BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020621
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 278 bits (712), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 194/320 (60%), Gaps = 5/320 (1%)
Query: 1 MIDINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60
M I H+ V NG+ MH+AE G+GP +L IHGFPELW W++Q+ +LAE GY VAPD+R
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GYGDSDSP--QDPESYTIFHXX--XXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPD 116
GYGD+ DP ++I H + FVV HDWGA IAW+LCLFRPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 117 RVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKL 176
+VKALVNL V + R+P++ E +YGE YIS+FQ PG E F+ + +VLKK+
Sbjct: 128 KVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKI 187
Query: 177 LLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
L P P G + P +L W++ E+L +A KF TGFTGA+NYYRA+
Sbjct: 188 LTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPI 247
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDL-EVVVIRDAQH 295
NWELTAPW GA++ VPTKFI+G+ + + G + YI FK VP L EVVV+ A H
Sbjct: 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAH 307
Query: 296 YIQLEKAEQITEEILSHFRK 315
++ E+ +I++ I +K
Sbjct: 308 FVSQERPHEISKHIYDFIQK 327
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 277 bits (708), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/320 (45%), Positives = 194/320 (60%), Gaps = 5/320 (1%)
Query: 1 MIDINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60
M I H+ V NG+ MH+AE G+GP +L IHGFPELW W++Q+ +LAE GY VAPD+R
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GYGDSDSP--QDPESYTIFHXX--XXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPD 116
GYGD+ DP ++I H + FVV HDWGA IAW+LCLFRPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 117 RVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKL 176
+VKALVNL V + R+P++ E ++GE YIS+FQ PG E F+ + +VLKK+
Sbjct: 128 KVKALVNLSVHFSKRNPKMNVVEGLKAIFGEDHYISRFQVPGEIEAEFAPIGAKSVLKKI 187
Query: 177 LLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
L P P G + P +L W++ E+L +A KF TGFTGA+NYYRA+
Sbjct: 188 LTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPI 247
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDL-EVVVIRDAQH 295
NWELTAPW GA++ VPTKFI+G+ + + G + YI FK VP L EVVV+ A H
Sbjct: 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAH 307
Query: 296 YIQLEKAEQITEEILSHFRK 315
++ E+ +I++ I +K
Sbjct: 308 FVSQERPHEISKHIYDFIQK 327
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 158/311 (50%), Gaps = 15/311 (4%)
Query: 3 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
D++H V GI +H E G GP + L HGFPE W W+YQI LA+ G+ V+A DM+G
Sbjct: 234 DVSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKG 293
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YGDS SP + E Y + QA +GHDW + WN+ LF P+RV+A+
Sbjct: 294 YGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAV 353
Query: 122 VNLGVAYMPRSPELKPTEIF--FKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLV 179
+L +MP P++ P ++ ++ LY FQEPGVAE K S T
Sbjct: 354 ASLNTPFMPPDPDVSPMKVIRSIPVFNYQLY---FQEPGVAEAELEKNMSRTFKSFFRAS 410
Query: 180 NAPDIIAAPAGVEIIDFL-HTPS--SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
+ IA EI L +TP +L + E+++ + ++F TGF G LN+YR ++
Sbjct: 411 DETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTER 470
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHY 296
NW+ + G KI VP + +K + + ++N K +P L+ I D H+
Sbjct: 471 NWKWSCKGLGRKILVPALMVTAEKDIVLRPEMSKNMEK------WIPFLKRGHIEDCGHW 524
Query: 297 IQLEKAEQITE 307
Q+EK ++ +
Sbjct: 525 TQIEKPTEVNQ 535
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 16/311 (5%)
Query: 3 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
D++H V + +H E G GP V L HGFPE W W+YQI LA+ GY V+A DM+G
Sbjct: 236 DMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKG 295
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YG+S +P + E Y + QA +GHDWG + W + LF P+RV+A+
Sbjct: 296 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAV 355
Query: 122 VNLGVAYMPRSPELKPTEIFFK--LYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLV 179
+L ++P +P + P E ++ LY FQEPGVAE + S T K L
Sbjct: 356 ASLNTPFIPANPNMSPLESIKANPVFDYQLY---FQEPGVAEAELEQNLSRT-FKSLFRA 411
Query: 180 NAPDIIAAPAGVEIID-FLHTPS--SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
+ +++ E F+++P SL V E++Q + ++F +GF G LN+YR M++
Sbjct: 412 SDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 471
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHY 296
NW+ G KI +P + +K +++ + +P L+ I D H+
Sbjct: 472 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQH------MEDWIPHLKRGHIEDCGHW 525
Query: 297 IQLEKAEQITE 307
Q++K ++ +
Sbjct: 526 TQMDKPTEVNQ 536
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 16/314 (5%)
Query: 3 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
D++H V + +H E G GP V L HGFPE W W+YQI LA+ GY V+A DM+G
Sbjct: 17 DMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKG 76
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YG+S +P + E Y + QA +GHDWG + W + LF P+RV+A+
Sbjct: 77 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAV 136
Query: 122 VNLGVAYMPRSPELKPTEIFFK--LYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLV 179
+L ++P +P + P E ++ LY FQEPGVAE + S T K L
Sbjct: 137 ASLNTPFIPANPNMSPLESIKANPVFDYQLY---FQEPGVAEAELEQNLSRT-FKSLFRA 192
Query: 180 NAPDIIAAPAGVEIID-FLHTPS--SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
+ +++ E F+++P SL V E++Q + ++F +GF G LN+YR M++
Sbjct: 193 SDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 252
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHY 296
NW+ G KI +P + +K +++ + +P L+ I D H+
Sbjct: 253 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQH------MEDWIPHLKRGHIEDCGHW 306
Query: 297 IQLEKAEQITEEIL 310
Q++K ++ + ++
Sbjct: 307 TQMDKPTEVNQILI 320
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 16/314 (5%)
Query: 3 DINHRRVHTN-GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
D++H V + +H E G GP V L HGFPE W W+YQI LA+ GY V+A DM+G
Sbjct: 32 DMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKG 91
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YG+S +P + E Y + QA +GHDWG + W + LF P+RV+A+
Sbjct: 92 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAV 151
Query: 122 VNLGVAYMPRSPELKPTEIFFK--LYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLV 179
+L ++P +P + P E ++ LY FQEPGVAE + S T K L
Sbjct: 152 ASLNTPFIPANPNMSPLESIKANPVFDYQLY---FQEPGVAEAELEQNLSRT-FKSLFRA 207
Query: 180 NAPDIIAAPAGVEIID-FLHTPS--SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236
+ +++ E F+++P SL V E++Q + ++F +GF G LN+YR M++
Sbjct: 208 SDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 267
Query: 237 NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHY 296
NW+ G KI +P + +K +++ + +P L+ I D H+
Sbjct: 268 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQH------MEDWIPHLKRGHIEDCGHW 321
Query: 297 IQLEKAEQITEEIL 310
Q++K ++ + ++
Sbjct: 322 TQMDKPTEVNQILI 335
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 154/350 (44%), Gaps = 51/350 (14%)
Query: 6 HRRVHTNGIWMHIAEKG----QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
HR ++ G +H QGPLV+L+HGFPE W W++QI LA GY VVA D RG
Sbjct: 11 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 70
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YG S + ++Y I QAFVVGHDWGA +AW PDR +
Sbjct: 71 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGV 130
Query: 122 VNL-------GVAYMPRSP--ELKPTEIFFKLYGEGLY------------ISQFQE---- 156
V + GV +P SP E +P++ +L G G I++ +E
Sbjct: 131 VGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRG 190
