Query 020621
Match_columns 323
No_of_seqs 289 out of 1124
Neff 11.9
Searched_HMMs 46136
Date Fri Mar 29 03:50:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020621.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020621hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1.1E-46 2.4E-51 284.9 25.1 299 2-317 20-321 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 2.2E-39 4.8E-44 259.0 23.6 279 3-316 7-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 1.9E-38 4.1E-43 253.8 25.2 272 3-317 6-290 (295)
4 PLN02679 hydrolase, alpha/beta 100.0 6.4E-38 1.4E-42 255.7 24.6 285 6-317 63-358 (360)
5 PRK00870 haloalkane dehalogena 100.0 1.4E-37 3E-42 249.4 25.3 273 3-316 18-301 (302)
6 TIGR02240 PHA_depoly_arom poly 100.0 2.5E-37 5.5E-42 244.8 22.3 263 4-318 2-268 (276)
7 PRK03204 haloalkane dehalogena 100.0 2.6E-37 5.7E-42 244.9 22.3 262 3-313 13-285 (286)
8 PLN02965 Probable pheophorbida 100.0 1.2E-35 2.5E-40 232.4 22.8 246 26-317 5-254 (255)
9 PLN03087 BODYGUARD 1 domain co 100.0 1.4E-35 3.1E-40 244.5 22.7 287 4-316 176-479 (481)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.6E-35 5.6E-40 234.7 23.1 266 4-314 5-281 (282)
11 PLN02578 hydrolase 100.0 7.7E-35 1.7E-39 237.4 24.4 282 6-314 68-353 (354)
12 TIGR03056 bchO_mg_che_rel puta 100.0 6.7E-35 1.5E-39 232.1 22.4 268 5-314 7-278 (278)
13 PRK10349 carboxylesterase BioH 100.0 1.2E-34 2.6E-39 227.3 20.0 243 16-315 4-255 (256)
14 PRK06489 hypothetical protein; 100.0 1.6E-34 3.6E-39 236.2 21.5 283 10-317 46-358 (360)
15 PLN03084 alpha/beta hydrolase 100.0 1.6E-33 3.5E-38 228.3 23.9 265 7-315 108-383 (383)
16 PLN02385 hydrolase; alpha/beta 100.0 7.9E-34 1.7E-38 231.6 21.0 262 7-317 65-346 (349)
17 PRK10673 acyl-CoA esterase; Pr 100.0 1.9E-33 4E-38 220.8 20.7 235 23-315 15-254 (255)
18 PRK08775 homoserine O-acetyltr 100.0 1.4E-33 3E-38 229.5 19.6 279 6-318 38-341 (343)
19 PRK10749 lysophospholipase L2; 100.0 3.1E-32 6.6E-37 220.2 25.8 125 5-129 32-167 (330)
20 TIGR03611 RutD pyrimidine util 100.0 7.2E-33 1.6E-37 217.9 20.4 250 17-315 2-257 (257)
21 PRK11126 2-succinyl-6-hydroxy- 100.0 9E-33 1.9E-37 215.1 20.4 100 24-128 2-102 (242)
22 PHA02857 monoglyceride lipase; 100.0 1.3E-32 2.9E-37 218.1 20.4 252 8-316 5-273 (276)
23 PLN02211 methyl indole-3-aceta 100.0 2.8E-32 6.1E-37 214.0 20.0 258 11-315 4-269 (273)
24 PLN02298 hydrolase, alpha/beta 100.0 1.1E-31 2.4E-36 217.8 23.6 264 6-322 34-323 (330)
25 PRK07581 hypothetical protein; 100.0 9.8E-33 2.1E-37 224.7 17.5 284 10-316 22-336 (339)
26 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.6E-32 3.5E-37 215.0 17.6 246 16-314 2-251 (251)
27 TIGR01392 homoserO_Ac_trn homo 100.0 1.6E-32 3.4E-37 224.0 16.2 121 10-130 12-164 (351)
28 PRK00175 metX homoserine O-ace 100.0 4E-32 8.7E-37 223.0 18.3 120 10-129 29-183 (379)
29 TIGR01738 bioH putative pimelo 100.0 4E-32 8.6E-37 212.1 17.5 237 22-313 1-245 (245)
30 KOG1454 Predicted hydrolase/ac 100.0 2.7E-32 5.8E-37 216.4 16.5 255 23-316 57-324 (326)
31 TIGR03695 menH_SHCHC 2-succiny 100.0 8.3E-32 1.8E-36 210.9 19.1 250 24-314 1-251 (251)
32 KOG4409 Predicted hydrolase/ac 100.0 3.6E-31 7.7E-36 201.5 21.4 256 23-316 89-364 (365)
33 PF12697 Abhydrolase_6: Alpha/ 100.0 1.6E-32 3.5E-37 211.8 13.0 224 27-308 1-228 (228)
34 TIGR01250 pro_imino_pep_2 prol 100.0 2.1E-31 4.5E-36 213.1 19.4 122 7-128 5-131 (288)
35 PRK14875 acetoin dehydrogenase 100.0 1E-30 2.3E-35 216.3 22.7 254 7-315 112-370 (371)
36 PLN02894 hydrolase, alpha/beta 100.0 2.4E-29 5.2E-34 207.2 23.8 106 23-130 104-213 (402)
37 COG2267 PldB Lysophospholipase 100.0 1.5E-29 3.2E-34 199.0 20.1 267 5-317 11-295 (298)
38 PLN02511 hydrolase 100.0 9.2E-30 2E-34 209.0 17.1 267 4-317 71-366 (388)
39 PLN02980 2-oxoglutarate decarb 100.0 3.4E-29 7.5E-34 235.7 23.2 112 16-128 1360-1480(1655)
40 TIGR01249 pro_imino_pep_1 prol 100.0 5.6E-29 1.2E-33 199.5 20.9 124 5-129 5-131 (306)
41 PLN02652 hydrolase; alpha/beta 100.0 1.3E-28 2.8E-33 201.1 22.0 252 12-318 119-389 (395)
42 PRK05855 short chain dehydroge 100.0 8E-29 1.7E-33 217.1 21.7 121 4-125 3-128 (582)
43 KOG1455 Lysophospholipase [Lip 100.0 2.6E-28 5.6E-33 182.5 18.0 260 7-316 31-312 (313)
44 COG1647 Esterase/lipase [Gener 100.0 3.6E-28 7.8E-33 172.7 16.2 222 25-315 16-243 (243)
45 KOG2984 Predicted hydrolase [G 100.0 5.8E-29 1.3E-33 173.6 11.7 251 3-316 20-276 (277)
46 KOG2382 Predicted alpha/beta h 100.0 8.8E-28 1.9E-32 182.8 18.3 256 23-316 51-313 (315)
47 PRK06765 homoserine O-acetyltr 100.0 1.9E-27 4.1E-32 193.4 18.7 287 12-315 39-387 (389)
48 TIGR01607 PST-A Plasmodium sub 99.9 3.3E-26 7E-31 184.4 20.2 120 10-129 4-186 (332)
49 PRK10985 putative hydrolase; P 99.9 8.2E-26 1.8E-30 182.2 20.6 265 6-316 33-320 (324)
50 PRK05077 frsA fermentation/res 99.9 2.3E-25 5E-30 183.6 23.3 216 23-316 193-412 (414)
51 PLN02872 triacylglycerol lipas 99.9 6.2E-25 1.4E-29 178.7 18.2 302 3-316 43-389 (395)
52 PRK13604 luxD acyl transferase 99.9 6.5E-24 1.4E-28 163.8 20.5 118 8-129 13-142 (307)
53 TIGR03100 hydr1_PEP hydrolase, 99.9 4.2E-24 9.1E-29 168.1 19.0 102 23-129 25-135 (274)
54 PRK10566 esterase; Provisional 99.9 7E-24 1.5E-28 165.6 19.0 124 1-125 1-139 (249)
55 TIGR01838 PHA_synth_I poly(R)- 99.9 3E-24 6.4E-29 179.4 13.7 258 23-303 187-462 (532)
56 PRK11071 esterase YqiA; Provis 99.9 7.6E-24 1.6E-28 156.5 13.4 89 25-129 2-94 (190)
57 KOG2564 Predicted acetyltransf 99.9 5.5E-23 1.2E-27 151.4 15.7 103 23-127 73-181 (343)
58 PF00561 Abhydrolase_1: alpha/ 99.9 9E-25 1.9E-29 168.9 6.1 76 52-127 1-78 (230)
59 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-23 2.6E-28 171.7 11.8 102 24-130 62-173 (350)
60 PRK07868 acyl-CoA synthetase; 99.9 3.1E-22 6.8E-27 183.1 16.5 270 23-319 66-364 (994)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 5.7E-22 1.2E-26 141.7 10.5 93 26-126 1-93 (145)
62 COG0596 MhpC Predicted hydrola 99.9 2.5E-20 5.4E-25 147.5 20.3 115 10-129 6-124 (282)
63 KOG4667 Predicted esterase [Li 99.9 1E-20 2.3E-25 134.0 15.4 224 21-316 30-258 (269)
64 PF03096 Ndr: Ndr family; Int 99.9 4.2E-20 9E-25 139.7 19.6 264 7-317 2-280 (283)
65 PF06342 DUF1057: Alpha/beta h 99.9 1.3E-19 2.8E-24 135.1 21.8 239 26-314 37-297 (297)
66 KOG1838 Alpha/beta hydrolase [ 99.9 3.7E-20 8E-25 146.3 19.7 268 4-315 93-387 (409)
67 COG2021 MET2 Homoserine acetyl 99.9 2E-20 4.3E-25 144.9 15.1 286 12-315 34-367 (368)
68 PRK11460 putative hydrolase; P 99.9 2.9E-20 6.2E-25 142.2 16.0 179 23-315 15-211 (232)
69 COG3208 GrsT Predicted thioest 99.9 2.8E-20 6.1E-25 136.0 14.6 226 23-316 6-236 (244)
70 COG0429 Predicted hydrolase of 99.9 1.4E-19 3.1E-24 137.8 18.0 246 23-317 74-341 (345)
71 KOG2931 Differentiation-relate 99.8 8.3E-19 1.8E-23 130.6 20.7 268 5-317 23-307 (326)
72 KOG1552 Predicted alpha/beta h 99.8 6.6E-20 1.4E-24 135.0 14.5 190 24-317 60-253 (258)
73 TIGR03101 hydr2_PEP hydrolase, 99.8 1.1E-19 2.4E-24 139.9 14.9 104 24-129 25-135 (266)
74 PF00326 Peptidase_S9: Prolyl 99.8 1.5E-19 3.3E-24 137.4 12.7 197 40-317 3-210 (213)
75 PLN02442 S-formylglutathione h 99.8 8.1E-19 1.8E-23 138.4 17.1 107 23-129 46-179 (283)
76 TIGR02821 fghA_ester_D S-formy 99.8 4.5E-18 9.8E-23 134.0 21.0 107 23-129 41-174 (275)
77 PLN00021 chlorophyllase 99.8 1.2E-18 2.6E-23 138.0 16.4 106 22-129 50-167 (313)
78 KOG4391 Predicted alpha/beta h 99.8 1.7E-19 3.6E-24 128.1 8.5 209 12-317 63-283 (300)
79 COG1506 DAP2 Dipeptidyl aminop 99.8 3.2E-18 7E-23 148.9 16.8 228 8-317 369-617 (620)
80 KOG2565 Predicted hydrolases o 99.8 3.4E-17 7.3E-22 125.9 15.7 292 7-317 127-464 (469)
81 TIGR01839 PHA_synth_II poly(R) 99.8 7.3E-18 1.6E-22 139.8 12.9 103 24-131 215-331 (560)
82 PF02230 Abhydrolase_2: Phosph 99.8 1.7E-17 3.7E-22 126.1 13.5 181 23-316 13-215 (216)
83 PF01738 DLH: Dienelactone hyd 99.7 3E-17 6.5E-22 125.2 13.0 182 23-316 13-217 (218)
84 PF06500 DUF1100: Alpha/beta h 99.7 5.9E-16 1.3E-20 123.7 20.2 123 5-129 166-297 (411)
85 COG2945 Predicted hydrolase of 99.7 3.3E-16 7.1E-21 109.7 15.2 169 23-314 27-205 (210)
86 TIGR01849 PHB_depoly_PhaZ poly 99.7 8.2E-17 1.8E-21 129.8 14.0 104 25-132 103-212 (406)
87 PRK10162 acetyl esterase; Prov 99.7 7.6E-16 1.6E-20 123.7 18.8 102 23-129 80-196 (318)
88 TIGR01840 esterase_phb esteras 99.7 1.8E-16 3.9E-21 120.2 13.6 106 23-128 12-130 (212)
89 TIGR03230 lipo_lipase lipoprot 99.7 1.6E-16 3.5E-21 129.6 12.8 105 23-129 40-155 (442)
90 COG0412 Dienelactone hydrolase 99.7 3.9E-15 8.5E-20 113.4 17.1 179 25-316 28-233 (236)
91 COG0400 Predicted esterase [Ge 99.7 1.8E-15 3.9E-20 111.3 13.1 175 23-315 17-204 (207)
92 PF00975 Thioesterase: Thioest 99.7 1.3E-14 2.7E-19 112.0 18.4 100 25-128 1-104 (229)
93 cd00707 Pancreat_lipase_like P 99.7 2.3E-16 5.1E-21 123.4 8.5 115 13-129 24-148 (275)
94 PF05448 AXE1: Acetyl xylan es 99.7 1.7E-14 3.7E-19 114.6 19.1 106 23-130 82-211 (320)
95 PF06821 Ser_hydrolase: Serine 99.6 1.5E-15 3.2E-20 109.4 8.6 88 27-128 1-91 (171)
96 PRK10115 protease 2; Provision 99.6 6.1E-14 1.3E-18 123.2 18.2 119 12-130 425-561 (686)
97 PF08538 DUF1749: Protein of u 99.6 5.8E-14 1.3E-18 107.8 15.1 99 24-131 33-151 (303)
98 PF05728 UPF0227: Uncharacteri 99.6 1E-13 2.2E-18 100.9 15.7 88 27-130 2-93 (187)
99 KOG2624 Triglyceride lipase-ch 99.6 7.1E-14 1.5E-18 112.8 16.0 298 4-317 48-399 (403)
100 TIGR03502 lipase_Pla1_cef extr 99.6 1.1E-14 2.4E-19 126.3 12.2 109 5-113 419-575 (792)
101 COG3243 PhaC Poly(3-hydroxyalk 99.6 1.3E-14 2.9E-19 114.4 9.8 103 24-131 107-220 (445)
102 PF02273 Acyl_transf_2: Acyl t 99.6 5.3E-13 1.2E-17 97.4 17.1 118 7-128 5-134 (294)
103 PF12146 Hydrolase_4: Putative 99.6 1.8E-14 3.9E-19 89.2 8.0 75 13-88 1-79 (79)
104 COG4757 Predicted alpha/beta h 99.6 7.9E-14 1.7E-18 100.7 12.1 113 12-126 14-136 (281)
105 TIGR00976 /NonD putative hydro 99.6 2.1E-14 4.5E-19 124.1 9.9 115 12-129 5-133 (550)
106 PF12740 Chlorophyllase2: Chlo 99.6 1.7E-13 3.7E-18 103.3 13.3 105 22-128 15-131 (259)
107 COG3458 Acetyl esterase (deace 99.5 2.3E-13 5.1E-18 100.7 12.9 107 22-130 81-212 (321)
108 PF10230 DUF2305: Uncharacteri 99.5 5.3E-13 1.1E-17 103.9 15.7 107 24-130 2-124 (266)
109 COG3571 Predicted hydrolase of 99.5 1.5E-12 3.2E-17 88.5 15.3 106 26-131 16-127 (213)
110 PTZ00472 serine carboxypeptida 99.5 4.4E-12 9.6E-17 106.3 18.2 124 6-130 49-218 (462)
111 PF07859 Abhydrolase_3: alpha/ 99.5 5.8E-13 1.2E-17 101.3 11.7 95 27-130 1-112 (211)
112 PRK10252 entF enterobactin syn 99.5 4.8E-12 1E-16 121.3 20.0 102 21-127 1065-1170(1296)
113 PF07224 Chlorophyllase: Chlor 99.5 9.2E-13 2E-17 97.3 11.5 107 22-130 44-159 (307)
114 KOG3043 Predicted hydrolase re 99.4 2E-12 4.3E-17 93.3 10.6 194 7-316 21-240 (242)
115 COG3545 Predicted esterase of 99.4 7.1E-12 1.5E-16 87.2 12.6 92 24-129 2-95 (181)
116 PF02129 Peptidase_S15: X-Pro 99.4 1E-13 2.3E-18 109.2 3.5 106 23-131 19-139 (272)
117 PF06028 DUF915: Alpha/beta hy 99.4 6.4E-12 1.4E-16 96.0 12.4 108 23-130 10-145 (255)
118 KOG1515 Arylacetamide deacetyl 99.4 9.3E-11 2E-15 93.0 19.0 116 12-132 72-211 (336)
119 PRK05371 x-prolyl-dipeptidyl a 99.4 1.3E-11 2.7E-16 109.5 15.3 83 43-128 271-373 (767)
