11111000000 023457889999999998 57
Q ss_pred HHHHHHHHHH
Q 020608 305 MDQIIKDSVE 314 (323)
Q Consensus 305 ~~~~l~~~~~ 314 (323)
++++|+++++
T Consensus 284 l~~al~~l~~ 293 (298)
T 4b4o_A 284 LGAALKEIAE 293 (298)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988776
No 58
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.5e-37 Score=254.68 Aligned_cols=223 Identities=21% Similarity=0.238 Sum_probs=172.3
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|+ +||+|||||||||||++++++|+++|++|++++|++++.. ....+++++.+|++|.+++.++++++|+
T Consensus 1 M~-~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 1 ME-KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK---------IENEHLKVKKADVSSLDEVCEVCKGADA 70 (227)
T ss_dssp ---CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC---------CCCTTEEEECCCTTCHHHHHHHHTTCSE
T ss_pred CC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch---------hccCceEEEEecCCCHHHHHHHhcCCCE
Confidence 55 5789999999999999999999999999999999753221 1125789999999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+|+.. ... ...+++|+.++.++++++++.++++||++||.+++++.. . ...|+.+..|. +
T Consensus 71 vi~~a~~~-----~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~----~-~~~~~~~~~p~------~ 133 (227)
T 3dhn_A 71 VISAFNPG-----WNN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP----G-LRLMDSGEVPE------N 133 (227)
T ss_dssp EEECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET----T-EEGGGTTCSCG------G
T ss_pred EEEeCcCC-----CCC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC----C-CccccCCcchH------H
Confidence 99999863 112 237899999999999999999999999999997776653 2 23444444443 6
Q ss_pred chHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC-CCccCcCCCcccHHHHHHHHHHh
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT-DTYENFFMGSVHFKDVALAHILV 239 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~i~v~D~a~~~~~~ 239 (323)
.|+.+|..+|.+++.++++++++++++||+.+|||+...... ..+.. .......++|+|++|+|++++.+
T Consensus 134 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~Dva~ai~~~ 204 (227)
T 3dhn_A 134 ILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRY---------RLGKDDMIVDIVGNSHISVEDYAAAMIDE 204 (227)
T ss_dssp GHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCC---------EEESSBCCCCTTSCCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccce---------eecCCCcccCCCCCcEEeHHHHHHHHHHH
Confidence 799999999999998887789999999999999997653321 12222 22222337899999999999999
Q ss_pred hcCCCCCcc-EEEE-cCccCHH
Q 020608 240 YENPSACGR-HLCV-EAISHYG 259 (323)
Q Consensus 240 ~~~~~~~~~-~~~~-~~~~~~~ 259 (323)
++++...|+ |+++ +++.++.
T Consensus 205 l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 205 LEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp HHSCCCCSEEEEEECCSCCC--
T ss_pred HhCccccCcEEEEEeehhcccC
Confidence 999886555 8875 6777764
No 59
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.9e-38 Score=289.67 Aligned_cols=278 Identities=15% Similarity=0.126 Sum_probs=200.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|||||||||||++|+++|+++|++|++++|+..+. ..+.+|+.+. +.++++++|+|||+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence 78999999999999999999999999999999986432 1256787653 35667899999999
Q ss_pred ccCCccCC-CCCchhhhhhHHHHHHHHHHHH-HhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 85 ASPCIVDK-VEDPQNQLLNPAVKGTVNVLTA-AKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 85 a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+...... ....+...+++|+.++.+++++ +++.++++|||+||+++|..... ..+++|+.+. + .+.|
T Consensus 209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~---~~~~~E~~~~-~------~~~y 278 (516)
T 3oh8_A 209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRG---DEILTEESES-G------DDFL 278 (516)
T ss_dssp CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEE---EEEECTTSCC-C------SSHH
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCC---CCccCCCCCC-C------cChH
Confidence 99754422 3455677899999999999999 66677899999999955431322 5678888775 2 2669
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC--ccCcCCCcccHHHHHHHHHHhh
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT--YENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~v~D~a~~~~~~~ 240 (323)
+.+|...|.++..+ ...|++++++||+.+|||+. .....+...+..|.... .+++.++|||++|+|++++.++
T Consensus 279 ~~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l 353 (516)
T 3oh8_A 279 AEVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAI 353 (516)
T ss_dssp HHHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHH
Confidence 99999999876544 46799999999999999973 12222333333343333 3445677999999999999999
Q ss_pred cCCCCCccEEE-EcCccCHHHHHHHHHHHCCCC---CCCCCCCCCCCC--------CccccccchhHhhhCCcc-cC-HH
Q 020608 241 ENPSACGRHLC-VEAISHYGDFVAKVAELYPEY---DIPRLPKDTQPG--------LLRTKDGAKKLMDLGLQF-IP-MD 306 (323)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~~e~~~~i~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~lG~~~-~~-~~ 306 (323)
+++...|.||+ +++.+|+.|+++.+++.+|.. .+|.+....... .....++++|+++|||+| ++ ++
T Consensus 354 ~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~ 433 (516)
T 3oh8_A 354 VDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIG 433 (516)
T ss_dssp HCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHH
T ss_pred hCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHH
Confidence 98877788997 477899999999999988643 223222111111 123567889998899999 65 99
Q ss_pred HHHHHHHHH
Q 020608 307 QIIKDSVES 315 (323)
Q Consensus 307 ~~l~~~~~~ 315 (323)
++|+++++.
T Consensus 434 e~l~~~l~~ 442 (516)
T 3oh8_A 434 AAIAHELGY 442 (516)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCc
Confidence 999999864
No 60
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=1.9e-37 Score=281.55 Aligned_cols=306 Identities=14% Similarity=0.066 Sum_probs=217.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhh-c---------cCCCCCeEEEEccCCCHhHHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKA-L---------EGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~---------~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
+.+|+|||||||||||++|+++|++.|++|+++.|+.........+.+ + .....+++++.+|++|.+.+.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 357899999999999999999999999999999998763332222211 0 011257999999999988877
Q ss_pred HHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCC-CCCCccccCCCCCC
Q 020608 73 AAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPK-WPADKVKDEDCWTD 151 (323)
Q Consensus 73 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~~~~e~~~~~ 151 (323)
.+.++|+|||+|+.... ..++...+++|+.++.+++++|++ ++++|||+||.++ +.... .....+++|+++..
T Consensus 147 -~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~ 220 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK 220 (427)
T ss_dssp -CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS
T ss_pred -CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccccc
Confidence 77799999999997543 356678999999999999999988 7789999999966 22111 11256888988743
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC------chhHHHHHHHHcCCCCCc--cCcC
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL------NASMLMLLRLLQGCTDTY--ENFF 223 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~~--~~~~ 223 (323)
+. .+.+.|+.+|.++|.+++.++ +.|++++++||++||||...... .....++.....+..... ++..
T Consensus 221 ~~---~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (427)
T 4f6c_A 221 GQ---LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP 296 (427)
T ss_dssp SC---CCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCE
T ss_pred CC---CCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccce
Confidence 32 234779999999999999986 47999999999999999765431 123455666666655443 5677
Q ss_pred CCcccHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCCC--CCC-----CCC---------CCCc
Q 020608 224 MGSVHFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIPR--LPK-----DTQ---------PGLL 286 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~--~~~-----~~~---------~~~~ 286 (323)
++|+|++|+|++++.++..+..++.||++ ++++++.|+++.+.+ ++...++. |.. ... ....
T Consensus 297 ~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 375 (427)
T 4f6c_A 297 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSVDREQQ 375 (427)
T ss_dssp ECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHHHHTSE
T ss_pred EEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhccccCC
Confidence 88999999999999999887766679985 678999999999998 44111110 000 000 0111
Q ss_pred cccccchhH----hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 287 RTKDGAKKL----MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 287 ~~~~~~~~~----~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
...+|+++. +++||.+ ..-++.++++++|+++.
T Consensus 376 ~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 376 LAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp ECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 345566554 5569998 44466899999988764
No 61
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=2e-37 Score=264.84 Aligned_cols=262 Identities=16% Similarity=0.155 Sum_probs=201.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih 83 (323)
|+|||||||||||++++++|+ +|++|++++|++... .+ +.+|++|++++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------------GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 479999999999999999999 589999999976321 12 78999999999999885 999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+........+++...+++|+.++.++++++++.++ +||++||.+++.+. ..+++|+++..+. +.|+
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~-----~~~~~e~~~~~~~------~~Y~ 131 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGE-----KGNYKEEDIPNPI------NYYG 131 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSS-----SCSBCTTSCCCCS------SHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCC-----CCCcCCCCCCCCC------CHHH
Confidence 9997543222346778999999999999999998876 99999999665433 2377888776553 6799
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcCCCcccHHHHHHHHHHhhcC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+|.++|.+++. ++++++||+.+||+. .....++..+..+.+.. .++ ..+++|++|+|++++.++++
T Consensus 132 ~sK~~~e~~~~~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~ 199 (273)
T 2ggs_A 132 LSKLLGETFALQ------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLEL 199 (273)
T ss_dssp HHHHHHHHHHCC------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhc
Confidence 999999999854 688999999999831 12223344555665543 344 66799999999999999987
Q ss_pred CCCCccEEEEcCccCHHHHHHHHHHHCCCCCC---CCCC-CCCCCCCccccccchhH-hhhCCcc--cCHHHHH
Q 020608 243 PSACGRHLCVEAISHYGDFVAKVAELYPEYDI---PRLP-KDTQPGLLRTKDGAKKL-MDLGLQF--IPMDQII 309 (323)
Q Consensus 243 ~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~-~~lG~~~--~~~~~~l 309 (323)
+. .+.||++++.+|+.|+++.+.+.+|.... +... ...........+|++|+ +.|||+| ++++++|
T Consensus 200 ~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 200 RK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp TC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred Cc-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 64 56899866889999999999999975321 1111 11112234578999999 6799998 6888875
No 62
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-36 Score=274.87 Aligned_cols=258 Identities=19% Similarity=0.133 Sum_probs=194.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC---CCEEEEEecCCCcHHHHHHHhhccCC-------------CCCeEEEEccCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER---RYTVHATVKNLSDERETAHLKALEGA-------------DTRLRLFQIDLL 66 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~ 66 (323)
.++|+|||||||||||++|+++|+++ |++|++++|+.++......+.+.... ..+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 46899999999999999999999999 89999999987654443333222111 258999999998
Q ss_pred ------CHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCC
Q 020608 67 ------DYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 67 ------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
+.+.+.++++++|+|||+|+.... .++...+++|+.++.+++++|++.++++|||+||.++ |+...
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v-~~~~~--- 222 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADV-GAAIE--- 222 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGG-GTTSC---
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhh-cCccC---
Confidence 667889999999999999998644 5566789999999999999999999999999999854 44432
Q ss_pred CccccCCCCCChhhh-----ccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCC----CchhHHHHHHH
Q 020608 141 DKVKDEDCWTDEEYC-----RQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPT----LNASMLMLLRL 211 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~-----~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~----~~~~~~~~~~~ 211 (323)
..+++|+.+..+..+ ....+.|+.+|.++|.+++.++.+.|++++++||++||||..... ......++...
T Consensus 223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~ 302 (478)
T 4dqv_A 223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL 302 (478)
T ss_dssp TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence 557788876554311 011255999999999999999887899999999999999864221 12222333322
Q ss_pred -HcCCCC-Cc---------cCcCCCcccHHHHHHHHHHhhcC----CC-CCccEEEE-cCc--cCHHHHHHHHHHH
Q 020608 212 -LQGCTD-TY---------ENFFMGSVHFKDVALAHILVYEN----PS-ACGRHLCV-EAI--SHYGDFVAKVAEL 268 (323)
Q Consensus 212 -~~g~~~-~~---------~~~~~~~i~v~D~a~~~~~~~~~----~~-~~~~~~~~-~~~--~~~~e~~~~i~~~ 268 (323)
..|... .+ ++..++++|++|+|++++.++.+ +. .++.||++ ++. +++.|+++.+.+.
T Consensus 303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 223311 11 14567799999999999999875 33 34569985 555 9999999999985
No 63
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=100.00 E-value=2.1e-36 Score=266.74 Aligned_cols=236 Identities=16% Similarity=0.148 Sum_probs=188.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC-CC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER-RY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+++|+|||||||||||++|+++|+++ |+ +|++++|++.+.. .....+. ..+++++.+|++|.+.+.++++++|+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~--~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS--EMAMEFN--DPRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH--HHHHHHC--CTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH--HHHHHhc--CCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 45789999999999999999999999 97 9999999643221 1112222 24789999999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|||+||....+....++.+.+++|+.++.+++++|.+.++++||++||..++.+ .+
T Consensus 95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p------------------------~~ 150 (344)
T 2gn4_A 95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP------------------------IN 150 (344)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC------------------------CS
T ss_pred EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC------------------------cc
Confidence 999999865433334567899999999999999999999999999999854322 14
Q ss_pred chHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC-CCCc--cCcCCCcccHHHHHH
Q 020608 161 WYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC-TDTY--ENFFMGSVHFKDVAL 234 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~i~v~D~a~ 234 (323)
.|+.+|.++|.++..++.+ .+++++++|||+||||... ....+...+..|. +... +...+.|+|++|+|+
T Consensus 151 ~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~ 226 (344)
T 2gn4_A 151 LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVS 226 (344)
T ss_dssp HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHH
Confidence 5999999999999988754 5899999999999998632 2334555666676 4443 344456999999999
Q ss_pred HHHHhhcCCCCCccEEEEcCccCHHHHHHHHHHHCC
Q 020608 235 AHILVYENPSACGRHLCVEAISHYGDFVAKVAELYP 270 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~ 270 (323)
+++.++++...+..|++++..+++.|+++.+.+.++
T Consensus 227 ~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 227 FVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred HHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence 999999876555568887778999999999987653
No 64
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=100.00 E-value=4.1e-36 Score=256.00 Aligned_cols=235 Identities=20% Similarity=0.202 Sum_probs=188.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|||||||||||++|+++|+++|++|++++|++.... ..+++++.+|++|.+.+.++++++|+|||+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 70 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVKDCDGIIHL 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence 579999999999999999999999999999999764311 135788999999999999999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+.. ...++...+++|+.++.++++++++.++++||++||.+++..... ..+++|+++..|. +.|+.
T Consensus 71 a~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~---~~~~~E~~~~~~~------~~Y~~ 137 (267)
T 3ay3_A 71 GGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR---TTRIDTEVPRRPD------SLYGL 137 (267)
T ss_dssp CSCC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT---TSCBCTTSCCCCC------SHHHH
T ss_pred CcCC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC---CCCCCCCCCCCCC------ChHHH
Confidence 9874 345667899999999999999999988899999999966544332 4578888876554 67999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 165 SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
+|..+|.+++.++.+++++++++||+.+|+... .+....+++|++|+|++++.+++++.
T Consensus 138 sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~~~~ 196 (267)
T 3ay3_A 138 SKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFVAPK 196 (267)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHhCCC
Confidence 999999999998878899999999999994211 01122458999999999999998765
Q ss_pred CC-ccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCCCCCCCccccccchhHhhhCCcc-cCHHHHHHHHHH
Q 020608 245 AC-GRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKDTQPGLLRTKDGAKKLMDLGLQF-IPMDQIIKDSVE 314 (323)
Q Consensus 245 ~~-~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~l~~~~~ 314 (323)
.+ +.|++.+.. .....|..+++.|||+| ++++++++++.+
T Consensus 197 ~~~~~~~~~~~~------------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 197 LGCTVVYGASAN------------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp CCEEEEEECCSC------------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred CCceeEecCCCc------------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 43 345553210 11234556667899999 999999998764
No 65
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-36 Score=281.25 Aligned_cols=305 Identities=14% Similarity=0.060 Sum_probs=217.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhh-c---------cCCCCCeEEEEccCCCHhHHHH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKA-L---------EGADTRLRLFQIDLLDYDAIAA 73 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~---------~~~~~~~~~~~~Dl~~~~~~~~ 73 (323)
.+|+|||||||||||++|+++|++.|++|++++|+.........+.. + .....+++++.+|+++++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 36899999999999999999999899999999998764322222211 0 011358999999999987777
Q ss_pred HhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCC-CCCCccccCCCCCCh
Q 020608 74 AVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPK-WPADKVKDEDCWTDE 152 (323)
Q Consensus 74 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~~~~e~~~~~~ 152 (323)
++.++|+|||+|+.... ..++...+++|+.++.+++++|++ +.++|||+||.++ +.... .....+++|+++..+
T Consensus 228 ~~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~ 302 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG 302 (508)
T ss_dssp CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSS
T ss_pred CccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccccc
Confidence 77799999999997532 345677889999999999999988 6789999999966 21111 112568888887433
Q ss_pred hhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC------chhHHHHHHHHcCCCCCc--cCcCC
Q 020608 153 EYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL------NASMLMLLRLLQGCTDTY--ENFFM 224 (323)
Q Consensus 153 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~~--~~~~~ 224 (323)
. .+.+.|+.+|..+|.+++.++ +.|++++++||+.||||...... .....++.....+..... +++.+
T Consensus 303 ~---~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~ 378 (508)
T 4f6l_B 303 Q---LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPV 378 (508)
T ss_dssp B---CCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEE
T ss_pred c---cCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceE
Confidence 2 244779999999999999976 47999999999999999765431 123455555555554433 45677
Q ss_pred CcccHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHCCCCCCC--CCCC---CC-----------CCCCcc
Q 020608 225 GSVHFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELYPEYDIP--RLPK---DT-----------QPGLLR 287 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~--~~~~---~~-----------~~~~~~ 287 (323)
+|+|++|+|++++.++.++..++.||++ ++.+++.|+++.+.+.. ...++ .|.. .. ......
T Consensus 379 ~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~ 457 (508)
T 4f6l_B 379 DFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQL 457 (508)
T ss_dssp ECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEE
T ss_pred EEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcc
Confidence 7999999999999999877666679985 67899999999999754 11110 0000 00 001123
Q ss_pred ccccchhH----hhhCCcc-cCHHHHHHHHHHHHHHc
Q 020608 288 TKDGAKKL----MDLGLQF-IPMDQIIKDSVESLKAK 319 (323)
Q Consensus 288 ~~~~~~~~----~~lG~~~-~~~~~~l~~~~~~~~~~ 319 (323)
..+|+++. +++||.+ ...++.++++++|+++.
T Consensus 458 ~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 458 AMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp CEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred eecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 45565553 5679998 55577899999988764
No 66
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=100.00 E-value=8.4e-35 Score=261.22 Aligned_cols=236 Identities=13% Similarity=0.069 Sum_probs=188.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHH-HHHhh-ccCCCCCeEEEEccCCCHhHHHHHh--cCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERET-AHLKA-LEGADTRLRLFQIDLLDYDAIAAAV--TGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~ 78 (323)
++|+|||||||||||++|+++|+++| ++|++++|+....... ..+.. ......+++++.+|++|.+.+..++ .++
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 47899999999999999999999999 7999999865332221 11111 1111357899999999999888877 489
Q ss_pred CEEEEcccCCccCCCCCch---hhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhh
Q 020608 79 TGVFHLASPCIVDKVEDPQ---NQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC 155 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 155 (323)
|+|||+||...++ ...++ ...+++|+.|+.+++++|++.++++||++||.....+
T Consensus 114 D~Vih~Aa~~~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~~~~~p--------------------- 171 (399)
T 3nzo_A 114 DYVLNLSALKHVR-SEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANP--------------------- 171 (399)
T ss_dssp SEEEECCCCCCGG-GGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCSCSSCC---------------------
T ss_pred CEEEECCCcCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC---------------------
Confidence 9999999987665 44444 6899999999999999999999999999999632211
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcCCCcccHHHHHH
Q 020608 156 RQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFFMGSVHFKDVAL 234 (323)
Q Consensus 156 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~D~a~ 234 (323)
.+.|+.+|..+|.+++.++.+ ++++++||+++|||.. .....++..+..|.+.. .++..+.|+|++|+|+
T Consensus 172 ---~~~Yg~sK~~~E~~~~~~~~~--~~~~~vR~g~v~G~~~----~~i~~~~~~i~~g~~~~~~gd~~r~~v~v~D~a~ 242 (399)
T 3nzo_A 172 ---VNMMGASKRIMEMFLMRKSEE--IAISTARFANVAFSDG----SLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGE 242 (399)
T ss_dssp ---CSHHHHHHHHHHHHHHHHTTT--SEEEEECCCEETTCTT----SHHHHHHHHHHTTCCEEEESSCEECEECHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHHHHhhh--CCEEEeccceeeCCCC----chHHHHHHHHHhCCCEecCCCCeeccCCHHHHHH
Confidence 156999999999999988754 9999999999999863 33445667777887765 5677777999999999
Q ss_pred HHHHhhcCCCCCccEEEE-cCc---cCHHHHHHHHHHHCC
Q 020608 235 AHILVYENPSACGRHLCV-EAI---SHYGDFVAKVAELYP 270 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~---~~~~e~~~~i~~~~~ 270 (323)
+++.++.....+..|++. +++ +|+.|+++.+.+.+|
T Consensus 243 ~~~~a~~~~~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G 282 (399)
T 3nzo_A 243 LCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQLG 282 (399)
T ss_dssp HHHHHHHHCCTTEEEEECCCTTCCCEEHHHHHHHHHHHTT
T ss_pred HHHHHhccCCCCCEEEecCCCCCCcccHHHHHHHHHHHhC
Confidence 999999876555568763 555 999999999999997
No 67
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=100.00 E-value=7e-35 Score=248.26 Aligned_cols=214 Identities=23% Similarity=0.243 Sum_probs=177.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
|+||+|||||||||||++|+++|+++|++|++++|++.... ..+++++.+|++|.+++.++++++|+||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 69 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIV 69 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 35789999999999999999999999999999999864322 3478999999999999999999999999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
|+||.. ...++...+++|+.++.++++++++.+.++||++||.+++..... ..+++|+.+..+. +.|
T Consensus 70 ~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~---~~~~~e~~~~~~~------~~Y 136 (267)
T 3rft_A 70 HLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ---TERLGPDVPARPD------GLY 136 (267)
T ss_dssp ECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT---TSCBCTTSCCCCC------SHH
T ss_pred ECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC---CCCCCCCCCCCCC------ChH
Confidence 999983 456788899999999999999999999899999999977654433 5678888776554 779
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcC
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
+.||.++|.+++.++.+++++++++||+.+||+.... ....+|+|++|+++++..+++.
T Consensus 137 ~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~---------------------~~~~~~~~~~d~a~~~~~~~~~ 195 (267)
T 3rft_A 137 GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY---------------------RMLSTWFSHDDFVSLIEAVFRA 195 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST---------------------THHHHBCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC---------------------CceeeEEcHHHHHHHHHHHHhC
Confidence 9999999999999998899999999999999974321 1223478999999999999988
Q ss_pred CCCCc-cEE-EEcCccCHHHH
Q 020608 243 PSACG-RHL-CVEAISHYGDF 261 (323)
Q Consensus 243 ~~~~~-~~~-~~~~~~~~~e~ 261 (323)
+..++ .++ ++++..++.++
T Consensus 196 ~~~~~~~~~~~s~~~~~~~~~ 216 (267)
T 3rft_A 196 PVLGCPVVWGASANDAGWWDN 216 (267)
T ss_dssp SCCCSCEEEECCCCTTCCBCC
T ss_pred CCCCceEEEEeCCCCCCcccC
Confidence 76644 444 46665555444
No 68
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=100.00 E-value=1e-34 Score=249.91 Aligned_cols=255 Identities=17% Similarity=0.196 Sum_probs=191.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
|+|||||||||||++++++|+++ |++|++++|++.+... +.. .+++++.+|++|.+++.++++++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST---LAD-----QGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH---HHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH---Hhh-----cCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 57999999999999999999998 9999999997654322 111 2678899999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+.. . . . ++|+.++.+++++|++.++++||++||.+++ ..+ ..|+
T Consensus 73 ~a~~~-~----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~-----------------------~~y~ 118 (287)
T 2jl1_A 73 ISGPH-Y----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESI-----------------------IPLA 118 (287)
T ss_dssp CCCCC-S----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG-GCC-----------------------STHH
T ss_pred cCCCC-c----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CCC-----------------------CchH
Confidence 99852 1 1 1 6799999999999999999999999998543 110 2499
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC-CccCcCCCcccHHHHHHHHHHhhcC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD-TYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+|..+|.+++ +++++++++||+.++|+... .... .....+... ..+++.++|+|++|+|++++.++++
T Consensus 119 ~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 188 (287)
T 2jl1_A 119 HVHLATEYAIR----TTNIPYTFLRNALYTDFFVN---EGLR---ASTESGAIVTNAGSGIVNSVTRNELALAAATVLTE 188 (287)
T ss_dssp HHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS---GGGH---HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHH----HcCCCeEEEECCEeccccch---hhHH---HHhhCCceeccCCCCccCccCHHHHHHHHHHHhcC
Confidence 99999999885 46899999999999886421 1111 112233322 2456677899999999999999987
Q ss_pred CCC-CccEEEE-cCccCHHHHHHHHHHHCCCCCCCCCCCC-----------CCCC--------------CccccccchhH
Q 020608 243 PSA-CGRHLCV-EAISHYGDFVAKVAELYPEYDIPRLPKD-----------TQPG--------------LLRTKDGAKKL 295 (323)
Q Consensus 243 ~~~-~~~~~~~-~~~~~~~e~~~~i~~~~~~~~~~~~~~~-----------~~~~--------------~~~~~~~~~~~ 295 (323)
+.. +..||++ ++.+|+.|+++.+.+.+|... +..... ..+. ...+..|++++
T Consensus 189 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (287)
T 2jl1_A 189 EGHENKTYNLVSNQPWTFDELAQILSEVSGKKV-VHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDL 267 (287)
T ss_dssp SSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCC-EEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHH
T ss_pred CCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcc-eEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHH
Confidence 644 3469986 568999999999999987421 111000 0000 01245688999
Q ss_pred -hhhCCcccCHHHHHHHHHH
Q 020608 296 -MDLGLQFIPMDQIIKDSVE 314 (323)
Q Consensus 296 -~~lG~~~~~~~~~l~~~~~ 314 (323)
+.|| .+++++++|+++++
T Consensus 268 ~~~lG-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 268 QKLIG-SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHS-SCCCHHHHHHHHHT
T ss_pred HHHhC-CCCCHHHHHHHHhc
Confidence 7799 44999999999875
No 69
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=100.00 E-value=9.9e-35 Score=240.16 Aligned_cols=208 Identities=18% Similarity=0.212 Sum_probs=167.7
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCC-HhHHHHHhcCCCEEEEc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLD-YDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~Vih~ 84 (323)
|+|||||||||||++++++|+++|++|++++|++.+... ..+++++.+|++| .+++.++++++|+|||+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 489999999999999999999999999999997532211 1478999999999 99999999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+... ...+++|+.++.++++++++.++++||++||.+++.+ .+..| .+. .+.+.|+.
T Consensus 71 ag~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~e-~~~------~~~~~Y~~ 128 (219)
T 3dqp_A 71 SGSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP-------EKWIG-AGF------DALKDYYI 128 (219)
T ss_dssp CCCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG-------GGCCS-HHH------HHTHHHHH
T ss_pred CcCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC-------Ccccc-ccc------ccccHHHH
Confidence 98742 2378899999999999999999999999999854432 23333 111 22367999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 165 SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
+|..+|.+++ +..+++++++||+.+||+....... .++...+++|++|+|++++.+++++.
T Consensus 129 sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------------~~~~~~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 129 AKHFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------------INDEVSASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp HHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------------ESSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred HHHHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------------cCCCcCCcccHHHHHHHHHHHHhCcc
Confidence 9999999986 4679999999999999986432111 23566779999999999999999876
Q ss_pred CCc-cEEEEcCccCHHHHHHH
Q 020608 245 ACG-RHLCVEAISHYGDFVAK 264 (323)
Q Consensus 245 ~~~-~~~~~~~~~~~~e~~~~ 264 (323)
..+ .||++++..+++|+...
T Consensus 190 ~~g~~~~i~~g~~~~~e~~~~ 210 (219)
T 3dqp_A 190 SIGKVISMHNGKTAIKEALES 210 (219)
T ss_dssp GTTEEEEEEECSEEHHHHHHT
T ss_pred ccCcEEEeCCCCccHHHHHHH
Confidence 544 59987667999988753
No 70
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=100.00 E-value=2.8e-34 Score=240.15 Aligned_cols=215 Identities=19% Similarity=0.234 Sum_probs=167.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCe-EEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRL-RLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++|+|||||||||||++++++|+++|++|++++|++++... +.. .++ +++.+|++ +++.+++.++|+|
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~---~~~-----~~~~~~~~~Dl~--~~~~~~~~~~D~v 88 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE---LRE-----RGASDIVVANLE--EDFSHAFASIDAV 88 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---HHH-----TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH---HHh-----CCCceEEEcccH--HHHHHHHcCCCEE
Confidence 578999999999999999999999999999999998644322 111 267 89999999 6788888999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
||+|+... ..++...+++|+.++.++++++++.++++||++||.++..+ +..+ . +.+.
T Consensus 89 i~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-----------~~~~-~------~~~~ 146 (236)
T 3e8x_A 89 VFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-----------DQGP-M------NMRH 146 (236)
T ss_dssp EECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-----------GGSC-G------GGHH
T ss_pred EECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-----------CCCh-h------hhhh
Confidence 99999742 35678899999999999999999988999999999633221 1111 1 1256
Q ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhc
Q 020608 162 YPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYE 241 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~ 241 (323)
|+.+|.++|.+++ +.+++++++||+.++|+........ ...+.+..+++|++|+|++++.+++
T Consensus 147 Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~ 209 (236)
T 3e8x_A 147 YLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAELVD 209 (236)
T ss_dssp HHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHHHhc
Confidence 9999999999875 6799999999999999864321100 0122335679999999999999999
Q ss_pred CCCCCc-cEEEEcCccCHHHHHHHHH
Q 020608 242 NPSACG-RHLCVEAISHYGDFVAKVA 266 (323)
Q Consensus 242 ~~~~~~-~~~~~~~~~~~~e~~~~i~ 266 (323)
++...| .|+++++.+++.|+++.++
T Consensus 210 ~~~~~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 210 QQHTIGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp CGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred CccccCCeEEEeCCCcCHHHHHHHhc
Confidence 875444 5888666799999998765
No 71
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=100.00 E-value=1.5e-34 Score=248.69 Aligned_cols=255 Identities=18% Similarity=0.174 Sum_probs=184.7
Q ss_pred eEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 7 VVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
+|||||||||||++++++|+++ |++|++++|++++... +.. .+++++.+|++|.+++.++++++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---LAA-----QGITVRQADYGDEAALTSALQGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---HHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---hhc-----CCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 5899999999999999999998 9999999998654322 111 26788999999999999999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+.. ...|+.++.+++++|++.++++||++||.+++ ..+ ..|+.
T Consensus 73 a~~~------------~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~-----------------------~~y~~ 116 (286)
T 2zcu_A 73 SSSE------------VGQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-TSP-----------------------LGLAD 116 (286)
T ss_dssp C--------------------CHHHHHHHHHHHHTCCEEEEEEETTTT-TCC-----------------------STTHH
T ss_pred CCCC------------chHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CCc-----------------------chhHH
Confidence 9852 02478899999999999899999999998543 110 34999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHH-cCCCC-CccCcCCCcccHHHHHHHHHHhhcC
Q 020608 165 SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL-QGCTD-TYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
+|..+|.+++ +++++++++||+.++++... .+.... .+... ..+++.++++|++|+|++++.++++
T Consensus 117 sK~~~e~~~~----~~~~~~~ilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 184 (286)
T 2zcu_A 117 EHIETEKMLA----DSGIVYTLLRNGWYSENYLA--------SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISE 184 (286)
T ss_dssp HHHHHHHHHH----HHCSEEEEEEECCBHHHHHT--------THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHH----HcCCCeEEEeChHHhhhhHH--------HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcC
Confidence 9999999885 35899999999877665321 112222 23221 1345667899999999999999987
Q ss_pred CCC-CccEEEE-cCccCHHHHHHHHHHHCCCCC----CCCCCCC------CCCC--------------CccccccchhH-
Q 020608 243 PSA-CGRHLCV-EAISHYGDFVAKVAELYPEYD----IPRLPKD------TQPG--------------LLRTKDGAKKL- 295 (323)
Q Consensus 243 ~~~-~~~~~~~-~~~~~~~e~~~~i~~~~~~~~----~~~~~~~------~~~~--------------~~~~~~~~~~~- 295 (323)
+.. ++.||++ ++.+|+.|+++.+.+.+|... +|..... ..+. ......|++++
T Consensus 185 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (286)
T 2zcu_A 185 AGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLS 264 (286)
T ss_dssp SSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHH
T ss_pred CCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHH
Confidence 544 4469986 458999999999999986421 1111000 0000 01245688899
Q ss_pred hhhCCcccCHHHHHHHHHHHHH
Q 020608 296 MDLGLQFIPMDQIIKDSVESLK 317 (323)
Q Consensus 296 ~~lG~~~~~~~~~l~~~~~~~~ 317 (323)
+.|||.+++++++|+++++|+.
T Consensus 265 ~~lg~~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 265 KLIGHPTTTLAESVSHLFNVNN 286 (286)
T ss_dssp HHHTSCCCCHHHHHHGGGC---
T ss_pred HHhCcCCCCHHHHHHHHHhhcC
Confidence 7799866999999999998863
No 72
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=100.00 E-value=2.7e-33 Score=249.56 Aligned_cols=210 Identities=16% Similarity=0.128 Sum_probs=175.5
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
|+|||||||||||++|+++|+++|+ +|++++|+ +|.+++.++++++|+|||+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~ 53 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL 53 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence 5899999999999999999999998 88766442 6788899999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
|+.... .++...+++|+.++.+++++|++.+++ +|||+||.+++. . +.|+
T Consensus 54 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-~------------------------~~Y~ 104 (369)
T 3st7_A 54 AGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-D------------------------NPYG 104 (369)
T ss_dssp CCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-C------------------------SHHH
T ss_pred CcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-C------------------------CCch
Confidence 997532 456678899999999999999999887 999999995543 1 4599
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCC-chhHHHHHHHHcCCCCCc--cCcCCCcccHHHHHHHHHHhh
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTL-NASMLMLLRLLQGCTDTY--ENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~~i~v~D~a~~~~~~~ 240 (323)
.+|.++|.+++.++++.+++++++||+++|||+..... .....++..+..+.+... ++..++++|++|+|++++.++
T Consensus 105 ~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 184 (369)
T 3st7_A 105 ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAI 184 (369)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHH
Confidence 99999999999999888999999999999999876543 234455666777776653 455667999999999999999
Q ss_pred cCCCC--CccEEEE-cCccCHHHHHHHHHHHCCC
Q 020608 241 ENPSA--CGRHLCV-EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 241 ~~~~~--~~~~~~~-~~~~~~~e~~~~i~~~~~~ 271 (323)
+++.. ++.||++ ++.+|+.|+++.+.+.+|.
T Consensus 185 ~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~ 218 (369)
T 3st7_A 185 EGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS 218 (369)
T ss_dssp HTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred hCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence 98776 5678875 6789999999999998854
No 73
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=100.00 E-value=7.2e-32 Score=223.67 Aligned_cols=213 Identities=13% Similarity=0.029 Sum_probs=160.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|+|||||||||||++|+++|+++|++|+++.|++.+. ..+ . ..+++++.+|++|.++ +.+.++|+|||+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~---~--~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA---ADR---L--GATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHH---T--CTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc---ccc---c--CCCceEEecccccccH--hhcccCCEEEECC
Confidence 4799999999999999999999999999999974221 111 1 2478999999999887 7789999999999
Q ss_pred cCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHH
Q 020608 86 SPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLS 165 (323)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s 165 (323)
+.... ....++|+.++.++++++++.+ +++|++||.++++...... ..+.+|+.... +.+.|+.+
T Consensus 71 g~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~~~~------~~~~y~~s 135 (224)
T 3h2s_A 71 SVPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFPESAA------SQPWYDGA 135 (224)
T ss_dssp CCCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCCGGGG------GSTTHHHH
T ss_pred ccCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCCCCCc------cchhhHHH
Confidence 87411 1235789999999999999999 9999999997777654311 12444443332 23679999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCC
Q 020608 166 KTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 166 K~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
|..+|.+ ..+.++.+++++++||+.+|||+.... .. ........+....+++|++|+|++++.+++++..
T Consensus 136 K~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~--------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~ 205 (224)
T 3h2s_A 136 LYQYYEY-QFLQMNANVNWIGISPSEAFPSGPATS-YV--------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTA 205 (224)
T ss_dssp HHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC-EE--------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHH-HHHHhcCCCcEEEEcCccccCCCcccC-ce--------ecccccccCCCCCceEeHHHHHHHHHHHhcCccc
Confidence 9999954 445556799999999999999954322 10 1112222345556799999999999999998876
Q ss_pred Ccc-EEEEc
Q 020608 246 CGR-HLCVE 253 (323)
Q Consensus 246 ~~~-~~~~~ 253 (323)
.++ |++++
T Consensus 206 ~g~~~~~~~ 214 (224)
T 3h2s_A 206 IRDRIVVRD 214 (224)
T ss_dssp TTSEEEEEE
T ss_pred cCCEEEEec
Confidence 554 88754
No 74
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=100.00 E-value=3.2e-32 Score=225.28 Aligned_cols=214 Identities=14% Similarity=0.151 Sum_probs=143.9
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|+|||||||||||++|+++|+++|++|++++|++++.. . +. .+++++.+|++|.++ +.+.++|+|||+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~---~~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT---Q---TH---KDINILQKDIFDLTL--SDLSDQNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH---H---HC---SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh---h---cc---CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence 57999999999999999999999999999999753221 1 11 378999999999887 7789999999999
Q ss_pred cCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHH
Q 020608 86 SPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLS 165 (323)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~s 165 (323)
+... ...+.|+.++.++++++++.+++++|++||.+++++... ..+..|+.+..+. +.|+.+
T Consensus 70 g~~~---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~~~~~~~~------~~y~~~ 131 (221)
T 3ew7_A 70 GISP---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED---GNTLLESKGLREA------PYYPTA 131 (221)
T ss_dssp CSST---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------C------CCSCCH
T ss_pred cCCc---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC---CccccccCCCCCH------HHHHHH
Confidence 8731 135679999999999999998899999999988876653 2345555544433 679999
Q ss_pred HHHHHHHHHHHHH-hCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 166 KTLAEKAAWEFAK-EKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 166 K~~~e~~~~~~~~-~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
|..+|.+. .+.. ..+++++++||+.+|||+..... + . ..+...........++|++|+|++++.+++++.
T Consensus 132 k~~~e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~~~~-----~--~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~ 202 (221)
T 3ew7_A 132 RAQAKQLE-HLKSHQAEFSWTYISPSAMFEPGERTGD-----Y--Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN 202 (221)
T ss_dssp HHHHHHHH-HHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHH-HHHhhccCccEEEEeCcceecCCCccCc-----e--E-eccccceecCCCCceEeHHHHHHHHHHHHhCcc
Confidence 99999873 3333 67999999999999998432111 0 0 111222222222469999999999999999887
Q ss_pred CCcc-EEEEc-CccC
Q 020608 245 ACGR-HLCVE-AISH 257 (323)
Q Consensus 245 ~~~~-~~~~~-~~~~ 257 (323)
..++ ||+++ ...+
T Consensus 203 ~~g~~~~~~~~~~~~ 217 (221)
T 3ew7_A 203 HLNEHFTVAGKLEHH 217 (221)
T ss_dssp CTTSEEECCC-----
T ss_pred ccCCEEEECCCCccc
Confidence 6554 88753 4443
No 75
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=100.00 E-value=2.2e-32 Score=230.86 Aligned_cols=231 Identities=22% Similarity=0.171 Sum_probs=171.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
++||+|||||||||||++++++|+++ |++|+++.|++.+ .. .+ ..+++++.+|++|.+++.++++++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~---~~---~~---~~~~~~~~~D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---KE---KI---GGEADVFIGDITDADSINPAFQGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH---HH---HT---TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc---hh---hc---CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence 56899999999999999999999999 8999999996422 11 11 23677899999999999999999999
Q ss_pred EEEcccCCccCC-------------CCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 81 VFHLASPCIVDK-------------VEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 81 Vih~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
|||+|+...... ..+.+...+++|+.++.++++++++.++++||++||.+++....
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~----------- 141 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH----------- 141 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC-----------
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC-----------
Confidence 999999753210 11222356799999999999999988889999999985432110
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcc
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSV 227 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 227 (323)
+..+ +. .+.|+.+|..+|.+++ +.+++++++||+.+|||...... +..+...........++
T Consensus 142 -~~~~-~~---~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 203 (253)
T 1xq6_A 142 -PLNK-LG---NGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRE---------LLVGKDDELLQTDTKTV 203 (253)
T ss_dssp -GGGG-GG---GCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSC---------EEEESTTGGGGSSCCEE
T ss_pred -cccc-cc---chhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchhh---------hhccCCcCCcCCCCcEE
Confidence 1100 11 1348889999998874 47999999999999998643211 01111111111234599
Q ss_pred cHHHHHHHHHHhhcCCCCC-ccEEEEc----CccCHHHHHHHHHHHCCC
Q 020608 228 HFKDVALAHILVYENPSAC-GRHLCVE----AISHYGDFVAKVAELYPE 271 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~~-~~~~~~~----~~~~~~e~~~~i~~~~~~ 271 (323)
|++|+|++++.+++++... ..||+++ +.+++.|+++.+.+.+|.
T Consensus 204 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 204 PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp EHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999876543 4588754 358999999999998764
No 76
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=100.00 E-value=1.5e-32 Score=242.66 Aligned_cols=274 Identities=12% Similarity=0.076 Sum_probs=187.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc-HHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD-ERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCT 79 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d 79 (323)
|++|+|||||||||||++|+++|+++|++|+++.|+++. ......+..+. ..+++++.+|++|.+++.++++ ++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 345799999999999999999999999999999998632 23333332322 2478999999999999999999 999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
+|||+|+. .|+.++.+++++|++.+ +++||+ |+. +...+|+.+..|.
T Consensus 86 ~Vi~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~-----------g~~~~e~~~~~p~----- 133 (346)
T 3i6i_A 86 IVVSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-SEF-----------GHDVNRADPVEPG----- 133 (346)
T ss_dssp EEEECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-SCC-----------SSCTTTCCCCTTH-----
T ss_pred EEEECCch---------------hhHHHHHHHHHHHHHcCCceEEee-ccc-----------CCCCCccCcCCCc-----
Confidence 99999986 16778999999999998 999986 432 1123444444443
Q ss_pred CCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVALA 235 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a~~ 235 (323)
+.|+.+|..+|.+++ +.|++++++||+.++|........ .......+.... . ++..++|+|++|+|++
T Consensus 134 -~~y~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~----~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~ 204 (346)
T 3i6i_A 134 -LNMYREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIH----PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKF 204 (346)
T ss_dssp -HHHHHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHH
T ss_pred -chHHHHHHHHHHHHH----HcCCCEEEEEecccccccCccccc----cccccCCCceEEEccCCCceEEecCHHHHHHH
Confidence 569999999999885 468999999999999975432111 011111222222 3 3445679999999999
Q ss_pred HHHhhcCCCC-CccEEEE--cCccCHHHHHHHHHHHCCCCCCCCC--CCC-------CCCCCcc---------------c
Q 020608 236 HILVYENPSA-CGRHLCV--EAISHYGDFVAKVAELYPEYDIPRL--PKD-------TQPGLLR---------------T 288 (323)
Q Consensus 236 ~~~~~~~~~~-~~~~~~~--~~~~~~~e~~~~i~~~~~~~~~~~~--~~~-------~~~~~~~---------------~ 288 (323)
++.++.++.. ++.|++. ++.+|+.|+++.+.+.+|.. ++.. ... ....+.. .
T Consensus 205 ~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 283 (346)
T 3i6i_A 205 TMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRT-LPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQV 283 (346)
T ss_dssp HHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSC-CCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCC-CceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCc
Confidence 9999998765 4457764 57899999999999998642 1110 000 0000000 0
Q ss_pred cccc-----hhHhhh--CCcccCHHHHHHHHHHHHHHcC
Q 020608 289 KDGA-----KKLMDL--GLQFIPMDQIIKDSVESLKAKG 320 (323)
Q Consensus 289 ~~~~-----~~~~~l--G~~~~~~~~~l~~~~~~~~~~~ 320 (323)
.++. .+++++ +++++++++.|+++++|+.++.
T Consensus 284 ~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~~~~ 322 (346)
T 3i6i_A 284 NFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEKQ 322 (346)
T ss_dssp SSCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHCC-----
T ss_pred ccccCCCCcccHHHhCCCCCcCcHHHHHHHHHHHhhccc
Confidence 1222 223332 6777999999999999988763
No 77
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.98 E-value=1e-31 Score=230.47 Aligned_cols=243 Identities=19% Similarity=0.117 Sum_probs=170.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+...... ..... ..+++++.+|++|.++++++++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD--LVAAY---PDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH--HHHHC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHhc---cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999997543322 22222 3478999999999999888776
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHH----HhhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTA----AKALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||..... .+.+++...+++|+.++.+++++ +++.+.++||++||.+++.+...
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------- 147 (281)
T 3m1a_A 76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG-------- 147 (281)
T ss_dssp HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC--------
Confidence 789999999976432 23456778999999995555554 45666789999999976654331
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCch----hHHHHHHHHcCCCCC
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNA----SMLMLLRLLQGCTDT 218 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~----~~~~~~~~~~g~~~~ 218 (323)
.+.|+.||.+.|.+++.++.+ +|++++++|||.+++|........ ...+...........
T Consensus 148 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (281)
T 3m1a_A 148 -------------FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV 214 (281)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH
Confidence 145999999999999999887 699999999999998864321100 000111111100000
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCCCCccEEEE-cCccCHHHHHHHHHHHC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPSACGRHLCV-EAISHYGDFVAKVAELY 269 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~~~ 269 (323)
.......+++++|+|++++.+++.+..++.|+++ +....+.+.+..+.+.+
T Consensus 215 ~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 215 QGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL 266 (281)
T ss_dssp HC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence 1112234788999999999999988777778875 44445566665555443
No 78
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.97 E-value=2.2e-32 Score=225.28 Aligned_cols=207 Identities=17% Similarity=0.142 Sum_probs=158.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|++++|+|||||||||||++++++|+++|+ +|++++|++.+ ...+++++.+|++|.+++.+++ +
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~ 66 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--I 66 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--C
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--h
Confidence 666678999999999999999999999998 99999998654 0246888899999988888777 9
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+|||+|+.... ...++...+++|+.++.++++++++.++++||++||.+++. .+
T Consensus 67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-~~---------------------- 121 (215)
T 2a35_A 67 DTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-KS---------------------- 121 (215)
T ss_dssp SEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TC----------------------
T ss_pred cEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-CC----------------------
Confidence 999999987432 23457788999999999999999999999999999985432 11
Q ss_pred CCchHHHHHHHHHHHHHHHHhCCcc-EEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKEKGLD-VVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHI 237 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~-~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~ 237 (323)
.+.|+.+|..+|.+++ ..+++ ++++||+.+|||...... ...+. +.....+++.++++|++|+|++++
T Consensus 122 ~~~y~~sK~~~e~~~~----~~~~~~~~~vrp~~v~g~~~~~~~------~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~ 190 (215)
T 2a35_A 122 SIFYNRVKGELEQALQ----EQGWPQLTIARPSLLFGPREEFRL------AEILA-APIARILPGKYHGIEACDLARALW 190 (215)
T ss_dssp SSHHHHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEG------GGGTT-CCCC----CHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH----HcCCCeEEEEeCceeeCCCCcchH------HHHHH-HhhhhccCCCcCcEeHHHHHHHHH
Confidence 1459999999999885 45899 999999999999754211 11111 221222333556999999999999
Q ss_pred HhhcCCCCCccEEEE-cCccCH
Q 020608 238 LVYENPSACGRHLCV-EAISHY 258 (323)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~~~~ 258 (323)
.+++++. ++.||++ ++.+++
T Consensus 191 ~~~~~~~-~~~~~i~~~~~~~~ 211 (215)
T 2a35_A 191 RLALEEG-KGVRFVESDELRKL 211 (215)
T ss_dssp HHHTCCC-SEEEEEEHHHHHHH
T ss_pred HHHhcCC-CCceEEcHHHHHHh
Confidence 9999875 6779986 444443
No 79
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.4e-31 Score=230.60 Aligned_cols=252 Identities=16% Similarity=0.180 Sum_probs=180.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
|+|||||||||||++++++|+++ |++|+++.|++++... +. ..+++++.+|++|++++.++++++|+|||+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~------~~--~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD------DW--RGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG------GG--BTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH------hh--hCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 57999999999999999999998 9999999997643211 11 247899999999999999999999999999
Q ss_pred ccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHH
Q 020608 85 ASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPL 164 (323)
Q Consensus 85 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~ 164 (323)
|+.... ...|+.++.+++++|++.++++||++||.+.... ++|..
T Consensus 73 a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~-------------------------~~~~~ 117 (289)
T 3e48_A 73 PSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHN-------------------------NPFHM 117 (289)
T ss_dssp CCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTT-------------------------CCSTT
T ss_pred CCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCC-------------------------CCCcc
Confidence 986321 2358999999999999999999999999632110 11222
Q ss_pred HH--HHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC--CccCcCCCcccHHHHHHHHHHhh
Q 020608 165 SK--TLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD--TYENFFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 165 sK--~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~i~v~D~a~~~~~~~ 240 (323)
++ ..+|..+ ++.|++++++||+.++|+.. ..+.....+... ..+++.++|+|++|+|++++.++
T Consensus 118 ~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 185 (289)
T 3e48_A 118 SPYFGYASRLL----STSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAII 185 (289)
T ss_dssp HHHHHHHHHHH----HHHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHH
T ss_pred chhHHHHHHHH----HHcCCCEEEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHH
Confidence 22 3344333 35699999999999999732 122222222222 24566677999999999999999
Q ss_pred cCCCC-CccEEEEcCccCHHHHHHHHHHHCCCCCCCCCCCC---------CCCCC-------------ccccccchhH-h
Q 020608 241 ENPSA-CGRHLCVEAISHYGDFVAKVAELYPEYDIPRLPKD---------TQPGL-------------LRTKDGAKKL-M 296 (323)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~---------~~~~~-------------~~~~~~~~~~-~ 296 (323)
.++.. +..|+++++.+|+.|+++.+.+.+|.. +...... .+... .....+.+.+ +
T Consensus 186 ~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (289)
T 3e48_A 186 KNPDTWGKRYLLSGYSYDMKELAAILSEASGTE-IKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQ 264 (289)
T ss_dssp HCGGGTTCEEEECCEEEEHHHHHHHHHHHHTSC-CEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHH
T ss_pred cCCCcCCceEEeCCCcCCHHHHHHHHHHHHCCc-eeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHH
Confidence 88765 446888877899999999999998752 1111000 00000 0122355566 7
Q ss_pred hhCCcccCHHHHHHHHH
Q 020608 297 DLGLQFIPMDQIIKDSV 313 (323)
Q Consensus 297 ~lG~~~~~~~~~l~~~~ 313 (323)
.+|+.|+++++.+++..
T Consensus 265 ~~G~~p~~~~~~~~~~~ 281 (289)
T 3e48_A 265 LVNDQPQTLQSFLQENI 281 (289)
T ss_dssp HHSSCCCCHHHHHHC--
T ss_pred HhCCCCCCHHHHHHHHH
Confidence 78999999999887654
No 80
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.97 E-value=7.3e-31 Score=220.24 Aligned_cols=209 Identities=19% Similarity=0.131 Sum_probs=159.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|++|+|||||||||||++++++|+++|+ +|++++|+++...... ..+++++.+|++|.++++++++++|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 3568999999999999999999999999 9999999865422110 12578899999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
||||||..... ..+...+++|+.++.++++++++.++++||++||.+++. .. .+
T Consensus 88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-~~----------------------~~ 141 (242)
T 2bka_A 88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-SS----------------------NF 141 (242)
T ss_dssp EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TC----------------------SS
T ss_pred EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-CC----------------------cc
Confidence 99999874321 235678899999999999999998889999999985542 11 14
Q ss_pred chHHHHHHHHHHHHHHHHhCCc-cEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHh
Q 020608 161 WYPLSKTLAEKAAWEFAKEKGL-DVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILV 239 (323)
Q Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~-~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~ 239 (323)
.|+.+|..+|.+++ ..++ +++++|||.+|||..... .............+...+. ..++|++|+|++++.+
T Consensus 142 ~Y~~sK~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~~~ 213 (242)
T 2bka_A 142 LYLQVKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWAS--GHSVPVVTVVRAMLNN 213 (242)
T ss_dssp HHHHHHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGGG--GTEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----hcCCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCccccC--CcccCHHHHHHHHHHH
Confidence 59999999999875 4578 599999999999964321 1112222232222222222 3489999999999999
Q ss_pred hcCCCCCccEEEEc
Q 020608 240 YENPSACGRHLCVE 253 (323)
Q Consensus 240 ~~~~~~~~~~~~~~ 253 (323)
+.++...+.|++++
T Consensus 214 ~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 214 VVRPRDKQMELLEN 227 (242)
T ss_dssp HTSCCCSSEEEEEH
T ss_pred HhCccccCeeEeeH
Confidence 99887777777754
No 81
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.97 E-value=8.8e-30 Score=218.09 Aligned_cols=241 Identities=17% Similarity=0.134 Sum_probs=175.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|.+++|+||||||+|+||++++++|+++|++|++++|+..... .....+.. ..++.++.+|++|.++++++++
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ--KVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHH--HHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999988642221 22222322 2368999999999999888776
Q ss_pred ---CCCEEEEcccCCccC------CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ---GCTGVFHLASPCIVD------KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++.. .+.++||++||..++.+...
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------ 162 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG------ 162 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT------
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC------
Confidence 789999999975321 12356678999999999999998754 35679999999966543320
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
....|+.+|.+.|.+++.++.+ +|++++++|||.++||...............+....+
T Consensus 163 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---- 224 (278)
T 2bgk_A 163 --------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA---- 224 (278)
T ss_dssp --------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----
Confidence 0134999999999999998876 5899999999999999754322111122222222211
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEE-cCccCHHHHHHHHHHH
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCV-EAISHYGDFVAKVAEL 268 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~-~~~~~~~e~~~~i~~~ 268 (323)
.....+++++|+|++++.++.... ..|+ +++. +...++.|+++.+.+.
T Consensus 225 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 225 NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence 112347899999999999997532 3354 6775 5678999999887654
No 82
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.97 E-value=2.1e-30 Score=224.32 Aligned_cols=224 Identities=16% Similarity=0.128 Sum_probs=169.7
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+|+||||||||+||++++++|+++| ++|+++.|++++... ..+.. .+++++.+|++|++++.++++++|+|||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 78 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-KELRL-----QGAEVVQGDQDDQVIMELALNGAYATFI 78 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-HHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-HHHHH-----CCCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence 5899999999999999999999998 999999998755322 11111 3688999999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+.... ...+.|+.++.++++++++.++++||++||. .+++.. ++.+ ...|+
T Consensus 79 ~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~---------~~~~---------~~~y~ 131 (299)
T 2wm3_A 79 VTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKLT---------AGRL---------AAAHF 131 (299)
T ss_dssp CCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CHHHHT---------TTSC---------CCHHH
T ss_pred eCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccccC---------CCcc---------cCchh
Confidence 9975211 1245688999999999999999999997776 333221 1111 14599
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC----CCccCcCCCcccHHHHHHHHHHh
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT----DTYENFFMGSVHFKDVALAHILV 239 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~i~v~D~a~~~~~~ 239 (323)
.+|..+|.+++ ++|++++++||+.+||+........ ....|.. ...++...+|+|++|+|+++..+
T Consensus 132 ~sK~~~e~~~~----~~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 201 (299)
T 2wm3_A 132 DGKGEVEEYFR----DIGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL 201 (299)
T ss_dssp HHHHHHHHHHH----HHTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred hHHHHHHHHHH----HCCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence 99999999885 3589999999999999753211100 0112321 11355566799999999999999
Q ss_pred hcCCC--CCccEEEEcCccCHHHHHHHHHHHCCC
Q 020608 240 YENPS--ACGRHLCVEAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 240 ~~~~~--~~~~~~~~~~~~~~~e~~~~i~~~~~~ 271 (323)
+.++. .+..|+++++.+|+.|+++.+.+.+|.
T Consensus 202 l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~ 235 (299)
T 2wm3_A 202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK 235 (299)
T ss_dssp HHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred HcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence 98642 344588877889999999999999864
No 83
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.97 E-value=2.9e-30 Score=228.05 Aligned_cols=227 Identities=16% Similarity=0.131 Sum_probs=168.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEcc-CCCHhHHHHHhcCCC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQID-LLDYDAIAAAVTGCT 79 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d 79 (323)
|+|++|+|||||||||||++|+++|+++|++|+++.|++++... ..+.. ..+++++.+| ++|.+++.++++++|
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-EELQA----IPNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-HHHHT----STTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-HHHhh----cCCcEEEECCccCCHHHHHHHHhcCC
Confidence 66667899999999999999999999999999999998765421 22221 1368899999 999999999999999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEeccccc-ccCCCCCCCCccccCCCCCChhhhcc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISS-ITPSPKWPADKVKDEDCWTDEEYCRQ 157 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~ 157 (323)
+|||+++... .+.|..+ .+++++|++.+ +++|||+||.+. .++..
T Consensus 76 ~Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~--------------------- 122 (352)
T 1xgk_A 76 LAFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPW--------------------- 122 (352)
T ss_dssp EEEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSC---------------------
T ss_pred EEEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCC---------------------
Confidence 9999986421 1346766 99999999988 999999999852 22110
Q ss_pred CCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC---C-ccCcCCCcccH-HHH
Q 020608 158 NEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD---T-YENFFMGSVHF-KDV 232 (323)
Q Consensus 158 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~---~-~~~~~~~~i~v-~D~ 232 (323)
+.+.|+.+|..+|.+++ ..+++++++||+ +||+........... ......|... . .+++.++++|+ +|+
T Consensus 123 ~~~~y~~sK~~~E~~~~----~~gi~~~ivrpg-~~g~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dv 196 (352)
T 1xgk_A 123 PAVPMWAPKFTVENYVR----QLGLPSTFVYAG-IYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDV 196 (352)
T ss_dssp CCCTTTHHHHHHHHHHH----TSSSCEEEEEEC-EEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred CCccHHHHHHHHHHHHH----HcCCCEEEEecc-eecCCchhccccccc-ccccCCCceEEeeccCCCCceeeEecHHHH
Confidence 11459999999999985 358999999986 688865322110000 0001233321 1 25566779999 999
Q ss_pred HHHHHHhhcCCC---CCccEEEEcCccCHHHHHHHHHHHCCC
Q 020608 233 ALAHILVYENPS---ACGRHLCVEAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 233 a~~~~~~~~~~~---~~~~~~~~~~~~~~~e~~~~i~~~~~~ 271 (323)
|++++.+++++. .++.||++++.+|+.|+++.+.+.+|.
T Consensus 197 a~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~ 238 (352)
T 1xgk_A 197 GPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR 238 (352)
T ss_dssp HHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence 999999998642 355699988889999999999998864
No 84
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.97 E-value=2.1e-29 Score=212.97 Aligned_cols=226 Identities=12% Similarity=0.080 Sum_probs=166.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+...+.++.++.+|++|+++++++++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN--HVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 467799999999999999999999999999999999753222 2222332224578899999999999888876
Q ss_pred --CCCEEEEcccCCccC---CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVD---KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.++||++||.+++.+...
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 155 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN---------- 155 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC----------
Confidence 799999999975432 2344567889999999999999874 445689999999865543221
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.+|.+.|.+++.++.+. +++++++|||.+++|...... ..........+.+. .
T Consensus 156 -----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~------~ 216 (255)
T 1fmc_A 156 -----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTPI------R 216 (255)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCSS------C
T ss_pred -----------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHHHHHhcCCc------c
Confidence 1459999999999999988764 899999999999998533211 11223333333321 2
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCc-cEEEE-cCccCH
Q 020608 225 GSVHFKDVALAHILVYENPS--ACG-RHLCV-EAISHY 258 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~~~~ 258 (323)
.+++++|+|++++.++.... ..| .|+++ +..+|+
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred cCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 37799999999999997542 234 47885 444543
No 85
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.97 E-value=4.2e-29 Score=213.81 Aligned_cols=236 Identities=15% Similarity=0.139 Sum_probs=158.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhc---cCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKAL---EGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+ ...+.++.++.+|++|.++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE--ETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999743222 222222 2223468899999999999888876
Q ss_pred ----CCCEEEEcccCCccCC--------CCCchhhhhhHHHHHHHHHHHHHhhC----CcCEEEEeccccc-ccCCCCCC
Q 020608 77 ----GCTGVFHLASPCIVDK--------VEDPQNQLLNPAVKGTVNVLTAAKAL----GVKRVVVTSSISS-ITPSPKWP 139 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~-~~~~~~~~ 139 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... + ++||++||.++ +.+.+.
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-- 158 (278)
T 1spx_A 82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPD-- 158 (278)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTT--
T ss_pred HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCC--
Confidence 8999999999753321 34457788999999999999997543 5 79999999865 433221
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHH------HHHH
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASML------MLLR 210 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~------~~~~ 210 (323)
...|+.+|.+.+.+++.++.+ +|++++++|||.+++|........... ....
T Consensus 159 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 219 (278)
T 1spx_A 159 -------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT 219 (278)
T ss_dssp -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred -------------------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence 134999999999999988766 589999999999999864321100000 0122
Q ss_pred HHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC---CCcc-EEEE-cCccCHHHHHHHHHHH
Q 020608 211 LLQGCTDTYENFFMGSVHFKDVALAHILVYENPS---ACGR-HLCV-EAISHYGDFVAKVAEL 268 (323)
Q Consensus 211 ~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~-~~~~~~~e~~~~i~~~ 268 (323)
+.... +. ..+++++|+|++++.++..+. ..|+ +++. +...++.|+++.+.+.
T Consensus 220 ~~~~~----p~--~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 220 MKECV----PA--GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp HHHHC----TT--SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred HHhcC----CC--cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence 21111 11 237899999999999987532 3355 6675 5578999999988764
No 86
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.97 E-value=1.4e-28 Score=208.61 Aligned_cols=226 Identities=15% Similarity=0.112 Sum_probs=163.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+...+.++.++.+|++|.++++++++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMAT--KAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999743222 2222332224578999999999999888775
Q ss_pred --CCCEEEEcccCCc-cC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCI-VD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||... .. ...+.+...+++|+.++.++++++.. .+.+++|++||.+++.+.+..
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------- 160 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ------- 160 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC-------
Confidence 7899999999754 11 12344678899999999999998753 356799999998655433210
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
+...|+.+|.+.|.+++.++.+ +|++++++|||.+++|....... .......+..+.+.
T Consensus 161 ------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~----- 222 (260)
T 3awd_A 161 ------------QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-KPELYDAWIAGTPM----- 222 (260)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-CHHHHHHHHHTCTT-----
T ss_pred ------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-ChHHHHHHHhcCCc-----
Confidence 0144999999999999998877 69999999999999986431000 11223333333221
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcCc
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVEAI 255 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~~ 255 (323)
..+++++|+|++++.++.... ..|+ +++.++.
T Consensus 223 -~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 223 -GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 237899999999999987532 2444 6776543
No 87
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.96 E-value=1.2e-28 Score=201.37 Aligned_cols=202 Identities=17% Similarity=0.129 Sum_probs=150.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++|+|+|||||||||++++++|+++|++|+++.|++++.. .. ...+++++.+|++|.+++.++++++|+|||
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~------~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 73 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP------SE--GPRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC------SS--SCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc------cc--cCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3489999999999999999999999999999999753211 11 134789999999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchH
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYP 163 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~ 163 (323)
+|+.... .+ ..++|+.++.++++++++.++++||++||.+++.... ..+. + .+.|+
T Consensus 74 ~a~~~~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~----~~~~-------~------~~~y~ 129 (206)
T 1hdo_A 74 LLGTRND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT----KVPP-------R------LQAVT 129 (206)
T ss_dssp CCCCTTC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT----CSCG-------G------GHHHH
T ss_pred CccCCCC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcc----cccc-------c------chhHH
Confidence 9986432 11 2358999999999999998889999999995443221 1100 1 15599
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 164 LSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
.+|..+|.+++ +.+++++++||+.+ ++......... ...+. +. .+++|++|+|++++.+++++
T Consensus 130 ~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~~~------~~~~~----~~--~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 130 DDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLTGAYTV------TLDGR----GP--SRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHHHH----HTCSEEEEECCSEE-ECCCCCSCCEE------ESSSC----SS--CSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCCcceEe------cccCC----CC--CCccCHHHHHHHHHHHhcCc
Confidence 99999999884 57899999999998 33321111000 00111 11 47999999999999999987
Q ss_pred CCCc-cEEEEcC
Q 020608 244 SACG-RHLCVEA 254 (323)
Q Consensus 244 ~~~~-~~~~~~~ 254 (323)
...| .|+++++
T Consensus 193 ~~~g~~~~i~~g 204 (206)
T 1hdo_A 193 EYDGHSTYPSHQ 204 (206)
T ss_dssp TTTTCEEEEECC
T ss_pred cccccceeeecc
Confidence 6544 4887653
No 88
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.96 E-value=2.7e-29 Score=217.66 Aligned_cols=239 Identities=14% Similarity=0.097 Sum_probs=169.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.+... +..+.+... +.++.++.+|++|.++++++++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK--ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999753222 222222111 3478999999999998887765
Q ss_pred ---CCCEEEEcccCCcc----CCCCCchhhhhhHHHHHHHHHHHHHhh-----CCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIV----DKVEDPQNQLLNPAVKGTVNVLTAAKA-----LGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||.... ....+.+...+++|+.++.++++++.. .+.++||++||.+++.+...
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------- 173 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF------- 173 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-------
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC-------
Confidence 46999999996533 124456788999999999999888743 34579999999866654321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+ +|++++++|||.++++...............+..+.+
T Consensus 174 --------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p----- 234 (302)
T 1w6u_A 174 --------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP----- 234 (302)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT-----
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC-----
Confidence 134999999999999999877 6999999999999998432111111111122223221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEE-cCccCHHHHHHHHHHHC
Q 020608 222 FFMGSVHFKDVALAHILVYENPSA--CGR-HLCV-EAISHYGDFVAKVAELY 269 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~-~~~~~~~e~~~~i~~~~ 269 (323)
...+++++|+|++++.++..... .|+ +++. +..+++.++++.+.+..
T Consensus 235 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 235 -CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT 285 (302)
T ss_dssp -TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred -cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence 12377999999999999875332 344 7775 44567777777666554
No 89
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.1e-28 Score=206.09 Aligned_cols=211 Identities=19% Similarity=0.192 Sum_probs=161.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+++|+||||||+|+||++++++|+++|++|++++|+..... ..++.++.+|++|+++++++++
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999764321 2368899999999999888776
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.+++|++||..+..+....
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------- 165 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM-------- 165 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC--------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC--------
Confidence 799999999976432 244567889999999999999987 45666899999998554322211
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
+...|+.||.+.+.+++.++.++ |+++++++||.+++|..... .........+ .
T Consensus 166 -----------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~~p------~ 222 (260)
T 3un1_A 166 -----------PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE------THSTLAGLHP------V 222 (260)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG------GHHHHHTTST------T
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH------HHHHHhccCC------C
Confidence 11459999999999999999886 89999999999999975321 1112222211 1
Q ss_pred CCcccHHHHHHHHHHhhcCCCCCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPSACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.+.+.....|+ +++.++
T Consensus 223 ~r~~~~~dva~av~~L~~~~~itG~~i~vdGG 254 (260)
T 3un1_A 223 GRMGEIRDVVDAVLYLEHAGFITGEILHVDGG 254 (260)
T ss_dssp SSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence 2367899999999999665555565 666543
No 90
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.96 E-value=3.3e-28 Score=204.46 Aligned_cols=221 Identities=18% Similarity=0.165 Sum_probs=165.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|+++.|+.. ....+..+.+...+.++.++.+|++|.++++++++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999887542 22222233333335578999999999999888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+.+..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 151 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ--------- 151 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC---------
Confidence 7899999999764322 44567789999999999999998 44556799999999777655321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+.+.++.+ +|+++++++||.+++|...... ......+..+.+. .
T Consensus 152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~------~ 210 (246)
T 3osu_A 152 ------------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---DELKEQMLTQIPL------A 210 (246)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---HHHHHHHHTTCTT------C
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---HHHHHHHHhcCCC------C
Confidence 34999999999999988875 4899999999999998754322 2233333333321 2
Q ss_pred CcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++..... .|+ +++.++
T Consensus 211 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 211 RFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 367899999999999875432 354 666543
No 91
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.96 E-value=1.1e-28 Score=207.32 Aligned_cols=218 Identities=19% Similarity=0.148 Sum_probs=160.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---CC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---GC 78 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~ 78 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.++.. +..... .+.+++.+|++|.++++++++ ++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV--SLAKEC----PGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHhc----cCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 367789999999999999999999999999999998742221 111211 256778999999999999887 47
Q ss_pred CEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 79 TGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 79 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
|+|||+||..... ...+.+...+++|+.++.++++++... + .++||++||..++.+...
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 145 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------ 145 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC------------
Confidence 9999999975432 134567789999999999999987543 4 579999999866543321
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCc
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGS 226 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 226 (323)
...|+.+|.+.|.+++.++.+ .+++++++|||.++||....... ....+..+..+.+ ...+
T Consensus 146 ---------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~ 209 (244)
T 1cyd_A 146 ---------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHP------LRKF 209 (244)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHHHHHHHHST------TSSC
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc-CHHHHHHHHhcCC------ccCC
Confidence 134999999999999998877 58999999999999985321100 1122233333322 2458
Q ss_pred ccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 227 VHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 227 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
+|++|+|++++.+++.+. ..|+ +++.+
T Consensus 210 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 239 (244)
T 1cyd_A 210 AEVEDVVNSILFLLSDRSASTSGGGILVDA 239 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred CCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence 999999999999997543 2344 55544
No 92
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.96 E-value=9.3e-29 Score=211.93 Aligned_cols=240 Identities=20% Similarity=0.178 Sum_probs=173.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCC---CCeEEEEccCCCHhHHHHHhc--
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGAD---TRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+ .++.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLA--GAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999998753322 2233333222 378899999999998887765
Q ss_pred -----CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCc
Q 020608 77 -----GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 -----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++.. .+.++||++||.+++.+....