Query: 157 -----------PGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAP----AGVEIIDFLHTPS 201
G+ + + D+ L+ + ++ I A P G + D P
Sbjct: 191 WLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDV--IRAGPLCMAEGARLKDAFVYPE 248
Query: 202 SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKH 261
++P W DL + +F +GF G L++Y +D +W A QG + P FI G
Sbjct: 249 TMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYD 308
Query: 262 MGFKSFGTENYIKGDEFKTLVPDLEVV-VIRDAQHYIQLEKAEQITEEIL 310
+G +G + + E ++P+ +I D H+IQ E E+ +L
Sbjct: 309 VG-TIWGAQAIERAHE---VMPNYRGTHMIADVGHWIQQEAPEETNRLLL 354
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 154/350 (44%), Gaps = 51/350 (14%)
Query: 6 HRRVHTNGIWMHIAEKG----QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61
HR ++ G +H QGPLV+L+HGFPE W W++QI LA GY VVA D RG
Sbjct: 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 64
Query: 62 YGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121
YG S + ++Y I QAFVVGHDWGA +AW PDR +
Sbjct: 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGV 124
Query: 122 VNL-------GVAYMPRSP--ELKPTEIFFKLYGEGLY------------ISQFQE---- 156
V + GV +P SP E +P++ +L G G I++ +E
Sbjct: 125 VGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRG 184
Query: 157 -----------PGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAP----AGVEIIDFLHTPS 201
G+ + + D+ L+ + ++ I A P G + D P
Sbjct: 185 WLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDV--IRAGPLCMAEGARLKDAFVYPE 242
Query: 202 SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKH 261
++P W DL + +F +GF G L++Y +D +W A QG + P FI G
Sbjct: 243 TMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYD 302
Query: 262 MGFKSFGTENYIKGDEFKTLVPDLEVV-VIRDAQHYIQLEKAEQITEEIL 310
+G +G + + E ++P+ +I D H+IQ E E+ +L
Sbjct: 303 VG-TIWGAQAIERAHE---VMPNYRGTHMIADVGHWIQQEAPEETNRLLL 348
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 3 DINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY 62
D H V + +H +G GP +LL+HG+P W W I LAEH Y V+ PD+RG+
Sbjct: 8 DFKHYEVQLPDVKIHYVREGAGPTLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRGF 66
Query: 63 GDSDSP--QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRV-K 119
GDS+ P D Y++ +A+VVGHD+ A + DRV K
Sbjct: 67 GDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIK 126
Query: 120 ALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVA 160
A + + P P+ P E Y SQF + +A
Sbjct: 127 AAI-----FDPIQPDFGPVYFGLGHVHESWY-SQFHQLDMA 161
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDS- 67
+HT+ + +A KG GP +LL+HG+P+ W LAE Y VV D+RGYG+S +
Sbjct: 16 LHTSAARLRVAVKGSGPPLLLLHGYPQTHLAWHRIAPRLAE-DYSVVLADLRGYGESRAL 74
Query: 68 PQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
++ Y+ + V+GHD GA++ + L L P V A V+L V
Sbjct: 75 DEEGADYSKAALARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFVSLTV 133
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V T +++ + G G +LL+HG+P+ W ++I L + + VVA D+RGYGDS P
Sbjct: 10 VDTTEARINLVKAGHGAPLLLLHGYPQTHVMW-HKIAPLLANNFTVVATDLRGYGDSSRP 68
Query: 69 QDPE---SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
+Y+ Q +VVGHD GA++A L L P RVK L L
Sbjct: 69 ASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLD 128
Query: 126 VA 127
+A
Sbjct: 129 IA 130
>pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2M|B Chain B, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2N|A Chain A, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|B Chain B, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|E Chain E, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|F Chain F, Crystal Structure Of Dbja (Wild Type Type Ii P21)
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 2 IDINHRRVHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59
I+I RR G M E G P+VL +HG P W+ I L H +APD+
Sbjct: 5 IEIEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWR-NILPLVSPVAHCIAPDL 63
Query: 60 RGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S P +Y F A++V DWG +A++L RPD V+
Sbjct: 64 IGFGQSGKPDI--AYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVR 121
Query: 120 ALV 122
L
Sbjct: 122 GLA 124
>pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|A Chain A, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|B Chain B, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|F Chain F, Crystal Structure Of Dbja (His-Dbja)
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 2 IDINHRRVHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59
I+I RR G M E G P+VL +HG P W+ I L H +APD+
Sbjct: 5 IEIEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWR-NILPLVSPVAHCIAPDL 63
Query: 60 RGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S P +Y F A++V DWG +A++L RPD V+
Sbjct: 64 IGFGQSGKPDI--AYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVR 121
Query: 120 ALV 122
L
Sbjct: 122 GLA 124
>pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta)
pdb|3A2L|B Chain B, Crystal Structure Of Dbja (Mutant Dbja Delta)
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 2 IDINHRRVHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59
I+I RR G M E G P+VL +HG P W+ I L H +APD+
Sbjct: 5 IEIEIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWR-NILPLVSPVAHCIAPDL 63
Query: 60 RGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S P +Y F A++V DWG +A++L RPD V+
Sbjct: 64 IGFGQSGKPDI--AYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVR 121
Query: 120 ALV 122
L
Sbjct: 122 GLA 124
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 13/160 (8%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V +G ++ + G G VL HG+P W+YQ+ +L+ GY +A D RG+G SD P
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDW-GAQIAWNLCLFRPDRVKALVNLGV- 126
Y F + +VG G +A + RV LV LG
Sbjct: 64 WTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121
Query: 127 ----AYMPRSPELKPTEIFFKLYGEGL-----YISQFQEP 157
P P+ P ++F + E L +IS F P
Sbjct: 122 TPIFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAP 161
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 247 AKICVPTKFI--IGDKHMGFKSFG--TENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA 302
AKI VPT I GD+ + F++ G IKG E K V +DA H + A
Sbjct: 208 AKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK---------VYKDAPHGFAVTHA 258
Query: 303 EQITEEILSHFRK 315
+Q+ E++L+ ++
Sbjct: 259 QQLNEDLLAFLKR 271
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 13/160 (8%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V +G ++ + G G VL HG+P W+YQ+ +L+ GY +A D RG+G SD P
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDW-GAQIAWNLCLFRPDRVKALVNLGV- 126
Y F + +VG G +A + RV LV LG
Sbjct: 64 WTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121
Query: 127 ----AYMPRSPELKPTEIFFKLYGEGL-----YISQFQEP 157
P P+ P ++F + E L +IS F P
Sbjct: 122 TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAP 161
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 247 AKICVPTKFI--IGDKHMGFKSFG--TENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA 302
AKI VPT I GD+ + F++ G IKG E K V +DA H + A
Sbjct: 208 AKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK---------VYKDAPHGFAVTHA 258
Query: 303 EQITEEILSHFRK 315
+Q+ E++L+ ++
Sbjct: 259 QQLNEDLLAFLKR 271
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
Length = 309
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 7 RRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
R V G + ++G G VL +HG P W+ I ++ GY VAPD+ G GDS
Sbjct: 12 RTVEVEGATIAYVDEGSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDSA 71
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122
P Y + +V HDWG+ I PDRV A+
Sbjct: 72 KPDI--EYRLQDHVAYXDGFIDALGLDDXVLVIHDWGSVIGXRHARLNPDRVAAVA 125