120 PF03403 PAF-AH_p_II: Platelet 99.4 2.6E-12 5.6E-17 104.8 10.1 107 23-130 99-264 (379)
121 PF09752 DUF2048: Uncharacteri 99.4 9.9E-11 2.2E-15 91.6 17.8 105 23-127 91-209 (348)
122 COG3319 Thioesterase domains o 99.4 1.6E-10 3.4E-15 88.1 18.3 100 25-129 1-104 (257)
123 PF06057 VirJ: Bacterial virul 99.4 6.8E-11 1.5E-15 84.4 14.7 98 25-129 3-108 (192)
124 PF07819 PGAP1: PGAP1-like pro 99.4 8.9E-12 1.9E-16 94.4 10.9 103 23-130 3-125 (225)
125 KOG2100 Dipeptidyl aminopeptid 99.3 4.9E-11 1.1E-15 105.5 16.3 224 4-316 498-747 (755)
126 PF03959 FSH1: Serine hydrolas 99.3 4.8E-12 1E-16 95.5 7.9 105 23-128 3-145 (212)
127 COG4188 Predicted dienelactone 99.3 9.6E-12 2.1E-16 97.5 9.3 93 24-116 71-182 (365)
128 KOG2551 Phospholipase/carboxyh 99.3 1.5E-10 3.2E-15 83.8 14.0 60 248-316 161-220 (230)
129 KOG3975 Uncharacterized conser 99.3 2.9E-10 6.3E-15 83.5 15.2 125 4-128 1-147 (301)
130 PLN02733 phosphatidylcholine-s 99.3 2.4E-11 5.1E-16 100.4 10.5 123 6-129 70-202 (440)
131 PRK04940 hypothetical protein; 99.3 4.4E-10 9.5E-15 80.2 15.0 86 27-130 2-94 (180)
132 COG0657 Aes Esterase/lipase [L 99.3 5.5E-10 1.2E-14 90.2 17.3 103 23-130 78-193 (312)
133 PF10503 Esterase_phd: Esteras 99.2 4.9E-10 1.1E-14 83.8 14.2 107 23-129 15-133 (220)
134 KOG2112 Lysophospholipase [Lip 99.2 2.4E-10 5.2E-15 82.2 11.2 103 25-127 4-127 (206)
135 smart00824 PKS_TE Thioesterase 99.2 2.7E-09 5.8E-14 81.2 18.0 95 29-128 2-102 (212)
136 PF08840 BAAT_C: BAAT / Acyl-C 99.2 1.8E-11 4E-16 92.2 5.4 51 79-130 5-58 (213)
137 PF05677 DUF818: Chlamydia CHL 99.2 1.4E-08 3E-13 78.9 20.3 107 4-115 112-237 (365)
138 PF11339 DUF3141: Protein of u 99.2 9.8E-10 2.1E-14 89.6 14.6 236 45-299 95-351 (581)
139 KOG4627 Kynurenine formamidase 99.2 2.5E-10 5.5E-15 81.3 9.9 106 17-130 57-174 (270)
140 PF03583 LIP: Secretory lipase 99.2 1.5E-10 3.3E-15 91.4 9.0 67 248-316 217-285 (290)
141 PF01674 Lipase_2: Lipase (cla 99.2 1E-10 2.2E-15 87.2 6.8 89 25-114 2-96 (219)
142 PF00450 Peptidase_S10: Serine 99.1 7.1E-09 1.5E-13 87.5 17.0 125 5-130 12-183 (415)
143 KOG2281 Dipeptidyl aminopeptid 99.1 1.1E-09 2.5E-14 90.9 11.5 208 24-315 642-866 (867)
144 PF00151 Lipase: Lipase; Inte 99.0 8.4E-10 1.8E-14 88.3 5.1 106 23-130 70-189 (331)
145 COG4814 Uncharacterized protei 98.9 7.5E-08 1.6E-12 71.3 14.1 105 25-129 46-177 (288)
146 KOG3847 Phospholipase A2 (plat 98.9 6.8E-09 1.5E-13 79.1 8.7 106 24-130 118-277 (399)
147 PF12715 Abhydrolase_7: Abhydr 98.9 7E-09 1.5E-13 82.4 8.7 104 23-127 114-259 (390)
148 PLN02606 palmitoyl-protein thi 98.9 1E-06 2.2E-11 68.3 18.2 101 23-128 25-132 (306)
149 KOG4840 Predicted hydrolases o 98.8 4.2E-07 9.1E-12 66.0 14.7 103 23-130 35-146 (299)
150 COG1075 LipA Predicted acetylt 98.8 1.8E-08 3.9E-13 81.4 7.8 100 25-128 60-164 (336)
151 PF05990 DUF900: Alpha/beta hy 98.8 8.9E-08 1.9E-12 73.2 10.3 105 23-129 17-138 (233)
152 COG4099 Predicted peptidase [G 98.8 6.7E-08 1.4E-12 73.3 9.3 102 25-129 192-305 (387)
153 PF12048 DUF3530: Protein of u 98.8 1.3E-06 2.9E-11 69.7 17.3 104 25-128 88-229 (310)
154 KOG3253 Predicted alpha/beta h 98.7 1.4E-07 3E-12 78.4 10.5 97 24-129 176-287 (784)
155 PF05705 DUF829: Eukaryotic pr 98.7 4.5E-07 9.8E-12 70.3 12.9 64 248-313 176-240 (240)
156 KOG1551 Uncharacterized conser 98.7 7.3E-07 1.6E-11 66.6 12.5 59 252-317 308-367 (371)
157 COG3509 LpqC Poly(3-hydroxybut 98.7 3.7E-07 8.1E-12 69.6 11.0 122 7-128 38-179 (312)
158 COG3150 Predicted esterase [Ge 98.7 1E-06 2.2E-11 61.1 11.9 90 27-130 2-93 (191)
159 PF05057 DUF676: Putative seri 98.7 7.1E-08 1.5E-12 73.1 7.0 85 25-112 5-97 (217)
160 PRK10439 enterobactin/ferric e 98.7 7.7E-07 1.7E-11 73.9 13.5 104 24-128 209-323 (411)
161 COG2936 Predicted acyl esteras 98.7 2.4E-07 5.2E-12 77.9 10.1 118 12-130 28-161 (563)
162 PF04301 DUF452: Protein of un 98.6 1.4E-06 3E-11 64.5 12.3 84 24-133 11-95 (213)
163 PF05577 Peptidase_S28: Serine 98.6 5E-07 1.1E-11 76.5 11.3 107 24-130 29-150 (434)
164 KOG1553 Predicted alpha/beta h 98.6 1.6E-07 3.5E-12 72.8 7.1 98 25-127 244-344 (517)
165 PLN02209 serine carboxypeptida 98.6 1.2E-05 2.5E-10 67.4 18.6 124 6-130 41-214 (437)
166 PLN02633 palmitoyl protein thi 98.6 1.4E-05 3E-10 62.2 17.4 101 23-128 24-131 (314)
167 PLN03016 sinapoylglucose-malat 98.5 5.7E-05 1.2E-09 63.3 19.5 66 250-316 347-431 (433)
168 KOG3724 Negative regulator of 98.5 1.5E-06 3.2E-11 74.8 10.0 100 24-128 89-220 (973)
169 KOG1282 Serine carboxypeptidas 98.4 3.8E-05 8.2E-10 63.9 17.3 125 5-130 45-215 (454)
170 PF00756 Esterase: Putative es 98.4 8.9E-07 1.9E-11 69.3 7.0 107 24-130 24-152 (251)
171 PF02450 LCAT: Lecithin:choles 98.4 3.3E-06 7.2E-11 70.0 10.2 108 12-129 38-161 (389)
172 PF11144 DUF2920: Protein of u 98.3 1E-05 2.3E-10 65.3 11.6 36 94-129 185-220 (403)
173 COG0627 Predicted esterase [Ge 98.3 1.4E-05 3E-10 63.6 11.8 108 25-132 55-191 (316)
174 KOG3101 Esterase D [General fu 98.3 9.5E-07 2.1E-11 63.7 4.8 107 24-130 44-178 (283)
175 COG2939 Carboxypeptidase C (ca 98.3 0.00016 3.4E-09 60.0 16.6 106 23-129 100-237 (498)
176 cd00312 Esterase_lipase Estera 98.2 9.7E-06 2.1E-10 70.1 10.0 106 23-130 94-215 (493)
177 PF08386 Abhydrolase_4: TAP-li 98.2 2.3E-06 5E-11 56.3 4.6 62 249-316 33-94 (103)
178 COG4782 Uncharacterized protei 98.2 1E-05 2.2E-10 63.9 8.5 106 24-129 116-235 (377)
179 KOG2237 Predicted serine prote 98.2 2E-05 4.3E-10 66.6 10.1 125 6-130 443-586 (712)
180 PLN02213 sinapoylglucose-malat 98.2 7E-05 1.5E-09 60.5 12.8 66 250-316 233-317 (319)
181 COG3946 VirJ Type IV secretory 98.1 0.0001 2.2E-09 59.1 12.6 93 26-125 262-362 (456)
182 KOG2541 Palmitoyl protein thio 98.1 3E-05 6.6E-10 58.4 9.2 99 25-128 24-128 (296)
183 COG1770 PtrB Protease II [Amin 98.1 2.8E-05 6.1E-10 66.1 9.8 120 12-131 428-565 (682)
184 COG1505 Serine proteases of th 98.1 2.3E-05 5.1E-10 65.8 8.3 125 4-128 394-535 (648)
185 PF05576 Peptidase_S37: PS-10 98.0 0.00026 5.7E-09 57.2 13.3 105 23-129 62-170 (448)
186 PF10340 DUF2424: Protein of u 98.0 6.4E-05 1.4E-09 60.7 10.0 106 23-131 121-238 (374)
187 PF02089 Palm_thioest: Palmito 98.0 5.9E-06 1.3E-10 63.6 3.8 103 24-128 5-116 (279)
188 COG1073 Hydrolases of the alph 98.0 0.00011 2.4E-09 59.0 11.1 64 248-316 229-297 (299)
189 COG4553 DepA Poly-beta-hydroxy 98.0 0.0014 2.9E-08 50.5 15.7 105 24-132 103-213 (415)
190 PF10142 PhoPQ_related: PhoPQ- 98.0 0.0003 6.6E-09 57.1 13.2 60 248-316 260-320 (367)
191 KOG2369 Lecithin:cholesterol a 97.9 1.9E-05 4.1E-10 64.6 4.4 88 38-128 124-225 (473)
192 COG2272 PnbA Carboxylesterase 97.9 3.1E-05 6.8E-10 63.9 5.6 118 12-129 78-218 (491)
193 KOG2183 Prolylcarboxypeptidase 97.9 0.00014 2.9E-09 58.5 8.9 104 25-128 81-202 (492)
194 PLN02517 phosphatidylcholine-s 97.8 5.8E-05 1.2E-09 64.0 7.0 90 38-129 156-264 (642)
195 KOG3967 Uncharacterized conser 97.8 0.00033 7.1E-09 51.0 9.2 106 24-129 101-228 (297)
196 KOG2182 Hydrolytic enzymes of 97.8 0.00021 4.5E-09 59.0 9.0 108 23-130 85-209 (514)
197 PF00135 COesterase: Carboxyle 97.7 0.00016 3.4E-09 63.5 8.7 119 12-130 107-247 (535)
198 COG2382 Fes Enterochelin ester 97.7 0.00076 1.6E-08 52.4 10.6 107 23-130 97-214 (299)
199 cd00741 Lipase Lipase. Lipase 97.6 0.00017 3.6E-09 51.7 5.9 52 78-129 9-68 (153)
200 PF07082 DUF1350: Protein of u 97.6 0.0063 1.4E-07 46.2 13.9 92 26-125 19-122 (250)
201 PF01764 Lipase_3: Lipase (cla 97.5 0.0003 6.5E-09 49.5 5.9 38 77-114 48-85 (140)
202 PF11187 DUF2974: Protein of u 97.4 0.0036 7.8E-08 47.6 10.8 51 79-130 71-125 (224)
203 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0049 1.1E-07 44.8 9.3 55 76-130 87-146 (177)
204 cd00519 Lipase_3 Lipase (class 97.0 0.0019 4.1E-08 49.8 5.5 24 91-114 126-149 (229)
205 PF06441 EHN: Epoxide hydrolas 96.9 0.0036 7.9E-08 41.6 5.5 40 4-43 68-111 (112)
206 COG2819 Predicted hydrolase of 96.8 0.0021 4.6E-08 49.2 4.7 49 81-129 122-173 (264)
207 PF04083 Abhydro_lipase: Parti 96.8 0.0037 8E-08 36.6 4.7 38 4-41 12-60 (63)
208 PLN02162 triacylglycerol lipas 96.8 0.0036 7.8E-08 52.0 6.1 37 76-112 261-297 (475)
209 PLN00413 triacylglycerol lipas 96.8 0.0041 8.9E-08 51.9 6.4 37 76-112 267-303 (479)
210 KOG2521 Uncharacterized conser 96.8 0.033 7.1E-07 45.1 11.2 66 249-316 224-290 (350)
211 COG4947 Uncharacterized protei 96.8 0.0027 6E-08 44.7 4.4 114 13-130 14-138 (227)
212 PF11288 DUF3089: Protein of u 96.7 0.004 8.6E-08 46.2 5.2 69 45-114 40-116 (207)
213 PF01083 Cutinase: Cutinase; 96.6 0.0072 1.6E-07 44.3 6.2 74 52-129 40-123 (179)
214 KOG1516 Carboxylesterase and r 96.4 0.018 3.8E-07 50.8 8.0 117 12-128 95-232 (545)
215 PLN02571 triacylglycerol lipas 96.3 0.0075 1.6E-07 49.8 4.8 37 77-113 208-246 (413)
216 PLN02454 triacylglycerol lipas 96.3 0.0081 1.8E-07 49.5 5.0 33 81-113 214-248 (414)
217 COG2830 Uncharacterized protei 96.3 0.11 2.3E-06 36.5 9.4 82 26-133 13-95 (214)
218 COG4287 PqaA PhoPQ-activated p 96.2 0.14 3.1E-06 41.3 11.3 60 248-316 327-387 (507)
219 PLN02408 phospholipase A1 96.0 0.012 2.5E-07 47.9 4.7 36 79-114 184-221 (365)
220 KOG4372 Predicted alpha/beta h 96.0 0.011 2.3E-07 48.1 4.4 88 24-112 80-169 (405)
221 PF05277 DUF726: Protein of un 95.9 0.024 5.3E-07 45.9 6.1 40 91-130 218-262 (345)
222 PLN02310 triacylglycerol lipas 95.9 0.024 5.2E-07 46.8 6.0 37 77-113 189-229 (405)
223 PLN02934 triacylglycerol lipas 95.8 0.016 3.5E-07 48.8 4.9 36 77-112 305-340 (515)
224 KOG1202 Animal-type fatty acid 95.6 0.073 1.6E-06 49.7 8.1 95 23-128 2122-2219(2376)
225 PLN02324 triacylglycerol lipas 95.5 0.025 5.4E-07 46.7 4.7 35 79-113 199-235 (415)
226 PLN02802 triacylglycerol lipas 95.3 0.031 6.7E-07 47.3 4.6 37 78-114 313-351 (509)
227 PLN03037 lipase class 3 family 95.2 0.034 7.4E-07 47.1 4.6 36 78-113 299-338 (525)
228 PF07519 Tannase: Tannase and 95.2 0.11 2.3E-06 44.8 7.6 66 249-316 352-427 (474)
229 PLN02753 triacylglycerol lipas 95.2 0.035 7.6E-07 47.1 4.6 36 78-113 292-332 (531)
230 PLN02761 lipase class 3 family 94.9 0.045 9.7E-07 46.5 4.6 35 78-112 273-313 (527)
231 PLN02719 triacylglycerol lipas 94.8 0.049 1.1E-06 46.2 4.6 35 79-113 279-318 (518)
232 KOG1283 Serine carboxypeptidas 94.4 0.21 4.6E-06 39.5 6.8 106 23-130 30-168 (414)
233 PLN02847 triacylglycerol lipas 94.3 0.085 1.8E-06 45.6 4.9 23 91-113 249-271 (633)
234 PF08237 PE-PPE: PE-PPE domain 94.2 0.52 1.1E-05 36.1 8.6 80 51-130 2-91 (225)
235 PF06850 PHB_depo_C: PHB de-po 94.0 0.055 1.2E-06 39.5 2.9 63 250-315 134-201 (202)
236 KOG4569 Predicted lipase [Lipi 94.0 0.098 2.1E-06 42.8 4.6 37 77-113 155-191 (336)
237 PF09949 DUF2183: Uncharacteri 93.6 0.86 1.9E-05 29.7 7.6 84 39-123 12-97 (100)
238 COG5153 CVT17 Putative lipase 92.3 0.33 7.2E-06 37.7 4.9 26 90-115 273-298 (425)
239 KOG4540 Putative lipase essent 92.3 0.33 7.2E-06 37.7 4.9 26 90-115 273-298 (425)
240 PF07519 Tannase: Tannase and 89.2 0.47 1E-05 40.9 3.6 80 48-129 56-151 (474)
241 TIGR03712 acc_sec_asp2 accesso 89.1 14 0.0003 31.8 12.4 102 17-126 280-388 (511)
242 KOG4388 Hormone-sensitive lipa 88.9 1.1 2.3E-05 38.9 5.3 98 26-128 398-508 (880)
243 PF03283 PAE: Pectinacetyleste 88.6 2 4.3E-05 35.6 6.7 39 92-130 155-197 (361)