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 161 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF---- 161 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC----
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC----
Confidence 68999999997321 124456788999999999999998743 344599999999776554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.++ |+++++++||.+++|...... .............+
T Consensus 162 -----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p--- 220 (281)
T 3svt_A 162 -----------------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCTP--- 220 (281)
T ss_dssp -----------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHCS---
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcCC---
Confidence 449999999999999988775 699999999999998542100 00111222222221
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEE-cCccC-HHHHHHHHHHHCCC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPSA--CGR-HLCV-EAISH-YGDFVAKVAELYPE 271 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~-~~~~~-~~e~~~~i~~~~~~ 271 (323)
...+.+++|+|++++.++..... .|+ +++. +...+ ..++++.+.+.++.
T Consensus 221 ---~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~ 274 (281)
T 3svt_A 221 ---LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR 274 (281)
T ss_dssp ---SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred ---CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence 12366899999999999975432 355 6775 44444 66788888777754
No 93
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.96 E-value=2.2e-27 Score=202.24 Aligned_cols=219 Identities=16% Similarity=0.082 Sum_probs=165.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+....... ...+ +.++.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASV---GRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHH---CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHh---CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999987654332 2222 3478899999999999888776
Q ss_pred --CCCEEEEcccCCcc------CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 --GCTGVFHLASPCIV------DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 --~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+....
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------ 156 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS------ 156 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC------
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC------
Confidence 78999999997632 1244567889999999999999998 55666799999999766544321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.||.+.+.+++.++.+ +|+++++++||.+++|....... ......+....+.
T Consensus 157 ---------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~---- 215 (271)
T 3tzq_B 157 ---------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP--QPIVDIFATHHLA---- 215 (271)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C--HHHHHHHHTTSTT----
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC--HHHHHHHHhcCCC----
Confidence 34999999999999999887 68999999999999997542221 1222232222211
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 216 --~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 216 --GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 226789999999999997543 2455 556544
No 94
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.96 E-value=2.1e-28 Score=208.11 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=147.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh-----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV----- 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----- 75 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+.+... +....+...+.++.++.+|++|.+++++++
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN--ECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998743222 222223222457889999999999888776
Q ss_pred ---cCCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 76 ---TGCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 76 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
.++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------- 160 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV------- 160 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC-------
Confidence 4789999999975332 134567788999999999999998 4456789999999866554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+. |++++++|||.+++|...... ............ +
T Consensus 161 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~----~- 219 (266)
T 1xq1_A 161 --------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRK----P- 219 (266)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcC----C-
Confidence 1459999999999999988774 899999999999998653211 001111111111 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 220 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 254 (266)
T 1xq1_A 220 -LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254 (266)
T ss_dssp -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred -CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence 1237899999999999987532 2344 555443
No 95
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.96 E-value=5.2e-28 Score=207.18 Aligned_cols=230 Identities=19% Similarity=0.137 Sum_probs=164.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC----------cHHH-HHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS----------DERE-TAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+ +... .+..+.+...+.++.++.+|++|.+++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 56789999999999999999999999999999998421 2222 233333444456889999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCC-cCEEEEecccccccCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALG-VKRVVVTSSISSITPS 135 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~SS~~~~~~~ 135 (323)
+++++ ++|+||||||...... +.+.+...+++|+.++.++++++. +.+ .++||++||..++.+.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 88765 7899999999864322 455678899999999999999973 222 4689999999776554
Q ss_pred CCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHH
Q 020608 136 PKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL 212 (323)
Q Consensus 136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~ 212 (323)
... ..|+.+|.+.+.+++.++.+ +|+++++++||.+++|..... .....+....
T Consensus 173 ~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~ 229 (280)
T 3pgx_A 173 PGN---------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHP 229 (280)
T ss_dssp TTB---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCG
T ss_pred CCc---------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCc
Confidence 321 34999999999999999877 589999999999999875321 0111111100
Q ss_pred c--CCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcCc
Q 020608 213 Q--GCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEAI 255 (323)
Q Consensus 213 ~--g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~~ 255 (323)
. ......+.....+++++|+|++++.++.... ..|+ +++.++.
T Consensus 230 ~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 230 SFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp GGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0 0000111111248899999999999987543 3455 5565543
No 96
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.96 E-value=2.9e-28 Score=206.91 Aligned_cols=224 Identities=16% Similarity=0.165 Sum_probs=160.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc---
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.++.. +..+.+... +.++.++.+|++|.++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH--EAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3466789999999999999999999999999999999743222 222222211 3468899999999999888776
Q ss_pred ----CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ----GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.++||++||.+++.+...
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 153 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY------- 153 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC-------
Confidence 7899999999754321 344677899999999999999874 345679999999966554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCc--------hhHHHHHHHHc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLN--------ASMLMLLRLLQ 213 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~ 213 (323)
...|+.+|.+.+.+++.++.+ +|++++++|||.+++|....... ........+..
T Consensus 154 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (263)
T 3ai3_A 154 --------------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVAD 219 (263)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHH
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHh
Confidence 134999999999999998877 58999999999999985321000 00111111111
Q ss_pred C-CCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 214 G-CTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 214 g-~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
. . ....+++++|+|++++.++..+. ..|+ +++.+
T Consensus 220 ~~~------p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg 257 (263)
T 3ai3_A 220 EHA------PIKRFASPEELANFFVFLCSERATYSVGSAYFVDG 257 (263)
T ss_dssp HHC------TTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred cCC------CCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence 1 1 11247899999999999997543 2344 66654
No 97
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.96 E-value=9e-28 Score=205.58 Aligned_cols=231 Identities=15% Similarity=0.132 Sum_probs=159.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc---
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+... ......+.+... ..++.++.+|++|.++++++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD-EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHH-HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChH-HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999885322 222222333222 4578999999999999888776
Q ss_pred ----CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ----GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+....
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------ 173 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK------ 173 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc------
Confidence 7899999999764322 44567889999999999999997 34455799999999776554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC----C
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT----D 217 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~----~ 217 (323)
..|+.||.+.+.+++.++.++ |+++++++||.+++|............ ........ .
T Consensus 174 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (281)
T 3v2h_A 174 ---------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-RGITEEQVINEVM 237 (281)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-cCCCHHHHHHHHH
Confidence 349999999999999988774 899999999999998643221110000 00000000 0
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.....+++++|+|++++.++.... ..|+ +++.++
T Consensus 238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG 277 (281)
T 3v2h_A 238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG 277 (281)
T ss_dssp --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence 011122348899999999999997643 2455 556443
No 98
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.96 E-value=5.7e-28 Score=203.20 Aligned_cols=222 Identities=16% Similarity=0.072 Sum_probs=152.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEE-ecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-VKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
|++++|+||||||+|+||++++++|+++|++|+++ .|++.... +..+.+...+.++.++.+|++|.++++++++
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLD--ATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAM 78 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHH--HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHH--HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 78889999999999999999999999999999998 45543222 2222222224578999999999999888776
Q ss_pred ----CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ----GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++.. .+.++||++||.++.++.+.
T Consensus 79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 151 (247)
T 2hq1_A 79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG------- 151 (247)
T ss_dssp HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-------
Confidence 789999999975421 24566788999999999998888743 45679999999866665431
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+. ++++++++||.+.++...... .........+.+
T Consensus 152 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~----- 209 (247)
T 2hq1_A 152 --------------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---DKVKEMYLNNIP----- 209 (247)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHTTST-----
T ss_pred --------------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---hHHHHHHHhhCC-----
Confidence 1449999999999999988764 899999999999887432111 112222222221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|+++..++..+. ..|+ |+++++
T Consensus 210 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 244 (247)
T 2hq1_A 210 -LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244 (247)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence 1247899999999999887532 2344 777543
No 99
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.96 E-value=1.2e-27 Score=204.97 Aligned_cols=228 Identities=16% Similarity=0.158 Sum_probs=164.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc---------HHH-HHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD---------ERE-TAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
++++|++|||||+|+||++++++|+++|++|++++|++.. ... .+....+...+.++.++.+|++|.+++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 3678999999999999999999999999999999997431 222 222223333356789999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSP 136 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~ 136 (323)
+++++ ++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF 166 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence 88776 789999999976432 244567889999999999999996 334557999999997665443
Q ss_pred CCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCc----------h
Q 020608 137 KWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLN----------A 203 (323)
Q Consensus 137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~----------~ 203 (323)
.. ..|+.+|.+.+.+.+.++.+ +|+++++++||.|++|....... .
T Consensus 167 ~~---------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 225 (281)
T 3s55_A 167 AQ---------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP 225 (281)
T ss_dssp TC---------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred CC---------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence 21 34999999999999999887 48999999999999997542100 0
Q ss_pred hHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 204 SMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 204 ~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
........... .......+++++|+|++++.++..... .|+ +++.++
T Consensus 226 ~~~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 275 (281)
T 3s55_A 226 TLKDVESVFAS----LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275 (281)
T ss_dssp CHHHHHHHHHH----HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chhHHHHHHHh----hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 00000000000 011124478999999999999986432 355 666543
No 100
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.96 E-value=5.9e-28 Score=204.49 Aligned_cols=222 Identities=16% Similarity=0.118 Sum_probs=161.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.... .+....+ ..++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA--RQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999864322 2222233 3468899999999999888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... + .++||++||.+++.+....
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 152 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV-------- 152 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB--------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC--------
Confidence 7899999999754322 44667889999999999999987432 2 4699999999776654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC----c
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT----Y 219 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~----~ 219 (323)
..|+.+|.+.+.+++.++.++ |+++++++||.+++|.... ....+.......... .
T Consensus 153 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~ 215 (259)
T 4e6p_A 153 -------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKKRLV 215 (259)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHHHHH
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHHHHH
Confidence 349999999999999998774 8999999999999986321 111111111111000 0
Q ss_pred --cCcCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 220 --ENFFMGSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 220 --~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
......+.+++|+|++++.++..... .|+ +++.++
T Consensus 216 ~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG 255 (259)
T 4e6p_A 216 GEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG 255 (259)
T ss_dssp HHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred hccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence 11223488999999999999874332 344 777543
No 101
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.96 E-value=4.3e-28 Score=207.09 Aligned_cols=224 Identities=18% Similarity=0.138 Sum_probs=161.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|.+++|+||||||+|+||++++++|+++|++|++++|+. .....+....+...+.++.++.+|++|.++++++++
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS-SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc-hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999842 111112222333234578899999999999888876
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccc-cCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSI-TPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~-~~~~~~~~~~~~~ 145 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++... + ++||++||.+++ .+...
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~-------- 166 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN-------- 166 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS--------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC--------
Confidence 789999999975331 234456789999999999999988654 4 699999998665 32211
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCC-----------CCchhHHHHHHH
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPP-----------TLNASMLMLLRL 211 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~-----------~~~~~~~~~~~~ 211 (323)
...|+.+|.+.|.+++.++.+. +++++++|||.++++.... ... ........
T Consensus 167 -------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (274)
T 1ja9_A 167 -------------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGL 232 (274)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHH
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHH
Confidence 1349999999999999988774 8999999999999874220 000 01112222
Q ss_pred HcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCC--Cc-cEEEEcC
Q 020608 212 LQGCTDTYENFFMGSVHFKDVALAHILVYENPSA--CG-RHLCVEA 254 (323)
Q Consensus 212 ~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~ 254 (323)
..+. ....+++++|+|++++.++..+.. .| .|+++++
T Consensus 233 ~~~~------~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 233 ANMN------PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HHTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhcC------CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 2222 123488999999999999975432 34 4777654
No 102
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.96 E-value=9e-28 Score=203.16 Aligned_cols=219 Identities=20% Similarity=0.148 Sum_probs=156.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+...... ....+ +.++.++.+|++|.++++++++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE--PAAEL---GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998754332 11122 3468899999999999888776
Q ss_pred ---CCCEEEEcccCCccC--------CCCCchhhhhhHHHHHHHHHHHHHhhC----------CcCEEEEecccccccCC
Q 020608 77 ---GCTGVFHLASPCIVD--------KVEDPQNQLLNPAVKGTVNVLTAAKAL----------GVKRVVVTSSISSITPS 135 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~ 135 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++... +.++||++||.+++.+.
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ 157 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence 789999999976331 234567889999999999999998542 34689999999777655
Q ss_pred CCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHH
Q 020608 136 PKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL 212 (323)
Q Consensus 136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~ 212 (323)
... ..|+.||.+.+.+++.++.+ +|+++++++||.+.+|...... ......+.
T Consensus 158 ~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~ 213 (257)
T 3tpc_A 158 IGQ---------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---QDVQDALA 213 (257)
T ss_dssp TTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------
T ss_pred CCC---------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---HHHHHHHH
Confidence 321 34999999999999988877 6899999999999998643211 01111111
Q ss_pred cCCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 213 QGCTDTYENFFMGSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 213 ~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
... +. ...+.+++|+|.++..+++.....|+ +++.+
T Consensus 214 ~~~----p~-~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tpc_A 214 ASV----PF-PPRLGRAEEYAALVKHICENTMLNGEVIRLDG 250 (257)
T ss_dssp CCS----SS-SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred hcC----CC-CCCCCCHHHHHHHHHHHcccCCcCCcEEEECC
Confidence 111 11 02377999999999999987655666 45543
No 103
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.96 E-value=1.5e-27 Score=201.07 Aligned_cols=221 Identities=18% Similarity=0.125 Sum_probs=160.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhc-cCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKAL-EGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
++|++|||||+|+||++++++|+++|++|++++|+.++.. +....+ ...+.++.++.+|++|.++++++++
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLE--ETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999998743222 222222 2223468999999999999888776
Q ss_pred -CCCEEEEcccCCccCC-------CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 -GCTGVFHLASPCIVDK-------VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.+++|++||.+++.+...
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------- 151 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG------- 151 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-------
Confidence 7899999999753221 334577899999999988777763 345689999999966654321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+. |++++++|||.+++|....... .......+..+.+
T Consensus 152 --------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~----- 211 (250)
T 2cfc_A 152 --------------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD-QPELRDQVLARIP----- 211 (250)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTCT-----
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC-CHHHHHHHHhcCC-----
Confidence 1449999999999999988765 9999999999999986432000 1112223333221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++..+.. .|+ +++.++
T Consensus 212 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 246 (250)
T 2cfc_A 212 -QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA 246 (250)
T ss_dssp -TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence 12377999999999999976432 355 556543
No 104
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.96 E-value=1.5e-27 Score=200.60 Aligned_cols=221 Identities=17% Similarity=0.117 Sum_probs=165.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..... +....+...+.++.++.+|++|.++++++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE--KFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999753322 2223333334578999999999999888765
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+.+++|++||..++.+.+..
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 151 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ------- 151 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc-------
Confidence 579999999976432 24556788999999999999998743 345699999999776654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++....... ........+.+
T Consensus 152 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~------ 208 (247)
T 3lyl_A 152 --------------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---EQKSFIATKIP------ 208 (247)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---HHHHHHHTTST------
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---HHHHHHhhcCC------
Confidence 34999999999999988876 48999999999999987543221 11222222211
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 209 ~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 242 (247)
T 3lyl_A 209 SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG 242 (247)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence 1337799999999999987543 2455 56654
No 105
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.96 E-value=1.3e-27 Score=202.63 Aligned_cols=221 Identities=19% Similarity=0.157 Sum_probs=163.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCC-CCeEEEEccCCCHhHHHHHhc---
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGAD-TRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.++. .+..+.+...+ .++.++.+|++|.++++++++
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI--DACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999975332 22233333323 578999999999999888765
Q ss_pred ----CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC----CcCEEEEecccccc-cCCCCCCCCcc
Q 020608 77 ----GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL----GVKRVVVTSSISSI-TPSPKWPADKV 143 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~-~~~~~~~~~~~ 143 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... +.+++|++||..+. .+.+.
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------ 157 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG------ 157 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC------
Confidence 7899999999764322 44567788999999999999987543 56799999998553 33221
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
...|+.||.+.+.+++.++.+ +|+++++++||.+++|...... ......+....+.
T Consensus 158 ---------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~--- 216 (262)
T 3pk0_A 158 ---------------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG---EEYIASMARSIPA--- 216 (262)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC---HHHHHHHHTTSTT---
T ss_pred ---------------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC---HHHHHHHHhcCCC---
Confidence 144999999999999999887 5899999999999998533211 1223333332211
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+.+++|+|+++..++.... ..|+ +++.+
T Consensus 217 ---~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG 249 (262)
T 3pk0_A 217 ---GALGTPEDIGHLAAFLATKEAGYITGQAIAVDG 249 (262)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 226789999999999987543 3455 55654
No 106
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.96 E-value=2.6e-27 Score=200.22 Aligned_cols=223 Identities=16% Similarity=0.103 Sum_probs=161.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.|++|++|||||+|+||++++++|+++|++|++++|+.+. ..+....+...+.++.++.+|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK--LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999987532 223333444445688999999999999888765
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH-----hhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA-----KALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.+++|++||..++.+....
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 153 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV------- 153 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC-------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc-------
Confidence 789999999965331 245567889999999999999997 33445799999999766544321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh----CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE----KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.||.+.+.+.+.++.+ +|+++++++||.+.+|.................... +
T Consensus 154 --------------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p- 214 (257)
T 3imf_A 154 --------------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV----P- 214 (257)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS----T-
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC----C-
Confidence 34999999999998888754 489999999999999864322110000111111111 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 215 -~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 248 (257)
T 3imf_A 215 -LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG 248 (257)
T ss_dssp -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 1237799999999999997543 2455 55644
No 107
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.96 E-value=1.5e-27 Score=204.16 Aligned_cols=233 Identities=18% Similarity=0.122 Sum_probs=166.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC----------cHHHHHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS----------DERETAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.. .....+....+...+.++.++.+|++|.+++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 357899999999999999999999999999999998732 2222222222333345899999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWP 139 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~ 139 (323)
+++++ ++|+||||||........+.+...+++|+.++.++++++.. .+ .++||++||.+++.+....
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~- 168 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA- 168 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC-
Confidence 88776 78999999998755445667889999999999999999743 22 4699999999776544210
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHH-cCC
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL-QGC 215 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~-~g~ 215 (323)
.+. ...|+.||.+.+.+++.++.++ |+++++++||.|++|..... .....+.... ...
T Consensus 169 -----------~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~ 230 (278)
T 3sx2_A 169 -----------DPG-----SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATD 230 (278)
T ss_dssp -----------SHH-----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC
T ss_pred -----------CCC-----chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhh
Confidence 010 1449999999999999988774 79999999999999975421 1111121111 111
Q ss_pred C-CCccCc-CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 216 T-DTYENF-FMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 216 ~-~~~~~~-~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
. ...... ...+++++|+|++++.++.... ..|+ +++.+
T Consensus 231 ~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 273 (278)
T 3sx2_A 231 TPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA 273 (278)
T ss_dssp --CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence 1 111111 1458899999999999987543 3455 55544
No 108
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.96 E-value=1.5e-27 Score=200.29 Aligned_cols=220 Identities=18% Similarity=0.143 Sum_probs=159.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---C
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---G 77 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~ 77 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+.++.. +..+++ .+.+++.+|++|.++++++++ +
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD--SLVREC----PGIEPVCVDLGDWEATERALGSVGP 76 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHS----TTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCC
Confidence 3456789999999999999999999999999999998642211 122222 246778999999999999887 5
Q ss_pred CCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEecccccccCCCCCCCCccccCCC
Q 020608 78 CTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
+|+|||+||...... ..+.+...+++|+.++.++++++... + .++||++||..++.+...
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 145 (244)
T 3d3w_A 77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN----------- 145 (244)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----------
T ss_pred CCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC-----------
Confidence 799999999754321 34567789999999999999987542 4 579999999865543221
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
...|+.+|.+.|.+++.++.+ .+++++++|||.++++........ ......+..+.+ ...
T Consensus 146 ----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~ 208 (244)
T 3d3w_A 146 ----------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRIP------LGK 208 (244)
T ss_dssp ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TTHHHHHHHTCT------TCS
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-hHHHHHHHhhCC------CCC
Confidence 145999999999999998876 489999999999999853210000 011122222221 134
Q ss_pred cccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 226 SVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+++++|+|++++.++.... ..|+ |+++++
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 3d3w_A 209 FAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 7899999999999997542 2454 667543
No 109
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.96 E-value=1.1e-27 Score=201.65 Aligned_cols=220 Identities=17% Similarity=0.084 Sum_probs=160.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-CCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-ADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ..+.+.. .+.++.++.+|++|.++++++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKA--VAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999999996432221 1122211 13468899999999999888876
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++ ++.+.++||++||..++++....
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------- 154 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ-------- 154 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC--------
Confidence 789999999975432 234466789999999998877765 34456899999998666654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+. +++++++|||.+++|...... ...........+ .
T Consensus 155 -------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~------~ 212 (248)
T 2pnf_A 155 -------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---EEIKQKYKEQIP------L 212 (248)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCT------T
T ss_pred -------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---HHHHHHHHhcCC------C
Confidence 349999999999999887663 899999999999998643211 111222222221 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+++++|+|++++.++.... ..|+ |+++++
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 213 GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 237899999999999987532 2344 666543
No 110
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.3e-27 Score=202.23 Aligned_cols=232 Identities=19% Similarity=0.078 Sum_probs=162.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+.+...+.++.++.+|++|.++++++++
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTE--VEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999987432 223334444445678999999999998887765
Q ss_pred ---CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++ ++.+.++||++||.++....+..
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~------ 175 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTP------ 175 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCST------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCC------
Confidence 78999999997532 1234567889999999999999998 44556799999998665422110
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHH-HcCCCCCcc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRL-LQGCTDTYE 220 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~-~~g~~~~~~ 220 (323)
....|+.+|.+.+.+++.++.+. |+++++++||.+.+|........... .... ........+
T Consensus 176 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p 241 (283)
T 3v8b_A 176 -------------GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-ETAIPVEWPKGQVP 241 (283)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-HHSCCCBCTTCSCG
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-hhhhhhhhhhhcCc
Confidence 01449999999999999998874 89999999999999865432111110 0000 000000011
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.....+..++|+|++++.++.... ..|+ +++.++
T Consensus 242 ~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 242 ITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp GGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 111236789999999999987543 3455 445443
No 111
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.96 E-value=1.1e-27 Score=202.37 Aligned_cols=222 Identities=15% Similarity=0.106 Sum_probs=164.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE--AVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998653222 2233333335678999999999998887765
Q ss_pred --CCCEEEEcccCCccC---CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVD---KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 157 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM--------- 157 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC---------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc---------
Confidence 789999999976432 2445678899999999999999973 4455799999999766544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.+|...... .......+....+ ..
T Consensus 158 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~ 217 (256)
T 3gaf_A 158 ------------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTP------LG 217 (256)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCT------TS
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCC------CC
Confidence 349999999999999988774 899999999999987432111 1112222222221 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++.... ..|+ +++.++
T Consensus 218 r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG 250 (256)
T 3gaf_A 218 RLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence 36799999999999997533 2455 666543
No 112
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.96 E-value=6e-27 Score=201.68 Aligned_cols=228 Identities=15% Similarity=0.092 Sum_probs=163.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---CC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---GC 78 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~ 78 (323)
++++|++|||||+|+||++++++|+++|++|++++|+..+. .+..+.+ ..+++++.+|++|.++++++++ ++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG--EAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 46789999999999999999999999999999999974222 2222222 3578999999999999999887 56
Q ss_pred CEEEEcccCCccC--CCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhc
Q 020608 79 TGVFHLASPCIVD--KVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCR 156 (323)
Q Consensus 79 d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 156 (323)
|+|||+||..... .+.+.+...+++|+.++.++++++.....++||++||.+++.+.... .....+..+..+.
T Consensus 88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~--~~~~~~~~~~~~~--- 162 (291)
T 3rd5_A 88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL--EDLNWRSRRYSPW--- 162 (291)
T ss_dssp EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS--SCTTCSSSCCCHH---
T ss_pred CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc--ccccccccCCCCc---
Confidence 9999999976432 25677889999999999999999988777799999999776654321 1111222222222
Q ss_pred cCCCchHHHHHHHHHHHHHHHHhC---C--ccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHH
Q 020608 157 QNEIWYPLSKTLAEKAAWEFAKEK---G--LDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKD 231 (323)
Q Consensus 157 ~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D 231 (323)
..|+.||.+.+.+++.++.++ | +++++++||.|.++........ ....+ ... + ..+...+++|
T Consensus 163 ---~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~---~~~~~-~~~----~-~~~~~~~~~~ 230 (291)
T 3rd5_A 163 ---LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK---LGDAL-MSA----A-TRVVATDADF 230 (291)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHH
T ss_pred ---chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH---HHHHH-HHH----H-HHHHhCCHHH
Confidence 459999999999999888774 4 9999999999999865432110 00010 000 0 0111335999
Q ss_pred HHHHHHHhhcCCCCCccEEE
Q 020608 232 VALAHILVYENPSACGRHLC 251 (323)
Q Consensus 232 ~a~~~~~~~~~~~~~~~~~~ 251 (323)
+|.+++.++..+...|+|..
T Consensus 231 ~A~~~~~l~~~~~~~G~~~~ 250 (291)
T 3rd5_A 231 GARQTLYAASQDLPGDSFVG 250 (291)
T ss_dssp HHHHHHHHHHSCCCTTCEEE
T ss_pred HHHHHHHHHcCCCCCCceeC
Confidence 99999999988766777653
No 113
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.96 E-value=4.6e-27 Score=199.16 Aligned_cols=225 Identities=19% Similarity=0.136 Sum_probs=161.7
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh-----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV----- 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----- 75 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.+++++++
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN--DCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467799999999999999999999999999999998753222 222233222447889999999999888776
Q ss_pred ---cCCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 76 ---TGCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 76 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
.++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+.+.
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 155 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY------- 155 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT-------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-------
Confidence 4689999999975321 234567889999999999999998 3456689999999866543321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCC--CchhHHHHHHHHcCCCCCc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPT--LNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~--~~~~~~~~~~~~~g~~~~~ 219 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.+|..... .......+..+....+
T Consensus 156 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (260)
T 2ae2_A 156 --------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA--- 218 (260)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---
Confidence 1349999999999999998775 89999999999998742110 0000111112222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 219 ---~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 219 ---LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253 (260)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 1237899999999999987532 2455 556543
No 114
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=203.29 Aligned_cols=220 Identities=20% Similarity=0.149 Sum_probs=156.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCC-------CCeEEEEccCCCHhHHHHHh
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGAD-------TRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~ 75 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.+.. .+..+.+...+ .++.++.+|++|.+++++++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 82 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAA--QETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL 82 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence 5678999999999999999999999999999999874322 22223332222 46889999999999888777
Q ss_pred cC-------C-CEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEecccccccCCCCC
Q 020608 76 TG-------C-TGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISSITPSPKW 138 (323)
Q Consensus 76 ~~-------~-d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~ 138 (323)
++ + |+|||+||..... .+.+.+...+++|+.++.++++++... + .++||++||..++++...
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 161 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG- 161 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT-
T ss_pred HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC-
Confidence 63 4 9999999975432 244567889999999999999997543 3 469999999876665431
Q ss_pred CCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC
Q 020608 139 PADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC 215 (323)
Q Consensus 139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~ 215 (323)
...|+.+|.+.+.+++.++.+ .|++++++|||.+++|..... .......+..+.
T Consensus 162 --------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~ 218 (264)
T 2pd6_A 162 --------------------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMI 218 (264)
T ss_dssp --------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC
T ss_pred --------------------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhC
Confidence 134999999999999998877 699999999999999864321 001111111111
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+ ...+++++|+|++++.++.... ..|+ +++.++
T Consensus 219 ----~--~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 254 (264)
T 2pd6_A 219 ----P--MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254 (264)
T ss_dssp ----T--TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----C--CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 1 1237899999999999987532 3344 556543
No 115
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.95 E-value=4.9e-27 Score=197.44 Aligned_cols=219 Identities=18% Similarity=0.139 Sum_probs=162.7
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+. ....++.+|++|.++++++++
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ--AISDYLG---DNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999998743222 2222222 257889999999999888776
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+.++||++||.++..+....
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------- 152 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ------- 152 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC-------
Confidence 7899999999764322 4557788999999999999999743 455799999999777655321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+.+.++.++ |+++++++||.+.+|....... ..........+
T Consensus 153 --------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~p------ 209 (248)
T 3op4_A 153 --------------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND---EQRTATLAQVP------ 209 (248)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH---HHHHHHHHTCT------
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH---HHHHHHHhcCC------
Confidence 349999999999999888764 8999999999999986543221 12222222221
Q ss_pred CCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 223 FMGSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++..... .|+ +++.++
T Consensus 210 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG 244 (248)
T 3op4_A 210 AGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244 (248)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 12367899999999999875432 455 556543
No 116
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.95 E-value=4.8e-27 Score=196.03 Aligned_cols=229 Identities=18% Similarity=0.096 Sum_probs=167.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|+|++|++|||||++.||+++++.|+++|++|++.+|+.+ ...+..+++...+.++.++.+|++|+++++++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~--~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED--RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999998643 2233344454446689999999999999887765
Q ss_pred ---CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|++|||||.... ..+.+.|+..+++|+.++..+.+++. +.+-+++|++||.++..+.+..
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~------ 154 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG------ 154 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC------
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC------
Confidence 68999999996432 12556789999999999999998873 3455799999999776654321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.+|.....+.+.++.+. |++++.|.||.+-.|.................+..+ +.
T Consensus 155 ---------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---~~ 216 (254)
T 4fn4_A 155 ---------------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS---LS 216 (254)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT---TC
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC---CC
Confidence 349999999999999888774 899999999999988643322211111112111111 10
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCccEEEEcCccC
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGRHLCVEAISH 257 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~~ 257 (323)
+ .+..++|+|.+++.++.... -.|+.+..+..+|
T Consensus 217 ~--R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 217 S--RLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp C--CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred C--CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 1 14578999999999997543 2455444443333
No 117
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.95 E-value=2.4e-28 Score=212.67 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=163.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc--HHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD--ERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|+ +||+|+|||||||||++++++|+++|++|+++.|+.+. ....+.+..+. ..+++++.+|++|++++.++++++
T Consensus 1 M~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 1 MD-KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp -C-CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CC-CCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCC
Confidence 54 36899999999999999999999999999999998643 22222222222 247899999999999999999999
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhcc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQ 157 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 157 (323)
|+|||+++.... ..|+.++.+++++|++.+ +++||+ |+. .... ... +.+..|.
T Consensus 78 d~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~---g~~~----~~~---~~~~~p~---- 131 (313)
T 1qyd_A 78 DVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SEF---GMDP----DIM---EHALQPG---- 131 (313)
T ss_dssp SEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SCC---SSCT----TSC---CCCCSST----
T ss_pred CEEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cCC---cCCc----ccc---ccCCCCC----
Confidence 999999986422 125678899999999998 999985 432 1111 110 1111110
Q ss_pred CCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC-Cc--cCcCCCcccHHHHHH
Q 020608 158 NEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD-TY--ENFFMGSVHFKDVAL 234 (323)
Q Consensus 158 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~i~v~D~a~ 234 (323)
.+.| .+|..+|.+++ +.+++++++||+.++|+.......... .....+... .. ++..++++|++|+|+
T Consensus 132 -~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 202 (313)
T 1qyd_A 132 -SITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202 (313)
T ss_dssp -THHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred -cchH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence 1348 99999998874 568999999999998853221110000 000111111 12 344567999999999
Q ss_pred HHHHhhcCCCC-CccEEE-E-cCccCHHHHHHHHHHHCCC
Q 020608 235 AHILVYENPSA-CGRHLC-V-EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 235 ~~~~~~~~~~~-~~~~~~-~-~~~~~~~e~~~~i~~~~~~ 271 (323)
+++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus 203 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 242 (313)
T 1qyd_A 203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 242 (313)
T ss_dssp HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred HHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence 99999987654 334665 4 4689999999999999874
No 118
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.95 E-value=1.5e-27 Score=201.41 Aligned_cols=223 Identities=16% Similarity=0.110 Sum_probs=158.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCe-EEEEccCCCHhHHHHHh----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRL-RLFQIDLLDYDAIAAAV---- 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~---- 75 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.++.. +..+.+ +.++ .++.+|++|.+++++++
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD--RAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999743222 222222 1256 88999999999888776
Q ss_pred --cCCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 76 --TGCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 76 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
.++|+|||+||...... ..+.+...+++|+.++.++++++ ++.+.++||++||.+++.+.+..
T Consensus 82 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------- 154 (254)
T 2wsb_A 82 AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ------- 154 (254)
T ss_dssp HHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-------
T ss_pred hhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC-------
Confidence 47899999999754322 23446788999999988887775 34456899999998665543211
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
+...|+.+|.+.+.+++.++.+. |++++++|||.+++|..... .........+....+
T Consensus 155 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------ 215 (254)
T 2wsb_A 155 ------------FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM-RERPELFETWLDMTP------ 215 (254)
T ss_dssp ------------CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH-HTCHHHHHHHHHTST------
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc-ccChHHHHHHHhcCC------
Confidence 01449999999999999988774 89999999999999853210 000112223333221
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 216 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 216 MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 1237899999999999986532 3455 556554
No 119
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.95 E-value=9.8e-27 Score=197.71 Aligned_cols=219 Identities=16% Similarity=0.111 Sum_probs=160.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+....... .+.+ +.++.++.+|++|.++++++++
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--AKKL---GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--HHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH--HHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567789999999999999999999999999999999987544322 2222 2478999999999999888876
Q ss_pred ---CCCEEEEcccCCccC----------CCCCchhhhhhHHHHHHHHHHHHHhhC----------CcCEEEEeccccccc
Q 020608 77 ---GCTGVFHLASPCIVD----------KVEDPQNQLLNPAVKGTVNVLTAAKAL----------GVKRVVVTSSISSIT 133 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~ 133 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++... +.++||++||..++.
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 162 (265)
T 2o23_A 83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 162 (265)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence 799999999975432 233457789999999999999997543 567999999997665
Q ss_pred CCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHH
Q 020608 134 PSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLR 210 (323)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~ 210 (323)
+... ...|+.+|.+.+.+++.++.+ .++++++++||.+.++...... ......
T Consensus 163 ~~~~---------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~ 218 (265)
T 2o23_A 163 GQVG---------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EKVCNF 218 (265)
T ss_dssp CCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CH
T ss_pred CCCC---------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC---HHHHHH
Confidence 4321 134999999999999888776 4899999999999998643210 001111
Q ss_pred HHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 211 LLQGCTDTYENFFMGSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 211 ~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
.....+ . ...+++++|+|++++.+++.....|+ +.+.+
T Consensus 219 ~~~~~~----~-~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 219 LASQVP----F-PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp HHHTCS----S-SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHcCC----C-cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence 111111 1 02367999999999999986655566 55543
No 120
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.95 E-value=3.3e-27 Score=205.77 Aligned_cols=237 Identities=18% Similarity=0.134 Sum_probs=158.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc--HHHHHHHh-hccCCCCCeEEEEccCCCHhHHHHHhc-
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD--ERETAHLK-ALEGADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
|+|++|++|||||+|+||++++++|+++|++|+++.|+... ....+.+. .+...+.++.++.+|++|.++++++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 78888999999999999999999999999999999987422 22222222 122224578999999999999888776
Q ss_pred ------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCc
Q 020608 77 ------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||...... +.+.+...+++|+.|+.++++++ ++.+.+++|++||.++......
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~----- 155 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP----- 155 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-----
Confidence 7999999999754322 44567788999999999999998 5556789999999966543221
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCC
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCT 216 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~ 216 (323)
....|+.||.+.+.+++.++.+ +|+++++++||.+.++...... ...............
T Consensus 156 ---------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (324)
T 3u9l_A 156 ---------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPN 220 (324)
T ss_dssp ---------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTT
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccc
Confidence 0134999999999999998877 5999999999999876432110 000111111111111
Q ss_pred CCccCc--------CCCcccHHHHHHHHHHhhcCCCC--CccEEEEcCccC
Q 020608 217 DTYENF--------FMGSVHFKDVALAHILVYENPSA--CGRHLCVEAISH 257 (323)
Q Consensus 217 ~~~~~~--------~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~~~~ 257 (323)
...+.. ..+..+++|+|.+++.+++.+.. ...+.+++....
T Consensus 221 ~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~ 271 (324)
T 3u9l_A 221 AGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG 271 (324)
T ss_dssp TTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred cCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence 110100 01135889999999999987643 223455554444
No 121
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=5.8e-28 Score=197.67 Aligned_cols=193 Identities=17% Similarity=0.107 Sum_probs=149.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---CCCEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---GCTGVF 82 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~Vi 82 (323)
|+||||||+|+||++++++|+++ +|++++|++.+.. .....+. . +++.+|++|+++++++++ ++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~--~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALA--ELAREVG----A-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHH--HHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHH--HHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 68999999999999999999988 9999998642221 1122221 1 788999999999999988 899999
Q ss_pred EcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 83 HLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 83 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+||..... ...+++...+++|+.++.++++++++.+.++||++||.+++.+...
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~--------------------- 130 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG--------------------- 130 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT---------------------
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC---------------------
Confidence 999975432 2456788899999999999999997767789999999966654321
Q ss_pred CCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALA 235 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~ 235 (323)
...|+.+|.+.|.+++.++.+ +|++++++|||.++++.... .+ .....+++++|+|++
T Consensus 131 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------~~------~~~~~~~~~~dva~~ 191 (207)
T 2yut_A 131 FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------LG------GPPKGALSPEEAARK 191 (207)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------GT------SCCTTCBCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------cC------CCCCCCCCHHHHHHH
Confidence 145999999999999998877 59999999999999975110 11 122558999999999
Q ss_pred HHHhhcCCCCCc
Q 020608 236 HILVYENPSACG 247 (323)
Q Consensus 236 ~~~~~~~~~~~~ 247 (323)
++.+++++..+.
T Consensus 192 ~~~~~~~~~~~~ 203 (207)
T 2yut_A 192 VLEGLFREPVPA 203 (207)
T ss_dssp HHHHHC--CCCS
T ss_pred HHHHHhCCCCcc
Confidence 999998766543
No 122
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.95 E-value=3.1e-27 Score=200.69 Aligned_cols=223 Identities=16% Similarity=0.167 Sum_probs=157.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.++||++|||||+|+||++++++|+++|++|+++.|+.... .....+.+...+.++.++.+|++|.++++++++
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTA-METMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999998875321 112222222234578999999999999888776
Q ss_pred --CCCEEEEcccCCcc------CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 --GCTGVFHLASPCIV------DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 --~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||.... ....+.+...+++|+.++.++++++ ++.+.+++|++||.++....+. +
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~----- 156 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW-I----- 156 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC-T-----
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC-C-----
Confidence 78999999994211 1244567889999999999999998 5556679999999843311110 0
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
....|+.+|.+.+.+++.++.+ .|+++++++||.+++|...... .......... .+
T Consensus 157 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~----~p- 215 (264)
T 3i4f_A 157 -------------YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---QEARQLKEHN----TP- 215 (264)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---HHHHHC-----------
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---HHHHHHHhhc----CC-
Confidence 1145999999999999998877 5899999999999998654321 1111111111 11
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 216 -~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG 249 (264)
T 3i4f_A 216 -IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG 249 (264)
T ss_dssp ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred -CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence 1236789999999999997543 2455 56644
No 123
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.95 E-value=1.4e-27 Score=204.03 Aligned_cols=224 Identities=18% Similarity=0.112 Sum_probs=161.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.++++++++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR--TTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999753222 2222332224578899999999999887766
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC------CcCEEEEecccccccCCCCCCCCccc
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL------GVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++... +.++||++||.+++++...
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------- 169 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH------- 169 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT-------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC-------
Confidence 689999999975332 134457889999999999999997654 5579999999966654321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCch--h------HHHHHHHHc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNA--S------MLMLLRLLQ 213 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~--~------~~~~~~~~~ 213 (323)
...|+.+|.+.+.+++.++.+ .|+++++++||.+++|........ . .........
T Consensus 170 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 2rhc_B 170 --------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA 235 (277)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred --------------CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh
Confidence 134999999999999998876 489999999999998742110000 0 001111111
Q ss_pred CCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 214 GCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 214 g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.. ....+++++|+|++++.++..+. ..|+ +++.++
T Consensus 236 ~~------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 236 RV------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273 (277)
T ss_dssp HS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cC------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 11 11237899999999999987542 2444 566544
No 124
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.95 E-value=2.1e-27 Score=200.66 Aligned_cols=222 Identities=14% Similarity=0.099 Sum_probs=159.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
|++|++|||||+|+||++++++|+++|++|++++|+.. ... .+.+...+.++.++.+|++|.++++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~---~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APA---LAEIARHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHH---HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHH---HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999765 222 22222224568889999999999988877
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++ ++.+.++||++||.+++.+.+.
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 147 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG---------- 147 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC----------
Confidence 799999999975432 134567889999999888777765 4566789999999966654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHH---H----HHHHcCCCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLM---L----LRLLQGCTD 217 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~---~----~~~~~g~~~ 217 (323)
...|+.+|...+.+.+.++.+. |+++++++||.+++|............ . ..+....
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 214 (255)
T 2q2v_A 148 -----------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK-- 214 (255)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT--
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc--
Confidence 1349999999999999998774 899999999999998532100000000 0 1110111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.....+++++|+|++++.++.... ..|+ +++.++
T Consensus 215 ---~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 215 ---QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251 (255)
T ss_dssp ---CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence 112347899999999999987543 2354 566543
No 125
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.95 E-value=6.1e-29 Score=210.03 Aligned_cols=227 Identities=18% Similarity=0.112 Sum_probs=155.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----CCCE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----GCTG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~ 80 (323)
||+||||||+||||++++++|+++|++|++++|++++... .+.+|++|.++++++++ ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCCCccE
Confidence 4799999999999999999999999999999997643210 15789999999888886 8999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC----CcCEEEEecccccccCCCCCCCCccccCC-------CC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL----GVKRVVVTSSISSITPSPKWPADKVKDED-------CW 149 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~e~-------~~ 149 (323)
|||+||.... ..++...+++|+.++.++++++.+. +.+++|++||.+++.+... ..+..|. .+
T Consensus 66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~~~~~~~~~~~~~~ 139 (255)
T 2dkn_A 66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA---ELPMVEAMLAGDEARA 139 (255)
T ss_dssp EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG---GCHHHHHHHHTCHHHH
T ss_pred EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc---ccchhhhhcccchhhh
Confidence 9999997531 3567889999999999999987543 5689999999976654321 1111110 00
Q ss_pred CCh-hhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 150 TDE-EYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 150 ~~~-~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
... .....+.+.|+.+|.+.|.+++.++.+ .|++++++|||.++||........ .......... .+ ....
T Consensus 140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~---~~-~~~~ 213 (255)
T 2dkn_A 140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD--PRYGESTRRF---VA-PLGR 213 (255)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC--TTTHHHHHSC---CC-TTSS
T ss_pred hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc--hhhHHHHHHH---HH-HhcC
Confidence 000 000011256999999999999988766 699999999999999853110000 0000111100 01 2335
Q ss_pred cccHHHHHHHHHHhhcCC--CCCc-cEEEEc-CccCH
Q 020608 226 SVHFKDVALAHILVYENP--SACG-RHLCVE-AISHY 258 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~-~~~~~ 258 (323)
++|++|+|++++.++..+ ...| .|++++ ..+++
T Consensus 214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 250 (255)
T 2dkn_A 214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM 250 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence 899999999999999865 2334 477754 34444
No 126
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.95 E-value=7.7e-27 Score=199.11 Aligned_cols=225 Identities=17% Similarity=0.136 Sum_probs=157.7
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh-----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV----- 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----- 75 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.+++++++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD--ECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3466799999999999999999999999999999999753222 222233222457889999999999888776
Q ss_pred ---cCCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccc
Q 020608 76 ---TGCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 76 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
.++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.++||++||.+++.+.+.
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------- 167 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS------- 167 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT-------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC-------
Confidence 47899999999754321 344677889999999999999873 345679999999966554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCch---hHHHHHHHHcCCCCC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNA---SMLMLLRLLQGCTDT 218 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~---~~~~~~~~~~g~~~~ 218 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.+++|........ .......+....+
T Consensus 168 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-- 231 (273)
T 1ae1_A 168 --------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-- 231 (273)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST--
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC--
Confidence 1349999999999999988764 89999999999999864321110 0111122222111
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
. ..+.+++|+|++++.++.... ..|+ +++.+.
T Consensus 232 --~--~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 266 (273)
T 1ae1_A 232 --M--GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 266 (273)
T ss_dssp --T--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --C--CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence 1 136799999999999987432 2455 555443
No 127
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.95 E-value=2.6e-27 Score=201.42 Aligned_cols=219 Identities=17% Similarity=0.118 Sum_probs=163.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|+++.|+.. ....+..+.+...+.++.++.+|++|.++++++++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-GAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999988532 22222233333334578999999999999888776
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.++||++||.++..+....
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 175 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ------- 175 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC-------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc-------
Confidence 789999999976432 2456678899999999999999873 3455799999999777654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+.+.++.+ .|+++++++||.+.+|.... . .........+
T Consensus 176 --------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~--~~~~~~~~~p------ 229 (269)
T 4dmm_A 176 --------------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----L--AAEKLLEVIP------ 229 (269)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----H--HHHHHGGGCT------
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----c--cHHHHHhcCC------
Confidence 34999999999999988876 48999999999999986431 1 1112222211
Q ss_pred CCCcccHHHHHHHHHHhhcCCCC---Ccc-EEEEc
Q 020608 223 FMGSVHFKDVALAHILVYENPSA---CGR-HLCVE 253 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~~---~~~-~~~~~ 253 (323)
...+.+++|+|++++.++..+.. .|+ +++.+
T Consensus 230 ~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 230 LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG 264 (269)
T ss_dssp TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence 12367899999999999987332 355 56654
No 128
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.95 E-value=6.8e-28 Score=204.03 Aligned_cols=221 Identities=17% Similarity=0.147 Sum_probs=162.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecC-CCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKN-LSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+ +..... ..+.+...+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDE--TIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHH--HHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHH--HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999998 544332 122222223578899999999999888877
Q ss_pred --CCCEEEEcccC-CccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC--c---CEEEEeccccccc-CCCCCC
Q 020608 77 --GCTGVFHLASP-CIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG--V---KRVVVTSSISSIT-PSPKWP 139 (323)
Q Consensus 77 --~~d~Vih~a~~-~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~---~~~v~~SS~~~~~-~~~~~~ 139 (323)
++|+|||+||. .... ...+.+...+++|+.++.++++++.. .+ . +++|++||..++. +...
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-- 160 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG-- 160 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT--
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC--
Confidence 79999999996 3221 13345678899999999999997632 22 2 6999999986554 2211
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
...|+.+|.+.|.+++.++.+. |++++++|||.+++|..... .......+..+.+
T Consensus 161 -------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~ 218 (258)
T 3afn_B 161 -------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP 218 (258)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT
T ss_pred -------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC
Confidence 1459999999999999888764 89999999999999865432 1122333333322
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC---CCcc-EEEEcCc
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS---ACGR-HLCVEAI 255 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~~~ 255 (323)
...+++++|+|++++.++.... ..|+ |+++++.
T Consensus 219 ------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 219 ------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp ------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred ------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 1247899999999999987532 2344 7776553
No 129
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.95 E-value=1.8e-26 Score=195.13 Aligned_cols=221 Identities=16% Similarity=0.103 Sum_probs=163.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEE-ecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-VKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
++|++|||||+|+||++++++|+++|++|+++ .|+. ....+..+.+...+.++.++.+|++|.++++++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999987 5653 22223333444445689999999999999887765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... ...+.+...+++|+.++.++++++ ++.+.++||++||.+++.+....
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------- 151 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY--------- 151 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc---------
Confidence 579999999965332 244567789999999999999997 34456799999999766544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+++.++.++ |+++++++||.+.+|....... ............+ ..
T Consensus 152 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~ 212 (258)
T 3oid_A 152 ------------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTP------AG 212 (258)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCT------TS
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCC------CC
Confidence 449999999999999998875 8999999999999986432221 1122222222221 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++.... ..|+ +++.++
T Consensus 213 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 213 RMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp SCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 36789999999999997643 2455 566543
No 130
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.6e-26 Score=196.70 Aligned_cols=221 Identities=19% Similarity=0.129 Sum_probs=161.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|+++.|+.. ....+..+.+...+.++.++.+|++|.++++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA-ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999877642 22223333333335678999999999999888776
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... ..+++|++||..+......
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~----------- 175 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP----------- 175 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST-----------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC-----------
Confidence 7899999999754322 45567889999999999999998654 3469999999744432110
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
....|+.+|.+.+.+++.++.+. |+++++++||.|.+|......... .......+. ..
T Consensus 176 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~------~r 236 (271)
T 3v2g_A 176 ---------GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERIAT------GS 236 (271)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTCTT------SS
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcCCC------CC
Confidence 01449999999999999988774 899999999999998754322111 112222111 12
Q ss_pred cccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 226 SVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
+.+++|+|++++.++.... ..|+ +++.+
T Consensus 237 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 267 (271)
T 3v2g_A 237 YGEPQDIAGLVAWLAGPQGKFVTGASLTIDG 267 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence 6689999999999986432 3455 45544
No 131
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.95 E-value=3.6e-27 Score=199.82 Aligned_cols=221 Identities=18% Similarity=0.108 Sum_probs=159.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.++++++++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD--RTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999753222 2222332224578889999999998887765
Q ss_pred -CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++. +.+.++||++||.+++.+...
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 160 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN--------- 160 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC---------
Confidence 79999999996421 12345678899999999999998864 456689999999966554321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.++....... .......+.... ..
T Consensus 161 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~ 221 (260)
T 2zat_A 161 ------------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL------RI 221 (260)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH------TC
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC------CC
Confidence 1349999999999999988764 8999999999999885321000 000011111111 11
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+++++|+|+++..++.... ..|+ +++.+
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 254 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGG 254 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 237899999999999987543 2344 66753
No 132
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.95 E-value=5.6e-27 Score=197.40 Aligned_cols=219 Identities=16% Similarity=0.089 Sum_probs=150.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+... .. .++.++.+|++|.++++++++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----------~~--~~~~~~~~D~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQ--YPFATEVMDVADAAQVAQVCQRLLA 70 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----------SC--CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----------hc--CCceEEEcCCCCHHHHHHHHHHHHH
Confidence 67788999999999999999999999999999999997642 11 137889999999999888776
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------- 142 (250)
T 2fwm_X 71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG-------- 142 (250)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC--------
Confidence 7899999999754321 34567889999999999999988 4445689999999966544321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHH-HHHc-CCCCCcc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLL-RLLQ-GCTDTYE 220 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~-~~~~-g~~~~~~ 220 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.+++|....... ...... .+.. .......
T Consensus 143 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 208 (250)
T 2fwm_X 143 -------------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLG 208 (250)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhccccc
Confidence 1449999999999999988764 8999999999999986432100 000000 1100 0000000
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.....+.+++|+|++++.++.... ..|+ +++.+
T Consensus 209 ~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 244 (250)
T 2fwm_X 209 IPLGKIARPQEIANTILFLASDLASHITLQDIVVDG 244 (250)
T ss_dssp -------CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 011236799999999999987542 3455 45544
No 133
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.95 E-value=4.5e-27 Score=200.34 Aligned_cols=222 Identities=15% Similarity=0.075 Sum_probs=162.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.. ..+..+.+...+.++.++.+|++|.++++++.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG---VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH---HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH---HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 467899999999999999999999999999999986532 223333344445678999999999998877654
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||..++.+....
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~--------- 175 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV--------- 175 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC---------
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC---------
Confidence 7899999999764322 44567889999999999999987 33456799999999776554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+++|...... ........+....+ ..
T Consensus 176 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~~ 236 (273)
T 3uf0_A 176 ------------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARIP------AG 236 (273)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHST------TS
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcCC------CC
Confidence 34999999999999999877 5899999999999998532110 01111222222221 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++.... ..|+ +++.++
T Consensus 237 r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG 269 (273)
T 3uf0_A 237 RWATPEDMVGPAVFLASDAASYVHGQVLAVDGG 269 (273)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 36789999999999997532 3455 556543
No 134
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.3e-26 Score=198.21 Aligned_cols=223 Identities=19% Similarity=0.095 Sum_probs=162.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+.+...+.++.++.+|++|.++++++++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA--LAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHH--HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999887432 223333444445688999999999999888765
Q ss_pred -CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccc-cCCCCCCCCcccc
Q 020608 77 -GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSI-TPSPKWPADKVKD 145 (323)
Q Consensus 77 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~-~~~~~~~~~~~~~ 145 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++. +.+.+++|++||..++ .+...
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 155 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG-------- 155 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT--------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC--------
Confidence 78999999996532 12456678899999999999999874 3445699999998655 22211
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC-chhHHHHHHHHcCCCCCccC
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL-NASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.||.+.+.+++.++.++ |+++++++||.+.+|...... .........+....+
T Consensus 156 -------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----- 217 (280)
T 3tox_A 156 -------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA----- 217 (280)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST-----
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc-----
Confidence 1449999999999999988774 899999999999998643211 001112222222221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 218 -~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 252 (280)
T 3tox_A 218 -LKRIARPEEIAEAALYLASDGASFVTGAALLADGG 252 (280)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence 1236789999999999997643 3455 556543
No 135
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.95 E-value=2.3e-27 Score=199.24 Aligned_cols=219 Identities=18% Similarity=0.127 Sum_probs=156.6
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEE-ecCCCcHHHHHHHhhccCCCCCeEE-EEccCCCHhHHHHHhc------
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-VKNLSDERETAHLKALEGADTRLRL-FQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~------ 76 (323)
||+||||||+|+||++++++|+++|++|+++ .|+.+... +..+.+...+.++.. +.+|++|.++++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE--EVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHH--HHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999999998 67542222 222222222345666 8999999998887754
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++ ++.+.++||++||..++++....
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------- 149 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ--------- 149 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSB---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCC---------
Confidence 789999999975421 234567789999999966666554 45567899999998766654311
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.+. |++++++|||.+++|...... .........+.+ ..
T Consensus 150 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~------~~ 208 (245)
T 2ph3_A 150 ------------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---QEVKEAYLKQIP------AG 208 (245)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHHTCT------TC
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---HHHHHHHHhcCC------CC
Confidence 349999999999999888764 899999999999998543211 112222222221 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcCc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEAI 255 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~~ 255 (323)
.+++++|+|++++.++..+. ..|+ ++++++.
T Consensus 209 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 209 RFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 47899999999999987532 2344 6676543
No 136
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.95 E-value=3.6e-27 Score=199.77 Aligned_cols=224 Identities=13% Similarity=0.050 Sum_probs=157.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC--CCCeEEEEccCCCHhHHHHHhc--
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA--DTRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... ..++.++.+|++|.++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLE--AAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 3467789999999999999999999999999999999753222 222222211 2268899999999999888876
Q ss_pred ----CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ----GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++. +.+.++||++||..++.+...
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 153 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD------- 153 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC-------
Confidence 599999999965322 2345678899999999988777763 445689999999966554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCc-------hhHHH-HHHHHc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLN-------ASMLM-LLRLLQ 213 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~-------~~~~~-~~~~~~ 213 (323)
...|+.+|...+.+.+.++.+. |+++++++||.+++|....... ..... ...+..
T Consensus 154 --------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T 2z1n_A 154 --------------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS 219 (260)
T ss_dssp --------------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------
T ss_pred --------------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh
Confidence 1349999999999999888764 8999999999999986541100 00000 011111
Q ss_pred CCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 214 GCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 214 g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
. .+. ..+.+++|+|++++.++.... ..|+ +++.+
T Consensus 220 ~----~p~--~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG 256 (260)
T 2z1n_A 220 R----IPM--GRVGKPEELASVVAFLASEKASFITGAVIPVDG 256 (260)
T ss_dssp C----CTT--SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred c----CCC--CCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 1 111 237799999999999987532 3455 45544
No 137
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.95 E-value=1.5e-26 Score=195.90 Aligned_cols=212 Identities=17% Similarity=0.139 Sum_probs=156.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +....+. .++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK--AMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999998743221 2222222 247889999999999888877
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 149 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA---------- 149 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC----------
Confidence 799999999975432 134467789999999997777665 4455679999999966654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.+|.+.+.+++.++.+ +|++++++|||.+++|.... .. ......+ ..
T Consensus 150 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~-----------~~~~~~~--~~ 204 (260)
T 1nff_A 150 -----------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-VP-----------EDIFQTA--LG 204 (260)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-SC-----------TTCSCCS--SS
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc-ch-----------hhHHhCc--cC
Confidence 134999999999999998876 58999999999999986421 00 0000011 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+++++|+|++++.++.... ..|+ +++.++
T Consensus 205 ~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 205 RAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 37899999999999987532 2344 666544
No 138
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.95 E-value=5.3e-27 Score=200.23 Aligned_cols=222 Identities=15% Similarity=0.094 Sum_probs=162.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+++...+.++.++.+|++|.++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQ--VVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999754433 2223333334578999999999999888776
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ .+++|++||.++..+....
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~------- 179 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ------- 179 (276)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS-------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC-------
Confidence 7899999999764422 4456778889999999999998743 22 2689999998665443210
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
....|+.||.+.+.+++.++.+ .|+++++++||.|.++...... ..........+
T Consensus 180 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~----~~~~~~~~~~p------ 237 (276)
T 3r1i_A 180 ------------QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA----DYHALWEPKIP------ 237 (276)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG----GGHHHHGGGST------
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch----HHHHHHHhcCC------
Confidence 0144999999999999999877 5899999999999998653211 11122222111
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 238 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 272 (276)
T 3r1i_A 238 LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272 (276)
T ss_dssp TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence 1226789999999999997533 3455 555543
No 139
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.95 E-value=3.3e-27 Score=199.35 Aligned_cols=218 Identities=15% Similarity=0.072 Sum_probs=158.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCE-EEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH-hHHHHHhc--
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYT-VHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY-DAIAAAVT-- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~-- 76 (323)
|++++|+|+||||+|+||++++++|+++|++ |++++|+... ...+.+.... .+.++.++.+|++|. ++++++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHH
Confidence 8889999999999999999999999999996 9999987642 2222222221 134688999999998 77777665
Q ss_pred -----CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC----C---cCEEEEecccccccCCCCCCCCccc
Q 020608 77 -----GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL----G---VKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 -----~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||.. ..+.+...+++|+.++.++++++... + .++||++||.+++.+...
T Consensus 79 ~~~~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 147 (254)
T 1sby_A 79 FDQLKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ------- 147 (254)
T ss_dssp HHHHSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------
T ss_pred HHhcCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC-------
Confidence 789999999974 45678899999999999999997532 1 358999999966554321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchh--HHHHHHHHcCCCCCc
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNAS--MLMLLRLLQGCTDTY 219 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~--~~~~~~~~~g~~~~~ 219 (323)
...|+.||.+.+.+++.++.+ .|+++++++||.+.+|......... ..........
T Consensus 148 --------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----- 208 (254)
T 1sby_A 148 --------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS----- 208 (254)
T ss_dssp --------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT-----
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc-----
Confidence 134999999999999988876 5899999999999997432110000 0001111111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCCCCccEEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPSACGRHLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 254 (323)
.++.+++|+|++++.+++....+..|++.++
T Consensus 209 ----~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 209 ----HPTQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp ----SCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred ----CCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence 1245899999999999875444444777654
No 140
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.95 E-value=6.6e-27 Score=201.08 Aligned_cols=220 Identities=20% Similarity=0.159 Sum_probs=162.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCC-CCeEEEEccCCCHhHHHHHhc----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGAD-TRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+..... +....+...+ .++.++.+|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELS--SVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH--HHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999764433 2233333323 478999999999998877665
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccc-cCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSI-TPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~~~~~~ 144 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++ ++.+.++||++||..+. .+...
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~------- 188 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG------- 188 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT-------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC-------
Confidence 6799999999764322 44567889999999999999997 35556799999998653 33321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.||.+.+.+++.++.+ +|+++++++||.+++|...... ......+....+.
T Consensus 189 --------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~---- 247 (293)
T 3rih_A 189 --------------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG---EEYISGMARSIPM---- 247 (293)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC---HHHHHHHHTTSTT----
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc---HHHHHHHHhcCCC----
Confidence 144999999999999998877 4899999999999998532111 1223333333221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+..++|+|.+++.++.... ..|+ +++.+
T Consensus 248 --~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 280 (293)
T 3rih_A 248 --GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG 280 (293)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 125689999999999987533 3455 55644
No 141
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.95 E-value=1.8e-26 Score=198.42 Aligned_cols=238 Identities=14% Similarity=0.118 Sum_probs=165.7
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC----------cHHHHHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS----------DERETAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
.+++|++|||||+|+||++++++|+++|++|++++|+.. .....+....+...+.++.++.+|++|.+++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 367899999999999999999999999999999998732 1111122222333356889999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCccC--CCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVD--KVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
+++++ ++|+||||||..... .+.+.+...+++|+.++.++++++... +.+++|++||.+++.+..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---- 162 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA---- 162 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH----
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc----
Confidence 87766 789999999986443 345678899999999999999998664 245999999997766442
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcC--C
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQG--C 215 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g--~ 215 (323)
..+..+..+..+. ..|+.+|.+.+.+++.++.++ |+++++++||.|.+|...... . ....... .
T Consensus 163 ~~~~~~~~~~~~~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~---~~~~~~~~~~ 231 (287)
T 3pxx_A 163 QPPGAGGPQGPGG------AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP--M---YRQFRPDLEA 231 (287)
T ss_dssp CCC-----CHHHH------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHH--H---HHHHCTTSSS
T ss_pred ccccccccCCCcc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc--h---hhhhcccccc
Confidence 1122222221111 459999999999999998775 899999999999998754210 0 0000000 0
Q ss_pred C---------CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 216 T---------DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 216 ~---------~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+ .........+.+++|+|++++.++.... ..|+ +++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG 282 (287)
T 3pxx_A 232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282 (287)
T ss_dssp CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence 0 0000111348899999999999996533 3455 556443
No 142
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.95 E-value=3.5e-27 Score=199.15 Aligned_cols=219 Identities=17% Similarity=0.148 Sum_probs=140.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+.. .+..+++...+.++.++.+|++|.++++++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA--EAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 667889999999999999999999999999999999864322 22233333334578999999999999888776
Q ss_pred ---CCCEEEEcccCCc---c----CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCc
Q 020608 77 ---GCTGVFHLASPCI---V----DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ---~~d~Vih~a~~~~---~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||... . ..+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+.
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 155 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS------- 155 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC-------
Confidence 7899999999732 1 1244567789999999977777765 34456799999998554211
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.++ |+++++++||.+++|...... .......+.++.+
T Consensus 156 -----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~--- 213 (253)
T 3qiv_A 156 -----------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKGLP--- 213 (253)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------
T ss_pred -----------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhccCC---
Confidence 349999999999999998885 899999999999998643211 1111122222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPSA--CGR-HLCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~ 253 (323)
...+.+++|+|++++.++..... .|+ |++.+
T Consensus 214 ---~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 214 ---LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp ---------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred ---CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 12256789999999999975432 344 66654
No 143
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.95 E-value=1.2e-26 Score=196.92 Aligned_cols=220 Identities=17% Similarity=0.107 Sum_probs=158.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+... ..+..+.+. .++.++.+|++|.++++++++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA--AQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999999999999986422 112222232 267889999999999888876
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++.. .+ .++||++||..+..+.+.
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 155 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL--------- 155 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC---------
Confidence 799999999975332 23456788999999999999998743 34 579999999866543321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCch---h-----HHHHHHHHcCC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNA---S-----MLMLLRLLQGC 215 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~---~-----~~~~~~~~~g~ 215 (323)
...|+.+|.+.+.+++.++.+. |++++++|||.+++|........ . ......+....
T Consensus 156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (263)
T 3ak4_A 156 ------------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT 223 (263)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC
Confidence 1349999999999999888764 89999999999999753210000 0 11111122221
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+ ...+++++|+|++++.++.... ..|+ +++.++
T Consensus 224 p------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 259 (263)
T 3ak4_A 224 P------LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259 (263)
T ss_dssp T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred C------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence 1 1237899999999999987542 2454 666543
No 144
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.95 E-value=1.5e-26 Score=195.78 Aligned_cols=214 Identities=16% Similarity=0.067 Sum_probs=153.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..+.. +.+... ++.++.+|++|.++++++++
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV--TELRQA-----GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH--HHHHHH-----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHhc-----CCeEEECCCCCHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999999875422 222222 47889999999999888775
Q ss_pred ---CCCEEEEcccCCccCC---CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 ---GCTGVFHLASPCIVDK---VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.++||++||..++.+....
T Consensus 96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------- 167 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH-------- 167 (260)
T ss_dssp HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC--------
T ss_pred hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc--------
Confidence 6899999999764332 223456799999999999999874 3456799999999776654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+++.++.++ ++++++++||.+.++..... ..........+ . .
T Consensus 168 -------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~p----~--~ 223 (260)
T 3gem_A 168 -------------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKSA----L--G 223 (260)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------CC----S--C
T ss_pred -------------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcCC----C--C
Confidence 349999999999999998775 59999999999998753211 11111111111 1 1
Q ss_pred CcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
.+..++|+|++++.+++.....|+ +++.+
T Consensus 224 r~~~~edva~~v~~L~~~~~itG~~i~vdG 253 (260)
T 3gem_A 224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNG 253 (260)
T ss_dssp CCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence 255789999999999976655666 56654
No 145
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.95 E-value=1e-26 Score=197.82 Aligned_cols=220 Identities=16% Similarity=0.120 Sum_probs=163.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|+||||||+|+||++++++|+++|++|+++.++. .....+..+.+.....++.++.+|++|.++++++++
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD-AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999998776543 222223334443345688999999999999888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh-----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK-----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 174 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ-------- 174 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC--------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC--------
Confidence 7899999999764322 445678899999999999999873 4456799999999777655321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.++..... ...........+.
T Consensus 175 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p~------ 231 (267)
T 4iiu_A 175 -------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIPM------ 231 (267)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCTT------
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCCC------
Confidence 349999999999888887764 89999999999999875432 1223333333221
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 232 ~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 232 KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 236789999999999997533 3455 555543
No 146
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.95 E-value=1.4e-26 Score=198.75 Aligned_cols=221 Identities=15% Similarity=0.108 Sum_probs=159.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+++|+||||||+|+||++++++|+++|++|+++.|+.++. ....+.+...+.++.++.+|++|.++++++++
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC--DSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH--HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH--HHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999988764222 22223333334578899999999999888764
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++. +.+.++||++||.+++++....
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------- 190 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ-------- 190 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC--------
Confidence 689999999976432 1344677899999999888888864 3456799999999776654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+. |++++++|||.+.++...... ...........+ .
T Consensus 191 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~----~-- 248 (285)
T 2c07_A 191 -------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQIKKNIISNIP----A-- 248 (285)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HHHHHHHHTTCT----T--
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HHHHHHHHhhCC----C--
Confidence 349999999999999888664 899999999999998643211 112222222211 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+++++|+|++++.++.... ..|+ +++.++
T Consensus 249 ~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG 282 (285)
T 2c07_A 249 GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282 (285)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence 237899999999999987543 2444 556543
No 147
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.95 E-value=5.5e-27 Score=197.58 Aligned_cols=211 Identities=15% Similarity=0.106 Sum_probs=148.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+.... ..+.+...+.++.++.+|++|.++++++++
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAP--LVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHH--HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999997644332 222333334578999999999999888776
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.++..+....
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 152 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF--------- 152 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC---------
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC---------
Confidence 679999999975432 244567889999999999999987 33445799999999776654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccE-EEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDV-VVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~-~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.||.+.+.+.+.++.+. |+++ ++++||.+.++....... ......... .+ .
T Consensus 153 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~---~~~~~~~~~----~~--~ 211 (252)
T 3h7a_A 153 ------------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE---QMFGKDALA----NP--D 211 (252)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch---hhhhhhhhc----CC--c
Confidence 349999999999999988774 8999 899999999876432110 011111000 11 1
Q ss_pred CCcccHHHHHHHHHHhhcCCCC
Q 020608 224 MGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
. +++++|+|++++.++..+..
T Consensus 212 ~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 212 L-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp ---CCHHHHHHHHHHHHHCCGG
T ss_pred c-CCCHHHHHHHHHHHHhCchh
Confidence 2 78999999999999986654
No 148
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.95 E-value=6.1e-27 Score=197.12 Aligned_cols=206 Identities=17% Similarity=0.167 Sum_probs=150.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++|+||||||+|+||++++++|+++| ++|++++|+..... .+..+ ...++.++.+|++|.++++++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~---~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH---HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH---HHHhc--cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999754332 22222 24578999999999999888776
Q ss_pred -----CCCEEEEcccCCc-cC----CCCCchhhhhhHHHHHHHHHHHHHhhC----------C-----cCEEEEeccccc
Q 020608 77 -----GCTGVFHLASPCI-VD----KVEDPQNQLLNPAVKGTVNVLTAAKAL----------G-----VKRVVVTSSISS 131 (323)
Q Consensus 77 -----~~d~Vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~SS~~~ 131 (323)
++|+|||+||... .. ...+.+...+++|+.++.++++++... + .++||++||..+
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 8999999999764 21 234456789999999999999987432 3 579999999966
Q ss_pred ccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHH
Q 020608 132 ITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLML 208 (323)
Q Consensus 132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~ 208 (323)
+.+... ++.+.. +...|+.+|.+.+.+++.++.++ |+++++++||.+.++....
T Consensus 156 ~~~~~~--------~~~~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------- 212 (250)
T 1yo6_A 156 SITDNT--------SGSAQF------PVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------- 212 (250)
T ss_dssp CSTTCC--------STTSSS------CBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred ccCCcc--------cccccC------CccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------
Confidence 654321 011101 11459999999999999998775 8999999999998875321
Q ss_pred HHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccEEE
Q 020608 209 LRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRHLC 251 (323)
Q Consensus 209 ~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 251 (323)
..+++++|+|++++.++.... ..|+|+.