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXX 84
P+VL IHG E W+ LA GY VVAPD+ G+G S + SY+
Sbjct: 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQID 86
Query: 85 XXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122
+VGH GA +A + RP ++K L+
Sbjct: 87 RVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELI 124
>pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
pdb|1Y37|B Chain B, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
Length = 304
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 4 INHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYG 63
R V + ++ G GP +LL+HGFP+ W ++ L + Y VV D+RGYG
Sbjct: 5 FERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWA-RVAPLLANEYTVVCADLRGYG 63
Query: 64 DSDSP---QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKA 120
S P D +Y+ + +VGHD G + + L PD V +
Sbjct: 64 GSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHPDSVLS 123
Query: 121 LVNLGV 126
L L +
Sbjct: 124 LAVLDI 129
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXX 81
G GP +LL+HGFP+ W LAE + V+ D+ GYG SD P+ E +T +
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 82 XXXXXXXXXXX---XQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ GHD GA++++ L L P R+ L L +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXX 81
G GP +LL+HGFP+ W LAE + V+ D+ GYG SD P+ E +T +
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 82 XXXXXXXXXXX---XQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ GHD GA++++ L L P R+ L L +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 11 TNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
+G+ +H + GQGPLV+L+HGF + W W + LA+ + V+APD+ G G S+ P+
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK 74
>pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr
pdb|1BEZ|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr At Ph 5
Length = 310
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV DWG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QDWGGFLGLTLPMADPSRFKRLIIMNACL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 11 TNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
+G+ +H + GQGPLV+L+HGF + W W + LA+ + V+APD+ G G S+ P+
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK 74
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 11 TNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
+G+ +H + GQGPLV+L+HGF + W W + LA+ + V+APD+ G G S+ P+
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK 74
>pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDD|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDE|A Chain A, Refined X-Ray Structures Of Haloalkane Dehalogenase At Ph
6.2 And Ph 8.2 And Implications For The Reaction
Mechanism
pdb|2DHC|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2DHE|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2EDA|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2EDC|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2HAD|A Chain A, Crystal Structure Of Haloalkane Dehalogenase: An Enzyme To
Detoxify Halogenated Alkanes
pdb|2PKY|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
pdb|2YXP|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
Length = 310
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV DWG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QDWGGFLGLTLPMADPSRFKRLIIMNACL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of
Bromide
pdb|1BE0|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Acetic Acid
Length = 310
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV DWG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QDWGGFLGLTLPMADPSRFKRLIIMNACL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride
Length = 310
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV DWG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QDWGGFLGLTLPMADPSRFKRLIIMNAXL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V +G ++ + G G VL HG+ W+YQ+ +L+ GY +A D RG+G SD P
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDW-GAQIAWNLCLFRPDRVKALVNLGV- 126
Y F + +VG G +A + RV LV LG
Sbjct: 64 WTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121
Query: 127 ----AYMPRSPELKPTEIFFKLYGEGL-----YISQFQEP 157
P P+ P ++F + E L +IS F P
Sbjct: 122 TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAP 161
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 247 AKICVPTKFI--IGDKHMGFKSFG--TENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA 302
AKI VPT I GD+ + F++ G IKG E K V +DA H + A
Sbjct: 208 AKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK---------VYKDAPHGFAVTHA 258
Query: 303 EQITEEILSHFRK 315
+Q+ E++L+ ++
Sbjct: 259 QQLNEDLLAFLKR 271
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V +G ++ + G G VL HG+ W+YQ+ +L+ GY +A D RG+G SD P
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDW-GAQIAWNLCLFRPDRVKALVNLGV- 126
Y F + +VG G +A + RV LV LG
Sbjct: 64 WTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121
Query: 127 ----AYMPRSPELKPTEIFFKLYGEGL-----YISQFQEP 157
P P+ P ++F + E L +IS F P
Sbjct: 122 TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAP 161
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 247 AKICVPTKFI--IGDKHMGFKSFG--TENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA 302
AKI VPT I GD+ + F++ G IKG E K V +DA H + A
Sbjct: 208 AKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK---------VYKDAPHGFAVTHA 258
Query: 303 EQITEEILSHFRKKS 317
+Q+ E++L+ ++ S
Sbjct: 259 QQLNEDLLAFLKRGS 273
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
V +G ++ + G G VL HG+ W+YQ+ +L+ GY +A D RG+G SD P
Sbjct: 4 VAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP 63
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDW-GAQIAWNLCLFRPDRVKALVNLGV- 126
Y F + +VG G +A + RV LV LG
Sbjct: 64 WTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121
Query: 127 ----AYMPRSPELKPTEIFFKLYGEGL-----YISQFQEP 157
P P+ P ++F + E L +IS F P
Sbjct: 122 TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAP 161
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 247 AKICVPTKFI--IGDKHMGFKSFG--TENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA 302
AKI VPT I GD+ + F++ G IKG E K V +DA H + A
Sbjct: 208 AKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK---------VYKDAPHGFAVTHA 258
Query: 303 EQITEEILSHFRK 315
+Q+ E++L+ ++
Sbjct: 259 QQLNEDLLAFLKR 271
>pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
pdb|1HDE|B Chain B, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
Length = 310
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV DWG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QDWGGFLGLTLPMADPSRFKRLIIMNACL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3V|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3W|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3W|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3X|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R3X|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R40|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
pdb|3R40|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXX 81
G GP +LL+HGFP+ W LAE + V+ D+ GYG SD P+ E +T +
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 82 XXXXXXXXXXX---XQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ GH+ GA++++ L L P R+ L L +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 14 IWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPES 73
I ++ + G G V+LIHG+P W+YQ+ L E GY V+ D RG+G S P +
Sbjct: 17 IEIYYEDHGTGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYE 76
Query: 74 YTIFHXXXXXXXXXXXXXXXQAFVVGHD-WGAQIAWNLCLFRPDRVKALVNLGV 126
Y F +VG G ++A + + DR++ +V G