244 PF06792 UPF0261: Uncharacteri 88.6 6.5 0.00014 32.9 9.5 101 25-125 2-127 (403)
245 PRK02399 hypothetical protein; 87.1 17 0.00037 30.6 11.1 98 28-125 6-129 (406)
246 KOG2385 Uncharacterized conser 87.0 2 4.4E-05 36.6 5.8 42 89-130 443-489 (633)
247 KOG2029 Uncharacterized conser 86.9 1.3 2.8E-05 38.5 4.7 53 75-127 505-571 (697)
248 cd01714 ETF_beta The electron 83.1 7.2 0.00016 29.4 6.9 69 46-124 71-145 (202)
249 PRK12467 peptide synthase; Pro 83.0 5.9 0.00013 44.3 8.6 96 25-125 3693-3792(3956)
250 PF00698 Acyl_transf_1: Acyl t 78.8 1.9 4E-05 35.3 2.7 31 83-113 74-104 (318)
251 smart00827 PKS_AT Acyl transfe 78.4 3 6.4E-05 33.6 3.7 31 83-113 72-102 (298)
252 PRK10279 hypothetical protein; 78.0 3.7 8E-05 33.1 4.0 34 83-116 23-56 (300)
253 COG0529 CysC Adenylylsulfate k 78.0 6.4 0.00014 28.7 4.7 61 22-86 20-84 (197)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 77.8 4 8.8E-05 33.1 4.2 33 82-114 32-64 (306)
255 cd07198 Patatin Patatin-like p 77.7 4.6 9.9E-05 29.5 4.2 33 83-115 16-48 (172)
256 PF09994 DUF2235: Uncharacteri 77.2 25 0.00055 28.1 8.5 90 25-114 2-113 (277)
257 cd07207 Pat_ExoU_VipD_like Exo 76.8 4.8 0.0001 30.0 4.2 31 84-114 18-48 (194)
258 COG3340 PepE Peptidase E [Amin 76.6 14 0.0003 27.9 6.2 37 23-59 31-70 (224)
259 TIGR03131 malonate_mdcH malona 76.3 3.8 8.2E-05 33.0 3.8 31 83-113 66-96 (295)
260 PF10081 Abhydrolase_9: Alpha/ 75.6 5.3 0.00012 31.5 4.1 53 78-130 91-149 (289)
261 PRK05579 bifunctional phosphop 75.1 38 0.00083 28.8 9.3 73 24-100 116-196 (399)
262 cd07210 Pat_hypo_W_succinogene 74.1 6.7 0.00015 30.1 4.4 31 85-115 20-50 (221)
263 cd07227 Pat_Fungal_NTE1 Fungal 73.9 5.7 0.00012 31.5 4.0 32 83-114 28-59 (269)
264 COG3933 Transcriptional antite 72.7 28 0.00061 29.6 7.7 72 25-109 110-181 (470)
265 TIGR00521 coaBC_dfp phosphopan 72.4 50 0.0011 28.0 9.3 72 25-100 113-193 (390)
266 COG1752 RssA Predicted esteras 72.4 6.1 0.00013 32.1 4.0 32 83-114 29-60 (306)
267 TIGR00128 fabD malonyl CoA-acy 72.0 5.1 0.00011 32.1 3.6 31 84-114 73-104 (290)
268 cd07230 Pat_TGL4-5_like Triacy 71.6 3.6 7.8E-05 35.0 2.6 38 84-121 92-129 (421)
269 cd07228 Pat_NTE_like_bacteria 70.9 8.4 0.00018 28.2 4.2 31 85-115 20-50 (175)
270 COG1448 TyrB Aspartate/tyrosin 70.8 36 0.00078 28.4 7.8 85 25-126 172-263 (396)
271 cd07209 Pat_hypo_Ecoli_Z1214_l 70.5 8.2 0.00018 29.4 4.1 33 83-115 16-48 (215)
272 PF03610 EIIA-man: PTS system 70.0 30 0.00066 23.2 7.7 73 26-111 2-76 (116)
273 PF06309 Torsin: Torsin; Inte 69.4 30 0.00065 23.8 6.1 56 23-89 51-115 (127)
274 cd07229 Pat_TGL3_like Triacylg 67.5 5.3 0.00011 33.5 2.7 38 85-122 103-140 (391)
275 PRK11613 folP dihydropteroate 67.3 44 0.00096 26.8 7.6 57 42-107 167-225 (282)
276 cd07231 Pat_SDP1-like Sugar-De 67.1 5.4 0.00012 32.2 2.6 40 83-122 86-125 (323)
277 cd07205 Pat_PNPLA6_PNPLA7_NTE1 67.1 12 0.00027 27.2 4.4 30 85-114 20-49 (175)
278 cd07232 Pat_PLPL Patain-like p 67.0 5.2 0.00011 33.9 2.6 40 83-122 85-124 (407)
279 PRK05282 (alpha)-aspartyl dipe 66.5 23 0.00049 27.5 5.8 38 23-60 30-70 (233)
280 COG4822 CbiK Cobalamin biosynt 62.0 54 0.0012 24.9 6.6 58 26-98 140-199 (265)
281 PF00448 SRP54: SRP54-type pro 62.0 57 0.0012 24.5 7.1 74 41-124 73-148 (196)
282 PF11713 Peptidase_C80: Peptid 61.7 4.2 9.2E-05 29.1 1.0 49 57-105 59-116 (157)
283 TIGR02764 spore_ybaN_pdaB poly 60.9 7.8 0.00017 28.8 2.4 33 26-58 153-188 (191)
284 cd07208 Pat_hypo_Ecoli_yjju_li 60.6 16 0.00034 29.0 4.2 32 85-116 18-50 (266)
285 TIGR02873 spore_ylxY probable 60.4 11 0.00023 30.0 3.2 34 25-58 231-264 (268)
286 TIGR02816 pfaB_fam PfaB family 59.1 13 0.00027 32.9 3.6 31 84-114 255-286 (538)
287 COG3946 VirJ Type IV secretory 59.0 52 0.0011 27.8 6.7 100 26-125 50-154 (456)
288 TIGR01626 ytfJ_HI0045 conserve 58.6 74 0.0016 23.7 7.9 91 7-110 38-141 (184)
289 COG4850 Uncharacterized conser 58.5 38 0.00082 27.5 5.7 88 39-128 226-315 (373)
290 TIGR02884 spore_pdaA delta-lac 57.7 13 0.00028 28.6 3.2 34 25-58 187-221 (224)
291 PHA02114 hypothetical protein 57.1 18 0.00038 23.2 3.0 33 26-58 84-116 (127)
292 PF01583 APS_kinase: Adenylyls 56.6 25 0.00054 25.2 4.2 36 25-60 2-39 (156)
293 cd07212 Pat_PNPLA9 Patatin-lik 56.3 24 0.00051 28.8 4.5 19 96-114 35-53 (312)
294 PRK14974 cell division protein 55.7 95 0.0021 25.8 7.9 67 48-124 219-287 (336)
295 PF10605 3HBOH: 3HB-oligomer h 55.3 14 0.00031 32.7 3.2 37 95-131 287-324 (690)
296 PF04244 DPRP: Deoxyribodipyri 54.9 36 0.00078 26.2 5.0 48 40-98 51-98 (224)
297 PF12242 Eno-Rase_NADH_b: NAD( 54.4 24 0.00052 21.6 3.2 24 91-114 38-61 (78)
298 cd05312 NAD_bind_1_malic_enz N 54.0 39 0.00084 27.0 5.2 82 26-111 26-124 (279)
299 COG0541 Ffh Signal recognition 53.4 79 0.0017 27.1 7.0 70 46-125 177-248 (451)
300 cd07224 Pat_like Patatin-like 53.1 27 0.00058 27.1 4.2 32 84-115 18-51 (233)
301 cd07206 Pat_TGL3-4-5_SDP1 Tria 52.1 24 0.00052 28.5 3.8 30 89-118 93-122 (298)
302 PF09419 PGP_phosphatase: Mito 51.8 65 0.0014 23.5 5.7 53 47-103 36-88 (168)
303 cd03146 GAT1_Peptidase_E Type 51.5 77 0.0017 24.1 6.4 84 23-109 30-129 (212)
304 PF05724 TPMT: Thiopurine S-me 51.2 19 0.00041 27.6 3.1 30 25-59 38-67 (218)
305 PLN03019 carbonic anhydrase 50.7 24 0.00052 28.8 3.6 33 78-110 200-232 (330)
306 cd07211 Pat_PNPLA8 Patatin-lik 50.0 56 0.0012 26.6 5.8 17 96-112 44-60 (308)
307 TIGR01425 SRP54_euk signal rec 49.1 1.6E+02 0.0034 25.6 8.3 70 45-124 176-247 (429)
308 COG1073 Hydrolases of the alph 49.1 0.87 1.9E-05 36.4 -4.7 91 23-115 48-154 (299)
309 KOG0781 Signal recognition par 48.9 79 0.0017 27.5 6.4 86 29-124 443-538 (587)
310 PRK10916 ADP-heptose:LPS hepto 48.7 1.6E+02 0.0034 24.5 11.2 16 301-316 331-346 (348)
311 PF08484 Methyltransf_14: C-me 48.7 75 0.0016 23.0 5.6 49 78-126 52-102 (160)
312 PF00326 Peptidase_S9: Prolyl 47.9 49 0.0011 24.9 5.0 61 23-89 143-208 (213)
313 KOG1200 Mitochondrial/plastidi 47.7 1.1E+02 0.0024 23.1 6.2 24 37-60 24-47 (256)
314 PF05577 Peptidase_S28: Serine 47.5 36 0.00078 29.3 4.6 41 250-299 376-416 (434)
315 KOG2872 Uroporphyrinogen decar 47.4 70 0.0015 25.6 5.5 70 25-101 253-336 (359)
316 KOG3086 Predicted dioxygenase 47.0 56 0.0012 25.3 4.8 54 75-128 18-79 (296)
317 PF14359 DUF4406: Domain of un 46.8 76 0.0017 20.4 6.4 67 38-114 16-85 (92)
318 PRK13256 thiopurine S-methyltr 46.8 20 0.00043 27.6 2.6 29 26-59 45-73 (226)
319 PF03976 PPK2: Polyphosphate k 46.4 23 0.00051 27.3 2.9 67 24-104 30-100 (228)
320 TIGR02069 cyanophycinase cyano 46.3 72 0.0016 25.1 5.6 38 23-60 27-66 (250)
321 COG3621 Patatin [General funct 46.1 70 0.0015 26.2 5.4 51 52-115 9-64 (394)
322 PRK15219 carbonic anhydrase; P 46.0 19 0.00042 28.1 2.4 34 78-111 128-161 (245)
323 PLN00416 carbonate dehydratase 46.0 41 0.00089 26.5 4.2 33 79-111 126-158 (258)
324 COG1582 FlgEa Uncharacterized 45.3 56 0.0012 19.1 3.5 40 279-319 22-61 (67)
325 cd07204 Pat_PNPLA_like Patatin 45.2 42 0.00091 26.2 4.2 20 96-115 34-53 (243)
326 PRK07313 phosphopantothenoylcy 44.5 1.2E+02 0.0027 22.4 6.4 61 24-88 113-179 (182)
327 PLN03014 carbonic anhydrase 44.5 35 0.00076 28.1 3.7 32 79-110 206-237 (347)
328 cd06292 PBP1_LacI_like_10 Liga 44.3 1.3E+02 0.0028 23.6 7.1 21 40-60 72-92 (273)
329 PF14488 DUF4434: Domain of un 44.2 69 0.0015 23.3 4.9 59 35-93 17-80 (166)
330 TIGR03709 PPK2_rel_1 polyphosp 44.2 37 0.00081 26.9 3.8 66 23-102 54-123 (264)
331 cd00883 beta_CA_cladeA Carboni 44.2 31 0.00068 25.5 3.2 33 79-111 67-99 (182)
332 KOG1283 Serine carboxypeptidas 43.7 23 0.0005 28.7 2.5 64 249-312 324-410 (414)
333 cd07218 Pat_iPLA2 Calcium-inde 43.5 45 0.00097 26.1 4.1 20 96-115 33-52 (245)
334 COG3727 Vsr DNA G:T-mismatch r 43.5 38 0.00082 23.3 3.1 33 25-57 58-114 (150)
335 COG0218 Predicted GTPase [Gene 43.5 42 0.00091 25.2 3.7 16 54-69 72-87 (200)
336 COG2185 Sbm Methylmalonyl-CoA 43.4 1.2E+02 0.0025 21.5 6.4 38 22-59 10-48 (143)
337 PF03490 Varsurf_PPLC: Variant 43.0 31 0.00067 18.9 2.2 28 72-99 4-31 (51)
338 KOG4389 Acetylcholinesterase/B 42.8 38 0.00082 29.4 3.8 106 25-130 136-257 (601)
339 cd01819 Patatin_and_cPLA2 Pata 42.0 51 0.0011 23.5 4.0 19 93-111 28-46 (155)
340 TIGR03707 PPK2_P_aer polyphosp 41.9 45 0.00097 25.8 3.8 68 24-105 30-101 (230)
341 PF14253 AbiH: Bacteriophage a 41.7 28 0.0006 27.6 2.9 15 91-105 233-247 (270)
342 cd07221 Pat_PNPLA3 Patatin-lik 41.4 52 0.0011 25.9 4.2 22 94-115 33-54 (252)
343 PRK04435 hypothetical protein; 41.2 74 0.0016 22.6 4.6 44 16-59 59-102 (147)
344 PRK09936 hypothetical protein; 40.8 1.1E+02 0.0023 24.7 5.7 52 36-93 36-87 (296)
345 PF02230 Abhydrolase_2: Phosph 40.7 93 0.002 23.6 5.5 57 24-89 155-214 (216)
346 COG3673 Uncharacterized conser 40.6 2.1E+02 0.0045 23.6 8.5 89 25-113 32-142 (423)
347 cd03818 GT1_ExpC_like This fam 40.5 57 0.0012 27.6 4.7 38 27-66 2-39 (396)
348 PLN03006 carbonate dehydratase 40.3 35 0.00075 27.5 3.1 31 79-109 158-188 (301)
349 TIGR03586 PseI pseudaminic aci 40.2 2.2E+02 0.0047 23.7 7.7 81 23-113 133-214 (327)
350 COG0279 GmhA Phosphoheptose is 40.1 35 0.00075 24.7 2.7 74 28-105 44-121 (176)
351 TIGR03249 KdgD 5-dehydro-4-deo 39.7 2E+02 0.0044 23.3 12.7 87 36-129 24-111 (296)
352 PF00484 Pro_CA: Carbonic anhy 39.6 79 0.0017 22.4 4.7 36 76-111 38-73 (153)
353 cd00401 AdoHcyase S-adenosyl-L 39.5 2.5E+02 0.0054 24.2 8.8 70 39-124 73-142 (413)
354 cd07220 Pat_PNPLA2 Patatin-lik 39.4 56 0.0012 25.7 4.1 22 94-115 37-58 (249)
355 cd02065 B12-binding_like B12 b 39.2 1.2E+02 0.0025 20.4 6.5 33 26-58 2-34 (125)
356 COG1087 GalE UDP-glucose 4-epi 39.2 1.5E+02 0.0033 24.2 6.3 88 41-130 14-122 (329)
357 PF03681 UPF0150: Uncharacteri 39.1 41 0.00088 18.2 2.4 33 49-88 11-43 (48)
358 PF03853 YjeF_N: YjeF-related 39.1 44 0.00095 24.3 3.3 35 23-57 24-58 (169)
359 cd00382 beta_CA Carbonic anhyd 39.0 45 0.00097 22.6 3.1 31 78-108 44-74 (119)
360 PRK09273 hypothetical protein; 38.8 1.8E+02 0.0038 22.2 7.4 77 38-125 17-94 (211)
361 COG2452 Predicted site-specifi 38.6 1.6E+02 0.0036 21.9 5.9 53 26-90 117-169 (193)
362 PRK15180 Vi polysaccharide bio 38.5 1.1E+02 0.0023 26.7 5.7 78 24-101 96-197 (831)
363 cd00952 CHBPH_aldolase Trans-o 38.4 2.2E+02 0.0048 23.3 8.7 88 36-130 27-116 (309)
364 TIGR00421 ubiX_pad polyprenyl 38.0 1.7E+02 0.0036 21.7 7.3 62 24-93 112-174 (181)
365 cd07025 Peptidase_S66 LD-Carbo 37.5 1.8E+02 0.004 23.4 6.8 56 28-88 3-59 (282)
366 COG0331 FabD (acyl-carrier-pro 37.4 42 0.0009 27.4 3.2 22 91-112 83-104 (310)
367 COG0288 CynT Carbonic anhydras 36.9 36 0.00078 25.8 2.6 36 77-112 76-111 (207)
368 KOG2316 Predicted ATPase (PP-l 36.7 52 0.0011 25.1 3.3 65 44-109 56-120 (277)
369 cd07222 Pat_PNPLA4 Patatin-lik 36.7 58 0.0013 25.5 3.8 23 95-118 33-55 (246)
370 PRK10437 carbonic anhydrase; P 36.6 34 0.00074 26.2 2.5 33 79-111 77-109 (220)
371 PRK06731 flhF flagellar biosyn 36.3 2.2E+02 0.0049 22.8 8.7 71 44-124 146-219 (270)
372 PRK14457 ribosomal RNA large s 36.3 2.6E+02 0.0056 23.4 7.9 77 26-111 259-337 (345)
373 COG0518 GuaA GMP synthase - Gl 36.2 1.9E+02 0.0041 21.8 6.5 33 79-111 64-96 (198)
374 PF13439 Glyco_transf_4: Glyco 36.1 1.5E+02 0.0033 20.9 6.0 29 32-60 10-38 (177)