T Consensus 213 ---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~ 242 (250)
T 1yo6_A 213 ---------------NAALTVEQSTAELISSFNKLDNSHNGRFFM 242 (250)
T ss_dssp ---------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred ---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence 125689999999999998754 3566654
No 149
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.95 E-value=7.6e-28 Score=209.04 Aligned_cols=227 Identities=16% Similarity=0.171 Sum_probs=160.0
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcH---HHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDE---RETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG 77 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (323)
|+ +||+|+|||||||||++++++|+++|++|+++.|+.+.. .....+..+. ..+++++.+|++|.+++.+++++
T Consensus 1 M~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 1 MG-SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp -C-CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHT
T ss_pred CC-CCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcC
Confidence 44 378999999999999999999999999999999986432 2222222222 24789999999999999999999
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhc
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCR 156 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 156 (323)
+|+|||+|+... +.++.+++++|++.+ +++||+ |+. .... +|..+..|.
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~---g~~~--------~~~~~~~p~--- 127 (308)
T 1qyc_A 78 VDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SEF---GNDV--------DNVHAVEPA--- 127 (308)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SCC---SSCT--------TSCCCCTTH---
T ss_pred CCEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-ccc---ccCc--------cccccCCcc---
Confidence 999999998521 345688999999988 999984 443 1111 122222221
Q ss_pred cCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHH
Q 020608 157 QNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVA 233 (323)
Q Consensus 157 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a 233 (323)
.+.| .+|..+|.+++ +.+++++++||+.++|+......... .....+.... . ++..++|+|++|+|
T Consensus 128 --~~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva 196 (308)
T 1qyc_A 128 --KSVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIG 196 (308)
T ss_dssp --HHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHH
T ss_pred --hhHH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHH
Confidence 1348 99999998875 35899999999999885432111000 0000111111 2 34456799999999
Q ss_pred HHHHHhhcCCCCCc-cEEE-E-cCccCHHHHHHHHHHHCCC
Q 020608 234 LAHILVYENPSACG-RHLC-V-EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 234 ~~~~~~~~~~~~~~-~~~~-~-~~~~~~~e~~~~i~~~~~~ 271 (323)
++++.+++++...+ .|++ + ++.+|+.|+++.+.+.+|.
T Consensus 197 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 237 (308)
T 1qyc_A 197 TFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK 237 (308)
T ss_dssp HHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred HHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence 99999998765433 4665 3 4689999999999999974
No 150
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.4e-26 Score=198.12 Aligned_cols=221 Identities=19% Similarity=0.172 Sum_probs=150.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.. ....+..+.+...+.++.++.+|++|.++++++++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDA-EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCH-HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35688999999999999999999999999999987532 22223333333335679999999999998888776
Q ss_pred -CCCEEEEcccCCcc------CCCCCchhhhhhHHHHHHHHHHHHHhhC----C---cCEEEEecccccccCCCCCCCCc
Q 020608 77 -GCTGVFHLASPCIV------DKVEDPQNQLLNPAVKGTVNVLTAAKAL----G---VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 -~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++... + .++||++||.+++.+....
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---- 181 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER---- 181 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC----
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc----
Confidence 78999999997321 1245677889999999999999987432 2 4599999999776554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.+|....... ........+.
T Consensus 182 -----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~---- 237 (280)
T 4da9_A 182 -----------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG---KYDGLIESGL---- 237 (280)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch---hHHHHHhhcC----
Confidence 34999999999999998877 58999999999999986432110 0011111100
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.....+.+++|+|++++.++.... ..|+ +++.+
T Consensus 238 -~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 273 (280)
T 4da9_A 238 -VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADG 273 (280)
T ss_dssp -----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEEST
T ss_pred -CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 011236789999999999997654 2455 55544
No 151
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.95 E-value=5.7e-27 Score=196.44 Aligned_cols=207 Identities=21% Similarity=0.144 Sum_probs=156.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------C
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------G 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~ 77 (323)
++|+||||||+|+||++++++|+++|++|++++|+.. . .++.++.+|++|.++++++++ +
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 66 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAP 66 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 3589999999999999999999999999999999763 1 245889999999999998887 7
Q ss_pred CCEEEEcccCCccCC----CCC----chhhhhhHHHHHHHHHHHHHhhC----C------cCEEEEecccccccCCCCCC
Q 020608 78 CTGVFHLASPCIVDK----VED----PQNQLLNPAVKGTVNVLTAAKAL----G------VKRVVVTSSISSITPSPKWP 139 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~----~~~----~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~SS~~~~~~~~~~~ 139 (323)
+|+|||+||...... ..+ ++...+++|+.++.++++++.+. + .++||++||.+++.+...
T Consensus 67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-- 144 (242)
T 1uay_A 67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-- 144 (242)
T ss_dssp EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT--
T ss_pred ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC--
Confidence 899999999754322 112 67889999999999999998542 1 239999999976654321
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
...|+.+|.+.+.+++.++.+. |++++++|||.+++|...... ......+..+.+
T Consensus 145 -------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~ 202 (242)
T 1uay_A 145 -------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVP 202 (242)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCC
T ss_pred -------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---hhHHHHHHhhCC
Confidence 1449999999999998887664 899999999999998643211 112223333322
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
. + ..+++++|+|++++.++......|+ +++.+
T Consensus 203 ~--~---~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 235 (242)
T 1uay_A 203 F--P---PRLGRPEEYAALVLHILENPMLNGEVVRLDG 235 (242)
T ss_dssp S--S---CSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred C--c---ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence 1 0 2378999999999999987544555 66654
No 152
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.95 E-value=6.1e-27 Score=198.45 Aligned_cols=222 Identities=17% Similarity=0.097 Sum_probs=160.7
Q ss_pred CCCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 2 SKEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
++++|++|||||+ |+||++++++|+++|++|++++|+.......+.+.. ....+.++.+|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE---ALGGALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHH---HTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH---hcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 4678899999999 999999999999999999999997531112222211 11247889999999999888776
Q ss_pred ----CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCc
Q 020608 77 ----GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++...- .++||++||.+++.+.+.
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----- 156 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK----- 156 (261)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-----
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC-----
Confidence 68999999997532 22455678899999999999999987651 259999999866554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+++|...... ........+....+.
T Consensus 157 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~-- 217 (261)
T 2wyu_A 157 ----------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPL-- 217 (261)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHSTT--
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCCC--
Confidence 1349999999999999988775 899999999999998643211 111222222222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 218 ----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 218 ----RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251 (261)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 226789999999999986432 2344 666543
No 153
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.95 E-value=1.2e-26 Score=198.48 Aligned_cols=222 Identities=18% Similarity=0.081 Sum_probs=161.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
++|++|||||+|+||++++++|+++|++|++++|+... ..+..+.+...+.++.++.+|++|.++++++++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN--VSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999987432 223333444445689999999999998887765
Q ss_pred CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh------CCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA------LGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++.. .+.++||++||.+++.+....
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-------- 172 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA-------- 172 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC--------
Confidence 689999999976432 23456778899999999999998754 345799999999776544321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC--------CchhHHHHHHHHcCC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT--------LNASMLMLLRLLQGC 215 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~g~ 215 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.+|..... ..........+....
T Consensus 173 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T 3sju_A 173 -------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI 239 (279)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC
Confidence 34999999999999999887 489999999999988742100 000111222222222
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+ ...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 240 p------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 240 P------LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275 (279)
T ss_dssp T------TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred C------CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 1 1236789999999999987643 3455 556543
No 154
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.95 E-value=1.8e-26 Score=198.33 Aligned_cols=225 Identities=16% Similarity=0.076 Sum_probs=159.3
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..... +..+.+...+.++.++.+|++|.++++++++
T Consensus 30 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 30 FSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVD--RGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIES 107 (291)
T ss_dssp GCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 3467789999999999999999999999999999998643221 2222332224578899999999999888776
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||..... ...+.+...+++|+.++.++++++. +.+.++||++||..+.++...
T Consensus 108 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~-------- 179 (291)
T 3cxt_A 108 EVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET-------- 179 (291)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------
T ss_pred HcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECccccccCCCC--------
Confidence 489999999975432 1345678899999999999988874 345679999999866654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchh--HH---HHHHHHcCCCC
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNAS--ML---MLLRLLQGCTD 217 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~--~~---~~~~~~~g~~~ 217 (323)
...|+.+|.+.+.+++.++.+ .|+++++++||.+.+|......... .. +........
T Consensus 180 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (291)
T 3cxt_A 180 -------------VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKT-- 244 (291)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHHC--
T ss_pred -------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCcCcchhhhccchhhhhhhhHHhhhhccC--
Confidence 134999999999999988766 3899999999999998643211000 00 110000011
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+. ..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 245 --p~--~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 280 (291)
T 3cxt_A 245 --PA--ARWGEAEDLMGPAVFLASDASNFVNGHILYVDGG 280 (291)
T ss_dssp --TT--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --CC--CCCCCHHHHHHHHHHHhCccccCCcCCeEEECCC
Confidence 11 137799999999999987542 2455 455443
No 155
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.95 E-value=2.9e-26 Score=196.79 Aligned_cols=221 Identities=11% Similarity=0.040 Sum_probs=159.0
Q ss_pred CCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|++|||||+ |+||++++++|+++|++|++++|+.... +..+.+.....++.++.+|++|.++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLE---KRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGH---HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999999 9999999999999999999999976311 1222221111246789999999999887765
Q ss_pred ---CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhCC---cCEEEEecccccccCCCCCCCCc
Q 020608 77 ---GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKALG---VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++...- .++||++||.+++.+.+..
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 171 (285)
T 2p91_A 96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY---- 171 (285)
T ss_dssp HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT----
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc----
Confidence 68999999997542 22445678899999999999999986542 3699999998665543211
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+++|...... ........+....+.
T Consensus 172 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~-- 231 (285)
T 2p91_A 172 -----------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVNPF-- 231 (285)
T ss_dssp -----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHSTT--
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcCCC--
Confidence 349999999999999888764 899999999999998654221 111222222222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 232 ----~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg 265 (285)
T 2p91_A 232 ----GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265 (285)
T ss_dssp ----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ----CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 126789999999999986432 2455 556543
No 156
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.95 E-value=1.1e-26 Score=195.40 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=152.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|++.. ...+.+.. .+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP-EAEAAIRN---LGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchh-HHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999997621 11112222 23478899999999998887754
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 150 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---------- 150 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC----------
Confidence 789999999975432 234567789999999998888884 4455679999999966654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.+.++......... ........ ..+ ..
T Consensus 151 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~--~~~--~~ 212 (249)
T 2ew8_A 151 -----------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLPNM--LQA--IP 212 (249)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CT--TSS--SC
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc---hhhHHHHh--hCc--cC
Confidence 1349999999999999988764 899999999999998643110000 00000100 011 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++.... ..|+ +++.++
T Consensus 213 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG 245 (249)
T 2ew8_A 213 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245 (249)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred CCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence 37899999999999987532 3455 455443
No 157
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.95 E-value=4.1e-26 Score=192.06 Aligned_cols=217 Identities=18% Similarity=0.107 Sum_probs=153.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---CCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---GCT 79 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 79 (323)
.++|+||||||+|+||++++++|+++|++|++++|+.+... +..+.+ ..++.++.+|+++.+++.++++ ++|
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLK--SLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999999643222 222222 2378899999999999998887 689
Q ss_pred EEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCCCC
Q 020608 80 GVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTD 151 (323)
Q Consensus 80 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~ 151 (323)
+|||+||..... ...+++...+++|+.++.++++++. +.+.++||++||..++.+....
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------- 153 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ------------- 153 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS-------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC-------------
Confidence 999999976432 2556788999999999999998873 3445799999999766544321
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCccc
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVH 228 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~ 228 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++....... .....+..+. ....+.+
T Consensus 154 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~------~~~~~~~ 216 (249)
T 3f9i_A 154 --------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE---KQREAIVQKI------PLGTYGI 216 (249)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH---HHHHHHHHHC------TTCSCBC
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH---HHHHHHHhcC------CCCCCcC
Confidence 34999999999999988876 48999999999999986543221 1122222222 1133778
Q ss_pred HHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 229 FKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 229 v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
++|+|++++.++..... .|+ +++.++
T Consensus 217 ~~dva~~~~~l~s~~~~~~tG~~~~vdgG 245 (249)
T 3f9i_A 217 PEDVAYAVAFLASNNASYITGQTLHVNGG 245 (249)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 99999999999975432 355 666544
No 158
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.95 E-value=7.9e-27 Score=201.25 Aligned_cols=236 Identities=13% Similarity=0.094 Sum_probs=163.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCC---CeEEEEccCCCHhHHHHHhc-
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADT---RLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+. ++.++.+|++|.++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE--ETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 3467789999999999999999999999999999999753222 22222222222 68899999999999888765
Q ss_pred ------CCCEEEEcccCCccC------CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCC-CCCC
Q 020608 77 ------GCTGVFHLASPCIVD------KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPS-PKWP 139 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~-~~~~ 139 (323)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+ ++||++||..++.+. +.
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~-- 176 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG-- 176 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT--
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC--
Confidence 789999999975321 13456788999999999999998743 34 799999998655433 11
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCC-chh-----HHHHHH
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTL-NAS-----MLMLLR 210 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~-~~~-----~~~~~~ 210 (323)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+.+|...... ... ......
T Consensus 177 -------------------~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 237 (297)
T 1xhl_A 177 -------------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS 237 (297)
T ss_dssp -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH
Confidence 134999999999999988865 5899999999999998532110 000 011111
Q ss_pred HHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC---CCCcc-EEEEcC-ccCHHHHHHHHH
Q 020608 211 LLQGCTDTYENFFMGSVHFKDVALAHILVYENP---SACGR-HLCVEA-ISHYGDFVAKVA 266 (323)
Q Consensus 211 ~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~-~~~~~~-~~~~~e~~~~i~ 266 (323)
.... .+. ..+.+++|+|++++.++... ...|+ +++.++ .....+.++.+.
T Consensus 238 ~~~~----~p~--~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~ 292 (297)
T 1xhl_A 238 RKEC----IPV--GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLM 292 (297)
T ss_dssp CTTT----CTT--SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHH
T ss_pred HHhc----CCC--CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchh
Confidence 1111 111 23789999999999998754 33455 556433 344444444333
No 159
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3.4e-26 Score=195.26 Aligned_cols=221 Identities=15% Similarity=0.085 Sum_probs=158.7
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+.. .+..+.+...+ ++.++.+|++|.++++++++
T Consensus 25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~--~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEAC--ADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 456778999999999999999999999999999998864322 22223333222 68889999999998887765
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCc----CEEEEecccccccCCCCCCCC
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGV----KRVVVTSSISSITPSPKWPAD 141 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~----~~~v~~SS~~~~~~~~~~~~~ 141 (323)
++|+||||||..... ...+.+...+++|+.++.++++++. +.+. ++||++||.+++.+.+...
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~-- 179 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA-- 179 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC--
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc--
Confidence 689999999975432 2445678899999999998888863 3333 7999999996665432210
Q ss_pred ccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHc--CCC
Q 020608 142 KVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQ--GCT 216 (323)
Q Consensus 142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~--g~~ 216 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++..... .......... ..+
T Consensus 180 ------------------~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~p 238 (276)
T 2b4q_A 180 ------------------YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADSASIP 238 (276)
T ss_dssp ------------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHHHTST
T ss_pred ------------------cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhhcCCC
Confidence 14999999999999998876 489999999999998853210 0001111111 111
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 239 ------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 239 ------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG 272 (276)
T ss_dssp ------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 1237799999999999987542 3455 44543
No 160
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.95 E-value=3.2e-26 Score=192.39 Aligned_cols=220 Identities=16% Similarity=0.134 Sum_probs=158.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
|++|++|||||+|+||++++++|+++|++|+++.|+. .....+..+.+...+.++.++.+|++|.++++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN-EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999998832 111112222332224578899999999999888776
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.++||++||.+++++.+..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 151 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ--------- 151 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTB---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCC---------
Confidence 789999999975332 2345678899999999888777753 3456799999999776654311
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+.+.++.+ +|+++++++||.+.+|........ .........+ ..
T Consensus 152 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~p------~~ 210 (246)
T 2uvd_A 152 ------------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN---IKAEMLKLIP------AA 210 (246)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT---HHHHHHHTCT------TC
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH---HHHHHHhcCC------CC
Confidence 34999999999998888765 489999999999999864321111 1112222211 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+++++|+|++++.++.... ..|+ +++.+
T Consensus 211 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 211 QFGEAQDIANAVTFFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence 37899999999999987532 2455 45544
No 161
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.95 E-value=7e-27 Score=197.51 Aligned_cols=219 Identities=15% Similarity=0.089 Sum_probs=157.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+. . +..+.+. . .++.+|++|.++++++++
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~--~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~ 73 (256)
T 2d1y_A 2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K--EVAEAIG----G-AFFQVDLEDERERVRFVEEAAY 73 (256)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H--HHHHHHT----C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H--HHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998654 2 2222221 3 788999999998887765
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||.+++.+.+.
T Consensus 74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------- 145 (256)
T 2d1y_A 74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE-------- 145 (256)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC--------
Confidence 6899999999764322 234567899999999999999874 345679999999966654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCCCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~~ 219 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.++...... .........+...
T Consensus 146 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----- 207 (256)
T 2d1y_A 146 -------------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDL----- 207 (256)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTT-----
T ss_pred -------------ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhc-----
Confidence 1349999999999999988764 899999999999886321000 0000000011111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.....+++++|+|++++.++.... ..|+ +++.++
T Consensus 208 -~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG 244 (256)
T 2d1y_A 208 -HALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG 244 (256)
T ss_dssp -STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 112347899999999999987542 2454 666543
No 162
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.95 E-value=9.4e-27 Score=197.80 Aligned_cols=221 Identities=14% Similarity=0.057 Sum_probs=159.8
Q ss_pred CCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|++|||||+ |+||++++++|+++|++|++++|+.......+.+... .....++.+|++|.++++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHH
Confidence 456899999999 9999999999999999999999976222222222111 1234788999999999888776
Q ss_pred ---CCCEEEEcccCCcc--------C-CCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCc
Q 020608 77 ---GCTGVFHLASPCIV--------D-KVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+|||+||.... . .+.+.+...+++|+.++.++++++...- .++||++||.+++.+.+..
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 159 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY---- 159 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCc----
Confidence 67999999997542 1 3445678899999999999999987642 2599999998666543221
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+++|...... ........+..+.+.
T Consensus 160 -----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~-- 219 (265)
T 1qsg_A 160 -----------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTPI-- 219 (265)
T ss_dssp -----------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT--
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCCC--
Confidence 349999999999999988774 899999999999998643211 111222222222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 220 ----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 220 ----RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253 (265)
T ss_dssp ----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence 236789999999999987533 2354 566543
No 163
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.4e-26 Score=196.00 Aligned_cols=226 Identities=17% Similarity=0.110 Sum_probs=157.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|+++.++... ...+..+.+...+.++.++.+|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAE-GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCH-HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999998655432 2223334444445678999999999999888776
Q ss_pred --CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccc-cCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSI-TPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~-~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++...- .+++|++||..++ .+...
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 154 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG--------- 154 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT---------
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC---------
Confidence 689999999865221 1344568899999999999999987653 2499999998665 22221
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.||.+.+.+++.++.+. ++++++++||.+.++....... .......... ....
T Consensus 155 ------------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p~~ 214 (259)
T 3edm_A 155 ------------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGA------TSLK 214 (259)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhc------CCCC
Confidence 1349999999999999998775 3999999999999886432110 0011111111 1112
Q ss_pred CcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcCccC
Q 020608 225 GSVHFKDVALAHILVYENPSA--CGR-HLCVEAISH 257 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~~~~ 257 (323)
.+.+++|+|++++.++..... .|+ +++.|+...
T Consensus 215 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~ 250 (259)
T 3edm_A 215 REGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF 250 (259)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence 367899999999999875432 455 667655443
No 164
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.95 E-value=2.8e-26 Score=194.67 Aligned_cols=207 Identities=19% Similarity=0.212 Sum_probs=155.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+ .++.+. ..++.++.+|++|.++++++++
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE------RLKALN--LPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH------HHHTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHhh--cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 45789999999999999999999999999999998632 122222 2368899999999998888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~--------- 156 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH--------- 156 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC---------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC---------
Confidence 7899999999764322 345567889999999999888763 4456799999999776544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhH-HHHHHHHcCCCCCccCcC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASM-LMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.||.+.+.+.+.++.+ +|+++++++||.|.++.......... ........ ..
T Consensus 157 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~ 216 (266)
T 3p19_A 157 ------------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV--------DM 216 (266)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH--------HT
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc--------cc
Confidence 34999999999999998877 48999999999999986433221111 11111000 11
Q ss_pred CCcccHHHHHHHHHHhhcCCCCC
Q 020608 224 MGSVHFKDVALAHILVYENPSAC 246 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~~ 246 (323)
..+++++|+|++++.++..+...
T Consensus 217 ~r~~~pedvA~av~~l~~~~~~~ 239 (266)
T 3p19_A 217 GGVLAADDVARAVLFAYQQPQNV 239 (266)
T ss_dssp TCCBCHHHHHHHHHHHHHSCTTE
T ss_pred cCCCCHHHHHHHHHHHHcCCCCc
Confidence 22678999999999999987653
No 165
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.95 E-value=4e-26 Score=195.07 Aligned_cols=219 Identities=16% Similarity=0.130 Sum_probs=157.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEec-CCCcHHHHHHHhhccCC-CCCeEEEEccCCCH----hHHHHHhc
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVK-NLSDERETAHLKALEGA-DTRLRLFQIDLLDY----DAIAAAVT 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~~~~~~~ 76 (323)
|++|++|||||+|+||++++++|+++|++|++++| +.+.. .+..+.+... +.++.++.+|++|. ++++++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA--QRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH--HHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 45689999999999999999999999999999998 53221 1222222211 34788999999999 88887765
Q ss_pred -------CCCEEEEcccCCccCC----CC-----------CchhhhhhHHHHHHHHHHHHHhhC---Cc------CEEEE
Q 020608 77 -------GCTGVFHLASPCIVDK----VE-----------DPQNQLLNPAVKGTVNVLTAAKAL---GV------KRVVV 125 (323)
Q Consensus 77 -------~~d~Vih~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~---~~------~~~v~ 125 (323)
++|+||||||...... .. +.+...+++|+.++.++++++... +. ++||+
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~ 166 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN 166 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence 7899999999754321 22 566789999999999999998763 33 79999
Q ss_pred ecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCc
Q 020608 126 TSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLN 202 (323)
Q Consensus 126 ~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~ 202 (323)
+||.+++.+.... ..|+.+|.+.+.+++.++.+. |+++++++||.+++| .. ..
T Consensus 167 isS~~~~~~~~~~---------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~~ 222 (276)
T 1mxh_A 167 LCDAMTDLPLPGF---------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--MP 222 (276)
T ss_dssp ECCGGGGSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--SC
T ss_pred ECchhhcCCCCCC---------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--CC
Confidence 9999766543211 349999999999999988764 899999999999999 21 11
Q ss_pred hhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 203 ASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 203 ~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
......+....+ .+ +.+++++|+|++++.++.... ..|+ +++.++
T Consensus 223 --~~~~~~~~~~~p----~~-r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 270 (276)
T 1mxh_A 223 --QETQEEYRRKVP----LG-QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270 (276)
T ss_dssp --HHHHHHHHTTCT----TT-SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --HHHHHHHHhcCC----CC-CCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence 122223322221 11 127899999999999987533 2455 556543
No 166
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.95 E-value=2.1e-27 Score=207.19 Aligned_cols=218 Identities=15% Similarity=0.093 Sum_probs=156.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC-cHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS-DERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+++||||||||+||++++++|+++|++|+++.|+++ .......+. ..+++++.+|++|.+++.++++++|+|||
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~-----~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ-----SLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh-----cCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 458999999999999999999999999999999875 222111111 13688999999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCch
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWY 162 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y 162 (323)
+|+... +.++.+++++|++.+ +++||+ |+. ... .+|..+..|. .+.|
T Consensus 86 ~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~---g~~--------~~~~~~~~p~-----~~~y 133 (318)
T 2r6j_A 86 ALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SDF---GVE--------EDRINALPPF-----EALI 133 (318)
T ss_dssp CCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SCC---SSC--------TTTCCCCHHH-----HHHH
T ss_pred CCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ecc---ccC--------cccccCCCCc-----chhH
Confidence 997521 346789999999988 999985 432 111 1222222221 1348
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHHHHHHHh
Q 020608 163 PLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVALAHILV 239 (323)
Q Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a~~~~~~ 239 (323)
.+|..+|.+++ +.+++++++||+.+++.. ...+......+.... . ++...+++|++|+|+++..+
T Consensus 134 -~sK~~~e~~~~----~~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 201 (318)
T 2r6j_A 134 -ERKRMIRRAIE----EANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV 201 (318)
T ss_dssp -HHHHHHHHHHH----HTTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHH
T ss_pred -HHHHHHHHHHH----hcCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHH
Confidence 99999998874 468999999998887631 111111111222221 2 33456699999999999999
Q ss_pred hcCCCCC-ccEEE-E-cCccCHHHHHHHHHHHCCC
Q 020608 240 YENPSAC-GRHLC-V-EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 240 ~~~~~~~-~~~~~-~-~~~~~~~e~~~~i~~~~~~ 271 (323)
+.++... +.+++ + ++.+|+.|+++.+.+.+|.
T Consensus 202 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 236 (318)
T 2r6j_A 202 ATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK 236 (318)
T ss_dssp TTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred hcCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence 9876543 34555 3 4789999999999998864
No 167
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.95 E-value=1.1e-26 Score=198.32 Aligned_cols=222 Identities=17% Similarity=0.151 Sum_probs=160.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +....+ +.++.++.+|++|.++++++++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV--RVANEI---GSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5667899999999999999999999999999999998743222 222222 3478899999999999888776
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||..++.+....
T Consensus 98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 170 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR------- 170 (277)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTB-------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCC-------
Confidence 7899999999764322 34567788999999999999887 34455699999999666543321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCC---CchhHHHHHHHHcCCCCCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPT---LNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.++ |+++++++||.+.+|..... ...............+
T Consensus 171 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--- 233 (277)
T 4dqx_A 171 --------------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV--- 233 (277)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST---
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc---
Confidence 349999999999999988774 89999999999988741100 0001111111222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 234 ---~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 268 (277)
T 4dqx_A 234 ---MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG 268 (277)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ---ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence 1236789999999999997543 2455 556543
No 168
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.95 E-value=9.6e-27 Score=200.19 Aligned_cols=222 Identities=15% Similarity=0.138 Sum_probs=162.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.... .....+.+...+.++.++.+|++|.++++++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD-ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999975321 112222233345688999999999998887765
Q ss_pred -CCCEEEEcccCCccCC-----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 -GCTGVFHLASPCIVDK-----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... ..++||++||..++.+....
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------- 193 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL---------- 193 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC----------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC----------
Confidence 7899999999753221 45567889999999999999998664 23599999999777654321
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.|++|....... ......+..+. ....
T Consensus 194 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~------p~~r 254 (291)
T 3ijr_A 194 -----------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD--EKKVSQFGSNV------PMQR 254 (291)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC--HHHHHHTTTTS------TTSS
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC--HHHHHHHHccC------CCCC
Confidence 349999999999999988775 8999999999999985211000 11111111111 1223
Q ss_pred cccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 226 SVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+.+++|+|++++.++.... ..|+ +++.++
T Consensus 255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 286 (291)
T 3ijr_A 255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNGG 286 (291)
T ss_dssp CBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence 6789999999999997543 3455 555443
No 169
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.95 E-value=1.5e-26 Score=197.25 Aligned_cols=221 Identities=19% Similarity=0.150 Sum_probs=153.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
++|+||||||+|+||++++++|+++|++|+++.++. ..........+...+.++.++.+|++|.++++++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN-REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999998874432 222222223333334578999999999998887765
Q ss_pred CCCEEEEcccCCccCC-----CCCchhhhhhHHHHHHHHHHHHHhhC-------CcCEEEEecccccccCCCCCCCCccc
Q 020608 77 GCTGVFHLASPCIVDK-----VEDPQNQLLNPAVKGTVNVLTAAKAL-------GVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... +.++||++||.+++.+....
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------ 177 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ------ 177 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC------
Confidence 6899999999764311 44567889999999999999987432 34689999999777654310
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.++++...... .......+..+.
T Consensus 178 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~------ 235 (272)
T 4e3z_A 178 --------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG--LPDRAREMAPSV------ 235 (272)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC------
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC--ChHHHHHHhhcC------
Confidence 0349999999999999988775 899999999999998643211 111111111111
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
....+.+++|+|++++.++.... ..|+ +++.+
T Consensus 236 ~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 236 PMQRAGMPEEVADAILYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CcCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence 11236789999999999997533 2344 66654
No 170
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.95 E-value=2e-26 Score=195.34 Aligned_cols=223 Identities=15% Similarity=0.088 Sum_probs=158.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+. .....+..+.+...+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK-EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999832 111112222232224568899999999998888776
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++.. .+ .++||++||..+..+...
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 154 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------- 154 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC---------
Confidence 789999999975432 23456778999999999999888643 34 579999999865543221
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
...|+.+|.+.+.+++.++.+. +++++++|||.+++|..... .........+....+ .
T Consensus 155 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~ 215 (261)
T 1gee_A 155 ------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIP------M 215 (261)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCT------T
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc-ccChhHHHHHHhcCC------C
Confidence 1459999999999998887664 89999999999999863210 000111222222211 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+++++|+|++++.++.... ..|+ +++.++
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 249 (261)
T 1gee_A 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence 237899999999999987432 2454 556543
No 171
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.95 E-value=1.5e-27 Score=194.49 Aligned_cols=186 Identities=14% Similarity=0.079 Sum_probs=145.4
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC---CCEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG---CTGVF 82 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~Vi 82 (323)
|+||||||+|+||++++++|+ +|++|++++|+.. ++.+|++|.+++++++++ +|+||
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~vi 63 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAIV 63 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence 479999999999999999999 9999999998752 368999999999988875 89999
Q ss_pred EcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCCCCCChhhh
Q 020608 83 HLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC 155 (323)
Q Consensus 83 h~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 155 (323)
|+||...... +.+.+...+++|+.++.++++++.+. + ++||++||..++.+...
T Consensus 64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~------------------ 124 (202)
T 3d7l_A 64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ------------------ 124 (202)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc------------------
Confidence 9999653321 23455678899999999999998765 3 69999999855443221
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHH
Q 020608 156 RQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVA 233 (323)
Q Consensus 156 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a 233 (323)
...|+.+|.+.|.+++.++.+. |++++++|||.++++... ...+ .....+++++|+|
T Consensus 125 ---~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------~~~~------~~~~~~~~~~dva 183 (202)
T 3d7l_A 125 ---GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------LEPF------FEGFLPVPAAKVA 183 (202)
T ss_dssp ---CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------HGGG------STTCCCBCHHHHH
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------hhhh------ccccCCCCHHHHH
Confidence 1449999999999999988764 899999999999997421 1111 1234589999999
Q ss_pred HHHHHhhcCCCCCccEEE
Q 020608 234 LAHILVYENPSACGRHLC 251 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~ 251 (323)
++++.++.....+..|++
T Consensus 184 ~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 184 RAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp HHHHHHHHSCCCSCEEEE
T ss_pred HHHHHhhhccccCceEec
Confidence 999988854433334664
No 172
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.95 E-value=1.7e-26 Score=196.87 Aligned_cols=222 Identities=16% Similarity=0.082 Sum_probs=160.3
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|+||||||+|+||++++++|+++|++|+++.|+..+. .....+.+...+.++.++.+|++|.+++.++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEV-ADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999964222 112222233334578999999999998888775
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++.. .+.+++|++||..+..+....
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 176 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ------- 176 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-------
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc-------
Confidence 7899999999764322 3456788999999999999888743 355799999999776654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+++.++.+ .++++++++||.+.++...... ......... ...
T Consensus 177 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~------~~~ 233 (271)
T 4iin_A 177 --------------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DELKADYVK------NIP 233 (271)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGG------GCT
T ss_pred --------------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HHHHHHHHh------cCC
Confidence 34999999999999998877 5899999999999988643211 000111111 111
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 234 ~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG 267 (271)
T 4iin_A 234 LNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG 267 (271)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence 2237799999999999997543 3455 55544
No 173
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.95 E-value=2.5e-26 Score=193.03 Aligned_cols=211 Identities=15% Similarity=0.062 Sum_probs=155.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
|+|++|||||+|+||++++++|+++|++|++++|+.... .+.... ..+..++.+|++|.++++++++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 74 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS--ADFAKE----RPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHTT----CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHh----cccCCeEEeeCCCHHHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999864221 122222 2467789999999999888775
Q ss_pred CCCEEEEcccCCcc----CCCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 77 GCTGVFHLASPCIV----DKVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 77 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++... +.+++|++||.+++.+.+..
T Consensus 75 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 143 (247)
T 3dii_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS----------- 143 (247)
T ss_dssp CCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCc-----------
Confidence 78999999997543 2244667889999999999999997542 23699999999776554321
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcc
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSV 227 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 227 (323)
..|+.||.+.+.+++.++.+. .++++++.||.+.++....... ......+ . ..+.
T Consensus 144 ----------~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~-------~~~~~~p----~--~r~~ 200 (247)
T 3dii_A 144 ----------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQ-------EDCAAIP----A--GKVG 200 (247)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCH-------HHHHTST----T--SSCB
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcchhhHHH-------HHHhcCC----C--CCCc
Confidence 349999999999999998875 4899999999999886432211 1111111 1 2266
Q ss_pred cHHHHHHHHHHhhcCCCCCcc-EEEEcC
Q 020608 228 HFKDVALAHILVYENPSACGR-HLCVEA 254 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~~~~-~~~~~~ 254 (323)
+++|+|++++.++......|+ +++.++
T Consensus 201 ~p~dva~~v~~l~~~~~itG~~i~vdGG 228 (247)
T 3dii_A 201 TPKDISNMVLFLCQQDFITGETIIVDGG 228 (247)
T ss_dssp CHHHHHHHHHHHHTCSSCCSCEEEESTT
T ss_pred CHHHHHHHHHHHHcCCCCCCcEEEECCC
Confidence 899999999999966555666 455443
No 174
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.95 E-value=7.3e-27 Score=198.72 Aligned_cols=220 Identities=18% Similarity=0.123 Sum_probs=161.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+..... +....+...+.++.++.+|++|.++++++++
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE--GIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999998643222 2222232224578899999999998888766
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 174 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ--------- 174 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc---------
Confidence 7899999999764322 445678899999999999999874 2345699999999777654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++...... ...........+ ..
T Consensus 175 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p------~~ 233 (270)
T 3ftp_A 175 ------------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP---QEQQTALKTQIP------LG 233 (270)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC---HHHHHHHHTTCT------TC
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC---HHHHHHHHhcCC------CC
Confidence 34999999999999998877 4899999999999987432111 111222222221 12
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+.+++|+|++++.++.... ..|+ +++.++
T Consensus 234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 266 (270)
T 3ftp_A 234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266 (270)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence 36799999999999986433 3455 566543
No 175
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.95 E-value=8.6e-27 Score=197.83 Aligned_cols=222 Identities=16% Similarity=0.135 Sum_probs=161.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+.. .+..+++...+.++.++.+|++|.++++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL--EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999964322 22333333335678999999999999888765
Q ss_pred -CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++.. .+ ++||++||..+..+....
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-------- 157 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY-------- 157 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC--------
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc--------
Confidence 68999999987422 124466788999999999999998743 23 699999999766554321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCc--------hhHHHHHHHHcCC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLN--------ASMLMLLRLLQGC 215 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~g~ 215 (323)
..|+.+|.+.+.+++.++.+ +|+++++++||.+++|....... ...........+.
T Consensus 158 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (264)
T 3ucx_A 158 -------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS 224 (264)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC
Confidence 34999999999999998877 58999999999999975321000 0011112222221
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
....+.+++|+|++++.++.... ..|+ +++.++
T Consensus 225 ------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 225 ------DLKRLPTEDEVASAILFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp ------SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ------CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 11237799999999999987533 3455 556543
No 176
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.95 E-value=4.2e-26 Score=191.45 Aligned_cols=200 Identities=15% Similarity=0.100 Sum_probs=153.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-------EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-------TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
+|+||||||+|+||++++++|+++|+ +|++++|+..... .....+...+.++.++.+|++|.++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE--KISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH--HHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHH--HHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 58999999999999999999999999 9999998643222 2222333334578899999999998888776
Q ss_pred ------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCc
Q 020608 77 ------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++. +.+.++||++||.+++.+...
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----- 154 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH----- 154 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC-----
Confidence 689999999975332 2345678899999999999999974 345679999999966554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
...|+.+|.+.+.+++.++.+ +|++++++|||.+++|....... ..
T Consensus 155 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~--- 203 (244)
T 2bd0_A 155 ----------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------EM--- 203 (244)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------TT---
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------cc---
Confidence 144999999999999887754 58999999999999986532110 00
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCCC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
...+++++|+|++++.++..+..
T Consensus 204 ---~~~~~~~~dva~~~~~l~~~~~~ 226 (244)
T 2bd0_A 204 ---QALMMMPEDIAAPVVQAYLQPSR 226 (244)
T ss_dssp ---GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred ---cccCCCHHHHHHHHHHHHhCCcc
Confidence 12478999999999999986543
No 177
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.95 E-value=2.8e-26 Score=195.11 Aligned_cols=223 Identities=16% Similarity=0.115 Sum_probs=157.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC--CCCeEEEEccCCCHhHHHHHhc---
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA--DTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... +.++.++.+|++|.++++++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE--ASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 357799999999999999999999999999999999753222 222222111 3478899999999999888776
Q ss_pred ----CCCEEEEcccCCcc-C----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ----GCTGVFHLASPCIV-D----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||.... . .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 161 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN------ 161 (267)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC------
Confidence 68999999997533 1 134567889999999998777765 3445689999999966554321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC-----CchhHHHHHHHHcCC
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT-----LNASMLMLLRLLQGC 215 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~-----~~~~~~~~~~~~~g~ 215 (323)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+++|..... ..........+....
T Consensus 162 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (267)
T 1iy8_A 162 ---------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN 226 (267)
T ss_dssp ---------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred ---------------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC
Confidence 134999999999999988776 489999999999998742110 000000011222111
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
+ ...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 227 ----p--~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG 261 (267)
T 1iy8_A 227 ----P--SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG 261 (267)
T ss_dssp ----T--TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ----C--CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 1 1236799999999999987542 3455 45543
No 178
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.95 E-value=2.3e-26 Score=194.70 Aligned_cols=210 Identities=18% Similarity=0.179 Sum_probs=151.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+.. .+..+.+...+.++.++.+|++|.++++++++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI--EAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999999874322 22333333334578899999999998887765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~--------- 150 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA--------- 150 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC---------
Confidence 7899999999764322 445678899999999999988873 3455799999999776654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCc
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGS 226 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 226 (323)
..|+.||.+.+.+.+.++.+. |+++++++||.+.++......... .. . ........+
T Consensus 151 ------------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~--~~-~-------~~~~~~~~~ 208 (264)
T 3tfo_A 151 ------------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE--TM-A-------AMDTYRAIA 208 (264)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------C
T ss_pred ------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh--HH-H-------HHHhhhccC
Confidence 349999999999999998876 999999999999987543211000 00 0 000001114
Q ss_pred ccHHHHHHHHHHhhcCCCC
Q 020608 227 VHFKDVALAHILVYENPSA 245 (323)
Q Consensus 227 i~v~D~a~~~~~~~~~~~~ 245 (323)
+.++|+|++++.++..+..
T Consensus 209 ~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 209 LQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp CCHHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHhcCCcc
Confidence 6899999999999987765
No 179
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.95 E-value=1.5e-26 Score=196.27 Aligned_cols=218 Identities=13% Similarity=0.093 Sum_probs=155.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+..... +..+.+ +.++.++.+|++|.++++++++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK--EIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998643222 222222 3478999999999999888775
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+....
T Consensus 99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-------- 170 (266)
T 3grp_A 99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ-------- 170 (266)
T ss_dssp HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CH--------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCc--------
Confidence 789999999976432 134567889999999977777775 34456799999998766554321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.+|...... ......+....+ .
T Consensus 171 -------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p------~ 228 (266)
T 3grp_A 171 -------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---EKQKEAIMAMIP------M 228 (266)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---HHHHHHHHTTCT------T
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---HHHHHHHHhcCC------C
Confidence 349999999999999888764 899999999999987533211 112223333222 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|.+++.++.... ..|+ +++.++
T Consensus 229 ~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3grp_A 229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262 (266)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 236789999999999987543 2455 555443
No 180
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.95 E-value=4.9e-27 Score=199.91 Aligned_cols=223 Identities=11% Similarity=0.070 Sum_probs=162.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+++...+.++.++.+|++|.++++++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR--VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH--HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999886432 223333343335678999999999999888776
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+.++||++||..+..+....
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-------- 172 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV-------- 172 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC--------
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc--------
Confidence 689999999975432 24556788999999999999888643 345799999998766554321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+ +|+++++++||.+.++...... .............+ .
T Consensus 173 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~ 232 (271)
T 4ibo_A 173 -------------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTP------A 232 (271)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHST------T
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCC------C
Confidence 34999999999999998877 4899999999999998532100 00111222222221 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|.+++.++.... ..|+ +++.++
T Consensus 233 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 266 (271)
T 4ibo_A 233 KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG 266 (271)
T ss_dssp CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence 236689999999999987533 3455 556543
No 181
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.95 E-value=1.1e-26 Score=194.89 Aligned_cols=218 Identities=17% Similarity=0.109 Sum_probs=157.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEE-ecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-VKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
+|+||||||+|+||++++++|+++|++|+++ .|+..... ...+.+...+.++.++.+|++|.++++++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE--EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999999999985 56532221 2222222223468889999999999888776
Q ss_pred CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++.+ .+.++||++||.+++++....
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------- 148 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ---------- 148 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC----------
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCC----------
Confidence 689999999975432 23456778999999999999998754 356799999999776654321
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
..|+.+|.+.+.+++.++.+ .|++++++|||.+++|...... ...........+ ...
T Consensus 149 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~------~~~ 208 (244)
T 1edo_A 149 -----------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---EDMEKKILGTIP------LGR 208 (244)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---HHHHHHHHTSCT------TCS
T ss_pred -----------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC---hHHHHHHhhcCC------CCC
Confidence 34999999999999888776 4899999999999998533211 112222222211 123
Q ss_pred cccHHHHHHHHHHhhcCCC---CCcc-EEEEcC
Q 020608 226 SVHFKDVALAHILVYENPS---ACGR-HLCVEA 254 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~~ 254 (323)
+++++|+|++++.++..+. ..|+ +++.+.
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 7899999999999984332 2344 566543
No 182
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.95 E-value=9.5e-27 Score=197.78 Aligned_cols=229 Identities=18% Similarity=0.166 Sum_probs=162.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALE-GADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+..+.... .+.+. ..+.++.++.+|++|.++++++++
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV--TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH--HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHH--HHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999976443221 12221 113478899999999998887765
Q ss_pred ----CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEecccccccCCCCCCCCcc
Q 020608 77 ----GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++... + .++||++||..++.+....
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----- 162 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----- 162 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-----
Confidence 489999999975432 134566788999999999999997432 2 3799999998665543210
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
..+ ..+...|+.+|.+.+.+++.++.+. |++++++|||.++++...... ...........+
T Consensus 163 ---~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~---- 226 (265)
T 1h5q_A 163 ---LNG------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KKIRDHQASNIP---- 226 (265)
T ss_dssp ---TTE------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCT----
T ss_pred ---ccc------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hhHHHHHHhcCc----
Confidence 000 0112559999999999999988763 899999999999998643221 111222222221
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 227 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 227 --LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp --TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred --ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence 1237799999999999987542 2344 667554
No 183
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.95 E-value=3.7e-27 Score=204.60 Aligned_cols=225 Identities=14% Similarity=0.101 Sum_probs=157.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC-c--H-HHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS-D--E-RETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~--~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
+||+|+|||||||||++++++|+++|++|+++.|+++ . . ...+.+..+. ..+++++.+|++|.+++.++++++|
T Consensus 1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d 78 (307)
T 2gas_A 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVD 78 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCC
Confidence 3689999999999999999999999999999999861 1 1 2222222221 1368899999999999999999999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
+|||+|+... +.++.+++++|++.+ +++||+ |+. .... +|..+..|.
T Consensus 79 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~---g~~~--------~~~~~~~p~----- 126 (307)
T 2gas_A 79 IVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SEF---GLDV--------DRHDAVEPV----- 126 (307)
T ss_dssp EEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SCC---SSCT--------TSCCCCTTH-----
T ss_pred EEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-ccc---ccCc--------ccccCCCcc-----
Confidence 9999998631 346788999999988 999983 432 1111 122222221
Q ss_pred CCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-c--cCcCCCcccHHHHHHH
Q 020608 159 EIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-Y--ENFFMGSVHFKDVALA 235 (323)
Q Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~v~D~a~~ 235 (323)
.+.| .+|..+|.+++ +.+++++++||+.++++........ ......+.... . ++..++++|++|+|++
T Consensus 127 ~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (307)
T 2gas_A 127 RQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADVGTF 197 (307)
T ss_dssp HHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred hhHH-HHHHHHHHHHH----HcCCCeEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence 1349 99999998875 4589999999999988642211000 00000111111 2 3345669999999999
Q ss_pred HHHhhcCCCCCc-cEEE-E-cCccCHHHHHHHHHHHCCC
Q 020608 236 HILVYENPSACG-RHLC-V-EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 236 ~~~~~~~~~~~~-~~~~-~-~~~~~~~e~~~~i~~~~~~ 271 (323)
++.++.++...+ .+++ + ++.+|+.|+++.+.+.+|.
T Consensus 198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 236 (307)
T 2gas_A 198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK 236 (307)
T ss_dssp HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence 999998765434 3554 4 4689999999999998864
No 184
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.95 E-value=2.6e-26 Score=191.70 Aligned_cols=201 Identities=16% Similarity=0.092 Sum_probs=136.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|+||+||||||||+||++++++|+++| ++|+++.|+++... .+ ...+++++.+|++|.++++++++++|+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH------KP--YPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC------SS--CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc------cc--ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 567899999999999999999999999 89999999753211 11 1247899999999999999999999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
||+|+.... ...+.++++++++.++++||++||.+++...... .....+..+..
T Consensus 93 v~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~--~~~~~~~~~~~---------- 146 (236)
T 3qvo_A 93 YANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK--FVEWNNAVIGE---------- 146 (236)
T ss_dssp EEECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC------------------CG----------
T ss_pred EEcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcc--cccchhhcccc----------
Confidence 999975211 2357789999999999999999999665443211 11222222211
Q ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhc
Q 020608 162 YPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYE 241 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~ 241 (323)
+...+..+|..+ +..+++++++|||.++++...... ....+. .....+++++|+|++++.++.
T Consensus 147 ~~~~~~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~~--------~~~~~~-----~~~~~~i~~~DvA~~i~~ll~ 209 (236)
T 3qvo_A 147 PLKPFRRAADAI----EASGLEYTILRPAWLTDEDIIDYE--------LTSRNE-----PFKGTIVSRKSVAALITDIID 209 (236)
T ss_dssp GGHHHHHHHHHH----HTSCSEEEEEEECEEECCSCCCCE--------EECTTS-----CCSCSEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH----HHCCCCEEEEeCCcccCCCCcceE--------EeccCC-----CCCCcEECHHHHHHHHHHHHc
Confidence 233344444444 367999999999999997532110 000111 011247999999999999998
Q ss_pred CCC--CCccEEEEcC
Q 020608 242 NPS--ACGRHLCVEA 254 (323)
Q Consensus 242 ~~~--~~~~~~~~~~ 254 (323)
++. .+..|++++.
T Consensus 210 ~~~~~~g~~~~i~~~ 224 (236)
T 3qvo_A 210 KPEKHIGENIGINQP 224 (236)
T ss_dssp STTTTTTEEEEEECS
T ss_pred CcccccCeeEEecCC
Confidence 776 3344777643
No 185
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.95 E-value=4.8e-26 Score=193.55 Aligned_cols=229 Identities=14% Similarity=0.116 Sum_probs=160.1
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC--CCCCeEEEEccCCCHhHHHHHhc--
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG--ADTRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
|.+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+++.. ....+.++.+|+++.++++++++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVN--ETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY 83 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence 3456789999999999999999999999999999998753322 22222221 13467889999999999888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... ..+.+...+++|+.++.++++++ ++.+.+++|++||..++.+....
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 154 (267)
T 3t4x_A 84 PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM--------- 154 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC---------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc---------
Confidence 7899999999764322 34567788999999988887775 34566799999999766544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCC--------CCchhHHHHHHHHcCCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPP--------TLNASMLMLLRLLQGCT 216 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~g~~ 216 (323)
..|+.||.+.+.+.+.++.+. |+++++++||.+.+|.... .................
T Consensus 155 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (267)
T 3t4x_A 155 ------------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR 222 (267)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC
Confidence 449999999999999998775 7999999999998863110 00000111111111110
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+ ...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 223 ~~~~--~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 223 PTSI--IQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp TTCS--SCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred Cccc--ccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 0001 1237899999999999987532 3455 566543
No 186
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.95 E-value=2.6e-26 Score=194.13 Aligned_cols=216 Identities=19% Similarity=0.142 Sum_probs=156.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+. ... .+.+ ..++.++.+|++|.++++++++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~~---~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--EDV---VADL---GDRARFAAADVTDEAAVASALDLAET 76 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--HHH---HHHT---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--HHH---HHhc---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 667889999999999999999999999999999999853 211 1122 3478999999999999888776
Q ss_pred --CCCEEEEcccCCccC--------CCCCchhhhhhHHHHHHHHHHHHHhh------------CCcCEEEEecccccccC
Q 020608 77 --GCTGVFHLASPCIVD--------KVEDPQNQLLNPAVKGTVNVLTAAKA------------LGVKRVVVTSSISSITP 134 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~------------~~~~~~v~~SS~~~~~~ 134 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+.+++|++||.+++.+
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence 789999999975321 34566789999999999999999753 23459999999966543
Q ss_pred CCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHH
Q 020608 135 SPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRL 211 (323)
Q Consensus 135 ~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~ 211 (323)
... ...|+.||.+.+.+++.++.+ .|+++++++||.|.+|...... .......
T Consensus 157 ~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~ 212 (257)
T 3tl3_A 157 QIG---------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP---EEARASL 212 (257)
T ss_dssp HHH---------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C---HHHHHHH
T ss_pred CCC---------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc---HHHHHHH
Confidence 321 134999999999999988876 4899999999999998654321 1122222
Q ss_pred HcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 212 LQGCTDTYENFFMGSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 212 ~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
....+. ...+.+++|+|++++.+++.+...|+ +++.+
T Consensus 213 ~~~~~~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tl3_A 213 GKQVPH-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDG 250 (257)
T ss_dssp HHTSSS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HhcCCC-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence 222211 02367899999999999987666676 44543
No 187
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.95 E-value=5e-27 Score=202.27 Aligned_cols=224 Identities=18% Similarity=0.129 Sum_probs=160.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+++|++|||||+|+||++++++|+++|++|+++.|+..........+.+...+.++.++.+|++|.++++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999888643222222222233334578999999999998887765
Q ss_pred --CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhCCc--CEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKALGV--KRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++...-. ++||++||..++.+....
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------- 196 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL--------- 196 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC---------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc---------
Confidence 789999999975321 24566788999999999999999866532 499999999766544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.++ |+++++++||.|++|......... .....+.. .....
T Consensus 197 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~------~~p~~ 257 (294)
T 3r3s_A 197 ------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-DKIPQFGQ------QTPMK 257 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG-GGSTTTTT------TSTTS
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH-HHHHHHHh------cCCCC
Confidence 349999999999999988775 899999999999987421100000 00000000 11112
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+.+++|+|++++.++.... ..|+ +++.+
T Consensus 258 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 289 (294)
T 3r3s_A 258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 36789999999999987543 2454 56654
No 188
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.95 E-value=7.1e-27 Score=203.49 Aligned_cols=241 Identities=16% Similarity=0.106 Sum_probs=156.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC--CCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG--ADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.++... ....+.. ...++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDK--ALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHH--HHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999997543222 2222221 12378999999999999888775
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC----------CcCEEEEecccccccCCCCCC
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL----------GVKRVVVTSSISSITPSPKWP 139 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~~~~~ 139 (323)
++|+|||+||...... +.+.+...+++|+.|+.++++++... +.++||++||.+++.+.+..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~- 162 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP- 162 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS-
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC-
Confidence 6799999999754322 34567889999999999999987432 24689999999776654321
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
..|+.||.+.+.+++.++.+ .|+++++++||.|.+|.......... .+........
T Consensus 163 --------------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~ 221 (319)
T 3ioy_A 163 --------------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPD-ALKGEVKPVD 221 (319)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCch-hhcccccchh
Confidence 34999999777777776655 48999999999999986432211110 0000000000
Q ss_pred ---CC-ccCcCCCcccHHHHHHHHHHhhcCCCCCccEEEEcCc--cCHHHHHHHHHHHCC
Q 020608 217 ---DT-YENFFMGSVHFKDVALAHILVYENPSACGRHLCVEAI--SHYGDFVAKVAELYP 270 (323)
Q Consensus 217 ---~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~i~~~~~ 270 (323)
.. ........++++|+|++++.+++++. .+.+++.. -.+++....+...++
T Consensus 222 ~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~ 278 (319)
T 3ioy_A 222 KTAVERLAGVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ 278 (319)
T ss_dssp -------CCGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence 00 01111113799999999999998753 24443322 133444444444443
No 189
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.7e-26 Score=194.38 Aligned_cols=223 Identities=16% Similarity=0.107 Sum_probs=157.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +....+ +.++.++.+|++|.++++++++
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD--AAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999998643222 222233 3478899999999998887765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+.++||++||..+..+....
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------- 172 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT--------- 172 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc---------
Confidence 789999999986432 24456788999999999999998743 455799999999766544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccCcC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YENFF 223 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+ +|+++++++||.+++|.......... .......... .....
T Consensus 173 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 237 (277)
T 3gvc_A 173 ------------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFD---GALGAGGARSMIARLQ 237 (277)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHH
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcch---hhHHHHhhhhhhhccc
Confidence 34999999999999988876 58999999999999874210000000 0000000000 00001
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 238 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 271 (277)
T 3gvc_A 238 GRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271 (277)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence 236789999999999997543 3455 556543
No 190
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.95 E-value=2.5e-27 Score=207.00 Aligned_cols=222 Identities=15% Similarity=0.150 Sum_probs=158.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC-Cc--HHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL-SD--ERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+||+|+|||||||||++++++|+++|++|+++.|++ +. ....+.+..+. ..+++++.+|++|.+++.++++++|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCE
Confidence 578999999999999999999999999999999986 21 12222222221 13689999999999999999999999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCC
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNE 159 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 159 (323)
|||+|+... +.++.+++++|++.+ +++||+ |+. +.. .+|+.+..|. .
T Consensus 81 vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~~-------~~~~~~~~p~-----~ 128 (321)
T 3c1o_A 81 VISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SDF----GCE-------EDRIKPLPPF-----E 128 (321)
T ss_dssp EEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SCC----SSC-------GGGCCCCHHH-----H
T ss_pred EEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-ccc----ccC-------ccccccCCCc-----c
Confidence 999998531 456788999999988 999983 332 111 1222222221 1
Q ss_pred CchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHH---HHHcCCCCC-c--cCcCCCcccHHHHH
Q 020608 160 IWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLL---RLLQGCTDT-Y--ENFFMGSVHFKDVA 233 (323)
Q Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~---~~~~g~~~~-~--~~~~~~~i~v~D~a 233 (323)
+.| .+|..+|.+++ +.+++++++||+.++++.. ..+.. ....+.... . ++..++++|++|+|
T Consensus 129 ~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 196 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIA 196 (321)
T ss_dssp HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHH
T ss_pred hHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHH
Confidence 459 99999998885 4589999999999887521 01110 001122221 2 34456699999999
Q ss_pred HHHHHhhcCCCCCcc-EEEE--cCccCHHHHHHHHHHHCCC
Q 020608 234 LAHILVYENPSACGR-HLCV--EAISHYGDFVAKVAELYPE 271 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~-~~~~--~~~~~~~e~~~~i~~~~~~ 271 (323)
+++..++.++...+. |++. ++.+|+.|+++.+.+.+|.
T Consensus 197 ~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 197 KYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237 (321)
T ss_dssp HHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence 999999987654344 6653 4789999999999998864
No 191
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.95 E-value=2.3e-26 Score=196.92 Aligned_cols=223 Identities=17% Similarity=0.136 Sum_probs=158.5
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+.......... +...+.++.++.+|++|.++++++++
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHL--QKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHH--HHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987654332221 11113468899999999998888775
Q ss_pred ---CCCEEEEcccCCcc------CCCCCchhhhhhHHHHHH----HHHHHHHhhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ---GCTGVFHLASPCIV------DKVEDPQNQLLNPAVKGT----VNVLTAAKALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||.... ....+.+...+++|+.++ +.++..+++.+.++||++||.+++.+...
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------ 181 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP------ 181 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC------
Confidence 48999999997543 112345677899999994 56666666666789999999865443100
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
. ....|+.+|.+.|.+++.++.++ + ++++++||.+.++...... ......+....+
T Consensus 182 -------~------~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~p---- 240 (279)
T 3ctm_A 182 -------Q------LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS---KDMKAKWWQLTP---- 240 (279)
T ss_dssp -------C------CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC---HHHHHHHHHHST----
T ss_pred -------C------CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC---hHHHHHHHHhCC----
Confidence 0 01459999999999999998774 6 9999999999998653211 111222211111
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 241 --~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG 275 (279)
T 3ctm_A 241 --LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275 (279)
T ss_dssp --TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 1237799999999999997532 3444 556543
No 192
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.95 E-value=2.7e-25 Score=190.88 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=162.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC-------------cHHHH-HHHhhccCCCCCeEEEEccCCCH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS-------------DERET-AHLKALEGADTRLRLFQIDLLDY 68 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~ 68 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.. ..+.. +..+.+...+.++.++.+|++|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 56799999999999999999999999999999998732 12222 22333444456899999999999
Q ss_pred hHHHHHhc-------CCCEEEEcccCCccCC-----CCCchhhhhhHHHHHHHHHHHHHhhC----C-cCEEEEeccccc
Q 020608 69 DAIAAAVT-------GCTGVFHLASPCIVDK-----VEDPQNQLLNPAVKGTVNVLTAAKAL----G-VKRVVVTSSISS 131 (323)
Q Consensus 69 ~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~ 131 (323)
++++++++ ++|+||||||...... +.+.+...+++|+.++.++++++... + .++||++||..+
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 99888765 7899999999754322 45667889999999999999987432 2 469999999977
Q ss_pred ccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCc------
Q 020608 132 ITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLN------ 202 (323)
Q Consensus 132 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~------ 202 (323)
+.+.... ..|+.||.+.+.+.+.++.+ +|+++++++||.+.+|.......
T Consensus 169 ~~~~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 227 (286)
T 3uve_A 169 LKAYPHT---------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP 227 (286)
T ss_dssp TSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred ccCCCCc---------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence 6554321 34999999999999998877 48999999999999986532100
Q ss_pred ----hhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 203 ----ASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 203 ----~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
............. ...+ ..+.+++|+|.+++.++.... ..|+ +++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~-~~~p---~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 281 (286)
T 3uve_A 228 DLENPGPDDMAPICQMF-HTLP---IPWVEPIDISNAVLFFASDEARYITGVTLPIDA 281 (286)
T ss_dssp TSSSCCHHHHHHHHHTT-CSSS---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cccccchhhHHHHHHhh-hccC---CCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence 0000000100000 0011 347899999999999997543 3455 55544
No 193
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.95 E-value=3.1e-26 Score=194.07 Aligned_cols=224 Identities=15% Similarity=0.089 Sum_probs=156.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+. ...+..+.+... +.++.++.+|++|.++++++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA-EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH-HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch-HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999987532 011222222211 3468889999999999888775
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... ...+.+...+++|+.++.++++++. +.+.++||++||.+++.+...
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 151 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN--------- 151 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC---------
Confidence 689999999975422 2445678899999999999999874 345679999999966654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchh--------HHHHHHH-HcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNAS--------MLMLLRL-LQG 214 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~--------~~~~~~~-~~g 214 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.+|......... ......+ ...
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T 1x1t_A 152 ------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK 219 (260)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc
Confidence 1349999999999999888764 899999999999998643211000 0000000 000
Q ss_pred CCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 215 CTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 215 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+ ...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 220 ----~p--~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 220 ----QP--SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp ----CT--TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CC--CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 01 1237899999999999987532 3455 555443
No 194
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.94 E-value=3.4e-26 Score=192.77 Aligned_cols=221 Identities=18% Similarity=0.155 Sum_probs=157.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+.. ..+++++.+|++|.+++.++++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE--KAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999743222 22222222 1478999999999998887766
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCc-CEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGV-KRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++ ++.+. ++||++||..++.+...
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 151 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-------- 151 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--------
Confidence 4899999999754321 33456789999999888777665 44555 79999999966654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHH-----hCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAK-----EKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
...|+.+|.+.+.+++.++. ..+++++++|||.+++|...... .. ...... ... .+
T Consensus 152 -------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~-~~~~~~-~~~--~~ 212 (251)
T 1zk4_A 152 -------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP--GA-EEAMSQ-RTK--TP 212 (251)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST--TH-HHHHTS-TTT--CT
T ss_pred -------------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC--ch-hhhHHH-hhc--CC
Confidence 13499999999999988775 35899999999999998543211 01 111101 110 11
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+++++|+|++++.++.... ..|+ +++.++
T Consensus 213 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 247 (251)
T 1zk4_A 213 --MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 1237899999999999997542 2354 566543
No 195
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.94 E-value=2.6e-26 Score=195.02 Aligned_cols=226 Identities=19% Similarity=0.101 Sum_probs=159.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC--CCCCeEEEEccCCCHhHHHHHhc--
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG--ADTRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.. ...++.++.+|++|.++++++++
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLR--AAESALRQRFPGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998753322 22222221 12358999999999998887765
Q ss_pred -----CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 -----GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 -----~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++. +.+.++||++||..+..+....
T Consensus 82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----- 156 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM----- 156 (265)
T ss_dssp HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB-----
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc-----
Confidence 689999999975432 2445678899999999999999973 3445699999999766544321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC------c-hhHHHHHHHHc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL------N-ASMLMLLRLLQ 213 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~------~-~~~~~~~~~~~ 213 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.+|...... . ....+......
T Consensus 157 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T 3lf2_A 157 ----------------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLAR 220 (265)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHH
T ss_pred ----------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhh
Confidence 349999999999999988774 899999999999987421000 0 00111111111
Q ss_pred CCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 214 GCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 214 g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.... + ...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 221 ~~~~--p--~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 259 (265)
T 3lf2_A 221 NKQI--P--LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG 259 (265)
T ss_dssp HTTC--T--TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred ccCC--C--cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence 1101 1 1226789999999999997533 3455 44543
No 196
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.94 E-value=4.5e-26 Score=193.96 Aligned_cols=209 Identities=15% Similarity=0.121 Sum_probs=147.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+.. .+....+ ..++.++.+|++|.++++++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL--QETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4568899999999999999999999999999999874322 2222233 2478899999999999888776
Q ss_pred -CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhh----CC--cCEEEEecccccccCCCCCCCCccc
Q 020608 77 -GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG--VKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ .++||++||.+++.+....
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~------ 174 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS------ 174 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc------
Confidence 789999999975331 24556788999999999999888633 32 3699999999766544321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.|.+|........ ..... ...
T Consensus 175 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~------~~~ 229 (272)
T 4dyv_A 175 ---------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQAD------LSI 229 (272)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chhhh------hcc
Confidence 44999999999999998877 489999999999998854321100 00000 001
Q ss_pred cCCCcccHHHHHHHHHHhhcCCCCCc
Q 020608 222 FFMGSVHFKDVALAHILVYENPSACG 247 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~~~~ 247 (323)
....+++++|+|++++.++..+....
T Consensus 230 ~~~~~~~pedvA~~v~fL~s~~~~~~ 255 (272)
T 4dyv_A 230 KVEPVMDVAHVASAVVYMASLPLDAN 255 (272)
T ss_dssp ------CHHHHHHHHHHHHHSCTTSC
T ss_pred cccCCCCHHHHHHHHHHHhCCCCcCc
Confidence 11237799999999999999766543
No 197
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.94 E-value=1.7e-26 Score=199.63 Aligned_cols=217 Identities=17% Similarity=0.135 Sum_probs=154.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.+.. .+..+.+...+.++.++.+|++|.++++++++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL--EQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999999999975332 22233333335578999999999999888765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ .++||++||..++.+....
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 178 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-------- 178 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB--------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc--------
Confidence 789999999976432 24556788999999999999999733 33 4699999999776554321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC-ccC-
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT-YEN- 221 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~- 221 (323)
..|+.||.+.+.+++.++.+. |+++++++||.+.++...... ............+.. ++.
T Consensus 179 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 243 (301)
T 3tjr_A 179 -------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE--RIRGADYGMSATPEGAFGPL 243 (301)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH--HHC-----------------
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc--cccchhhccccChhhhcccc
Confidence 349999999999999888764 899999999999887421100 000000000000100 111
Q ss_pred -cCCCcccHHHHHHHHHHhhcCCC
Q 020608 222 -FFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 222 -~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
....+++++|+|++++.+++.+.
T Consensus 244 ~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 244 PTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp -----CCCHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCHHHHHHHHHHHHhcCC
Confidence 12348899999999999998653
No 198
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.94 E-value=1.5e-25 Score=193.46 Aligned_cols=225 Identities=18% Similarity=0.123 Sum_probs=162.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC----------cHHHHHHHhhccCCCCCeEEEEccCCCHhHHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS----------DERETAHLKALEGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
+++|++|||||+|+||++++++|+++|++|++++|++. .....+....+...+.++.++.+|++|.++++
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 56789999999999999999999999999999998732 12222333333334568899999999999988
Q ss_pred HHhc-------CCCEEEEcccCCccCC-----CCCchhhhhhHHHHHHHHHHHHHhh----C-CcCEEEEecccccccCC
Q 020608 73 AAVT-------GCTGVFHLASPCIVDK-----VEDPQNQLLNPAVKGTVNVLTAAKA----L-GVKRVVVTSSISSITPS 135 (323)
Q Consensus 73 ~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~~~~~~ 135 (323)
++++ ++|+||||||...... +.+.+...+++|+.++.++++++.. . +.++||++||.+++.+.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 8765 7899999999764322 4456788999999999999998743 2 25699999999776554
Q ss_pred CCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCc----------
Q 020608 136 PKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLN---------- 202 (323)
Q Consensus 136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~---------- 202 (323)
... ..|+.||.+.+.+++.++.+. |+++++++||.|.+|.......
T Consensus 186 ~~~---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 244 (299)
T 3t7c_A 186 ENI---------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN 244 (299)
T ss_dssp TTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred CCc---------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence 321 349999999999999988775 8999999999999986532100
Q ss_pred hhHHHHHHH-HcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 203 ASMLMLLRL-LQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 203 ~~~~~~~~~-~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
......... .... ..+ ..+.+++|+|++++.++.... ..|+ +++.+
T Consensus 245 ~~~~~~~~~~~~~~--~~p---~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 245 PTVEDFQVASRQMH--VLP---IPYVEPADISNAILFLVSDDARYITGVSLPVDG 294 (299)
T ss_dssp CCHHHHHHHHHHHS--SSS---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred chhhHHHHHhhhhc--ccC---cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence 000000000 0000 011 236789999999999997543 3455 55544
No 199
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.94 E-value=3.2e-26 Score=189.25 Aligned_cols=194 Identities=14% Similarity=0.108 Sum_probs=140.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHH-HCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLL-ERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+|||+||||||||+||++++++|+ ++|++|+++.|++.. ..+.+. ....+++++.+|++|.+++.++++++|+|
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~--~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT--RIPPEI---IDHERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHH--HSCHHH---HTSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccc--cchhhc---cCCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 345679999999999999999999 899999999997420 111111 11357899999999999999999999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
||+|+.. |+. ++++++++++.++++||++||.+++...+. ...+. ......+.
T Consensus 78 v~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-----~~~~~------~~~~~~~~ 130 (221)
T 3r6d_A 78 FVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-----ALEKW------TFDNLPIS 130 (221)
T ss_dssp EESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-----HHHHH------HHHTSCHH
T ss_pred EEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-----ccccc------cccccccH
Confidence 9999852 444 899999999999999999999965543221 11000 00011125
Q ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhh-
Q 020608 162 YPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVY- 240 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~- 240 (323)
|+.+|..+|.+++ +.+++++++|||.++++........ .... . .....+++.+|+|++++.++
T Consensus 131 y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~-~---~~~~~~~~~~dvA~~~~~l~~ 194 (221)
T 3r6d_A 131 YVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYEL--------IPEG-A---QFNDAQVSREAVVKAIFDILH 194 (221)
T ss_dssp HHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEE--------ECTT-S---CCCCCEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceee--------ccCC-c---cCCCceeeHHHHHHHHHHHHH
Confidence 9999999998874 5799999999999999832211100 0000 0 01123799999999999999
Q ss_pred -cCCC
Q 020608 241 -ENPS 244 (323)
Q Consensus 241 -~~~~ 244 (323)
.++.
T Consensus 195 ~~~~~ 199 (221)
T 3r6d_A 195 AADET 199 (221)
T ss_dssp CSCCG
T ss_pred hcChh
Confidence 7654
No 200
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.94 E-value=2.1e-25 Score=187.16 Aligned_cols=215 Identities=17% Similarity=0.122 Sum_probs=157.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.++.. +..+.+ ++.++.+|++|.++++++++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~ 73 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR--EAAEAV-----GAHPVVMDVADPASVERGFAEALA 73 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHTT-----TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHc-----CCEEEEecCCCHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999999998642211 112222 37889999999998887765
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+.++||++||.+ .++....
T Consensus 74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~------- 145 (245)
T 1uls_A 74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQ------- 145 (245)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTC-------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCc-------
Confidence 589999999975322 13456778999999999999988743 3567999999985 5543211
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|...+.+.+.++.+ .|+++++++||.+.++...... ...........+ .