Sbjct: 77 YDTF--TSDLHQLLEQLELQNVTLVGFSXGGGEVARYISTYGTDRIEKVVFAGA 128
>pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
pdb|3B12|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 4 INHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYG 63
R V + ++ G GP +LL+HGFP+ W ++ L + Y VV D+RGYG
Sbjct: 5 FERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWA-RVAPLLANEYTVVCADLRGYG 63
Query: 64 DSDSP---QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKA 120
S P D +Y+ + +VGH G + + L PD V +
Sbjct: 64 GSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLS 123
Query: 121 LVNLGV 126
L L +
Sbjct: 124 LAVLDI 129
>pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
pdb|3R3Y|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXX 81
G GP +LL+HGFP+ W LAE + V+ D+ GYG SD P+ E +T +
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 82 XXXXXXXXXXX---XQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ GH GA++++ L L P R+ L L +
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHXRGARVSYRLALDSPGRLSKLAVLDI 137
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 7 RRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
RRV I +++ EKG GPL L HG + ++ L++ + +A D RG+G SD
Sbjct: 51 RRVDIGRITLNVREKGSGPLXLFFHGITSNSAVFEPLXIRLSDR-FTTIAVDQRGHGLSD 109
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P+ Y A +VGH GA+ + PD V+++V +
Sbjct: 110 KPE--TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAI 165
>pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 13 GIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ H ++G + L +HG P ++ I AE G V+APD G+G SD P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 DPESYTI-FHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D E YT FH VV WG + L + P R K L+ +
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVV-QXWGGFLGLTLPMADPSRFKRLIIMNACL 151
Query: 129 M 129
M
Sbjct: 152 M 152
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 10 HTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
++ I ++ + G G V+LIHGFP W+ Q L + GY V+ D RG+G S P
Sbjct: 10 NSTSIDLYYEDHGTGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT 69
Query: 70 DPESYTIF 77
Y F
Sbjct: 70 TGYDYDTF 77
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 10 HTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
++ I ++ + G G V+LIHGFP W+ Q L + GY V+ D RG+G S P
Sbjct: 9 NSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT 68
Query: 70 DPESYTIF 77
Y F
Sbjct: 69 TGYDYDTF 76
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 10 HTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
++ I ++ + G G V+LIHGFP W+ Q L + GY V+ D RG+G S P
Sbjct: 9 NSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT 68
Query: 70 DPESYTIF 77
Y F
Sbjct: 69 TGYDYDTF 76
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 10 HTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
++ I ++ + G G V+LIHGFP W+ Q L + GY V+ D RG+G S P
Sbjct: 9 NSTSIDLYYEDHGAGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT 68
Query: 70 DPESYTIF 77
Y F
Sbjct: 69 TGYDYDTF 76
>pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I
Length = 297
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 14/169 (8%)
Query: 12 NGIWMHIAEKGQGP---LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
G+ MH ++G L +HG P ++ + G VVAPD+ G+G SD P
Sbjct: 31 EGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKP 90
Query: 69 QDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128
D YT + +V DWG + L + RP V L+ + A
Sbjct: 91 TDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL 150
Query: 129 MPRSPELKPTEIF-----FKLYGEGLYISQFQE---PGVAEKSFSKYDS 169
+ L P + F F L + + + PG+ + + YD+
Sbjct: 151 ---AVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDA 196
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 25 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 84
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 85 QRGLVNARAVKGLMDALDID-RAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS 143
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 144 MFAPMP----MEGIKLLFKLYAEPSY 165
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 25 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 84
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 85 QRGLVNARAVKGLMDALDID-RAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS 143
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 144 MFAPMP----MEGIKLLFKLYAEPSY 165
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 13 GIWMHIAEKGQGPLVLLIHGFP---ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ + + G+G V+LIHG ++ W+ I L++ Y V+APDM G+G +D P+
Sbjct: 14 GVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGFTDRPE 72
Query: 70 DPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127
+ +Y+ +A +VG+ +G +A L +RV +V +G A
Sbjct: 73 N-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAA 129
>pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas
Paucimobilis Ut26 At Atomic Resolution
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD-- 66
+ G M ++G G +L HG P W+ + H A G ++A D+ G GDSD
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 SPQDPESYTIF-HXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
P PE Y H + +V HDWG+ + ++ +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYME 132
Query: 126 VAYMP 130
MP
Sbjct: 133 AIAMP 137
>pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.6 A Resolution
pdb|1D07|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 With 1,3-Propanediol, A Product Of
Debromidation Of Dibrompropane, At 2.0a Resolution
pdb|2BFN|A Chain A, The Crystal Structure Of The Complex Of The Haloalkane
Dehalogenase Linb With The Product Of Dehalogenation
Reaction 1,2-Dichloropropane
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD-- 66
+ G M ++G G +L HG P W+ + H A G ++A D+ G GDSD
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 SPQDPESYTIF-HXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
P PE Y H + +V HDWG+ + ++ +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYME 132
Query: 126 VAYMP 130
MP
Sbjct: 133 AIAMP 137
>pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane
pdb|1G4H|A Chain A, Linb Complexed With Butan-1-Ol
pdb|1G42|A Chain A, Structure Of 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene
Hydrolase (Linb) From Sphingomonas Paucimobilis
Complexed With 1,2-Dichloropropane
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD-- 66
+ G M ++G G +L HG P W+ + H A G ++A D+ G GDSD
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 SPQDPESYTIF-HXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
P PE Y H + +V HDWG+ + ++ +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYME 132
Query: 126 VAYMP 130
MP
Sbjct: 133 AIAMP 137
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 20 EKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHX 79
+K G +LL HG W+ I+ LA+ GY V+A D G+ S P + Y+
Sbjct: 42 KKANGRTILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQ-YSFQQL 100
Query: 80 XXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122
+A V+GH G +A L P +V+ LV
Sbjct: 101 AANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLV 143
>pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At
1.6 A Resolution
pdb|1IZ8|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
With 1,3-Propanediol, A Product Of Debromidation Of
Dibrompropane, At 2.0a Resolution
pdb|1K5P|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.8a Resolution
pdb|1K63|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis With Ut26
2-Bromo-2-Propene-1-Ol At 1.8a Resolution
pdb|1K6E|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,2-Propanediol
