BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020610
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3SW78|GRPE_NITWN Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=grpE PE=3 SV=1
Length = 197
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 8/99 (8%)
Query: 185 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 244
++ L A N+++ + +D+ LR+ AEMEN++ RT RE +++ + I FA+ +L++ADNL R
Sbjct: 34 DDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQR 93
Query: 245 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
A V P++ A P LK+L+EGVE+TE+ L
Sbjct: 94 ALDAV--------PADARAAPDPGLKALIEGVELTERSL 124
>sp|A6WVA7|GRPE_OCHA4 Protein GrpE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=grpE PE=3 SV=1
Length = 228
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR+ AEMEN++ RT R+ ++++ +A+ NFA+ +L V+DNL
Sbjct: 61 RIAMLEADNGELK---DQLLRAAAEMENLRKRTQRDVQDARTYAVTNFARDMLSVSDNLR 117
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L D S LKSL +GVEMTE+ + H L PE
Sbjct: 118 RALDAIPADALATDAS---------LKSLADGVEMTERAM-----LQALERHGVKKLEPE 163
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 164 GEKFDPNFHQAMF 176
>sp|A5VNA6|GRPE_BRUO2 Protein GrpE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=grpE PE=3 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL
Sbjct: 61 RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L+ D + LKSL EGVEMTE+ + H L PE
Sbjct: 118 RALDTIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 164 GQKFDPNFHQAMF 176
>sp|Q8YEV0|GRPE_BRUME Protein GrpE OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=grpE PE=3 SV=2
Length = 226
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL
Sbjct: 57 RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 113
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L+ D + LKSL EGVEMTE+ + H L PE
Sbjct: 114 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 159
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 160 GQKFDPNFHQAMF 172
>sp|B0CJ30|GRPE_BRUSI Protein GrpE OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=grpE PE=3 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL
Sbjct: 61 RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L+ D + LKSL EGVEMTE+ + H L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 164 GQKFDPNFHQAMF 176
>sp|Q8G2Y6|GRPE_BRUSU Protein GrpE OS=Brucella suis biovar 1 (strain 1330) GN=grpE PE=3
SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL
Sbjct: 61 RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L+ D + LKSL EGVEMTE+ + H L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 164 GQKFDPNFHQAMF 176
>sp|A9M7B6|GRPE_BRUC2 Protein GrpE OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=grpE PE=3 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
R +L A N E+K D++LR AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL
Sbjct: 61 RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117
Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
RA + + L+ D + LKSL EGVEMTE+ + H L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163
Query: 304 -HLYEPGCYGSMF 315
++P + +MF
Sbjct: 164 GQKFDPNFHQAMF 176
>sp|Q6NCY6|GRPE_RHOPA Protein GrpE OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=grpE PE=3 SV=2
Length = 207