T Consensus 146 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p----~- 203 (245)
T 1uls_A 146 --------------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---EKVREKAIAATP----L- 203 (245)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---HHHHHHHHHTCT----T-
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---HHHHHHHHhhCC----C-
Confidence 34999999999998888766 4899999999999998643211 112222222211 1
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+++++|+|++++.++.... ..|+ +.+.+
T Consensus 204 -~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 236 (245)
T 1uls_A 204 -GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG 236 (245)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 126799999999999987532 3455 44544
No 201
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.94 E-value=4.1e-26 Score=194.85 Aligned_cols=223 Identities=20% Similarity=0.151 Sum_probs=158.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHH-CCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLE-RRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|+||||||+|+||++++++|++ .|++|++++|+.+... ...+.+...+.++.++.+|++|.++++++++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ--AAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHH--HHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999 9999999999743222 2222332224578899999999999888776
Q ss_pred --CCCEEEEcccCCccCCC----CCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCC-------C
Q 020608 77 --GCTGVFHLASPCIVDKV----EDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPA-------D 141 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~-------~ 141 (323)
++|+|||+||....... .+.+...+++|+.++.++++++.... .++||++||..++++.....+ .
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 159 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccc
Confidence 78999999997643221 24567889999999999999997652 249999999877643110000 0
Q ss_pred ccccCCCCCC-------------hhhhccCCCchHHHHHHHHHHHHHHHHh-------CCccEEEEcCCCccCCCCCCCC
Q 020608 142 KVKDEDCWTD-------------EEYCRQNEIWYPLSKTLAEKAAWEFAKE-------KGLDVVVVNPGTVMGPVIPPTL 201 (323)
Q Consensus 142 ~~~~e~~~~~-------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~~~Rp~~v~G~~~~~~~ 201 (323)
..++|+++.. ......+.+.|+.+|.+.+.+++.++.+ .++++++++||.|.++....
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-- 237 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-- 237 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT--
T ss_pred cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc--
Confidence 0111211000 0000012256999999999999888766 58999999999999876431
Q ss_pred chhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC----CCccEEE
Q 020608 202 NASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS----ACGRHLC 251 (323)
Q Consensus 202 ~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~ 251 (323)
..+.+++|+|++++.++..+. ..|+|..
T Consensus 238 ----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 238 ----------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp ----------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ----------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 125789999999999997542 3555543
No 202
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.94 E-value=5.1e-26 Score=194.79 Aligned_cols=223 Identities=15% Similarity=0.131 Sum_probs=159.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCC---CeEEEEccCCCHhHHHHHhc--
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADT---RLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
.+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+. ++.++.+|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE--ETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 367899999999999999999999999999999999753222 22223322223 68899999999998887765
Q ss_pred -----CCCEEEEcccCCccC--------CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCC-CCC
Q 020608 77 -----GCTGVFHLASPCIVD--------KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPS-PKW 138 (323)
Q Consensus 77 -----~~d~Vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~-~~~ 138 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ ++||++||..++.+. ..
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~- 158 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD- 158 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS-
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc-
Confidence 689999999975321 13345788999999999999999753 34 799999998665433 11
Q ss_pred CCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCC-chh-----HHHHH
Q 020608 139 PADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTL-NAS-----MLMLL 209 (323)
Q Consensus 139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~-~~~-----~~~~~ 209 (323)
...|+.+|.+.+.+++.++.+ +|+++++++||.+++|...... ... .....
T Consensus 159 --------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 218 (280)
T 1xkq_A 159 --------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA 218 (280)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHH
Confidence 134999999999999988765 5899999999999998532110 000 01111
Q ss_pred HHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC---CCCcc-EEEEcC
Q 020608 210 RLLQGCTDTYENFFMGSVHFKDVALAHILVYENP---SACGR-HLCVEA 254 (323)
Q Consensus 210 ~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~-~~~~~~ 254 (323)
..... .+ ...+.+++|+|++++.++... ...|+ +++.++
T Consensus 219 ~~~~~----~p--~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 219 SHKEC----IP--IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp HCTTT----CT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHcC----CC--CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 11111 11 123789999999999998754 23455 555443
No 203
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.94 E-value=1.6e-25 Score=188.97 Aligned_cols=216 Identities=16% Similarity=0.094 Sum_probs=155.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+.+ +.++.++.+|++|.++++++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE--GAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999986422 11222222 2368889999999999888776
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 147 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL--------- 147 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC---------
Confidence 799999999975431 234567889999999998666554 4555689999999966654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC-CCCccC-
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC-TDTYEN- 221 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~~~- 221 (323)
...|+.+|.+.+.+.+.++.+ .|++++++|||.+++|... ...... ......
T Consensus 148 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~ 204 (254)
T 1hdc_A 148 ------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------ETGIRQGEGNYPNT 204 (254)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------HHTCCCSTTSCTTS
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-----------ccchhHHHHHHhcC
Confidence 134999999999999988876 4899999999999987421 000000 000010
Q ss_pred cCCCcc-cHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 222 FFMGSV-HFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i-~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
....+. +++|+|++++.++.... ..|+ +++.+.
T Consensus 205 p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 241 (254)
T 1hdc_A 205 PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 112267 99999999999987542 3455 455443
No 204
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.94 E-value=1.2e-25 Score=188.81 Aligned_cols=210 Identities=20% Similarity=0.215 Sum_probs=154.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+++...+.++.++.+|++|.++++++++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR--ALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999743222 2222332224578899999999998887765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+ ++||++||.++..+.+.
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~---------- 151 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN---------- 151 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC----------
Confidence 7899999999753321 3345778899999999999998743 34 79999999866554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......... ........ + +++
T Consensus 152 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~----~-~~~ 212 (247)
T 2jah_A 152 -----------AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA---TKEMYEQR----I-SQI 212 (247)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH---HHHHHHHH----T-TTS
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh---hHHHHHhc----c-ccc
Confidence 134999999999998888766 4899999999999998533211111 11111111 1 112
Q ss_pred CcccHHHHHHHHHHhhcCCC
Q 020608 225 GSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~ 244 (323)
.+++++|+|++++.++..+.
T Consensus 213 ~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 213 RKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp CCBCHHHHHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHhCCCc
Confidence 25799999999999998653
No 205
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.94 E-value=5.2e-26 Score=191.05 Aligned_cols=219 Identities=18% Similarity=0.166 Sum_probs=160.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.. .+....+ +.++.++.+|++|.++++++++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGA--KAAAASI---GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999998864322 2222233 3478899999999999888776
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCC-cCEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALG-VKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+ .+++|++||..++.+.+..
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 150 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM------- 150 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC-------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc-------
Confidence 7899999999764322 44567889999999999999984 4444 5799999999776654321
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+.+.++.+ +|+++++++||.+.++................. . .
T Consensus 151 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~------~ 208 (247)
T 3rwb_A 151 --------------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--Q------A 208 (247)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--S------S
T ss_pred --------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--c------c
Confidence 34999999999999998877 589999999999998743221111111111100 1 0
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|+++..++.... ..|+ +++.++
T Consensus 209 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 243 (247)
T 3rwb_A 209 MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243 (247)
T ss_dssp SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 1225689999999999997543 2455 455443
No 206
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.94 E-value=6.1e-26 Score=192.41 Aligned_cols=203 Identities=22% Similarity=0.163 Sum_probs=149.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.+++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR--AVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999999999999999753322 2223333334578999999999999887765
Q ss_pred -CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++. +.+.++||++||.+++.+....
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 176 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG-------- 176 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC--------
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC--------
Confidence 58999999997321 12445678899999999999999863 3456799999999665543321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++...... .. ...
T Consensus 177 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~------~~~ 226 (262)
T 3rkr_A 177 -------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-----------AK------KSA 226 (262)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------
T ss_pred -------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-----------cc------ccc
Confidence 44999999999999988876 4899999999999887532110 00 011
Q ss_pred CCcccHHHHHHHHHHhhcCCCC
Q 020608 224 MGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
..+++++|+|++++.++.....
T Consensus 227 ~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 227 LGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp --CCCHHHHHHHHHHHHTCCTT
T ss_pred ccCCCHHHHHHHHHHHhcCccc
Confidence 2367899999999999986543
No 207
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.94 E-value=4.1e-26 Score=195.68 Aligned_cols=226 Identities=17% Similarity=0.086 Sum_probs=160.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.... .....+.+...+.++.++.+|++|.++++++++
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES-AEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999875321 112222222224578899999999998877654
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++... +.++||++||..+..+...
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 173 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP---------- 173 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC----------
Confidence 689999999975432 134567889999999999999998765 4579999999865543221
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC-------C-chhHHHHHHHHc--C
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT-------L-NASMLMLLRLLQ--G 214 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~-------~-~~~~~~~~~~~~--g 214 (323)
....|+.+|.+.+.+++.++.+ +|+++++++||.+.++..... . .........+.. .
T Consensus 174 ----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T 1g0o_A 174 ----------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW 243 (283)
T ss_dssp ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcC
Confidence 0145999999999999988866 489999999999998742100 0 000111122221 1
Q ss_pred CCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 215 CTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 215 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+ ...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 244 ~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 244 SP------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CC------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 11 1236799999999999997543 3455 44543
No 208
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.94 E-value=6.3e-26 Score=192.29 Aligned_cols=221 Identities=15% Similarity=0.134 Sum_probs=152.0
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..... +...++ ..++.++.+|++|.++++++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE--RVAGEI---GDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 6778899999999999999999999999999999999753222 222222 3478999999999999888776
Q ss_pred ---CCCEEEEcccCCccCC-----CCCchhhhhhHHHHHHHHHHHHHhhC----C----cCEEEEecccccccCCCCCCC
Q 020608 77 ---GCTGVFHLASPCIVDK-----VEDPQNQLLNPAVKGTVNVLTAAKAL----G----VKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~----~~~~v~~SS~~~~~~~~~~~~ 140 (323)
++|+||||||...... ..+.+...+++|+.++.++++++... + ..++|++||..++.+.+..
T Consensus 80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-- 157 (261)
T 3n74_A 80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL-- 157 (261)
T ss_dssp HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC--
T ss_pred hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc--
Confidence 7899999999754221 34567789999999999999887332 1 3479999998665543321
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhH-HHHHHHHcCCC
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASM-LMLLRLLQGCT 216 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~-~~~~~~~~g~~ 216 (323)
..|+.+|.+.+.+++.++.+ .++++++++||.+.+|.......... .....+...
T Consensus 158 -------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-- 216 (261)
T 3n74_A 158 -------------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS-- 216 (261)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc--
Confidence 34999999999999998877 48999999999999986442211000 011111111
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.....+++++|+|++++.++.... ..|+ +++.+
T Consensus 217 ----~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 252 (261)
T 3n74_A 217 ----IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG 252 (261)
T ss_dssp ----CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ----CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC
Confidence 112237899999999999986433 3455 55643
No 209
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.94 E-value=8.5e-26 Score=188.35 Aligned_cols=197 Identities=22% Similarity=0.156 Sum_probs=140.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|+.++|+||||||+|+||++++++|+++|++|++++|+.+... .....+ .++.++.+|++|.++++++++
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ--ALAAEL----EGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHS----TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHh----hhceEEEecCCCHHHHHHHHHHHHH
Confidence 7777789999999999999999999999999999998642211 122222 267889999999998887765
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||..... ...+.+...+++|+.++.++++.+ ++.+.++||++||.+++.+...
T Consensus 75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 146 (234)
T 2ehd_A 75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG-------- 146 (234)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT--------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC--------
Confidence 789999999975322 134567789999999998666654 4556789999999865543221
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
...|+.+|.+.+.+++.++.+ .|++++++|||.+.++..... . ..
T Consensus 147 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~----~~------- 194 (234)
T 2ehd_A 147 -------------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT--------P----GQ------- 194 (234)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------------------------------
T ss_pred -------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc--------c----cc-------
Confidence 134999999999998888765 489999999999988743210 0 00
Q ss_pred CCCcccHHHHHHHHHHhhcCCC
Q 020608 223 FMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
+.+++++|+|++++.++..+.
T Consensus 195 -~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 195 -AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp ----CCHHHHHHHHHHHHHSCC
T ss_pred -cCCCCHHHHHHHHHHHhCCCc
Confidence 014689999999999997654
No 210
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.94 E-value=2.4e-26 Score=195.00 Aligned_cols=212 Identities=15% Similarity=0.087 Sum_probs=156.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+... ..++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999997643 2367889999999999888776
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++.. .+.++||++||.+++.+...
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 142 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN---------- 142 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC----------
Confidence 6899999999754322 3456788999999999999988743 45679999999966554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhCC--ccEEEEcCCCccCCCCCCCCc----hhH----HHHHHHHcCCCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKG--LDVVVVNPGTVMGPVIPPTLN----ASM----LMLLRLLQGCTD 217 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~Rp~~v~G~~~~~~~~----~~~----~~~~~~~~g~~~ 217 (323)
...|+.+|.+.+.+++.++.+.+ +++++++||.+.++....... ... ..........
T Consensus 143 -----------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 209 (264)
T 2dtx_A 143 -----------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH-- 209 (264)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS--
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC--
Confidence 13499999999999999987754 999999999998864211000 000 1111111111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+ ...+++++|+|++++.++.... ..|+ +++.+.
T Consensus 210 --p--~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (264)
T 2dtx_A 210 --P--MQRIGKPQEVASAVAFLASREASFITGTCLYVDGG 245 (264)
T ss_dssp --T--TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --C--CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 1 1237899999999999987542 3455 555443
No 211
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.94 E-value=1.1e-25 Score=191.64 Aligned_cols=223 Identities=17% Similarity=0.112 Sum_probs=159.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|+++.|+... ...+..+.+...+.++.++.+|++|.++++++++
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTK-DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567999999999999999999999999999998775422 2222233333335678999999999999888765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccc-cCCCCCCCCccccCCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSI-TPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~-~~~~~~~~~~~~~e~~ 148 (323)
++|+||||||...... +.+.+...+++|+.++.++++++...- .+++|++||..+. .+.+.
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 163 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK----------- 163 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC-----------
Confidence 6899999999864322 456778899999999999999986542 3499999998422 22111
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC---------CchhHHHHHHHHcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT---------LNASMLMLLRLLQGCT 216 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~---------~~~~~~~~~~~~~g~~ 216 (323)
...|+.||.+.+.+.+.++.+ .|+++++++||.+.+|..... ...............+
T Consensus 164 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 233 (270)
T 3is3_A 164 ----------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233 (270)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC
Confidence 144999999999999998877 489999999999999853210 0001111111111111
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 234 ------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 234 ------LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp ------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence 1226789999999999987543 3455 45543
No 212
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.94 E-value=4.8e-26 Score=193.62 Aligned_cols=213 Identities=18% Similarity=0.128 Sum_probs=157.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
.++|+||||||+|+||++++++|+++|++|++++|+.... .....++.+|++|.++++++++
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999875322 1256788999999999888765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++.. .+.++||++||.+++.+....
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 150 (269)
T 3vtz_A 80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA--------- 150 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC---------
Confidence 7899999999754322 3455678899999999999998643 455799999999776554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCC--------CchhHHHHHHHHcCCCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPT--------LNASMLMLLRLLQGCTD 217 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~g~~~ 217 (323)
..|+.||.+.+.+++.++.++ ++++++++||.|.++..... ...............
T Consensus 151 ------------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 216 (269)
T 3vtz_A 151 ------------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH-- 216 (269)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS--
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC--
Confidence 349999999999999998876 89999999999998742100 000011112221111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
....+.+++|+|++++.++.... ..|+ +++.++
T Consensus 217 ----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 217 ----PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252 (269)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence 11236789999999999997543 2455 566544
No 213
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.94 E-value=3.6e-26 Score=193.38 Aligned_cols=222 Identities=20% Similarity=0.191 Sum_probs=158.8
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-------G 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 77 (323)
+|++|||||+|+||++++++|+++|++|++++|+.......+..+.+...+.++.++.+|++|.++++++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999998754311222333333334578999999999998888776 7
Q ss_pred CCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCc-CEEEEecccccccCCCCCCCCccccCCC
Q 020608 78 CTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGV-KRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 78 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
+|+|||+||..... .+.+.+...+++|+.++.++++++.. .+. ++||++||.+++.+.+.
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 150 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI----------- 150 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT-----------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC-----------
Confidence 89999999975432 23456788999999999999999754 355 79999999966654321
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCch------h--HHHHHHHHcCCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNA------S--MLMLLRLLQGCTD 217 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~------~--~~~~~~~~~g~~~ 217 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.+.++........ . ......+....
T Consensus 151 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 218 (258)
T 3a28_C 151 ----------LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI-- 218 (258)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC--
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC--
Confidence 1349999999999999888764 89999999999988742110000 0 00111111111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
+ ...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 219 --p--~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 253 (258)
T 3a28_C 219 --A--LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG 253 (258)
T ss_dssp --T--TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred --C--CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 1 1237899999999999997542 3455 44543
No 214
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.94 E-value=9.7e-26 Score=191.46 Aligned_cols=223 Identities=20% Similarity=0.144 Sum_probs=155.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|.+++|++|||||+|+||++++++|+++|++|++..++... ...+..+.+...+.++.++.+|++|.++++++++
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAA-AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHH-HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 33467899999999999999999999999999988655432 2222233333334578999999999999888765
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... ..+.+...+++|+.++.++++++... ..+++|++||..+..+.+..
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 172 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY--------- 172 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc---------
Confidence 7899999999764322 34457788999999999999997543 13599999998666544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+++.++.+. |+++++++||.+.+|...... .......+....+ ..
T Consensus 173 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~ 232 (267)
T 3u5t_A 173 ------------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKLAP------LE 232 (267)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSST------TC
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhcCC------CC
Confidence 349999999999999999885 899999999999988643211 0111122222211 12
Q ss_pred CcccHHHHHHHHHHhhcCCCC--Ccc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPSA--CGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~ 253 (323)
.+.+++|+|++++.++..... .|+ +++.+
T Consensus 233 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 264 (267)
T 3u5t_A 233 RLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG 264 (267)
T ss_dssp SCBCHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 367899999999999975432 455 44544
No 215
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.94 E-value=6.8e-26 Score=193.72 Aligned_cols=229 Identities=17% Similarity=0.130 Sum_probs=162.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC----------cHHH-HHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS----------DERE-TAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.. +... .+..+.+...+.++.++.+|++|.+++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 56799999999999999999999999999999988421 2222 222333333356789999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPS 135 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~ 135 (323)
+++++ ++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ .++||++||..++.+.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ 168 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence 87765 589999999976442 24567788999999999999998632 22 4699999999766544
Q ss_pred CCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHH
Q 020608 136 PKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLL 212 (323)
Q Consensus 136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~ 212 (323)
+.. ..|+.||.+.+.+++.++.+. |+++++++||.+.+|..... ..........
T Consensus 169 ~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~ 225 (277)
T 3tsc_A 169 PFM---------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAME 225 (277)
T ss_dssp SSC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHHH
T ss_pred CCc---------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhccc
Confidence 321 349999999999999988774 89999999999999864311 0001111111
Q ss_pred cCCC---CCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 213 QGCT---DTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 213 ~g~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.... .........+.+++|+|++++.++.... ..|+ +++.++
T Consensus 226 ~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 273 (277)
T 3tsc_A 226 TNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273 (277)
T ss_dssp TCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence 1110 0011111237899999999999997543 3455 555544
No 216
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.94 E-value=3.6e-25 Score=190.85 Aligned_cols=222 Identities=11% Similarity=0.007 Sum_probs=162.6
Q ss_pred CCCCceEEEecccc--HHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 2 SKEAEVVCVTGGSG--CIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
.+++|++|||||+| +||++++++|+++|++|++++|+............. ...+.++.+|++|.++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES---LGVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH---HTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 45678999999997 999999999999999999999985433322222111 1246889999999999888775
Q ss_pred ----CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCc
Q 020608 77 ----GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++...- .++||++||.+++.+....
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~---- 179 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY---- 179 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc----
Confidence 68999999997542 23456788999999999999999986542 3599999999766544321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.++ |+++++++||.|.++..... ..............+.
T Consensus 180 -----------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~-- 239 (296)
T 3k31_A 180 -----------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNSPL-- 239 (296)
T ss_dssp -----------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHSTT--
T ss_pred -----------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcCCC--
Confidence 449999999999999988774 89999999999999865432 1111222222222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+..++|+|++++.++.... ..|+ +++.++
T Consensus 240 ----~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 273 (296)
T 3k31_A 240 ----RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273 (296)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence 225689999999999997532 3455 556443
No 217
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.94 E-value=6.6e-26 Score=192.55 Aligned_cols=222 Identities=16% Similarity=0.119 Sum_probs=160.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-CCCCeEEEEccCCCHhHHHHHhc----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-ADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.. .+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD--AARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 457799999999999999999999999999999999753322 22222221 24578999999999998887765
Q ss_pred ---CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ .++||++||..++.+....
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------ 168 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH------ 168 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC------
Confidence 789999999976432 23456788999999999999998743 22 3699999999766544321
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.|.+|....... .......+....+
T Consensus 169 ---------------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p----- 227 (266)
T 4egf_A 169 ---------------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIP----- 227 (266)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCT-----
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCC-----
Confidence 34999999999999998877 48999999999999874221000 0111222222221
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 228 -~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG 261 (266)
T 4egf_A 228 -LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDG 261 (266)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence 1236789999999999997533 3455 55544
No 218
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.94 E-value=1e-25 Score=191.80 Aligned_cols=221 Identities=15% Similarity=0.142 Sum_probs=160.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|+++.|+.. .........+...+.++.++.+|++|.++++++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN-DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH-HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35688999999999999999999999999999886532 22223333333445679999999999998887765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++.. .+.++||++||..++.+....
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 172 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ--------- 172 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB---------
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc---------
Confidence 7899999999764322 3456788999999999999998743 445799999999776654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.++ |+++++++||.+.++....... ...... ........
T Consensus 173 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~-~~~~~~~~ 232 (269)
T 3gk3_A 173 ------------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-------DVLEAK-ILPQIPVG 232 (269)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------CC-SGGGCTTS
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-------hHHHHH-hhhcCCcC
Confidence 349999999999998888764 8999999999999986542110 000100 00011122
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+.+++|+|++++.++.... ..|+ +++.+
T Consensus 233 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg 264 (269)
T 3gk3_A 233 RLGRPDEVAALIAFLCSDDAGFVTGADLAING 264 (269)
T ss_dssp SCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred CccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence 36789999999999997643 3455 66654
No 219
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.94 E-value=2.6e-25 Score=189.03 Aligned_cols=220 Identities=18% Similarity=0.097 Sum_probs=156.6
Q ss_pred CCCceEEEecccc-HHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSG-CIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|++|||||+| .||++++++|+++|++|++++|+.+... +..+.+... ..++.++.+|++|.++++++++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG--ETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHH--HHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 5678999999998 6999999999999999999999753322 223333222 3579999999999999887765
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC-----CcCEEEEecccccccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL-----GVKRVVVTSSISSITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~ 144 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++... +.++||++||..++.+...
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 170 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS------- 170 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-------
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-------
Confidence 6799999999754322 44567889999999999999997543 4568999999866654432
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+ .|+++++++||.+.++....... ......+... .
T Consensus 171 --------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~------~ 228 (266)
T 3o38_A 171 --------------QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SELLDRLASD------E 228 (266)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------C------C
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHHHHHHHhc------C
Confidence 144999999999999998877 58999999999999886432111 1111111111 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
....+.+++|+|++++.++.... ..|+ +++.+
T Consensus 229 ~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 229 AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence 12337799999999999987533 3455 45544
No 220
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.94 E-value=1.9e-25 Score=185.60 Aligned_cols=212 Identities=15% Similarity=0.058 Sum_probs=157.7
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-------G 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 77 (323)
+|+||||||++.||+++++.|+++|++|++.+|+.. . +.++.....++.++.+|++|+++++++++ +
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~---~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK---R---SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---H---HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH---H---HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999998632 1 11222224578899999999998887765 7
Q ss_pred CCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 78 CTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 78 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
+|++|||||..... .+.+.|+..+++|+.++..+.+++. +.+ +++|++||..+..+.+..
T Consensus 76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~----------- 143 (247)
T 3ged_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDS----------- 143 (247)
T ss_dssp CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTC-----------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCC-----------
Confidence 89999999975432 2456789999999999999988873 334 699999999776654421
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcc
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSV 227 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 227 (323)
..|+.||.....+.+.++.+. +++++.|.||.+-.|...... ....... |.+ .+.
T Consensus 144 ----------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~-------~~~~~~~----Pl~--R~g 200 (247)
T 3ged_A 144 ----------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFT-------QEDCAAI----PAG--KVG 200 (247)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CC-------HHHHHTS----TTS--SCB
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHH-------HHHHhcC----CCC--CCc
Confidence 349999999999998888775 899999999999887643221 1111211 111 155
Q ss_pred cHHHHHHHHHHhhcCCCCCccEEEEcCccC
Q 020608 228 HFKDVALAHILVYENPSACGRHLCVEAISH 257 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~ 257 (323)
.++|+|.+++.++......|+.+..+..+|
T Consensus 201 ~pediA~~v~fL~s~~~iTG~~i~VDGG~s 230 (247)
T 3ged_A 201 TPKDISNMVLFLCQQDFITGETIIVDGGMS 230 (247)
T ss_dssp CHHHHHHHHHHHHHCSSCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHHhCCCCCCCeEEECcCHH
Confidence 799999999999986555666554444444
No 221
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=4.3e-26 Score=197.56 Aligned_cols=222 Identities=14% Similarity=0.114 Sum_probs=157.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-----CCCCeEEEEccCCCHhHHHHHhc-
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-----ADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+.. .+.++.++.+|++|.++++++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK--SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 56789999999999999999999999999999999753222 22222211 24578999999999999888776
Q ss_pred ------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCc
Q 020608 77 ------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+.+++|++||.+ ..+.+.
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~----- 167 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL----- 167 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT-----
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc-----
Confidence 589999999964321 13345678899999999999999754 2346999999985 333221
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCch-hHHHHHHHHcCCCCC
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNA-SMLMLLRLLQGCTDT 218 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~-~~~~~~~~~~g~~~~ 218 (323)
...|+.+|...+.+.+.++.+. |++++++|||.++||........ ...........
T Consensus 168 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---- 227 (303)
T 1yxm_A 168 ----------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---- 227 (303)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc----
Confidence 1349999999999999988775 89999999999999942111110 00001111111
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+ ...+++++|+|++++.++.... ..|+ +++.++
T Consensus 228 ~p--~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 228 IP--AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp ST--TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred Cc--ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 11 1237899999999999987533 3455 556544
No 222
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.94 E-value=5.5e-26 Score=192.04 Aligned_cols=220 Identities=20% Similarity=0.164 Sum_probs=156.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-------G 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 77 (323)
+|++|||||+|+||++++++|+++|++|++++|+..... +..+.+...+.++.++.+|++|.++++++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK--AVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999753222 2222232223468899999999999888776 7
Q ss_pred CCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCCCCCCCccccCCC
Q 020608 78 CTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 78 ~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
+|+|||+||..... ...+.+...+++|+.++.++++++.. .+ .+++|++||..++++.+..
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------- 149 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL---------- 149 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB----------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCc----------
Confidence 89999999975322 13456778999999999998888743 34 5799999998666543211
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCc---h-----hHHHHHHHHcCCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLN---A-----SMLMLLRLLQGCTD 217 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~---~-----~~~~~~~~~~g~~~ 217 (323)
..|+.+|.+.+.+++.++.+ +|+++++++||.+.+|....... . .......+....
T Consensus 150 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 216 (256)
T 1geg_A 150 -----------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI-- 216 (256)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC--
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC--
Confidence 34999999999999988876 48999999999999874211000 0 000011111111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
+ ...+.+++|+|++++.++.... ..|+ +.+.+
T Consensus 217 --p--~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 217 --T--LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG 251 (256)
T ss_dssp --T--TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred --C--CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 1 1237899999999999987542 3455 44543
No 223
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=2.3e-26 Score=193.21 Aligned_cols=219 Identities=18% Similarity=0.132 Sum_probs=156.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh---cCC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV---TGC 78 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~ 78 (323)
++++|++|||||+|+||++++++|+++|++|++++|+..+ ++.+.. ..++.++.+|++|.+++++++ .++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~i 75 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK------LQELEK-YPGIQTRVLDVTKKKQIDQFANEVERL 75 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH------HGGGGG-STTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH------HHHHHh-ccCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999986421 111111 126889999999999888764 478
Q ss_pred CEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCCC
Q 020608 79 TGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCWT 150 (323)
Q Consensus 79 d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~ 150 (323)
|+|||+||..... ...+.+...+++|+.++.++++++. +.+.+++|++||.+++.+...
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 142 (246)
T 2ag5_A 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV------------- 142 (246)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT-------------
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC-------------
Confidence 9999999975432 1345677889999999999999974 345679999999865543220
Q ss_pred ChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC---chhHHHHHHHHcCCCCCccCcCC
Q 020608 151 DEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL---NASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 151 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
....|+.+|.+.+.+++.++.+. |++++++|||.+++|...... .........+....+ . .
T Consensus 143 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~--~ 209 (246)
T 2ag5_A 143 -------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK----T--G 209 (246)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT----T--S
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC----C--C
Confidence 01349999999999999988764 899999999999998522100 000111222222211 1 2
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+++++|+|++++.++.... ..|+ +++.+
T Consensus 210 ~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg 241 (246)
T 2ag5_A 210 RFATAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (246)
T ss_dssp SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 36799999999999987533 3455 45544
No 224
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.94 E-value=1.3e-25 Score=191.75 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=160.5
Q ss_pred CC-CCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-
Q 020608 1 MS-KEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 1 m~-~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
|+ +++|++|||||+ |+||++++++|+++|++|++++|+.......+.+... ..++.++.+|++|.++++++++
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~ 77 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNS 77 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHH
Confidence 55 678999999999 9999999999999999999999986422222222211 1247789999999998887765
Q ss_pred ------CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCC
Q 020608 77 ------GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++... ..++||++||.++..+...
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--- 154 (275)
T 2pd4_A 78 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH--- 154 (275)
T ss_dssp HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT---
T ss_pred HHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC---
Confidence 67999999997542 2245567889999999999999998765 1259999999866554321
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD 217 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~ 217 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.++...... ........+....+.
T Consensus 155 ------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~ 215 (275)
T 2pd4_A 155 ------------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAPL 215 (275)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT
T ss_pred ------------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcCCc
Confidence 1349999999999999888775 899999999999998643211 111222222222111
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.+.
T Consensus 216 ------~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg 249 (275)
T 2pd4_A 216 ------RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249 (275)
T ss_dssp ------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 125689999999999987532 2455 445443
No 225
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.94 E-value=1.3e-25 Score=190.84 Aligned_cols=222 Identities=19% Similarity=0.172 Sum_probs=157.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhc-cCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKAL-EGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+... +....+ ...+.++.++.+|++|.++++++++
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS--EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999753222 122222 1113468889999999998887766
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccc-cccCCCCCCCCccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSIS-SITPSPKWPADKVK 144 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~-~~~~~~~~~~~~~~ 144 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++ ++.+.++||++||.+ +..+...
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------- 168 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN------- 168 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS-------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC-------
Confidence 7899999999754321 33456789999999999998887 344568999999985 3322211
Q ss_pred cCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 145 DEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 145 ~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+ +|+++++++||.+.++...... ........+....+ .
T Consensus 169 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p----~ 229 (267)
T 1vl8_A 169 --------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIP----L 229 (267)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCT----T
T ss_pred --------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccc-cChHHHHHHHhhCC----C
Confidence 134999999999999998876 4899999999999987532100 00111222222221 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+++++|+|++++.++.... ..|+ +.+.+
T Consensus 230 --~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 262 (267)
T 1vl8_A 230 --GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG 262 (267)
T ss_dssp --SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence 236789999999999987532 3455 44543
No 226
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.94 E-value=5e-26 Score=192.35 Aligned_cols=220 Identities=16% Similarity=0.132 Sum_probs=159.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEec-CCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVK-NLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.++|+||||||+|+||++++++|+++|++|+++.+ +..... +....+.....++.++.+|++|.++++++++
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV--KWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH--HHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999884 433322 2222222234578999999999998888776
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+....
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 160 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ-------- 160 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC--------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC--------
Confidence 689999999976432 234567789999999998888876 34456799999999777654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.+.++...... ......+....+ .
T Consensus 161 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~------~ 218 (256)
T 3ezl_A 161 -------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---PDVLEKIVATIP------V 218 (256)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHHHST------T
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC---HHHHHHHHhcCC------C
Confidence 34999999999999988877 4899999999999987543221 122223222221 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (256)
T 3ezl_A 219 RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 236789999999999986432 3455 566543
No 227
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=2e-26 Score=196.42 Aligned_cols=202 Identities=14% Similarity=0.069 Sum_probs=152.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|+||||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.++++++++
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE--ETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHH--HHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999753222 2222232224578999999999998887765
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.++||++||..++.+...
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 176 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF-------- 176 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------
Confidence 7899999999754322 234566889999999888887763 456689999999865543210
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC------CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK------GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
...|+.+|.+.+.+++.++.+. |++++++|||.+.++..... . .
T Consensus 177 -------------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~----~---------- 226 (272)
T 1yb1_A 177 -------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S----T---------- 226 (272)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H----H----------
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---c----c----------
Confidence 1449999999999999888764 89999999999999863210 0 0
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
....+++++|+|++++.++..+.
T Consensus 227 --~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 227 --SLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp --HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred --cccCCCCHHHHHHHHHHHHHcCC
Confidence 01236789999999999998653
No 228
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.94 E-value=5.6e-26 Score=189.41 Aligned_cols=198 Identities=17% Similarity=0.055 Sum_probs=148.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
|++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+. .++.++.+|++|.++++++++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ--QQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999753222 2222222 258899999999998887765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++.. .+ +++|++||.++..+....
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~--------- 145 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANE--------- 145 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSH---------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCC---------
Confidence 689999999985432 24566788999999999999998733 33 399999998766654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+.+.++.+. |+++++++||.+.++....... . ...
T Consensus 146 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~------~~~ 195 (235)
T 3l6e_A 146 ------------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------V------DPS 195 (235)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------C------CCc
Confidence 349999999999999998874 8999999999998875321100 0 011
Q ss_pred CcccHHHHHHHHHHhhcCCCC
Q 020608 225 GSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~ 245 (323)
.+++++|+|++++.++..+..
T Consensus 196 ~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 196 GFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp -CBCHHHHHHHHHHHTCCCSS
T ss_pred CCCCHHHHHHHHHHHHhCCCC
Confidence 367899999999999986544
No 229
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.94 E-value=5.2e-25 Score=184.63 Aligned_cols=222 Identities=19% Similarity=0.129 Sum_probs=162.0
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||++.||+++++.|+++|++|++.+|+.+.....+...+ ...++.++.+|++|+++++++++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ---RQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHh---cCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998766443333322 24578999999999998887665
Q ss_pred ---CCCEEEEcccCCccC---CCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 ---GCTGVFHLASPCIVD---KVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|++|||||..... .+.+.|...+++|+.++..+.+++... +-+++|++||.++..+.+..
T Consensus 80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------- 150 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--------- 150 (258)
T ss_dssp HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC---------
T ss_pred HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc---------
Confidence 689999999975322 245678899999999999999887321 23699999999877665431
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCch---hHHHHHHHHcCCCCCccC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNA---SMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~---~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.||.....+.+.++.+ +|++++.|.||.|..|........ .......+....|. +
T Consensus 151 ------------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--g- 215 (258)
T 4gkb_A 151 ------------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL--G- 215 (258)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT--T-
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC--C-
Confidence 34999999999999988876 489999999999999865422110 01112222222211 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCccEEE
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGRHLC 251 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 251 (323)
..+..++|+|.+++.++.... ..|+.+.
T Consensus 216 --~R~g~peeiA~~v~fLaS~~a~~iTG~~i~ 245 (258)
T 4gkb_A 216 --RRFTTPDEIADTAVFLLSPRASHTTGEWLF 245 (258)
T ss_dssp --TSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred --CCCcCHHHHHHHHHHHhCchhcCccCCeEE
Confidence 125679999999999987543 3556443
No 230
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.94 E-value=3.1e-26 Score=199.88 Aligned_cols=235 Identities=17% Similarity=0.120 Sum_probs=170.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC-------C-cHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL-------S-DERETAHLKALEGADTRLRLFQIDLLDYDAIAAA 74 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-------~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (323)
+++|++|||||+|+||++++++|+++|++|++++|+. . ........+.+...+.++.++.+|++|.++++++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 4678999999999999999999999999999998861 0 1112222333333345788999999999998887
Q ss_pred hc-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhCC----------cCEEEEeccccccc
Q 020608 75 VT-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKALG----------VKRVVVTSSISSIT 133 (323)
Q Consensus 75 ~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~SS~~~~~ 133 (323)
++ ++|+||||||..... .+.+.+...+++|+.++.++++++...- -++||++||.+++.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 76 789999999976432 2455678899999999999999874321 15999999997776
Q ss_pred CCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHH
Q 020608 134 PSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLR 210 (323)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~ 210 (323)
+.... ..|+.||.+.+.+++.++.+ +|+++++++|| +.++.......... .
T Consensus 185 ~~~~~---------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~- 238 (322)
T 3qlj_A 185 GSVGQ---------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---A- 238 (322)
T ss_dssp CBTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------
T ss_pred CCCCC---------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---h-
Confidence 54321 34999999999999998877 58999999999 77765432211110 0
Q ss_pred HHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC------------------ccCHHHHHHHHHHHC
Q 020608 211 LLQGCTDTYENFFMGSVHFKDVALAHILVYENPSA--CGR-HLCVEA------------------ISHYGDFVAKVAELY 269 (323)
Q Consensus 211 ~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~------------------~~~~~e~~~~i~~~~ 269 (323)
.+...+.+++++|+|.+++.++..... .|+ +++.++ ..++.|+++.+.+.+
T Consensus 239 --------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~ 310 (322)
T 3qlj_A 239 --------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL 310 (322)
T ss_dssp -------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred --------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence 111223467899999999999875432 344 555432 236789999998887
Q ss_pred CC
Q 020608 270 PE 271 (323)
Q Consensus 270 ~~ 271 (323)
+.
T Consensus 311 ~~ 312 (322)
T 3qlj_A 311 GK 312 (322)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 231
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.94 E-value=2.9e-26 Score=194.25 Aligned_cols=226 Identities=12% Similarity=0.070 Sum_probs=158.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHH-HHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERET-AHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
++++|++|||||+|+||++++++|+++|++|+++.|...+.+.. +..+.+...+.++.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999998865443332 3333444445678999999999999888776
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++... +.+++|++||.++..+....
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~--------- 158 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY--------- 158 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC---------
Confidence 6899999999754322 44567889999999999999998764 34699999998766554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.||.+.+.+++.++.+. |+++++++||.+.++........ ......... ....
T Consensus 159 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~------~~~~ 218 (262)
T 3ksu_A 159 ------------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK--ESTAFHKSQ------AMGN 218 (262)
T ss_dssp ------------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------------CCC
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch--HHHHHHHhc------Cccc
Confidence 349999999999999998885 89999999999987642111100 000000000 0112
Q ss_pred CcccHHHHHHHHHHhhcCCC-CCcc-EEEEcCcc
Q 020608 225 GSVHFKDVALAHILVYENPS-ACGR-HLCVEAIS 256 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~-~~~~-~~~~~~~~ 256 (323)
.+.+++|+|++++.++.... ..|+ +++.|+..
T Consensus 219 r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 219 QLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT 252 (262)
T ss_dssp CSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred CCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence 36789999999999998621 2455 55655433
No 232
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.94 E-value=3.1e-25 Score=187.21 Aligned_cols=219 Identities=19% Similarity=0.112 Sum_probs=160.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+++ +.++.++.+|++|.++++++++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIA--RIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999743222 222222 2478999999999998887654
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++... ..++||++||.+++.+.+..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 149 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM----------- 149 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc-----------
Confidence 6899999999764322 45667889999999999999998654 23599999999766554321
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchh--H-HHHHHHHcCCCCCccCcC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNAS--M-LMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~--~-~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+.+.++.+. |+++++++||.+.+|......... . ..........+ .
T Consensus 150 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------~ 213 (255)
T 4eso_A 150 ----------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP------M 213 (255)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST------T
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC------C
Confidence 349999999999999998875 899999999999998653211111 1 11111111111 1
Q ss_pred CCcccHHHHHHHHHHhhcC-CCCCcc-EEEEc
Q 020608 224 MGSVHFKDVALAHILVYEN-PSACGR-HLCVE 253 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~-~~~~~~-~~~~~ 253 (323)
..+.+++|+|++++.++.. ....|+ +++.+
T Consensus 214 ~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG 245 (255)
T 4eso_A 214 KRNGTADEVARAVLFLAFEATFTTGAKLAVDG 245 (255)
T ss_dssp SSCBCHHHHHHHHHHHHHTCTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHcCcCcCccCCEEEECC
Confidence 2256899999999999875 223455 55643
No 233
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=4.4e-26 Score=193.90 Aligned_cols=224 Identities=17% Similarity=0.111 Sum_probs=154.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC--CCCeEEEEccCCCHhHHHHHhc-----
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA--DTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... +.++.++.+|++|.++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV--QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998743221 222222221 2368899999999998887765
Q ss_pred --CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHH----HhhCC---cCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTA----AKALG---VKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||.. ..+++...+++|+.++.++.+. +++.+ .++||++||.+++.+.+..
T Consensus 84 ~g~id~lv~~Ag~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 150 (267)
T 2gdz_A 84 FGRLDILVNNAGVN----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ--------- 150 (267)
T ss_dssp HSCCCEEEECCCCC----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC---------
T ss_pred cCCCCEEEECCCCC----ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC---------
Confidence 579999999974 3467888999999976665555 44432 5799999999665543211
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHH--H---hCCccEEEEcCCCccCCCCCCCCchhHH-----HHHHHHcCCCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFA--K---EKGLDVVVVNPGTVMGPVIPPTLNASML-----MLLRLLQGCTD 217 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~---~~~~~~~~~Rp~~v~G~~~~~~~~~~~~-----~~~~~~~g~~~ 217 (323)
..|+.+|.+.+.+++.++ . ..|+++++++||.+.+|........... .......
T Consensus 151 ------------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---- 214 (267)
T 2gdz_A 151 ------------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD---- 214 (267)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH----
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH----
Confidence 349999999999988742 2 3589999999999988742110000000 0000000
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEE-cCccCHHH
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPSACGR-HLCV-EAISHYGD 260 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~-~~~~~~~e 260 (323)
+.....+++++|+|++++.++......|+ ++++ ++.+++.|
T Consensus 215 --~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 215 --MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp --HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred --HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 01112367999999999999987655555 6675 45555544
No 234
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.94 E-value=6.1e-25 Score=186.72 Aligned_cols=223 Identities=13% Similarity=0.057 Sum_probs=162.4
Q ss_pred CCCCceEEEeccccH--HHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 2 SKEAEVVCVTGGSGC--IGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
++++|++|||||+|+ ||++++++|+++|++|+++.|+.........+.... ...++.++.+|++|.++++++++
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL-DRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS-SSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc-CCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 467899999999988 999999999999999999998753333322222111 12378999999999998887765
Q ss_pred ----CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCc
Q 020608 77 ----GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+|||+||.... ..+.+.+...+++|+.++.++++++...- .++||++||.+++.+.+..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 158 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY---- 158 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc----
Confidence 68999999997541 12445677899999999999999986642 3599999999776554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.+. |+++++++||.+.++....... .......+....+.
T Consensus 159 -----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~-- 218 (266)
T 3oig_A 159 -----------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAPL-- 218 (266)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHSTT--
T ss_pred -----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCCC--
Confidence 349999999999999988774 8999999999999986543221 12222232222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+.+++|+|++++.++.... ..|+ +++.+
T Consensus 219 ----~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 219 ----RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS 251 (266)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence 226789999999999997533 3455 55644
No 235
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.94 E-value=4.7e-26 Score=193.26 Aligned_cols=212 Identities=18% Similarity=0.142 Sum_probs=155.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+..... ....+.+|++|.+++.++++
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~~ 91 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAAG 91 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence 356799999999999999999999999999999988753211 22445899999988776654
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... ...+.+...+++|+.++.++++++ ++.+.++||++||.+++.+....
T Consensus 92 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------- 163 (266)
T 3uxy_A 92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGH-------- 163 (266)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTB--------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCC--------
Confidence 789999999986432 245567889999999999999998 44556799999999766544321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCC----CchhHHHHHHHHcCCCCCc
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPT----LNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~----~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.+. |+++++++||.+++|..... ..........+....+
T Consensus 164 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p--- 227 (266)
T 3uxy_A 164 -------------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP--- 227 (266)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST---
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC---
Confidence 349999999999999988775 89999999999998742110 0000111122222211
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|++++.++.... ..|+ +++.+
T Consensus 228 ---~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 261 (266)
T 3uxy_A 228 ---LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG 261 (266)
T ss_dssp ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence 1236799999999999997643 2455 55643
No 236
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.94 E-value=4e-26 Score=195.05 Aligned_cols=223 Identities=14% Similarity=0.110 Sum_probs=160.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALE-GADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +....+. ..+.++.++.+|++|.++++++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVL--TAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999753222 2222221 113578999999999998887765
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++. +.+.++||++||..+..+....
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 174 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ-------- 174 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------
Confidence 789999999965322 2456678899999999999999973 2334699999999777654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.++....................+ .
T Consensus 175 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~ 235 (277)
T 4fc7_A 175 -------------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------L 235 (277)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------T
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------C
Confidence 349999999999999988774 899999999999987421000000112222222221 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|.+++.++.... ..|+ +++.++
T Consensus 236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG 269 (277)
T 4fc7_A 236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG 269 (277)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence 236789999999999997533 3455 555443
No 237
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.5e-26 Score=196.04 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=155.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC---EEEEEecCCCcHHHHHHHhhccC--CCCCeEEEEccCCCHhHHHHHhc-
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY---TVHATVKNLSDERETAHLKALEG--ADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
+++|++|||||+|+||++++++|+++|+ +|++.+|+.+... +..+.+.. .+.++.++.+|++|.++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLE--ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHH--HHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHH--HHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 4678999999999999999999999987 9999998753322 22222221 23578899999999999998876
Q ss_pred ------CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCC
Q 020608 77 ------GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPAD 141 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~ 141 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.++..+....
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~--- 185 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG--- 185 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC---
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC---
Confidence 579999999975321 144567889999999999999997 34456799999999776554321
Q ss_pred ccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC
Q 020608 142 KVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT 218 (323)
Q Consensus 142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~ 218 (323)
..|+.+|.+.+.+.+.++.+ .|+++++++||.|.++....................
T Consensus 186 ------------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--- 244 (287)
T 3rku_A 186 ------------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDT--- 244 (287)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTS---
T ss_pred ------------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhccc---
Confidence 34999999999999999888 489999999999998742100000001111111111
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCCC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
.+++++|+|++++.++.....
T Consensus 245 ------~p~~pedvA~~v~~l~s~~~~ 265 (287)
T 3rku_A 245 ------TPLMADDVADLIVYATSRKQN 265 (287)
T ss_dssp ------CCEEHHHHHHHHHHHHTSCTT
T ss_pred ------CCCCHHHHHHHHHHHhCCCCC
Confidence 134899999999999986654
No 238
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.94 E-value=4.4e-25 Score=192.08 Aligned_cols=227 Identities=18% Similarity=0.124 Sum_probs=161.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCc---------HHH-HHHHhhccCCCCCeEEEEccCCCHhHHH
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSD---------ERE-TAHLKALEGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
+++|++|||||+|+||++++++|+++|++|++++|+... .+. .+..+.+...+.++.++.+|++|.++++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 567899999999999999999999999999999886321 222 2222233333567899999999999988
Q ss_pred HHhc-------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhh----CC-cCEEEEecccccccCCC
Q 020608 73 AAVT-------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKA----LG-VKRVVVTSSISSITPSP 136 (323)
Q Consensus 73 ~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~ 136 (323)
++++ ++|+||||||...... +.+.+...+++|+.++.++++++.. .+ .++||++||..++.+..
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~ 203 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP 203 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence 8776 7899999999764322 4456788999999999999998732 32 46899999997765543
Q ss_pred CCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC----------ch
Q 020608 137 KWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL----------NA 203 (323)
Q Consensus 137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~----------~~ 203 (323)
.. ..|+.||.+.+.+++.++.+. |+++++++||.|++|...... ..
T Consensus 204 ~~---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 262 (317)
T 3oec_A 204 GQ---------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP 262 (317)
T ss_dssp TB---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred CC---------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence 21 349999999999999998774 899999999999997432100 00
Q ss_pred hHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 204 SMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 204 ~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
............ ......+++++|+|.+++.++.... ..|+ +++.++
T Consensus 263 ~~~~~~~~~~~~----~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG 312 (317)
T 3oec_A 263 TREDAAELFSQL----TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312 (317)
T ss_dssp CHHHHHHHHTTT----CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred chhHHHHHHhhh----ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence 000001111110 0111457899999999999986533 3455 556543
No 239
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.94 E-value=2.5e-25 Score=189.25 Aligned_cols=209 Identities=17% Similarity=0.143 Sum_probs=157.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC---CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR---YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 76 (323)
++||+||||||+|+||++++++|+++| ++|++++|+.........+.. ...++.++.+|++|.++++++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK---NHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH---HCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhc---cCCceEEEEecCCChHHHHHHHHHHH
Confidence 578999999999999999999999999 999999998765443222221 13478999999999999888776
Q ss_pred ------CCCEEEEcccCCc-c----CCCCCchhhhhhHHHHHHHHHHHHHhhC----------C-----cCEEEEecccc
Q 020608 77 ------GCTGVFHLASPCI-V----DKVEDPQNQLLNPAVKGTVNVLTAAKAL----------G-----VKRVVVTSSIS 130 (323)
Q Consensus 77 ------~~d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~SS~~ 130 (323)
++|+|||+||... . ....+.+...+++|+.++.++++++... + .++||++||..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 7999999999754 1 1234567789999999999999998442 2 46999999986
Q ss_pred cccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHH
Q 020608 131 SITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLM 207 (323)
Q Consensus 131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~ 207 (323)
++.+.... + ....|+.+|.+.+.+++.++.+ .+++++++|||.+.++....
T Consensus 176 ~~~~~~~~----------~--------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------- 229 (267)
T 1sny_A 176 GSIQGNTD----------G--------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------- 229 (267)
T ss_dssp GCSTTCCS----------C--------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------
T ss_pred ccccCCCC----------C--------CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------
Confidence 65543210 0 1134999999999999998877 58999999999998875321
Q ss_pred HHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccEEE-EcCcc
Q 020608 208 LLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRHLC-VEAIS 256 (323)
Q Consensus 208 ~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~-~~~~~ 256 (323)
..++.++|+|+.++.++.... ..|.|.. .+..+
T Consensus 230 ----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 230 ----------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp ----------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred ----------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 124678999999999987532 3455543 34433
No 240
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.94 E-value=9.2e-26 Score=186.73 Aligned_cols=204 Identities=17% Similarity=0.120 Sum_probs=153.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---C
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---G 77 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~ 77 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+.. +|++|+++++++++ +
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~ 59 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGA 59 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCC
Confidence 5677899999999999999999999999999999988631 89999999888876 6
Q ss_pred CCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCccccCCCCC
Q 020608 78 CTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADKVKDEDCWT 150 (323)
Q Consensus 78 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~ 150 (323)
+|+||||||.... ..+.+.+...+++|+.++.++++++...- .+++|++||..++.+...
T Consensus 60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------- 126 (223)
T 3uce_A 60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN------------- 126 (223)
T ss_dssp EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT-------------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC-------------
Confidence 8999999997522 12345677889999999999999986642 248999999966554332
Q ss_pred ChhhhccCCCchHHHHHHHHHHHHHHHHhCC-ccEEEEcCCCccCCCCCCCCchhH-HHHHHHHcCCCCCccCcCCCccc
Q 020608 151 DEEYCRQNEIWYPLSKTLAEKAAWEFAKEKG-LDVVVVNPGTVMGPVIPPTLNASM-LMLLRLLQGCTDTYENFFMGSVH 228 (323)
Q Consensus 151 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~Rp~~v~G~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~i~ 228 (323)
...|+.+|.+.+.+++.++.+++ ++++.++||.+.+|.......... ..........+ ...+.+
T Consensus 127 --------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 192 (223)
T 3uce_A 127 --------TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGE 192 (223)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBC
T ss_pred --------chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccC
Confidence 13499999999999999998864 999999999999986543222111 12222222221 123678
Q ss_pred HHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 229 FKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 229 v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
++|+|++++.+++.....|+ +++.+
T Consensus 193 ~~dvA~~~~~l~~~~~~tG~~i~vdg 218 (223)
T 3uce_A 193 ASDIAMAYLFAIQNSYMTGTVIDVDG 218 (223)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHHHHccCCCCCCcEEEecC
Confidence 99999999999986655666 55644
No 241
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.94 E-value=2.7e-25 Score=185.41 Aligned_cols=202 Identities=17% Similarity=0.115 Sum_probs=153.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALE-GADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+||++|||||+|+||++++++|+++|++|++++|+.+.... ..+.+. ..+.++.++.+|++|.++++++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEK--IAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--HHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999997533222 222221 124578999999999999998876
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++... +.+++|++||..+..+.+..
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~---------- 148 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG---------- 148 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC----------
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc----------
Confidence 6899999999864432 44567889999999999999997542 23588888887565543211
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHhC-CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcc
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSV 227 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 227 (323)
..|+.+|.+.+.+++.+..+. ++++++++||.+.++....... . .....++
T Consensus 149 -----------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------------~-----~~~~~~~ 200 (235)
T 3l77_A 149 -----------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------------K-----PKEKGYL 200 (235)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------------C-----CGGGTCB
T ss_pred -----------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC------------c-----ccccCCC
Confidence 349999999999999885554 9999999999998875432110 0 0111467
Q ss_pred cHHHHHHHHHHhhcCCCC
Q 020608 228 HFKDVALAHILVYENPSA 245 (323)
Q Consensus 228 ~v~D~a~~~~~~~~~~~~ 245 (323)
.++|+|++++.++..+..
T Consensus 201 ~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 201 KPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp CHHHHHHHHHHHHTSCTT
T ss_pred CHHHHHHHHHHHHcCCCC
Confidence 899999999999987654
No 242
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.94 E-value=1.1e-25 Score=187.99 Aligned_cols=222 Identities=13% Similarity=0.059 Sum_probs=162.3
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||++.||+++++.|+++|++|++.+|+.+ ...+..+++...+.++.++.+|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~--~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRAT--LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHH--HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999988642 2233444454445688999999999999887765
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh-----hCCcCEEEEecccccccCCCCCCCCcccc
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK-----ALGVKRVVVTSSISSITPSPKWPADKVKD 145 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~ 145 (323)
++|++|||||...... +.++|+..+++|+.++..+.+++. +.+.+++|++||.++..+.+..
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~------- 156 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV------- 156 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC-------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc-------
Confidence 6899999999764322 566889999999999999998862 2344699999999776654421
Q ss_pred CCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 146 EDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 146 e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.||.....+.+.++.+ +|++++.|.||.+..|...... ........+....| .+
T Consensus 157 --------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~P----l~ 217 (255)
T 4g81_D 157 --------------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI-EDKQFDSWVKSSTP----SQ 217 (255)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH-TCHHHHHHHHHHST----TC
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc-CCHHHHHHHHhCCC----CC
Confidence 34999999999999888877 4899999999999987532100 00111122222111 11
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCccEE-EEc
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGRHL-CVE 253 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~~-~~~ 253 (323)
.+..++|+|.+++.++.... -.|+.+ +.+
T Consensus 218 --R~g~pediA~~v~fL~S~~a~~iTG~~i~VDG 249 (255)
T 4g81_D 218 --RWGRPEELIGTAIFLSSKASDYINGQIIYVDG 249 (255)
T ss_dssp --SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence 14578999999999986533 345543 443
No 243
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.94 E-value=1.8e-26 Score=196.85 Aligned_cols=224 Identities=15% Similarity=0.044 Sum_probs=160.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+..... .+.+...+.++.++.+|++|.++++++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV--QQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH--HHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999987544332 22222234578999999999988887765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---------- 177 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV---------- 177 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC----------
Confidence 789999999975332 245567889999999999999997 3345579999999966553221
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.||.+.+.+++.++.++ |+++++++||.+.+|..................... +. .
T Consensus 178 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---p~--~ 241 (275)
T 4imr_A 178 -----------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN---WM--G 241 (275)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS---TT--C
T ss_pred -----------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC---cc--C
Confidence 1349999999999999988775 899999999999887421100000011111111110 11 1
Q ss_pred CcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 225 GSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
.+..++|+|.+++.++.... ..|+ +++.+
T Consensus 242 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 242 RAGRPEEMVGAALFLASEACSFMTGETIFLTG 273 (275)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence 25678999999999997543 2455 44543
No 244
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=8.8e-26 Score=193.27 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=148.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC--CCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA--DTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+..+.. +..+.+... ..++.++.+|++|.++++++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE--ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHH--HHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999753222 222222211 2357889999999999887765
Q ss_pred ---CCCEEEEcccCCccCC----CCCchhhhhhHHHHH----HHHHHHHHhhCCc--CEEEEecccccccCCCCCCCCcc
Q 020608 77 ---GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKG----TVNVLTAAKALGV--KRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||...... ..+.+...+++|+.+ ++.++..+++.+. ++||++||.+++...+.
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~------ 181 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------ 181 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC------
Confidence 7899999999754322 334577899999999 6666666677665 79999999855421110
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh-----CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE-----KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT 218 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~ 218 (323)
. ....|+.+|.+.+.+++.++.+ .++++++++||.+.++.................
T Consensus 182 -------~------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------ 242 (279)
T 1xg5_A 182 -------S------VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY------ 242 (279)
T ss_dssp -------G------GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH------
T ss_pred -------C------CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhc------
Confidence 0 0145999999999998887765 479999999999988742100000000000000
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
....+++++|+|++++.++..+.
T Consensus 243 ---~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 243 ---EQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp ---C---CBCHHHHHHHHHHHHHSCT
T ss_pred ---ccccCCCHHHHHHHHHHHhcCCc
Confidence 11236799999999999998654
No 245
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.94 E-value=1.2e-25 Score=192.33 Aligned_cols=213 Identities=17% Similarity=0.146 Sum_probs=151.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... ...+.++.+|++|.++++++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD--AAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999753322 222222111 1235889999999998887765
Q ss_pred --CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhh----CC--cCEEEEecccccccCCCCCCCCcc
Q 020608 77 --GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKA----LG--VKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++.. .+ .++||++||.++..+....
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~----- 183 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS----- 183 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC-----
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC-----
Confidence 679999999975331 24566788999999999988888633 32 4699999999766544321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
..|+.+|.+.+.+++.++.+ +|+++++++||.|.++..... ..+......
T Consensus 184 ----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-----------~~~~~~~~~ 236 (281)
T 4dry_A 184 ----------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM-----------STGVLQANG 236 (281)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTS
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh-----------cchhhhhhh
Confidence 44999999999999998876 589999999999998753211 000000001
Q ss_pred -CcCCCcccHHHHHHHHHHhhcCCCCCccE
Q 020608 221 -NFFMGSVHFKDVALAHILVYENPSACGRH 249 (323)
Q Consensus 221 -~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 249 (323)
.....++.++|+|++++.++..+......
T Consensus 237 ~~~~~~~~~pedvA~~v~fL~s~~~~~~i~ 266 (281)
T 4dry_A 237 EVAAEPTIPIEHIAEAVVYMASLPLSANVL 266 (281)
T ss_dssp CEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred cccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence 11123789999999999999987665443
No 246
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.94 E-value=1.2e-25 Score=189.54 Aligned_cols=221 Identities=16% Similarity=0.125 Sum_probs=155.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+ +.++.++.+|++|.++++++++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ--QLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH--HHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999988642221 222222 3468899999999998887765
Q ss_pred -CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++ ++.+ ++||++||.+++.+...
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~---------- 147 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ---------- 147 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCC----------
Confidence 579999999975432 134567889999999888777664 4456 89999999966554321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---C--CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---K--GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~--~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
...|+.+|.+.+.+++.++.+ . |++++++|||.+++|........ ..............+
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p-- 212 (253)
T 1hxh_A 148 -----------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNR-- 212 (253)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTTBT--
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch--hhhHHHHhhhhccCc--
Confidence 134999999999999888766 3 89999999999999752110000 000110111000011
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++..+. ..|+ +++.++
T Consensus 213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 247 (253)
T 1hxh_A 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 1237899999999999987543 3455 455443
No 247
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=1.4e-25 Score=188.81 Aligned_cols=205 Identities=14% Similarity=0.111 Sum_probs=148.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHH-HHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERET-AHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+..... +.+........++.++.+|++|.++++++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999999975332221 1111111112578899999999998887765
Q ss_pred --CCCEEEEcccCCccCC---CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVDK---VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.+++|++||.++..+...
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 154 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD---------- 154 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC----------
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC----------
Confidence 6899999999753322 23456789999999999999997 3345579999999976654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.++.. ... ... .+ ..
T Consensus 155 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------~~~--~~~--~~--~~ 206 (250)
T 3nyw_A 155 -----------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-----------KKA--GTP--FK--DE 206 (250)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----------HHT--TCC--SC--GG
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-----------hhc--CCC--cc--cc
Confidence 1449999999999999888774 89999999999977531 111 111 11 12
Q ss_pred CcccHHHHHHHHHHhhcCCCC
Q 020608 225 GSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~~~~ 245 (323)
.+++++|+|++++.++..+..
T Consensus 207 ~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 207 EMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp GSBCHHHHHHHHHHHHTSCTT
T ss_pred cCCCHHHHHHHHHHHHcCCCc
Confidence 378999999999999986654
No 248
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.94 E-value=3.6e-25 Score=186.45 Aligned_cols=217 Identities=18% Similarity=0.155 Sum_probs=157.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||++.||+++++.|+++|++|++.+|+.+. ..+..+++ +.+..++.+|++|+++++++++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~--l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV--LDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999997432 22333333 3478889999999999887765
Q ss_pred -CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 77 -GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
++|++|||||...... +.+.|...+++|+.++..+++++... .-+++|++||..+..+.+..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~----------- 170 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF----------- 170 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC-----------
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc-----------
Confidence 6799999999754322 45678999999999999999998543 13589999999776655421
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchh----HHHHHHHHcCCCCCccCc
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNAS----MLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~----~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.....+.+.++.++ |++++.|.||.+..|......... ......+...-| .+
T Consensus 171 ----------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~P----lg 236 (273)
T 4fgs_A 171 ----------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP----MG 236 (273)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHST----TS
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCC----CC
Confidence 349999999999999998775 899999999999988643221111 112222222221 11
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCccEEE
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGRHLC 251 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 251 (323)
+ +..++|+|.+++.|+.... -.|+.+.
T Consensus 237 R--~g~peeiA~~v~FLaSd~a~~iTG~~i~ 265 (273)
T 4fgs_A 237 R--VGRAEEVAAAALFLASDDSSFVTGAELF 265 (273)
T ss_dssp S--CBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred C--CcCHHHHHHHHHHHhCchhcCccCCeEe
Confidence 1 4579999999999997543 3555443
No 249
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.94 E-value=9.1e-25 Score=187.96 Aligned_cols=221 Identities=13% Similarity=0.032 Sum_probs=157.9
Q ss_pred CCCceEEEeccccH--HHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGC--IGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|++|||||+|+ ||++++++|+++|++|+++.|+.... +..+.+.....++.++.+|++|.++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK---KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH---HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH---HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 56789999999988 99999999999999999998873222 2222221112368899999999999888765
Q ss_pred ---CCCEEEEcccCCcc--------CCCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ---GCTGVFHLASPCIV--------DKVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++... ..++||++||.+++.+....
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~----- 180 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY----- 180 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT-----
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch-----
Confidence 68999999997631 2245677889999999999999998653 23599999999776554321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
..|+.||.+.+.+++.++.++ |+++++++||.+.++....... ............+.
T Consensus 181 ----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~--- 240 (293)
T 3grk_A 181 ----------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAPL--- 240 (293)
T ss_dssp ----------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-HHHHHHHHHHHSTT---
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCCC---
Confidence 449999999999999988774 8999999999999986443221 11222222222211
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 241 ---~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 241 ---RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence 226689999999999997533 3455 556443
No 250
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.94 E-value=2.1e-25 Score=187.86 Aligned_cols=209 Identities=18% Similarity=0.148 Sum_probs=151.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+++|++|||||+|+||++++++|+++|++|+++.|+.+.. ..+.++.+|++|.++++++++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEET 84 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999975331 136789999999998887765
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++.. .+.++||++||.++..+.+.
T Consensus 85 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------- 155 (253)
T 2nm0_A 85 HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG--------- 155 (253)
T ss_dssp TCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC---------
Confidence 479999999975432 25567889999999999999998643 35679999999855443210
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++...... ...........+ .
T Consensus 156 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p------~ 214 (253)
T 2nm0_A 156 ------------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DEQRANIVSQVP------L 214 (253)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------T
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HHHHHHHHhcCC------C
Confidence 034999999999999988876 4899999999999887533110 001111212111 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+++++|+|++++.++..+. ..|+ +.+.+
T Consensus 215 ~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG 247 (253)
T 2nm0_A 215 GRYARPEEIAATVRFLASDDASYITGAVIPVDG 247 (253)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence 237899999999999987543 2455 44543
No 251
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.94 E-value=3.6e-25 Score=190.25 Aligned_cols=218 Identities=17% Similarity=0.106 Sum_probs=155.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC-CcHHHHHHHhhcc-CCCCCeEEEEccCCC----HhHHHHHh
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL-SDERETAHLKALE-GADTRLRLFQIDLLD----YDAIAAAV 75 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~----~~~~~~~~ 75 (323)
++++|++|||||+|+||++++++|+++|++|++++|+. +... +..+.+. ..+.++.++.+|++| .+++++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV--SLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH--HHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH--HHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 45789999999999999999999999999999999975 2222 2222222 123578899999999 88887766
Q ss_pred c-------CCCEEEEcccCCccCC--------------CCCchhhhhhHHHHHHHHHHHHHhhC----C------cCEEE
Q 020608 76 T-------GCTGVFHLASPCIVDK--------------VEDPQNQLLNPAVKGTVNVLTAAKAL----G------VKRVV 124 (323)
Q Consensus 76 ~-------~~d~Vih~a~~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v 124 (323)
+ ++|+||||||...... ..+.+...+++|+.++.++++++... + .++||
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 5 7899999999754221 12345678999999999999987432 2 46999
Q ss_pred EecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCC
Q 020608 125 VTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTL 201 (323)
Q Consensus 125 ~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~ 201 (323)
++||.+++.+... ...|+.||.+.+.+.+.++.+. |+++++++||.+++|. . ..
T Consensus 178 ~isS~~~~~~~~~---------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~ 234 (288)
T 2x9g_A 178 NLCDAMVDQPCMA---------------------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG 234 (288)
T ss_dssp EECCTTTTSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC
T ss_pred EEecccccCCCCC---------------------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC
Confidence 9999866544321 1349999999999999888774 8999999999999997 3 11
Q ss_pred chhHHHHHHHHcCCCCCccCcCCCc-ccHHHHHHHHHHhhcCCC--CCccE-EEEc
Q 020608 202 NASMLMLLRLLQGCTDTYENFFMGS-VHFKDVALAHILVYENPS--ACGRH-LCVE 253 (323)
Q Consensus 202 ~~~~~~~~~~~~g~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~--~~~~~-~~~~ 253 (323)
. .....+....+. ..+ .+++|+|++++.++.... ..|++ ++.+
T Consensus 235 --~-~~~~~~~~~~p~------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 281 (288)
T 2x9g_A 235 --E-EEKDKWRRKVPL------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDG 281 (288)
T ss_dssp --H-HHHHHHHHTCTT------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --h-HHHHHHHhhCCC------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence 1 112222222211 124 689999999999997532 34554 4443
No 252
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.93 E-value=2.3e-25 Score=189.81 Aligned_cols=228 Identities=12% Similarity=0.049 Sum_probs=161.5
Q ss_pred CCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|+||||||+ |+||++++++|+++|++|++++|+.......+.+.+ ...++.++.+|++|.++++++++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA---EFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH---HcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999 999999999999999999999997433333222221 12357889999999999888776
Q ss_pred ---CCCEEEEcccCCccC---------CCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCc
Q 020608 77 ---GCTGVFHLASPCIVD---------KVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||..... ...+.+...+++|+.++.++++++... ..+++|++||.+++.+.+..
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 164 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY---- 164 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc----
Confidence 679999999976431 234567889999999999999998654 23589999999776554321
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.|.++..... ..............+
T Consensus 165 -----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~--- 223 (271)
T 3ek2_A 165 -----------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP--- 223 (271)
T ss_dssp -----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST---
T ss_pred -----------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC---
Confidence 449999999999999988764 89999999999999865432 111122222222221
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEE-cCccCHHHH
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCV-EAISHYGDF 261 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~-~~~~~~~e~ 261 (323)
...+.+++|+|++++.++.... ..|+ +++. +...++.++
T Consensus 224 ---~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 224 ---LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp ---TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred ---cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence 1226789999999999997532 3455 5665 334444443
No 253
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.93 E-value=2.2e-25 Score=187.25 Aligned_cols=210 Identities=20% Similarity=0.123 Sum_probs=151.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|+||||||+|+||++++++|+++|++|++++|+.+... ....+.+|++|.++++++++
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999764321 12247899999998887765
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.++||++||..++++...
T Consensus 79 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 149 (247)
T 1uzm_A 79 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN--------- 149 (247)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC---------
Confidence 679999999975421 2345678899999999999999874 355679999999966654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++...... ........... + .
T Consensus 150 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~----p--~ 208 (247)
T 1uzm_A 150 ------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---ERIQQGALQFI----P--A 208 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---HHHHHHHGGGC----T--T
T ss_pred ------------ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC---HHHHHHHHhcC----C--C
Confidence 134999999999999888876 4899999999999887421100 11111111111 1 1
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..+++++|+|++++.++.... ..|+ +++.++
T Consensus 209 ~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG 242 (247)
T 1uzm_A 209 KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242 (247)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence 237899999999999987532 2455 555443
No 254
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.93 E-value=9.7e-25 Score=186.79 Aligned_cols=220 Identities=12% Similarity=0.056 Sum_probs=160.9
Q ss_pred CCCceEEEeccccH--HHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGC--IGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|+||||||+|+ ||++++++|+++|++|++++|+. ..+..+.+ .....++.++.+|++|.++++++++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKL---CAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHH---HGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHH---HHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 56789999999966 99999999999999999999986 22222222 2222358899999999999888765
Q ss_pred ---CCCEEEEcccCCccC---------CCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCC
Q 020608 77 ---GCTGVFHLASPCIVD---------KVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPAD 141 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~ 141 (323)
++|+||||||..... ...+.+...+++|+.++.++++++... ..++||++||.+++.+....