(Product Of Dehalogenation Of 1,2-Dibromopropane) At
1.85a
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 9 VHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD-- 66
+ G M ++G G +L HG P W+ + H A G ++A D+ G GDSD
Sbjct: 13 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 71
Query: 67 SPQDPESYTIF-HXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
P PE Y H + +V HDWG+ + ++ +RV+ + +
Sbjct: 72 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYME 131
Query: 126 VAYMP 130
MP
Sbjct: 132 AIAMP 136
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 14 IWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPES 73
I ++ ++G G V+LIHG+P W+ Q L GY V+ D RG+G S
Sbjct: 13 IELYYEDQGSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYD 72
Query: 74 YTIF 77
Y F
Sbjct: 73 YDTF 76
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 25 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 84
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 85 QRGLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS 143
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 144 MFAPMP----MEGIKLLFKLYAEPSY 165
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 25 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 84
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 85 QRGLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS 143
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 144 MFAPMP----MEGIKLLFKLYAEPSY 165
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 25 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 84
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 85 QRGLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS 143
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 144 MFAPMP----MEGIKLLFKLYAEPSY 165
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 16 MHIAEKGQGPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72
+H E G G V+++HG WS + + + GY V+ D G+ SD+ E
Sbjct: 22 IHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDE 81
Query: 73 SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG------- 125
+ + +A +VG+ G A N L PDR+ L+ +G
Sbjct: 82 QRGLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS 140
Query: 126 -VAYMPRSPELKPTEIFFKLYGEGLY 150
A MP ++ ++ FKLY E Y
Sbjct: 141 MFAPMP----MEGIKLLFKLYAEPSY 162
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 13 GIWMHIAEKGQGPLVLLIHGFP---ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69
G+ + + G+G V+LIHG ++ W+ I L++ Y V+APDM G+G +D P+
Sbjct: 14 GVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGFTDRPE 72
Query: 70 DPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
+ +Y+ +A +VG+ +G +A L +RV +V +G
Sbjct: 73 N-YNYSKDSWVDHIIGIMDALEIEKAHIVGNSFGGGLAIATALRYSERVDRMVLMG 127
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEAVGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 129
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 71 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 126
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 9 VHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66
V G MH + G G VL +HG P W+ I H+A + +APD+ G G SD
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 67 SPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
P Y + +V HDWG+ + ++ P+RVK + +
Sbjct: 71 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM 126
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 19 AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78
+EK V+ +HG W++ + H+ E + PD+ G G S + + H
Sbjct: 38 SEKHAENAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDH 96
Query: 79 XXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
+ VGHDWGA +A++ DR+KA+V++
Sbjct: 97 YKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHM 142
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 19 AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78
+EK V+ +HG W++ + H+ E + PD+ G G S + + H
Sbjct: 39 SEKHAENAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDH 97
Query: 79 XXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
+ VGHDWGA +A++ DR+KA+V++
Sbjct: 98 YKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHM 143
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 19 AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78
+EK V+ +HG W++ + H+ E + PD+ G G S + + H
Sbjct: 39 SEKHAENAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDH 97
Query: 79 XXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
+ VGHDWGA +A++ DR+KA+V++
Sbjct: 98 YKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHM 143
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 19 AEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78
+EK V+ +HG W++ + H+ E + PD+ G G S + + H
Sbjct: 38 SEKHAENAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDH 96
Query: 79 XXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNL 124
+ VGHDWGA +A++ DR+KA+V++
Sbjct: 97 YKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHM 142
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 12 NGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68
+G ++ + G G ++ HG+P W+ Q+ LA GY V+A D RG+G S P
Sbjct: 7 DGTQIYYKDWGSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQP 63
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 2 IDINHRRVHTNGIWMH--IAEKGQGPLVLLIHGF---PELWSCWKYQINHLAEHGYHVVA 56
++I +R + + H +A Q P V+L+HG S W+ I LAE+ + VVA
Sbjct: 5 VEIIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVA 63
Query: 57 PDMRGYGDSDSPQDPESYT---IFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLF 113
PD+ G+G S+ P+ + + ++ +VG+ G + L +
Sbjct: 64 PDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVE 123
Query: 114 RPDRVKALVNLGVAYMP---RSPELKPTEIFF 142
P+R + +G P R PEL F+
Sbjct: 124 APERFDKVALMGSVGAPMNARPPELARLLAFY 155
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 12 NGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDP 71
+G+ + + GQG V+ IHG+P W+ Q+ + + GY +A D RG+G S D
Sbjct: 7 DGVEIFYKDWGQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDG 66
Query: 72 ESYTIF 77
+ F
Sbjct: 67 YDFDTF 72
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 8/121 (6%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXX 86
V+ HG+P W Q+ HGY V+A D RG+G SD P +
Sbjct: 24 VVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTY--AADVAAL 81
Query: 87 XXXXXXXQAFVVGHD-WGAQIAWNLCLFRPDRV--KALVNLGVAYMPRS---PELKPTEI 140
A +GH G ++A + P RV LV+ M +S P+ P E+
Sbjct: 82 TEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEV 141
Query: 141 F 141
F
Sbjct: 142 F 142
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 7 RRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSC---WKYQINHLAEHGYHVVAPDMRGYG 63
R V+ G+ E G+G V+LIHG W+ I LA H Y V+A DM G+G
Sbjct: 19 RFVNAGGVETRYLEAGKGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFG 77
Query: 64 DSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVN 123
+ P D E + +VG+ G + + + V ALV
Sbjct: 78 KTAKP-DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVL 136
Query: 124 LGVA 127
+G A
Sbjct: 137 MGSA 140
>pdb|2O2H|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With
1,2-Dichloroethane
pdb|2O2I|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With 1,3-Propandiol
Length = 300
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 13 GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD--SPQD 70
G M ++G+G ++ HG P W+ + HL G +VA D+ G G SD SP
Sbjct: 19 GKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSPSG 77
Query: 71 PESYTIFHXXXXXXXX-XXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129
P+ Y+ +V HDWG+ + ++ DRV+ G+A+M