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E +DK+LR+ AEMEN++ RT +E +++ + + +FA+ +LD+ADNL RA V
Sbjct: 44 EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P++ A A P LK+L+EGVE+TE+ L
Sbjct: 100 ----PADARANAEPGLKALIEGVELTERSL 125
>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE
PE=3 SV=1
Length = 207
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E +DK+LR+ AEMEN++ RT +E +++ + + +FA+ +LD+ADNL RA V
Sbjct: 44 EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P+ A A P LK+L+EGVE+TE+ L
Sbjct: 100 ----PAEARANAEPGLKALIEGVELTERSL 125
>sp|A4YJR1|GRPE_BRASO Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3
SV=1
Length = 206
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 8/85 (9%)
Query: 199 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 258
+DK+LR+ AEMEN++ RT RE +++ + I FA+ +LD+ADNL RA V P
Sbjct: 48 RDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--------P 99
Query: 259 SNDTAGAVPLLKSLLEGVEMTEKQL 283
+ A A LKSL+EGVE+TE+ L
Sbjct: 100 AETRANADAGLKSLIEGVELTERSL 124
>sp|Q07US4|GRPE_RHOP5 Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE
PE=3 SV=1
Length = 207
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L+AK E + +DK+LR+ AEMEN++ RT RE +++ + + FA+ +L++ADNL RA
Sbjct: 39 LLAK--EAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALD 96
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
V P+ A A P LK+L++GVE+TE+ L
Sbjct: 97 AV--------PAEARANAEPGLKALIDGVELTERSL 124
>sp|A7HZ43|GRPE_PARL1 Protein GrpE OS=Parvibaculum lavamentivorans (strain DS-1 / DSM
13023 / NCIMB 13966) GN=grpE PE=3 SV=1
Length = 213
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 75/124 (60%), Gaps = 15/124 (12%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E+ +++++LR+ A+MEN + R RE ++++++A NFA+ +L+V+DNL RA + +KE
Sbjct: 52 EISDLRNRLLRAAADMENNRKRAEREKQDAQRYAAANFARDMLEVSDNLRRAIATLKE-- 109
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE--HLYEPGCY 311
++ A A +K+++EGVEMT++QL F H + P+ ++P +
Sbjct: 110 ------DERAEAAESVKAMIEGVEMTDRQL-----VTIFERHGIREITPQPGERFDPNLH 158
Query: 312 GSMF 315
+MF
Sbjct: 159 EAMF 162
>sp|Q98GQ5|GRPE_RHILO Protein GrpE OS=Rhizobium loti (strain MAFF303099) GN=grpE PE=3
SV=1
Length = 210
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 25/140 (17%)
Query: 177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALL 236
LV+LLKE EEL +D+ LR AEMEN++ RT R+ +++ +A+ NFA+ +L
Sbjct: 35 LVRLLKENEEL-----------KDRALRVAAEMENLRRRTARDVHDARTYAVANFARDML 83
Query: 237 DVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHV 296
V+DNL RA + P+ A K+L+EGV++TE+ + H
Sbjct: 84 SVSDNLRRALDAI--------PAEAKASGDAGFKALIEGVDLTERAM-----LSALERHG 130
Query: 297 SASLPPE-HLYEPGCYGSMF 315
L PE ++P + +MF
Sbjct: 131 VKKLAPEGEKFDPNFHQAMF 150
>sp|Q6G563|GRPE_BARHE Protein GrpE OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=grpE PE=3 SV=1
Length = 220
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 15/129 (11%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L A +E K+++D++LR A+MEN++ RT R+ ++K ++I NFA+ +L V+DNL RA
Sbjct: 57 LAALQDENKELKDQLLRLAADMENLRRRTARDVADAKAYSIANFARDMLSVSDNLNRALD 116
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLY 306
+ E ND LK+L EGVEMTE+ + H + PE +
Sbjct: 117 AIPEGA----KENDAG-----LKTLAEGVEMTERAM-----IAALERHGVQKIHPEGQKF 162
Query: 307 EPGCYGSMF 315