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--- 176 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY--- 176 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT---
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc---
Confidence 579999999976431 344567789999999999999997542 24699999999766544321
Q ss_pred ccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCC
Q 020608 142 KVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDT 218 (323)
Q Consensus 142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~ 218 (323)
..|+.+|.+.+.+++.++.+ .|+++++++||.|.++....... ............+
T Consensus 177 ------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-- 235 (280)
T 3nrc_A 177 ------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVSP-- 235 (280)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHST--
T ss_pred ------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcCC--
Confidence 34999999999999988876 48999999999999986443221 1222222222221
Q ss_pred ccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 219 YENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 219 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 236 ----~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 236 ----LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp ----TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence 1226789999999999997533 3455 556543
No 255
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.93 E-value=5.9e-25 Score=188.52 Aligned_cols=215 Identities=23% Similarity=0.169 Sum_probs=156.7
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHH-----HHHHHhhccCCCCCeEEEEccCCCHhHHHHHh
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDER-----ETAHLKALEGADTRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..+.. ..+..+.+...+.++.++.+|++|.+++++++
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 6778899999999999999999999999999999999875311 11222222222457899999999999988876
Q ss_pred c-------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC----CcCEEEEecccccccCCCCCCC
Q 020608 76 T-------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL----GVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 76 ~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
+ ++|++|||||...... +.+.+...+++|+.++.++++++... +.++||++||..+..+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--- 161 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL--- 161 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC---
Confidence 6 7899999999764322 34567788999999999999998543 4579999999855543210
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCC-ccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGT-VMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~-v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
....|+.||.+.+.+++.++.+ .|+++++++||. +-.+ +.........
T Consensus 162 -----------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------~~~~~~~~~~ 213 (285)
T 3sc4_A 162 -----------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------AVQNLLGGDE 213 (285)
T ss_dssp -----------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------HHHHHHTSCC
T ss_pred -----------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------HHHhhccccc
Confidence 0144999999999999999887 489999999994 4332 1222222211
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCC-CCccEEE
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPS-ACGRHLC 251 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~ 251 (323)
....+..++|+|++++.++.... ..|+.+.
T Consensus 214 -----~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~ 244 (285)
T 3sc4_A 214 -----AMARSRKPEVYADAAYVVLNKPSSYTGNTLL 244 (285)
T ss_dssp -----CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred -----cccCCCCHHHHHHHHHHHhCCcccccceEEE
Confidence 11235689999999999998654 3445443
No 256
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.93 E-value=4.9e-25 Score=186.74 Aligned_cols=217 Identities=19% Similarity=0.158 Sum_probs=158.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
++++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+++. .++.++.+|++|.++++++++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL--LAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999987422 122222332 468899999999998887765
Q ss_pred --CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 --GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|+||||||...... ..+.+...+++|+.++.++++++...- .++||++||.+++ +...
T Consensus 78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~----------- 145 (263)
T 2a4k_A 78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG----------- 145 (263)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH-----------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC-----------
Confidence 5799999999754321 334567889999999999999986532 3699999998554 2210
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
...|+.+|...+.+.+.++.+ .|+++++++||.+.++...... ......+....+. ..
T Consensus 146 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p~------~~ 206 (263)
T 2a4k_A 146 ----------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---PWAWEQEVGASPL------GR 206 (263)
T ss_dssp ----------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---HHHHHHHHHTSTT------CS
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---HHHHHHHHhcCCC------CC
Confidence 134999999999998888766 4899999999999998643211 1122222222211 23
Q ss_pred cccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 226 SVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+.+++|+|++++.++.... ..|+ +++.++
T Consensus 207 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 207 AGRPEEVAQAALFLLSEESAYITGQALYVDGG 238 (263)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 6799999999999987542 3455 445443
No 257
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.93 E-value=8.4e-26 Score=189.55 Aligned_cols=212 Identities=20% Similarity=0.159 Sum_probs=155.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHH-CCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLE-RRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+||++|||||+|+||++++++|++ .|+.|++..|+.... ...+.++.+|++|.++++++++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 69 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKNV 69 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 789999988875311 2367889999999999988876
Q ss_pred CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhCCc--CEEEEecccccccCCCCCCCCccccCCCCC
Q 020608 77 GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKALGV--KRVVVTSSISSITPSPKWPADKVKDEDCWT 150 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~ 150 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++...-. +++|++||..++.+.+..
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------ 137 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS------------ 137 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB------------
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC------------
Confidence 689999999975432 24456788999999999999999866422 489999999666544321
Q ss_pred ChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchh--------HHHHHHHHcCCCCCc
Q 020608 151 DEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNAS--------MLMLLRLLQGCTDTY 219 (323)
Q Consensus 151 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~--------~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+++.++.+ +|+++++++||.+.+|......... ...........
T Consensus 138 ---------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 204 (244)
T 4e4y_A 138 ---------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF---- 204 (244)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS----
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC----
Confidence 34999999999999998875 4899999999999987432100000 00111111111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
....+.+++|+|++++.++.... ..|+ +++.+
T Consensus 205 --p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 239 (244)
T 4e4y_A 205 --PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG 239 (244)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence 11237799999999999997543 2455 45543
No 258
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.1e-25 Score=187.19 Aligned_cols=216 Identities=17% Similarity=0.075 Sum_probs=154.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+|++|||||+|+||++++++|+++| +.|++..|+..... +..+.+ +.++.++.+|++|.++++++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK--KLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH--HHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH--HHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999985 78888888642221 222222 2478899999999999888765
Q ss_pred -CCCEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++ ++.+ +++|++||.+++.+....
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~-------- 147 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSW-------- 147 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCS--------
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCc--------
Confidence 78999999997432 1244567889999999999999998 4444 799999999665543321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-CccEEEEcCCCccCCCCCCCCc------hhHHHHHHHHcCCCCCc
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIPPTLN------ASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~~~~~------~~~~~~~~~~~g~~~~~ 219 (323)
..|+.||.+.+.+.+.++.+. ++++++++||.+.+|....... ........+....+
T Consensus 148 -------------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 211 (254)
T 3kzv_A 148 -------------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE--- 211 (254)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---
T ss_pred -------------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---
Confidence 349999999999999999886 9999999999999986543211 01111222211111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC---CCccE-EEEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS---ACGRH-LCVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~-~~~~ 253 (323)
...+.+++|+|++++.++.... ..|++ ++.+
T Consensus 212 ---~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg 246 (254)
T 3kzv_A 212 ---NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND 246 (254)
T ss_dssp ---TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred ---cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence 1226789999999999987553 35554 4443
No 259
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.93 E-value=1.4e-25 Score=190.27 Aligned_cols=212 Identities=17% Similarity=0.144 Sum_probs=152.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +....+...+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE--KAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999998743222 2223333334578899999999998877665
Q ss_pred -CCCEEEEcccCC-cc----CCCCCchhhhhhHHHHHHHHHHHHHhh----CCcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -GCTGVFHLASPC-IV----DKVEDPQNQLLNPAVKGTVNVLTAAKA----LGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~~d~Vih~a~~~-~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||.. .. ....+.+...+++|+.++.++++++.. .+.++||++||..++.+.+..
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 154 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM-------- 154 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCC--------
Confidence 789999999975 21 124456788999999999999998743 345799999998766544311
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC------------CchhHH-HHHH
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT------------LNASML-MLLR 210 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~------------~~~~~~-~~~~ 210 (323)
..|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... ...... ....
T Consensus 155 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T 1zem_A 155 -------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ 221 (262)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHH
Confidence 34999999999998888765 489999999999987742110 000000 1111
Q ss_pred HHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 211 LLQGCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 211 ~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
+....+ . ..+..++|+|.+++.++...
T Consensus 222 ~~~~~p----~--~r~~~p~dvA~~v~~l~s~~ 248 (262)
T 1zem_A 222 MIGSVP----M--RRYGDINEIPGVVAFLLGDD 248 (262)
T ss_dssp HHHTST----T--SSCBCGGGSHHHHHHHHSGG
T ss_pred HHhcCC----C--CCCcCHHHHHHHHHHHcCch
Confidence 111111 1 12568999999999998753
No 260
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.93 E-value=3.8e-25 Score=186.37 Aligned_cols=211 Identities=18% Similarity=0.101 Sum_probs=155.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccC--CCHhHHHHHhc---
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDL--LDYDAIAAAVT--- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl--~~~~~~~~~~~--- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... ..++.++.+|+ +|.++++++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLR--QVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999753322 222222211 23678899999 88888877765
Q ss_pred ----CCCEEEEcccCCcc--C---CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ----GCTGVFHLASPCIV--D---KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~--~---~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+||||||.... + .+.+.+...+++|+.++.++++++ ++.+.++||++||..++.+....
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----- 162 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW----- 162 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC-----
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC-----
Confidence 68999999997422 1 134456789999999999999997 44556799999999766554321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhCC--ccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKG--LDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.||.+.+.+.+.++.+++ ++++.+.||.+.++.. .......
T Consensus 163 ----------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------~~~~~~~------ 209 (252)
T 3f1l_A 163 ----------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------ASAFPTE------ 209 (252)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------HHHCTTC------
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------hhhCCcc------
Confidence 3499999999999999998863 8999999999977531 1111111
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
....+.+++|+|.+++.++.... ..|+ +++.+
T Consensus 210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 244 (252)
T 3f1l_A 210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP 244 (252)
T ss_dssp CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence 01226689999999999987543 3455 55543
No 261
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.93 E-value=6e-25 Score=186.89 Aligned_cols=223 Identities=18% Similarity=0.127 Sum_probs=162.0
Q ss_pred CCCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHhHHHHHhc--
Q 020608 2 SKEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALE-GADTRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
++++|++|||||+ |+||++++++|+++|++|+++.|+...... +..+++. ..+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAE-ENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHH-HHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHH-HHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 4678999999999 999999999999999999999887654311 2222221 114578999999999999887765
Q ss_pred -----CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 -----GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 -----~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||...... +.+.+...+++|+.++.++++++ ++.+.+++|++||.++..+....
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----- 170 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ----- 170 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS-----
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC-----
Confidence 6799999999764322 44567889999999999999997 44455799999998666543210
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhCC--ccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKG--LDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
....|+.+|.+.+.+++.++.+++ ++++.+.||.+.++...... ...........+
T Consensus 171 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~----- 228 (267)
T 3gdg_A 171 --------------EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---KETQQLWHSMIP----- 228 (267)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---HHHHHHHHTTST-----
T ss_pred --------------CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---HHHHHHHHhcCC-----
Confidence 114499999999999999998864 79999999999987643221 112222222211
Q ss_pred cCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
...+.+++|+|.+++.++.... ..|+ +++.+
T Consensus 229 -~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 229 -MGRDGLAKELKGAYVYFASDASTYTTGADLLIDG 262 (267)
T ss_dssp -TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred -CCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence 1236689999999999997543 3455 45543
No 262
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.93 E-value=3.1e-25 Score=190.09 Aligned_cols=217 Identities=18% Similarity=0.117 Sum_probs=159.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+ +.++.++.+|++|.++++++++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~--~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK--ALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG 102 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999998743222 222233 3478999999999999888775
Q ss_pred CCCEEEEc-ccCCccC---------CCCCchhhhhhHHHHHHHHHHHHHhh----------CCcCEEEEecccccccCCC
Q 020608 77 GCTGVFHL-ASPCIVD---------KVEDPQNQLLNPAVKGTVNVLTAAKA----------LGVKRVVVTSSISSITPSP 136 (323)
Q Consensus 77 ~~d~Vih~-a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~v~~SS~~~~~~~~ 136 (323)
++|+|||+ |+..... ...+.+...+++|+.++.++++++.. .+.++||++||..++.+..
T Consensus 103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 182 (281)
T 3ppi_A 103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI 182 (281)
T ss_dssp EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence 57999999 5443221 12234688999999999999998742 2345999999997765543
Q ss_pred CCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHc
Q 020608 137 KWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQ 213 (323)
Q Consensus 137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~ 213 (323)
.. ..|+.+|.+.+.+++.++.+. |+++++++||.|.++...... ......+..
T Consensus 183 ~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~ 238 (281)
T 3ppi_A 183 GQ---------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG---EEALAKFAA 238 (281)
T ss_dssp TC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC---HHHHHHHHH
T ss_pred CC---------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc---HHHHHHHHh
Confidence 21 349999999999998888774 899999999999887433211 122233333
Q ss_pred CCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCcc-EEEEc
Q 020608 214 GCTDTYENFFMGSVHFKDVALAHILVYENPSACGR-HLCVE 253 (323)
Q Consensus 214 g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 253 (323)
..+.. ..+++++|+|++++.++......|+ +++.+
T Consensus 239 ~~~~~-----~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG 274 (281)
T 3ppi_A 239 NIPFP-----KRLGTPDEFADAAAFLLTNGYINGEVMRLDG 274 (281)
T ss_dssp TCCSS-----SSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred cCCCC-----CCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence 32211 2367999999999999987666676 45543
No 263
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.93 E-value=7.6e-25 Score=191.34 Aligned_cols=219 Identities=16% Similarity=0.082 Sum_probs=157.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEe-cCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHh-----------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATV-KNLSDERETAHLKALE-GADTRLRLFQIDLLDYD----------- 69 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~----------- 69 (323)
+++|++|||||+|+||++++++|+++|++|++++ |+..... +..+.+. ..+.++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN--ALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 121 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence 5678999999999999999999999999999999 7642222 2222222 12347889999999988
Q ss_pred ------HHHHHhc-------CCCEEEEcccCCccCC----C--------------CCchhhhhhHHHHHHHHHHHHHh--
Q 020608 70 ------AIAAAVT-------GCTGVFHLASPCIVDK----V--------------EDPQNQLLNPAVKGTVNVLTAAK-- 116 (323)
Q Consensus 70 ------~~~~~~~-------~~d~Vih~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~-- 116 (323)
+++++++ ++|+||||||...... . .+.+...+++|+.++.++++++.
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 201 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 201 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765 7899999999754321 2 34566789999999999999874
Q ss_pred --hCC------cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEE
Q 020608 117 --ALG------VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVV 185 (323)
Q Consensus 117 --~~~------~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ 185 (323)
+.+ .++||++||..++.+... ...|+.+|.+.+.+.+.++.+. |++++
T Consensus 202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~---------------------~~~Y~asKaal~~l~~~la~el~~~gIrvn 260 (328)
T 2qhx_A 202 VAGTPAKHRGTNYSIINMVDAMTNQPLLG---------------------YTIYTMAKGALEGLTRSAALELAPLQIRVN 260 (328)
T ss_dssp HHHSCGGGSCSCEEEEEECCTTTTSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHhcCCcCCCCCcEEEEECchhhccCCCC---------------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 334 579999999966554321 1349999999999999988774 89999
Q ss_pred EEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 186 VVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 186 ~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+++||.+.++. .. . ......+....+. + ..+.+++|+|++++.++.... ..|+ +++.++
T Consensus 261 ~v~PG~v~T~~-~~-~---~~~~~~~~~~~p~----~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 322 (328)
T 2qhx_A 261 GVGPGLSVLVD-DM-P---PAVWEGHRSKVPL----Y-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322 (328)
T ss_dssp EEEESSBSCCC-CS-C---HHHHHHHHTTCTT----T-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred EEecCcccCCc-cc-c---HHHHHHHHhhCCC----C-CCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 99999999987 22 1 1222233222211 1 136789999999999996432 3455 445443
No 264
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.93 E-value=4.6e-25 Score=183.38 Aligned_cols=198 Identities=16% Similarity=0.103 Sum_probs=145.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC----CE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC----TG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----d~ 80 (323)
||+||||||+|+||++++++|+++|++|++++|+.+.. .+....+ ..++.++.+|++|.++++++++.+ |+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL--STVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 57899999999999999999999999999999974222 2222233 347889999999999999988754 89
Q ss_pred EEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCCCCCChh
Q 020608 81 VFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEE 153 (323)
Q Consensus 81 Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~ 153 (323)
|||+||...... ..+.+...+++|+.++.++++++... ...++|++||..++.+....
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------------- 140 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE--------------- 140 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC---------------
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC---------------
Confidence 999999754322 44567889999999999999997543 12399999999766544321
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHH
Q 020608 154 YCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFK 230 (323)
Q Consensus 154 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~ 230 (323)
..|+.+|.+.+.+++.++.++ |++++.++||.+.++...... ... ....+++++
T Consensus 141 ------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~------~~~~~~~~~ 197 (230)
T 3guy_A 141 ------STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-----------KSL------DTSSFMSAE 197 (230)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHH
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-----------CCC------CcccCCCHH
Confidence 349999999999999998885 899999999999887532210 000 112367899
Q ss_pred HHHHHHHHhhcCCCC
Q 020608 231 DVALAHILVYENPSA 245 (323)
Q Consensus 231 D~a~~~~~~~~~~~~ 245 (323)
|+|++++.++..+..
T Consensus 198 dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 198 DAALMIHGALANIGN 212 (230)
T ss_dssp HHHHHHHHHCCEETT
T ss_pred HHHHHHHHHHhCcCC
Confidence 999999999875543
No 265
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.93 E-value=5.2e-25 Score=187.39 Aligned_cols=218 Identities=19% Similarity=0.154 Sum_probs=155.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+++... +..+.+ .++.++.+|++|.++++++++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR--ALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999998643221 122222 247889999999999888765
Q ss_pred -CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 -GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... .+.+.+...+++|+.++.++++++... +.+++|++||..+.++....
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 151 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA--------- 151 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC---------
Confidence 789999999975321 133457889999999999999997531 24799999998766654321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCC---CCchhHHHHHHHHcCCCCCccC
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPP---TLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~---~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
..|+.+|.+.+.+.+.++.+ +|+++++++||.+++|.... ........+.......+ .
T Consensus 152 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p----~ 215 (270)
T 1yde_A 152 ------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP----L 215 (270)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST----T
T ss_pred ------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC----C
Confidence 34999999999999998866 58999999999999974210 00001111111111111 1
Q ss_pred cCCCcccHHHHHHHHHHhhcCC-CCCcc-EEEEc
Q 020608 222 FFMGSVHFKDVALAHILVYENP-SACGR-HLCVE 253 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~-~~~~~-~~~~~ 253 (323)
..+.+++|+|.+++.++... ...|+ +.+.+
T Consensus 216 --~r~~~p~dva~~v~~L~s~~~~itG~~i~vdG 247 (270)
T 1yde_A 216 --GRMGQPAEVGAAAVFLASEANFCTGIELLVTG 247 (270)
T ss_dssp --SSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHcccCCCcCCCEEEECC
Confidence 12578999999999988642 23455 55644
No 266
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.93 E-value=7.6e-25 Score=183.14 Aligned_cols=213 Identities=20% Similarity=0.177 Sum_probs=152.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-------G 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 77 (323)
+|++|||||+|+||++++++|+++|++|++++|+.++ . .+.+ ++.++.+|++| ++++++++ +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~---~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--A---AQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--H---HHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--H---HHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999999997532 1 1122 26788999999 76665543 7
Q ss_pred CCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 78 CTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
+|+|||+||...... +.+.+...+++|+.++.++++++. +.+.+++|++||.+++.+... +
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------~ 139 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP-----------V 139 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------S
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-----------C
Confidence 899999999754321 345678899999999999999873 345689999999966553310 0
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCc
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGS 226 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 226 (323)
....|+.+|.+.+.+.+.++.+. |++++++|||.+.++..... .........+....+ . ..+
T Consensus 140 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p----~--~~~ 204 (239)
T 2ekp_A 140 --------PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-RQNPELYEPITARIP----M--GRW 204 (239)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHTTCT----T--SSC
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-ccCHHHHHHHHhcCC----C--CCC
Confidence 11449999999999999988774 89999999999998853210 000111222222111 1 236
Q ss_pred ccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 227 VHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 227 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
.+++|+|++++.++.... ..|+ +++.++
T Consensus 205 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 235 (239)
T 2ekp_A 205 ARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235 (239)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence 799999999999987532 2455 445443
No 267
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.93 E-value=1.9e-24 Score=182.54 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=161.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||++++++|+++|++|+++.++.. ....+....+...+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK-EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS-HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999998755432 22223333343335578899999999988877654
Q ss_pred -------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCcc
Q 020608 77 -------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 -------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||...... ..+.+...+++|+.++.++++++... +.+++|++||.+++.+.+..
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----- 158 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF----- 158 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB-----
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc-----
Confidence 2899999999754322 34456788999999999999998765 34599999999766544321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCcc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYE 220 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 220 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.++......... ..........+
T Consensus 159 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~---- 217 (255)
T 3icc_A 159 ----------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP-MMKQYATTISA---- 217 (255)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH-HHHHHHHHTST----
T ss_pred ----------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH-HHHHhhhccCC----
Confidence 349999999999999988774 899999999999998654322211 11112122211
Q ss_pred CcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 221 NFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 221 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
...+.+++|+|++++.++.... ..|+ +++.++
T Consensus 218 --~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (255)
T 3icc_A 218 --FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252 (255)
T ss_dssp --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred --cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence 1236789999999999986432 3455 555443
No 268
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.93 E-value=2.9e-24 Score=177.26 Aligned_cols=211 Identities=18% Similarity=0.101 Sum_probs=156.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc---CCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---GCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 80 (323)
++|++|||||++.||+++++.|+++|++|++.+|+.+.... ....++..+.+|++|+++++++++ ++|+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 68999999999999999999999999999999997643221 123578899999999999988876 6899
Q ss_pred EEEcccCCccC--CCCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCCCCCChhhh
Q 020608 81 VFHLASPCIVD--KVEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYC 155 (323)
Q Consensus 81 Vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 155 (323)
+|||||..... .+.+.|+..+++|+.++..+.+++... +-+++|++||..+..+.+..
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~----------------- 144 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR----------------- 144 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC-----------------
T ss_pred EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC-----------------
Confidence 99999975321 245678999999999999999887321 23699999999776654421
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHH
Q 020608 156 RQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDV 232 (323)
Q Consensus 156 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~ 232 (323)
..|+.||.....+.+.++.++ |++++.|.||.+..|....... .......+....|. + .+..++|+
T Consensus 145 ----~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~Pl----g--R~g~peei 213 (242)
T 4b79_A 145 ----PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTPL----A--RWGEAPEV 213 (242)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCTT----C--SCBCHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCCC----C--CCcCHHHH
Confidence 349999999999999888774 8999999999999986432211 12233333333221 1 14579999
Q ss_pred HHHHHHhhcCCC--CCccEE
Q 020608 233 ALAHILVYENPS--ACGRHL 250 (323)
Q Consensus 233 a~~~~~~~~~~~--~~~~~~ 250 (323)
|.+++.++.... -.|+.+
T Consensus 214 A~~v~fLaSd~a~~iTG~~l 233 (242)
T 4b79_A 214 ASAAAFLCGPGASFVTGAVL 233 (242)
T ss_dssp HHHHHHHTSGGGTTCCSCEE
T ss_pred HHHHHHHhCchhcCccCceE
Confidence 999999986543 245543
No 269
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.93 E-value=9.3e-25 Score=183.47 Aligned_cols=204 Identities=16% Similarity=0.150 Sum_probs=145.6
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------CC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-------GC 78 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 78 (323)
|++|||||+|+||++++++|+++|++|++++|+.+.. .+..+.+. .++.++.+|++|.++++++++ ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL--QELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999999864222 12222222 368899999999999998876 67
Q ss_pred CEEEEcccCCc-c----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 79 TGVFHLASPCI-V----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 79 d~Vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
|+||||||... . ..+.+.+...+++|+.++.++++++. +.+.++||++||.++..+...
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------ 143 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG------------ 143 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC------------
Confidence 99999999752 1 12445678899999999999999874 345679999999966544321
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCcc-CCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVM-GPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~-G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
...|+.+|...+.+++.++.+. |+++++++||.+. .|................ . ....
T Consensus 144 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~-------~--~~~~ 205 (248)
T 3asu_A 144 ---------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--QNTV 205 (248)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------C
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH-------H--hccC
Confidence 1349999999999999988774 8999999999999 564321000000000000 0 0112
Q ss_pred cccHHHHHHHHHHhhcCCC
Q 020608 226 SVHFKDVALAHILVYENPS 244 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~ 244 (323)
+++++|+|++++.++..+.
T Consensus 206 ~~~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 206 ALTPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp CBCHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHhcCCc
Confidence 4689999999999998643
No 270
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.93 E-value=1.2e-24 Score=185.21 Aligned_cols=206 Identities=17% Similarity=0.207 Sum_probs=145.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC-------C
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG-------C 78 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~ 78 (323)
|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+... .++.++.+|++|.++++++++. +
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ--ALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999743221 222223221 4688999999999999988764 5
Q ss_pred CEEEEcccCCcc-----CCCCCchhhhhhHHHHHHHHHHHHHh----hCCcC-EEEEecccccccCCCCCCCCccccCCC
Q 020608 79 TGVFHLASPCIV-----DKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVK-RVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 79 d~Vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
|+|||+||.... ..+.+.+...+++|+.++.++++++. +.+.+ +||++||..++.+...
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~----------- 167 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG----------- 167 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT-----------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC-----------
Confidence 999999997532 12345678899999999888887763 44556 9999999966544321
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
...|+.+|.+.+.+++.++.+ .|+++++++||.+.++................. . ...
T Consensus 168 ----------~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~-------~--~~~ 228 (272)
T 2nwq_A 168 ----------SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTY-------A--GAH 228 (272)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCC
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhh-------c--cCC
Confidence 134999999999999998876 389999999999998853211000000000000 0 112
Q ss_pred cccHHHHHHHHHHhhcCCC
Q 020608 226 SVHFKDVALAHILVYENPS 244 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~ 244 (323)
++.++|+|++++.++..+.
T Consensus 229 ~~~pedvA~~v~~l~s~~~ 247 (272)
T 2nwq_A 229 PIQPEDIAETIFWIMNQPA 247 (272)
T ss_dssp CBCHHHHHHHHHHHHTSCT
T ss_pred CCCHHHHHHHHHHHhCCCc
Confidence 4789999999999998643
No 271
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.93 E-value=7e-25 Score=181.28 Aligned_cols=219 Identities=19% Similarity=0.130 Sum_probs=160.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 80 (323)
+++|++|||||++.||+++++.|+++|++|++.+|+..+ +. .+.+...+.+..++.+|++|+++++++++ ++|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-~~---~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ET---LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HH---HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-HH---HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 689999999999999999999999999999999997542 22 22233335678999999999988887766 6899
Q ss_pred EEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCC-cCEEEEecccccccCCCCCCCCccccCCCCCC
Q 020608 81 VFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALG-VKRVVVTSSISSITPSPKWPADKVKDEDCWTD 151 (323)
Q Consensus 81 Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~ 151 (323)
+|||||..... .+.++|+..+++|+.++..+.+++. +.+ .+++|++||..+..+.+..
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~------------- 149 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV------------- 149 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC-------------
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC-------------
Confidence 99999976432 2566789999999999999998852 233 4699999999776654421
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCccc
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVH 228 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~ 228 (323)
..|+.||.....+.+.++.++ |++++.|.||.+..|..... .........+....| .+ .+..
T Consensus 150 --------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~-~~~~~~~~~~~~~~P----lg--R~g~ 214 (247)
T 4hp8_A 150 --------PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL-RADAARNKAILERIP----AG--RWGH 214 (247)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHTTCT----TS--SCBC
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc-ccCHHHHHHHHhCCC----CC--CCcC
Confidence 349999999999999888774 89999999999988753210 000111222222222 11 1457
Q ss_pred HHHHHHHHHHhhcCCC--CCccEEEEc
Q 020608 229 FKDVALAHILVYENPS--ACGRHLCVE 253 (323)
Q Consensus 229 v~D~a~~~~~~~~~~~--~~~~~~~~~ 253 (323)
++|+|.+++.|+.... ..|+.+..+
T Consensus 215 peeiA~~v~fLaSd~a~~iTG~~i~VD 241 (247)
T 4hp8_A 215 SEDIAGAAVFLSSAAADYVHGAILNVD 241 (247)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEEC
Confidence 8999999999987543 245544333
No 272
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.93 E-value=4e-25 Score=184.51 Aligned_cols=188 Identities=15% Similarity=0.152 Sum_probs=143.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
|++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|++|.++++++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999864321 135677899999988877664
Q ss_pred ---CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 ---GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++... ..+++|++||.+++.+...
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 139 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS--------- 139 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT---------
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC---------
Confidence 789999999975421 123456788999999999999998653 1359999999976654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-----CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-----GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...|+.+|.+.+.+++.++.+. |+++++++||.+.+|.. .......
T Consensus 140 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~------ 190 (236)
T 1ooe_A 140 ------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----------RKWMPNA------ 190 (236)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----------HHHSTTC------
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-----------hhcCCCc------
Confidence 1349999999999999998775 49999999999988631 1111110
Q ss_pred cCCCcccHHHHHHHHHHhh
Q 020608 222 FFMGSVHFKDVALAHILVY 240 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~ 240 (323)
....++.++|+|++++.++
T Consensus 191 ~~~~~~~~~dvA~~i~~~l 209 (236)
T 1ooe_A 191 DHSSWTPLSFISEHLLKWT 209 (236)
T ss_dssp CGGGCBCHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHH
Confidence 1123578899999998666
No 273
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.93 E-value=1.2e-24 Score=183.03 Aligned_cols=211 Identities=16% Similarity=0.106 Sum_probs=148.6
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCC-CHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLL-DYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~V 81 (323)
+++|+||||||+|+||++++++|+++|++|++++|+. . ..+.+ ....++ +|+. +.+.+.+.+.++|+|
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~---~~~~~----~~~~~~-~D~~~~~~~~~~~~~~iD~l 85 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---E---LLKRS----GHRYVV-CDLRKDLDLLFEKVKEVDIL 85 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---H---HHHHT----CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---H---HHHhh----CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence 5689999999999999999999999999999999864 1 12222 246667 9993 233333344489999
Q ss_pred EEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccCCCCCChh
Q 020608 82 FHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEE 153 (323)
Q Consensus 82 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~ 153 (323)
||+||..... ...+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 149 (249)
T 1o5i_A 86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN---------------- 149 (249)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC----------------
Confidence 9999975432 134567889999999988776654 4556689999999966654321
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHH-HHHcCCCCCccCcCCCcccH
Q 020608 154 YCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLL-RLLQGCTDTYENFFMGSVHF 229 (323)
Q Consensus 154 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~i~v 229 (323)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+++|....... .... .+....+ ...++++
T Consensus 150 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~p------~~~~~~~ 215 (249)
T 1o5i_A 150 -----LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQIP------MRRMAKP 215 (249)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTST------TSSCBCH
T ss_pred -----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcCC------CCCCcCH
Confidence 134999999999999988876 48999999999999986321000 1111 2222211 1237899
Q ss_pred HHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 230 KDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 230 ~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
+|+|++++.++.... ..|+ +++.++
T Consensus 216 ~dvA~~i~~l~s~~~~~~tG~~~~vdgG 243 (249)
T 1o5i_A 216 EEIASVVAFLCSEKASYLTGQTIVVDGG 243 (249)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 999999999987532 2355 556544
No 274
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.93 E-value=4.6e-24 Score=182.58 Aligned_cols=221 Identities=17% Similarity=0.074 Sum_probs=156.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..... +..... +.++.++.+|++|.++++++++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLR--ELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH--HHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999998643222 222222 3478999999999998877665
Q ss_pred ---CCCEEEEcccCCccCC-----C----CCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCC
Q 020608 77 ---GCTGVFHLASPCIVDK-----V----EDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPAD 141 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~~~-----~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~ 141 (323)
++|+||||||...... . .+.+...+++|+.++.++++++... +.+++|++||..++.+....
T Consensus 76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--- 152 (281)
T 3zv4_A 76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG--- 152 (281)
T ss_dssp HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC---
T ss_pred hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC---
Confidence 6799999999753211 1 1236778999999999999997432 12699999999776554321
Q ss_pred ccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCCccCCCCCCCCchhH-------HHHHHHH
Q 020608 142 KVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGTVMGPVIPPTLNASM-------LMLLRLL 212 (323)
Q Consensus 142 ~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~v~G~~~~~~~~~~~-------~~~~~~~ 212 (323)
..|+.||.+.+.+.+.++.+. .++++.++||.+.++.......... .....+.
T Consensus 153 ------------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (281)
T 3zv4_A 153 ------------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLK 214 (281)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHH
T ss_pred ------------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHH
Confidence 349999999999999998775 4999999999999985432110000 0111111
Q ss_pred cCCCCCccCcCCCcccHHHHHHHHHHhhcCCC---CCcc-EEEEc
Q 020608 213 QGCTDTYENFFMGSVHFKDVALAHILVYENPS---ACGR-HLCVE 253 (323)
Q Consensus 213 ~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~ 253 (323)
...+ ...+..++|+|.+++.++..+. ..|+ +++.+
T Consensus 215 ~~~p------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG 253 (281)
T 3zv4_A 215 SVLP------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDG 253 (281)
T ss_dssp HTCT------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred hcCC------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECC
Confidence 1111 1226689999999999998332 3455 44543
No 275
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.93 E-value=1.6e-25 Score=187.93 Aligned_cols=209 Identities=20% Similarity=0.131 Sum_probs=134.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHH---HHh--
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIA---AAV-- 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~-- 75 (323)
|++++|++|||||+|+||++++++|++ |++|++++|+... .+...+ ..++.++.+|+++.+..+ +.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~---~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH---LAALAE----IEGVEPIESDIVKEVLEEGGVDKLKN 72 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH---HHHHHT----STTEEEEECCHHHHHHTSSSCGGGTT
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH---HHHHHh----hcCCcceecccchHHHHHHHHHHHHh
Confidence 788899999999999999999999987 9999999986422 222222 236889999998875421 122
Q ss_pred -cCCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 76 -TGCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 76 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
.++|+|||+||...... +.+.+...+++|+.++.++++++. +.+ +++|++||..++.+....
T Consensus 73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-------- 143 (245)
T 3e9n_A 73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGN-------- 143 (245)
T ss_dssp CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------C--------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCc--------
Confidence 26899999999764322 234567889999999988888863 333 699999999666543321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.||.+.+.+++.++.+ .|+++++++||.+.++...... ...... .+ .
T Consensus 144 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~----~~--~ 197 (245)
T 3e9n_A 144 -------------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM-------DSQGTN----FR--P 197 (245)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------C--C
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh-------hhhhcc----cc--c
Confidence 34999999999999998876 4899999999999998543211 000000 11 1
Q ss_pred CCcccHHHHHHHHHHhhcCCCCCccEEEE
Q 020608 224 MGSVHFKDVALAHILVYENPSACGRHLCV 252 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 252 (323)
..+++++|+|++++.+++.+..+..+++.
T Consensus 198 ~~~~~p~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 198 EIYIEPKEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp GGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence 23789999999999999987766667754
No 276
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.93 E-value=8.9e-25 Score=186.39 Aligned_cols=214 Identities=18% Similarity=0.148 Sum_probs=154.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHH-----HHHHHhhccCCCCCeEEEEccCCCHhHHHHHh
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDER-----ETAHLKALEGADTRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (323)
|++++|++|||||+|+||++++++|+++|++|++++|+..+.. ..+....+...+.++.++.+|++|.+++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 6788999999999999999999999999999999999865311 11122222222457889999999999888776
Q ss_pred c-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCC
Q 020608 76 T-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 76 ~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
+ ++|+||||||..... ...+.+...+++|+.++.++++++. +.+.+++|++||.+++.+...
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--- 158 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW--- 158 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH---
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC---
Confidence 5 789999999975432 2345678899999999999999973 345579999999855443100
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCC-ccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGT-VMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~-v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
.....|+.||.+.+.+++.++.+. |+++++++||. +-.+... ...+.+
T Consensus 159 ----------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~------------~~~~~~ 210 (274)
T 3e03_A 159 ----------------GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN------------MLPGVD 210 (274)
T ss_dssp ----------------HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CCC
T ss_pred ----------------CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh------------hccccc
Confidence 011449999999999999988774 89999999994 5544321 111111
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCCCC--CccEEE
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENPSA--CGRHLC 251 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~ 251 (323)
...+..++|+|++++.++..... .|++.+
T Consensus 211 ------~~~~~~pedvA~~v~~l~s~~~~~itG~~i~ 241 (274)
T 3e03_A 211 ------AAACRRPEIMADAAHAVLTREAAGFHGQFLI 241 (274)
T ss_dssp ------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred ------ccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence 11256899999999999976443 456554
No 277
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.93 E-value=6.1e-24 Score=182.73 Aligned_cols=219 Identities=16% Similarity=0.096 Sum_probs=156.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEe-cCCCcHHHHHHHhhcc-CCCCCeEEEEccCCCHh----------
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATV-KNLSDERETAHLKALE-GADTRLRLFQIDLLDYD---------- 69 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~---------- 69 (323)
++++|++|||||+|+||++++++|+++|++|++++ |+..... +..+.+. ..+.++.++.+|++|.+
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN--ALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHH--HHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 36778999999999999999999999999999999 8643222 2222222 22357899999999998
Q ss_pred -------HHHHHhc-------CCCEEEEcccCCccCC----C--------------CCchhhhhhHHHHHHHHHHHHHh-
Q 020608 70 -------AIAAAVT-------GCTGVFHLASPCIVDK----V--------------EDPQNQLLNPAVKGTVNVLTAAK- 116 (323)
Q Consensus 70 -------~~~~~~~-------~~d~Vih~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~- 116 (323)
+++++++ ++|+||||||...... . .+.+...+++|+.++.++++++.
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8877765 7899999999754321 2 34567889999999999999874
Q ss_pred ---hCC------cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccE
Q 020608 117 ---ALG------VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDV 184 (323)
Q Consensus 117 ---~~~------~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~ 184 (323)
+.+ .++||++||..++.+.+. ...|+.+|.+.+.+.+.++.+ +|+++
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~---------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~v 222 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLG---------------------YTIYTMAKGALEGLTRSAALELAPLQIRV 222 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCCC---------------------CchhHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence 334 479999999966554321 134999999999999988876 38999
Q ss_pred EEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccE-EEEc
Q 020608 185 VVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRH-LCVE 253 (323)
Q Consensus 185 ~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~ 253 (323)
++++||.+.++. . .. ......+....+ .+ ..+..++|+|++++.++.... ..|+. ++.+
T Consensus 223 n~v~PG~v~T~~-~--~~--~~~~~~~~~~~p----~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 284 (291)
T 1e7w_A 223 NGVGPGLSVLVD-D--MP--PAVWEGHRSKVP----LY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 284 (291)
T ss_dssp EEEEESSBCCGG-G--SC--HHHHHHHHTTCT----TT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EEEeeCCccCCc-c--CC--HHHHHHHHhhCC----CC-CCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence 999999998876 3 11 122222222221 11 035689999999999997432 34554 4443
No 278
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.92 E-value=4e-25 Score=186.88 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=145.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC----CCE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG----CTG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~ 80 (323)
||+||||||+|+||++++++|+++|++|++++|+..+... . +.+|++|.+++++++++ +|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 5799999999999999999999999999999997643210 1 57999999999988864 599
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCC-CccccCCC-------
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPA-DKVKDEDC------- 148 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~-~~~~~e~~------- 148 (323)
||||||.... ...+...+++|+.++.++++++. +.+.++||++||.+++......+. .....+.+
T Consensus 66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 1fjh_A 66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence 9999997531 34588999999999999999985 445679999999966632210000 00000000
Q ss_pred ----CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccC
Q 020608 149 ----WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYEN 221 (323)
Q Consensus 149 ----~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~ 221 (323)
...+ ....|+.||.+.+.+++.++.+ .|+++++++||.+.++....... .......... +..
T Consensus 143 ~~~~~~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~----~~~ 211 (257)
T 1fjh_A 143 VEHAGEQG-----GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAK----FVP 211 (257)
T ss_dssp HHTCCTTH-----HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCC
T ss_pred hhcccCCC-----CccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHh----ccc
Confidence 0101 1145999999999999888766 58999999999999986432100 0001111110 001
Q ss_pred cCCCcccHHHHHHHHHHhhcCC--CCCcc-EEEEcC
Q 020608 222 FFMGSVHFKDVALAHILVYENP--SACGR-HLCVEA 254 (323)
Q Consensus 222 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 254 (323)
....+++++|+|++++.++..+ ...|+ +++.++
T Consensus 212 ~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 1123789999999999998764 23455 445443
No 279
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.92 E-value=1e-24 Score=183.66 Aligned_cols=197 Identities=14% Similarity=0.116 Sum_probs=150.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
++|+||||||+|+||++++++|+++|++|++++|+..+. .-..+.+|++|.++++++++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999986432 12357899999998887765
Q ss_pred CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 77 GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
++|+|||+||..... ...+.+...+++|+.++.++++++...- .++||++||..++.+....
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 155 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM----------- 155 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-----------
Confidence 469999999975322 1345567889999999999999986542 2489999999776544321
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHh-----CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKE-----KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFM 224 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 224 (323)
..|+.+|.+.+.+++.++.+ .++++++++||.+.++.. ....... ...
T Consensus 156 ----------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~------~~~ 208 (251)
T 3orf_A 156 ----------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------RKYMSDA------NFD 208 (251)
T ss_dssp ----------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------HHHCTTS------CGG
T ss_pred ----------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------hhhcccc------ccc
Confidence 34999999999999999887 479999999999987531 1111111 122
Q ss_pred CcccHHHHHHHHHHhhcC---CCCCcc-EEEE
Q 020608 225 GSVHFKDVALAHILVYEN---PSACGR-HLCV 252 (323)
Q Consensus 225 ~~i~v~D~a~~~~~~~~~---~~~~~~-~~~~ 252 (323)
.+++++|+|++++.++.. ....|+ +++.
T Consensus 209 ~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~ 240 (251)
T 3orf_A 209 DWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFE 240 (251)
T ss_dssp GSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred ccCCHHHHHHHHHHHhcCccccCCcceEEEEe
Confidence 377899999999999987 333455 5553
No 280
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.92 E-value=2.3e-23 Score=175.65 Aligned_cols=223 Identities=15% Similarity=0.130 Sum_probs=160.4
Q ss_pred CCCCCceEEEecccc--HHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccC-CCCCeEEEEccCCCHhHHHHHhc-
Q 020608 1 MSKEAEVVCVTGGSG--CIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEG-ADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
|++++|++|||||+| .||.++++.|+++|++|++.+|+....+... +.+.. ...++.++.+|++|+++++++++
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE--KLLEQLNQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--HHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence 678999999999876 8999999999999999999999764433322 22222 23478899999999998887665
Q ss_pred ------CCCEEEEcccCCccCC--------CCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCC
Q 020608 77 ------GCTGVFHLASPCIVDK--------VEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPA 140 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~ 140 (323)
++|++|||||...... ..+.+...+++|+.++..+..++... +-+++|++||.++..+.+..
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~-- 157 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY-- 157 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--
Confidence 6899999999753211 22345667789999999888887543 23599999999776654421
Q ss_pred CccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCC
Q 020608 141 DKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTD 217 (323)
Q Consensus 141 ~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~ 217 (323)
..|+.||...+.+.+.++.+ +|++++.|.||.+..|...... ........+....|.
T Consensus 158 -------------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl 217 (256)
T 4fs3_A 158 -------------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAPL 217 (256)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHSTT
T ss_pred -------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCCC
Confidence 34999999999999988877 4899999999999988654322 122233333332221
Q ss_pred CccCcCCCcccHHHHHHHHHHhhcCCC--CCccEEEEc
Q 020608 218 TYENFFMGSVHFKDVALAHILVYENPS--ACGRHLCVE 253 (323)
Q Consensus 218 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~ 253 (323)
+ .+..++|+|.+++.++.... ..|+.+..+
T Consensus 218 ----~--R~g~peevA~~v~fL~Sd~a~~iTG~~i~VD 249 (256)
T 4fs3_A 218 ----K--RNVDQVEVGKTAAYLLSDLSSGVTGENIHVD 249 (256)
T ss_dssp ----S--SCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred ----C--CCcCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence 1 24579999999999997533 345544333
No 281
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.92 E-value=5.8e-24 Score=186.63 Aligned_cols=214 Identities=18% Similarity=0.130 Sum_probs=156.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHH-----HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDER-----ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+..+.. .....+.+...+.++.++.+|++|.++++++++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999875421 112222233334578899999999999888776
Q ss_pred ------CCCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCc
Q 020608 77 ------GCTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADK 142 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~ 142 (323)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||..++.+...
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~----- 197 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF----- 197 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT-----
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC-----
Confidence 7899999999764322 34567889999999999999998 4445679999999865543110
Q ss_pred cccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC--CccEEEEcCCC-ccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 143 VKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK--GLDVVVVNPGT-VMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 143 ~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~Rp~~-v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
.....|+.+|.+.+.+++.++.+. +++++++.||. +..+ .... ..+...
T Consensus 198 --------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-----------~~~~-~~~~~~-- 249 (346)
T 3kvo_A 198 --------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-----------AMDM-LGGPGI-- 249 (346)
T ss_dssp --------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-----------HHHH-HCC--C--
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-----------HHHh-hccccc--
Confidence 011459999999999999998875 89999999996 4332 1111 111110
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCC-CCccEEEE
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPS-ACGRHLCV 252 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~ 252 (323)
...+..++|+|++++.++.... ..|++.+.
T Consensus 250 ---~~r~~~pedvA~~v~~L~s~~~~itG~~ivd 280 (346)
T 3kvo_A 250 ---ESQCRKVDIIADAAYSIFQKPKSFTGNFVID 280 (346)
T ss_dssp ---GGGCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred ---cccCCCHHHHHHHHHHHHhcCCCCCceEEEC
Confidence 1125688999999999998722 35666543
No 282
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.92 E-value=3e-24 Score=184.37 Aligned_cols=203 Identities=16% Similarity=0.068 Sum_probs=148.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCHhHHHHHhc-----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+.+.... ..+.+... ..++.++.+|++|.++++++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK--VVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--HHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999997533221 11222111 2368899999999988887765
Q ss_pred --CCCEEEEc-ccCCccCC---CCCchhhhhhHHHHHHHHHHHHHhhC---CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHL-ASPCIVDK---VEDPQNQLLNPAVKGTVNVLTAAKAL---GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~-a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+|||+ |+....+. +.+.+...+++|+.++.++++++... +.++||++||.+++.+.+.
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 173 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM---------- 173 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT----------
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC----------
Confidence 78999999 56543221 23456778999999999999987432 2369999999866544321
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-----CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-----GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
...|+.||.+.+.+++.++.+. ++++++++||.+.++... ....+ ..
T Consensus 174 -----------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~------~~ 225 (286)
T 1xu9_A 174 -----------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSG------IV 225 (286)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCG------GG
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhccc------cc
Confidence 1449999999999998887654 899999999999775311 11111 11
Q ss_pred CCCcccHHHHHHHHHHhhcCCCC
Q 020608 223 FMGSVHFKDVALAHILVYENPSA 245 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~~ 245 (323)
...+++++|+|+.++.+++.+..
T Consensus 226 ~~~~~~~~~vA~~i~~~~~~~~~ 248 (286)
T 1xu9_A 226 HMQAAPKEECALEIIKGGALRQE 248 (286)
T ss_dssp GGGCBCHHHHHHHHHHHHHTTCS
T ss_pred cCCCCCHHHHHHHHHHHHhcCCc
Confidence 13367899999999999886543
No 283
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.92 E-value=6.3e-24 Score=178.46 Aligned_cols=201 Identities=16% Similarity=0.117 Sum_probs=149.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccC--CCHhHHHHHhc---
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDL--LDYDAIAAAVT--- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl--~~~~~~~~~~~--- 76 (323)
+++|++|||||+|+||++++++|+++|++|++++|+..... +..+.+... ..+..++.+|+ ++.+++.++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLA--EVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHH--HHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999753322 222222221 24567777777 88888777654
Q ss_pred ----CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ----GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ----~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|+|||+||..... .+.+.+...+++|+.++.++++++ ++.+.+++|++||..+..+....
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----- 164 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW----- 164 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC-----
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc-----
Confidence 789999999975321 144567889999999999999998 44556799999998666544321
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh----CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCc
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE----KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTY 219 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~ 219 (323)
..|+.+|.+.+.+++.++.+ .+++++.++||.+.++.. .......
T Consensus 165 ----------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------~~~~~~~---- 213 (247)
T 3i1j_A 165 ----------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------AQAYPDE---- 213 (247)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------HHHSTTS----
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------hhccccc----
Confidence 34999999999999988876 479999999999977521 1111111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCC
Q 020608 220 ENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
....+..++|+|.+++.++...
T Consensus 214 --~~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 214 --NPLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp --CGGGSCCGGGGTHHHHHHHSGG
T ss_pred --CccCCCCHHHHHHHHHHHhCch
Confidence 1122567899999999998743
No 284
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.92 E-value=8.9e-24 Score=178.88 Aligned_cols=215 Identities=17% Similarity=0.121 Sum_probs=147.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
+|++|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+...+.++.++.+|++|.++++++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLR--VVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999998743222 2222222223468899999999988776543
Q ss_pred ---CCCEEEEcccC--C--------c-cCCCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCC
Q 020608 77 ---GCTGVFHLASP--C--------I-VDKVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKW 138 (323)
Q Consensus 77 ---~~d~Vih~a~~--~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~ 138 (323)
++|+||||||. . . .....+.+...+++|+.++.++.+++. +.+.++||++||.+++.+..
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 157 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF-- 157 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS--
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC--
Confidence 57999999942 1 1 112456678899999999988877753 44567999999985543211
Q ss_pred CCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC
Q 020608 139 PADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC 215 (323)
Q Consensus 139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~ 215 (323)
...|+.||.+.+.+.+.++.+ +|+++++++||.+.++...................
T Consensus 158 --------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~- 216 (260)
T 2qq5_A 158 --------------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ- 216 (260)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------------
T ss_pred --------------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH-
Confidence 134999999999999988865 48999999999999986432110000000000000
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
...+. ..+..++|+|++++.++....
T Consensus 217 -~~~~~--~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 217 -FKSAF--SSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp --------CHHHHHHHHHHHHHHHHTCTT
T ss_pred -HHhhh--ccCCCHHHHHHHHHHHhcCcc
Confidence 00000 013579999999999998653
No 285
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.92 E-value=8.2e-24 Score=177.91 Aligned_cols=216 Identities=19% Similarity=0.172 Sum_probs=154.0
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
|++++|++|||||++.||++++++|+++|++|++.+|+..+. ..+..++.+|+++.++++++++
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQ 74 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999975321 1133468899999998887665
Q ss_pred ---CCCEEEEcccCCcc------CCCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCcc
Q 020608 77 ---GCTGVFHLASPCIV------DKVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKV 143 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~ 143 (323)
++|++|||||.... ..+.++|...+++|+.++..+.+++ ++.+-+++|++||..+..+.+..
T Consensus 75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~----- 149 (261)
T 4h15_A 75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES----- 149 (261)
T ss_dssp HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-----
T ss_pred HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-----
Confidence 68999999996432 1245678899999999999998886 33455799999998665543210
Q ss_pred ccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCC---------C--chhHHHHH
Q 020608 144 KDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPT---------L--NASMLMLL 209 (323)
Q Consensus 144 ~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~---------~--~~~~~~~~ 209 (323)
...|+.||.+.+.+.+.++.+ +|++++.|.||.+..|..... . ......+.
T Consensus 150 ---------------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (261)
T 4h15_A 150 ---------------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIM 214 (261)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHH
Confidence 134999999999999988877 489999999999987642100 0 00001111
Q ss_pred HHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 210 RLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 210 ~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
..... .|-+ .+..++|+|.+++.++.... ..|+ +.+.++
T Consensus 215 ~~~~~----~Plg--R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG 256 (261)
T 4h15_A 215 DGLGG----IPLG--RPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256 (261)
T ss_dssp HHTTC----CTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhcC----CCCC--CCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence 11111 1111 25689999999999986433 2455 445444
No 286
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.92 E-value=2.6e-24 Score=180.14 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=149.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (323)
++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|++|.++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999864321 135678899999998887765
Q ss_pred --CCCEEEEcccCCccC-----CCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCC
Q 020608 77 --GCTGVFHLASPCIVD-----KVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDED 147 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~ 147 (323)
++|+||||||..... ...+.+...+++|+.++.++++++... ..++||++||.+++.+....
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 144 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM--------- 144 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB---------
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCc---------
Confidence 689999999975421 123456788999999999999998653 12599999999766543211
Q ss_pred CCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-----CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCc
Q 020608 148 CWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-----GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENF 222 (323)
Q Consensus 148 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (323)
..|+.+|.+.+.+++.++.+. |+++++++||.+.++.. ....... .
T Consensus 145 ------------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~~------~ 195 (241)
T 1dhr_A 145 ------------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPEA------D 195 (241)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTTS------C
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------cccCcch------h
Confidence 349999999999999988764 59999999999977531 1110110 1
Q ss_pred CCCcccHHHHHHHHHHhhcCCC--CCcc-EEEE
Q 020608 223 FMGSVHFKDVALAHILVYENPS--ACGR-HLCV 252 (323)
Q Consensus 223 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~ 252 (323)
...++.++|+|++++.++.... ..|+ +.+.
T Consensus 196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~ 228 (241)
T 1dhr_A 196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV 228 (241)
T ss_dssp GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred hccCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence 1225788999999999997543 2455 4453
No 287
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.91 E-value=2.6e-23 Score=181.49 Aligned_cols=223 Identities=23% Similarity=0.222 Sum_probs=153.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHH-HHhhc---cCCCCCeEEEEccCCCHhHHHHHhcC--
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETA-HLKAL---EGADTRLRLFQIDLLDYDAIAAAVTG-- 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~-- 77 (323)
++|+||||||+|+||++++++|+++|++|+++.|+..+..... ..... .....++.++.+|++|.++++++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 3689999999999999999999999999988887654433222 12111 11234789999999999999998874
Q ss_pred ---CCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 78 ---CTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 78 ---~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
+|+||||||..... .+.+.+...+++|+.++.++++++ ++.+.++||++||.+++.+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~--------- 151 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF--------- 151 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT---------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC---------
Confidence 89999999975332 134567889999999999999996 3445679999999966654321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhH-----------HHHHHHH
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASM-----------LMLLRLL 212 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~-----------~~~~~~~ 212 (323)
...|+.||.+.+.+++.++.+ +|+++++|+||.|.++.......... ..+....
T Consensus 152 ------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (327)
T 1jtv_A 152 ------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL 219 (327)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHH
T ss_pred ------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHH
Confidence 134999999999999998875 58999999999999886432111000 0000000
Q ss_pred cCCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCccEE
Q 020608 213 QGCTDTYENFFMGSVHFKDVALAHILVYENPSACGRHL 250 (323)
Q Consensus 213 ~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 250 (323)
.......+ ...++++|+|++++.++..+.....|.
T Consensus 220 ~~~~~~~~---~~~~~pedvA~~i~~l~~~~~~~~~~~ 254 (327)
T 1jtv_A 220 AHSKQVFR---EAAQNPEEVAEVFLTALRAPKPTLRYF 254 (327)
T ss_dssp HHHHHHHH---HHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHhhh---hcCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence 00000000 002479999999999998654433444
No 288
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.91 E-value=8.1e-24 Score=179.05 Aligned_cols=212 Identities=16% Similarity=0.069 Sum_probs=150.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHH---CCCEEEEEecCCCcHHHHHHHhhccC--CCCCeEEEEccCCCHhHHHHHhc
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLE---RRYTVHATVKNLSDERETAHLKALEG--ADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
++++|++|||||+|+||++++++|++ +|++|++++|+.+... +..+.+.. .+.++.++.+|++|.++++++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR--QLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH--HHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHH--HHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence 35789999999999999999999999 8999999999753222 22222221 13468899999999998877653
Q ss_pred ---------CCC--EEEEcccCCcc--C-----CCCCchhhhhhHHHHHHHHHHHHHhhC------CcCEEEEecccccc
Q 020608 77 ---------GCT--GVFHLASPCIV--D-----KVEDPQNQLLNPAVKGTVNVLTAAKAL------GVKRVVVTSSISSI 132 (323)
Q Consensus 77 ---------~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~~~ 132 (323)
++| +||||||.... . .+.+.+...+++|+.++.++++++... +.++||++||.+++
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 358 99999997532 1 234567889999999999999998542 34689999999666
Q ss_pred cCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-CccEEEEcCCCccCCCCCCCCc--hhHHHHH
Q 020608 133 TPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIPPTLN--ASMLMLL 209 (323)
Q Consensus 133 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~~~~~--~~~~~~~ 209 (323)
.+.+. ...|+.||.+.+.+.+.++.+. ++++++++||.+.++....... .......
T Consensus 161 ~~~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 219 (259)
T 1oaa_A 161 QPYKG---------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRS 219 (259)
T ss_dssp SCCTT---------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHH
T ss_pred CCCCC---------------------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHH
Confidence 54321 1349999999999999999886 5999999999997763210000 0000011
Q ss_pred HHHcCCCCCccCcCCCcccHHHHHHHHHHhhcC
Q 020608 210 RLLQGCTDTYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 210 ~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
.+... .+ ...+.+++|+|++++.++..
T Consensus 220 ~~~~~----~p--~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 220 KLQKL----KS--DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHH----HH--TTCSBCHHHHHHHHHHHHHH
T ss_pred HHHHh----hh--cCCcCCHHHHHHHHHHHHhh
Confidence 11100 00 12267899999999999864
No 289
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.91 E-value=9.5e-24 Score=178.07 Aligned_cols=218 Identities=11% Similarity=0.018 Sum_probs=147.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHH----HhcCCCE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAA----AVTGCTG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~~~~d~ 80 (323)
||++|||||+|+||++++++|+++|++|++++|+.+.......+.. .+.++..+ |..+.+.+.+ .+.++|+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~---~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---TYPQLKPM--SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---HCTTSEEC--CCCSHHHHHHHHHHHHSCCCE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCcEEEE--CHHHHHHHHHHHHHHhCCCCE
Confidence 5799999999999999999999999999999997654433222211 12244443 5555433222 2347999
Q ss_pred EEEcccCC-ccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCCCCC
Q 020608 81 VFHLASPC-IVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTD 151 (323)
Q Consensus 81 Vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~ 151 (323)
||||||.. ... .+.+.+...+++|+.++.++++++. +.+.++||++||..++.+...
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 141 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-------------- 141 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC--------------
Confidence 99999975 221 1345678899999999999999873 344579999999866554321
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhH-----HHHHHHHcCCCCCccCcC
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASM-----LMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~ 223 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.++||.......... .....+.... + .
T Consensus 142 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~----p--~ 208 (254)
T 1zmt_A 142 -------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT----A--L 208 (254)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS----S--S
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC----C--C
Confidence 1349999999999999988764 8999999999998886443221110 1111111111 1 1
Q ss_pred CCcccHHHHHHHHHHhhcCCCC--Ccc-EEEEcC
Q 020608 224 MGSVHFKDVALAHILVYENPSA--CGR-HLCVEA 254 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 254 (323)
..+.+++|+|++++.++..... .|+ +++.++
T Consensus 209 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG 242 (254)
T 1zmt_A 209 QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 242 (254)
T ss_dssp SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 1267899999999999976442 455 445443
No 290
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.90 E-value=8.9e-23 Score=185.10 Aligned_cols=216 Identities=17% Similarity=0.071 Sum_probs=154.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
+++|++|||||+|+||.+++++|+++|++|++++|+.......+..... +.+++.+|++|.++++++++
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999998864332222222222 46789999999998887765
Q ss_pred -C-CCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC----CcCEEEEecccccccCCCCCCCCccccC
Q 020608 77 -G-CTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL----GVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 77 -~-~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
+ +|+||||||..... .+.+.+...+++|+.++.++.+++... +.++||++||.+++.+....
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~-------- 357 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ-------- 357 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC--------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC--------
Confidence 3 89999999976432 245567889999999999999998765 55799999999877765432
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcC
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFF 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 223 (323)
..|+.+|...+.+++.++.+ .|+++++++||.+.++.............. ... ..
T Consensus 358 -------------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~------~l 415 (454)
T 3u0b_A 358 -------------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGR---RLN------SL 415 (454)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHH---HSB------TT
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHH---hhc------cc
Confidence 34999999888888887765 489999999999998864321100000111 100 11
Q ss_pred CCcccHHHHHHHHHHhhcCCC--CCcc-EEEEc
Q 020608 224 MGSVHFKDVALAHILVYENPS--ACGR-HLCVE 253 (323)
Q Consensus 224 ~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 253 (323)
..+..++|+|+++..++.... ..|+ +++.+
T Consensus 416 ~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdG 448 (454)
T 3u0b_A 416 FQGGQPVDVAELIAYFASPASNAVTGNTIRVCG 448 (454)
T ss_dssp SSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESS
T ss_pred cCCCCHHHHHHHHHHHhCCccCCCCCcEEEECC
Confidence 124679999999999987433 3455 44544
No 291
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.90 E-value=1.4e-22 Score=176.06 Aligned_cols=210 Identities=16% Similarity=0.150 Sum_probs=149.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCC-CCCeEEEEccCCCH-hHHHHHhc----
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGA-DTRLRLFQIDLLDY-DAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-~~~~~~~~---- 76 (323)
+++|+||||||+|+||++++++|+++|++|++++|+..+. .+..+.+... ..++.++.+|++|. +.++++++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG--HEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999975332 2333333332 34789999999998 77666554
Q ss_pred ---CCCEEEEcccCCcc----------------------------------CCCCCchhhhhhHHHHHHHHHHHHHh---
Q 020608 77 ---GCTGVFHLASPCIV----------------------------------DKVEDPQNQLLNPAVKGTVNVLTAAK--- 116 (323)
Q Consensus 77 ---~~d~Vih~a~~~~~----------------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~--- 116 (323)
++|+||||||.... ....+.+...+++|+.|+.++++++.
T Consensus 88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 167 (311)
T 3o26_A 88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL 167 (311)
T ss_dssp HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence 78999999997532 11334456779999999999998873
Q ss_pred -hCCcCEEEEecccccccCCCCCCC----------------------------CccccCCCCCChhhhccCCCchHHHHH
Q 020608 117 -ALGVKRVVVTSSISSITPSPKWPA----------------------------DKVKDEDCWTDEEYCRQNEIWYPLSKT 167 (323)
Q Consensus 117 -~~~~~~~v~~SS~~~~~~~~~~~~----------------------------~~~~~e~~~~~~~~~~~~~~~Y~~sK~ 167 (323)
+.+.++||++||..+..+...... .....+..+. .....|+.||.
T Consensus 168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~SK~ 241 (311)
T 3o26_A 168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWP------SFGAAYTTSKA 241 (311)
T ss_dssp TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCC------SSCHHHHHHHH
T ss_pred ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCc------ccchhhHHHHH
Confidence 345579999999977654321000 0000011111 11245999999
Q ss_pred HHHHHHHHHHHhC-CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC
Q 020608 168 LAEKAAWEFAKEK-GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS 244 (323)
Q Consensus 168 ~~e~~~~~~~~~~-~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 244 (323)
+.+.+++.++.++ ++++++++||.|.++..... ....+++.++.++.++..+.
T Consensus 242 a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~a~~~~~~~~~~~ 295 (311)
T 3o26_A 242 CLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGI------------------------GNYTAEEGAEHVVRIALFPD 295 (311)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTTC------------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHhhcCCceEEEecCCceecCCcCCC------------------------CCCCHHHHHHHHHHHHhCCC
Confidence 9999999999886 79999999999988753211 11367899999998876543
No 292
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.90 E-value=5.8e-23 Score=188.00 Aligned_cols=226 Identities=18% Similarity=0.196 Sum_probs=163.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCE-EEEEecCCCcHH-HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC---
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYT-VHATVKNLSDER-ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC--- 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 78 (323)
.++++|||||+|+||.+++++|+++|++ |++++|+..+.. ..+....+...+.++.++.+|++|.+++.++++.+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999995 999999764221 11222233333457899999999999999988765
Q ss_pred ---CEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCC
Q 020608 79 ---TGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTD 151 (323)
Q Consensus 79 ---d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~ 151 (323)
|+|||+||..... .+.+.+...+++|+.|+.++.++++..+.++||++||.+++++....
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~------------- 371 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------------- 371 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-------------
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC-------------
Confidence 9999999975432 23456678899999999999999988888999999999777765432
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHH
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKD 231 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D 231 (323)
..|+.+|...+.+...+. ..|+++++|+||.+++++..... .... +....+.+++++|
T Consensus 372 --------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~-----~~~~--------~~~~g~~~i~~e~ 429 (486)
T 2fr1_A 372 --------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGP-----VADR--------FRRHGVIEMPPET 429 (486)
T ss_dssp --------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHH
T ss_pred --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchh-----HHHH--------HHhcCCCCCCHHH
Confidence 349999999998887765 56999999999999887532110 0000 1112234789999
Q ss_pred HHHHHHHhhcCCCCCccEEEEcCccCHHHHHHHHHHH
Q 020608 232 VALAHILVYENPSACGRHLCVEAISHYGDFVAKVAEL 268 (323)
Q Consensus 232 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~ 268 (323)
+++++..++..... .+.+.+ +.|..+...+...
T Consensus 430 ~a~~l~~~l~~~~~--~~~v~~--~d~~~~~~~~~~~ 462 (486)
T 2fr1_A 430 ACRALQNALDRAEV--CPIVID--VRWDRFLLAYTAQ 462 (486)
T ss_dssp HHHHHHHHHHTTCS--SCEECE--ECHHHHHHHHTSS
T ss_pred HHHHHHHHHhCCCC--eEEEEe--CCHHHHhhhhccc
Confidence 99999999986543 233322 4567666655443
No 293
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.90 E-value=4e-23 Score=175.72 Aligned_cols=217 Identities=14% Similarity=0.061 Sum_probs=151.7
Q ss_pred CCCceEEEecc--ccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 3 KEAEVVCVTGG--SGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 3 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++|++||||| +|+||++++++|+++|++|++++|+..+. ..+..+.+ +.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL-IQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH-HHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH-HHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 56789999999 99999999999999999999999875221 11222222 3367889999999998888766
Q ss_pred ------CCCEEEEcccCCcc---------CCCCCchhhhhhHHHHHHHHHHHHHhhCC--cCEEEEecccccccCCCCCC
Q 020608 77 ------GCTGVFHLASPCIV---------DKVEDPQNQLLNPAVKGTVNVLTAAKALG--VKRVVVTSSISSITPSPKWP 139 (323)
Q Consensus 77 ------~~d~Vih~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~ 139 (323)
++|+||||||.... ..+.+.+...+++|+.++.++++++...- .++||++||.+. ++.+.
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~-- 157 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPA-- 157 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTT--
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCc--
Confidence 78999999997541 12345677889999999999999986531 259999999743 22211
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCC-----CchhH----HH
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPT-----LNASM----LM 207 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~-----~~~~~----~~ 207 (323)
...|+.+|.+.+.+.+.++.+. |+++++++||.+.++..... ..... ..
T Consensus 158 -------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 218 (269)
T 2h7i_A 158 -------------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL 218 (269)
T ss_dssp -------------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHH
T ss_pred -------------------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHH
Confidence 1349999999999999888764 89999999999987632100 00000 00
Q ss_pred HHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccEE
Q 020608 208 LLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRHL 250 (323)
Q Consensus 208 ~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~ 250 (323)
........ +.+ +.+..++|+|.+++.++.... ..|+.+
T Consensus 219 ~~~~~~~~----p~~-rr~~~p~dvA~~v~~L~s~~~~~itG~~i 258 (269)
T 2h7i_A 219 EEGWDQRA----PIG-WNMKDATPVAKTVCALLSDWLPATTGDII 258 (269)
T ss_dssp HHHHHHHC----TTC-CCTTCCHHHHHHHHHHHSSSCTTCCSEEE
T ss_pred HHhhhccC----Ccc-cCCCCHHHHHHHHHHHhCchhccCcceEE
Confidence 11111111 111 125678999999999997543 245543
No 294
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.89 E-value=1.9e-22 Score=175.28 Aligned_cols=211 Identities=15% Similarity=0.081 Sum_probs=147.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC-------CcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL-------SDERETAHLKALEGADTRLRLFQIDLLDYDAIAA 73 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 73 (323)
|++++|++|||||+|+||++++++|+++|++|++.+|.. +........+.+..... ...+|+++.+++++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEK 81 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHH
Confidence 456789999999999999999999999999999976531 12222222223322111 13589999887665
Q ss_pred Hhc-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCCCC
Q 020608 74 AVT-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSPKW 138 (323)
Q Consensus 74 ~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~ 138 (323)
+++ ++|+||||||..... .+.+.+...+++|+.|+.++++++ ++.+.++||++||.++.++....
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~ 161 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ 161 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC
Confidence 543 689999999975432 244567889999999999999887 33456799999998776654321
Q ss_pred CCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC
Q 020608 139 PADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC 215 (323)
Q Consensus 139 ~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~ 215 (323)
..|+.||.+.+.+.+.++.+. |+++++++||.+ .+...... ...
T Consensus 162 ---------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--~~~--------- 208 (319)
T 1gz6_A 162 ---------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--PED--------- 208 (319)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--CHH---------
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--Chh---------
Confidence 349999999999999988774 899999999987 44321100 000
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCC-CCcc-EEEEcC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPS-ACGR-HLCVEA 254 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~-~~~~~~ 254 (323)
...+++++|+|.+++.++..+. ..|+ |++.+.
T Consensus 209 -------~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 209 -------LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp -------HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred -------hhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 0113578999999999987543 2444 555544
No 295
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.89 E-value=2.9e-22 Score=184.10 Aligned_cols=227 Identities=18% Similarity=0.123 Sum_probs=166.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcH-HHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcC--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDE-RETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTG--CT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d 79 (323)
.+++||||||+|+||.+++++|+++|+ +|++++|+..+. ...+....+...+.++.++.+|++|.+++++++++ +|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 468999999999999999999999999 688889875321 12223333444455789999999999999999875 99
Q ss_pred EEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhC-CcCEEEEecccccccCCCCCCCCccccCCCCCChhh
Q 020608 80 GVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKAL-GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEY 154 (323)
Q Consensus 80 ~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~ 154 (323)
+|||+||..... .+.+.+...+++|+.++.++.+++... +.++||++||.+++++....