Sbjct: 78 PDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQ-----GIAFM 132
>pdb|2QVB|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
pdb|2QVB|B Chain B, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
Length = 297
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 13 GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD--SPQD 70
G M ++G+G ++ HG P W+ + HL G +VA D+ G G SD SP
Sbjct: 17 GKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSPSG 75
Query: 71 PESYTIFHXXXXXXXX-XXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129
P+ Y+ +V HDWG+ + ++ DRV+ G+A+M
Sbjct: 76 PDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQ-----GIAFM 130
>pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G5X|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G9E|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
pdb|4G9E|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
Length = 279
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 2 IDINHRRVHTNGIWMHIAE-KGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60
+ IN+ + T+ + + E +G+G +L+IHG + + Q+ + V+APD+
Sbjct: 1 MTINYHELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLP 60
Query: 61 GYGDSDSPQDPE-SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S DP+ SY++ A V G G I + P+ ++
Sbjct: 61 GHGKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MR 119
Query: 120 ALVNLGVAYMPR 131
L+ G + R
Sbjct: 120 GLMITGTPPVAR 131
>pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G8C|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G9G|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
pdb|4G9G|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
Length = 279
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 2 IDINHRRVHTNGIWMHIAE-KGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60
+ IN+ + T+ + + E +G+G +L+IHG + + Q+ + V+APD+
Sbjct: 1 MTINYHELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLP 60
Query: 61 GYGDSDSPQDPE-SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S DP+ SY++ A V G G I + P+ ++
Sbjct: 61 GHGKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MR 119
Query: 120 ALVNLGVAYMPR 131
L+ G + R
Sbjct: 120 GLMITGTPPVAR 131
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 16 MHIAEKGQG-PLVLLIHGF---PELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDP 71
+H + GQG V+L+HG W+ + I+ L E GY V+ D G+G SDS +
Sbjct: 27 IHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNS 86
Query: 72 ESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
S + + + ++G+ G + L P+RV LV +G
Sbjct: 87 GSRSDLN-ARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMG 139
>pdb|4G8B|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8B|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8D|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
pdb|4G8D|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
Length = 279
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 2 IDINHRRVHTNGIWMHIAE-KGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60
+ IN+ + T+ + + E +G+G +L+IHG + + Q+ + V+APD+
Sbjct: 1 MTINYHELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLP 60
Query: 61 GYGDSDSPQDPE-SYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVK 119
G+G S DP+ SY++ A V G G I + P+ ++
Sbjct: 61 GHGKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWGLGGHIGIEMIARYPE-MR 119
Query: 120 ALVNLGVAYMPR 131
L+ G + R
Sbjct: 120 GLMITGTPPVAR 131
>pdb|3O4H|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4H|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4I|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4I|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 17 HIAEKGQ----GPLVLLIHG--FPELWSCWKYQINHLAEHGYHVVAPDMRG 61
++ E G+ GP V+L+HG F E W LA G+HVV P+ RG
Sbjct: 349 YVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG 399
>pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
Aeropyrum Pernix K1
pdb|1VE6|B Chain B, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
Aeropyrum Pernix K1
pdb|1VE7|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
AEROPYRUM Pernix K1 In Complex With P-Nitrophenyl
Phosphate
pdb|1VE7|B Chain B, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM
AEROPYRUM Pernix K1 In Complex With P-Nitrophenyl
Phosphate
pdb|2HU5|A Chain A, Binding Of Inhibitors By Acylaminoacyl-Peptidase
pdb|2HU5|B Chain B, Binding Of Inhibitors By Acylaminoacyl-Peptidase
pdb|2HU7|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|2HU7|B Chain B, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|3O4G|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4G|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 17 HIAEKGQ----GPLVLLIHG--FPELWSCWKYQINHLAEHGYHVVAPDMRG 61
++ E G+ GP V+L+HG F E W LA G+HVV P+ RG
Sbjct: 349 YVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG 399
>pdb|2HU8|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase
pdb|2HU8|B Chain B, Binding Of Inhibitors By Acylaminoacyl Peptidase
Length = 582
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 17 HIAEKGQ----GPLVLLIHG--FPELWSCWKYQINHLAEHGYHVVAPDMRG 61
++ E G+ GP V+L+HG F E W LA G+HVV P+ RG
Sbjct: 349 YVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG 399
>pdb|3O4J|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|B Chain B, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|C Chain C, Structure And Catalysis Of Acylaminoacyl Peptidase
pdb|3O4J|D Chain D, Structure And Catalysis Of Acylaminoacyl Peptidase
Length = 582
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 17 HIAEKGQ----GPLVLLIHG--FPELWSCWKYQINHLAEHGYHVVAPDMRG 61
++ E G+ GP V+L+HG F E W LA G+HVV P+ RG
Sbjct: 349 YVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG 399
>pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide
HydrolaseESTERASE FROM AEROPYRUM PERNIX K1
pdb|2QZP|B Chain B, Crystal Structure Of Mutation Of An Acylptide
HydrolaseESTERASE FROM AEROPYRUM PERNIX K1
Length = 562
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 17 HIAEKGQ----GPLVLLIHG--FPELWSCWKYQINHLAEHGYHVVAPDMRG 61
++ E G+ GP V+L+HG F E W LA G+HVV P+ RG
Sbjct: 329 YVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG 379
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 17 HIAEKGQGPLVLLIHGF---PELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPES 73
H A G V+L+HG W+ + I LA H +HV+A D GYG SD +
Sbjct: 49 HEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQ 107
Query: 74 YTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
+ + + +VG+ G A L P R LV +G
Sbjct: 108 FNRY-AAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMG 158
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS 65
P++ HG+P W Q+ HGY VVA D RG+G S
Sbjct: 23 PVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRS 63
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 17 HIAEKGQGPLVLLIHGF---PELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPES 73
H A G V+L+HG W+ + I LA H +HV+A D GYG SD +
Sbjct: 29 HEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQ 87
Query: 74 YTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125
+ + + +VG+ G A L P R LV +G
Sbjct: 88 FNRY-AAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMG 138
>pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase
From Serratia Marcescens
pdb|1WM1|A Chain A, Crystal Structure Of Prolyl Aminopeptidase, Complex With
Pro-tboda
pdb|1X2B|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Sar-Tboda
pdb|1X2E|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Ala-Tboda
Length = 317
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 52 YHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLC 111