375 PRK06490 glutamine amidotransf 36.1 2.1E+02 0.0046 22.4 8.3 34 78-111 70-103 (239)
376 PF06289 FlbD: Flagellar prote 35.8 76 0.0016 18.5 3.2 36 280-316 23-58 (60)
377 COG3887 Predicted signaling pr 35.5 70 0.0015 28.6 4.3 49 79-128 322-378 (655)
378 PRK04148 hypothetical protein; 35.5 72 0.0016 22.3 3.7 43 79-125 4-46 (134)
379 PRK07451 translation initiatio 35.5 1.4E+02 0.0031 20.2 6.4 65 17-92 43-108 (115)
380 PRK06029 3-octaprenyl-4-hydrox 35.1 1.9E+02 0.0041 21.6 7.1 62 24-93 115-177 (185)
381 cd00006 PTS_IIA_man PTS_IIA, P 34.8 1.5E+02 0.0032 20.1 7.6 70 26-108 3-73 (122)
382 PF01734 Patatin: Patatin-like 34.5 51 0.0011 24.1 3.2 23 91-113 25-47 (204)
383 COG1506 DAP2 Dipeptidyl aminop 34.4 95 0.0021 28.4 5.3 43 24-66 551-598 (620)
384 PRK11320 prpB 2-methylisocitra 34.3 2.6E+02 0.0055 22.8 8.1 71 25-99 80-155 (292)
385 PRK10867 signal recognition pa 34.2 3.2E+02 0.0068 23.8 9.3 69 45-123 177-247 (433)
386 KOG0780 Signal recognition par 34.1 2.6E+02 0.0055 23.9 7.0 62 45-116 177-238 (483)
387 cd04951 GT1_WbdM_like This fam 33.3 2.7E+02 0.0058 22.8 8.8 35 27-61 3-39 (360)
388 KOG2182 Hydrolytic enzymes of 33.3 94 0.002 27.2 4.6 60 249-317 432-503 (514)
389 cd00951 KDGDH 5-dehydro-4-deox 32.9 2.6E+02 0.0057 22.5 8.8 87 36-129 19-106 (289)
390 cd00884 beta_CA_cladeB Carboni 32.8 62 0.0013 24.2 3.3 33 79-111 73-105 (190)
391 TIGR02883 spore_cwlD N-acetylm 32.8 1.2E+02 0.0025 22.7 4.8 14 54-68 2-15 (189)
392 PF04763 DUF562: Protein of un 32.5 1.5E+02 0.0032 20.7 4.6 39 23-61 16-61 (146)
393 PRK13982 bifunctional SbtC-lik 32.1 3.6E+02 0.0078 23.8 10.1 61 24-88 180-247 (475)
394 PRK00726 murG undecaprenyldiph 31.9 2.7E+02 0.0059 23.1 7.4 35 27-61 5-39 (357)
395 PF03033 Glyco_transf_28: Glyc 31.9 46 0.00099 22.9 2.4 33 27-59 2-34 (139)
396 PF03205 MobB: Molybdopterin g 31.9 1E+02 0.0022 21.6 4.1 41 26-66 1-43 (140)
397 PRK05665 amidotransferase; Pro 31.4 93 0.002 24.3 4.2 37 75-111 72-108 (240)
398 TIGR01361 DAHP_synth_Bsub phos 31.4 2.7E+02 0.0058 22.2 8.5 73 23-103 131-206 (260)
399 cd03145 GAT1_cyanophycinase Ty 31.4 1.6E+02 0.0035 22.5 5.5 38 23-60 28-67 (217)
400 PRK05723 flavodoxin; Provision 31.3 74 0.0016 22.7 3.4 60 32-96 59-121 (151)
401 PF13207 AAA_17: AAA domain; P 31.3 72 0.0016 21.2 3.3 37 27-65 1-40 (121)
402 PLN02748 tRNA dimethylallyltra 31.1 3.5E+02 0.0077 23.8 7.8 75 24-101 21-120 (468)
403 cd03131 GATase1_HTS Type 1 glu 31.1 24 0.00053 25.9 0.9 46 78-123 82-132 (175)
404 PF01580 FtsK_SpoIIIE: FtsK/Sp 31.0 1.9E+02 0.0041 21.7 5.8 42 24-65 38-84 (205)
405 PRK08622 galactose-6-phosphate 30.8 2.2E+02 0.0047 20.9 7.0 72 41-125 16-88 (171)
406 PF01656 CbiA: CobQ/CobB/MinD/ 30.8 73 0.0016 23.4 3.5 33 28-60 2-36 (195)
407 TIGR00959 ffh signal recogniti 30.7 3.6E+02 0.0078 23.4 8.7 71 44-124 175-247 (428)
408 PF07302 AroM: AroM protein; 30.6 1.2E+02 0.0026 23.4 4.4 39 25-63 152-190 (221)
409 PRK09019 translation initiatio 30.3 1.7E+02 0.0037 19.5 6.1 66 15-92 34-101 (108)
410 PRK06824 translation initiatio 30.2 1.8E+02 0.0039 19.8 5.6 68 14-93 43-112 (118)
411 PF02633 Creatininase: Creatin 30.1 2.6E+02 0.0057 21.7 6.8 71 41-112 43-120 (237)
412 PRK05368 homoserine O-succinyl 30.0 75 0.0016 25.8 3.5 34 80-113 121-154 (302)
413 PLN02154 carbonic anhydrase 30.0 76 0.0016 25.5 3.4 33 79-111 152-184 (290)
414 KOG4231 Intracellular membrane 29.9 65 0.0014 28.1 3.2 54 48-114 413-471 (763)
415 PRK13255 thiopurine S-methyltr 29.8 65 0.0014 24.7 3.1 16 44-59 52-67 (218)
416 PF08257 Sulfakinin: Sulfakini 29.4 26 0.00057 11.5 0.4 6 291-296 2-7 (9)
417 TIGR02113 coaC_strep phosphopa 29.4 2.1E+02 0.0046 21.1 5.5 36 24-59 112-150 (177)
418 PRK14729 miaA tRNA delta(2)-is 29.2 3.2E+02 0.0069 22.4 7.2 73 26-101 5-101 (300)
419 PRK03620 5-dehydro-4-deoxygluc 29.0 3.2E+02 0.0069 22.3 12.4 85 37-128 27-112 (303)
420 PRK14581 hmsF outer membrane N 28.9 73 0.0016 29.3 3.6 78 23-100 47-142 (672)
421 PRK13398 3-deoxy-7-phosphohept 28.8 3E+02 0.0066 22.0 8.2 74 23-103 133-208 (266)
422 PF01075 Glyco_transf_9: Glyco 28.8 94 0.002 24.1 3.9 35 23-57 104-143 (247)
423 cd07217 Pat17_PNPLA8_PNPLA9_li 28.6 57 0.0012 27.1 2.7 18 96-113 44-61 (344)
424 PF08902 DUF1848: Domain of un 28.6 3.1E+02 0.0067 22.0 7.7 63 26-94 50-113 (266)
425 PF06833 MdcE: Malonate decarb 28.6 1.4E+02 0.0031 23.1 4.6 58 52-112 66-128 (234)
426 PF07521 RMMBL: RNA-metabolisi 28.6 1E+02 0.0022 16.3 3.4 19 80-98 20-38 (43)
427 PF02089 Palm_thioest: Palmito 28.5 1.3E+02 0.0028 24.2 4.5 43 248-292 3-45 (279)
428 PRK07053 glutamine amidotransf 28.1 2.9E+02 0.0063 21.5 6.8 32 80-111 69-100 (234)
429 PRK10319 N-acetylmuramoyl-l-al 27.7 1.6E+02 0.0036 23.8 5.0 17 51-68 55-71 (287)
430 cd07213 Pat17_PNPLA8_PNPLA9_li 27.7 60 0.0013 26.2 2.7 19 96-114 37-55 (288)
431 PRK05571 ribose-5-phosphate is 27.7 2.3E+02 0.005 20.2 6.9 73 41-125 16-89 (148)
432 KOG1209 1-Acyl dihydroxyaceton 27.5 1.2E+02 0.0027 23.2 3.9 38 22-60 4-41 (289)
433 PLN03050 pyridoxine (pyridoxam 27.4 1.3E+02 0.0029 23.6 4.4 34 25-58 61-94 (246)
434 COG1576 Uncharacterized conser 27.4 2.4E+02 0.0052 20.3 5.2 46 51-108 67-113 (155)
435 PRK09004 FMN-binding protein M 27.4 1.8E+02 0.0039 20.5 4.8 6 94-99 84-89 (146)
436 COG4667 Predicted esterase of 27.3 79 0.0017 25.1 3.0 41 81-122 28-69 (292)
437 TIGR03607 patatin-related prot 27.3 1.1E+02 0.0023 28.7 4.3 34 79-112 49-85 (739)
438 PF06792 UPF0261: Uncharacteri 27.1 1.4E+02 0.0031 25.4 4.7 43 23-65 183-225 (403)
439 PF09695 YtfJ_HI0045: Bacteria 27.1 1.5E+02 0.0033 21.4 4.1 45 7-51 16-66 (160)
440 PF04084 ORC2: Origin recognit 27.0 3.7E+02 0.008 22.3 8.5 34 73-106 116-150 (326)
441 TIGR03840 TMPT_Se_Te thiopurin 26.7 75 0.0016 24.3 2.9 16 44-59 49-64 (213)
442 PRK00091 miaA tRNA delta(2)-is 26.7 3.1E+02 0.0068 22.5 6.5 64 25-90 4-89 (307)
443 cd03378 beta_CA_cladeC Carboni 26.6 1E+02 0.0023 22.1 3.4 31 79-109 78-108 (154)
444 PF06500 DUF1100: Alpha/beta h 26.5 42 0.00091 28.5 1.6 68 248-318 187-257 (411)
445 COG1255 Uncharacterized protei 26.3 65 0.0014 21.7 2.1 22 39-60 24-45 (129)
446 PF08433 KTI12: Chromatin asso 26.2 2E+02 0.0043 23.0 5.2 72 26-98 2-76 (270)
447 COG2513 PrpB PEP phosphonomuta 26.1 3.6E+02 0.0077 21.9 7.3 73 25-98 80-154 (289)
448 PF13728 TraF: F plasmid trans 25.4 1.9E+02 0.0041 22.2 4.8 43 26-68 124-167 (215)
449 TIGR02813 omega_3_PfaA polyket 25.4 75 0.0016 34.6 3.4 30 83-112 664-693 (2582)
450 PTZ00445 p36-lilke protein; Pr 25.0 2.9E+02 0.0063 21.3 5.5 24 38-61 29-52 (219)
451 PLN02752 [acyl-carrier protein 25.0 80 0.0017 26.2 3.0 19 95-113 126-144 (343)
452 KOG4287 Pectin acetylesterase 24.9 98 0.0021 25.6 3.2 15 248-262 267-281 (402)
453 PRK13753 dihydropteroate synth 24.7 3E+02 0.0065 22.2 5.9 58 47-110 160-219 (279)
454 PRK07933 thymidylate kinase; V 24.4 2E+02 0.0043 22.0 4.8 39 27-65 2-42 (213)
455 cd07199 Pat17_PNPLA8_PNPLA9_li 24.3 1.3E+02 0.0029 23.6 4.0 18 96-113 37-54 (258)
456 PRK08105 flavodoxin; Provision 24.0 1.3E+02 0.0028 21.3 3.6 21 75-95 99-119 (149)
457 PRK14194 bifunctional 5,10-met 23.8 1.5E+02 0.0032 24.2 4.1 34 80-113 143-182 (301)
458 PF02590 SPOUT_MTase: Predicte 23.8 2E+02 0.0044 20.7 4.4 64 51-130 67-130 (155)
459 PRK05920 aromatic acid decarbo 23.7 3.3E+02 0.0072 20.7 7.2 62 24-93 130-192 (204)
460 PRK14456 ribosomal RNA large s 23.7 4.6E+02 0.0099 22.3 7.5 75 27-110 283-359 (368)
461 cd01983 Fer4_NifH The Fer4_Nif 23.6 1.5E+02 0.0033 18.2 3.7 18 41-58 17-34 (99)
462 cd08185 Fe-ADH1 Iron-containin 23.6 4.6E+02 0.0099 22.2 7.5 64 25-99 26-91 (380)
463 PF10686 DUF2493: Protein of u 23.6 1.6E+02 0.0034 17.8 3.3 11 24-34 31-41 (71)
464 PF07380 Pneumo_M2: Pneumoviru 23.5 1.1E+02 0.0024 18.7 2.5 22 72-93 58-79 (89)
465 COG1856 Uncharacterized homolo 23.3 2.1E+02 0.0046 22.1 4.5 79 44-125 103-187 (275)
466 PLN02925 4-hydroxy-3-methylbut 23.2 2.3E+02 0.0049 26.3 5.4 42 52-100 630-671 (733)
467 COG0859 RfaF ADP-heptose:LPS h 23.1 1.5E+02 0.0033 24.5 4.3 34 24-57 175-214 (334)
468 TIGR03569 NeuB_NnaB N-acetylne 23.1 4.4E+02 0.0096 21.9 7.7 82 23-114 132-216 (329)
469 PRK11889 flhF flagellar biosyn 23.0 5.1E+02 0.011 22.5 7.6 78 37-124 305-385 (436)
470 PRK00771 signal recognition pa 22.9 5.2E+02 0.011 22.6 10.0 37 23-59 93-131 (437)
471 PRK06259 succinate dehydrogena 22.7 3.2E+02 0.0069 24.1 6.4 72 24-96 260-335 (486)
472 cd06296 PBP1_CatR_like Ligand- 22.6 3.7E+02 0.0081 20.9 6.5 58 44-103 71-128 (270)
473 TIGR00632 vsr DNA mismatch end 22.5 2E+02 0.0043 19.6 3.9 13 45-57 101-113 (117)
474 TIGR01120 rpiB ribose 5-phosph 22.4 2.9E+02 0.0064 19.6 7.7 72 41-125 15-87 (143)
475 COG0482 TrmU Predicted tRNA(5- 22.4 2.3E+02 0.005 23.8 4.9 60 25-92 5-64 (356)
476 PF12780 AAA_8: P-loop contain 22.3 4.1E+02 0.0089 21.3 6.9 54 26-93 33-87 (268)
477 KOG2214 Predicted esterase of 22.1 47 0.001 28.9 1.1 32 91-122 200-231 (543)
478 PRK06849 hypothetical protein; 22.1 3.2E+02 0.0069 23.2 6.1 61 40-101 17-85 (389)
479 PF03796 DnaB_C: DnaB-like hel 21.8 4E+02 0.0087 20.9 6.4 66 27-92 104-171 (259)
480 PRK08305 spoVFB dipicolinate s 21.7 3.4E+02 0.0073 20.5 5.4 68 24-96 121-191 (196)
481 PRK14582 pgaB outer membrane N 21.5 1.1E+02 0.0024 28.2 3.3 77 23-99 47-141 (671)
482 KOG2170 ATPase of the AAA+ sup 21.4 2.3E+02 0.0049 23.3 4.6 19 23-41 108-126 (344)
483 PRK03846 adenylylsulfate kinas 21.4 2.1E+02 0.0046 21.3 4.5 37 22-58 21-59 (198)
484 PF01118 Semialdhyde_dh: Semia 21.3 1.5E+02 0.0032 20.0 3.3 31 94-125 1-32 (121)
485 KOG1411 Aspartate aminotransfe 21.3 1.7E+02 0.0036 24.4 3.9 85 25-125 198-289 (427)
486 PRK02842 light-independent pro 21.2 2.9E+02 0.0063 23.9 5.7 42 24-65 97-143 (427)
487 PRK02399 hypothetical protein; 21.2 2.3E+02 0.0049 24.3 4.8 42 24-65 185-226 (406)
488 PF00091 Tubulin: Tubulin/FtsZ 21.2 2.5E+02 0.0054 21.4 4.8 16 91-106 122-137 (216)
489 TIGR00176 mobB molybdopterin-g 21.2 1.9E+02 0.0041 20.7 4.0 37 28-64 2-40 (155)
490 PRK13529 malate dehydrogenase; 21.1 2.2E+02 0.0048 25.6 4.9 80 26-109 296-399 (563)
491 PRK12724 flagellar biosynthesi 21.0 4.6E+02 0.01 22.8 6.6 70 45-124 293-367 (432)
492 PF13383 Methyltransf_22: Meth 21.0 1.9E+02 0.004 22.7 4.1 38 24-61 192-229 (242)
493 PF11022 DUF2611: Protein of u 20.7 84 0.0018 19.0 1.7 20 304-323 52-71 (71)
494 cd03379 beta_CA_cladeD Carboni 20.7 1.1E+02 0.0023 21.6 2.5 31 78-108 41-71 (142)
495 COG0505 CarA Carbamoylphosphat 20.6 3.4E+02 0.0074 22.8 5.5 65 41-111 191-267 (368)
496 PLN03093 Protein SENSITIVITY T 20.4 3.3E+02 0.007 21.8 5.2 15 92-106 197-211 (273)
497 cd07216 Pat17_PNPLA8_PNPLA9_li 20.4 74 0.0016 26.0 1.9 17 96-112 45-61 (309)
498 COG1763 MobB Molybdopterin-gua 20.3 2.4E+02 0.0052 20.5 4.2 38 26-63 3-42 (161)
499 PLN02840 tRNA dimethylallyltra 20.1 5.8E+02 0.013 22.2 7.2 30 72-101 88-119 (421)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=284.93 Aligned_cols=299 Identities=45% Similarity=0.817 Sum_probs=264.4
Q ss_pred cccceeEEEECCeeEEEeecC--CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 020621 2 IDINHRRVHTNGIWMHIAEKG--QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHL 79 (323)