+P + +MF
Sbjct: 163 DPHFHQAMF 171
>sp|B8IJD7|GRPE_METNO Protein GrpE OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=grpE PE=3 SV=1
Length = 226
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 198 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID 257
+++K+LR+ A+MEN++ RT RE +++ +A+ NFA+ +L+VADN+ RA V
Sbjct: 50 LKNKLLRALADMENLRRRTEREVADARTYAVTNFARDMLNVADNVRRALDSV-------- 101
Query: 258 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMF 315
P D A A LK+LL+G+E+T + L + + V A P ++P + +MF
Sbjct: 102 PVEDRAAADGALKALLDGIELTGRDLAKTLERHG----VRAVEPQGQRFDPNLHQAMF 155
>sp|Q6G1E4|GRPE_BARQU Protein GrpE OS=Bartonella quintana (strain Toulouse) GN=grpE PE=3
SV=1
Length = 220
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 15/129 (11%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L A +E K+++D++LR A+MEN++ RT R+ ++K ++I NFA+ +L V+DNL RA
Sbjct: 57 LAALQDENKELKDQLLRLVADMENLRRRTARDVADAKAYSIANFARDMLSVSDNLNRALE 116
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLY 306
+ E + D AG LK+L EGVEMTE+ + H + PE +
Sbjct: 117 AIPEGAKEND-----AG----LKTLAEGVEMTERAM-----IAALERHGVQKIYPEGQKF 162
Query: 307 EPGCYGSMF 315
+P + +MF
Sbjct: 163 DPHFHQAMF 171
>sp|A1UUC9|GRPE_BARBK Protein GrpE OS=Bartonella bacilliformis (strain ATCC 35685 /
KC583) GN=grpE PE=3 SV=1
Length = 222
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 15/134 (11%)
Query: 183 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 242
E +LL +E K+++D+ LR A+MEN++ RTIR+ ++K ++I NFA+ +L V+DNL
Sbjct: 54 ESTDLLATLQDENKELKDQFLRLAADMENLRRRTIRDVADAKIYSIANFARDMLSVSDNL 113
Query: 243 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP 302
RA + + + D + LK L EGVEMTE+ + H + P
Sbjct: 114 NRALEAIPADARESDTN---------LKMLAEGVEMTERAM-----MAALEHHGVKKICP 159
Query: 303 E-HLYEPGCYGSMF 315
E ++P + +MF
Sbjct: 160 EGQKFDPNFHQAMF 173
>sp|A9ILE9|GRPE_BART1 Protein GrpE OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=grpE PE=3 SV=1
Length = 222
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 15/129 (11%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L + +E K++++++LR A+MEN++ RT R+ +++ ++I NFA+ +L V+DNL RA
Sbjct: 56 LASLQDENKELKNQLLRLAADMENLRRRTARDVADARAYSIANFARDMLSVSDNLNRALE 115
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLY 306
+ E + D AG LKSL EGVEMTE+ + H + PE +
Sbjct: 116 AIPEGARESD-----AG----LKSLAEGVEMTERAM-----MAALERHGVQKIHPEGQKF 161
Query: 307 EPGCYGSMF 315
+P + +MF
Sbjct: 162 DPHFHQAMF 170
>sp|Q9P5U4|GRPE_NEUCR GrpE protein homolog, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=mge-1 PE=3 SV=1
Length = 238
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 158 AFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTI 217
A + +D +E + D V LK++ L AK+ E ++ +DK LR+ A+ N+++RT
Sbjct: 53 AEGEKKADEGAEQKEGETDEVAALKKQ---LEAKDAEAREWKDKCLRTVADFRNLQERTA 109
Query: 218 REAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVE 277
R+ + +K FAIQ FAK L++ DN RA SVV ++ LK S + + + L +L EG++
Sbjct: 110 RDVKQAKDFAIQKFAKDLVESVDNFERALSVVPQDKLK---SEEQSEHLKDLVNLYEGLK 166
Query: 278 MTEKQL 283
MTE L
Sbjct: 167 MTESIL 172
>sp|Q13E58|GRPE_RHOPS Protein GrpE OS=Rhodopseudomonas palustris (strain BisB5) GN=grpE
PE=3 SV=1
Length = 206
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E + +DK+LR+ AEMEN++ RT +E +++ + + FA+ +L++ADNL RA V