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~---------------- 401 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ---------------- 401 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB----------------
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC----------------
Confidence 999999976432 133456778899999999999998776 67899999999777765421
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHH
Q 020608 155 CRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVAL 234 (323)
Q Consensus 155 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~ 234 (323)
..|+.+|...+.+++.+. ..|+++++++||.+.+.+.... ... ..+.. ..+.+++++|+++
T Consensus 402 -----~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~--~~~---~~~~~--------~g~~~l~~e~~a~ 462 (511)
T 2z5l_A 402 -----GAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG--AGE---ESLSR--------RGLRAMDPDAAVD 462 (511)
T ss_dssp -----HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC--HHH---HHHHH--------HTBCCBCHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc--ccH---HHHHh--------cCCCCCCHHHHHH
Confidence 349999999999988764 5699999999998843332211 111 11111 1134688999999
Q ss_pred HHHHhhcCCCCCccEEEEcCccCHHHHHHHHHHHC
Q 020608 235 AHILVYENPSACGRHLCVEAISHYGDFVAKVAELY 269 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~ 269 (323)
++..++..+.. ...+. .+.|..+...+....
T Consensus 463 ~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~ 493 (511)
T 2z5l_A 463 ALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR 493 (511)
T ss_dssp HHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence 99999986533 22232 345777776665544
No 296
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.88 E-value=1.9e-21 Score=162.98 Aligned_cols=212 Identities=13% Similarity=0.049 Sum_probs=142.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEE-e--cCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHH-HHh---cC
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-V--KNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIA-AAV---TG 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~---~~ 77 (323)
+|++|||||+|+||++++++|+++|++|+++ . |+.+... +....+ .+.... |..+.+.+. ++. .+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~--~~~~~~----~~~~~~--~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ--RFESEN----PGTIAL--AEQKPERLVDATLQHGEA 72 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH--HHHHHS----TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHH--HHHHHh----CCCccc--CHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999998 5 8642221 222222 122222 444443332 222 36
Q ss_pred CCEEEEcccCCcc---CC----CCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccC
Q 020608 78 CTGVFHLASPCIV---DK----VEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDE 146 (323)
Q Consensus 78 ~d~Vih~a~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e 146 (323)
+|+|||+||.... .. +.+.+...+++|+.++.++++++. +.+.++||++||..++.+.+..
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------- 144 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN-------- 144 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC--------
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc--------
Confidence 8999999997543 11 345677899999999999999874 4556799999999666544321
Q ss_pred CCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCC---CCCCchhHHHHHHHHc-CCCCCc
Q 020608 147 DCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVI---PPTLNASMLMLLRLLQ-GCTDTY 219 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~---~~~~~~~~~~~~~~~~-g~~~~~ 219 (323)
..|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.. ... . .......... ..+
T Consensus 145 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~~~~p--- 206 (244)
T 1zmo_A 145 -------------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW-E-NNPELRERVDRDVP--- 206 (244)
T ss_dssp -------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH-H-HCHHHHHHHHHHCT---
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc-c-chHHHHHHHhcCCC---
Confidence 34999999999999988776 389999999999988753 110 0 0011111111 111
Q ss_pred cCcCCCcccHHHHHHHHHHhhcCCCC--CccEE-EEc
Q 020608 220 ENFFMGSVHFKDVALAHILVYENPSA--CGRHL-CVE 253 (323)
Q Consensus 220 ~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~-~~~ 253 (323)
. ..+..++|+|++++.++..... .|++. +.+
T Consensus 207 -~--~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdg 240 (244)
T 1zmo_A 207 -L--GRLGRPDEMGALITFLASRRAAPIVGQFFAFTG 240 (244)
T ss_dssp -T--CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEEST
T ss_pred -C--CCCcCHHHHHHHHHHHcCccccCccCCEEEeCC
Confidence 1 1267899999999999976432 45544 443
No 297
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.88 E-value=1.1e-21 Score=169.24 Aligned_cols=227 Identities=10% Similarity=0.021 Sum_probs=147.6
Q ss_pred CCCCCceEEEeccc--cHHHHHHHHHHHHCCCEEEEEecCCCcH--------HHHHHHhhccCCC--CCeEEEEcc----
Q 020608 1 MSKEAEVVCVTGGS--GCIGSWLVSLLLERRYTVHATVKNLSDE--------RETAHLKALEGAD--TRLRLFQID---- 64 (323)
Q Consensus 1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~--~~~~~~~~D---- 64 (323)
|++++|++|||||+ |+||++++++|+++|++|++++|++... ...+....+.... .....+.+|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence 45678999999999 9999999999999999999998642100 0000111111100 012333333
Q ss_pred ----CC----C--------HhHHHHHh-------cCCCEEEEcccCCc------cCCCCCchhhhhhHHHHHHHHHHHHH
Q 020608 65 ----LL----D--------YDAIAAAV-------TGCTGVFHLASPCI------VDKVEDPQNQLLNPAVKGTVNVLTAA 115 (323)
Q Consensus 65 ----l~----~--------~~~~~~~~-------~~~d~Vih~a~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~ 115 (323)
++ | .+++++++ .++|+||||||... ...+.+.+...+++|+.++.++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 32 1 33444433 36899999998532 11244567889999999999999998
Q ss_pred hhC--CcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh----CCccEEEEcC
Q 020608 116 KAL--GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE----KGLDVVVVNP 189 (323)
Q Consensus 116 ~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~Rp 189 (323)
... ..+++|++||.++..+.+.. ...|+.+|.+.+.+.+.++.+ +|+++++++|
T Consensus 164 ~~~m~~~g~iv~isS~~~~~~~~~~--------------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~P 223 (297)
T 1d7o_A 164 LPIMNPGGASISLTYIASERIIPGY--------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA 223 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCTTC--------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHhccCceEEEEeccccccCCCCc--------------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEec
Confidence 654 12699999998666543321 024999999999999888765 5899999999
Q ss_pred CCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCcc-EEEEcC
Q 020608 190 GTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGR-HLCVEA 254 (323)
Q Consensus 190 ~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 254 (323)
|.+.+|...... .............+. ..+.+++|+|++++.++.... ..|+ +++.+.
T Consensus 224 G~v~T~~~~~~~-~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 224 GPLGSRAAKAIG-FIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp CCCBCCCSSCCS-HHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cccccchhhhcc-ccHHHHHHhhccCCC------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 999999754321 111222222222111 125689999999999987432 2455 455443
No 298
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.86 E-value=2.1e-21 Score=177.08 Aligned_cols=207 Identities=21% Similarity=0.139 Sum_probs=155.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHH-HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc------
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDER-ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT------ 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (323)
++++|||||+|+||.+++++|+++|+ +|+++.|+..+.. ..+....+...+.++.++.+|++|.++++++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 48999999999999999999999998 7888888643222 223333344445689999999999999999886
Q ss_pred CCCEEEEcccCC-ccC----CCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCC
Q 020608 77 GCTGVFHLASPC-IVD----KVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTD 151 (323)
Q Consensus 77 ~~d~Vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~ 151 (323)
.+|+|||+||.. ... .+.+.+...+++|+.++.++.+++.....++||++||.+++.+....
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~------------- 385 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ------------- 385 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC-------------
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc-------------
Confidence 369999999976 221 13445678999999999999999988888899999999888766432
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHH
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKD 231 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D 231 (323)
..|+.+|...+.+++.+. ..|+++++|.||.+.+++...... ....+.+. ....+.+++
T Consensus 386 --------~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~~--------g~~~l~pe~ 444 (496)
T 3mje_A 386 --------PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE----VHDRLVRQ--------GVLAMEPEH 444 (496)
T ss_dssp --------HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC----------CHHHHHT--------TEEEECHHH
T ss_pred --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH----HHHHHHhc--------CCCCCCHHH
Confidence 349999999999988765 579999999999998776432111 11111111 122457899
Q ss_pred HHHHHHHhhcCCCC
Q 020608 232 VALAHILVYENPSA 245 (323)
Q Consensus 232 ~a~~~~~~~~~~~~ 245 (323)
.+.++..++.....
T Consensus 445 ~~~~l~~~l~~~~~ 458 (496)
T 3mje_A 445 ALGALDQMLENDDT 458 (496)
T ss_dssp HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCc
Confidence 99999999886543
No 299
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.86 E-value=4.4e-22 Score=173.73 Aligned_cols=178 Identities=16% Similarity=0.113 Sum_probs=127.8
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC-------EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY-------TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAA 73 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 73 (323)
|. +.|||+||||+||||++++..|+++|+ +|+++++.+...........+.+. .+.++ +|+++.+++.+
T Consensus 1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~ 76 (327)
T 1y7t_A 1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKV 76 (327)
T ss_dssp CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHH
T ss_pred CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHH
Confidence 44 346899999999999999999999986 899987753111111111122211 11223 67777667788
Q ss_pred HhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cC-EEEEecccccccCCCCCCCCcccc-CCC-C
Q 020608 74 AVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VK-RVVVTSSISSITPSPKWPADKVKD-EDC-W 149 (323)
Q Consensus 74 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~~-e~~-~ 149 (323)
+++++|+|||+||....+ ..+..+.++.|+.++.++++++++.+ .+ +++++|+.... ..++. |.. .
T Consensus 77 a~~~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~--------~~~~~~~~~~~ 146 (327)
T 1y7t_A 77 AFKDADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT--------NALIAYKNAPG 146 (327)
T ss_dssp HTTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH--------HHHHHHHTCTT
T ss_pred HhCCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh--------hHHHHHHHcCC
Confidence 899999999999976442 34567799999999999999999875 55 88888875211 11111 111 1
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIP 198 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~ 198 (323)
..|. +.|+.+|+..|++...+++.+|++.+++||++||||+..
T Consensus 147 ~~p~------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 147 LNPR------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp SCGG------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred CChh------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 2222 569999999999999999888999999999999999754
No 300
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.85 E-value=8.5e-21 Score=165.32 Aligned_cols=229 Identities=13% Similarity=0.046 Sum_probs=124.7
Q ss_pred CCCCCceEEEecc--ccHHHHHHHHHHHHCCCEEEEEecCC--------CcHHHHH------------HHhhccCCCC--
Q 020608 1 MSKEAEVVCVTGG--SGCIGSWLVSLLLERRYTVHATVKNL--------SDERETA------------HLKALEGADT-- 56 (323)
Q Consensus 1 m~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~------------~~~~~~~~~~-- 56 (323)
|++++|++||||| +|+||++++++|+++|++|++++|++ .+....+ ..+.+...+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 3456789999999 89999999999999999999998642 0000000 0111111000
Q ss_pred -CeEEEEccC------------CC--------HhHHHHHhc-------CCCEEEEcccCCc------cCCCCCchhhhhh
Q 020608 57 -RLRLFQIDL------------LD--------YDAIAAAVT-------GCTGVFHLASPCI------VDKVEDPQNQLLN 102 (323)
Q Consensus 57 -~~~~~~~Dl------------~~--------~~~~~~~~~-------~~d~Vih~a~~~~------~~~~~~~~~~~~~ 102 (323)
...++.+|+ +| .++++++++ ++|+||||||... ...+.+.+...++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS 164 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence 124444442 22 224444433 7899999998642 1124456788999
Q ss_pred HHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh-
Q 020608 103 PAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE- 179 (323)
Q Consensus 103 ~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~- 179 (323)
+|+.++.++++++... ..++||++||.++..+.+.. ...|+.+|.+.+.+.+.++.+
T Consensus 165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--------------------~~~Y~asKaal~~l~~~la~el 224 (319)
T 2ptg_A 165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY--------------------GGGMSSAKAALESDCRTLAFEA 224 (319)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEEECC--------------------------------------THHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc--------------------chhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999998654 12699999998665443211 024999999999988887765
Q ss_pred ---CCccEEEEcCCCccCCCCCCCCch-hHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccEEE
Q 020608 180 ---KGLDVVVVNPGTVMGPVIPPTLNA-SMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRHLC 251 (323)
Q Consensus 180 ---~~~~~~~~Rp~~v~G~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 251 (323)
+|+++++|+||.|.++........ ................+. ..+..++|+|.+++.++.... ..|+.+.
T Consensus 225 ~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~r~~~peevA~~v~~L~s~~~~~itG~~i~ 300 (319)
T 2ptg_A 225 GRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPL--QKELESDDVGRAALFLLSPLARAVTGATLY 300 (319)
T ss_dssp HHHHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred ccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCC--CCCCCHHHHHHHHHHHhCcccCCccCCEEE
Confidence 489999999999998753211000 000000000000000111 125689999999999987532 3455443
No 301
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.85 E-value=1.1e-20 Score=164.36 Aligned_cols=225 Identities=13% Similarity=0.054 Sum_probs=143.1
Q ss_pred CCCCceEEEecc--ccHHHHHHHHHHHHCCCEEEEEecCCC--------cHHHHHHHhhccCCC--CCeEEEEccC----
Q 020608 2 SKEAEVVCVTGG--SGCIGSWLVSLLLERRYTVHATVKNLS--------DERETAHLKALEGAD--TRLRLFQIDL---- 65 (323)
Q Consensus 2 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~--~~~~~~~~Dl---- 65 (323)
++++|++||||| +|+||++++++|+++|++|++++|++. +....+....+.... ....++.+|+
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence 456789999999 899999999999999999999987521 000111122221100 0123444443
Q ss_pred --------CC--------HhHHHHHhc-------CCCEEEEcccCCc------cCCCCCchhhhhhHHHHHHHHHHHHHh
Q 020608 66 --------LD--------YDAIAAAVT-------GCTGVFHLASPCI------VDKVEDPQNQLLNPAVKGTVNVLTAAK 116 (323)
Q Consensus 66 --------~~--------~~~~~~~~~-------~~d~Vih~a~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~ 116 (323)
+| .++++++++ ++|+||||||... ...+.+.+...+++|+.++.++++++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 22 334444433 6899999999642 112445678899999999999999986
Q ss_pred hC--CcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh----CCccEEEEcCC
Q 020608 117 AL--GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE----KGLDVVVVNPG 190 (323)
Q Consensus 117 ~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~Rp~ 190 (323)
.. ..++||++||.++..+.+... ..|+.||.+.+.+.+.++.+ +|+++++++||
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG 225 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVVPGYG--------------------GGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAG 225 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCCTTCC--------------------TTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HHHhcCCEEEEEecccccccCCCcc--------------------HHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecc
Confidence 54 126999999986655433210 24999999999998887765 58999999999
Q ss_pred CccCCCCCCC-----CchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCC--CCccEEEE
Q 020608 191 TVMGPVIPPT-----LNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPS--ACGRHLCV 252 (323)
Q Consensus 191 ~v~G~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~ 252 (323)
.|.++..... ............... +. ..+..++|+|.+++.++.... ..|+++..
T Consensus 226 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----p~--~r~~~pedvA~~v~~L~s~~~~~itG~~i~v 288 (315)
T 2o2s_A 226 PLKSRAASAIGKSGEKSFIDYAIDYSYNNA----PL--RRDLHSDDVGGAALFLLSPLARAVSGVTLYV 288 (315)
T ss_dssp CCCCHHHHHTTCSSSSCHHHHHHHHHHHHS----SS--CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred cccchhhhhccccccchhHHHHHHHHhccC----CC--CCCCCHHHHHHHHHHHhCchhccCcCCEEEE
Confidence 9987631100 000011111111111 11 125689999999999987432 35665543
No 302
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.85 E-value=9.2e-21 Score=174.81 Aligned_cols=227 Identities=15% Similarity=0.072 Sum_probs=159.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCE-EEEE-ecCCCc-----------HHHHHHHhhccCCCCCeEEEEccCCCHhH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYT-VHAT-VKNLSD-----------ERETAHLKALEGADTRLRLFQIDLLDYDA 70 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (323)
+++++|||||+|+||.+++++|+++|++ |+++ +|+..+ ....+....+...+.++.++.+|++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 4689999999999999999999999997 5555 776432 11122233333335578999999999999
Q ss_pred HHHHhcC------CCEEEEcccCCccCC----CCCchhhhhhHHHHHHHHHHHHHhhCC-----cCEEEEecccccccCC
Q 020608 71 IAAAVTG------CTGVFHLASPCIVDK----VEDPQNQLLNPAVKGTVNVLTAAKALG-----VKRVVVTSSISSITPS 135 (323)
Q Consensus 71 ~~~~~~~------~d~Vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~SS~~~~~~~ 135 (323)
++++++. +|+|||+||...... +.+.+...+++|+.|+.++.+++.... .++||++||.+++.+.
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 9998874 699999999764322 345577899999999999999987665 6899999999887765
Q ss_pred CCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCC
Q 020608 136 PKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGC 215 (323)
Q Consensus 136 ~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~ 215 (323)
... ..|+.+|...+.++..+. ..|+++++|.||.+-++.... . . ....+.+.
T Consensus 410 ~g~---------------------~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~~-~-~---~~~~~~~~- 461 (525)
T 3qp9_A 410 AGQ---------------------GAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVTE-G-A---TGERLRRL- 461 (525)
T ss_dssp TTC---------------------HHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGGS-S-H---HHHHHHHT-
T ss_pred CCC---------------------HHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccccc-h-h---hHHHHHhc-
Confidence 432 349999999998876553 459999999999994433211 1 1 11111111
Q ss_pred CCCccCcCCCcccHHHHHHHHHHhhcCCCCCccEEEEcCccCHHHHHHHHHHHC
Q 020608 216 TDTYENFFMGSVHFKDVALAHILVYENPSACGRHLCVEAISHYGDFVAKVAELY 269 (323)
Q Consensus 216 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~ 269 (323)
....+.++++++++..++..+.. .. .-..+.|..+...+....
T Consensus 462 -------g~~~l~pee~a~~l~~~l~~~~~---~v-~v~~~dw~~~~~~~~~~~ 504 (525)
T 3qp9_A 462 -------GLRPLAPATALTALDTALGHGDT---AV-TIADVDWSSFAPGFTTAR 504 (525)
T ss_dssp -------TBCCBCHHHHHHHHHHHHHHTCS---EE-EECCBCHHHHHHHHHSSS
T ss_pred -------CCCCCCHHHHHHHHHHHHhCCCC---eE-EEEeCCHHHHHhhccccC
Confidence 12356799999999999986533 22 222345666666655443
No 303
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.83 E-value=4.6e-20 Score=173.55 Aligned_cols=198 Identities=18% Similarity=0.104 Sum_probs=138.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEec---------CCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVK---------NLSDERETAHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
|++++|++|||||+|+||++++++|+++|++|++++| +..... ...+.+...... ..+|++|.+++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~--~~~~~i~~~~~~---~~~D~~d~~~~ 89 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAAD--IVVDEIRKAGGE---AVADYNSVIDG 89 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHH--HHHHHHHHTTCC---EEECCCCGGGH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHH--HHHHHHHHhCCe---EEEEeCCHHHH
Confidence 3567899999999999999999999999999999887 222211 222222222222 34799998888
Q ss_pred HHHhc-------CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHH----hhCCcCEEEEecccccccCCC
Q 020608 72 AAAVT-------GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAA----KALGVKRVVVTSSISSITPSP 136 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~ 136 (323)
+++++ ++|+||||||..... .+.+.+...+++|+.|+.++++++ ++.+.++||++||.++.++..
T Consensus 90 ~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~ 169 (613)
T 3oml_A 90 AKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF 169 (613)
T ss_dssp HHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence 87766 579999999976432 244567889999999999999998 455567999999998777654
Q ss_pred CCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC---CccEEEEcCCCccCCCCCCCCchhHHHHHHHHc
Q 020608 137 KWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK---GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQ 213 (323)
Q Consensus 137 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~ 213 (323)
.. ..|+.||.+.+.+++.++.+. |++++++.||.+ .+.......
T Consensus 170 ~~---------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~----------- 216 (613)
T 3oml_A 170 GQ---------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP----------- 216 (613)
T ss_dssp TC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-----------
T ss_pred CC---------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-----------
Confidence 21 349999999999999988774 899999999864 222111110
Q ss_pred CCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 214 GCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 214 g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
......+.++|+|.+++.++...
T Consensus 217 -------~~~~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 217 -------DILFNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp -------HHHHTTCCGGGTHHHHHHTTSTT
T ss_pred -------hhhhhcCCHHHHHHHHHHhcCCC
Confidence 00112347899999999998764
No 304
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.82 E-value=8.1e-20 Score=159.68 Aligned_cols=172 Identities=9% Similarity=0.025 Sum_probs=123.9
Q ss_pred CceEEEecccc--HHHHHHHHHHHHCCCEEEEEecCCCc------HHHHHHHhh-cc---CCCCCeEEEEccCCCH--h-
Q 020608 5 AEVVCVTGGSG--CIGSWLVSLLLERRYTVHATVKNLSD------ERETAHLKA-LE---GADTRLRLFQIDLLDY--D- 69 (323)
Q Consensus 5 ~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~-~~---~~~~~~~~~~~Dl~~~--~- 69 (323)
+|++|||||++ +||.+++++|+++|++|++..|++.. .+..+.... .. .....+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 68999999875 99999999999999999987765310 000000011 11 1123467889999877 6
Q ss_pred -----------------HHHHHhc-------CCCEEEEcccCCc--c----CCCCCchhhhhhHHHHHHHHHHHHHhhCC
Q 020608 70 -----------------AIAAAVT-------GCTGVFHLASPCI--V----DKVEDPQNQLLNPAVKGTVNVLTAAKALG 119 (323)
Q Consensus 70 -----------------~~~~~~~-------~~d~Vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (323)
++.++++ ++|++|||||... . ..+.+.+...+++|+.++..+++++...-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5555543 6899999999632 1 12455678899999999999999985431
Q ss_pred --cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh----CCccEEEEcCCCcc
Q 020608 120 --VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE----KGLDVVVVNPGTVM 193 (323)
Q Consensus 120 --~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~Rp~~v~ 193 (323)
-++||++||.++..+.+... ..|+.||.+.+.+.+.++.+ +|++++++.||.|.
T Consensus 162 ~~~g~Iv~isS~~~~~~~~~~~--------------------~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~ 221 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKVVPGYG--------------------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCT--------------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hhCCeEEEEeCccccCCCCcch--------------------HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence 15999999997665543211 14999999999888887665 48999999999998
Q ss_pred CCC
Q 020608 194 GPV 196 (323)
Q Consensus 194 G~~ 196 (323)
.+.
T Consensus 222 T~~ 224 (329)
T 3lt0_A 222 SRA 224 (329)
T ss_dssp CHH
T ss_pred chh
Confidence 864
No 305
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.78 E-value=4.4e-18 Score=159.50 Aligned_cols=203 Identities=18% Similarity=0.083 Sum_probs=141.5
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccC-CCHhHH-HH---Hhc
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDL-LDYDAI-AA---AVT 76 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~-~~---~~~ 76 (323)
++++|+++||||+++||++++++|+++|++|++.+|... ....+.+.. .+.++..+.+|+ ++.+.+ ++ .+.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~-~~~~~~i~~---~g~~~~~~~~Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA-TKTVDEIKA---AGGEAWPDQHDVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH-HHHHHHHHh---cCCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence 466789999999999999999999999999999876432 222222222 234567778888 554432 22 234
Q ss_pred CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCCCCccccCCC
Q 020608 77 GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWPADKVKDEDC 148 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~ 148 (323)
++|++|||||..... .+.+.+...+++|+.|+.++.+++. +.+.++||++||.++..+....
T Consensus 395 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~---------- 464 (604)
T 2et6_A 395 TIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ---------- 464 (604)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC----------
Confidence 799999999975322 2445788999999999999998873 3445699999999777654321
Q ss_pred CCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCC
Q 020608 149 WTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMG 225 (323)
Q Consensus 149 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 225 (323)
..|+.||.....+.+.++.+ +|++++.|.||. ..+.... .... ....
T Consensus 465 -----------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~-------~~~~-----------~~~~ 514 (604)
T 2et6_A 465 -----------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS-------IMRE-----------QDKN 514 (604)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CC
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc-------cCch-----------hhcc
Confidence 34999999999998888876 489999999983 4332110 0000 0012
Q ss_pred cccHHHHHHHHHHhhcCCC-CCcc
Q 020608 226 SVHFKDVALAHILVYENPS-ACGR 248 (323)
Q Consensus 226 ~i~v~D~a~~~~~~~~~~~-~~~~ 248 (323)
...++|+|.+++.++.... ..|+
T Consensus 515 ~~~pe~vA~~v~~L~s~~~~itG~ 538 (604)
T 2et6_A 515 LYHADQVAPLLVYLGTDDVPVTGE 538 (604)
T ss_dssp SSCGGGTHHHHHHTTSTTCCCCSC
T ss_pred CCCHHHHHHHHHHHhCCccCCCCc
Confidence 3478999999999886533 3444
No 306
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.77 E-value=1.2e-17 Score=169.05 Aligned_cols=208 Identities=12% Similarity=0.076 Sum_probs=144.8
Q ss_pred CCCCCceEEEeccccH-HHHHHHHHHHHCCCEEEEEe-cCCCcHHHH-HHH-hhccCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 1 MSKEAEVVCVTGGSGC-IGSWLVSLLLERRYTVHATV-KNLSDERET-AHL-KALEGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
|++++|++|||||+|+ ||.++++.|+++|++|+++. |+....... +.+ ..+...+.++.++.+|++|.++++++++
T Consensus 671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~ 750 (1887)
T 2uv8_A 671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 750 (1887)
T ss_dssp BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence 4567899999999999 99999999999999999984 543222111 111 2222224578899999999999887653
Q ss_pred -------------CCCEEEEcccCCccC-C----C--CCchhhhhhHHHHHHHHHHHHHhhC------CcCEEEEecccc
Q 020608 77 -------------GCTGVFHLASPCIVD-K----V--EDPQNQLLNPAVKGTVNVLTAAKAL------GVKRVVVTSSIS 130 (323)
Q Consensus 77 -------------~~d~Vih~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~ 130 (323)
++|+||||||..... . . .+.+...+++|+.++..++++++.. +.++||++||..
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a 830 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 830 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence 489999999976432 1 2 3457889999999999999987322 225999999986
Q ss_pred cccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHH-HHHHHHhCC--ccEEEEcCCCccC-CCCCCCCchhHH
Q 020608 131 SITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKA-AWEFAKEKG--LDVVVVNPGTVMG-PVIPPTLNASML 206 (323)
Q Consensus 131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~~~Rp~~v~G-~~~~~~~~~~~~ 206 (323)
+..+. . ..|+.||...+.+ .+.++.+.+ ++++++.||.+.| +..... ....
T Consensus 831 g~~gg--~---------------------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~- 885 (1887)
T 2uv8_A 831 GTFGG--D---------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIA- 885 (1887)
T ss_dssp TCSSC--B---------------------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTH-
T ss_pred hccCC--C---------------------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHH-
Confidence 55441 1 3499999999998 666665543 9999999999984 432211 1111
Q ss_pred HHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 207 MLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 207 ~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
...... + ..+..++|+|.+++.++...
T Consensus 886 ---~~~~~~----p---lr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 886 ---EGIEKM----G---VRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp ---HHHHTT----S---CCCEEHHHHHHHHHGGGSHH
T ss_pred ---HHHHhc----C---CCCCCHHHHHHHHHHHhCCC
Confidence 111111 1 12447999999999998754
No 307
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.76 E-value=5.4e-17 Score=164.14 Aligned_cols=208 Identities=12% Similarity=0.062 Sum_probs=145.4
Q ss_pred CCCCCceEEEeccccH-HHHHHHHHHHHCCCEEEEEecCCCcH-HH-HHHH-hhccCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 1 MSKEAEVVCVTGGSGC-IGSWLVSLLLERRYTVHATVKNLSDE-RE-TAHL-KALEGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
|++++|++|||||+|+ ||.++++.|+++|++|++++++.... .. .+.+ ..+...+.++.++.+|++|.++++++++
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 4577899999999999 99999999999999999986443221 11 1111 2233234578899999999999887763
Q ss_pred -----------CCCEEEEcccCCccC-C----C--CCchhhhhhHHHHHHHHHHHHHh--h----CCcCEEEEecccccc
Q 020608 77 -----------GCTGVFHLASPCIVD-K----V--EDPQNQLLNPAVKGTVNVLTAAK--A----LGVKRVVVTSSISSI 132 (323)
Q Consensus 77 -----------~~d~Vih~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~--~----~~~~~~v~~SS~~~~ 132 (323)
.+|+||||||..... . . .+.+...+++|+.++.+++++++ . .+.++||++||.++.
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence 489999999976432 1 1 24578899999999999887732 1 223699999998665
Q ss_pred cCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh-C--CccEEEEcCCCcc-CCCCCCCCchhHHHH
Q 020608 133 TPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE-K--GLDVVVVNPGTVM-GPVIPPTLNASMLML 208 (323)
Q Consensus 133 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~Rp~~v~-G~~~~~~~~~~~~~~ 208 (323)
.+.. ..|+.+|...+.++..+..+ . +++++.+.||.+. ++.... ....
T Consensus 808 ~gg~-----------------------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~ 859 (1878)
T 2uv9_A 808 FGND-----------------------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLV 859 (1878)
T ss_dssp SSCC-----------------------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHT
T ss_pred cCCc-----------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhh
Confidence 4421 34999999999987765443 2 3999999999998 554321 0111
Q ss_pred HHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 209 LRLLQGCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 209 ~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
....... + ..+..++|+|.+++.++...
T Consensus 860 ~~~~~~~----p---lr~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 860 AEGVEKL----G---VRTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp HHHHHTT----T---CCCBCHHHHHHHHHHHHSHH
T ss_pred HHHHHhc----C---CCCCCHHHHHHHHHHHhCCc
Confidence 1112211 1 12348999999999988654
No 308
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.75 E-value=2.2e-17 Score=144.47 Aligned_cols=211 Identities=9% Similarity=-0.052 Sum_probs=141.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHH-CCCEEEEEecCCCcHHH---------HHH-HhhccCCCCCeEEEEccCCCHhHHH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLE-RRYTVHATVKNLSDERE---------TAH-LKALEGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~---------~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
.+|++|||||++.||.++++.|++ .|++|++++|+...... ... .+.+...+..+..+.+|++|.++++
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 468999999999999999999999 99999999887644221 011 1112222456888999999999888
Q ss_pred HHhc-------CCCEEEEcccCCc--------------------------------------cCCCCCchhhhhhHHHHH
Q 020608 73 AAVT-------GCTGVFHLASPCI--------------------------------------VDKVEDPQNQLLNPAVKG 107 (323)
Q Consensus 73 ~~~~-------~~d~Vih~a~~~~--------------------------------------~~~~~~~~~~~~~~n~~~ 107 (323)
++++ ++|++||+||... .+.+.+.+..++++|..+
T Consensus 126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~ 205 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE 205 (405)
T ss_dssp HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence 7665 6799999998631 112345677888888877
Q ss_pred HH-HHHHHHhhC----CcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---
Q 020608 108 TV-NVLTAAKAL----GVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE--- 179 (323)
Q Consensus 108 ~~-~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--- 179 (323)
.. .+++++... +-.++|++||.++..+.+.. ....|+.+|...+.+.+.++.+
T Consensus 206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~-------------------~~~aY~AaKaal~~ltrsLA~Ela~ 266 (405)
T 3zu3_A 206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY-------------------WNGSIGAAKKDLDQKVLAIRESLAA 266 (405)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT-------------------TTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc-------------------cchHHHHHHHHHHHHHHHHHHHhCc
Confidence 75 455554321 12589999998665443321 0134999999999998888766
Q ss_pred C-CccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcC
Q 020608 180 K-GLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 180 ~-~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
+ |++++++.||.+..+....... .......+.+ + . +. +-..+|+|.++..|+..
T Consensus 267 ~~GIRVNaVaPG~i~T~~s~~ip~-~p~y~~~l~~--~-m-kr----~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 267 HGGGDARVSVLKAVVSQASSAIPM-MPLYLSLLFK--V-M-KE----KGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp TTSCEEEEEECCCCCCHHHHTSTT-HHHHHHHHHH--H-H-HH----HTCCCCHHHHHHHHHHH
T ss_pred ccCeEEEEEEeCCCcCchhhcCCC-CcHHHHHHHH--H-H-hc----CCCcHHHHHHHHHHHhc
Confidence 4 8999999999998874322111 1111111111 0 0 00 11348999999988864
No 309
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.6e-18 Score=166.05 Aligned_cols=208 Identities=12% Similarity=0.073 Sum_probs=142.8
Q ss_pred CCCCCceEEEeccccH-HHHHHHHHHHHCCCEEEEEe-cCCCcHHH-HHHH-hhccCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 1 MSKEAEVVCVTGGSGC-IGSWLVSLLLERRYTVHATV-KNLSDERE-TAHL-KALEGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
|++++|++|||||+|+ ||++++++|+++|++|+++. |+...... .+.+ ..+...+.++.++.+|++|.++++++++
T Consensus 472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe 551 (1688)
T 2pff_A 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 551 (1688)
T ss_dssp CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence 4567889999999998 99999999999999999884 55433221 1111 1112224468899999999998887653
Q ss_pred -------------CCCEEEEcccCCccC-C----C--CCchhhhhhHHHHHHHHHHHHHhh--C----CcCEEEEecccc
Q 020608 77 -------------GCTGVFHLASPCIVD-K----V--EDPQNQLLNPAVKGTVNVLTAAKA--L----GVKRVVVTSSIS 130 (323)
Q Consensus 77 -------------~~d~Vih~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~--~----~~~~~v~~SS~~ 130 (323)
++|+||||||..... . . .+.+...+++|+.++.+++++++. . +.++||++||.+
T Consensus 552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA 631 (1688)
T 2pff_A 552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 631 (1688)
T ss_dssp HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence 489999999975432 1 1 345688999999999999998732 1 235899999986
Q ss_pred cccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHH-HHHHHHhCC--ccEEEEcCCCccC-CCCCCCCchhHH
Q 020608 131 SITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKA-AWEFAKEKG--LDVVVVNPGTVMG-PVIPPTLNASML 206 (323)
Q Consensus 131 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~~~Rp~~v~G-~~~~~~~~~~~~ 206 (323)
+..+. . ..|+.||.+.+.+ .+.++++.+ ++++.+.||.+.| +......
T Consensus 632 G~~Gg--~---------------------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e----- 683 (1688)
T 2pff_A 632 GTFGG--D---------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN----- 683 (1688)
T ss_dssp TTSSC--B---------------------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTT-----
T ss_pred hccCC--c---------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCch-----
Confidence 55431 1 3499999999998 444444332 8899999999985 4322100
Q ss_pred HHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 207 MLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 207 ~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
........ .+ ..+..++|+|.+++.++...
T Consensus 684 ~~~~~l~~----ip---lR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 684 IIAEGIEK----MG---VRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp TCSTTTSS----SS---CCCCCCCTTHHHHHHHTSTT
T ss_pred HHHHHHHh----CC---CCCCCHHHHHHHHHHHhCCC
Confidence 00000000 11 12447899999999998765
No 310
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=99.74 E-value=1.9e-17 Score=146.18 Aligned_cols=211 Identities=12% Similarity=-0.032 Sum_probs=139.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHH-CCCEEEEEecCCCcHHH---------HH-HHhhccCCCCCeEEEEccCCCHhHHH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLE-RRYTVHATVKNLSDERE---------TA-HLKALEGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~---------~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
.+|++|||||+++||.++++.|++ .|++|++++|+...... .. ..+.+...+..+..+.+|++|.++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 468999999999999999999999 99999999987654221 00 11122222456888999999998877
Q ss_pred HHh--------cCCCEEEEcccCC-------------cc-------------------------CCCCCchhhhhhHHHH
Q 020608 73 AAV--------TGCTGVFHLASPC-------------IV-------------------------DKVEDPQNQLLNPAVK 106 (323)
Q Consensus 73 ~~~--------~~~d~Vih~a~~~-------------~~-------------------------~~~~~~~~~~~~~n~~ 106 (323)
+++ -++|++|||||.. .. +.+.+.+...+++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 654 3579999999862 10 1133455667777766
Q ss_pred HHH-HHHHHHhhCC----cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh--
Q 020608 107 GTV-NVLTAAKALG----VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE-- 179 (323)
Q Consensus 107 ~~~-~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-- 179 (323)
+.. .++.++.... ..++|++||.++..+.+. + ....|+.||...+.+.+.++.+
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~----------------~---~~~aY~ASKaAl~~lTrsLA~Ela 280 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI----------------Y---WHGALGKAKVDLDRTAQRLNARLA 280 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH----------------H---TSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC----------------c---cchHHHHHHHHHHHHHHHHHHHhC
Confidence 664 5566553321 258999999855433211 0 0134999999999999888877
Q ss_pred -CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcC
Q 020608 180 -KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYEN 242 (323)
Q Consensus 180 -~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 242 (323)
+|++++++.||.|..|....... .........+ + . +. +-..+|+|.++..++..
T Consensus 281 ~~GIRVNaVaPG~i~T~~~~~ip~-~~~~~~~~~~--~-m-~r----~G~pEdva~~v~~L~sd 335 (422)
T 3s8m_A 281 KHGGGANVAVLKSVVTQASAAIPV-MPLYISMVYK--I-M-KE----KGLHEGTIEQLDRLFRE 335 (422)
T ss_dssp TTTCEEEEEEECCCCCTTGGGSTH-HHHHHHHHHH--H-H-HH----TTCCCCHHHHHHHHHHH
T ss_pred ccCEEEEEEEcCCCcChhhhcCCC-ChHHHHHHHh--h-h-cC----CcChHHHHHHHHHHhcc
Confidence 48999999999999986432211 1111111100 0 0 00 11348999999988854
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.73 E-value=1.3e-17 Score=160.79 Aligned_cols=208 Identities=20% Similarity=0.176 Sum_probs=152.2
Q ss_pred CCceEEEeccccHHHHHHHHHHH-HCCC-EEEEEecCCCcHH-HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc----
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLL-ERRY-TVHATVKNLSDER-ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT---- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (323)
+++++|||||+|.||..+++.|+ ++|+ +|++++|+..+.+ ..+..+++...+.++.++.+|++|.++++++++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7898 5888899743222 223334444445678999999999999998876
Q ss_pred --CCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCC
Q 020608 77 --GCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWT 150 (323)
Q Consensus 77 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~ 150 (323)
.+|+||||||..... .+.+.+...+++|+.|+.++.+++... . +||++||.++..+....
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~-l-~iV~~SS~ag~~g~~g~------------ 674 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD-V-ALVLFSSVSGVLGSGGQ------------ 674 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT-S-EEEEEEETHHHHTCSSC------------
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC-C-EEEEEccHHhcCCCCCC------------
Confidence 369999999975332 245678899999999999999998433 3 99999999888776542
Q ss_pred ChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCCCCccCcCCCcccHH
Q 020608 151 DEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCTDTYENFFMGSVHFK 230 (323)
Q Consensus 151 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~ 230 (323)
..|+.+|...+.+....+ ..|+++++|.||.+-+++.... ........+.+. .+..+..+
T Consensus 675 ---------~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~~--------g~~~l~~~ 734 (795)
T 3slk_A 675 ---------GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST--LREAEQDRLARS--------GLLPISTE 734 (795)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHHT--------TBCCCCHH
T ss_pred ---------HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc--ccHHHHHHHHhc--------CCCCCCHH
Confidence 349999998888887765 5699999999999876642110 000111111111 12246788
Q ss_pred HHHHHHHHhhcCCCC
Q 020608 231 DVALAHILVYENPSA 245 (323)
Q Consensus 231 D~a~~~~~~~~~~~~ 245 (323)
+....+..++.....
T Consensus 735 e~~~~~~~~l~~~~~ 749 (795)
T 3slk_A 735 EGLSQFDAACGGAHT 749 (795)
T ss_dssp HHHHHHHHHHTSSCS
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999888876543
No 312
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.73 E-value=2.5e-17 Score=154.38 Aligned_cols=199 Identities=14% Similarity=0.041 Sum_probs=134.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC-------cHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS-------DERETAHLKALEGADTRLRLFQIDLLDYDAIAAA 74 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 74 (323)
++++|+++||||++.||++++++|+++|++|++.+|+.. .....+..+++...+.... +|++|.++.+++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~ 81 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKI 81 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHH
Confidence 467799999999999999999999999999999877541 0111122223322222232 455555433332
Q ss_pred -------hcCCCEEEEcccCCccC----CCCCchhhhhhHHHHHHHHHHHHHh----hCCcCEEEEecccccccCCCCCC
Q 020608 75 -------VTGCTGVFHLASPCIVD----KVEDPQNQLLNPAVKGTVNVLTAAK----ALGVKRVVVTSSISSITPSPKWP 139 (323)
Q Consensus 75 -------~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~ 139 (323)
+.++|++|||||..... .+.+.+...+++|+.|+..+++++. +.+.++||++||.++..+....
T Consensus 82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~- 160 (604)
T 2et6_A 82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ- 160 (604)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB-
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCc-
Confidence 34789999999975322 2445688999999999999998873 3344699999999777665421
Q ss_pred CCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh---CCccEEEEcCCCccCCCCCCCCchhHHHHHHHHcCCC
Q 020608 140 ADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE---KGLDVVVVNPGTVMGPVIPPTLNASMLMLLRLLQGCT 216 (323)
Q Consensus 140 ~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~ 216 (323)
..|+.||.....+.+.++.+ +|++++.|.|+ +..+. .. ...
T Consensus 161 --------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m-----------~~----~~~ 204 (604)
T 2et6_A 161 --------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM-----------TE----SIM 204 (604)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH-----------HH----TTS
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc-----------cc----ccC
Confidence 34999999999999988876 48999999996 32211 00 000
Q ss_pred CCccCcCCCcccHHHHHHHHHHhhcCC
Q 020608 217 DTYENFFMGSVHFKDVALAHILVYENP 243 (323)
Q Consensus 217 ~~~~~~~~~~i~v~D~a~~~~~~~~~~ 243 (323)
+........++|+|.+++.++...
T Consensus 205 ---~~~~~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 205 ---PPPMLEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp ---CHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred ---ChhhhccCCHHHHHHHHHHHhCCc
Confidence 000011347899999999998754
No 313
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=99.70 E-value=2.1e-16 Score=140.68 Aligned_cols=216 Identities=8% Similarity=-0.035 Sum_probs=140.8
Q ss_pred CCceEEEeccccHHHHH--HHHHHHHCCCEEEEEecCCCcHHH---------HHHHh-hccCCCCCeEEEEccCCCHhHH
Q 020608 4 EAEVVCVTGGSGCIGSW--LVSLLLERRYTVHATVKNLSDERE---------TAHLK-ALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
.+|++|||||++.||.+ +++.|+++|++|+++.|+...... .+.+. .....+..+.++.+|++|.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 57899999999999999 999999999999999987643210 11111 1122245788999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCc-------------c-------------------------CCCCCchhhhhhHHHH
Q 020608 72 AAAVT-------GCTGVFHLASPCI-------------V-------------------------DKVEDPQNQLLNPAVK 106 (323)
Q Consensus 72 ~~~~~-------~~d~Vih~a~~~~-------------~-------------------------~~~~~~~~~~~~~n~~ 106 (323)
+++++ ++|++|||||... . +.+.+.+...+++|..
T Consensus 139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~ 218 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG 218 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence 87665 5799999998730 0 1133345566666666
Q ss_pred HHH-HHHHHHhhCC----cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh--
Q 020608 107 GTV-NVLTAAKALG----VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE-- 179 (323)
Q Consensus 107 ~~~-~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-- 179 (323)
+.. .++.++.... ..++|++||.++..+.+.. ....|+.+|.+.+.+.+.++.+
T Consensus 219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~-------------------~~~aY~ASKaAL~~ltrsLA~ELa 279 (418)
T 4eue_A 219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY-------------------REGTIGIAKKDLEDKAKLINEKLN 279 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT-------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc-------------------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 554 4555543322 2589999998655443321 0134999999999888887765
Q ss_pred --CCccEEEEcCCCccCCCCCCCCchhH--HHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCCCccE
Q 020608 180 --KGLDVVVVNPGTVMGPVIPPTLNASM--LMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPSACGRH 249 (323)
Q Consensus 180 --~~~~~~~~Rp~~v~G~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 249 (323)
+|++++++.||.|..+.......... ..+.+..+.. -..+|+++++..++...-.+|.+
T Consensus 280 ~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~-----------G~~E~v~e~~~~L~sd~~~~g~~ 342 (418)
T 4eue_A 280 RVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEK-----------NIHENCIMQIERMFSEKIYSNEK 342 (418)
T ss_dssp HHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHT-----------TCCCCHHHHHHHHHHHTTSSSSC
T ss_pred CccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhc-----------CChHHHHHHHHHHhhccccCCCc
Confidence 57999999999998874322111111 1111111110 12489999999888754333443
No 314
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.54 E-value=3.9e-13 Score=142.88 Aligned_cols=229 Identities=16% Similarity=0.112 Sum_probs=145.7
Q ss_pred CCCceEEEeccccH-HHHHHHHHHHHCCCEEEEEecCCCcHH---HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--
Q 020608 3 KEAEVVCVTGGSGC-IGSWLVSLLLERRYTVHATVKNLSDER---ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-- 76 (323)
Q Consensus 3 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 76 (323)
+++|++|||||+++ ||.++++.|++.|++|++.+|+.+... ..+..+.+...+.++..+.+|++|.++++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999865411 112223333334567889999999998887643
Q ss_pred ---------CCCEEEEcccC----Ccc-----CCCCCchhhh----hhHHHHHHHHHHHHHhh----CCcC---EEE-Ee
Q 020608 77 ---------GCTGVFHLASP----CIV-----DKVEDPQNQL----LNPAVKGTVNVLTAAKA----LGVK---RVV-VT 126 (323)
Q Consensus 77 ---------~~d~Vih~a~~----~~~-----~~~~~~~~~~----~~~n~~~~~~l~~~~~~----~~~~---~~v-~~ 126 (323)
++|++|||||. ... .....++... +++|+.++..++.++.. .+.. .++ ..
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 47999999997 111 1122334434 88899999888887633 2211 222 22
Q ss_pred cccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHh--C--CccEEEEcCCCccCCCCCCCCc
Q 020608 127 SSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKE--K--GLDVVVVNPGTVMGPVIPPTLN 202 (323)
Q Consensus 127 SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~~~Rp~~v~G~~~~~~~~ 202 (323)
|+.....+ . ...|+.||.+.+.+.+.++.+ . ++.++.+.||.+-+........
T Consensus 2294 ss~~g~~g--~---------------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~ 2350 (3089)
T 3zen_D 2294 SPNRGMFG--G---------------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND 2350 (3089)
T ss_dssp CSSTTSCS--S---------------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT
T ss_pred CcccccCC--C---------------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch
Confidence 22211111 0 034999999999999999988 3 6889999999998543221111
Q ss_pred hhHHHHHHHHcCCCCCccCcCCCcccHHHHHHHHHHhhcCCCC---Ccc-EE--EEcC----ccCHHHHHHHH
Q 020608 203 ASMLMLLRLLQGCTDTYENFFMGSVHFKDVALAHILVYENPSA---CGR-HL--CVEA----ISHYGDFVAKV 265 (323)
Q Consensus 203 ~~~~~~~~~~~g~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~-~~--~~~~----~~~~~e~~~~i 265 (323)
... ...... + .....++|+|.+++.++..... .+. .. ++|. ...+.++...+
T Consensus 2351 ~~~----~~~~~~----~---~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~ 2412 (3089)
T 3zen_D 2351 AIV----SAVEEA----G---VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKA 2412 (3089)
T ss_dssp TTH----HHHGGG----S---CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHH
T ss_pred hHH----HHHHhc----C---CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHH
Confidence 111 111111 1 1123789999999999874321 222 22 2232 24677777654
No 315
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.53 E-value=5.2e-14 Score=149.60 Aligned_cols=169 Identities=18% Similarity=0.176 Sum_probs=122.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCE-EEEEecCCCcHHH-HHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYT-VHATVKNLSDERE-TAHLKALEGADTRLRLFQIDLLDYDAIAAAVT----- 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (323)
.+|+++||||+|.||.++++.|+++|++ |++++|+..+... .+..+.+...+.++.++.+|++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 4688999999999999999999999996 7778887654322 22333333334578889999999998887664
Q ss_pred -CCCEEEEcccCCcc----CCCCCchhhhhhHHHHHHHHHHHHHhhC--CcCEEEEecccccccCCCCCCCCccccCCCC
Q 020608 77 -GCTGVFHLASPCIV----DKVEDPQNQLLNPAVKGTVNVLTAAKAL--GVKRVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 77 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
.+|+|||+||.... ..+.+.+...+++|+.|+.++.+++... ..++||++||.++..+....
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~----------- 2031 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ----------- 2031 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC-----------
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc-----------
Confidence 57999999997532 1256778899999999999998887543 24699999999777665431
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMG 194 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G 194 (323)
..|+.+|...+.+++... ..|++...+-.+.+-+
T Consensus 2032 ----------~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2032 ----------ANYGFANSAMERICEKRR-HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp ----------HHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBCT
T ss_pred ----------HHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcCC
Confidence 349999999999998665 4588888888776543
No 316
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=99.41 E-value=1.8e-12 Score=95.30 Aligned_cols=96 Identities=28% Similarity=0.311 Sum_probs=76.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC-CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
.++|+|+|+|+ |++|+.+++.|++.| ++|++++|++.. .+.+. ..++.++.+|+++.+.+.++++++|+|
T Consensus 3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~---~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA---LAVLN-----RMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH---HHHHH-----TTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH---HHHHH-----hCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 46789999999 999999999999999 999999986422 22222 236788899999999999999999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEE
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVV 125 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 125 (323)
||+++.. ...++++++.+.+++.+.+
T Consensus 74 i~~~~~~------------------~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 74 ISAAPFF------------------LTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp EECSCGG------------------GHHHHHHHHHHTTCEEECC
T ss_pred EECCCch------------------hhHHHHHHHHHhCCCEEEe
Confidence 9998531 1356888888888755443
No 317
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.38 E-value=4.6e-13 Score=116.43 Aligned_cols=179 Identities=13% Similarity=0.062 Sum_probs=116.0
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC-------EEEEEecCCCc-HHHH-HHHhhccCCCCCeEEEEccCCCHhHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY-------TVHATVKNLSD-ERET-AHLKALEGADTRLRLFQIDLLDYDAI 71 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (323)
|+.+.|||+||||+||||++++..|+..|. +|++++++.+. .... .....+.+....+ ..|++...++
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~ 77 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADP 77 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCc
Confidence 654568999999999999999999999885 78888765100 1111 1112222211111 2455555567
Q ss_pred HHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cC-EEEEecccccccCCCCCCCCccccCCCC
Q 020608 72 AAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VK-RVVVTSSISSITPSPKWPADKVKDEDCW 149 (323)
Q Consensus 72 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~~e~~~ 149 (323)
.++++++|+|||+|+.... ......+.+..|+..++++++++.+++ .+ +||++|.-...... ...+..+
T Consensus 78 ~~al~~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~-------~~~~~~~ 148 (329)
T 1b8p_A 78 MTAFKDADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY-------IAMKSAP 148 (329)
T ss_dssp HHHTTTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-------HHHHTCT
T ss_pred HHHhCCCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH-------HHHHHcC
Confidence 8889999999999996432 223345688999999999999998884 55 89999874211000 0000000
Q ss_pred CChhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCC
Q 020608 150 TDEEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPV 196 (323)
Q Consensus 150 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~ 196 (323)
. ++ +...++.+++...++...+++..|++...++...|+|.+
T Consensus 149 ~---~p--~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 149 S---LP--AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp T---SC--GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred C---CC--HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence 0 00 013488888888888888888888887778877788854
No 318
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=99.23 E-value=6.4e-11 Score=102.63 Aligned_cols=118 Identities=16% Similarity=0.060 Sum_probs=83.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++|||+||||+||+|+.++..|+++| ++|+++++++. . .....+........ +.+ +.+..++.++++++|+|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~---~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-P---GVTADISHMDTGAV-VRG-FLGQQQLEAALTGMDLI 80 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-H---HHHHHHHTSCSSCE-EEE-EESHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-H---hHHHHhhcccccce-EEE-EeCCCCHHHHcCCCCEE
Confidence 45799999999999999999999998 79999887653 1 11111221111111 112 33456778889999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
||+|+....+ .......+..|+.+++++++++.+.+.+.+|+++|.
T Consensus 81 i~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 81 IVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp EECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred EEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 9999864322 122345789999999999999999887777777764
No 319
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=99.13 E-value=9e-10 Score=95.63 Aligned_cols=175 Identities=13% Similarity=-0.010 Sum_probs=109.9
Q ss_pred CCceEEEeccccHHHHHHHHHHH-HCCCEEEEEecCCCcHHH----------HHHHhhccCCCCCeEEEEccCCCHhHHH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLL-ERRYTVHATVKNLSDERE----------TAHLKALEGADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (323)
..|++|||||+..||.+.+..|+ ..|..|+++.|.....+. ....+.....+.....+.+|+.+.+.++
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 46899999999999999999998 579999999876543211 1111222333567889999999999988
Q ss_pred HHhc-------CCCEEEEcccCCccCCC---------CCch---------------------hhhhhHHHHHHHHH----
Q 020608 73 AAVT-------GCTGVFHLASPCIVDKV---------EDPQ---------------------NQLLNPAVKGTVNV---- 111 (323)
Q Consensus 73 ~~~~-------~~d~Vih~a~~~~~~~~---------~~~~---------------------~~~~~~n~~~~~~l---- 111 (323)
++++ ++|+|||++|....... .++. ...-+..+.+|..+
T Consensus 129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s 208 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE 208 (401)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence 8766 67999999997532110 0000 00001122222221
Q ss_pred ----H-HHHhhCC----cCEEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCchHHHHHHHHHHHHHHHHhC-C
Q 020608 112 ----L-TAAKALG----VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIWYPLSKTLAEKAAWEFAKEK-G 181 (323)
Q Consensus 112 ----~-~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~ 181 (323)
+ .+....+ -.++|-+|+.+.....+. | ....+|.+|...|..++.++.+. +
T Consensus 209 ~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~----------------Y---~~G~mG~AKaaLEa~~r~La~eL~~ 269 (401)
T 4ggo_A 209 DWERWIKQLSKEGLLEEGCITLAYSYIGPEATQAL----------------Y---RKGTIGKAKEHLEATAHRLNKENPS 269 (401)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHH----------------H---TTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhhcccCCceEEEEeccCcceeecC----------------C---CccHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 2222221 247787777633211110 0 11348999999999999998886 6
Q ss_pred ccEEEEcCCCccCCCC
Q 020608 182 LDVVVVNPGTVMGPVI 197 (323)
Q Consensus 182 ~~~~~~Rp~~v~G~~~ 197 (323)
+++.++-++.+..+..
T Consensus 270 ~~a~v~v~~a~vT~As 285 (401)
T 4ggo_A 270 IRAFVSVNKGLVTRAS 285 (401)
T ss_dssp EEEEEEECCCCCCTTG
T ss_pred CcEEEEEcCccccchh
Confidence 7777777877777643
No 320
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=99.08 E-value=2.2e-10 Score=97.75 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=64.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++|+++||||+|++|++++..|++.|++|++++|+.++... ..+.+... .++.++.+|+++.+++.++++++|+||
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~--l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA--AADSVNKR-FKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--HHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHH--HHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 567999999999999999999999999999999987432221 12222110 135667899999999999999999999
Q ss_pred EcccC
Q 020608 83 HLASP 87 (323)
Q Consensus 83 h~a~~ 87 (323)
|+|+.
T Consensus 194 n~ag~ 198 (287)
T 1lu9_A 194 TAGAI 198 (287)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99975
No 321
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=99.08 E-value=6e-10 Score=96.07 Aligned_cols=170 Identities=12% Similarity=0.067 Sum_probs=103.2
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHH----HHhhc-cCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETA----HLKAL-EGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|||+||||+||+|++++..|+..|. ++.++++.. +....+ .+... ...+....+..++ +++.++++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~-~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~ga 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH-SINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDES 75 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG-GHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCC-chhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCC
Confidence 4899999999999999999998885 677776611 111111 11111 1111222322221 2245568899
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+|||+|+.... ........++.|+.+++++++++++++ +.+|+++|- -+.... ....+... . .+
T Consensus 76 D~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN-Pv~~~t----~~~~k~~~-~------p~ 140 (313)
T 1hye_A 76 DVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN-PVDVMT----YKALVDSK-F------ER 140 (313)
T ss_dssp SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS-SHHHHH----HHHHHHHC-C------CT
T ss_pred CEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC-cHHHHH----HHHHHhhC-c------Ch
Confidence 999999986432 122345678999999999999999988 877777775 211110 00000000 0 11
Q ss_pred CCchHH-HHHHHHHHHHHHHHhCCccEEEEcCCCccCCC
Q 020608 159 EIWYPL-SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPV 196 (323)
Q Consensus 159 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~ 196 (323)
...+|. +.+...++...+++..|++...++. .++|.+
T Consensus 141 ~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 141 NQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH 178 (313)
T ss_dssp TSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred hcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence 245777 7776777777777777776555554 566644
No 322
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=99.02 E-value=3.3e-09 Score=80.47 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=72.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~V 81 (323)
++|++|+|+|+ |.+|+.+++.|.+.|++|++++|++ .. .+.+.. .....+.+|.++.+.+.++ +.++|+|
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~---~~---~~~~~~--~~~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE---EK---VNAYAS--YATHAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH---HH---HHTTTT--TCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH---HH---HHHHHH--hCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 46788999998 9999999999999999999998853 11 222221 1346788999998888775 6789999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
|++++.. .+.|. .+...+++.+.++++..++.
T Consensus 75 i~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 75 IVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp EECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred EECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence 9998631 12232 35566777777777776665
No 323
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.99 E-value=3.6e-09 Score=80.16 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=58.5
Q ss_pred CC-CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCC
Q 020608 1 MS-KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGC 78 (323)
Q Consensus 1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~ 78 (323)
|+ ++|++|+|+|+ |.+|+.+++.|.+.|++|+++++++. ..+.+.. .++.++.+|.++++.++++ ++++
T Consensus 1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~---~~~~~~~-----~~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKE---KIELLED-----EGFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH---HHHHHHH-----TTCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHH---HHHHHHH-----CCCcEEECCCCCHHHHHhCCcccC
Confidence 54 35789999997 99999999999999999999988642 2222222 2577889999999988876 4578
Q ss_pred CEEEEccc
Q 020608 79 TGVFHLAS 86 (323)
Q Consensus 79 d~Vih~a~ 86 (323)
|+||.+.+
T Consensus 72 d~vi~~~~ 79 (141)
T 3llv_A 72 SAVLITGS 79 (141)
T ss_dssp SEEEECCS
T ss_pred CEEEEecC
Confidence 99998764
No 324
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.99 E-value=4.1e-09 Score=90.37 Aligned_cols=167 Identities=14% Similarity=0.082 Sum_probs=98.6
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEec--CCCcHHHHHHHhhccC---CCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVK--NLSDERETAHLKALEG---ADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|||+||||+|++|+.++..|+..|. ++.++++ +..... .....+.+ ....+.+.. + + .++++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~--~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~a 71 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTV--GQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGS 71 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHH--HHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHH--HHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCC
Confidence 5899999999999999999999885 6777766 321111 10111111 122334333 2 2 3347899
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccccccCCCCCCCCccccCCCCCChhhhccC
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQN 158 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 158 (323)
|+|||+|+....+ .......+..|+.+++++++++++++.+.+|+++|- -+.... ....+.. ... +
T Consensus 72 DvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN-Pv~~~~----~~~~~~~-~~p------~ 137 (303)
T 1o6z_A 72 DVVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN-PVDLLN----RHLYEAG-DRS------R 137 (303)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS-SHHHHH----HHHHHHS-SSC------G
T ss_pred CEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC-hHHHHH----HHHHHHc-CCC------H
Confidence 9999999864322 223346789999999999999999987777777765 111100 0000000 000 0
Q ss_pred CCchHH-HHHHHHHHHHHHHHhCCccEEEEcCCCccCCC
Q 020608 159 EIWYPL-SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPV 196 (323)
Q Consensus 159 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~ 196 (323)
....|. +-+..-++....++..|++..-++ ..++|.+
T Consensus 138 ~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H 175 (303)
T 1o6z_A 138 EQVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH 175 (303)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred HHeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence 133555 444444555555555566555555 6777754
No 325
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.88 E-value=6.2e-09 Score=94.10 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=75.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++|+|+|+| +|++|+++++.|++.|++|++.+|+.. ..+. +.....++..+.+|++|.+++.++++++|+|||
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~---~a~~---la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLE---SAKK---LSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHH---HHHH---TTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHH---HHHH---HHHhcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence 578999998 799999999999999999999988642 2122 211112477889999999999999999999999
Q ss_pred cccCCccCCCCCchhhhhhH--H-------HHHHHHHHHHHhhCCcC
Q 020608 84 LASPCIVDKVEDPQNQLLNP--A-------VKGTVNVLTAAKALGVK 121 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~~ 121 (323)
+++...... .....++. | ...+.+++++|++.|++
T Consensus 75 ~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~ 118 (450)
T 1ff9_A 75 LIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT 118 (450)
T ss_dssp CCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred CCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence 998632110 00111111 1 23577889999988863
No 326
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.83 E-value=1.1e-07 Score=71.64 Aligned_cols=100 Identities=13% Similarity=0.103 Sum_probs=68.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi 82 (323)
.+|+|+|+|+ |++|+.+++.|.+.|++|++++|++.. .+.+... .++.++.+|.++.+.+.+. ++++|+||
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~---~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI---CKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HHHHHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 4579999986 999999999999999999999886422 2222110 1456788999998877655 67899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecc
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSS 128 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 128 (323)
++.+. + ..|. .+...++..+.+++|..++
T Consensus 75 ~~~~~--------~-----~~~~----~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 75 AVTGK--------E-----EVNL----MSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp ECCSC--------H-----HHHH----HHHHHHHHTTCCCEEEECS
T ss_pred EeeCC--------c-----hHHH----HHHHHHHHcCCCEEEEEec
Confidence 99742 1 1222 3455666666667665443
No 327
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.79 E-value=3.6e-08 Score=88.03 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=73.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC---CEEEEEecCCCcHHHHHHHhhccC-CCCCeEEEEccCCCHhHHHHHhcC--C
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR---YTVHATVKNLSDERETAHLKALEG-ADTRLRLFQIDLLDYDAIAAAVTG--C 78 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~--~ 78 (323)
|++|+|+|| |+||+.+++.|++.| .+|++.+|+..+... ..+.+.. ...++..+.+|++|.+++++++++ +
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~--la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~ 77 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQE--IAQSIKAKGYGEIDITTVDADSIEELVALINEVKP 77 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHH--HHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHH--HHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCC
Confidence 479999998 999999999999998 389999987533222 2222221 123588899999999999999987 8
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEec
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTS 127 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 127 (323)
|+|||+++.. . ...++++|.+.++ +++-++
T Consensus 78 DvVin~ag~~------------~------~~~v~~a~l~~g~-~vvD~a 107 (405)
T 4ina_A 78 QIVLNIALPY------------Q------DLTIMEACLRTGV-PYLDTA 107 (405)
T ss_dssp SEEEECSCGG------------G------HHHHHHHHHHHTC-CEEESS
T ss_pred CEEEECCCcc------------c------ChHHHHHHHHhCC-CEEEec
Confidence 9999999741 0 1356777777774 444443
No 328
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.73 E-value=2.1e-08 Score=86.71 Aligned_cols=119 Identities=18% Similarity=0.048 Sum_probs=78.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC--E-----EEEEecCCCcHHHHHHHhhccCCC-CCeEEEEccCCCHhHHHHHhc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY--T-----VHATVKNLSDERETAHLKALEGAD-TRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
.+||+||||+|+||++++..|+..|. + ++++++++...........+.+.. +-.. ++.-.+...+.++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence 47999999999999999999998775 4 888876532111112222222211 1111 2222223456688
Q ss_pred CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC--EEEEeccc
Q 020608 77 GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK--RVVVTSSI 129 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~ 129 (323)
++|+|||+||.... ...+..+.++.|+..++++++++++++.+ +++.+|.-
T Consensus 79 daDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 79 DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 99999999986432 22344568899999999999999988754 67777754
No 329
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.68 E-value=5.4e-07 Score=69.02 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=60.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi 82 (323)
..++|+|+|+ |.+|+.+++.|.+.|++|+++.|++. +..+.+.... ..++.++.+|.++++.+.++ ++++|.||
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~--~~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPE--DDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCH--HHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCh--HHHHHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 5678999996 99999999999999999999988631 1111221111 13678899999999999887 88999999
Q ss_pred Eccc
Q 020608 83 HLAS 86 (323)
Q Consensus 83 h~a~ 86 (323)
-+.+
T Consensus 77 ~~~~ 80 (153)
T 1id1_A 77 ALSD 80 (153)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8864
No 330
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.68 E-value=5.6e-08 Score=78.91 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=54.7
Q ss_pred CCceEEEecc----------------ccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCC
Q 020608 4 EAEVVCVTGG----------------SGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLD 67 (323)
Q Consensus 4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 67 (323)
++|+|||||| ||.+|.+++++|+++|++|+++.|+..... ....++.. .|++.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---------~~~~~~~~--~~v~s 70 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---------EPHPNLSI--REITN 70 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---------CCCTTEEE--EECCS
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------cCCCCeEE--EEHhH
Confidence 6899999999 999999999999999999999998642110 00124443 45555
Q ss_pred HhHHH----HHhcCCCEEEEcccCCcc
Q 020608 68 YDAIA----AAVTGCTGVFHLASPCIV 90 (323)
Q Consensus 68 ~~~~~----~~~~~~d~Vih~a~~~~~ 90 (323)
.+++. +.+.++|++||+||...+
T Consensus 71 ~~em~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 71 TKDLLIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp HHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCccccc
Confidence 54433 345579999999997644
No 331
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.67 E-value=2.2e-07 Score=81.90 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=70.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
-+.|||+|.|| |++|+.+++.|. +.++|.+.+|+.. ..+.+. .....+..|+.|.+++.++++++|+||
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~---~~~~~~------~~~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNE---NLEKVK------EFATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHH---HHHHHT------TTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHH---HHHHHh------ccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence 35678999998 999999999886 4689999888642 222221 246678899999999999999999999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEec
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTS 127 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 127 (323)
++++.. + ...++++|.+.++ ++|=+|
T Consensus 83 ~~~p~~------------~------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 83 GALPGF------------L------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp ECCCGG------------G------HHHHHHHHHHHTC-EEEECC
T ss_pred EecCCc------------c------cchHHHHHHhcCc-ceEeee
Confidence 998641 1 1247788888874 776654
No 332
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.65 E-value=2.6e-07 Score=79.46 Aligned_cols=114 Identities=18% Similarity=0.126 Sum_probs=79.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCCCC--CeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGADT--RLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|||.|+||+|++|+.++..|++.| .+|+++++++ .. .....+.+... +++...+ .++++++++++|+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~---~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TP---GVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HH---HHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cH---HHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEE
Confidence 489999999999999999999888 7999999875 11 12222222111 1222211 23577788999999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
|++|+....+. ..-.+.+..|+..++.+++.+.+.+.. ++|++|--
T Consensus 73 vi~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 73 VIPAGVPRKPG--MTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp EECCSCCCCTT--CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred EECCCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 99998743322 223457889999999999998887643 77776554
No 333
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.65 E-value=1e-07 Score=77.21 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=56.1
Q ss_pred CCCceEEEecc----------------ccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCC
Q 020608 3 KEAEVVCVTGG----------------SGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLL 66 (323)
Q Consensus 3 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 66 (323)
+++|+|||||| ||.||.+++++|+++|++|+++.|+..- . . ..++. ..|++
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-------~---~~g~~--~~dv~ 72 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-------T---PPFVK--RVDVM 72 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-------C---CTTEE--EEECC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-------c---CCCCe--EEccC
Confidence 57899999999 6999999999999999999998775421 0 0 11333 46888
Q ss_pred CHhHHHHH----hcCCCEEEEcccCCc
Q 020608 67 DYDAIAAA----VTGCTGVFHLASPCI 89 (323)
Q Consensus 67 ~~~~~~~~----~~~~d~Vih~a~~~~ 89 (323)
+.+++.+. +.++|++||+||...
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence 86655443 457899999999764
No 334
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.62 E-value=4.3e-07 Score=69.77 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=57.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi 82 (323)
.+++|+|+|+ |.+|+.+++.|.+.|++|+++.|++.... .+.. ..+...+.+|..+.+.+.++ ++++|+||
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~------~~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH------RLNS-EFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG------GSCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH------HHHh-cCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4679999996 99999999999999999999998753321 2210 12456778999888877765 67899999
Q ss_pred Eccc
Q 020608 83 HLAS 86 (323)
Q Consensus 83 h~a~ 86 (323)
.+.+
T Consensus 90 ~~~~ 93 (155)
T 2g1u_A 90 AFTN 93 (155)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 9875
No 335
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.62 E-value=5.5e-08 Score=88.09 Aligned_cols=79 Identities=15% Similarity=0.215 Sum_probs=61.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
++++++|+|+|+ |++|+++++.|++. |++|++.+|+.++. +.+... .++..+.+|+.|.+++.++++++|+
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka---~~la~~----~~~~~~~~D~~d~~~l~~~l~~~Dv 91 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA---QALAKP----SGSKAISLDVTDDSALDKVLADNDV 91 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH---HHHHGG----GTCEEEECCTTCHHHHHHHHHTSSE
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH---HHHHHh----cCCcEEEEecCCHHHHHHHHcCCCE
Confidence 356889999997 99999999999998 78999999864222 222111 1466778999999999999999999
Q ss_pred EEEcccCC
Q 020608 81 VFHLASPC 88 (323)
Q Consensus 81 Vih~a~~~ 88 (323)
|||+++..
T Consensus 92 VIn~tp~~ 99 (467)
T 2axq_A 92 VISLIPYT 99 (467)
T ss_dssp EEECSCGG
T ss_pred EEECCchh
Confidence 99999763
No 336
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.47 E-value=4.6e-08 Score=82.26 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHH-CCCEEEEEecC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLE-RRYTVHATVKN 38 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~ 38 (323)
|.+++++|.|+|++|.+|+.+++.+++ .|+++++..+.
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 777788999999999999999999885 47888865543
No 337
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.45 E-value=1.4e-06 Score=68.88 Aligned_cols=74 Identities=15% Similarity=0.021 Sum_probs=58.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH--hcCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA--VTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~ 80 (323)
.+++|+|+| .|.+|+.+++.|.+. |++|++++|++.. .+.+.. .++..+.+|.++.+.+.++ ++++|.