Q Consensus 2 ~~~~~~~~~~~g~~~~~~~~g--~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 79 (323)
..++.++++.+|++++|.+.| ++|.++++||++.+..+|+.+...|+.+||+|+++|+||+|.|+.+.....|++..+
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l 99 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHH
Confidence 467889999999999999988 689999999999999999999999999999999999999999999987789999999
Q ss_pred HHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcc
Q 020621 80 VGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGV 159 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (323)
+.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.+.. .+...+.......+...++...++.+..
T Consensus 100 ~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~~ 177 (322)
T KOG4178|consen 100 VGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPGK 177 (322)
T ss_pred HHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccCc
Confidence 99999999999999999999999999999999999999999999998766 5666777778888899999999999999
Q ss_pred hhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhcccc
Q 020621 160 AEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWE 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
.+..+.....+.....++......+...+. .....+.|++.++++.+...+...++....++++.+...+.
T Consensus 178 ~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~ 248 (322)
T KOG4178|consen 178 PETELSKDDTEMLVKTFRTRKTPGPLIVPK---------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWE 248 (322)
T ss_pred chhhhccchhHHhHHhhhccccCCccccCC---------CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCch
Confidence 999998888888888777765554444333 11222678899999999999999999999999999999987
Q ss_pred ccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCc-eEEEecCCCcccchhchHHHHHHHHHHhhhcc
Q 020621 240 LTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDL-EVVVIRDAQHYIQLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 240 ~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 317 (323)
..++..+++++|+++|+|+.|.+.+.... .+.+.+..|+. +.++++|+||+++.|+|++|++.|.+|+++..
T Consensus 249 -a~~~~~~~i~iPv~fi~G~~D~v~~~p~~-----~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 249 -AAPWALAKITIPVLFIWGDLDPVLPYPIF-----GELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred -hccccccccccceEEEEecCcccccchhH-----HHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 66777779999999999999999988732 46677778885 78899999999999999999999999998753
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.2e-39 Score=259.03 Aligned_cols=279 Identities=19% Similarity=0.223 Sum_probs=181.5
Q ss_pred ccceeEEEECCeeEEEeecC-CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC-----CCCCcH
Q 020621 3 DINHRRVHTNGIWMHIAEKG-QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD-----PESYTI 76 (323)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g-~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-----~~~~~~ 76 (323)
+++.++++.+|.+++|...| ++|+|||+||+++++..|..+++.|.++ |+|+++|+||||.|+.+.. ...+++
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 56789999999999999998 5899999999999999999999999987 8999999999999986531 135899
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCC--chHHHHHhhhcceeeeec
Q 020621 77 FHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELK--PTEIFFKLYGEGLYISQF 154 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 154 (323)
+++++++.+++++++.++++|+||||||++++.+|.++|++|+++|++++.......... ........+....
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 160 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL----- 160 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH-----
Confidence 999999999999999999999999999999999999999999999999976432111000 0010000000000
Q ss_pred cCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhh
Q 020621 155 QEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAM 234 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
.........+........++.++...... ....+.+....+........ ....+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 217 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHD--------------------DSAVTDELVEAILRPGLEPG---AVDVFLDF 217 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccC--------------------hhhccHHHHHHHHhccCCch---HHHHHHHH
Confidence 00000000000000001111111100000 00112222222111111000 00111111
Q ss_pred hc-cccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHh
Q 020621 235 DK-NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHF 313 (323)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (323)
.. ...........++++|+++|+|++|.++|.+. .+.+.+..+++++++++++||++++|+|++|++.|.+|+
T Consensus 218 ~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~------~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (294)
T PLN02824 218 ISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVEL------GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFV 291 (294)
T ss_pred hccccccchHHHHhhcCCCeEEEEecCCCCCChHH------HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 00 00000000112799999999999999999865 455777778899999999999999999999999999999
Q ss_pred hhc
Q 020621 314 RKK 316 (323)
Q Consensus 314 ~~~ 316 (323)
+++
T Consensus 292 ~~~ 294 (294)
T PLN02824 292 ARH 294 (294)
T ss_pred hcC
Confidence 763
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.9e-38 Score=253.79 Aligned_cols=272 Identities=24% Similarity=0.364 Sum_probs=181.1
Q ss_pred ccceeEEEECCeeEEEeecCCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 020621 3 DINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD 82 (323)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (323)
.++.++++.+|.+++|...|++++|||+||++++...|..+++.|.++ ++|+++|+||||.|+.+. ..++++++++|
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~d 82 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARY 82 (295)
T ss_pred CCcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHH
Confidence 356778889999999999999999999999999999999999999998 699999999999998765 46899999999
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEK 162 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (323)
+.+++++++.++++++||||||.+|+.++.++|++|+++|++++...+..... .......... .+..+.....
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~ 155 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDD-FPPAVRELFQ------ALRSPGEGEE 155 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhh-cchhHHHHHH------HHhCcccccc
Confidence 99999999999999999999999999999999999999999998543311100 0000100000 0000000000
Q ss_pred hcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCc-chhhHHHHhhh------
Q 020621 163 SFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGF-TGALNYYRAMD------ 235 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 235 (323)
... ....++..++... ....++++....+...+..... .....+++...
T Consensus 156 ~~~--~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (295)
T PRK03592 156 MVL--EENVFIERVLPGS----------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPA 211 (295)
T ss_pred ccc--chhhHHhhcccCc----------------------ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcch
Confidence 000 0000111111000 0011223333333222211110 00111111100
Q ss_pred ------ccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHH
Q 020621 236 ------KNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEI 309 (323)
Q Consensus 236 ------~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (323)
...... ..++++|+|+|+|++|.++++... .+.+.+..+++++++++++||+++.|+|+++++.|
T Consensus 212 ~~~~~~~~~~~~----l~~i~~P~lii~G~~D~~~~~~~~-----~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i 282 (295)
T PRK03592 212 DVVALVEEYAQW----LATSDVPKLLINAEPGAILTTGAI-----RDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAI 282 (295)
T ss_pred hhHhhhhHhHHH----hccCCCCeEEEeccCCcccCcHHH-----HHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHH
Confidence 000011 127899999999999999965542 23334556789999999999999999999999999
Q ss_pred HHHhhhcc
Q 020621 310 LSHFRKKS 317 (323)
Q Consensus 310 ~~fl~~~~ 317 (323)
.+|+++..
T Consensus 283 ~~fl~~~~ 290 (295)
T PRK03592 283 AAWLRRLR 290 (295)
T ss_pred HHHHHHhc
Confidence 99998764
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.4e-38 Score=255.66 Aligned_cols=285 Identities=22% Similarity=0.270 Sum_probs=178.2
Q ss_pred eeEEEECCe-eEEEeecCCC------CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHH
Q 020621 6 HRRVHTNGI-WMHIAEKGQG------PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78 (323)
Q Consensus 6 ~~~~~~~g~-~~~~~~~g~~------~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~ 78 (323)
.+++..+|. +++|...|++ |+|||+||++++...|.+++..|.+ +|+|+++|+||||.|+.+.. ..+++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~ 140 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMET 140 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHH
Confidence 456777887 9999998866 9999999999999999999999987 59999999999999987643 4689999
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh-hCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeec-cC
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL-FRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQF-QE 156 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (323)
+++++.+++++++.++++|+||||||.+++.++. .+|++|+++|+++++..................+..++...+ ..
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 9999999999999999999999999999999887 479999999999986532111100000000000000000000 00
Q ss_pred CcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhc
Q 020621 157 PGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK 236 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+......+........++.++...... .....++....+........ ....+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 277 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGN--------------------KEAVDDELVEIIRGPADDEG---ALDAFVSIVT 277 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccC--------------------cccCCHHHHHHHHhhccCCC---hHHHHHHHHh
Confidence 000000011101111122211110000 00112222222211111111 1111111100
Q ss_pred c-ccccCccCCCccccceEEEecCCCCCCCCcCcc-ccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 237 N-WELTAPWQGAKICVPTKFIIGDKHMGFKSFGTE-NYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 237 ~-~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
. ..........++++|+|+|+|++|.++|++... ++ .+.+.+..|++++++++++||++++|+|+++++.|.+||+
T Consensus 278 ~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~--~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 278 GPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY--FSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLA 355 (360)
T ss_pred cCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH--HHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHH
Confidence 0 000000011278999999999999999876310 11 1345667899999999999999999999999999999998
Q ss_pred hcc
Q 020621 315 KKS 317 (323)
Q Consensus 315 ~~~ 317 (323)
+..