Y V+ D RG G S ++ T +H Q V G WG+ +A
Sbjct: 64 YKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYA 123
Query: 112 LFRPDRVKALVNLGV 126
P+RV +V G+
Sbjct: 124 QTHPERVSEMVLRGI 138
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ-DPESYTIFHXXXXXXX 85
++L HGF S WK+ + HL + Y VV D G G ++ D + Y+
Sbjct: 38 IVLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLI 96
Query: 86 XXXXXXXXQAFV-VGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131
++ + VGH A I L RPD +V + + PR
Sbjct: 97 AILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISAS--PR 141
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 4 INHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKY----QINHLAEHGYHVVAPDM 59
+ +V NG+ +H + G+G +L+ P + + Q+ +L + + VVA D
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLL--LPGMLGSGETDFGPQLKNLNKKLFTVVAWDP 59
Query: 60 RGYGDSDSP 68
RGYG S P
Sbjct: 60 RGYGHSRPP 68
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed
With A Product Analogue
Length = 254
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 4 INHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKY----QINHLAEHGYHVVAPDM 59
+ +V NG+ +H + G+G +L+ P + + Q+ +L + + VVA D
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLL--LPGMLGSGETDFGPQLKNLNKKLFTVVAWDP 59
Query: 60 RGYGDSDSP 68
RGYG S P
Sbjct: 60 RGYGHSRPP 68
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 4 INHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKY----QINHLAEHGYHVVAPDM 59
+ +V NG+ +H + G+G +L+ P + + Q+ +L + + VVA D
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLL--LPGMLGSGETDFGPQLKNLNKKLFTVVAWDP 59
Query: 60 RGYGDSDSP 68
RGYG S P
Sbjct: 60 RGYGHSRPP 68
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ-DPESYTIFHXXXXXXX 85
++L HGF S WK+ + HL + Y VV D G G ++ D + Y+
Sbjct: 20 IVLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLI 78
Query: 86 XXXXXXXXQAFV-VGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131
++ + VGH A I L RPD +V + + PR
Sbjct: 79 AILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISAS--PR 123
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ-DPESYTIFHXXXXXXX 85
++L HGF S WK+ + HL + Y VV D G G ++ D + Y+
Sbjct: 22 IVLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLI 80
Query: 86 XXXXXXXXQAFV-VGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131
++ + VGH A I L RPD +V + + PR
Sbjct: 81 AILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISAS--PR 125
>pdb|3MVE|A Chain A, Crystal Structure Of A Novel Pyruvate Decarboxylase
pdb|3MVE|B Chain B, Crystal Structure Of A Novel Pyruvate Decarboxylase
Length = 415
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 25 PLVLLIHGFPELWS-CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXX 83
P+V++ G L + W+ +HLA+H ++ DM G S E Y+ H
Sbjct: 194 PVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLN 253
Query: 84 XXXXX-XXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ ++G +G L +++KA V LG
Sbjct: 254 ELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGA 297
>pdb|3OUR|A Chain A, Crystal Structure Of Complex Between Eiia And A Novel
Pyruvate Decarboxylase
pdb|3OUR|C Chain C, Crystal Structure Of Complex Between Eiia And A Novel
Pyruvate Decarboxylase
pdb|3OUR|E Chain E, Crystal Structure Of Complex Between Eiia And A Novel
Pyruvate Decarboxylase
pdb|3OUR|G Chain G, Crystal Structure Of Complex Between Eiia And A Novel
Pyruvate Decarboxylase
Length = 435
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 25 PLVLLIHGFPELWS-CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXX 83
P+V++ G L + W+ +HLA+H ++ DM G S E Y+ H
Sbjct: 214 PVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLN 273
Query: 84 XXXXX-XXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126
+ ++G +G L +++KA V LG
Sbjct: 274 ELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGA 317
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 26 LVLLIHGFP--ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXX 83
+ ++ HGF S + N L + V D G+GDSD E+ T+ +
Sbjct: 48 MAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF--ENMTVLNEIEDA 105
Query: 84 XXXXXXXXX----XQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELK 136
++VGH G +A L PD +K +V L A + L+
Sbjct: 106 NAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALE 162
>pdb|3MR2|A Chain A, Human Dna Polymerase Eta In Complex With Normal Dna And
Incoming Nucleotide (Nrm)
pdb|3MR3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
3't Of A Cpd In The Active Site (Tt1)
pdb|3MR5|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A Cpd
1bp Upstream Of The Active Site (Tt3)
pdb|3SI8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
5't Of A Cpd In The Active Site (Tt2)
pdb|4DL2|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Cg
Template (Gg0a)
pdb|4DL3|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Gg
Template (Gg0b).
pdb|4DL4|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
3'g Of Cisplatin Crosslinked Gs (Pt-Gg1).
pdb|4DL5|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
5'g Of Cisplatin Crosslinked Gs (Pt-Gg2).
pdb|4DL6|A Chain A, Human Dna Polymerase Eta Extending Primer Immediately
After Cisplatin Crosslink (Pt-Gg3).
pdb|4DL7|A Chain A, Human Dna Polymerase Eta Fails To Extend Primer 2
Nucleotide After Cisplatin Crosslink (Pt-Gg4).
pdb|4ECQ|A Chain A, Human Dna Polymerase Eta- Dna Ternary Complex: At Crystal
At Ph6.8(K+ Mes) With 1 Ca2+ Ion
pdb|4ECR|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 40 Sec
pdb|4ECS|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 80 Sec
pdb|4ECT|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 140 Sec
pdb|4ECU|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 200 Sec
pdb|4ECV|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 230 Sec
pdb|4ECW|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 250 Sec
pdb|4ECX|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 300 Sec
pdb|4ECY|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ECZ|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.5 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED0|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.8 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED1|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED2|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.2 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.5 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 6.7 For 15 Hr, Sideway
Translocation
pdb|4ED7|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Tg Crystal
At Ph 7.0 (K+ Mes) With 1 Ca2+ Ion
pdb|4ED8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The Tg Crystal At Ph 7.0, Normal Translocation
Length = 435
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 265 KSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKKSII 319
++FG + D+ K L PDL + +R+++ L K + + E++ + ++I
Sbjct: 58 RAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVI 112
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
Query: 12 NGIWMHIAEKGQGPL-VLLIHGF---PELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDS 67
N IW KGQG + ++L+HG+ E+W C +++ + H+V D+ G+G S
Sbjct: 2 NNIWWQT--KGQGNVHLVLLHGWGLNAEVWRCIDEELS--SHFTLHLV--DLPGFGRS-- 53
Query: 68 PQDPESYTIFHXXXXXXXXXXXXXXXQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127
+ +A +G G +A + L P+RV+ALV + +
Sbjct: 54 ----RGFGAL-SLADXAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASS 108
Query: 128 --YMPRS--PELKPTEIFFKLYGEGLYISQFQEPGVAE--------KSFSKYDSLTVLKK 175
+ R P +KP L G +S Q+ V ++ D+ + K
Sbjct: 109 PCFSARDEWPGIKPD----VLAGFQQQLSDDQQRTVERFLALQTXGTETARQDARALKKT 164