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~---~~~~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEA---AQQHRS-----EGRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHH---HHHHHH-----TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHH---HHHHHH-----CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 457899998 599999999999999 9999999886422 222222 1566788999999888877 778999
Q ss_pred EEEccc
Q 020608 81 VFHLAS 86 (323)
Q Consensus 81 Vih~a~ 86 (323)
||.+.+
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998764
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.39 E-value=3.6e-06 Score=68.47 Aligned_cols=73 Identities=19% Similarity=0.196 Sum_probs=57.6
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEEEc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVFHL 84 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 84 (323)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++.. .+.+... .+..++.+|.++.+.+.++ ++++|.||-+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~---~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDREL---CEEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHH---HHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 57999996 999999999999999999999886422 2222111 1577899999999998886 6789999976
Q ss_pred cc
Q 020608 85 AS 86 (323)
Q Consensus 85 a~ 86 (323)
.+
T Consensus 73 ~~ 74 (218)
T 3l4b_C 73 TP 74 (218)
T ss_dssp CS
T ss_pred cC
Confidence 53
No 339
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.30 E-value=7.5e-07 Score=77.17 Aligned_cols=118 Identities=13% Similarity=0.043 Sum_probs=75.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHH-HHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERE-TAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
|+++||.|+|++|++|+.++..|+..| .+|++++++...... ...+........++. -..++.++++++|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-------~t~d~~~al~dAD 78 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-------FTSDIKEALTDAK 78 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-------EESCHHHHHTTEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-------EcCCHHHHhCCCC
Confidence 457899999999999999999999998 489999875321111 011111111111222 1124566788999
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCE--EEEeccc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKR--VVVTSSI 129 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~v~~SS~ 129 (323)
+||.+||...-+ ...-.+.+..|+...+.+.+.+.+++.+- ++.+|.-
T Consensus 79 vVvitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 79 YIVSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 999999863221 22334578899999999999998876443 5666543
No 340
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.29 E-value=2.9e-06 Score=63.85 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=57.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 83 (323)
.++|+|.|+ |.+|+.+++.|.+.|++|+++++++.. .+.+.. .++..+.+|.++.+.++++ ++++|.||-
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~---~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR---VDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH---HHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH---HHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 368999996 999999999999999999999986422 222222 2678899999999988775 568899987
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+.+
T Consensus 78 ~~~ 80 (140)
T 3fwz_A 78 TIP 80 (140)
T ss_dssp CCS
T ss_pred ECC
Confidence 764
No 341
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=98.23 E-value=5.2e-06 Score=70.99 Aligned_cols=84 Identities=6% Similarity=-0.001 Sum_probs=60.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHH-hhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHL-KALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++..|+....+..+.+ +.+... ........++.+.+++.+.+.++|+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhcCCCE
Confidence 56899999997 8999999999999998 899999984323333322 222111 1233445577777778888889999
Q ss_pred EEEcccCC
Q 020608 81 VFHLASPC 88 (323)
Q Consensus 81 Vih~a~~~ 88 (323)
||++....
T Consensus 230 IINaTp~G 237 (315)
T 3tnl_A 230 FTNATGVG 237 (315)
T ss_dssp EEECSSTT
T ss_pred EEECccCC
Confidence 99998654
No 342
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.22 E-value=1.5e-05 Score=68.56 Aligned_cols=119 Identities=15% Similarity=0.096 Sum_probs=77.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHH-HHHhhc-cCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERET-AHLKAL-EGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
|...++||.|+|+ |++|+.++..|+..|. +|++++++....... ..+... +.....+....+|. +.++
T Consensus 1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~~ 72 (326)
T 3pqe_A 1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDCK 72 (326)
T ss_dssp -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGGT
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-------HHhC
Confidence 6666789999996 9999999999999986 899998753221110 011111 11112344443332 3577
Q ss_pred CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 77 GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
++|+||.+||...- ....-...+..|+.-...+.+.+.+++.+ .++.+|.-
T Consensus 73 ~aDvVvi~ag~p~k--pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 73 DADIVCICAGANQK--PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp TCSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCEEEEecccCCC--CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 89999999986322 12234557889999999999999887643 56665543
No 343
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.18 E-value=4.1e-06 Score=66.99 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=62.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHH---HHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIA---AAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~--~~ 78 (323)
.+++|+|+||+|.||..+++.+...|++|++++|++ +..+.+.++ +... ..|.++.+..+ +... ++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~---~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD---AKREMLSRL---GVEY---VGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH---HHHHHHHTT---CCSE---EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHc---CCCE---EeeCCcHHHHHHHHHHhCCCCC
Confidence 468999999999999999999999999999998853 222233332 1121 23665544333 3332 58
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
|+||++++. . .....++.++.. +++|.+++.
T Consensus 109 D~vi~~~g~----------~--------~~~~~~~~l~~~--G~~v~~g~~ 139 (198)
T 1pqw_A 109 DVVLNSLAG----------E--------AIQRGVQILAPG--GRFIELGKK 139 (198)
T ss_dssp EEEEECCCT----------H--------HHHHHHHTEEEE--EEEEECSCG
T ss_pred eEEEECCch----------H--------HHHHHHHHhccC--CEEEEEcCC
Confidence 999999862 0 122334444443 489998876
No 344
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.18 E-value=2.1e-05 Score=69.04 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=56.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++++|+|.|+ |++|+.+++.|++. ++|++.+|+.++ .+.+.. .......|+.+.++++++++++|+||+
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~~~~---a~~la~------~~~~~~~d~~~~~~l~~ll~~~DvVIn 83 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNEN---LEKVKE------FATPLKVDASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHH---HHHHTT------TSEEEECCTTCHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECCHHH---HHHHHh------hCCeEEEecCCHHHHHHHHhCCCEEEE
Confidence 4689999996 99999999999988 999999986422 222211 234567899999999999999999999
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+..
T Consensus 84 ~~P 86 (365)
T 2z2v_A 84 ALP 86 (365)
T ss_dssp CCC
T ss_pred CCC
Confidence 863
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=98.14 E-value=4.4e-06 Score=73.06 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=52.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh----c-CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV----T-GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~-~~ 78 (323)
.+++|||+|++|.||..+++.+...|++|+++.|++.+.+ .++++. .. ...|+++.+++.+.+ . ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~---~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE---LFRSIG---GE---VFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH---HHHHTT---CC---EEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH---HHHHcC---Cc---eEEecCccHhHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999998764332 222321 11 123665433333322 2 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||++++.
T Consensus 240 D~vi~~~g~ 248 (347)
T 2hcy_A 240 HGVINVSVS 248 (347)
T ss_dssp EEEEECSSC
T ss_pred CEEEECCCc
Confidence 999999873
No 346
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=98.09 E-value=1.5e-05 Score=65.50 Aligned_cols=71 Identities=13% Similarity=0.016 Sum_probs=56.5
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 83 (323)
.++|+|.|+ |.+|+.+++.|.+.|+ |+++.|++... +.+. .++.++.+|.++.+.++++ ++++|.||.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~---~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK---KVLR------SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH---HHHH------TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH---HHHh------cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 468999997 9999999999999999 99987764322 2221 2578899999999999877 789999998
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+.+
T Consensus 78 ~~~ 80 (234)
T 2aef_A 78 DLE 80 (234)
T ss_dssp CCS
T ss_pred cCC
Confidence 763
No 347
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.01 E-value=7.2e-05 Score=64.05 Aligned_cols=116 Identities=17% Similarity=0.134 Sum_probs=76.4
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCC-CcHHHHHHHhhcc------CCCCCeEEEEccCCCHhHHH
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNL-SDERETAHLKALE------GADTRLRLFQIDLLDYDAIA 72 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~ 72 (323)
|.|++++|.|+|+ |.+|+.++..|+..|+ +|+++++++ .....-.. ..+. ....++.. ..| .
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a-~dl~~~~~~~~~~~~i~~-t~d---~---- 73 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKA-LDMLEASPVQGFDANIIG-TSD---Y---- 73 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHH-HHHHHHHHHHTCCCCEEE-ESC---G----
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhh-hhHHHhhhhccCCCEEEE-cCC---H----
Confidence 6666789999996 9999999999999999 999998863 11111111 1111 01112221 122 2
Q ss_pred HHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 73 AAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 73 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
+.++++|+||-+||...-+ ...-.+.+..|+.-...+.+.+.+++.+ .++.+|.
T Consensus 74 ~a~~~aDvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 74 ADTADSDVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp GGGTTCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HHhCCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 3478899999999864322 2233567889999999999998877643 6666664
No 348
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.00 E-value=9.9e-05 Score=63.83 Aligned_cols=116 Identities=22% Similarity=0.151 Sum_probs=73.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHH-HHHh-hcc--CCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERET-AHLK-ALE--GADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~-~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
+.|||.|+|| |.+|+.++..|+..|+ +|+++++++...+.. ..+. ... ....++.. . .++++.++++
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------~d~~ea~~~a 79 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------YSYEAALTGA 79 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------CSHHHHHTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------CCHHHHhCCC
Confidence 3468999998 9999999999999998 999998876443331 1111 111 01112221 1 2345568899
Q ss_pred CEEEEcccCCccCCCCC---chhhhhhHHHHHHHHHHHHHhhCCcC-EEEEec
Q 020608 79 TGVFHLASPCIVDKVED---PQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTS 127 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 127 (323)
|+||-+++...-+..+. .-......|+.-.+.+.+.+.+...+ .++.+|
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 99999997532211100 22345677888888899988777544 344433
No 349
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.00 E-value=3.2e-06 Score=68.41 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=48.3
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|+|+|+||+|++|+.+++.|++.|++|++++|++....... +.... .+. ..|+. .+++.++++++|+||++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~---~~~--~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA--AEYRR---IAG--DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH--HHHHH---HHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHhcc---ccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 47999999999999999999999999999998643222211 11100 000 01222 134556677899999997
Q ss_pred c
Q 020608 86 S 86 (323)
Q Consensus 86 ~ 86 (323)
.
T Consensus 73 ~ 73 (212)
T 1jay_A 73 P 73 (212)
T ss_dssp C
T ss_pred C
Confidence 4
No 350
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.98 E-value=2.4e-05 Score=68.92 Aligned_cols=75 Identities=16% Similarity=0.082 Sum_probs=57.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhh-ccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKA-LEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++|+|+|+ |.||+.+++.|...|++|++++|++.+. +.+.+ + +.. +.+|..+.+++.+++.++|+|
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~---~~~~~~~---g~~---~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL---QYLDDVF---GGR---VITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHT---TTS---EEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH---HHHHHhc---Cce---EEEecCCHHHHHHHHhCCCEE
Confidence 45789999999 9999999999999999999998864222 22222 2 112 456777888888888999999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|++++.
T Consensus 234 i~~~g~ 239 (369)
T 2eez_A 234 IGAVLV 239 (369)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999975
No 351
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.94 E-value=7.5e-05 Score=64.18 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=69.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCC---CCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGA---DTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
+++||.|+|+ |++|..++..|+..|. +|++++++....+. ....+.+. ...+.+. . .+ .+.++++
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g--~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~a 75 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIG--EAMDINHGLPFMGQMSLY-A--GD----YSDVKDC 75 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCH--HHHHHTTSCCCTTCEEEC-----C----GGGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHH--HHHHHHHhHHhcCCeEEE-E--CC----HHHhCCC
Confidence 4578999998 9999999999999987 99999887533221 11122111 1133322 2 22 2347899
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEe
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVT 126 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~ 126 (323)
|+||.+++...-+ ...-.+.+..|+.....+.+.+.+++.+ .++++
T Consensus 76 DvVii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 76 DVIVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp SEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CEEEEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9999999863221 1123456788999999999998876544 44443
No 352
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.91 E-value=0.00013 Score=62.49 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=70.7
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCC----CCCeEEEE-ccCCCHhHHHHHhcCC
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGA----DTRLRLFQ-IDLLDYDAIAAAVTGC 78 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~-~Dl~~~~~~~~~~~~~ 78 (323)
++||.|+|+ |.+|+.++..|+..|+ +|+++++++...+. ....+.+. .....+.. .| + +.++++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g--~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~a 71 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQG--KALDLYEASPIEGFDVRVTGTNN------Y-ADTANS 71 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHH--HHHHHHTTHHHHTCCCCEEEESC------G-GGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHH--HHHhHHHhHhhcCCCeEEEECCC------H-HHHCCC
Confidence 379999998 9999999999999997 98888876543321 11122110 11112111 33 2 347889
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
|+||.+++....+.. .-......|+.....+.+.+.+.+.+.++.+.|-
T Consensus 72 D~Vi~a~g~p~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 72 DVIVVTSGAPRKPGM--SREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp SEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 999999986432211 1234567788888999999888765555544443
No 353
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.90 E-value=3.3e-05 Score=67.04 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=50.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh-----cCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV-----TGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 78 (323)
.+++||||||+|.||..+++.+...|++|++++|+. +..+.++++. .. ...|.++.+++.+.+ .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~---~~~~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD---EKIAYLKQIG---FD---AAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHTT---CS---EEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHhcC---Cc---EEEecCCHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999998853 2223333331 12 224665522222222 258
Q ss_pred CEEEEccc
Q 020608 79 TGVFHLAS 86 (323)
Q Consensus 79 d~Vih~a~ 86 (323)
|+||+++|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999997
No 354
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.90 E-value=3.8e-05 Score=65.57 Aligned_cols=84 Identities=11% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHH-hhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHL-KALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++..|+..+.+..+.+ +.+... .+......++.+.+.+.+.+.++|+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~~~Di 223 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALASADI 223 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhccCceE
Confidence 46899999997 9999999999999998 899999984433333322 222110 1233334466665445666778999
Q ss_pred EEEcccCC
Q 020608 81 VFHLASPC 88 (323)
Q Consensus 81 Vih~a~~~ 88 (323)
||++....
T Consensus 224 IINaTp~G 231 (312)
T 3t4e_A 224 LTNGTKVG 231 (312)
T ss_dssp EEECSSTT
T ss_pred EEECCcCC
Confidence 99998654
No 355
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.88 E-value=6e-05 Score=67.18 Aligned_cols=74 Identities=16% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi 82 (323)
..++|+|.|. |-+|+.+++.|.+.|++|+++++++.. .+.+.. .++.++.||.++++.+.++ ++++|+||
T Consensus 3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~---v~~~~~-----~g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH---IETLRK-----FGMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH---HHHHHH-----TTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH---HHHHHh-----CCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 3578999996 999999999999999999999886532 222222 2567889999999999887 77899998
Q ss_pred Eccc
Q 020608 83 HLAS 86 (323)
Q Consensus 83 h~a~ 86 (323)
-+..
T Consensus 74 v~~~ 77 (413)
T 3l9w_A 74 NAID 77 (413)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7763
No 356
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.86 E-value=7.7e-05 Score=61.79 Aligned_cols=106 Identities=15% Similarity=0.080 Sum_probs=66.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCc-----------------HHHHHHHhhccCCCC--CeEEEEc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSD-----------------ERETAHLKALEGADT--RLRLFQI 63 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~~~~~~~~~~~~--~~~~~~~ 63 (323)
++++|+|.|+ |.+|+++++.|+..|. ++++++++.-. .......+.+...++ .++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3579999995 9999999999999997 88888876511 111122222222122 4556666
Q ss_pred cCCCHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 64 DLLDYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 64 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
++++ +.+.++++++|+||.+... +. .-..+.++|++.++ .+|+.+..
T Consensus 109 ~~~~-~~~~~~~~~~DvVi~~~d~---------~~--------~~~~l~~~~~~~~~-p~i~~~~~ 155 (249)
T 1jw9_B 109 LLDD-AELAALIAEHDLVLDCTDN---------VA--------VRNQLNAGCFAAKV-PLVSGAAI 155 (249)
T ss_dssp CCCH-HHHHHHHHTSSEEEECCSS---------HH--------HHHHHHHHHHHHTC-CEEEEEEE
T ss_pred cCCH-hHHHHHHhCCCEEEEeCCC---------HH--------HHHHHHHHHHHcCC-CEEEeeec
Confidence 6753 5567788899999988632 11 22335556666663 56665443
No 357
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.85 E-value=4.4e-05 Score=66.02 Aligned_cols=176 Identities=16% Similarity=0.068 Sum_probs=101.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-------EEEEEecCCCcHHHHHHHhhccCC--CCCeEEEEccCCCHhHHHHH
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-------TVHATVKNLSDERETAHLKALEGA--DTRLRLFQIDLLDYDAIAAA 74 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~ 74 (323)
+.-||.|+||+|.||+.|+-.|++... ++.+++..+......-....+.+. ......+.++ +..+.
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a 97 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVA 97 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHH
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHH
Confidence 445999999999999999999987642 688777643211111111122211 1112222222 23567
Q ss_pred hcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC-cC-EEEEecccccccCCCCCCCCccccCC-CCCC
Q 020608 75 VTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG-VK-RVVVTSSISSITPSPKWPADKVKDED-CWTD 151 (323)
Q Consensus 75 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~~e~-~~~~ 151 (323)
++++|+||-+||...-+ ...-.+.++.|..-.+.+.+...++. -. +++.+|.-.-.... ...... ..+.
T Consensus 98 ~~~advVvi~aG~prkp--GmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~------i~~~~~~g~~~ 169 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKA--GMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNAL------ILLKSAQGKLN 169 (345)
T ss_dssp TTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH------HHHHHTTTCSC
T ss_pred hCCCCEEEECCCCCCCC--CCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHH------HHHHHccCCCC
Confidence 89999999999874322 22345688999999999999987753 22 56666643100000 000000 0011
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCC
Q 020608 152 EEYCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIP 198 (323)
Q Consensus 152 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~ 198 (323)
+...-+.+.+..-++-...+++.+++...++-..|+|.+..
T Consensus 170 ------~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~ 210 (345)
T 4h7p_A 170 ------PRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS 210 (345)
T ss_dssp ------GGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred ------cceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence 11334555555556666666677887777776677787544
No 358
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.84 E-value=0.00022 Score=61.23 Aligned_cols=116 Identities=19% Similarity=0.155 Sum_probs=74.9
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHH-HHHhhc---cCCCCCeEEEEccCCCHhHHHHHhcC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERET-AHLKAL---EGADTRLRLFQIDLLDYDAIAAAVTG 77 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (323)
|+++||.|+|+ |.+|+.++..|+..|+ +|+++++++...+.. ..+.+. .....++.. ..| . +++++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a~~~ 75 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AAIEG 75 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GGGTT
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HHHCC
Confidence 56789999998 9999999999999998 999999877543211 111111 111112221 233 2 35789
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
+|+||.+|+...-+. ..-.+.+..|+.-...+.+.+.+++.. .++.+|.-
T Consensus 76 aDiVIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 76 ADVVIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp CSEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCEEEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 999999998632211 123356788999999999998877633 66666643
No 359
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.84 E-value=2e-05 Score=68.19 Aligned_cols=74 Identities=11% Similarity=0.044 Sum_probs=51.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHH---HHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIA---AAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|++|++++|++. ..+.+.++. ... ..|.++.+..+ +... ++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~---~~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ---KAQSALKAG---AWQ---VINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHHHT---CSE---EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHcC---CCE---EEECCCccHHHHHHHHhCCCCc
Confidence 4689999999999999999999999999999988632 223333331 121 23555543333 3322 58
Q ss_pred CEEEEccc
Q 020608 79 TGVFHLAS 86 (323)
Q Consensus 79 d~Vih~a~ 86 (323)
|+||+++|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999997
No 360
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.84 E-value=2.3e-05 Score=65.92 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=50.4
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++++++|+|+ |.+|+.++..|++.|.+|++.+|+.++.. +..+.+.... .+. ..|+ +++.+ .++|+||
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~--~la~~~~~~~-~~~--~~~~---~~~~~--~~~DivV 185 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE--ELAKLFAHTG-SIQ--ALSM---DELEG--HEFDLII 185 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH--HHHHHTGGGS-SEE--ECCS---GGGTT--CCCSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHH--HHHHHhhccC-Cee--EecH---HHhcc--CCCCEEE
Confidence 46789999998 78999999999999999999988643222 2222221111 221 2333 22222 5799999
Q ss_pred EcccCCc
Q 020608 83 HLASPCI 89 (323)
Q Consensus 83 h~a~~~~ 89 (323)
++++...
T Consensus 186 n~t~~~~ 192 (271)
T 1nyt_A 186 NATSSGI 192 (271)
T ss_dssp ECCSCGG
T ss_pred ECCCCCC
Confidence 9998643
No 361
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.81 E-value=0.00012 Score=62.98 Aligned_cols=113 Identities=14% Similarity=0.186 Sum_probs=65.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCC---CCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGA---DTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
.++||.|+|+ |.+|+.++..|+..|. +++++++++.... .....+.+. ...+....+| . +.++++
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~--g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~a 77 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTK--GDAIDLEDALPFTSPKKIYSAE---Y----SDAKDA 77 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHH--HHHHHHHTTGGGSCCCEEEECC---G----GGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHH--HHHhhHhhhhhhcCCcEEEECc---H----HHhcCC
Confidence 5689999996 9999999999999886 8999987532211 111112111 1234444333 2 347889
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|+||++||...-+ ...-.+.++.|+.-...+.+.+.+++.+ .++.+|.
T Consensus 78 DiVvi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 78 DLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp SEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CEEEECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 9999999863221 1223457788999999999998887643 5666554
No 362
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.81 E-value=1.7e-05 Score=68.89 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=60.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC-----C-EEEEEecCCCcHHHHH-HHhhccCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR-----Y-TVHATVKNLSDERETA-HLKALEGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
+|++|+|.||||++|+.|++.|++++ + +++.+.+..+...... ....+... .++.+ .|+ +.+ .+.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~-~~~~~--~~~-~~~----~~~ 79 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL-AHRVV--EPT-EAA----VLG 79 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG-TTCBC--EEC-CHH----HHT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc-ceeee--ccC-CHH----Hhc
Confidence 46899999999999999999999887 4 7887764332111100 00001000 01111 122 222 256
Q ss_pred CCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccccc
Q 020608 77 GCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSISS 131 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~ 131 (323)
++|+||-+.+... +..++..+ +.| .++|-+|+...
T Consensus 80 ~~DvVf~alg~~~------------------s~~~~~~~-~~G-~~vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHGH------------------SAVLAQQL-SPE-TLIIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTSC------------------CHHHHHHS-CTT-SEEEECSSTTT
T ss_pred CCCEEEECCCCcc------------------hHHHHHHH-hCC-CEEEEECCCcc
Confidence 8999999986521 33455666 666 48888888743
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.78 E-value=2.5e-05 Score=67.74 Aligned_cols=75 Identities=17% Similarity=0.204 Sum_probs=51.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhH---HHHHh--cCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDA---IAAAV--TGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~--~~~ 78 (323)
.+++|||+||+|.||..+++.+...|++|++++|+.. ..+.++++. ... ..|.++.+. +.+.. .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~---~~~~~~~~g---~~~---~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE---KAETARKLG---CHH---TINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHT---CSE---EEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHcC---CCE---EEECCCHHHHHHHHHHhCCCCC
Confidence 4679999999999999999999999999999988642 223333331 121 235554333 33333 268
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||+++|.
T Consensus 216 d~vi~~~g~ 224 (333)
T 1wly_A 216 DVVYDSIGK 224 (333)
T ss_dssp EEEEECSCT
T ss_pred eEEEECCcH
Confidence 999999974
No 364
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.76 E-value=0.00031 Score=60.27 Aligned_cols=116 Identities=16% Similarity=0.079 Sum_probs=76.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHH-HHHhhcc-CCCCCeEEE-EccCCCHhHHHHHhcCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERET-AHLKALE-GADTRLRLF-QIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~-~~Dl~~~~~~~~~~~~~ 78 (323)
|+++||.|+|+ |.+|+.++..|+..|. +|+++++++...... ..+.+.. .......+. ..| . +.++++
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d---~----~a~~~a 74 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND---Y----KDLENS 74 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC---H----HHHCCC
Confidence 56789999995 9999999999999988 999998876543211 1111110 001122222 122 2 357889
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|+||.+|+...-+ ...-.+.+..|+.-...+.+.+.+++.+ .++.+|.
T Consensus 75 DvVIi~ag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 75 DVVIVTAGVPRKP--GMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CEEEEcCCcCCCC--CCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 9999999863221 1233457788999999999998887644 6666654
No 365
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.72 E-value=0.00031 Score=59.50 Aligned_cols=167 Identities=10% Similarity=0.009 Sum_probs=96.2
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHH-HHHHhhc-cCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERE-TAHLKAL-EGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|||.|+|+ |.+|+.++..|+..|+ +|.++++++...+. ...+... ........+... +| .++++++|+|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence 58999998 9999999999999998 99999886533221 0111111 111112222211 12 3357889999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecccccccCCCCCCCCccccCCCCCChhhhccCCC
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEI 160 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 160 (323)
|.+|+...-+ ...-.+.+..|+.-...+.+.+.+++.+ .++++|.-.-... ....+... .+ +..
T Consensus 74 Viaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t------~~~~k~~g-~p------~~r 138 (294)
T 1oju_A 74 VVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMT------YIMWKESG-KP------RNE 138 (294)
T ss_dssp EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHH------HHHHHHSC-CC------TTS
T ss_pred EECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHH------HHHHHhcC-CC------HHH
Confidence 9999864221 1234567888999999999999888643 6666664311100 00000000 00 113
Q ss_pred chHH-HHHHHHHHHHHHHHhCCccEEEEcCCCccCCCC
Q 020608 161 WYPL-SKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVI 197 (323)
Q Consensus 161 ~Y~~-sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~ 197 (323)
..|. +-+..-++-...+ +.+++... -+.|+|.+.
T Consensus 139 viG~gt~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg 173 (294)
T 1oju_A 139 VFGMGNQLDSQRLKERLY-NAGARNIR--RAWIIGEHG 173 (294)
T ss_dssp EEECSHHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSS
T ss_pred EeecccccHHHHHHHHHH-HhCCCccC--ceEEEecCC
Confidence 3455 3444455555556 66776655 567777763
No 366
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.71 E-value=0.00045 Score=59.33 Aligned_cols=115 Identities=15% Similarity=0.120 Sum_probs=73.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHH-HHHHhh-ccCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERE-TAHLKA-LEGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
|+++||.|+|+ |.+|+.++..|+..|. +|.++++++..... ...+.. .+..+..+.+.. | + .++++++
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a 75 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA 75 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence 45679999998 9999999999998884 89888775422211 011111 111112333332 2 2 3347899
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEec
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTS 127 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 127 (323)
|+||.+++....+ ...-...+..|+.-...+.+.+.+++.. .++++|
T Consensus 76 DvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 76 DLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 9999999864221 2223456788999999999998887644 455543
No 367
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.70 E-value=6.4e-05 Score=65.50 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=50.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHh-hccCCCCCeEEEEccCCCH----hHHHHHh-cC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLK-ALEGADTRLRLFQIDLLDY----DAIAAAV-TG 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~----~~~~~~~-~~ 77 (323)
.+++|||+||+|.||..+++.+...|++|++++|+. +..+.+. ++ +... ..|..+. +.+.++. .+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~---~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK---EKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999998853 2223332 23 1121 2355443 2233322 26
Q ss_pred CCEEEEccc
Q 020608 78 CTGVFHLAS 86 (323)
Q Consensus 78 ~d~Vih~a~ 86 (323)
+|+||++++
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 899999986
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.70 E-value=9e-05 Score=64.85 Aligned_cols=75 Identities=11% Similarity=0.050 Sum_probs=51.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhH---HHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDA---IAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|++|++++|++. ..+.++++. .. ...|..+.+. +.+... ++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~~g---~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK---KLQMAEKLG---AA---AGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHT---CS---EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHcC---Cc---EEEecCChHHHHHHHHHhcCCCc
Confidence 4679999999999999999999999999999988642 223333331 12 1235544333 333332 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||+++|.
T Consensus 233 d~vi~~~G~ 241 (354)
T 2j8z_A 233 NLILDCIGG 241 (354)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCc
Confidence 999999974
No 369
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.70 E-value=0.00032 Score=59.89 Aligned_cols=173 Identities=16% Similarity=0.057 Sum_probs=98.4
Q ss_pred ceEEEeccccHHHHHHHHHHHHC-C--CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER-R--YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
|||.|+||+|.+|+.++..|.++ + .+++++++++ ... .....+.+.......... .+ ++..+.++++|+||
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~--G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivi 74 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP--GVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVL 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH--HHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch--hHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence 58999999999999999999875 5 4888888765 221 222222222222222110 01 01234578999999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecccccccCCCCCCCCccccCCCCCChhhhccCCCc
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSISSITPSPKWPADKVKDEDCWTDEEYCRQNEIW 161 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 161 (323)
-+||...- ....-.+.++.|+.-...+.+.+.+++.+ .++.+|.-.......- ....+.....+ +...
T Consensus 75 i~ag~~rk--pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a---~~~~k~sg~~p------~~rv 143 (312)
T 3hhp_A 75 ISAGVARK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIA---AEVLKKAGVYD------KNKL 143 (312)
T ss_dssp ECCSCSCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHH---HHHHHHTTCCC------TTSE
T ss_pred EeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHH---HHHHHHcCCCC------cceE
Confidence 99986422 22334568889999999999998877533 6666654311000000 00000000000 1133
Q ss_pred hHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCC
Q 020608 162 YPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPV 196 (323)
Q Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~ 196 (323)
.|.+-+-.-++....++..|++...++ +.|+|.+
T Consensus 144 ~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H 177 (312)
T 3hhp_A 144 FGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH 177 (312)
T ss_dssp EECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred EEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence 555533344555555666677766677 6788876
No 370
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.70 E-value=0.00015 Score=62.81 Aligned_cols=94 Identities=27% Similarity=0.289 Sum_probs=56.2
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC---EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY---TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++|+|.||||.+|+.+++.|+++++ +++.+....+... .+...+..+.+ .|+ +++ .++++|+|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~------~~~~~g~~i~~--~~~-~~~----~~~~~DvV 72 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ------RMGFAESSLRV--GDV-DSF----DFSSVGLA 72 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC------EEEETTEEEEC--EEG-GGC----CGGGCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC------ccccCCcceEE--ecC-CHH----HhcCCCEE
Confidence 46899999999999999999997764 5565542211100 00000011111 122 121 14689999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSIS 130 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 130 (323)
|-+.+. ..+..++..+.+.|+ ++|.+|+..
T Consensus 73 ~~a~g~------------------~~s~~~a~~~~~aG~-kvId~Sa~~ 102 (340)
T 2hjs_A 73 FFAAAA------------------EVSRAHAERARAAGC-SVIDLSGAL 102 (340)
T ss_dssp EECSCH------------------HHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred EEcCCc------------------HHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 998863 124456667777776 578778763
No 371
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.69 E-value=8.7e-05 Score=64.85 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=51.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhH---HHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDA---IAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|++|++++|++. ..+.++++. .. ...|..+.+. +.+... ++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~~g---a~---~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE---GQKIVLQNG---AH---EVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHTT---CS---EEEETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHcC---CC---EEEeCCCchHHHHHHHHcCCCCc
Confidence 4679999999999999999999999999999988642 223333331 12 1235554433 333333 68
Q ss_pred CEEEEccc
Q 020608 79 TGVFHLAS 86 (323)
Q Consensus 79 d~Vih~a~ 86 (323)
|+||+++|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999986
No 372
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.69 E-value=8.6e-05 Score=62.63 Aligned_cols=80 Identities=15% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++.+|+.++.+. ..+.+....+.+.+...++ +++.+.+.++|+|
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~--la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiV 198 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA--LADVINNAVGREAVVGVDA---RGIEDVIAAADGV 198 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHH--HHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHH--HHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEE
Confidence 56899999997 9999999999999998 79999887543322 1122211111222233343 3455667789999
Q ss_pred EEcccCC
Q 020608 82 FHLASPC 88 (323)
Q Consensus 82 ih~a~~~ 88 (323)
|++....
T Consensus 199 InaTp~G 205 (283)
T 3jyo_A 199 VNATPMG 205 (283)
T ss_dssp EECSSTT
T ss_pred EECCCCC
Confidence 9998653
No 373
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.69 E-value=6.4e-05 Score=62.87 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=57.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHC-CCEEEEE-ecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLER-RYTVHAT-VKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|+|+||.|+|++|.+|+.+++.+.+. ++++++. +|+.+...- .....+. +.. .++.-.++++++++++|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G-~d~gel~----g~~---~gv~v~~dl~~ll~~~DV 76 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG-QDAGAFL----GKQ---TGVALTDDIERVCAEADY 76 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT-SBTTTTT----TCC---CSCBCBCCHHHHHHHCSE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc-ccHHHHh----CCC---CCceecCCHHHHhcCCCE
Confidence 45789999999999999999999876 6787775 444321100 0000000 000 022222345666668999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
||+++.. ..+...+..|.+.|+ ++| ++|+
T Consensus 77 VIDfT~p------------------~a~~~~~~~al~~G~-~vV-igTT 105 (272)
T 4f3y_A 77 LIDFTLP------------------EGTLVHLDAALRHDV-KLV-IGTT 105 (272)
T ss_dssp EEECSCH------------------HHHHHHHHHHHHHTC-EEE-ECCC
T ss_pred EEEcCCH------------------HHHHHHHHHHHHcCC-CEE-EECC
Confidence 9998632 133456667777764 544 3444
No 374
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.66 E-value=0.00045 Score=58.21 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=67.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCc----------------HHHHHHHhhccCCC--CCeEEEEcc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSD----------------ERETAHLKALEGAD--TRLRLFQID 64 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~D 64 (323)
+.++|+|.|+ |.+|++++..|+..|. ++++++++.-. .......+.+...+ .+++.+..+
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~ 113 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN 113 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence 4579999995 9999999999999996 77777654311 11111222222223 356667778
Q ss_pred CCCHhHHHHHh-----------cCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecc
Q 020608 65 LLDYDAIAAAV-----------TGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSS 128 (323)
Q Consensus 65 l~~~~~~~~~~-----------~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 128 (323)
+++.+.+++++ +++|+||.+.- ++ ..-..+.++|.+.++ .+|+.+.
T Consensus 114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------n~--------~~R~~in~~c~~~~~-Pli~~gv 170 (292)
T 3h8v_A 114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD---------NF--------EARMTINTACNELGQ-TWMESGV 170 (292)
T ss_dssp TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------SH--------HHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CCcHHHHHHHhhhhcccccccCCCCCEEEECCc---------ch--------hhhhHHHHHHHHhCC-CEEEeee
Confidence 88766666655 58999998752 11 122335566777764 6666544
No 375
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.64 E-value=0.00061 Score=58.47 Aligned_cols=118 Identities=16% Similarity=0.152 Sum_probs=73.7
Q ss_pred CCC-CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHH--HHHHhhccCCCCCeEEEEccCCCHhHHHHHh
Q 020608 1 MSK-EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERE--TAHLKALEGADTRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (323)
|+. +++||.|+|+ |.+|+.++..|+..|. +|+++++++..... ....+..........+.. | +. +.+
T Consensus 1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al 72 (316)
T 1ldn_A 1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDC 72 (316)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGT
T ss_pred CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHh
Confidence 554 4579999998 9999999999998774 89999886421111 011111111111334332 2 22 347
Q ss_pred cCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 76 TGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 76 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
+++|+||-+++....+.. .-...+..|..-...+.+.+.+.... .++++|-
T Consensus 73 ~~aDvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 73 RDADLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp TTCSEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 899999999987543322 22446778888888888888776533 4555443
No 376
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.64 E-value=0.00016 Score=63.33 Aligned_cols=72 Identities=15% Similarity=0.130 Sum_probs=49.3
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhh-ccCCCCCeEEEEccCCCHhH---HHHHhc-CCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKA-LEGADTRLRLFQIDLLDYDA---IAAAVT-GCT 79 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~---~~~~~~-~~d 79 (323)
++|||+||+|.||..+++.+...|+ +|++++|+. +..+.+.+ +. .. ...|..+.+. +.+... ++|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~---~~~~~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH---EKCILLTSELG---FD---AAINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH---HHHHHHHHTSC---CS---EEEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH---HHHHHHHHHcC---Cc---eEEecCchHHHHHHHHhcCCCCC
Confidence 8999999999999999999999999 999998863 22222222 31 12 2245554332 222222 589
Q ss_pred EEEEccc
Q 020608 80 GVFHLAS 86 (323)
Q Consensus 80 ~Vih~a~ 86 (323)
+||+++|
T Consensus 233 ~vi~~~G 239 (357)
T 2zb4_A 233 VYFDNVG 239 (357)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999997
No 377
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.63 E-value=8.2e-05 Score=63.34 Aligned_cols=77 Identities=8% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++|+|+|+ |.+|+.++..|++.|. +|++.+|+.++.. +..+.+.... . ++.+.+++.+.+.++|+|
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~--~la~~~~~~~-~------~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAE--RLVREGDERR-S------AYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH--HHHHHSCSSS-C------CEECHHHHHHTGGGCSEE
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH--HHHHHhhhcc-C------ceeeHHHHHhhhccCCEE
Confidence 46789999997 8899999999999997 9999988643222 2222221100 0 222335677778899999
Q ss_pred EEcccCCc
Q 020608 82 FHLASPCI 89 (323)
Q Consensus 82 ih~a~~~~ 89 (323)
|++.+...
T Consensus 209 In~t~~~~ 216 (297)
T 2egg_A 209 INTTSVGM 216 (297)
T ss_dssp EECSCTTC
T ss_pred EECCCCCC
Confidence 99997643
No 378
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.62 E-value=0.00073 Score=58.11 Aligned_cols=117 Identities=11% Similarity=0.064 Sum_probs=75.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHH-HHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERE-TAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
.++||.|+|+ |.+|+.++..|+..|. +|++++++...... ...+............+..+ |.+ .++++|+
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aDi 90 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSKL 90 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCCE
Confidence 5689999997 9999999999999986 89998875321111 01111111011112222221 222 3788999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
||.+||...- ....-.+.++.|+.-...+.+.+.+++.. .++.+|.-
T Consensus 91 Vvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 91 VIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp EEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 9999986432 22234568899999999999998887633 66666643
No 379
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.61 E-value=0.00014 Score=63.10 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=58.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHH-HhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAH-LKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+|+||.|.||||++|+.+++.|.+... +++.+.+..+....... ...+. +. ....+.+.+ + +.++|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~----g~--~~~~~~~~~---~-~~~vDvV 72 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLR----GR--TNLKFVPPE---K-LEPADIL 72 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGT----TT--CCCBCBCGG---G-CCCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhc----Cc--ccccccchh---H-hcCCCEE
Confidence 468999999999999999999997764 88887664322111000 00010 00 011122322 2 4789999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
|.+++.. .+..++..+.+.|+ ++|-.|+.
T Consensus 73 ~~a~g~~------------------~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 73 VLALPHG------------------VFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp EECCCTT------------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred EEcCCcH------------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence 9998642 13445556666774 68888875
No 380
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.61 E-value=0.00016 Score=62.76 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=50.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHH-hhccCCCCCeEEEEccCCCHhHHHHH---h-cCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHL-KALEGADTRLRLFQIDLLDYDAIAAA---V-TGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~---~-~~~ 78 (323)
.+++|||+||+|.||..+++.+...|++|++++|++ +..+.+ +++. ... ..|..+.+..+.+ . .++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA---EKCRFLVEELG---FDG---AIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHTTC---CSE---EEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHcC---CCE---EEECCCHHHHHHHHHhcCCCc
Confidence 468999999999999999999999999999998864 222333 3331 111 2344443332222 2 268
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||+++|.
T Consensus 220 d~vi~~~g~ 228 (336)
T 4b7c_A 220 DVFFDNVGG 228 (336)
T ss_dssp EEEEESSCH
T ss_pred eEEEECCCc
Confidence 999999863
No 381
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.59 E-value=0.0002 Score=62.11 Aligned_cols=69 Identities=12% Similarity=-0.017 Sum_probs=56.1
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEEEc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVFHL 84 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 84 (323)
++++|.|+ |.+|+.++++|.+.|+ |++++++++.. + +.. .++.++.||.+|++.++++ ++++|.|+-+
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~---~-~~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK---K-VLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH---H-HHH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh---h-HHh-----CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 58999996 9999999999999999 99887764322 2 221 2688999999999999987 7789999876
Q ss_pred c
Q 020608 85 A 85 (323)
Q Consensus 85 a 85 (323)
.
T Consensus 185 ~ 185 (336)
T 1lnq_A 185 L 185 (336)
T ss_dssp C
T ss_pred C
Confidence 5
No 382
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.56 E-value=0.00084 Score=56.69 Aligned_cols=112 Identities=11% Similarity=0.026 Sum_probs=72.5
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHH--hh-ccCCCCCeEEE-EccCCCHhHHHHHhcCCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHL--KA-LEGADTRLRLF-QIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~~-~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d 79 (323)
|||.|+|+ |+||+.++-.|+.++. ++.+++.++... .-+.+ .+ ....+...... ..|. + .++++|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~-~G~a~DL~h~~~~~~~~~~i~~~~d~---~----~~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLA-VGEAMDLAHAAAGIDKYPKIVGGADY---S----LLKGSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHH-HHHHHHHHHHHGGGTCCCEEEEESCG---G----GGTTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcc-hhhhhhhhcccccCCCCCeEecCCCH---H----HhCCCC
Confidence 68999995 9999999999998874 898887754211 11111 11 11111122222 2332 2 367899
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
+||-+||...-+ ...-.+.++.|..-.+.+.+.+.+++.+ .++.+|.
T Consensus 72 vVvitAG~prkp--GmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 72 IIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCCS--SSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEEecCCCCCC--CCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 999999974332 2344568899999999999999888754 4555554
No 383
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.55 E-value=3.4e-05 Score=58.22 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=48.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
+++|+|+|+ |.+|+.++..|.+.|++|++.+|++.+... ..+.+ +.... .. +++.++++++|+||.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~--~a~~~-----~~~~~--~~---~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRA--FAEKY-----EYEYV--LI---NDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHH--HHHHH-----TCEEE--EC---SCHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH--HHHHh-----CCceE--ee---cCHHHHhcCCCEEEEe
Confidence 689999995 999999999999999999888886433221 12222 12211 12 2355667889999999
Q ss_pred ccC
Q 020608 85 ASP 87 (323)
Q Consensus 85 a~~ 87 (323)
.+.
T Consensus 88 t~~ 90 (144)
T 3oj0_A 88 TSS 90 (144)
T ss_dssp SCC
T ss_pred CCC
Confidence 865
No 384
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.54 E-value=0.00069 Score=59.02 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHh--cCCCE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAV--TGCTG 80 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~ 80 (323)
++|+|+||+|.||...++.+...|.+|++++++..+.+ .++++. .. .. .|..+.+ .+.++. .++|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~---~~~~~G---a~-~~--~~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA---LLKDIG---AA-HV--LNEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH---HHHHHT---CS-EE--EETTSTTHHHHHHHHHHHHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHcC---CC-EE--EECCcHHHHHHHHHHhcCCCCcE
Confidence 68999999999999999999999999999998654433 333331 11 12 2333322 233333 27999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
||++++.. .....++.++.. ++++.+++.
T Consensus 237 vid~~g~~------------------~~~~~~~~l~~~--G~iv~~G~~ 265 (349)
T 3pi7_A 237 FLDAVTGP------------------LASAIFNAMPKR--ARWIIYGRL 265 (349)
T ss_dssp EEESSCHH------------------HHHHHHHHSCTT--CEEEECCCS
T ss_pred EEECCCCh------------------hHHHHHhhhcCC--CEEEEEecc
Confidence 99998741 112344444444 488888765
No 385
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.54 E-value=0.0001 Score=64.17 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=63.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~ 78 (323)
.+++|||+|++|.||..+++.+...|++|++++|++.+ .+.++++. .. . ..|.++.+ .+.++.. ++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~~g---a~-~--~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK---LRRAKALG---AD-E--TVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHT---CS-E--EEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHhcC---CC-E--EEcCCcccHHHHHHHHhCCCCc
Confidence 46799999999999999999999999999999886422 23333331 11 1 23555433 3333332 68
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
|+||++++. .. ....++.++.. ++++.+++.
T Consensus 237 d~vi~~~g~-~~-----------------~~~~~~~l~~~--G~~v~~g~~ 267 (343)
T 2eih_A 237 DKVVDHTGA-LY-----------------FEGVIKATANG--GRIAIAGAS 267 (343)
T ss_dssp EEEEESSCS-SS-----------------HHHHHHHEEEE--EEEEESSCC
T ss_pred eEEEECCCH-HH-----------------HHHHHHhhccC--CEEEEEecC
Confidence 999999972 10 22344444443 488888765
No 386
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.53 E-value=0.00066 Score=58.23 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=69.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccC---CCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEG---ADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+||.|+|+ |.+|+.++..|+..+. ++.+++++..... .....+.+ ....+.+.. | + .++++++|+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~--g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK--GDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADL 75 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHH--HHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHH--HHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence 68999998 9999999999998876 8999987532221 11111111 112333332 2 2 234789999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
||.+++....+. ..-.+.+..|+.....+.+.+.+++.. .++.+|-
T Consensus 76 Vii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 76 VVITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 999998643221 122346788999999999998888633 5666543
No 387
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.52 E-value=0.00021 Score=64.63 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=57.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHh-hccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLK-ALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi 82 (323)
.|+|+|.|+ |-+|++|++.|.+.|++|+++.+++. ..+.+. ++ ++..+.||-++++.|+++ ++++|.+|
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~---~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGD---RLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHH---HHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH---HHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 478999996 99999999999999999999987642 222222 22 578899999999999887 56889887
Q ss_pred Ecc
Q 020608 83 HLA 85 (323)
Q Consensus 83 h~a 85 (323)
-+.
T Consensus 74 a~t 76 (461)
T 4g65_A 74 AVT 76 (461)
T ss_dssp ECC
T ss_pred EEc
Confidence 543
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.52 E-value=9.4e-05 Score=64.85 Aligned_cols=75 Identities=20% Similarity=0.210 Sum_probs=53.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+.++|+|+|+ |.+|+.++..|...|.+|++++|++.+. +.+.+... ..+.. ...+.+++.+.+.++|+||+
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~---~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL---SYLETLFG--SRVEL---LYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHG--GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH---HHHHHhhC--ceeEe---eeCCHHHHHHHHcCCCEEEE
Confidence 4589999998 9999999999999999999999865332 22222111 01211 12345567777789999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
+++.
T Consensus 237 ~~~~ 240 (361)
T 1pjc_A 237 AVLV 240 (361)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9875
No 389
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.51 E-value=0.0017 Score=55.68 Aligned_cols=116 Identities=10% Similarity=-0.025 Sum_probs=74.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHH-HHHhhccCCCCCeEE-EEccCCCHhHHHHHhcCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERET-AHLKALEGADTRLRL-FQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~d 79 (323)
.++||.|+|+ |.+|+.++..|+..|. +|++++++....... ..+............ ...|..+ ++++|
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~~daD 91 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------SAGSK 91 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------CSSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------hCCCC
Confidence 3579999998 9999999999999986 899998754221111 001111000111122 2344422 67899
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
+||-+||...-+. ..-.+.+..|+.-...+.+.+.+++.. .++.+|.-
T Consensus 92 iVIitaG~p~kpG--~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 92 LVVITAGARQQEG--ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp EEEECCSCCCCSS--CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 9999998743222 223457888999999999998777533 56666543
No 390
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.51 E-value=0.0014 Score=56.00 Aligned_cols=114 Identities=11% Similarity=0.024 Sum_probs=71.8
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHH-HHHhhc-cCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERET-AHLKAL-EGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|||.|+|+ |.+|+.++..|+..|. +|+++++++...... ..+.+. ............| + .+.++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence 58999996 9999999999999886 899998876432211 011111 0001122322112 2 2357789999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|.+||...-+. ..-.+.+..|+.-...+.+.+.+++.+ .++.+|.
T Consensus 74 ii~ag~~~kpG--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 74 IITAGLPRSPG--MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EECCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 99998642221 223467888999999999999887643 5566554
No 391
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.51 E-value=0.0003 Score=61.49 Aligned_cols=75 Identities=23% Similarity=0.252 Sum_probs=50.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHh-cCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAV-TGCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d 79 (323)
.+++|||+||+|.||..+++.+...|.+|++++|++. ..+.++++. ... . .|..+.+ .+.++. .++|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~lG---a~~-~--~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG---KCEACERLG---AKR-G--INYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHT---CSE-E--EETTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHhcC---CCE-E--EeCCchHHHHHHHHHhCCCce
Confidence 4679999999999999999999999999999988643 233333332 121 1 2333332 222222 3689
Q ss_pred EEEEcccC
Q 020608 80 GVFHLASP 87 (323)
Q Consensus 80 ~Vih~a~~ 87 (323)
+||+++|.
T Consensus 238 vvid~~g~ 245 (353)
T 4dup_A 238 IILDMIGA 245 (353)
T ss_dssp EEEESCCG
T ss_pred EEEECCCH
Confidence 99999974
No 392
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.50 E-value=0.00023 Score=62.49 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=51.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCC--HhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLD--YDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~V 81 (323)
++++|||+|+ |.||..+++.+...|.+|++++++....+..+.++++ +...+ | .+ .+.+.+.-.++|+|
T Consensus 180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~~~~~~d~v 250 (366)
T 2cdc_A 180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET-----KTNYY--N-SSNGYDKLKDSVGKFDVI 250 (366)
T ss_dssp TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH-----TCEEE--E-CTTCSHHHHHHHCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh-----CCcee--c-hHHHHHHHHHhCCCCCEE
Confidence 3889999999 9999999999998999999999875211222333333 23333 4 43 12232212579999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|++++.
T Consensus 251 id~~g~ 256 (366)
T 2cdc_A 251 IDATGA 256 (366)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999974
No 393
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.48 E-value=0.00077 Score=57.50 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=66.6
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCC---CCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGA---DTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|||.|+|+ |.+|+.++..|+..|+ +|+++++++.... .....+... .....+... +. +.++++|+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~--~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDv 70 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQ--AEAEDIAHAAPVSHGTRVWHG---GH----SELADAQV 70 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH--HHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHH--HHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCE
Confidence 58999998 9999999999999998 9999988642111 112222111 112232222 22 24788999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
||.+++....+. ..-.+.+..|+.....+++.+.+.+.. .++.+|-
T Consensus 71 VIi~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN 117 (304)
T 2v6b_A 71 VILTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN 117 (304)
T ss_dssp EEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred EEEcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999997532211 122346678888888999888776533 4555443
No 394
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.48 E-value=0.00048 Score=59.66 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH---hHHHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY---DAIAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|.+|+++++++ +..+.++++. ... . .|..+. +.+.+... ++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~~g---a~~-~--~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD---EKLKIAKEYG---AEY-L--INASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHTT---CSE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcC---CcE-E--EeCCCchHHHHHHHHhCCCCc
Confidence 467999999999999999999999999999998853 2333344332 121 2 233332 33333332 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||+++|.
T Consensus 219 D~vid~~g~ 227 (334)
T 3qwb_A 219 DASFDSVGK 227 (334)
T ss_dssp EEEEECCGG
T ss_pred eEEEECCCh
Confidence 999999974
No 395
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.47 E-value=2.3e-05 Score=66.47 Aligned_cols=80 Identities=6% Similarity=0.091 Sum_probs=50.1
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCC-CCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGAD-TRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
++++++++|||+ |.+|++++..|++.| +|++.+|+.++... ..+.+.... ... .+.+|+.+. .+.+.++|+
T Consensus 125 ~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~--l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Di 196 (287)
T 1nvt_A 125 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEA--LAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDI 196 (287)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHH--HHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCE
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHH--HHHHHhhhccccc-ceeEEEeeH---HHhhCCCCE
Confidence 356799999998 499999999999999 99999886432222 111111000 000 011233331 334567899
Q ss_pred EEEcccCCc
Q 020608 81 VFHLASPCI 89 (323)
Q Consensus 81 Vih~a~~~~ 89 (323)
||++++...
T Consensus 197 lVn~ag~~~ 205 (287)
T 1nvt_A 197 IINATPIGM 205 (287)
T ss_dssp EEECSCTTC
T ss_pred EEECCCCCC
Confidence 999998754
No 396
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.47 E-value=0.00025 Score=61.81 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHh--cC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAV--TG 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~ 77 (323)
.+++|||+|++|.||..+++.+... |++|+++++++. ..+.++++. ... ..|..+.+ .+.++. .+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~---~~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE---AVEAAKRAG---ADY---VINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH---HHHHHHHHT---CSE---EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH---HHHHHHHhC---CCE---EecCCCccHHHHHHHHhcCCC
Confidence 4679999999999999999999998 999999987642 223333331 121 22444433 344544 36
Q ss_pred CCEEEEcccC
Q 020608 78 CTGVFHLASP 87 (323)
Q Consensus 78 ~d~Vih~a~~ 87 (323)
+|+||++++.
T Consensus 241 ~d~vi~~~g~ 250 (347)
T 1jvb_A 241 VDAVIDLNNS 250 (347)
T ss_dssp EEEEEESCCC
T ss_pred ceEEEECCCC
Confidence 8999999974
No 397
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.46 E-value=0.00043 Score=60.13 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=51.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|.+|++++++..+.+.. +++. ... . .|..+.+ .+.++.. ++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---~~lg---a~~-~--~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL---LRLG---AAY-V--IDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH---HHHT---CSE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HhCC---CcE-E--EeCCcccHHHHHHHHhCCCCC
Confidence 467999999999999999999988999999999876554433 2221 121 1 2333332 2333332 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||+++|.
T Consensus 215 Dvvid~~g~ 223 (340)
T 3gms_A 215 DAAIDSIGG 223 (340)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999974
No 398
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.46 E-value=0.00024 Score=61.30 Aligned_cols=75 Identities=21% Similarity=0.258 Sum_probs=51.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~ 78 (323)
.+++|||+||+|.||..+++.+...|.+|+++++++. ..+.++++. .. .. .|..+.+ .+.+... ++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~~G---a~-~~--~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE---KAAHAKALG---AW-ET--IDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHcC---CC-EE--EeCCCccHHHHHHHHhCCCCc
Confidence 4679999999999999999999999999999988542 233333331 12 12 2333332 3333333 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||++++.
T Consensus 211 Dvvid~~g~ 219 (325)
T 3jyn_A 211 PVVYDGVGQ 219 (325)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCh
Confidence 999999974
No 399
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=97.46 E-value=7.6e-05 Score=57.18 Aligned_cols=74 Identities=18% Similarity=0.109 Sum_probs=50.5
Q ss_pred ccHHHHHHHHHHHHCCCEEEEEecCCCcHHHH-HHHhhccCCCCCeEEEEccCCCH--hHHHHHhc------CCCEEEEc
Q 020608 14 SGCIGSWLVSLLLERRYTVHATVKNLSDERET-AHLKALEGADTRLRLFQIDLLDY--DAIAAAVT------GCTGVFHL 84 (323)
Q Consensus 14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~Vih~ 84 (323)
+|.++.+.++.|++.|++|++..|+....... ...+.+...+.++..+.+|++++ ++++++++ +-|++|||
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn 104 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC 104 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46788999999999999999887765332110 01111122234577788999998 88776654 22999999
Q ss_pred ccC
Q 020608 85 ASP 87 (323)
Q Consensus 85 a~~ 87 (323)
||.
T Consensus 105 Agg 107 (157)
T 3gxh_A 105 LAN 107 (157)
T ss_dssp SBS
T ss_pred CCC
Confidence 985
No 400
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.45 E-value=0.00048 Score=59.86 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=51.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH-hHHHHHhc--CCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY-DAIAAAVT--GCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~--~~d~ 80 (323)
.+++|||+||+|.||..+++.+...|.+|++++++..+.+ .++++. .. ..+..+ .+. +.+.++.. ++|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~---~~~~~g---a~-~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE---FVKSVG---AD-IVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH---HHHHHT---CS-EEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHhcC---Cc-EEecCc-hhHHHHHHHHhCCCCceE
Confidence 4679999999999999999999999999999998654433 333331 11 223333 232 23334333 5899
Q ss_pred EEEcccC
Q 020608 81 VFHLASP 87 (323)
Q Consensus 81 Vih~a~~ 87 (323)
||+++|.
T Consensus 231 vid~~g~ 237 (342)
T 4eye_A 231 VVDPIGG 237 (342)
T ss_dssp EEESCC-
T ss_pred EEECCch
Confidence 9999974
No 401
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=97.44 E-value=0.00044 Score=61.00 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=54.7
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+.+|+|+|+|+ |.+|+.+++.+.+.|++|++++..+..... ++ --.++..|..|.+.+.++.+.+|+|.
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-----~~-----ad~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-----YV-----AHEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-----GG-----SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-----hh-----CCEEEECCCCCHHHHHHHHHhCCcce
Confidence 45789999995 899999999999999999999876532211 11 12456799999999999998899874
Q ss_pred E
Q 020608 83 H 83 (323)
Q Consensus 83 h 83 (323)
-
T Consensus 79 ~ 79 (377)
T 3orq_A 79 Y 79 (377)
T ss_dssp E
T ss_pred e
Confidence 3
No 402
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.44 E-value=9.6e-05 Score=64.57 Aligned_cols=83 Identities=17% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|++++|+|.|.|+ |.+|+.++..|++.|++|++.+|++...+............+++. +...+.-..+++++++++|+
T Consensus 25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~-l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYP-FPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCC-CCTTEEEESCHHHHHTTCCE
T ss_pred ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCc-cCCCeEEECCHHHHHhcCCE
Confidence 4555789999995 999999999999999999999986432222111100000011111 11111111245667788999
Q ss_pred EEEcc
Q 020608 81 VFHLA 85 (323)
Q Consensus 81 Vih~a 85 (323)
||-+.
T Consensus 103 VilaV 107 (356)
T 3k96_A 103 ILIVV 107 (356)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98765
No 403
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.43 E-value=0.00065 Score=56.22 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=64.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCc-----------------HHHHHHHhhccCCCC--CeEEEEc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSD-----------------ERETAHLKALEGADT--RLRLFQI 63 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~~~~~~~~~~~~--~~~~~~~ 63 (323)
+.++|+|.|+ |.+|+++++.|+..|. ++++++++.-. .......+.+...++ +++.+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4679999997 7799999999999997 67777543210 111112222222223 3455555
Q ss_pred cCCCHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 64 DLLDYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 64 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
+++ .+.+.++++++|+||.+... . ..-..+.++|.+.++ .+|..+..
T Consensus 106 ~~~-~~~~~~~~~~~DvVi~~~d~---------~--------~~r~~l~~~~~~~~~-p~i~~~~~ 152 (251)
T 1zud_1 106 RLT-GEALKDAVARADVVLDCTDN---------M--------ATRQEINAACVALNT-PLITASAV 152 (251)
T ss_dssp CCC-HHHHHHHHHHCSEEEECCSS---------H--------HHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred cCC-HHHHHHHHhcCCEEEECCCC---------H--------HHHHHHHHHHHHhCC-CEEEEecc
Confidence 554 35677788899999988521 1 122345556777764 57776554
No 404
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=97.43 E-value=0.00035 Score=62.54 Aligned_cols=69 Identities=19% Similarity=0.176 Sum_probs=54.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++..... . + --..+..|..|.+.+.++.+++|+|+
T Consensus 33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~-~----~-----ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG-A----V-----ADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH-H----H-----SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh-h----h-----CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 45789999996 899999999999999999998765433221 1 1 11356789999999999999999987
No 405
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.42 E-value=0.00023 Score=60.70 Aligned_cols=74 Identities=19% Similarity=0.111 Sum_probs=51.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+++|||+|++|.+|..+++.+...|.+|+++++++.+.+ .++++. .. . ..|..+.+++.+.+.++|+||+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~---~~~~~g---a~-~--~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA---LPLALG---AE-E--AATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH---HHHHTT---CS-E--EEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHhcC---CC-E--EEECCcchhHHHHhcCceEEEE
Confidence 4679999999999999999999999999999998654332 222321 11 1 2344441334444478999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
++.
T Consensus 196 -~g~ 198 (302)
T 1iz0_A 196 -VRG 198 (302)
T ss_dssp -CSC
T ss_pred -CCH
Confidence 863
No 406
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.42 E-value=0.00033 Score=61.73 Aligned_cols=76 Identities=20% Similarity=0.074 Sum_probs=54.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+.+++|+|+|+ |.||+.+++.+...|.+|++++|++.+ .+.+++.. +..+ ..+..+.+++.+++.++|+||
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~---l~~~~~~~--g~~~---~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDK---LRQLDAEF--CGRI---HTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHT--TTSS---EEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH---HHHHHHhc--CCee---EeccCCHHHHHHHHcCCCEEE
Confidence 46789999998 999999999999999999999886422 22222210 1122 123345667788888999999
Q ss_pred EcccC
Q 020608 83 HLASP 87 (323)
Q Consensus 83 h~a~~ 87 (323)
.+++.
T Consensus 237 ~~~~~ 241 (377)
T 2vhw_A 237 GAVLV 241 (377)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 98864
No 407
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.39 E-value=0.0032 Score=54.24 Aligned_cols=114 Identities=15% Similarity=0.091 Sum_probs=70.9
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHH-HHHhh-cc--CCCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERET-AHLKA-LE--GADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
++||.|+|| |.+|+.++..|+..|+ +|++.+++....+.. ..+.. .. ....++.. ..| + +.++++|
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~~aD 84 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-EYLQNSD 84 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-HHHCCCC
Confidence 368999998 9999999999999998 999998876543321 11111 11 01112221 133 2 3478899
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
+||-+++...-+.. .-......|+.-...+.+...+...+ .++++|..
T Consensus 85 ~VI~avg~p~k~g~--tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 133 (328)
T 2hjr_A 85 VVIITAGVPRKPNM--TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNP 133 (328)
T ss_dssp EEEECCSCCCCTTC--CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEEEcCCCCCCCCC--chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99999975322111 11235667888888888887765433 44555443
No 408
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.38 E-value=0.0019 Score=55.45 Aligned_cols=117 Identities=12% Similarity=0.055 Sum_probs=71.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHH-HHHhhc-c--CCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERET-AHLKAL-E--GADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~--~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
.++||.|+|+ |.+|+.++..|+..|+ +|+++++++...+.. ..+... . ....++.. ..| + +.++++
T Consensus 3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~~a 73 (322)
T 1t2d_A 3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNT------Y-DDLAGA 73 (322)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECC------G-GGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHhCCC
Confidence 4679999998 9999999999999998 988888876433221 111111 0 01112221 133 2 347899
Q ss_pred CEEEEcccCCccCCCC---CchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 79 TGVFHLASPCIVDKVE---DPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
|+||-+++...-+... ..-......|+.-.+.+.+.+.+...+ .++++|..
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 128 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNP 128 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 9999999753221110 002345677888888888887766533 55555443
No 409
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.38 E-value=0.00044 Score=55.88 Aligned_cols=66 Identities=24% Similarity=0.200 Sum_probs=46.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++|+|.|+| +|.+|+.+++.|++.|++|++.+|++. ..+.+ ... ++... ++.++++++|+||.
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~---~~~~~---~~~--g~~~~--------~~~~~~~~~DvVi~ 89 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPK---RTARL---FPS--AAQVT--------FQEEAVSSPEVIFV 89 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHH---HHHHH---SBT--TSEEE--------EHHHHTTSCSEEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHH---HHc--CCcee--------cHHHHHhCCCEEEE
Confidence 457899999 799999999999999999999988642 22222 111 33321 24566788999998
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+..
T Consensus 90 av~ 92 (215)
T 2vns_A 90 AVF 92 (215)
T ss_dssp CSC
T ss_pred CCC
Confidence 874
No 410
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.38 E-value=0.0013 Score=56.61 Aligned_cols=102 Identities=18% Similarity=0.150 Sum_probs=59.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCC---CcHHHH-HHHhhccCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNL---SDERET-AHLKALEGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
.|++|.|.||||++|+.|++.|.+. .+++..+..+. +..... +....+... .+..+... .+.+ ++++++
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~-~~~~v~~~--~~~~---~~~~~~ 76 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGI-VELPLQPM--SDIS---EFSPGV 76 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTT-CCCBEEEE--SSGG---GTCTTC
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCc-cceeEecc--CCHH---HHhcCC
Confidence 4689999999999999999999985 56888775543 211111 111111110 02222221 0222 223689
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSIS 130 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 130 (323)
|+||-|.+. ..+..++..+.+.|+ ++|=.|+..
T Consensus 77 Dvvf~a~p~------------------~~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAH------------------EVSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp SEEEECSCH------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CEEEECCCh------------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence 999988753 123445555566664 788888863
No 411
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.35 E-value=0.0004 Score=60.62 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=59.1
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHH-hhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHL-KALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++|.|.||+|++|+.+++.|.+... +++++.+..+........ ..+.. .+ ..|+.-.+ ++.++++|+||
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~---~v---~~dl~~~~--~~~~~~vDvVf 87 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRA---QK---LPTLVSVK--DADFSTVDAVF 87 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTT---SC---CCCCBCGG--GCCGGGCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcC---cc---cccceecc--hhHhcCCCEEE
Confidence 46899999999999999999998764 888887643222111111 11111 10 13433222 33456899999
Q ss_pred EcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccc
Q 020608 83 HLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSIS 130 (323)
Q Consensus 83 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 130 (323)
-|++... +...+..+ +.|+ ++|-.|+..
T Consensus 88 ~atp~~~------------------s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGT------------------TQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp ECCCTTT------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred EcCCchh------------------HHHHHHHH-hCCC-EEEECCccc
Confidence 9986420 23345555 5564 688888753
No 412
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.35 E-value=0.00046 Score=60.15 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhc--C
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVT--G 77 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~ 77 (323)
.+.+|||+|+ |.||..+++.+...|+ +|++++|++ +..+.++++. ... ..|..+.+ .+.++.. +
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~---~~~~~~~~~G-----a~~-~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD---FRRELAKKVG-----ADY-VINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH---HHHHHHHHHT-----CSE-EECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH---HHHHHHHHhC-----CCE-EECCCCcCHHHHHHHHcCCCC
Confidence 4678999999 9999999999999999 999998863 2223333331 111 12443322 2333332 6
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
+|+||++++.. ......++.++.. ++++.+++.
T Consensus 237 ~D~vid~~g~~-----------------~~~~~~~~~l~~~--G~iv~~g~~ 269 (348)
T 2d8a_A 237 VDVFLEFSGAP-----------------KALEQGLQAVTPA--GRVSLLGLY 269 (348)
T ss_dssp EEEEEECSCCH-----------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred CCEEEECCCCH-----------------HHHHHHHHHHhcC--CEEEEEccC
Confidence 89999998741 1223344444443 488888765
No 413
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.33 E-value=0.0016 Score=56.04 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=72.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccC---CCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEG---ADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
+.+||.|+|+ |.+|+.++..|+..+. ++.+++++..... .....+.+ ....+.+.. | + .++++++
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~--g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~a 77 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTK--GDAIDLSNALPFTSPKKIYS-A--E----YSDAKDA 77 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHH--HHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhH--HHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCC
Confidence 4579999998 9999999999998875 8999887532221 11222211 112333332 2 2 2347789
Q ss_pred CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 79 TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 79 d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|+||.+++....+ ...-...+..|+.....+.+.+.+++.. .++.+|-
T Consensus 78 DvVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 78 DLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9999999864221 1223456778999999999998777633 6666544
No 414
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.33 E-value=0.0028 Score=54.34 Aligned_cols=117 Identities=19% Similarity=0.099 Sum_probs=71.2
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHH-HHhhc---cCCCCCeEEEEccCCCHhHHHHHh
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETA-HLKAL---EGADTRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (323)
|+ ++++|.|+|+ |.+|+.++..|++.|+ +|+++++++....... .+... .....++.. ..| + +.+
T Consensus 1 M~-~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~a~ 70 (317)
T 2ewd_A 1 MI-ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDD------Y-ADI 70 (317)
T ss_dssp CC-CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGG
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHh
Confidence 55 4578999997 9999999999999998 9999988764433210 11110 000112221 122 2 346
Q ss_pred cCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 76 TGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 76 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
+++|+||-+++...-+.. .-.+.+..|......+++...+.... .++.+|..
T Consensus 71 ~~aDiVi~avg~p~~~g~--~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 71 SGSDVVIITASIPGRPKD--DRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp TTCSEEEECCCCSSCCSS--CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred CCCCEEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 789999999975432221 12234556777777777777655423 55556654
No 415
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.33 E-value=0.00015 Score=60.97 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=48.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+++|+++|+|+ |.+|++++..|++.|.+|++.+|+.++.... .+.+.... .+.. .|+ +++.+ .++|+||
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l--~~~~~~~~-~~~~--~~~---~~~~~--~~~DivI 185 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKEL--AERFQPYG-NIQA--VSM---DSIPL--QTYDLVI 185 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHH--HHHHGGGS-CEEE--EEG---GGCCC--SCCSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--HHHccccC-CeEE--eeH---HHhcc--CCCCEEE
Confidence 46789999997 8899999999999999999999975332221 12221111 2222 232 11110 3789999
Q ss_pred EcccCC
Q 020608 83 HLASPC 88 (323)
Q Consensus 83 h~a~~~ 88 (323)
++++..
T Consensus 186 n~t~~~ 191 (272)
T 1p77_A 186 NATSAG 191 (272)
T ss_dssp ECCCC-
T ss_pred ECCCCC
Confidence 999864
No 416
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.31 E-value=0.0006 Score=59.15 Aligned_cols=97 Identities=16% Similarity=0.080 Sum_probs=61.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhcCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~d~ 80 (323)
.+++|||+|+ |.||..+++.+...|.+|++++|++. ..+.++++. .. ...|..+.+ .+.++..++|+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~lG-----a~-~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE---KLELAKELG-----AD-LVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHTT-----CS-EEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHCC-----CC-EEecCCCccHHHHHHHHhCCCCE
Confidence 4679999999 77999999999999999999987642 223333331 11 123554432 23333357999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
||++++.. ......++.++.. ++++.+++.
T Consensus 234 vid~~g~~-----------------~~~~~~~~~l~~~--G~~v~~g~~ 263 (339)
T 1rjw_A 234 AVVTAVSK-----------------PAFQSAYNSIRRG--GACVLVGLP 263 (339)
T ss_dssp EEESSCCH-----------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred EEECCCCH-----------------HHHHHHHHHhhcC--CEEEEeccc
Confidence 99998741 1223344444443 488887764
No 417
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=97.30 E-value=0.00057 Score=57.98 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=31.0
Q ss_pred CCce-EEEecc-c-----------------cHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 4 EAEV-VCVTGG-S-----------------GCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 4 ~~~~-vlItGa-t-----------------G~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
.+++ ||||+| | |-.|.+++++++++|++|+.+.|..