T Consensus 356 ~~~ 358 (360)
T PLN02679 356 QLP 358 (360)
T ss_pred hcC
Confidence 753
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.4e-37 Score=249.37 Aligned_cols=273 Identities=23% Similarity=0.319 Sum_probs=174.4
Q ss_pred ccceeEEEECC-----eeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCc
Q 020621 3 DINHRRVHTNG-----IWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYT 75 (323)
Q Consensus 3 ~~~~~~~~~~g-----~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~ 75 (323)
.+..+++++++ .+++|...|+ +|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.....++
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~ 97 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT 97 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC
Confidence 35678899988 8999999884 7999999999999999999999998878999999999999997654334689
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeecc
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQ 155 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (323)
++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....... . ....+..... +. . .
T Consensus 98 ~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~-~~~~~~~~~~---~~-~-~ 170 (302)
T PRK00870 98 YARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDG-P-MPDAFWAWRA---FS-Q-Y 170 (302)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccc-c-chHHHhhhhc---cc-c-c
Confidence 9999999999999999999999999999999999999999999999999864321110 0 0001100000 00 0 0
Q ss_pred CCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcch-hhHHHHhh
Q 020621 156 EPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTG-ALNYYRAM 234 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (323)
.+. ..+..++...... .........+........ . ......+ ..+....... ........
T Consensus 171 ~~~------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (302)
T PRK00870 171 SPV------------LPVGRLVNGGTVR----DLSDAVRAAYDAPFPDES-Y-KAGARAF-PLLVPTSPDDPAVAANRAA 231 (302)
T ss_pred Cch------------hhHHHHhhccccc----cCCHHHHHHhhcccCChh-h-hcchhhh-hhcCCCCCCCcchHHHHHH
Confidence 000 0000000000000 000000000000000000 0 0000000 0000000000 00000000
Q ss_pred hccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCce---EEEecCCCcccchhchHHHHHHHHH
Q 020621 235 DKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLE---VVVIRDAQHYIQLEKAEQITEEILS 311 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~ 311 (323)
+ ... .++++|+++|+|++|.++|... +.+.+..++++ +++++++||++++|+|++|++.|.+
T Consensus 232 ---~-~~l----~~i~~P~lii~G~~D~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 296 (302)
T PRK00870 232 ---W-AVL----ERWDKPFLTAFSDSDPITGGGD-------AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLE 296 (302)
T ss_pred ---H-Hhh----hcCCCceEEEecCCCCcccCch-------HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHH
Confidence 0 001 1899999999999999998643 45677777765 8899999999999999999999999
Q ss_pred Hhhhc
Q 020621 312 HFRKK 316 (323)
Q Consensus 312 fl~~~ 316 (323)
|++++
T Consensus 297 fl~~~ 301 (302)
T PRK00870 297 FIRAT 301 (302)
T ss_pred HHhcC
Confidence 99865
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.5e-37 Score=244.78 Aligned_cols=263 Identities=19% Similarity=0.224 Sum_probs=174.8
Q ss_pred cceeEEEECCeeEEEeec--CCC-CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 020621 4 INHRRVHTNGIWMHIAEK--GQG-PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLV 80 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~--g~~-~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (323)
+-.++++++|.+++|... +++ ++|||+||++++...|.++++.|.+. |+|+++|+||||.|+.+. ..+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~ 78 (276)
T TIGR02240 2 FIFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLA 78 (276)
T ss_pred eeEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHH
Confidence 346788899999999764 334 79999999999999999999999875 999999999999998654 468999999
Q ss_pred HHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcch
Q 020621 81 GDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVA 160 (323)
Q Consensus 81 ~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (323)
+++.+++++++.++++|+||||||.+++.+|.++|++|+++|+++++.......... ........ .
T Consensus 79 ~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~----------~--- 144 (276)
T TIGR02240 79 KLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP-KVLMMMAS----------P--- 144 (276)
T ss_pred HHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch-hHHHHhcC----------c---
Confidence 999999999999999999999999999999999999999999999876431111000 00000000 0
Q ss_pred hhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCc-chhhHHHHhhhcccc
Q 020621 161 EKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGF-TGALNYYRAMDKNWE 239 (323)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (323)
...............++..... ...+....+......... ...............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (276)
T TIGR02240 145 RRYIQPSHGIHIAPDIYGGAFR------------------------RDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSI 200 (276)
T ss_pred hhhhccccccchhhhhccceee------------------------ccchhhhhhhhhcccCCCchHHHHHHHHcCCchh
Confidence 0000000000000000000000 000000000000000000 000000010100000
Q ss_pred ccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhccc
Q 020621 240 LTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKKSI 318 (323)
Q Consensus 240 ~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 318 (323)
.. ..++++|+++|+|++|+++|++. .+.+.+..++++++++++ ||+++.++|+++++.|.+|+++...
T Consensus 201 ~~----l~~i~~P~lii~G~~D~~v~~~~------~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 201 HW----LHKIQQPTLVLAGDDDPIIPLIN------MRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred hH----hhcCCCCEEEEEeCCCCcCCHHH------HHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 11 12899999999999999999876 466778889999999986 9999999999999999999998643
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.6e-37 Score=244.86 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=175.4
Q ss_pred ccceeEEEECCeeEEEeecCCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 020621 3 DINHRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD 82 (323)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (323)
.+++++++++|.+++|...|++|+|||+||++.+...|..+++.|.+. |+|+++|+||||.|+.+.+ ..++.++++++
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 90 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARV 90 (286)
T ss_pred cccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHH
Confidence 477899999999999999999999999999999999999999999875 9999999999999987653 35789999999
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEK 162 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (323)
+.+++++++.++++++||||||.+++.++..+|++|+++|++++...+... .....+...... .+ ....
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~--------~~-~~~~ 159 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT--LAMKAFSRVMSS--------PP-VQYA 159 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc--hhHHHHHHHhcc--------cc-chhh
Confidence 999999999999999999999999999999999999999998765422110 000001000000 00 0000
Q ss_pred hcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccC-----------cchhhHHH
Q 020621 163 SFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATG-----------FTGALNYY 231 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 231 (323)
.+ ........++..... ...+.+....+........ +.......
T Consensus 160 ~~---~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (286)
T PRK03204 160 IL---RRNFFVERLIPAGTE----------------------HRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLL 214 (286)
T ss_pred hh---hhhHHHHHhcccccc----------------------CCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHH
Confidence 00 001111111111000 0011111111111000000 00000000
Q ss_pred HhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHH
Q 020621 232 RAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILS 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 311 (323)
..+.... .. ..+++|+++|+|++|.++++... .+.+++..|++++++++++||++++|+|+++++.|.+
T Consensus 215 ~~~~~~~--~~----~~~~~PtliI~G~~D~~~~~~~~-----~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~ 283 (286)
T PRK03204 215 ARLAREV--PA----TLGTKPTLLVWGMKDVAFRPKTI-----LPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIE 283 (286)
T ss_pred HHhhhhh--hh----hcCCCCeEEEecCCCcccCcHHH-----HHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHH
Confidence 1100000 00 02389999999999999876532 3667889999999999999999999999999999999
Q ss_pred Hh
Q 020621 312 HF 313 (323)
Q Consensus 312 fl 313 (323)
||
T Consensus 284 ~~ 285 (286)
T PRK03204 284 RF 285 (286)
T ss_pred hc
Confidence 97
No 8
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.2e-35 Score=232.41 Aligned_cols=246 Identities=15% Similarity=0.159 Sum_probs=160.3
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-ccEEEEEechHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE-EQAFVVGHDWGA 104 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG~S~Gg 104 (323)
+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.... ..++++++++|+.++++.++. ++++|+||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999987789999999999999976542 367899999999999999987 499999999999
Q ss_pred HHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcc--eeeeeccCCcchhhhccc-ccHHHHHHHHHhhcC
Q 020621 105 QIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEG--LYISQFQEPGVAEKSFSK-YDSLTVLKKLLLVNA 181 (323)
Q Consensus 105 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (323)
.+++.++.++|++|+++|++++........ ............ .+...+.... ...... ..........+..
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 157 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSI--ISPRLKNVMEGTEKIWDYTFGEGP--DKPPTGIMMKPEFVRHYYYN-- 157 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCC--ccHHHHhhhhccccceeeeeccCC--CCCcchhhcCHHHHHHHHhc--
Confidence 999999999999999999999864321110 011111100000 0000000000 000000 0000011010000
Q ss_pred CCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCC
Q 020621 182 PDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKH 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D 261 (323)
....+........+........ ..... ..... ..+++|+++|+|++|
T Consensus 158 ------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~----~~i~vP~lvi~g~~D 204 (255)
T PLN02965 158 ------------------------QSPLEDYTLSSKLLRPAPVRAF-QDLDK----LPPNP----EAEKVPRVYIKTAKD 204 (255)
T ss_pred ------------------------CCCHHHHHHHHHhcCCCCCcch-hhhhh----ccchh----hcCCCCEEEEEcCCC
Confidence 0001111111111111111110 00000 00011 168999999999999
Q ss_pred CCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhcc
Q 020621 262 MGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 317 (323)
.++|+.. .+.+++..|++++++++++||++++|+|++|++.|.+|++..+
T Consensus 205 ~~~~~~~------~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 205 NLFDPVR------QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CCCCHHH------HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 9999875 5778899999999999999999999999999999999998764
No 9
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.4e-35 Score=244.50 Aligned_cols=287 Identities=17% Similarity=0.228 Sum_probs=172.9
Q ss_pred cceeEEEECCeeEEEeecCC-----CCeEEEEcccCCCchhHHH-HHHhhh---hcCcEEEeeCCCCCCCCCCCCCCCCC
Q 020621 4 INHRRVHTNGIWMHIAEKGQ-----GPLVLLIHGFPELWSCWKY-QINHLA---EHGYHVVAPDMRGYGDSDSPQDPESY 74 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~-----~~~lv~~hG~~~~~~~~~~-~~~~l~---~~G~~vi~~d~~G~G~s~~~~~~~~~ 74 (323)
+...+++++|.+++|...++ +|+|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+.+ ..+
T Consensus 176 ~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~y 254 (481)
T PLN03087 176 FCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLY 254 (481)
T ss_pred eeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcC
Confidence 45677888999999999873 3799999999999999985 446655 3579999999999999986643 568
Q ss_pred cHHHHHHHHH-HHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHh-hhcceeee
Q 020621 75 TIFHLVGDLI-GLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKL-YGEGLYIS 152 (323)
Q Consensus 75 ~~~~~~~~i~-~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (323)
+++++++++. .++++++.++++++||||||++++.+|.++|++|+++|+++++................. .....+
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 332 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVW-- 332 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccC--
Confidence 9999999994 899999999999999999999999999999999999999998654322111101111000 000000
Q ss_pred eccCCcchhhhcccccHHHHHHHHHhhcCCCCc-CCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHH
Q 020621 153 QFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDII-AAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYY 231 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (323)
.+ .........++........ ........++.+.... ..........+.+........+.......
T Consensus 333 ---~~---------~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~~~~l~~~i 399 (481)
T PLN03087 333 ---PP---------IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLL-TRNRMRTFLIEGFFCHTHNAAWHTLHNII 399 (481)
T ss_pred ---Cc---------cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHh-hhhhhhHHHHHHHHhccchhhHHHHHHHH
Confidence 00 0000000111000000000 0000000000000000 00000000000000000000000000000
Q ss_pred Hh----hhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch-hchHHHH
Q 020621 232 RA----MDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL-EKAEQIT 306 (323)
Q Consensus 232 ~~----~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~ 306 (323)
.. .+....... .++++|+|+|+|++|.++|++. .+.+++..|++++++++++||++++ ++|++++
T Consensus 400 ~~~~~~l~~~l~~l~----~~I~vPtLII~Ge~D~ivP~~~------~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa 469 (481)
T PLN03087 400 CGSGSKLDGYLDHVR----DQLKCDVAIFHGGDDELIPVEC------SYAVKAKVPRARVKVIDDKDHITIVVGRQKEFA 469 (481)
T ss_pred hchhhhhhhHHHHHH----HhCCCCEEEEEECCCCCCCHHH------HHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHH
Confidence 00 000000000 1689999999999999999886 4678889999999999999999885 9999999
Q ss_pred HHHHHHhhhc
Q 020621 307 EEILSHFRKK 316 (323)
Q Consensus 307 ~~i~~fl~~~ 316 (323)
+.|.+|++..
T Consensus 470 ~~L~~F~~~~ 479 (481)
T PLN03087 470 RELEEIWRRS 479 (481)
T ss_pred HHHHHHhhcc
Confidence 9999999754
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.6e-35 Score=234.70 Aligned_cols=266 Identities=24% Similarity=0.273 Sum_probs=166.7
Q ss_pred cceeEEEEC-----CeeEEEeecCCCCeEEEEcccCCCchhHHHH---HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCc
Q 020621 4 INHRRVHTN-----GIWMHIAEKGQGPLVLLIHGFPELWSCWKYQ---INHLAEHGYHVVAPDMRGYGDSDSPQDPESYT 75 (323)
Q Consensus 4 ~~~~~~~~~-----g~~~~~~~~g~~~~lv~~hG~~~~~~~~~~~---~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~ 75 (323)
.+.+++.++ |.+++|...|++|+|||+||++.+...|..+ +..|.+.||+|+++|+||||.|+........+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84 (282)
T ss_pred CcceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc
Confidence 345666664 6779999999999999999999988888653 45566678999999999999998654212222
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCC-CCchHHHHHhhhcceeeeec
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPE-LKPTEIFFKLYGEGLYISQF 154 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (323)
..+++++.+++++++.++++++||||||++++.+|.++|++|+++|+++++....... ............
T Consensus 85 -~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-------- 155 (282)
T TIGR03343 85 -LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFK-------- 155 (282)
T ss_pred -chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHH--------
Confidence 2568999999999999999999999999999999999999999999999764321100 000011110000
Q ss_pred cCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhh
Q 020621 155 QEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAM 234 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
.+.... ...+..++...... ....+.+........... .......+....
T Consensus 156 --------~~~~~~-~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 205 (282)
T TIGR03343 156 --------LYAEPS-YETLKQMLNVFLFD--------------------QSLITEELLQGRWENIQR-QPEHLKNFLISS 205 (282)
T ss_pred --------HhcCCC-HHHHHHHHhhCccC--------------------cccCcHHHHHhHHHHhhc-CHHHHHHHHHhc
Confidence 000000 00111111100000 000111111100000000 000000000000
Q ss_pred hc--cccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHH
Q 020621 235 DK--NWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSH 312 (323)
Q Consensus 235 ~~--~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 312 (323)
.. ...........++++|+|+++|++|.+++++. .+.+++..|++++++++++||+++.|+|++|++.|.+|
T Consensus 206 ~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~------~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~f 279 (282)
T TIGR03343 206 QKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDH------GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDF 279 (282)
T ss_pred cccccccchHHHHHhhCCCCEEEEEccCCCcCCchh------HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHH
Confidence 00 00000000112899999999999999999875 46778888999999999999999999999999999999
Q ss_pred hh
Q 020621 313 FR 314 (323)
Q Consensus 313 l~ 314 (323)
|+
T Consensus 280 l~ 281 (282)
T TIGR03343 280 LR 281 (282)
T ss_pred hh
Confidence 96
No 11
>PLN02578 hydrolase
Probab=100.00 E-value=7.7e-35 Score=237.43 Aligned_cols=282 Identities=23% Similarity=0.260 Sum_probs=174.6
Q ss_pred eeEEEECCeeEEEeecCCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 020621 6 HRRVHTNGIWMHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIG 85 (323)
Q Consensus 6 ~~~~~~~g~~~~~~~~g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~ 85 (323)
.++++.+|.+++|...|++|+|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++..++++++.+
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred ceEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 356777999999999999999999999999999999999999875 999999999999998765 57899999999999
Q ss_pred HHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcc
Q 020621 86 LLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFS 165 (323)
Q Consensus 86 ~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (323)
+++.+..++++++|||+||.+++.+|.++|++|+++|+++++............... .........+.. .....+
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~- 219 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIV--VEETVLTRFVVK--PLKEWF- 219 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccc--cccchhhHHHhH--HHHHHH-
Confidence 999999899999999999999999999999999999999876532211100000000 000000000000 000000
Q ss_pred cccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhc----ccccc
Q 020621 166 KYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK----NWELT 241 (323)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 241 (323)
......+....... ...+...............+.....+...... ......+++.... .....