Sbjct: 43 EAAEARDKMLRTLAEMENLRRRTAKEVADARTYGVSAFARDVLEIADNLQRALDAV---- 98
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P+ A A LK L+EGVE+TE+ L
Sbjct: 99 ----PAEARANADAGLKGLIEGVELTERSL 124
>sp|Q2J322|GRPE_RHOP2 Protein GrpE OS=Rhodopseudomonas palustris (strain HaA2) GN=grpE
PE=3 SV=1
Length = 206
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 8/91 (8%)
Query: 193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
+E + +DK+LR+ AEMEN++ RT +E +++ + + FA+ +L++ADNL RA V
Sbjct: 43 KEAAEARDKMLRTLAEMENLRRRTQKEVADARTYGVSAFARDVLEIADNLQRALDAV--- 99
Query: 253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P+ A A LK L+EGVE+TE+ L
Sbjct: 100 -----PAEARANADAGLKGLIEGVELTERSL 125
>sp|P0CAV1|GRPE_CAUCR Protein GrpE OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=grpE PE=3 SV=1
Length = 208
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E+ Q++++ LR AE EN K R RE +++ +AIQ FA+ LL ADNLGRA++
Sbjct: 28 EVAQLKEQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATA------ 81
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P + T P +K+ + GVEMTEK+L
Sbjct: 82 --HSPKDSTD---PAVKNFIIGVEMTEKEL 106
>sp|B8GXP4|GRPE_CAUCN Protein GrpE OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=grpE PE=3 SV=1
Length = 208
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E+ Q++++ LR AE EN K R RE +++ +AIQ FA+ LL ADNLGRA++
Sbjct: 28 EVAQLKEQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATA------ 81
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
P + T P +K+ + GVEMTEK+L
Sbjct: 82 --HSPKDSTD---PAVKNFIIGVEMTEKEL 106
>sp|Q79V15|GRPE_BRAJA Protein GrpE OS=Bradyrhizobium japonicum (strain USDA 110) GN=grpE
PE=3 SV=1
Length = 201
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 8/92 (8%)
Query: 192 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 251
+E + +D++LR+ AEMEN++ RT +E +++ + I FA+ +LD+ADNL RA
Sbjct: 39 QKEAAEARDRMLRTLAEMENLRKRTTKEVADARLYGITGFARDVLDIADNLQRA------ 92
Query: 252 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
L P+ A A P L SL+EGVE+TE+ L
Sbjct: 93 --LDAVPAEARAAADPGLTSLIEGVELTERSL 122
>sp|Q11B39|GRPE_MESSB Protein GrpE OS=Mesorhizobium sp. (strain BNC1) GN=grpE PE=3 SV=1
Length = 222
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 185 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 244
E++L+ +E + ++++ LR AEMEN++ RT R+ +++ + I NFA+ +L V+DNL R
Sbjct: 46 EDVLLRLAKENEDLKERALRLTAEMENLRKRTQRDVADARVYGIANFARDMLTVSDNLQR 105
Query: 245 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
A V E A A LK+L+EGVEMTE+ +
Sbjct: 106 ALQAVSEEA--------RAQADSGLKALVEGVEMTERAM 136
>sp|Q68WA8|GRPE_RICTY Protein GrpE OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=grpE PE=3 SV=1
Length = 178
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 25/133 (18%)
Query: 185 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 244
EE+ + K E+K++QDK++R+ AE++N + R + + +K +AI FAK LL+V+DNL R
Sbjct: 26 EEIALLK-AEIKELQDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSR 84
Query: 245 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEH 304
A L PSN + +++ GV+MT+ +L ++ F H + PE
Sbjct: 85 A--------LAHKPSNADVE----VTNIISGVQMTKDELDKI-----FHKHHIEEIKPE- 126
Query: 305 LYEPGCYGSMFNH 317
GSMF++
Sbjct: 127 ------IGSMFDY 133