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 5677 999854 5 8899999999999999999998854
No 418
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.29 E-value=0.002 Score=55.02 Aligned_cols=113 Identities=17% Similarity=0.131 Sum_probs=68.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHH-HHh-hccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETA-HLK-ALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
||+|.|+| +|.+|+.++..|++.| ++|++++|++....... .+. ........+.....| . +.++++|+
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDv 72 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADV 72 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCE
Confidence 47999999 6999999999999999 79999988643222211 111 111111123332233 2 34678999
Q ss_pred EEEcccCCcc----CCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEec
Q 020608 81 VFHLASPCIV----DKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTS 127 (323)
Q Consensus 81 Vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 127 (323)
||-+++.... +. ..-...+..|+.-...+++.+.+...+ .++.+|
T Consensus 73 Viiav~~~~~~~~~~g--~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPT--GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp EEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEecCCcccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 9999875331 11 112235667888888888887776533 444443
No 419
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.28 E-value=0.0002 Score=61.37 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=30.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
+||+|.|.|+ |.+|+.++..|++.|++|++++|++
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4679999995 9999999999999999999998864
No 420
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00014 Score=59.09 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=32.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEE-EecCCCc
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHA-TVKNLSD 41 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~ 41 (323)
|+||+|.|+| +|.+|+.++..|++.|++|++ .+|++..
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~ 59 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPAS 59 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGG
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHH
Confidence 4578999999 799999999999999999998 7776543
No 421
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.27 E-value=0.0025 Score=57.44 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=31.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKN 38 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (323)
.+++|||+||+|.||..+++.+...|.+|+++.++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~ 254 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS 254 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46799999999999999999999999999998874
No 422
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.27 E-value=0.0037 Score=53.57 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=65.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHH--HHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDER--ETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (323)
++|+|.|+|+ |.+|+.++..|++.|+ +|++++|++.... .......+.. .....+... ++.+ .++++|
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~--~~~~----~~~~aD 77 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-YPTVSIDGS--DDPE----ICRDAD 77 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-STTCEEEEE--SCGG----GGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhh-cCCeEEEeC--CCHH----HhCCCC
Confidence 4579999997 9999999999999998 9999988642221 1111111111 012222222 1222 367899
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCC
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALG 119 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (323)
+||-+++....+ ...-...+..|+.....+++...+.+
T Consensus 78 ~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~ 115 (319)
T 1lld_A 78 MVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVA 115 (319)
T ss_dssp EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999998653221 12334567778888888888876654
No 423
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.25 E-value=0.0039 Score=53.25 Aligned_cols=114 Identities=15% Similarity=-0.006 Sum_probs=70.2
Q ss_pred ceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHH-Hhh-ccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAH-LKA-LEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|||.|+|+ |.+|+.++..|++. |++|+++++++...+.... +.. .........+... +|. ++ ++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV 73 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence 58999998 99999999999985 7999999998654332211 111 0000011121110 222 23 6789999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|-+++.... ........+..|+.-...+.+.+.+.+.+ .++.+|.
T Consensus 74 iiav~~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 74 IITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp EECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred EEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 999974221 11123456778888888898888776533 5555543
No 424
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.24 E-value=0.003 Score=53.91 Aligned_cols=111 Identities=17% Similarity=0.156 Sum_probs=72.4
Q ss_pred ceEEEeccccHHHHHHHHHHHHCC--CEEEEEecCCCcHHHHHHHhhccCC---CCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERR--YTVHATVKNLSDERETAHLKALEGA---DTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
|||.|+|+ |.+|+.++..|+..+ .++++++++....+ .....+.+. .....+.. + +. ++++++|+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~--g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQ--AHAEDILHATPFAHPVWVWA-G--SY----GDLEGARA 70 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH--HHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH--HHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCCCE
Confidence 58999998 999999999999887 58999987632221 112222211 12333332 2 22 24789999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
||.+++....+. ..-...+..|+.-...+.+.+.+++.. .++.+|-
T Consensus 71 Vii~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 71 VVLAAGVAQRPG--ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp EEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEECCCCCCCCC--cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 999998643221 223456788999999999998877633 5666543
No 425
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.23 E-value=0.0016 Score=57.68 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=53.5
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
+.+|+|+|+|+ |.+|+.+++.+.+.|++|++++.++..... ++ --..+..|..|.+.+.++++.+|+|.
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~-----~~-----ad~~~~~~~~d~~~l~~~~~~~dvI~ 80 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA-----QV-----ADIEIVASYDDLKAIQHLAEISDVVT 80 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT-----TT-----CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH-----Hh-----CCceEecCcCCHHHHHHHHHhCCEee
Confidence 46789999995 889999999999999999999765432211 11 11345689999999999999999874
No 426
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=97.22 E-value=9.1e-05 Score=68.25 Aligned_cols=73 Identities=16% Similarity=0.085 Sum_probs=44.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHH-HhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAA-AVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~V 81 (323)
+++++++|||| |.+|++++..|++.|++|+++.|+..+.. +..+.+. ..+. ++.+ +.+ ....+|+|
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~--~la~~~~---~~~~----~~~d---l~~~~~~~~Dil 428 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERAL--ELAEAIG---GKAL----SLTD---LDNYHPEDGMVL 428 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHH--HHHHHTT---C-CE----ETTT---TTTC--CCSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHcC---Ccee----eHHH---hhhccccCceEE
Confidence 35678999999 79999999999999999999988643222 2222221 1111 1222 111 12358999
Q ss_pred EEcccCC
Q 020608 82 FHLASPC 88 (323)
Q Consensus 82 ih~a~~~ 88 (323)
||+++..
T Consensus 429 VN~agvg 435 (523)
T 2o7s_A 429 ANTTSMG 435 (523)
T ss_dssp EECSSTT
T ss_pred EECCCCC
Confidence 9999864
No 427
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.21 E-value=0.0012 Score=57.56 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=29.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC-CEEEEEecC
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR-YTVHATVKN 38 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 38 (323)
+++|.|.||||++|+.+++.|++.+ .+|+++.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 4699999999999999999998765 588888764
No 428
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.21 E-value=0.00056 Score=59.96 Aligned_cols=97 Identities=21% Similarity=0.210 Sum_probs=61.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHh-cCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAV-TGCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d 79 (323)
.+++|||+||+|.||..+++.+...|++|+++++++ +..+.++++. .. ..+ |..+.+ .+.+.. .++|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~---~~~~~~~~~G---a~-~~~--~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD---EKSAFLKSLG---CD-RPI--NYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHTT---CS-EEE--ETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH---HHHHHHHHcC---Cc-EEE--ecCChhHHHHHHHhcCCCCC
Confidence 467999999999999999999999999999998853 2223333331 12 122 333322 222222 2689
Q ss_pred EEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 80 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 80 ~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
+||++++. . .....++.++.. ++++.+++.
T Consensus 234 ~vid~~g~----------~--------~~~~~~~~l~~~--G~iv~~g~~ 263 (362)
T 2c0c_A 234 VVYESVGG----------A--------MFDLAVDALATK--GRLIVIGFI 263 (362)
T ss_dssp EEEECSCT----------H--------HHHHHHHHEEEE--EEEEECCCG
T ss_pred EEEECCCH----------H--------HHHHHHHHHhcC--CEEEEEeCC
Confidence 99999863 0 122344555544 489988876
No 429
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.21 E-value=0.00028 Score=59.23 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=50.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++..|+.++.. .+.. ++.. ...+++.+++.++|+|
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~------~la~---~~~~-----~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN------NWSL---NINK-----INLSHAESHLDEFDII 179 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT------TCCS---CCEE-----ECHHHHHHTGGGCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH------HHHH---hccc-----ccHhhHHHHhcCCCEE
Confidence 35789999996 8999999999999998 8999988753322 1111 1221 1345677778889999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|++...
T Consensus 180 InaTp~ 185 (277)
T 3don_A 180 INTTPA 185 (277)
T ss_dssp EECCC-
T ss_pred EECccC
Confidence 999754
No 430
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.21 E-value=0.00035 Score=57.37 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=28.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEE-ecC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHAT-VKN 38 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~ 38 (323)
+|+||.|+|+ |.+|+.+++.+.+++.++++. +|+
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~ 36 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT 36 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence 5789999999 999999999999987777664 444
No 431
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.18 E-value=0.00055 Score=57.81 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=32.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS 40 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (323)
++++|.|.|+ |.+|+.++..|++.|++|++.+|++.
T Consensus 3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5689999985 99999999999999999999988753
No 432
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.18 E-value=0.0019 Score=53.06 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=46.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHC-CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc-----CCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLER-RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT-----GCT 79 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d 79 (323)
+||.|+|++|-+|+.+++.+.+. ++++++..+..++... .+.. ..+ +..|++.++...+.+. +++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~--~~~~----~~D---vvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSL--LTDG----NTE---VVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHH--HHHT----TCC---EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHH--Hhcc----CCc---EEEEccChHHHHHHHHHHHHcCCC
Confidence 48999999999999999999876 8999877654332221 1110 111 4566666655443322 567
Q ss_pred EEEEccc
Q 020608 80 GVFHLAS 86 (323)
Q Consensus 80 ~Vih~a~ 86 (323)
+|+-+.|
T Consensus 72 ~VigTTG 78 (245)
T 1p9l_A 72 AVVGTTG 78 (245)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 7765554
No 433
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.17 E-value=0.0006 Score=58.94 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=58.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC---CEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR---YTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+|++|.|.||||++|+.+++.|.+++ .+++.+....+... .+...+..+.+...| ++ .++++|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~------~~~~~~~~i~~~~~~---~~----~~~~vDv 68 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK------TYRFNGKTVRVQNVE---EF----DWSQVHI 68 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC------EEEETTEEEEEEEGG---GC----CGGGCSE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC------ceeecCceeEEecCC---hH----HhcCCCE
Confidence 46899999999999999999999873 47777763221100 010001122222222 11 2458999
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSIS 130 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 130 (323)
||-|.+.. .+...+..+.+.|+ ++|-.|+..
T Consensus 69 Vf~a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 69 ALFSAGGE------------------LSAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp EEECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EEECCCch------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence 99887631 24455666667775 778778763
No 434
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=97.16 E-value=0.00069 Score=58.89 Aligned_cols=73 Identities=21% Similarity=0.272 Sum_probs=49.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH-hHHHHHhc--CCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY-DAIAAAVT--GCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~--~~d~ 80 (323)
.+.+|||+||+|.||..+++.+...|.+|+++ +++ +..+.++++ +...+. +-.+. +.+.+... ++|+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~---~~~~~~~~l-----Ga~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG---SDLEYVRDL-----GATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH---HHHHHHHHH-----TSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH---HHHHHHHHc-----CCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 46799999999999999999999999999988 543 233444443 223222 22222 22333333 6899
Q ss_pred EEEccc
Q 020608 81 VFHLAS 86 (323)
Q Consensus 81 Vih~a~ 86 (323)
||++++
T Consensus 220 vid~~g 225 (343)
T 3gaz_A 220 VYDTLG 225 (343)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999986
No 435
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.15 E-value=0.0011 Score=58.12 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=54.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+.+|||+|+ |.||..+++.+...|.+|+++++++.+.+. ..+++. .. . ..|..+.+.+.++..++|+||+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~--~~~~lG---a~-~--v~~~~~~~~~~~~~~~~D~vid 257 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE--ALKNFG---AD-S--FLVSRDQEQMQAAAGTLDGIID 257 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH--HHHTSC---CS-E--EEETTCHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHhcC---Cc-e--EEeccCHHHHHHhhCCCCEEEE
Confidence 5679999996 999999999999999999999886533221 111331 11 1 2355666667776678999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
+++.
T Consensus 258 ~~g~ 261 (366)
T 1yqd_A 258 TVSA 261 (366)
T ss_dssp CCSS
T ss_pred CCCc
Confidence 9975
No 436
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.15 E-value=0.0051 Score=53.55 Aligned_cols=76 Identities=17% Similarity=0.051 Sum_probs=49.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEcc--CCCHhHHHHHh-----c
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQID--LLDYDAIAAAV-----T 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~~~~~~~~~~-----~ 76 (323)
.+.+|||+|+ |.+|...++.+...|.+|+++++++ +..+.++++. .. ..+..+ -...+.+.+.. .
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~---~~~~~~~~lG---a~-~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSP---RRLEVAKNCG---AD-VTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHTT---CS-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCH---HHHHHHHHhC---CC-EEEcCcccccHHHHHHHHhccccCC
Confidence 4679999997 9999999998888999998887753 2333333332 12 222211 12234455444 3
Q ss_pred CCCEEEEcccC
Q 020608 77 GCTGVFHLASP 87 (323)
Q Consensus 77 ~~d~Vih~a~~ 87 (323)
++|+||++++.
T Consensus 240 g~D~vid~~g~ 250 (352)
T 1e3j_A 240 LPNVTIDCSGN 250 (352)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 437
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.14 E-value=0.00046 Score=58.34 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=47.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+||+|.|+|+||.+|+.++..|++.|++|++.+|++.. .+.+... ++ +..+ ..++++++|+||-
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~---~~~~~~~-----g~-----~~~~---~~~~~~~aDvVi~ 73 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEG---RDRLQGM-----GI-----PLTD---GDGWIDEADVVVL 73 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHH---HHHHHHT-----TC-----CCCC---SSGGGGTCSEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHH---HHHHHhc-----CC-----CcCC---HHHHhcCCCEEEE
Confidence 45799999999999999999999999999998876422 2222221 11 1122 2335678999998
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+..
T Consensus 74 av~ 76 (286)
T 3c24_A 74 ALP 76 (286)
T ss_dssp CSC
T ss_pred cCC
Confidence 863
No 438
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.14 E-value=0.00028 Score=63.63 Aligned_cols=78 Identities=17% Similarity=0.093 Sum_probs=48.3
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhcc--CCCCCeE-EE-----EccCCCHhHHHHHhcC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALE--GADTRLR-LF-----QIDLLDYDAIAAAVTG 77 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~-~~-----~~Dl~~~~~~~~~~~~ 77 (323)
|+|.|.| +|++|..++..|++.|++|++++|++...+ .+.+-. ...++.. .+ .+.++-..++++++++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~---~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~ 78 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIE---QLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE 78 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH---HHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHH---HHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc
Confidence 6899998 599999999999999999999988643222 222210 0000000 00 0111111235666788
Q ss_pred CCEEEEcccC
Q 020608 78 CTGVFHLASP 87 (323)
Q Consensus 78 ~d~Vih~a~~ 87 (323)
+|+||-+.+.
T Consensus 79 aDvViiaVpt 88 (450)
T 3gg2_A 79 ADIIFIAVGT 88 (450)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEEcCC
Confidence 9999988754
No 439
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.13 E-value=0.0015 Score=55.57 Aligned_cols=72 Identities=15% Similarity=0.154 Sum_probs=52.4
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+++|+|.|+ |-||+.+++.|...|.+|++.+|++.+ .+.+... +++.+ +.++++++++++|+|
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~---~~~~~~~-----g~~~~-----~~~~l~~~l~~aDvV 219 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH---LARITEM-----GLVPF-----HTDELKEHVKDIDIC 219 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHT-----TCEEE-----EGGGHHHHSTTCSEE
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHC-----CCeEE-----chhhHHHHhhCCCEE
Confidence 357899999995 999999999999999999999886422 1222221 23322 124577788999999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
+.+...
T Consensus 220 i~~~p~ 225 (300)
T 2rir_A 220 INTIPS 225 (300)
T ss_dssp EECCSS
T ss_pred EECCCh
Confidence 998864
No 440
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.13 E-value=0.001 Score=56.65 Aligned_cols=36 Identities=17% Similarity=0.362 Sum_probs=32.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
++++|.|+||+|.||+.++..|.+.|++|++.+|++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 356899999999999999999999999999998764
No 441
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.09 E-value=0.0015 Score=54.73 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC-CCEEEEEe-cCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER-RYTVHATV-KNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.||.|.|++|-+|+.+++.+.+. +.++++.. |+.+...- .....+. ++. ..++.-.+++++++.++|+|
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G-~d~gel~----G~~--~~gv~v~~dl~~ll~~aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD-KDASILI----GSD--FLGVRITDDPESAFSNTEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT-SBGGGGT----TCS--CCSCBCBSCHHHHTTSCSEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-cchHHhh----ccC--cCCceeeCCHHHHhcCCCEE
Confidence 3468999999999999999999865 67877764 43221000 0000000 000 11222223566777889999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEE
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVV 125 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 125 (323)
|.+..+ ..+...+..|.+.|+ .+|.
T Consensus 93 IDFT~p------------------~a~~~~~~~~l~~Gv-~vVi 117 (288)
T 3ijp_A 93 LDFSQP------------------QASVLYANYAAQKSL-IHII 117 (288)
T ss_dssp EECSCH------------------HHHHHHHHHHHHHTC-EEEE
T ss_pred EEcCCH------------------HHHHHHHHHHHHcCC-CEEE
Confidence 988632 123445666777764 5553
No 442
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.09 E-value=0.00099 Score=56.32 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=45.6
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEcc
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 85 (323)
|+|.|.| +|.+|+.++..|++.|++|++.+|++...+... +. ++.. .++++++++++|+||-+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~---~~-----g~~~-------~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA---AL-----GAER-------AATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH---HT-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH---HC-----CCee-------cCCHHHHHhcCCEEEEEc
Confidence 6899999 599999999999999999999988764433221 11 2221 123455666789888776
No 443
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.09 E-value=0.0077 Score=52.45 Aligned_cols=177 Identities=13% Similarity=0.031 Sum_probs=96.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--E---EEEEecCCCcH-H-HHHHHhhccCCC-CCeEEEEccCCCHhHHHHHh
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--T---VHATVKNLSDE-R-ETAHLKALEGAD-TRLRLFQIDLLDYDAIAAAV 75 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~---V~~~~r~~~~~-~-~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~ 75 (323)
..+||.|+||+|.||++++-.|+..+. + +.+...+.+.. . .......+.+.. +-..-+. +.. ...+.+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~ 106 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVF 106 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHh
Confidence 356899999999999999999998763 2 65544433221 1 111222232211 1111111 111 124568
Q ss_pred cCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhC-C-cCEEEEecccccccCCCCCCCCccccCCCCCChh
Q 020608 76 TGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKAL-G-VKRVVVTSSISSITPSPKWPADKVKDEDCWTDEE 153 (323)
Q Consensus 76 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~e~~~~~~~ 153 (323)
+++|+||-+||...- ....-.+.++.|+.-.+.+.....++ + -..++.+|.-.-.... ...+....+.+
T Consensus 107 ~daDvVVitag~prk--pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~------ia~k~sg~~~~- 177 (375)
T 7mdh_A 107 EDVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNAL------ICLKNAPDIPA- 177 (375)
T ss_dssp TTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH------HHHHTCTTSCG-
T ss_pred CCCCEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHH------HHHHHcCCCCc-
Confidence 899999999986322 22334568899999999999998764 3 2367776653111000 00000000000
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHhCCccEEEEcCCCccCCCCC
Q 020608 154 YCRQNEIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPVIP 198 (323)
Q Consensus 154 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~Rp~~v~G~~~~ 198 (323)
...-+-+-+-.-++-...+++.|++...++-..|+|.+..
T Consensus 178 -----rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd 217 (375)
T 7mdh_A 178 -----KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 217 (375)
T ss_dssp -----GGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST
T ss_pred -----cEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC
Confidence 0112334444455555556677776666654467787643
No 444
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.08 E-value=0.0028 Score=53.02 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=49.2
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++..|+.++.. +..+.+.. ..+... ++.+ +.. .++|+|
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~--~la~~~~~--~~~~~~--~~~~---l~~--~~~Div 185 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKAL--ALRNELDH--SRLRIS--RYEA---LEG--QSFDIV 185 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHH--HHHHHHCC--TTEEEE--CSGG---GTT--CCCSEE
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH--HHHHHhcc--CCeeEe--eHHH---hcc--cCCCEE
Confidence 46899999997 8999999999999995 9999988753322 22222221 123333 2222 211 578999
Q ss_pred EEcccCC
Q 020608 82 FHLASPC 88 (323)
Q Consensus 82 ih~a~~~ 88 (323)
|++....
T Consensus 186 InaTp~g 192 (272)
T 3pwz_A 186 VNATSAS 192 (272)
T ss_dssp EECSSGG
T ss_pred EECCCCC
Confidence 9997653
No 445
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.07 E-value=0.001 Score=58.00 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=55.0
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC---EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY---TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++|.|.||||++|..|++.|.++++ ++..+.-.. .... .+...+.+..+...|. + .++++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-saG~-----~~~~~~~~~~~~~~~~---~----~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-SAGK-----SLKFKDQDITIEETTE---T----AFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-TTTC-----EEEETTEEEEEEECCT---T----TTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-cCCC-----cceecCCCceEeeCCH---H----HhcCCCEE
Confidence 47999999999999999999988765 444443221 1110 0000011122222221 1 25689999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSIS 130 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 130 (323)
|-|++. ..+...+..+.+.|+ ++|=.|+..
T Consensus 69 f~a~~~------------------~~s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 69 LFSAGS------------------STSAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp EECSCH------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EECCCh------------------HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence 998853 123445555566675 778888763
No 446
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.07 E-value=0.0018 Score=54.97 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=51.8
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+++|+|.| .|-||+.+++.|...|.+|++.+|++.+ .+..... ++..+ +.++++++++++|+|
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~---~~~~~~~-----g~~~~-----~~~~l~~~l~~aDvV 217 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDL---LARIAEM-----GMEPF-----HISKAAQELRDVDVC 217 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHT-----TSEEE-----EGGGHHHHTTTCSEE
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHH---HHHHHHC-----CCeec-----ChhhHHHHhcCCCEE
Confidence 35789999999 5999999999999999999999886422 1222221 23322 234577788999999
Q ss_pred EEccc
Q 020608 82 FHLAS 86 (323)
Q Consensus 82 ih~a~ 86 (323)
+.+..
T Consensus 218 i~~~p 222 (293)
T 3d4o_A 218 INTIP 222 (293)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99874
No 447
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.07 E-value=0.0052 Score=52.73 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=69.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHH-HHh-hccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETA-HLK-ALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
|+|.|+|+ |.+|+.++..|++.|+ +|++++|++....... .+. .... .....+.. ++.+ .++++|+|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~-~~~~~i~~---~d~~----~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPF-TRRANIYA---GDYA----DLKGSDVV 71 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-SCCCEEEE---CCGG----GGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhh-cCCcEEEe---CCHH----HhCCCCEE
Confidence 58999998 9999999999999999 9999988643222211 011 1110 11222222 2322 36789999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEecc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSS 128 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 128 (323)
|-+++....+ ...-......|+.....+++.+.+.... .+|.+|.
T Consensus 72 iiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 117 (319)
T 1a5z_A 72 IVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN 117 (319)
T ss_dssp EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9998753321 1112346677888888888887765433 5555543
No 448
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=97.06 E-value=0.002 Score=56.74 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=49.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHh--cCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAV--TGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~V 81 (323)
.+.+|||+||+|.||..+++.+...|.+|+++.+ ..+ .+.++++. .. . ..|..+.+..+++. .++|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~---~~~~~~lG---a~-~--v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA---SELVRKLG---AD-D--VIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG---HHHHHHTT---CS-E--EEETTSSCHHHHHHTSCCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH---HHHHHHcC---CC-E--EEECCchHHHHHHhhcCCCCEE
Confidence 4679999999999999999999999999998873 222 23333331 12 1 12444433333333 479999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|+++|.
T Consensus 253 id~~g~ 258 (375)
T 2vn8_A 253 LDNVGG 258 (375)
T ss_dssp EESSCT
T ss_pred EECCCC
Confidence 999974
No 449
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=97.04 E-value=0.0022 Score=56.53 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=53.5
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|+|+|+ |.+|+.+++.|.+.|++|++++.++..... .+ .-..+..|..|.+.+.++.+++|.|+-.
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~-----~~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG-----QV-----ADEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG-----GG-----SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh-----hh-----CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 479999997 899999999999999999998765432111 11 1135678999999998888899998754
Q ss_pred c
Q 020608 85 A 85 (323)
Q Consensus 85 a 85 (323)
.
T Consensus 70 ~ 70 (380)
T 3ax6_A 70 L 70 (380)
T ss_dssp C
T ss_pred c
Confidence 3
No 450
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.04 E-value=0.0012 Score=58.71 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=51.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+.+++|+|+|+ |.+|+.+++.|...|. +|++++|+..+.. +..+.+ +... . +.+++.+++.++|+|
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~--~la~~~-----g~~~--~---~~~~l~~~l~~aDvV 231 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV--ELARDL-----GGEA--V---RFDELVDHLARSDVV 231 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH--HHHHHH-----TCEE--C---CGGGHHHHHHTCSEE
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH--HHHHHc-----CCce--e---cHHhHHHHhcCCCEE
Confidence 46899999997 9999999999999998 9999988642211 222222 1221 1 233566777899999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|.+.+.
T Consensus 232 i~at~~ 237 (404)
T 1gpj_A 232 VSATAA 237 (404)
T ss_dssp EECCSS
T ss_pred EEccCC
Confidence 999754
No 451
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.03 E-value=0.012 Score=51.48 Aligned_cols=77 Identities=12% Similarity=0.042 Sum_probs=50.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCE-EEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHH----Hh--c
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYT-VHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAA----AV--T 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~--~ 76 (323)
.+.+|||+|+ |.+|...++.+...|.+ |+++++++ +..+.++++ . ..+..+..|-.+.+++.+ +. +
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~---~~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDE---GRLKFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCH---HHHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH---HHHHHHHHh-c--hhcccccccccchHHHHHHHHHHhCCC
Confidence 4679999998 99999999998889997 88887754 333444444 1 123333344334444333 22 2
Q ss_pred CCCEEEEcccC
Q 020608 77 GCTGVFHLASP 87 (323)
Q Consensus 77 ~~d~Vih~a~~ 87 (323)
++|+||.++|.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 452
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.03 E-value=0.00068 Score=58.99 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=28.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCC-CEEEEEe
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERR-YTVHATV 36 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~ 36 (323)
+|++|.|.||||++|+.+++.|.+.. .+++++.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 56899999999999999999998764 5888775
No 453
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.02 E-value=0.0035 Score=46.59 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=55.2
Q ss_pred CCceEEEeccc---cHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCE
Q 020608 4 EAEVVCVTGGS---GCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTG 80 (323)
Q Consensus 4 ~~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (323)
+.++|.|.|+| |-+|..+++.|++.|++|+.+.++... + .+.. ...+ +.++.+.+|.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~---------i----~G~~-~~~s------~~el~~~vDl 72 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---------I----EGLK-CYRS------VRELPKDVDV 72 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---------E----TTEE-CBSS------GGGSCTTCCE
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe---------E----CCee-ecCC------HHHhCCCCCE
Confidence 45789999997 899999999999999997776443210 0 0111 1122 2333447898
Q ss_pred EEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 81 VFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 81 Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
++-+... .....+++.+.+.+++.++..+|+
T Consensus 73 vii~vp~------------------~~v~~v~~~~~~~g~~~i~~~~~~ 103 (138)
T 1y81_A 73 IVFVVPP------------------KVGLQVAKEAVEAGFKKLWFQPGA 103 (138)
T ss_dssp EEECSCH------------------HHHHHHHHHHHHTTCCEEEECTTS
T ss_pred EEEEeCH------------------HHHHHHHHHHHHcCCCEEEEcCcc
Confidence 8877521 123345555666777777776543
No 454
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.99 E-value=0.003 Score=54.98 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=67.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcH-----------------HHHHHHhhccCC--CCCeEEEEc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDE-----------------RETAHLKALEGA--DTRLRLFQI 63 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~~~~~~~~~--~~~~~~~~~ 63 (323)
+.++|+|.|+ |.+|++++..|+..|. ++++++++.-.. ......+.+... ..+++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 4679999996 8899999999999996 788887653111 111112222222 235667778
Q ss_pred cCCCHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEecc
Q 020608 64 DLLDYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSS 128 (323)
Q Consensus 64 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 128 (323)
++++..++.. ++++|+||.+... +.. .-..+.++|.+.++ .+|+.+.
T Consensus 196 ~i~~~~~~~~-~~~~DlVvd~~Dn---------~~~-------~r~~ln~~c~~~~~-p~i~~~~ 242 (353)
T 3h5n_A 196 NINDYTDLHK-VPEADIWVVSADH---------PFN-------LINWVNKYCVRANQ-PYINAGY 242 (353)
T ss_dssp CCCSGGGGGG-SCCCSEEEECCCC---------STT-------HHHHHHHHHHHTTC-CEEEEEE
T ss_pred ccCchhhhhH-hccCCEEEEecCC---------hHH-------HHHHHHHHHHHhCC-CEEEEEE
Confidence 8877665666 8899999997621 110 11224566777774 6666543
No 455
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.99 E-value=0.0027 Score=54.50 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=52.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCC-----------------cHHHHHHHhhccCCCCC--eEEEEc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLS-----------------DERETAHLKALEGADTR--LRLFQI 63 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-----------------~~~~~~~~~~~~~~~~~--~~~~~~ 63 (323)
+.++|+|.|+ |.+|+++++.|+..|. +++++++..- ........+.+...++. ++.+..
T Consensus 33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 4679999996 9999999999999996 6777765320 01111222233322334 444544
Q ss_pred cCC--------------CHhHHHHHhcCCCEEEEcc
Q 020608 64 DLL--------------DYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 64 Dl~--------------~~~~~~~~~~~~d~Vih~a 85 (323)
++. +.+.+.++++++|+||.+.
T Consensus 112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~t 147 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLV 147 (340)
T ss_dssp CCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECC
T ss_pred cccccCcccchhhhhcCCHHHHHhhhccCCEEEecC
Confidence 441 2345677888999999986
No 456
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.98 E-value=0.0007 Score=57.69 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=47.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+||+|.|+| +|.+|+.++..|++.|++|++.+|++.. .+.+... ++. -..+.+++++++|+||-
T Consensus 2 ~m~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~d~~~~~---~~~~~~~-----g~~-------~~~~~~~~~~~aDvvi~ 65 (302)
T 2h78_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA---VDGLVAA-----GAS-------AARSARDAVQGADVVIS 65 (302)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH---HHHHHHT-----TCE-------ECSSHHHHHTTCSEEEE
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHhCCCeEEEEcCCHHH---HHHHHHC-----CCe-------EcCCHHHHHhCCCeEEE
Confidence 578999998 5999999999999999999999886422 2222211 222 11245567788999998
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+..
T Consensus 66 ~vp 68 (302)
T 2h78_A 66 MLP 68 (302)
T ss_dssp CCS
T ss_pred ECC
Confidence 863
No 457
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.97 E-value=0.0016 Score=56.78 Aligned_cols=75 Identities=12% Similarity=0.075 Sum_probs=53.2
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccC------------------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDL------------------ 65 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------ 65 (323)
.+++|+|+|+ |-+|...++.|...|.+|++++|++...+. +..+ +.+++..|+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~---~~~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQ---VRSV-----GAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHH---HHHT-----TCEECCCC-------------CHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHc-----CCeEEeccccccccccchhhhhHHHHh
Confidence 4679999997 999999999999999999999987644332 2222 233332211
Q ss_pred CCHhHHHHHhcCCCEEEEcccC
Q 020608 66 LDYDAIAAAVTGCTGVFHLASP 87 (323)
Q Consensus 66 ~~~~~~~~~~~~~d~Vih~a~~ 87 (323)
.+.+.++++++++|+||.++..
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC
T ss_pred hhHHHHHHHHhcCCEEEECCCC
Confidence 1235677888999999988743
No 458
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.97 E-value=0.0015 Score=55.84 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=47.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
+||+|.|+| +|.+|+.++..|++.|++|++.+|++....... +. ++.. ..+++++++++|+||-
T Consensus 20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~---~~-----g~~~-------~~~~~~~~~~aDvvi~ 83 (310)
T 3doj_A 20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV---EH-----GASV-------CESPAEVIKKCKYTIA 83 (310)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH---HT-----TCEE-------CSSHHHHHHHCSEEEE
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH---HC-----CCeE-------cCCHHHHHHhCCEEEE
Confidence 578999998 699999999999999999999998764433221 11 2221 1234555667888887
Q ss_pred cc
Q 020608 84 LA 85 (323)
Q Consensus 84 ~a 85 (323)
+.
T Consensus 84 ~v 85 (310)
T 3doj_A 84 ML 85 (310)
T ss_dssp CC
T ss_pred Ec
Confidence 76
No 459
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.96 E-value=0.004 Score=52.26 Aligned_cols=74 Identities=8% Similarity=0.165 Sum_probs=49.0
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
+++++++|+|+ |.+|+.++..|++.|. +|++..|+.++... ..+.+... ..+.... +.+ + ..++|+|
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~--la~~~~~~-~~~~~~~--~~~---l---~~~aDiI 191 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQ--LAELVAAY-GEVKAQA--FEQ---L---KQSYDVI 191 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHH--HHHHHGGG-SCEEEEE--GGG---C---CSCEEEE
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHH--HHHHhhcc-CCeeEee--HHH---h---cCCCCEE
Confidence 46899999997 8999999999999996 99999997533222 22222211 1233332 211 1 1578999
Q ss_pred EEcccCC
Q 020608 82 FHLASPC 88 (323)
Q Consensus 82 ih~a~~~ 88 (323)
|++....
T Consensus 192 InaTp~g 198 (281)
T 3o8q_A 192 INSTSAS 198 (281)
T ss_dssp EECSCCC
T ss_pred EEcCcCC
Confidence 9998653
No 460
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.95 E-value=0.0022 Score=56.01 Aligned_cols=75 Identities=11% Similarity=0.129 Sum_probs=48.7
Q ss_pred CceEEEeccccHHHHHH-HHHH-HHCCCE-EEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH--hHHHHHhcCCC
Q 020608 5 AEVVCVTGGSGCIGSWL-VSLL-LERRYT-VHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY--DAIAAAVTGCT 79 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~d 79 (323)
..+|||+|+ |.+|... ++.+ ...|.+ |+++++++......+.++++ +...+ |..+. .++.++-.++|
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-----Ga~~v--~~~~~~~~~i~~~~gg~D 244 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-----DATYV--DSRQTPVEDVPDVYEQMD 244 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-----TCEEE--ETTTSCGGGHHHHSCCEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-----CCccc--CCCccCHHHHHHhCCCCC
Confidence 389999999 9999999 7777 667987 99999876411122333333 33433 54432 22444412689
Q ss_pred EEEEcccC
Q 020608 80 GVFHLASP 87 (323)
Q Consensus 80 ~Vih~a~~ 87 (323)
+||++++.
T Consensus 245 vvid~~g~ 252 (357)
T 2b5w_A 245 FIYEATGF 252 (357)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999874
No 461
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=96.93 E-value=0.0036 Score=55.26 Aligned_cols=74 Identities=19% Similarity=0.113 Sum_probs=54.9
Q ss_pred CCCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhc--CC
Q 020608 1 MSKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVT--GC 78 (323)
Q Consensus 1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~ 78 (323)
|+.++|+|+|+|+ |.+|..+++.+.+.|++|+++...+..... .. --..+..|..|.+.+.++++ ++
T Consensus 7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-----~~-----~d~~~~~~~~d~~~l~~~~~~~~~ 75 (391)
T 1kjq_A 7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-----HV-----AHRSHVINMLDGDALRRVVELEKP 75 (391)
T ss_dssp TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-----GG-----SSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-----hh-----ccceEECCCCCHHHHHHHHHHcCC
Confidence 4556789999987 789999999999999999999776533211 11 11346678888888887775 78
Q ss_pred CEEEEcc
Q 020608 79 TGVFHLA 85 (323)
Q Consensus 79 d~Vih~a 85 (323)
|.|+...
T Consensus 76 d~v~~~~ 82 (391)
T 1kjq_A 76 HYIVPEI 82 (391)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9988643
No 462
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.93 E-value=0.0042 Score=54.81 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=50.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCC-----------------
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLL----------------- 66 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------- 66 (323)
.+++|+|+|+ |-+|..+++.+...|.+|++++|++...+... .+ +..++..|..
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~---~~-----Ga~~~~i~~~~~~~~~~~~~~~~~~s~ 241 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE---SL-----GGKFITVDDEAMKTAETAGGYAKEMGE 241 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH---HT-----TCEECCC--------------------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hc-----CCeEEeecccccccccccccchhhcCH
Confidence 5789999995 99999999999999999999988765433322 22 1222211110
Q ss_pred -----CHhHHHHHhcCCCEEEEcc
Q 020608 67 -----DYDAIAAAVTGCTGVFHLA 85 (323)
Q Consensus 67 -----~~~~~~~~~~~~d~Vih~a 85 (323)
+.+.+.+++.++|+||+++
T Consensus 242 ~~~~~~~~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 242 EFRKKQAEAVLKELVKTDIAITTA 265 (384)
T ss_dssp ---CCHHHHHHHHHTTCSEEEECC
T ss_pred HHHhhhHHHHHHHhCCCCEEEECC
Confidence 1234777888999999988
No 463
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.93 E-value=0.0025 Score=55.41 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=50.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCC--HhHHHHHh-cCCCE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLD--YDAIAAAV-TGCTG 80 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-~~~d~ 80 (323)
.+.+|||+||+|.||...++.+...|.+|+++++++ +..+.++++.. . .. .|..+ .+.+.++- .++|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~---~~~~~~~~lGa---~-~v--i~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN---ETIEWTKKMGA---D-IV--LNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH---HHHHHHHHHTC---S-EE--ECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhcCC---c-EE--EECCccHHHHHHHhCCCCccE
Confidence 478999999999999999999999999999998753 33344444321 1 11 22222 22333331 26899
Q ss_pred EEEcccC
Q 020608 81 VFHLASP 87 (323)
Q Consensus 81 Vih~a~~ 87 (323)
||++++.
T Consensus 221 v~d~~g~ 227 (346)
T 3fbg_A 221 VFCTFNT 227 (346)
T ss_dssp EEESSCH
T ss_pred EEECCCc
Confidence 9999863
No 464
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.92 E-value=0.007 Score=54.70 Aligned_cols=100 Identities=23% Similarity=0.325 Sum_probs=69.8
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHH-hcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAA-VTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 83 (323)
.++|+|.|| |-+|.+|++.| +++++|.++.+++.... ...+.+ ++..++.||-+|.+-+++. ++.+|+++-
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~--~la~~l----~~~~Vi~GD~td~~~L~ee~i~~~D~~ia 306 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAE--KLSEEL----ENTIVFCGDAADQELLTEENIDQVDVFIA 306 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHH--HHHHHC----TTSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHH--HHHHHC----CCceEEeccccchhhHhhcCchhhcEEEE
Confidence 468999996 99999999997 56799999877542222 222333 4678899999999988764 567899986
Q ss_pred cccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 84 LASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
+.+. + ++|+..+ -.|++.|++++|-.-.-
T Consensus 307 ~T~~--------D-----e~Ni~~~----llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 307 LTNE--------D-----ETNIMSA----MLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp CCSC--------H-----HHHHHHH----HHHHHTTCSEEEEECSC
T ss_pred cccC--------c-----HHHHHHH----HHHHHcCCccccccccc
Confidence 6532 1 3455443 24677888887665443
No 465
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.92 E-value=0.0095 Score=50.58 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=70.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
.++||.|+|| |.+|+.++..|+..|. +|++++++.........+.... .+++.. ..| + +.++++|+|
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~--~~~i~~-t~d------~-~~l~~aD~V 81 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN--LPNVEI-SKD------L-SASAHSKVV 81 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT--CTTEEE-ESC------G-GGGTTCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc--CCCeEE-eCC------H-HHHCCCCEE
Confidence 3579999996 9999999999999998 9999988753111111111111 124443 233 2 347899999
Q ss_pred EEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcC-EEEEeccc
Q 020608 82 FHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVK-RVVVTSSI 129 (323)
Q Consensus 82 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~ 129 (323)
|-+++... + ...-...+..|+.-.+.+.+.+.+.... .++++|-.
T Consensus 82 i~aag~~~-p--G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 82 IFTVNSLG-S--SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred EEcCCCCC-C--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence 99998731 1 1233456778888888888888776533 55565553
No 466
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.92 E-value=0.0047 Score=51.38 Aligned_cols=66 Identities=12% Similarity=0.006 Sum_probs=48.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
+++++|+|+ |..|+.++..|++.|.+|++..|+.++.+... .+ ++... ++.+. .++|+||++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la---~~-----~~~~~--~~~~l-------~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ---RL-----GCDCF--MEPPK-------SAFDLIINA 179 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH---HH-----TCEEE--SSCCS-------SCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HC-----CCeEe--cHHHh-------ccCCEEEEc
Confidence 689999996 99999999999999999999999876654433 22 12222 23221 278999999
Q ss_pred ccCC
Q 020608 85 ASPC 88 (323)
Q Consensus 85 a~~~ 88 (323)
....
T Consensus 180 Tp~G 183 (269)
T 3phh_A 180 TSAS 183 (269)
T ss_dssp CTTC
T ss_pred ccCC
Confidence 7654
No 467
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.92 E-value=0.0037 Score=56.00 Aligned_cols=95 Identities=12% Similarity=0.239 Sum_probs=61.7
Q ss_pred CceEEEeccccHHHHHHHHHHHHCC-C---EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCC--CH-hHHHHHhcC
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERR-Y---TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLL--DY-DAIAAAVTG 77 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~-~~~~~~~~~ 77 (323)
.++|+|.| .|.||+.+++.|+++. + +|++.+........ .+.. ++.+...+++ |. +.+++++++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~---~~~~-----g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDV---AQQY-----GVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCH---HHHH-----TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhH---Hhhc-----CCceeEEeccchhHHHHHHHHhcC
Confidence 36899999 6999999999999864 4 68887665433221 1111 3455555554 44 335567777
Q ss_pred CCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 78 CTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 78 ~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
.|+|||++-.. ....++++|.+.|+ -|++++
T Consensus 84 ~DvVIN~s~~~------------------~~l~Im~acleaGv---~YlDTa 114 (480)
T 2ph5_A 84 NDFLIDVSIGI------------------SSLALIILCNQKGA---LYINAA 114 (480)
T ss_dssp TCEEEECCSSS------------------CHHHHHHHHHHHTC---EEEESS
T ss_pred CCEEEECCccc------------------cCHHHHHHHHHcCC---CEEECC
Confidence 79999866321 13458889988874 445554
No 468
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=96.90 E-value=0.0026 Score=56.57 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+++|+|+|+ |.+|+.+++.+.+.|++|++++ .+..... ++. .....+.+|..|.+.+.++.+.+|+|+-
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~-----~~a---d~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK-----QIS---AHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG-----GGC---CSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH-----Hhc---cccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 4679999996 8999999999999999999998 5432211 111 1123567999999999999999998763
No 469
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.90 E-value=0.0018 Score=56.68 Aligned_cols=74 Identities=15% Similarity=0.059 Sum_probs=50.5
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCH-hHHHHHhcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDY-DAIAAAVTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vi 82 (323)
.+.+|||+|+ |.+|..+++.+...|.+|+++++++.+.+... ++. .. .. .|..+. +..+++..++|+||
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~---~lG---a~-~v--~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM---KMG---AD-HY--IATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH---HHT---CS-EE--EEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---HcC---CC-EE--EcCcCchHHHHHhhcCCCEEE
Confidence 4679999999 99999999988888999999998765543322 221 11 11 233333 33333335799999
Q ss_pred EcccC
Q 020608 83 HLASP 87 (323)
Q Consensus 83 h~a~~ 87 (323)
.+++.
T Consensus 249 d~~g~ 253 (360)
T 1piw_A 249 VCASS 253 (360)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99875
No 470
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.89 E-value=0.0045 Score=53.66 Aligned_cols=105 Identities=12% Similarity=0.060 Sum_probs=65.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCC--------------C---cHHHHHHHhhccCCCC--CeEEEEc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNL--------------S---DERETAHLKALEGADT--RLRLFQI 63 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~---~~~~~~~~~~~~~~~~--~~~~~~~ 63 (323)
+..+|+|.|+ |.+|+++++.|+..|. ++++++... . ........+.+...++ .++.+..
T Consensus 35 ~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 35 RASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 4579999995 8999999999999997 777774221 0 1111222223333233 4556666
Q ss_pred cCCCHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 64 DLLDYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 64 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
++++ ...++++++|+||.+... ...-..+.++|++.+ ..+|..++.
T Consensus 114 ~~~~--~~~~~~~~~dvVv~~~d~-----------------~~~r~~ln~~~~~~~-ip~i~~~~~ 159 (346)
T 1y8q_A 114 DIEK--KPESFFTQFDAVCLTCCS-----------------RDVIVKVDQICHKNS-IKFFTGDVF 159 (346)
T ss_dssp CGGG--CCHHHHTTCSEEEEESCC-----------------HHHHHHHHHHHHHTT-CEEEEEEEE
T ss_pred ccCc--chHHHhcCCCEEEEcCCC-----------------HHHHHHHHHHHHHcC-CCEEEEeec
Confidence 6644 235678899999987421 222334666787777 477776655
No 471
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.89 E-value=0.0014 Score=57.18 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=31.0
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
++|+|.|.|+ |.+|+.++..|++.|++|++++|++
T Consensus 3 ~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4579999996 9999999999999999999998864
No 472
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.89 E-value=0.0015 Score=56.08 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=31.3
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS 40 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (323)
+++++|.|+|+ |.+|+.++..|++.|++|++.+|++.
T Consensus 4 ~~~~kI~vIGa-G~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 4 PAAGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCceEEEEee-CHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34689999995 99999999999999999999988754
No 473
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.88 E-value=0.00085 Score=57.03 Aligned_cols=65 Identities=14% Similarity=0.050 Sum_probs=47.3
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
+|+|.|+| .|.+|+.++..|++.|++|++.+|++...+..... +++. ..+++++.+ +|+||-+
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA--------GATL-------ADSVADVAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT--------TCEE-------CSSHHHHTT-SSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCEE-------cCCHHHHHh-CCEEEEE
Confidence 46899998 69999999999999999999999987554332211 2221 123566677 9999987
Q ss_pred cc
Q 020608 85 AS 86 (323)
Q Consensus 85 a~ 86 (323)
..
T Consensus 78 vp 79 (296)
T 3qha_A 78 VL 79 (296)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 474
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.88 E-value=0.0044 Score=54.56 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=53.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEcc----------------CCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQID----------------LLD 67 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~~ 67 (323)
...+|+|+|+ |-+|...++.+...|.+|+++++++...+.. +.+ +..++..+ +++
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---~~~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV---ASL-----GAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH---HHT-----TCEECCCCC-----------------C
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHc-----CCceeecccccccccccccchhhhcch
Confidence 4579999997 9999999999999999999999876543322 222 22222221 222
Q ss_pred ------HhHHHHHhcCCCEEEEcccC
Q 020608 68 ------YDAIAAAVTGCTGVFHLASP 87 (323)
Q Consensus 68 ------~~~~~~~~~~~d~Vih~a~~ 87 (323)
.+.++++++++|+||.++..
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvli 285 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALI 285 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcC
Confidence 24678888999999998754
No 475
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.87 E-value=0.0032 Score=52.45 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=48.0
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++++|+++|+|+++.+|+.++..|++.|..|++..|.. .++++.++++|+|
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-----------------------------~~L~~~~~~ADIV 207 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-----------------------------KDLSLYTRQADLI 207 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-----------------------------SCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHhhcCCEE
Confidence 35789999999999999999999999999999875431 1366778899999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
|...+.
T Consensus 208 I~Avg~ 213 (285)
T 3p2o_A 208 IVAAGC 213 (285)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 999875
No 476
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.86 E-value=0.0035 Score=53.40 Aligned_cols=36 Identities=17% Similarity=0.090 Sum_probs=31.4
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLS 40 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (323)
++|+|.|+| +|.+|+.++..|++.|++|++.+|++.
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 457899998 699999999999999999999988653
No 477
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.86 E-value=0.0038 Score=53.31 Aligned_cols=68 Identities=12% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+|+|.|.| .|-||+.+++.|...|++|++.+|++.... .+....+ .++++++++++|+|
T Consensus 136 ~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~~~~~~~----~~~l~ell~~aDiV 197 (315)
T 3pp8_A 136 TREEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP-------------GVESYVG----REELRAFLNQTRVL 197 (315)
T ss_dssp CSTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT-------------TCEEEES----HHHHHHHHHTCSEE
T ss_pred CcCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh-------------hhhhhcc----cCCHHHHHhhCCEE
Confidence 35789999999 599999999999999999999998763211 2222211 35788899999999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
+.+...
T Consensus 198 ~l~~Pl 203 (315)
T 3pp8_A 198 INLLPN 203 (315)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 877654
No 478
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.84 E-value=0.0029 Score=55.54 Aligned_cols=74 Identities=19% Similarity=0.141 Sum_probs=51.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+.+|||+|+ |.+|...++.+...|.+|+++++++.+.+ .++++. .. ...|..+.+.++++..++|+||.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~---~a~~lG-----a~-~vi~~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE---AAKALG-----AD-EVVNSRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH---HHHHHT-----CS-EEEETTCHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHcC-----Cc-EEeccccHHHHHHhhcCCCEEEE
Confidence 4679999997 88999999988889999999988654433 233331 11 12345555545554468999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
+++.
T Consensus 264 ~~g~ 267 (369)
T 1uuf_A 264 TVAA 267 (369)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9874
No 479
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.83 E-value=0.0029 Score=54.35 Aligned_cols=74 Identities=27% Similarity=0.365 Sum_probs=52.3
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+.+|||+||+|.+|...++.+...|.+|+++.+. . ..+.++++.. . + ..|..+.+.+.+.++++|+||.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~---~-~~~~~~~lGa---~-~--~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK---R-NHAFLKALGA---E-Q--CINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH---H-HHHHHHHHTC---S-E--EEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc---c-hHHHHHHcCC---C-E--EEeCCCcchhhhhccCCCEEEE
Confidence 46799999999999999999999999999988642 1 2344444321 1 1 2344444435666688999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
+.|.
T Consensus 222 ~~g~ 225 (321)
T 3tqh_A 222 LVGG 225 (321)
T ss_dssp SSCH
T ss_pred CCCc
Confidence 9863
No 480
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.81 E-value=0.0014 Score=56.11 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=45.8
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++||+|.|+| +|.+|+.++..|++.|+ +|++.+|++ +....+.+.+. ++.. . ++.+++++++|+|
T Consensus 22 ~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~-~~~~~~~~~~~-----g~~~----~---~~~~e~~~~aDvV 87 (312)
T 3qsg_A 22 SNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAAS-AESWRPRAEEL-----GVSC----K---ASVAEVAGECDVI 87 (312)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSC-HHHHHHHHHHT-----TCEE----C---SCHHHHHHHCSEE
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCC-CHHHHHHHHHC-----CCEE----e---CCHHHHHhcCCEE
Confidence 4568999999 59999999999999999 999998863 11222222221 2221 1 1344556678999
Q ss_pred EEccc
Q 020608 82 FHLAS 86 (323)
Q Consensus 82 ih~a~ 86 (323)
|-+..
T Consensus 88 i~~vp 92 (312)
T 3qsg_A 88 FSLVT 92 (312)
T ss_dssp EECSC
T ss_pred EEecC
Confidence 98764
No 481
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.80 E-value=0.0014 Score=59.14 Aligned_cols=120 Identities=10% Similarity=0.056 Sum_probs=69.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC-----CCEEEEEecCCCcHHHHHHH-hhc-cCCCCCeEEEEccCCCHhHHHHHhc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER-----RYTVHATVKNLSDERETAHL-KAL-EGADTRLRLFQIDLLDYDAIAAAVT 76 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (323)
+++||.|.||.+..|.+++..|+.+ +.+|++.++++...+..... ..+ +.......+... .++.++++
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t-----~D~~eal~ 101 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT 101 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE-----CCHHHHHc
Confidence 3469999998776688898889887 67899999875332221111 111 111112222221 23566788
Q ss_pred CCCEEEEcccCCccCCCCCc----------------h--hhhhhHHHHHHHHHHHHHhhCCcCEEEEecc
Q 020608 77 GCTGVFHLASPCIVDKVEDP----------------Q--NQLLNPAVKGTVNVLTAAKALGVKRVVVTSS 128 (323)
Q Consensus 77 ~~d~Vih~a~~~~~~~~~~~----------------~--~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 128 (323)
++|+||.+++....+....+ + .....-|+.....+++.+++.+...++...|
T Consensus 102 ~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~T 171 (472)
T 1u8x_X 102 DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS 171 (472)
T ss_dssp SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 99999999976422110000 0 1123456777888888888877554444443
No 482
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.80 E-value=0.0043 Score=53.81 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=47.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHh-cCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAV-TGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~ 78 (323)
.+.+|||+|+ |.+|..+++.+...|. +|+++++++. ..+.++++ . . . ..|..+.+ .+.++- .++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~---~~~~~~~l-a---~-~--v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPY---RLAFARPY-A---D-R--LVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH---HHGGGTTT-C---S-E--EECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHh-H---H-h--ccCcCccCHHHHHHHhcCCCC
Confidence 4678999999 9999999999988999 9999987532 21222221 1 1 1 23443322 222221 368
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||++++.
T Consensus 233 D~vid~~g~ 241 (343)
T 2dq4_A 233 EVLLEFSGN 241 (343)
T ss_dssp EEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999874
No 483
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.80 E-value=0.004 Score=54.42 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=51.0
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccC-CCHhHHHHHhcCCCEEEE
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDL-LDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~d~Vih 83 (323)
||+|+|+|| |..|..++..+.+.|++|++++.++..... ++ --+++..|. .|.+.+....+++|.|+-
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~-----~~-----aD~~~~~~~~~d~~~~~~~~~~~D~v~~ 69 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIR-----NY-----ADEFYCFDVIKEPEKLLELSKRVDAVLP 69 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTT-----TT-----SSEEEECCTTTCHHHHHHHHTSSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhH-----hh-----CCEEEECCCCcCHHHHHHHhcCCCEEEE
Confidence 689999995 899999999999999999999876543221 11 113455554 466777777789998875
Q ss_pred cc
Q 020608 84 LA 85 (323)
Q Consensus 84 ~a 85 (323)
..
T Consensus 70 ~~ 71 (363)
T 4ffl_A 70 VN 71 (363)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 484
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.80 E-value=0.0042 Score=55.47 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=31.8
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
+|++|.|.| .||+|..++..|++.|++|++++.++
T Consensus 20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 578999998 79999999999999999999998753
No 485
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.79 E-value=0.011 Score=50.17 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=61.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhc-----cCCCCCeEEEEccCCCHhHHHHHhcCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKAL-----EGADTRLRLFQIDLLDYDAIAAAVTGC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (323)
.||||-++| .|-+|+.+++.|++.||+|++.+|++++.+.....-.. .+.-....++..=+.+.+.+++++.+.
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~ 80 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDD 80 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSS
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhch
Confidence 368999999 79999999999999999999999875333222111000 000012344455555666666655322
Q ss_pred ----------CEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEE
Q 020608 79 ----------TGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVV 124 (323)
Q Consensus 79 ----------d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 124 (323)
++||.+... + ...++.+.+.+++.|+ +|+
T Consensus 81 ~g~~~~~~~g~iiId~sT~--------~--------p~~~~~~a~~~~~~G~-~~l 119 (300)
T 3obb_A 81 DGLLAHIAPGTLVLECSTI--------A--------PTSARKIHAAARERGL-AML 119 (300)
T ss_dssp SSSTTSCCC-CEEEECSCC--------C--------HHHHHHHHHHHHTTTC-EEE
T ss_pred hhhhhcCCCCCEEEECCCC--------C--------HHHHHHHHHHHHHcCC-EEE
Confidence 345544422 2 3345667777777764 444
No 486
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.79 E-value=0.0016 Score=55.55 Aligned_cols=67 Identities=21% Similarity=0.244 Sum_probs=46.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
++|+|.|+| .|.+|+.+++.|++.|++|++.+|++... +.+.+. +... .++++++++++|+||-
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~---~~~~~~-----g~~~-------~~~~~e~~~~aDvVi~ 71 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKA---AALVAA-----GAHL-------CESVKAALSASPATIF 71 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH---HHHHHH-----TCEE-------CSSHHHHHHHSSEEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHC-----CCee-------cCCHHHHHhcCCEEEE
Confidence 467899998 69999999999999999999998864322 222211 1211 1234556677899998
Q ss_pred ccc
Q 020608 84 LAS 86 (323)
Q Consensus 84 ~a~ 86 (323)
+..
T Consensus 72 ~vp 74 (306)
T 3l6d_A 72 VLL 74 (306)
T ss_dssp CCS
T ss_pred EeC
Confidence 763
No 487
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.79 E-value=0.00081 Score=56.86 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=46.4
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEEc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFHL 84 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 84 (323)
||+|.|.| +|.+|+.++..|++.|++|++.+|++...+..... ++.. ..+.+++++++|+||-+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL--------GARQ-------ASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH--------TCEE-------CSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CCee-------cCCHHHHHHcCCEEEEE
Confidence 47899998 69999999999999999999999876443332211 1211 11345556678888877
Q ss_pred cc
Q 020608 85 AS 86 (323)
Q Consensus 85 a~ 86 (323)
..
T Consensus 65 v~ 66 (287)
T 3pdu_A 65 LA 66 (287)
T ss_dssp CS
T ss_pred cC
Confidence 63
No 488
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.78 E-value=0.0079 Score=53.98 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=30.0
Q ss_pred ceEEEeccccHHHHHHHHHHHHCCCEEEEEecCC
Q 020608 6 EVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNL 39 (323)
Q Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (323)
|+|.|.| +|++|..++..|++.|++|++++|++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4799998 69999999999999999999998864
No 489
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.77 E-value=0.0021 Score=55.03 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=47.1
Q ss_pred CCCceEEEeccccHHHHHHHHHHHHCCC--EEEEEecCCCcHHHHHHHhhccCCCCCeE-EEEccCCCHhHHHH-HhcCC
Q 020608 3 KEAEVVCVTGGSGCIGSWLVSLLLERRY--TVHATVKNLSDERETAHLKALEGADTRLR-LFQIDLLDYDAIAA-AVTGC 78 (323)
Q Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~-~~~~~ 78 (323)
+++|+|.|+| .|.||..++..|.+.|+ +|++.+|++.. .+.+.+. ++. ....| +++ +++++
T Consensus 31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~---~~~a~~~-----G~~~~~~~~------~~~~~~~~a 95 (314)
T 3ggo_A 31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES---ISKAVDL-----GIIDEGTTS------IAKVEDFSP 95 (314)
T ss_dssp CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH---HHHHHHT-----TSCSEEESC------TTGGGGGCC
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHH---HHHHHHC-----CCcchhcCC------HHHHhhccC
Confidence 4558999999 79999999999999999 99999886422 2222222 110 11122 234 56789
Q ss_pred CEEEEccc
Q 020608 79 TGVFHLAS 86 (323)
Q Consensus 79 d~Vih~a~ 86 (323)
|+||-+..
T Consensus 96 DvVilavp 103 (314)
T 3ggo_A 96 DFVMLSSP 103 (314)
T ss_dssp SEEEECSC
T ss_pred CEEEEeCC
Confidence 99998864
No 490
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.76 E-value=0.0032 Score=53.96 Aligned_cols=68 Identities=9% Similarity=0.134 Sum_probs=51.2
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+|+|.|.| .|-||+.+++.|...|++|++.+|++.... .+... ....+++++++++|+|
T Consensus 137 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~~~~~----~~~~~l~ell~~aDvV 198 (324)
T 3hg7_A 137 GLKGRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERA-------------GFDQV----YQLPALNKMLAQADVI 198 (324)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCT-------------TCSEE----ECGGGHHHHHHTCSEE
T ss_pred ccccceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhh-------------hhhcc----cccCCHHHHHhhCCEE
Confidence 35789999999 699999999999999999999988753211 11001 1245678889999999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
+-+...
T Consensus 199 ~l~lPl 204 (324)
T 3hg7_A 199 VSVLPA 204 (324)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 888754
No 491
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.76 E-value=0.0038 Score=52.39 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=47.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHH--HHhcCCC
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIA--AAVTGCT 79 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~--~~~~~~d 79 (323)
++++++++|.|++|.+|+.++..|++.|..|++..|... +++ +.++++|
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-----------------------------~l~l~~~~~~AD 212 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-----------------------------TEDMIDYLRTAD 212 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-----------------------------HHHHHHHHHTCS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-----------------------------CchhhhhhccCC
Confidence 357899999999999999999999999999998866320 233 7788999
Q ss_pred EEEEcccC
Q 020608 80 GVFHLASP 87 (323)
Q Consensus 80 ~Vih~a~~ 87 (323)
+||...+.
T Consensus 213 IVI~Avg~ 220 (300)
T 4a26_A 213 IVIAAMGQ 220 (300)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999875
No 492
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.74 E-value=0.0034 Score=56.77 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=35.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhc
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKAL 51 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~ 51 (323)
.+.+|||+||+|.||...+..+...|.+|+++++++ ...+.++++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~---~~~~~~~~l 272 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP---QKAEICRAM 272 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH---HHHHHHHhh
Confidence 467899999999999999999999999999988743 333444444
No 493
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.74 E-value=0.0042 Score=53.58 Aligned_cols=65 Identities=14% Similarity=0.002 Sum_probs=48.6
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+|+|.|.| .|-||+.+++.|...|++|++.+|++... ..+.. ..+++++++++|+|
T Consensus 168 ~l~gktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~-------~~sl~ell~~aDvV 226 (340)
T 4dgs_A 168 SPKGKRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSG-------------VDWIA-------HQSPVDLARDSDVL 226 (340)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTT-------------SCCEE-------CSSHHHHHHTCSEE
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCcccc-------------cCcee-------cCCHHHHHhcCCEE
Confidence 35789999999 59999999999999999999998875321 01111 13467788899999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
+-+...
T Consensus 227 il~vP~ 232 (340)
T 4dgs_A 227 AVCVAA 232 (340)
T ss_dssp EECC--
T ss_pred EEeCCC
Confidence 887643
No 494
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.73 E-value=0.0051 Score=53.37 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=51.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++.+|+|.|.| .|-||+.+++.|...|++|++.+|++......... ++..+ ++++++++++|+|
T Consensus 161 ~l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~~-------~~l~ell~~aDvV 224 (351)
T 3jtm_A 161 DLEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET--------GAKFV-------EDLNEMLPKCDVI 224 (351)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH--------CCEEC-------SCHHHHGGGCSEE
T ss_pred cccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC--------CCeEc-------CCHHHHHhcCCEE
Confidence 36789999999 69999999999999999999998876443322111 22211 3467788999999
Q ss_pred EEcccC
Q 020608 82 FHLASP 87 (323)
Q Consensus 82 ih~a~~ 87 (323)
+.+...
T Consensus 225 ~l~~Pl 230 (351)
T 3jtm_A 225 VINMPL 230 (351)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 888754
No 495
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.73 E-value=0.0023 Score=55.61 Aligned_cols=69 Identities=14% Similarity=0.131 Sum_probs=48.6
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVFH 83 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 83 (323)
.+.+|||+|+ |.||...++.+...|.+|+++++++.+.+. ++++. .... + .+.+.+. +++|+||+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---~~~lG---a~~v-~----~~~~~~~---~~~D~vid 240 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD---ALSMG---VKHF-Y----TDPKQCK---EELDFIIS 240 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH---HHHTT---CSEE-E----SSGGGCC---SCEEEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH---HHhcC---CCee-c----CCHHHHh---cCCCEEEE
Confidence 4679999997 999999999998899999999887655433 33331 1222 2 3333332 28999999
Q ss_pred cccC
Q 020608 84 LASP 87 (323)
Q Consensus 84 ~a~~ 87 (323)
+++.
T Consensus 241 ~~g~ 244 (348)
T 3two_A 241 TIPT 244 (348)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 9875
No 496
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=96.73 E-value=0.0056 Score=57.04 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=65.6
Q ss_pred CceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcH-----------------HHHHHHhhccCCC--CCeEEEEcc
Q 020608 5 AEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDE-----------------RETAHLKALEGAD--TRLRLFQID 64 (323)
Q Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~~~~~~~~~~--~~~~~~~~D 64 (323)
..+|+|.|+ |.+|+++++.|+..|. ++++++...-.. ......+.+...+ .+++.+..+
T Consensus 17 ~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~ 95 (640)
T 1y8q_B 17 GGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDS 95 (640)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESC
T ss_pred cCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecc
Confidence 468999996 9999999999999996 788776433111 1111122233333 356677788
Q ss_pred CCCHhHHHHHhcCCCEEEEcccCCccCCCCCchhhhhhHHHHHHHHHHHHHhhCCcCEEEEeccc
Q 020608 65 LLDYDAIAAAVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAAKALGVKRVVVTSSI 129 (323)
Q Consensus 65 l~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 129 (323)
+++.....++++++|+||.+... ...-..+.+.|.+.++ .+|..++.
T Consensus 96 i~~~~~~~~~~~~~DlVvda~Dn-----------------~~aR~~ln~~c~~~~i-PlI~~g~~ 142 (640)
T 1y8q_B 96 IMNPDYNVEFFRQFILVMNALDN-----------------RAARNHVNRMCLAADV-PLIESGTA 142 (640)
T ss_dssp TTSTTSCHHHHTTCSEEEECCSC-----------------HHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred cchhhhhHhhhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEEe
Confidence 86543334678899999988521 1223345556666663 56655444
No 497
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.72 E-value=0.0028 Score=55.03 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=48.7
Q ss_pred CCceEEEeccccHHHHHHHHHHHHC--CCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCC-HhHHHHHhc--CC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLER--RYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLD-YDAIAAAVT--GC 78 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~ 78 (323)
.+.+|||+|+ |.||...++.+... |.+|+++++++ +..+.++++. .. +. .|..+ .+.++++-. ++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~---~~~~~~~~lG---a~-~v--i~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSK---KHRDFALELG---AD-YV--SEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCH---HHHHHHHHHT---CS-EE--ECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCH---HHHHHHHHhC---CC-EE--eccccchHHHHHhhcCCCc
Confidence 4679999999 99999999988888 99999988753 2233333331 11 11 23323 333334332 68
Q ss_pred CEEEEcccC
Q 020608 79 TGVFHLASP 87 (323)
Q Consensus 79 d~Vih~a~~ 87 (323)
|+||.+++.
T Consensus 240 D~vid~~g~ 248 (344)
T 2h6e_A 240 SIAIDLVGT 248 (344)
T ss_dssp EEEEESSCC
T ss_pred cEEEECCCC
Confidence 999999874
No 498
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.72 E-value=0.019 Score=50.31 Aligned_cols=74 Identities=16% Similarity=0.110 Sum_probs=49.1
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHh---HHHHHhc-CCC
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYD---AIAAAVT-GCT 79 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~-~~d 79 (323)
.+.+|||+||+|.+|...++.+...|.+|+++. ++ +..+.++++. .. +. .|..+.+ .+.++.. ++|
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~---~~~~~~~~lG---a~-~v--i~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SP---HNFDLAKSRG---AE-EV--FDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CG---GGHHHHHHTT---CS-EE--EETTSTTHHHHHHHHTTTCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CH---HHHHHHHHcC---Cc-EE--EECCCchHHHHHHHHccCCcc
Confidence 567899999999999999999999999999885 32 2233444432 11 12 2333332 2333322 589
Q ss_pred EEEEcccC
Q 020608 80 GVFHLASP 87 (323)
Q Consensus 80 ~Vih~a~~ 87 (323)
+||.++|.
T Consensus 234 ~v~d~~g~ 241 (371)
T 3gqv_A 234 YALDCITN 241 (371)
T ss_dssp EEEESSCS
T ss_pred EEEECCCc
Confidence 99999874
No 499
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.72 E-value=0.0037 Score=51.66 Aligned_cols=68 Identities=21% Similarity=0.337 Sum_probs=48.9
Q ss_pred CCceEEEeccccHHHHHHHHHHHHCCC-EEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEEE
Q 020608 4 EAEVVCVTGGSGCIGSWLVSLLLERRY-TVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGVF 82 (323)
Q Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 82 (323)
++ +++|+|+ |.+|++++..|++.|. +|++.+|+++ ..+.+.. .+... ..+++.+.++++|+||
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~------ka~~la~---~~~~~-----~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIE------RAKALDF---PVKIF-----SLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHH------HHHTCCS---SCEEE-----EGGGHHHHHHTCSEEE
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHH------HHHHHHH---HcccC-----CHHHHHhhhcCCCEEE
Confidence 46 8999996 9999999999999998 8999998642 2222322 22211 2245666778899999
Q ss_pred EcccC
Q 020608 83 HLASP 87 (323)
Q Consensus 83 h~a~~ 87 (323)
++...
T Consensus 172 natp~ 176 (253)
T 3u62_A 172 NTTSV 176 (253)
T ss_dssp ECSST
T ss_pred ECCCC
Confidence 98754
No 500
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.69 E-value=0.0063 Score=49.06 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=50.9
Q ss_pred CCCCceEEEeccccHHHHHHHHHHHHCCCEEEEEecCCCcHHHHHHHhhccCCCCCeEEEEccCCCHhHHHHHhcCCCEE
Q 020608 2 SKEAEVVCVTGGSGCIGSWLVSLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQIDLLDYDAIAAAVTGCTGV 81 (323)
Q Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 81 (323)
++++++|||.|| |-+|...++.|++.|.+|++++.... .. ...+.. ..+++++..+.... .++++|.|
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~-~~-l~~l~~----~~~i~~i~~~~~~~-----dL~~adLV 95 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS-AE-INEWEA----KGQLRVKRKKVGEE-----DLLNVFFI 95 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC-HH-HHHHHH----TTSCEEECSCCCGG-----GSSSCSEE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC-HH-HHHHHH----cCCcEEEECCCCHh-----HhCCCCEE
Confidence 467899999996 99999999999999999999976542 22 222211 12567776666532 25678999
Q ss_pred EEcc
Q 020608 82 FHLA 85 (323)
Q Consensus 82 ih~a 85 (323)
|-+.
T Consensus 96 IaAT 99 (223)
T 3dfz_A 96 VVAT 99 (223)
T ss_dssp EECC
T ss_pred EECC
Confidence 8554
Done!