T Consensus 220 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T PLN02578 220 ----QRVVLGFLFWQAKQ------PSRIESVLKSVYKDKSNVDDYLVESITEPAAD--PNAGEVYYRLMSRFLFNQSRYT 287 (354)
T ss_pred ----HHHHHHHHHHHhcC------HHHHHHHHHHhcCCcccCCHHHHHHHHhcccC--CchHHHHHHHHHHHhcCCCCCC
Confidence 00000000000000 00000000000000000111111111111100 0011111111000 00000
Q ss_pred CccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 242 APWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 242 ~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
......++++|+++|+|++|.+++.+. .+.+.+..|+++++++ ++||+++.|+|+++++.|.+|++
T Consensus 288 ~~~~l~~i~~PvLiI~G~~D~~v~~~~------~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 288 LDSLLSKLSCPLLLLWGDLDPWVGPAK------AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHhhcCCCCEEEEEeCCCCCCCHHH------HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 001112799999999999999998775 4667888899999999 58999999999999999999986
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=6.7e-35 Score=232.09 Aligned_cols=268 Identities=23% Similarity=0.332 Sum_probs=175.2
Q ss_pred ceeEEEECCeeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 020621 5 NHRRVHTNGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD 82 (323)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (323)
..++++++|.+++|...|+ +|+|||+||++++...|..+++.|.+. |+|+++|+||||.|..+.. ..+++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 84 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFR-FRFTLPSMAED 84 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccc-cCCCHHHHHHH
Confidence 3578899999999999884 789999999999999999999999875 9999999999999987653 36899999999
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCch-HHHHHhhhcceeeeeccCCcchh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPT-EIFFKLYGEGLYISQFQEPGVAE 161 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 161 (323)
+.+++++++.++++|+||||||++++.+|.++|++++++|++++............ ......... ..... ....
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~ 159 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC----NPFTP-PMMS 159 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh----cccch-HHHH
Confidence 99999999989999999999999999999999999999999987654321110000 000000000 00000 0000
Q ss_pred hhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccC-cchhhHHHHhhhccccc
Q 020621 162 KSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATG-FTGALNYYRAMDKNWEL 240 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (323)
.... ....+..++.. . ...........+........ ...............
T Consensus 160 ~~~~---~~~~~~~~~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 211 (278)
T TIGR03056 160 RGAA---DQQRVERLIRD--------------------T---GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAP-- 211 (278)
T ss_pred hhcc---cCcchhHHhhc--------------------c---ccccccchhhHHHHhhcCchhhhHHHHHhhcccccc--
Confidence 0000 00000000000 0 00001111111111111000 000011111100000
Q ss_pred cCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 241 TAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 241 ~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
......++++|+++|+|++|.++|++. .+.+.+..+++++++++++||+++.++|+++++.|.+|++
T Consensus 212 -~~~~~~~i~~P~lii~g~~D~~vp~~~------~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 212 -LNRDLPRITIPLHLIAGEEDKAVPPDE------SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred -hhhhcccCCCCEEEEEeCCCcccCHHH------HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 000112789999999999999999875 4667777899999999999999999999999999999985
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.2e-34 Score=227.27 Aligned_cols=243 Identities=16% Similarity=0.234 Sum_probs=156.0
Q ss_pred EEEeecCCCC-eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCcc
Q 020621 16 MHIAEKGQGP-LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQ 94 (323)
Q Consensus 16 ~~~~~~g~~~-~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 94 (323)
++|...|+++ +|||+||++++...|..+.+.|.+. |+|+++|+||||.|... ..++++++++++.+ ++.++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~l~~----~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF---GALSLADMAEAVLQ----QAPDK 75 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC---CCCCHHHHHHHHHh----cCCCC
Confidence 6788888886 6999999999999999999999886 99999999999999753 24677777777654 45689
Q ss_pred EEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCC--CchHHHHHhhhcceeeeeccCCcchhhhcccccHHHH
Q 020621 95 AFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPEL--KPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTV 172 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (323)
++++||||||.+|+.+|.++|++|+++|++++++....... .........+. ..+. ......
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~~~~~ 139 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ---------------QQLS-DDFQRT 139 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHH---------------HHHH-hchHHH
Confidence 99999999999999999999999999999987543211100 00000000000 0000 001111
Q ss_pred HHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcch------hhHHHHhhhccccccCccCC
Q 020621 173 LKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTG------ALNYYRAMDKNWELTAPWQG 246 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 246 (323)
...++........ ........+........... ....+...+ .....
T Consensus 140 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l---- 192 (256)
T PRK10349 140 VERFLALQTMGTE---------------------TARQDARALKKTVLALPMPEVDVLNGGLEILKTVD--LRQPL---- 192 (256)
T ss_pred HHHHHHHHHccCc---------------------hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCc--cHHHH----
Confidence 2222111000000 00000011111110000000 000111111 11111
Q ss_pred CccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 247 AKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 247 ~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
.++++|+|+|+|++|.++|.+. .+.+.+..+++++++++++||++++|+|++|++.+.+|-++
T Consensus 193 ~~i~~P~lii~G~~D~~~~~~~------~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 193 QNVSMPFLRLYGYLDGLVPRKV------VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred hhcCCCeEEEecCCCccCCHHH------HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 1899999999999999998765 46677888999999999999999999999999999998643
No 14
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=236.23 Aligned_cols=283 Identities=14% Similarity=0.109 Sum_probs=164.4
Q ss_pred EECCeeEEEeecCC---------CCeEEEEcccCCCchhHH--HHHHhh-------hhcCcEEEeeCCCCCCCCCCCCCC
Q 020621 10 HTNGIWMHIAEKGQ---------GPLVLLIHGFPELWSCWK--YQINHL-------AEHGYHVVAPDMRGYGDSDSPQDP 71 (323)
Q Consensus 10 ~~~g~~~~~~~~g~---------~~~lv~~hG~~~~~~~~~--~~~~~l-------~~~G~~vi~~d~~G~G~s~~~~~~ 71 (323)
+++|.+++|...|+ +|+|||+||++++...|. .+...| ..++|+||++|+||||.|+.+.+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 45789999999986 789999999999988885 444444 234699999999999999865421
Q ss_pred -----CCCcHHHHHHHHHHHH-HHhCCccEE-EEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCC-chHHHHH
Q 020621 72 -----ESYTIFHLVGDLIGLL-DELGEEQAF-VVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELK-PTEIFFK 143 (323)
Q Consensus 72 -----~~~~~~~~~~~i~~~l-~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~ 143 (323)
..++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.......... .......
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 2578999999988855 889999985 8999999999999999999999999999875422111000 0000000
Q ss_pred hhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccC
Q 020621 144 LYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATG 223 (323)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (323)
...... .+...... ........... .+...... ....... .. .....................
T Consensus 206 ~~~~~~---~~~~~~~~---~~~~~~~~~~~-~~~~~~~~-----~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T PRK06489 206 SIRNDP---AWNNGNYT---TQPPSLKRANP-MFAIATSG-----GTLAYQA--QA---PTRAAADKLVDERLAAPVTAD 268 (360)
T ss_pred HHHhCC---CCCCCCCC---CCHHHHHHHHH-HHHHHHhC-----CHHHHHH--hc---CChHHHHHHHHHHHHhhhhcC
Confidence 000000 00000000 00000000000 00000000 0000000 00 000000001111111111111
Q ss_pred cchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCC----Ccccch
Q 020621 224 FTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDA----QHYIQL 299 (323)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----gH~~~~ 299 (323)
...+...............+.+|++|+|+|+|++|.++|++... .+.+++..|++++++++++ ||+++
T Consensus 269 ---~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~----~~~la~~ip~a~l~~i~~a~~~~GH~~~- 340 (360)
T PRK06489 269 ---ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGV----MEAALKRVKHGRLVLIPASPETRGHGTT- 340 (360)
T ss_pred ---HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHH----HHHHHHhCcCCeEEEECCCCCCCCcccc-
Confidence 11111111100000000111289999999999999999876410 1567888999999999996 99997
Q ss_pred hchHHHHHHHHHHhhhcc
Q 020621 300 EKAEQITEEILSHFRKKS 317 (323)
Q Consensus 300 ~~~~~~~~~i~~fl~~~~ 317 (323)
++|++|++.|.+||+++.
T Consensus 341 e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 341 GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred cCHHHHHHHHHHHHHhcc
Confidence 899999999999998764
No 15
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=228.30 Aligned_cols=265 Identities=22% Similarity=0.286 Sum_probs=170.9
Q ss_pred eEEEECCeeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC--CCCCcHHHHHHH
Q 020621 7 RRVHTNGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD--PESYTIFHLVGD 82 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~ 82 (323)
..++.+|.+++|...|+ +|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+.. ...+++++++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 34567999999999884 68999999999999999999999987 59999999999999987653 136899999999
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEK 162 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (323)
+.+++++++.++++|+|||+||++++.+|.++|++|+++|+++++....... ....+... ... . ...
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~--~p~~l~~~-~~~-l---------~~~ 253 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAK--LPSTLSEF-SNF-L---------LGE 253 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccccc--chHHHHHH-HHH-H---------hhh
Confidence 9999999999999999999999999999999999999999999875321100 00000000 000 0 000
Q ss_pred hcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcc--hhhHHHHhhhcccc-
Q 020621 163 SFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFT--GALNYYRAMDKNWE- 239 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 239 (323)
.+.. .........+.. . .......+....+...+...... .....++.+.....
T Consensus 254 ~~~~-~~~~~~~~~~~~--~--------------------~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~ 310 (383)
T PLN03084 254 IFSQ-DPLRASDKALTS--C--------------------GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKK 310 (383)
T ss_pred hhhc-chHHHHhhhhcc--c--------------------CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccch
Confidence 0000 000000000000 0 00001122222222111111100 00000111100000
Q ss_pred ----ccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 240 ----LTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 240 ----~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
........++++|+++|+|++|.+++.+.. +.+.+. +++++++++++||+++.|+|+++++.|.+||.+
T Consensus 311 ~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~------~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 311 YIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV------EDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH------HHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 000000016899999999999999987653 444554 478999999999999999999999999999863
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.9e-34 Score=231.57 Aligned_cols=262 Identities=16% Similarity=0.286 Sum_probs=163.8
Q ss_pred eEEEECCeeEEEeecCC-----CCeEEEEcccCCCchh-HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 020621 7 RRVHTNGIWMHIAEKGQ-----GPLVLLIHGFPELWSC-WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLV 80 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~-----~~~lv~~hG~~~~~~~-~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (323)
.+++.+|.+++|..+++ .++|||+||++++... |..+++.|+++||+|+++|+||||.|+.... ...++++++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~ 143 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLV 143 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHH
Confidence 34455999999988752 4689999999988654 6888999998899999999999999986532 345889999
Q ss_pred HHHHHHHHHhCCc------cEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeec
Q 020621 81 GDLIGLLDELGEE------QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQF 154 (323)
Q Consensus 81 ~~i~~~l~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (323)
+|+.++++.+..+ +++|+||||||++++.++.++|++++++|+++|........... ........
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~-~~~~~~~~-------- 214 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPP-PLVLQILI-------- 214 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCc-hHHHHHHH--------
Confidence 9999999887543 79999999999999999999999999999999865432111000 00000000
Q ss_pred cCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHH-Hhhc-ccCcchhhHHHH
Q 020621 155 QEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWA-EKFN-ATGFTGALNYYR 232 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 232 (323)
.+.... +....... ..+.... ... ........+. ..+. ..........++
T Consensus 215 -----------------~~~~~~----p~~~~~~~-~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 266 (349)
T PLN02385 215 -----------------LLANLL----PKAKLVPQ-KDLAELA-----FRD-LKKRKMAEYNVIAYKDKPRLRTAVELLR 266 (349)
T ss_pred -----------------HHHHHC----CCceecCC-Ccccccc-----ccC-HHHHHHhhcCcceeCCCcchHHHHHHHH
Confidence 000000 00000000 0000000 000 0000000000 0000 000011111111
Q ss_pred hhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcC--CCceEEEecCCCcccchhchHH----HH
Q 020621 233 AMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV--PDLEVVVIRDAQHYIQLEKAEQ----IT 306 (323)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~----~~ 306 (323)
... ....... ++++|+|+|+|++|.++|++.. +.+.+.. +++++++++++||.++.++|++ +.
T Consensus 267 ~~~-~~~~~l~----~i~~P~Lii~G~~D~vv~~~~~------~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~ 335 (349)
T PLN02385 267 TTQ-EIEMQLE----EVSLPLLILHGEADKVTDPSVS------KFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVL 335 (349)
T ss_pred HHH-HHHHhcc----cCCCCEEEEEeCCCCccChHHH------HHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHH
Confidence 110 0011111 7999999999999999998763 4455544 5689999999999999999876 88
Q ss_pred HHHHHHhhhcc
Q 020621 307 EEILSHFRKKS 317 (323)
Q Consensus 307 ~~i~~fl~~~~ 317 (323)
+.|.+||+++.
T Consensus 336 ~~i~~wL~~~~ 346 (349)
T PLN02385 336 DDIISWLDSHS 346 (349)
T ss_pred HHHHHHHHHhc
Confidence 89999998764
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.9e-33 Score=220.76 Aligned_cols=235 Identities=19% Similarity=0.247 Sum_probs=157.7
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEech
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDW 102 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~ 102 (323)
++|+|||+||++++...|..++..|.+. |+|+++|+||||.|.... .++++++++|+.+++++++.++++|+||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECH
Confidence 4689999999999999999999999875 999999999999998643 579999999999999999999999999999
Q ss_pred HHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCC
Q 020621 103 GAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAP 182 (323)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (323)
||.+++.+|.++|++|+++|++++.+..... .........+.... ..... ........+...
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~-- 152 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHV--RRHDEIFAAINAVS-----------EAGAT---TRQQAAAIMRQH-- 152 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecCCCCccc--hhhHHHHHHHHHhh-----------hcccc---cHHHHHHHHHHh--
Confidence 9999999999999999999999864432111 00000000000000 00000 000000000000
Q ss_pred CCcCCCcchhhhccccCCCCCCCCCCHHHHHHHH-HhhcccCcc----hhhHHHHhhhccccccCccCCCccccceEEEe
Q 020621 183 DIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWA-EKFNATGFT----GALNYYRAMDKNWELTAPWQGAKICVPTKFII 257 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~ 257 (323)
...+....+. ..+...... .....+..... .... ..+++|+|+|+
T Consensus 153 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~P~l~i~ 202 (255)
T PRK10673 153 ------------------------LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG--WEKI----PAWPHPALFIR 202 (255)
T ss_pred ------------------------cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhC--Cccc----CCCCCCeEEEE
Confidence 0000011111 000000000 00001111111 0111 17899999999
Q ss_pred cCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 258 GDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 258 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
|++|..++.+. .+.+++..+++++++++++||++++++|+++++.|.+||++
T Consensus 203 G~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 203 GGNSPYVTEAY------RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCCCCHHH------HHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999998765 46678888999999999999999999999999999999975
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=229.48 Aligned_cols=279 Identities=18% Similarity=0.212 Sum_probs=165.9
Q ss_pred eeEEEECCeeEEEeecCC-CCeEEEEcccCCCch------------hHHHHHH---hhhhcCcEEEeeCCCCCCCCCCCC
Q 020621 6 HRRVHTNGIWMHIAEKGQ-GPLVLLIHGFPELWS------------CWKYQIN---HLAEHGYHVVAPDMRGYGDSDSPQ 69 (323)
Q Consensus 6 ~~~~~~~g~~~~~~~~g~-~~~lv~~hG~~~~~~------------~~~~~~~---~l~~~G~~vi~~d~~G~G~s~~~~ 69 (323)
-++.+++|.+++|...|+ ++++||+||++++.. .|.+++. .|...+|+||++|+||||.|..