>sp|P63188|GRPE_RHIRD Protein GrpE OS=Rhizobium radiobacter GN=grpE PE=3 SV=1
Length = 211
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 18/125 (14%)
Query: 159 FSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 218
F D E + E + D V+LLK A+N +++ DK LR AEM+N++ RT R
Sbjct: 18 FVDPAQAGEEQAETAEPDPVELLK-------AENADLR---DKFLRLAAEMDNLRRRTER 67
Query: 219 EAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEM 278
+ +++K +++ FA+ +L V+DNL RA + + +N AG L L+EGVEM
Sbjct: 68 DVKDAKAYSLAGFARDMLAVSDNLRRALEAIPDEL----KTNGEAG----LNGLIEGVEM 119
Query: 279 TEKQL 283
TE+ +
Sbjct: 120 TERSM 124
>sp|P63187|GRPE_AGRT5 Protein GrpE OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=grpE PE=3 SV=1
Length = 211
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 18/125 (14%)
Query: 159 FSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 218
F D E + E + D V+LLK A+N +++ DK LR AEM+N++ RT R
Sbjct: 18 FVDPAQAGEEQAETAEPDPVELLK-------AENADLR---DKFLRLAAEMDNLRRRTER 67
Query: 219 EAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEM 278
+ +++K +++ FA+ +L V+DNL RA + + +N AG L L+EGVEM
Sbjct: 68 DVKDAKAYSLAGFARDMLAVSDNLRRALEAIPDEL----KTNGEAG----LNGLIEGVEM 119
Query: 279 TEKQL 283
TE+ +
Sbjct: 120 TERSM 124
>sp|B9JZG5|GRPE_AGRVS Protein GrpE OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=grpE PE=3 SV=1
Length = 204
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L A+N E++ D+ LR AEM+N++ RT R+ +++K +A+ FA+ +L V+DNL RA
Sbjct: 43 LQAENAELR---DRFLRLAAEMDNLRRRTERDVKDAKSYAVTAFARDMLAVSDNLRRAID 99
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLY 306
V P+ A L +L+EGVEMTE+ + H + PE +
Sbjct: 100 AV--------PAEAKEEAQAGLTALIEGVEMTERAM-----LSTLERHGVRKIEPEGQKF 146
Query: 307 EPGCYGSMF 315
+P + +MF
Sbjct: 147 DPNFHQAMF 155
>sp|B5ZMX0|GRPE_RHILW Protein GrpE OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=grpE PE=3 SV=1
Length = 210
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
ELL A+N E++ D+ LR AEM+N++ RT RE +++K +++ FA+ +L V+DNL RA
Sbjct: 41 ELLKAENGELR---DRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRA 97
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP-EH 304
+ P+ A L +L+EGVEMTE+ + H L P
Sbjct: 98 LDAI--------PAEVKDAADAGLSTLIEGVEMTERAM-----LSALERHGVRKLEPVGQ 144
Query: 305 LYEPGCYGSMF 315
++P + +MF
Sbjct: 145 KFDPNFHQAMF 155
>sp|C3LTA4|GRPE_VIBCM Protein GrpE OS=Vibrio cholerae serotype O1 (strain M66-2) GN=grpE
PE=3 SV=1
Length = 200
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L+ E +K+ QD VLR+ AE+EN++ R+ +E + ++KFA+ FA+ LL V DNL RA
Sbjct: 54 LLVSEERVKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERAIQ 113
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
G V +K LLEGVE+T K
Sbjct: 114 AAD-------------GEVEAIKPLLEGVELTHK 134
>sp|O30862|GRPE_VIBCH Protein GrpE OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=grpE PE=3 SV=2
Length = 200
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L+ E +K+ QD VLR+ AE+EN++ R+ +E + ++KFA+ FA+ LL V DNL RA
Sbjct: 54 LLVSEERVKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERAIQ 113
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
G V +K LLEGVE+T K
Sbjct: 114 AAD-------------GEVEAIKPLLEGVELTHK 134
>sp|A5F369|GRPE_VIBC3 Protein GrpE OS=Vibrio cholerae serotype O1 (strain ATCC 39541 /