Query: 176 LLLVNAPDIIAAPAGVEII 194
+L + P++ G+EI+
Sbjct: 165 VLALPXPEVDVLNGGLEIL 183
>pdb|3MR6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A Cpd
2bp Upstream Of The Active Site (Tt4)
pdb|3TQ1|A Chain A, Human Dna Polymerase Eta In Binary Complex With Dna
pdb|4EEY|A Chain A, Crystal Structure Of Human Dna Polymerase Eta In Ternary
Complex With A Cisplatin Dna Adduct
Length = 435
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 265 KSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKKSII 319
++FG + D+ K L PDL + +R+++ L K + + E++ + ++I
Sbjct: 58 RAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVI 112
>pdb|3BWX|A Chain A, Crystal Structure Of An Alpha/beta Hydrolase
(yp_496220.1) From Novosphingobium Aromaticivorans Dsm
12444 At 1.50 A Resolution
Length = 285
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 52 YHVVAPDMRGYGDSDSPQDPESY 74
+ V+ P+ RG GDSD +DP +Y
Sbjct: 56 WRVLCPEXRGRGDSDYAKDPXTY 78
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 23 QGPLVLLIHGFPELWSCWK-YQINHLAEHGYHVVAPDMRGYGDS--DSPQDPESYTIFHX 79
+GP++LL+HG W + ++ +VA D+R +G++ +P+D + T+
Sbjct: 37 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKD 96
Query: 80 XXXXXXXXXXXXXXQAFVVGHDWGAQIA 107
++GH G IA
Sbjct: 97 VGNVVEAMYGDLPPPIMLIGHSMGGAIA 124
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 1 MIDINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQ--INHLAEHGYHVVAPD 58
ID+N RV + + L HG+ W N+ ++ GY+V APD
Sbjct: 8 FIDVNGTRVFQRKXVTDSNRRS----IALFHGYSFTSXDWDKADLFNNYSKIGYNVYAPD 63
Query: 59 MRGYGDSDSPQ 69
G+G S S +
Sbjct: 64 YPGFGRSASSE 74
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 279 KTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHF 313
+ VPD+E VI++A H + E+ + E + F
Sbjct: 270 SSFVPDIEAEVIKNAGHVLSXEQPTYVNERVXRFF 304
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 31 HGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS 65
HG+P W Q+ G+ VVA D RG+G S
Sbjct: 33 HGWPLSSDDWDAQLLFFVNKGFRVVAHDRRGHGRS 67
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 27 VLLIHGFPELWSCWKY--QINHLAEHGYHVVAPDMRGYGDSDSPQDP 71
VLL+HG W+ ++ LA+ GY VA D+ G G S P
Sbjct: 35 VLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP 81
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 23 QGPLVLLIHGFPELWSCWK-YQINHLAEHGYHVVAPDMRGYGDS--DSPQDPESYTIFHX 79
+GP++LL+HG W + ++ +VA D+R +G++ +P+D + T+
Sbjct: 41 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKD 100
Query: 80 XXXXXXXXXXXXXXQAFVVGHDWGAQIA 107
++GH G IA
Sbjct: 101 VGNVVEAMYGDLPPPIMLIGHAMGGAIA 128
>pdb|4FBM|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBM|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 293
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXX 86
VL+ HGF ++ A GY V P + G+G + + + + +
Sbjct: 52 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMR 111
Query: 87 XXXXXXXQAFVVGHDWGAQIA-WNLCLFRPDRVKALVNLGVAYMPRSPEL 135
F+ G G + W F P+R ++ + A SP+L
Sbjct: 112 WLEERCDVLFMTGLSMGGALTVWAAGQF-PERFAGIMPINAALRMESPDL 160
>pdb|4FBL|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|C Chain C, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|D Chain D, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 281
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Query: 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHXXXXXXXX 86
VL+ HGF ++ A GY V P + G+G + + + + +
Sbjct: 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMR 113
Query: 87 XXXXXXXQAFVVGHDWGAQIA-WNLCLFRPDRVKALVNLGVAYMPRSPEL 135
F+ G G + W F P+R ++ + A SP+L
Sbjct: 114 WLEERCDVLFMTGLSMGGALTVWAAGQF-PERFAGIMPINAALRMESPDL 162
>pdb|3STD|A Chain A, Scytalone Dehydratase And Cyanocinnoline Inhibitor
pdb|3STD|B Chain B, Scytalone Dehydratase And Cyanocinnoline Inhibitor
pdb|3STD|C Chain C, Scytalone Dehydratase And Cyanocinnoline Inhibitor
Length = 165
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 191 VEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKIC 250
+ D+L + + EW + D + W T ++Y +DK WE P +
Sbjct: 4 ITFSDYLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWE-AMPAEEFVGM 62
Query: 251 VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD 284
V +K ++GD + T+++I G ++ + D
Sbjct: 63 VSSKQVLGD-----PTLRTQHFIGGTRWEKVSED 91
>pdb|1R3D|A Chain A, Crystal Structure Of Protein Vc1974 From Vibrio
Cholerae, Pfam Abhydrolase
Length = 264
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 16 MHIAE-KGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS 65
+H A+ + PLV+L+HG + W+ ++HLA + D+ G+G +
Sbjct: 7 LHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTN 57
>pdb|1IDP|A Chain A, Crystal Structure Of Scytalone Dehydratase F162a Mutant In
The Unligated State
pdb|1IDP|B Chain B, Crystal Structure Of Scytalone Dehydratase F162a Mutant In
The Unligated State
pdb|1IDP|C Chain C, Crystal Structure Of Scytalone Dehydratase F162a Mutant In
The Unligated State
Length = 172
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 191 VEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKIC 250
+ D+L + + EW + D + W T ++Y +DK WE P +
Sbjct: 11 ITFSDYLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWE-AMPAEEFVGM 69
Query: 251 VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD 284
V +K ++GD + T+++I G ++ + D
Sbjct: 70 VSSKQVLGD-----PTLRTQHFIGGTRWEKVSED 98
>pdb|4STD|A Chain A, High Resolution Structures Of Scytalone
Dehydratase-Inhibitor Complexes Crystallized At
Physiological Ph
pdb|4STD|B Chain B, High Resolution Structures Of Scytalone
Dehydratase-Inhibitor Complexes Crystallized At
Physiological Ph
pdb|4STD|C Chain C, High Resolution Structures Of Scytalone
Dehydratase-Inhibitor Complexes Crystallized At
Physiological Ph
pdb|5STD|A Chain A, Scytalone Dehydratase Plus Inhibitor 2
pdb|5STD|B Chain B, Scytalone Dehydratase Plus Inhibitor 2
pdb|5STD|C Chain C, Scytalone Dehydratase Plus Inhibitor 2
pdb|6STD|A Chain A, Scytalone Dehydratase Plus Inhibitor 3
pdb|6STD|B Chain B, Scytalone Dehydratase Plus Inhibitor 3
pdb|6STD|C Chain C, Scytalone Dehydratase Plus Inhibitor 3
pdb|7STD|A Chain A, Scytalone Dehydratase Plus Inhibitor 4
pdb|7STD|B Chain B, Scytalone Dehydratase Plus Inhibitor 4
pdb|7STD|C Chain C, Scytalone Dehydratase Plus Inhibitor 4
Length = 164
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 191 VEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKIC 250
+ D+L + + EW + D + W T ++Y +DK WE P +
Sbjct: 3 ITFSDYLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWE-AMPAEEFVGM 61
Query: 251 VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD 284
V +K ++GD + T+++I G ++ + D
Sbjct: 62 VSSKQVLGD-----PTLRTQHFIGGTRWEKVSED 90
>pdb|1STD|A Chain A, Crystal Structure Of Scytalone Dehydratase: A Disease
Determinant Of The Rice Pathogen, Magnaporthe Grisea
pdb|2STD|A Chain A, Scytalone Dehydratase Complexed With Tight-Binding
Inhibitor Carpropamid
Length = 172
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 191 VEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKIC 250
+ D+L + + EW + D + W T ++Y +DK WE P +
Sbjct: 11 ITFSDYLGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWE-AMPAEEFVGM 69
Query: 251 VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD 284
V +K ++GD + T+++I G ++ + D
Sbjct: 70 VSSKQVLGD-----PTLRTQHFIGGTRWEKVSED 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,684,248
Number of Sequences: 62578
Number of extensions: 463578
Number of successful extensions: 1123
Number of sequences better than 100.0: 124
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 935
Number of HSP's gapped (non-prelim): 140
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)