Ogawa 395 / O395) GN=grpE PE=3 SV=1
Length = 200
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 247
L+ E +K+ QD VLR+ AE+EN++ R+ +E + ++KFA+ FA+ LL V DNL RA
Sbjct: 54 LLVSEERVKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERAIQ 113
Query: 248 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
G V +K LLEGVE+T K
Sbjct: 114 AAD-------------GEVEAIKPLLEGVELTHK 134
>sp|A6U5E2|GRPE_SINMW Protein GrpE OS=Sinorhizobium medicae (strain WSM419) GN=grpE PE=3
SV=1
Length = 208
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
EL A+N E++ DK LR AEM+N++ RT R+ +++K +++ FA+ +L V+DNL RA
Sbjct: 43 ELAKAENAELR---DKYLRLAAEMDNLRRRTERDVKDAKSYSVAGFARDMLAVSDNLRRA 99
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-H 304
+ P++ LK+L+EGVEMTE+ + H L P
Sbjct: 100 LDAI--------PADAREAGDAGLKALIEGVEMTERSM-----LAALERHGVKQLDPTGQ 146
Query: 305 LYEPGCYGSMF 315
++P + +MF
Sbjct: 147 KFDPNFHQAMF 157
>sp|B6JCI1|GRPE_OLICO Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 /
DSM 1227 / OM5) GN=grpE PE=3 SV=1
Length = 200
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 8/90 (8%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E + +D++LR+ AEMEN++ RT RE +++ + I FA+ +L++ADNL RA
Sbjct: 48 EAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRA-------- 99
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
L P+ A A P L +L+EGVE+TE+ L
Sbjct: 100 LDAVPAEARAAADPGLTALIEGVELTERSL 129
>sp|B3PZA4|GRPE_RHIE6 Protein GrpE OS=Rhizobium etli (strain CIAT 652) GN=grpE PE=3 SV=1
Length = 210
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
ELL A+N E++ D+ LR AEM+N++ RT RE +++K +++ FA+ +L V+DNL RA
Sbjct: 41 ELLKAENSELR---DRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRA 97
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP-EH 304
+ + TA A L SL+EGVEMTE+ + H L P
Sbjct: 98 LDAISPE------AKATADAG--LTSLIEGVEMTERAM-----LSALERHGVRKLEPVGQ 144
Query: 305 LYEPGCYGSMF 315
++P + +MF
Sbjct: 145 KFDPNFHQAMF 155
>sp|B8ET77|GRPE_METSB Protein GrpE OS=Methylocella silvestris (strain BL2 / DSM 15510 /
NCIMB 13906) GN=grpE PE=3 SV=1
Length = 187
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 61/96 (63%), Gaps = 11/96 (11%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
E L A+N +K DK+LR+ A+MEN++ RT +E ++K + + +FA+ +L ADNL RA
Sbjct: 32 ENLQAENTSLK---DKLLRTLADMENLRRRTEKEVADAKTYGVTSFARDMLTFADNLHRA 88
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
+ V P+ A A P +++L+EG+++TE+
Sbjct: 89 LANV--------PAEARAKAEPAVQTLIEGLQLTER 116
>sp|Q8DF59|GRPE_VIBVU Protein GrpE OS=Vibrio vulnificus (strain CMCP6) GN=grpE PE=3 SV=1
Length = 183
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 164 SDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENS 223
+D++ E D+ + E E L+A +K+ QD VLR+ AE+EN++ RT +E + +
Sbjct: 28 TDADIEWNEEADESAAKIAELEAALLASEARVKEQQDSVLRAKAEVENMRRRTEQEIDKA 87
Query: 224 KKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
+K+A+ FA+ LL V DNL RA I ++ + AV K LLEGVE+T K
Sbjct: 88 RKYALNRFAEELLPVIDNLERA----------IQAADAESEAV---KPLLEGVELTHKTF 134
Query: 284 GEV 286
+V
Sbjct: 135 VDV 137
>sp|Q7MN92|GRPE_VIBVY Protein GrpE OS=Vibrio vulnificus (strain YJ016) GN=grpE PE=3 SV=1
Length = 198
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 164 SDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENS 223
+D++ E D+ + E E L+A +K+ QD VLR+ AE+EN++ RT +E + +
Sbjct: 28 TDADIEWNEEADESAVKIAELEAALLASEARVKEQQDSVLRAKAEVENMRRRTEQEIDKA 87
Query: 224 KKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
+K+A+ FA+ LL V DNL RA I ++ + AV K LLEGVE+T K
Sbjct: 88 RKYALNRFAEELLPVIDNLERA----------IQAADAESEAV---KPLLEGVELTHKTF 134
Query: 284 GEV 286
+V
Sbjct: 135 VDV 137
>sp|Q92SK0|GRPE_RHIME Protein GrpE OS=Rhizobium meliloti (strain 1021) GN=grpE PE=3 SV=1
Length = 208
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E +++DK LR AEM+N++ RT R+ +++K +++ FA+ +L V+DNL RA +
Sbjct: 48 ESAELRDKYLRLAAEMDNLRRRTERDVKDAKSYSVAGFARDMLAVSDNLRRALDAI---- 103
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLYEPGCYG 312
P++ LK+L+EGVEMTE+ + H L P ++P +
Sbjct: 104 ----PADAREAGDAGLKALIEGVEMTERSM-----LAALERHGVKQLDPTGQKFDPNFHQ 154
Query: 313 SMF 315
+MF
Sbjct: 155 AMF 157
>sp|Q2KD99|GRPE_RHIEC Protein GrpE OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=grpE
PE=3 SV=1
Length = 211
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
ELL A+N E++ D+ LR AEM+N++ RT RE +++K +++ FA+ +L V+DNL RA
Sbjct: 42 ELLKAENAELR---DRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRA 98
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP-EH 304
+ + TA A L +L+EGVEMTE+ + H L P
Sbjct: 99 LDAISPE------AKATADAG--LTTLIEGVEMTERSM-----LSALERHGVRKLEPVGQ 145
Query: 305 LYEPGCYGSMF 315
++P + +MF
Sbjct: 146 KFDPNFHQAMF 156
>sp|Q1MMC9|GRPE_RHIL3 Protein GrpE OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=grpE PE=3 SV=1
Length = 210
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
ELL A+N E++ D+ LR AEM+N++ RT RE +++K +++ FA+ +L V+DNL RA
Sbjct: 41 ELLKAENGELR---DRYLRLAAEMDNLRRRTEREVKDAKSYSVAGFARDMLAVSDNLRRA 97
Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP-EH 304
I P A A L +L+EGVEMTE+ + H L P
Sbjct: 98 LDA-------ISPET-KATADAGLSTLIEGVEMTERAM-----LSALERHGVRKLEPVGQ 144
Query: 305 LYEPGCYGSMF 315
++P + +MF
Sbjct: 145 KFDPNFHQAMF 155
>sp|Q6LUA8|GRPE_PHOPR Protein GrpE OS=Photobacterium profundum GN=grpE PE=3 SV=1
Length = 206
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 152 RVSKQTAFSDSDSDSESE-IELSRDDL-VKLLKEREELLMAKNEEMKQMQDKVLRSFAEM 209
++ K+T + +E E +E++ +++ + + E E L++ + ++K+ QD VLR+ AE
Sbjct: 12 QLQKETVEAAETVSAEEEFVEITAEEMQIARIAELEAALLSSDAKVKEAQDNVLRARAEG 71
Query: 210 ENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLL 269
ENV+ R+ E + ++KFA+ F + LL V DNL RA ++ ND A L
Sbjct: 72 ENVRRRSEVEIDKARKFALNKFTEELLPVIDNLERA--------IETADKNDEA-----L 118
Query: 270 KSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSM 314
KS++EGVE+T K + + H P ++ P + +M
Sbjct: 119 KSMIEGVELTLKTMTATVEKFGLKQHN----PVGEVFNPEFHQAM 159
>sp|Q18421|GRPE_CAEEL GrpE protein homolog, mitochondrial OS=Caenorhabditis elegans
GN=C34C12.8 PE=1 SV=1
Length = 237
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
LLKE ++L E +DK RS AE ENV+ R I++ +++K FAIQ+F K LL+V+
Sbjct: 79 LLKEYDDL----QAESLDFKDKYQRSLAETENVRRRGIKQTDDAKVFAIQSFCKDLLEVS 134
Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSAS 299
D L A VK P + +G LK L EGV MT + + F H +
Sbjct: 135 DILDIAVKSVK-------PEDLESGG-KALKDLFEGVSMTRTVMAK-----TFAKHGLVT 181
Query: 300 L-PPEHLYEPGCYGSMFN 316
+ P ++P + ++F
Sbjct: 182 VDPTNEKFDPNLHEAVFQ 199
>sp|B0T367|GRPE_CAUSK Protein GrpE OS=Caulobacter sp. (strain K31) GN=grpE PE=3 SV=1
Length = 205
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
E+ ++D+ LR AE EN K R RE+ +++ +AIQ FA+ LL ADNL RA+++ +
Sbjct: 28 EVAALKDQALRYAAEAENTKRRAERESNDARAYAIQKFARDLLGAADNLSRATAMSPRD- 86
Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
S D P + + + GVEMTEK+L
Sbjct: 87 -----SQD-----PAVTNYIIGVEMTEKEL 106
>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus
GN=Grpel1 PE=1 SV=2
Length = 217
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
LL+E+ +L E++K+ +K R+ A+ EN++ R+ + E +K + IQ F K LL+VA
Sbjct: 60 LLEEKVKL----EEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVA 115
Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
D L +A+ V P + + P LKSL EG+ MTE Q+ +V
Sbjct: 116 DILEKATQSV--------PKEEVSNNNPHLKSLYEGLVMTEVQIQKV 154
>sp|A8EY32|GRPE_RICCK Protein GrpE OS=Rickettsia canadensis (strain McKiel) GN=grpE PE=3
SV=1
Length = 179
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 29/137 (21%)
Query: 183 EREEL--LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 240
+REEL L A+ EE+K DK++R+ AE++N + R + + +K +AI FAK LL+V+D
Sbjct: 21 DREELTELKAQIEELK---DKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSD 77
Query: 241 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASL 300
NL RA L P+ + +++EGV+MT+ +L ++ F H +
Sbjct: 78 NLARA--------LAHTPAKLDVEVI----NIIEGVQMTKDELDKI-----FHKHHIEEI 120
Query: 301 PPEHLYEPGCYGSMFNH 317
PE GSMF++
Sbjct: 121 KPE-------IGSMFDY 130
>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1
PE=1 SV=1
Length = 217
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
LL+E+ +L E++++ +K R+ A+ EN++ R+ + E +K + IQ F K LL+VA
Sbjct: 60 LLEEKAKL----EEQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVA 115
Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
D L +A+ V P + + P LKSL EG+ MTE Q+ +V
Sbjct: 116 DILEKATQSV--------PKEEISNNNPHLKSLYEGLVMTEVQIQKV 154
>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster
GN=Roe1 PE=2 SV=2
Length = 213
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDV 238
KL KE L A E+ ++ DK RS A+ EN+++R ++ ++K F IQ+F K LL+V
Sbjct: 57 KLTKE----LAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEV 112
Query: 239 ADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSA 298
AD LG A+ V P + +G LK+L EG+ MT L +V F H
Sbjct: 113 ADTLGHATQAV--------PKDKLSGNAD-LKNLYEGLTMTRASLLQV-----FKRHGLE 158
Query: 299 SLPP-EHLYEPGCYGSMF 315
L P ++P + ++F
Sbjct: 159 PLDPINQKFDPNQHEALF 176
>sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=Bos taurus GN=GRPEL1 PE=1
SV=1
Length = 217
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
E++K+ +K R+ A+ EN++ R+ + E +K + IQ F K LL+VAD L +A+ V
Sbjct: 69 EQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQCV--- 125
Query: 253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
P + P LKSL EG+ MTE Q+ +V
Sbjct: 126 -----PQEEIRDDNPHLKSLYEGLVMTEVQIQKV 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,845,602
Number of Sequences: 539616
Number of extensions: 4810451
Number of successful extensions: 30068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 802
Number of HSP's that attempted gapping in prelim test: 22777
Number of HSP's gapped (non-prelim): 5846
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)