T Consensus 38 ~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-- 115 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD-- 115 (343)
T ss_pred ecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--
Confidence 344556899999999995 767888877777655 6888886 5743359999999999998842
Q ss_pred CCCCCcHHHHHHHHHHHHHHhCCccE-EEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcc
Q 020621 70 DPESYTIFHLVGDLIGLLDELGEEQA-FVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEG 148 (323)
Q Consensus 70 ~~~~~~~~~~~~~i~~~l~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (323)
..++..++++|+.++++++++++. +|+||||||++|+.+|.++|++|+++|++++...... ............
T Consensus 116 --~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~----~~~~~~~~~~~~ 189 (343)
T PRK08775 116 --VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHP----YAAAWRALQRRA 189 (343)
T ss_pred --CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCH----HHHHHHHHHHHH
Confidence 356889999999999999999775 7999999999999999999999999999998643211 000111000000
Q ss_pred eeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCC-CCCCCCHHHHHHHHH-----hhccc
Q 020621 149 LYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSS-LPEWVNLEDLQSWAE-----KFNAT 222 (323)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~ 222 (323)
......... . .......+.+...... ....+...+..... ...... .....+.. .....
T Consensus 190 ~~~~~~~~~-------~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~ 254 (343)
T PRK08775 190 VALGQLQCA-------E-KHGLALARQLAMLSYR------TPEEFEERFDAPPEVINGRVR-VAAEDYLDAAGAQYVART 254 (343)
T ss_pred HHcCCCCCC-------c-hhHHHHHHHHHHHHcC------CHHHHHHHhCCCccccCCCcc-chHHHHHHHHHHHHHHhc
Confidence 000000000 0 0000000000000000 00000000000000 000000 01111111 11111
Q ss_pred CcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcC-CCceEEEecC-CCcccchh
Q 020621 223 GFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV-PDLEVVVIRD-AQHYIQLE 300 (323)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~ 300 (323)
............+.. .... .++++|+|+|+|++|.++|++. .+.+.+.. |+++++++++ +||++++|
T Consensus 255 ~~~~~~~~~~~~~~~-~~~l----~~I~~PtLvi~G~~D~~~p~~~------~~~~~~~i~p~a~l~~i~~~aGH~~~lE 323 (343)
T PRK08775 255 PVNAYLRLSESIDLH-RVDP----EAIRVPTVVVAVEGDRLVPLAD------LVELAEGLGPRGSLRVLRSPYGHDAFLK 323 (343)
T ss_pred ChhHHHHHHHHHhhc-CCCh----hcCCCCeEEEEeCCCEeeCHHH------HHHHHHHcCCCCeEEEEeCCccHHHHhc
Confidence 111111111111111 1111 2899999999999999999765 35566655 6899999985 99999999
Q ss_pred chHHHHHHHHHHhhhccc
Q 020621 301 KAEQITEEILSHFRKKSI 318 (323)
Q Consensus 301 ~~~~~~~~i~~fl~~~~~ 318 (323)
+|++|++.|.+||++..+
T Consensus 324 ~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 324 ETDRIDAILTTALRSTGE 341 (343)
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999987654
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=3.1e-32 Score=220.23 Aligned_cols=125 Identities=18% Similarity=0.183 Sum_probs=108.5
Q ss_pred ceeEEEECCeeEEEeecC---CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCC----CCCcHH
Q 020621 5 NHRRVHTNGIWMHIAEKG---QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDP----ESYTIF 77 (323)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g---~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~----~~~~~~ 77 (323)
+.+++..+|.+++|..++ ++++||++||++++...|..++..|.++||+|+++|+||||.|+..... ...+++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 456777799999999875 3578999999999998999999999889999999999999999764321 225889
Q ss_pred HHHHHHHHHHHHh----CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 78 HLVGDLIGLLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 78 ~~~~~i~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
++++|+.++++.+ +..+++++||||||.+++.++.++|++++++|+++|+..
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 9999999999886 567999999999999999999999999999999988653
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=7.2e-33 Score=217.90 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=160.0
Q ss_pred EEeecC----CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 17 HIAEKG----QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 17 ~~~~~g----~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
+|...| ++|+||++||++++...|..+++.|.+ ||+|+++|+||||.|..... ..++++++++++.+++++++.
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhCC
Confidence 555555 368999999999999999999988876 59999999999999986543 568999999999999999999
Q ss_pred ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHH
Q 020621 93 EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTV 172 (323)
Q Consensus 93 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (323)
++++++||||||++|+.++.++|++|+++|++++..................+.. . .....
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------~-------------~~~~~ 140 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQH------A-------------GPEAY 140 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhc------c-------------Ccchh
Confidence 9999999999999999999999999999999987543311100000000000000 0 00000
Q ss_pred HHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc-cCcchhhHHHHhhh-ccccccCccCCCccc
Q 020621 173 LKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA-TGFTGALNYYRAMD-KNWELTAPWQGAKIC 250 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 250 (323)
........... .+. ... ......... ..... .............. ...... ..+++
T Consensus 141 ~~~~~~~~~~~--------~~~---~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~ 198 (257)
T TIGR03611 141 VHAQALFLYPA--------DWI---SEN---AARLAADEA----HALAHFPGKANVLRRINALEAFDVSAR----LDRIQ 198 (257)
T ss_pred hhhhhhhhccc--------cHh---hcc---chhhhhhhh----hcccccCccHHHHHHHHHHHcCCcHHH----hcccC
Confidence 00000000000 000 000 000000000 00000 00000000000000 001111 12789
Q ss_pred cceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 251 VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 251 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
+|+++++|++|.++|++. .+.+.+..++++++.++++||++++++|+++++.|.+||++
T Consensus 199 ~P~l~i~g~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQ------SLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred ccEEEEecCcCcccCHHH------HHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999876 35667778899999999999999999999999999999963
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=9e-33 Score=215.12 Aligned_cols=100 Identities=19% Similarity=0.169 Sum_probs=90.6
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|..+. ..+++++++++.+++++++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 578999999999999999999988 3 5999999999999998654 3489999999999999999999999999999
Q ss_pred HHHHHHHHhhCccc-cceeeeecccC
Q 020621 104 AQIAWNLCLFRPDR-VKALVNLGVAY 128 (323)
Q Consensus 104 g~~a~~~a~~~p~~-v~~lvl~~~~~ 128 (323)
|.+|+.+|.++|+. |++++++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999999764 99999987654
No 22
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.3e-32 Score=218.13 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=158.8
Q ss_pred EEEECCeeEEEeecCC----CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 020621 8 RVHTNGIWMHIAEKGQ----GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDL 83 (323)
Q Consensus 8 ~~~~~g~~~~~~~~g~----~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i 83 (323)
++..||.+++|+.+.+ .+.|+++||+++++..|..+++.|.++||+|+++|+||||.|+.... ...++.++++|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-MIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-CcCCHHHHHHHH
Confidence 5666999999987542 35677779999999999999999999999999999999999975431 234667777888
Q ss_pred HHHHHHh----CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcc
Q 020621 84 IGLLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGV 159 (323)
Q Consensus 84 ~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (323)
.+.++.+ ...+++|+||||||.+|+.+|.++|++++++|+++|....... .....+....
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~--~~~~~~~~~~-------------- 147 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV--PRLNLLAAKL-------------- 147 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc--cHHHHHHHHH--------------
Confidence 7777654 3458999999999999999999999999999999986542110 0001000000
Q ss_pred hhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc---c-Ccch-hhHHHHhh
Q 020621 160 AEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA---T-GFTG-ALNYYRAM 234 (323)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~ 234 (323)
...+.. ....... .+................. . .... ........
T Consensus 148 --------------~~~~~~---~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (276)
T PHA02857 148 --------------MGIFYP---NKIVGKL-------------CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKA 197 (276)
T ss_pred --------------HHHhCC---CCccCCC-------------CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHH
Confidence 000000 0000000 0000000000000000000 0 0000 00000000
Q ss_pred hccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcC-CCceEEEecCCCcccchhch---HHHHHHHH
Q 020621 235 DKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV-PDLEVVVIRDAQHYIQLEKA---EQITEEIL 310 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~---~~~~~~i~ 310 (323)
......... ++++|+|+|+|++|.++|++.. +.+.+.. +++++++++++||.++.|++ +++.+.+.
T Consensus 198 ~~~~~~~l~----~i~~Pvliv~G~~D~i~~~~~~------~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~ 267 (276)
T PHA02857 198 TNKVRKIIP----KIKTPILILQGTNNEISDVSGA------YYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIE 267 (276)
T ss_pred HHHHHHhcc----cCCCCEEEEecCCCCcCChHHH------HHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHH
Confidence 000011111 7999999999999999998864 4455544 46899999999999998865 67999999
Q ss_pred HHhhhc
Q 020621 311 SHFRKK 316 (323)
Q Consensus 311 ~fl~~~ 316 (323)
+||+++
T Consensus 268 ~~l~~~ 273 (276)
T PHA02857 268 TWIFNR 273 (276)
T ss_pred HHHHHh
Confidence 999885
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.8e-32 Score=213.98 Aligned_cols=258 Identities=19% Similarity=0.157 Sum_probs=164.7
Q ss_pred ECCeeEEEeec-CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 020621 11 TNGIWMHIAEK-GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE 89 (323)
Q Consensus 11 ~~g~~~~~~~~-g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 89 (323)
-||.+++|.+. +++|+|||+||++.+...|.++...|.++||+|+++|+||||.|..... ..++++++++++.++++.
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHh
Confidence 47888998886 5778999999999999999999999988899999999999998854432 347999999999999999
Q ss_pred hC-CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhc-----ceeeeeccCCcchhhh
Q 020621 90 LG-EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGE-----GLYISQFQEPGVAEKS 163 (323)
Q Consensus 90 ~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 163 (323)
++ .++++|+||||||+++..++.++|++|+++|++++........ ........... ..+...+... .....
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 159 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ--TDEDMKDGVPDLSEFGDVYELGFGLG-PDQPP 159 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC--HHHHHhccccchhhhccceeeeeccC-CCCCC
Confidence 85 5799999999999999999999999999999998643221110 00000000000 0000000000 00000
Q ss_pred cccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCc
Q 020621 164 FSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAP 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
........+...++.. ....+............... .+... ......
T Consensus 160 ~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~- 206 (273)
T PLN02211 160 TSAIIKKEFRRKILYQ--------------------------MSPQEDSTLAAMLLRPGPIL----ALRSA--RFEEET- 206 (273)
T ss_pred ceeeeCHHHHHHHHhc--------------------------CCCHHHHHHHHHhcCCcCcc----ccccc--cccccc-
Confidence 0000000001111000 01111111111111111100 00000 000000
Q ss_pred cCCCcc-ccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 244 WQGAKI-CVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 244 ~~~~~~-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
..+ ++|+++|.|++|..+|++. .+.+.+..++++++.++ +||.+++++|+++++.|.++...
T Consensus 207 ---~~~~~vP~l~I~g~~D~~ip~~~------~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 207 ---GDIDKVPRVYIKTLHDHVVKPEQ------QEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ---cccCccceEEEEeCCCCCCCHHH------HHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 134 8999999999999999876 46778888888999996 79999999999999999988654
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-31 Score=217.83 Aligned_cols=264 Identities=16% Similarity=0.210 Sum_probs=161.6
Q ss_pred eeEEE-ECCeeEEEeecC------CCCeEEEEcccCCCc-hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHH
Q 020621 6 HRRVH-TNGIWMHIAEKG------QGPLVLLIHGFPELW-SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIF 77 (323)
Q Consensus 6 ~~~~~-~~g~~~~~~~~g------~~~~lv~~hG~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~ 77 (323)
..+++ .||.+++|..++ ..++|||+||++.+. ..|..+...|.++||+|+++|+||||.|+.... ...+++
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~ 112 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVD 112 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHH
Confidence 33444 499999998753 235699999998664 346677788998899999999999999975432 345888
Q ss_pred HHHHHHHHHHHHhCC------ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceee
Q 020621 78 HLVGDLIGLLDELGE------EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYI 151 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (323)
++++|+.++++.+.. .+++|+||||||++++.++.++|++|+++|+++|........... ......
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~------- 184 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP-WPIPQI------- 184 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc-hHHHHH-------
Confidence 999999999998743 379999999999999999999999999999999865332210000 000000
Q ss_pred eeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcc------
Q 020621 152 SQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFT------ 225 (323)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 225 (323)
...+..+...... .. ..... ...........+.. .....+.
T Consensus 185 ------------------~~~~~~~~~~~~~----~~-~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (330)
T PLN02298 185 ------------------LTFVARFLPTLAI----VP-TADLL---------EKSVKVPAKKIIAK-RNPMRYNGKPRLG 231 (330)
T ss_pred ------------------HHHHHHHCCCCcc----cc-CCCcc---------cccccCHHHHHHHH-hCccccCCCccHH
Confidence 0000010000000 00 00000 00000000000000 0000000
Q ss_pred hhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcC--CCceEEEecCCCcccchhchH
Q 020621 226 GALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV--PDLEVVVIRDAQHYIQLEKAE 303 (323)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~ 303 (323)
.....++..+. ...... ++++|+|+|+|++|.++|++.. +.+.+.. +++++++++++||.++.++|+
T Consensus 232 ~~~~~~~~~~~-~~~~l~----~i~~PvLii~G~~D~ivp~~~~------~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd 300 (330)
T PLN02298 232 TVVELLRVTDY-LGKKLK----DVSIPFIVLHGSADVVTDPDVS------RALYEEAKSEDKTIKIYDGMMHSLLFGEPD 300 (330)
T ss_pred HHHHHHHHHHH-HHHhhh----hcCCCEEEEecCCCCCCCHHHH------HHHHHHhccCCceEEEcCCcEeeeecCCCH
Confidence 00001111100 001111 7899999999999999998864 4444443 478999999999999988775
Q ss_pred ----HHHHHHHHHhhhccccccc
Q 020621 304 ----QITEEILSHFRKKSIICAT 322 (323)
Q Consensus 304 ----~~~~~i~~fl~~~~~~~~~ 322 (323)
++.+.|.+||++.....+|
T Consensus 301 ~~~~~~~~~i~~fl~~~~~~~~~ 323 (330)
T PLN02298 301 ENIEIVRRDILSWLNERCTGKAT 323 (330)
T ss_pred HHHHHHHHHHHHHHHHhccCCCC
Confidence 5777889999987654443
No 25
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=9.8e-33 Score=224.71 Aligned_cols=284 Identities=14% Similarity=0.097 Sum_probs=159.1
Q ss_pred EECCeeEEEeecCC----C-CeEEEEcccCCCchhHHHHH---HhhhhcCcEEEeeCCCCCCCCCCCCCC-CCCcHH---
Q 020621 10 HTNGIWMHIAEKGQ----G-PLVLLIHGFPELWSCWKYQI---NHLAEHGYHVVAPDMRGYGDSDSPQDP-ESYTIF--- 77 (323)
Q Consensus 10 ~~~g~~~~~~~~g~----~-~~lv~~hG~~~~~~~~~~~~---~~l~~~G~~vi~~d~~G~G~s~~~~~~-~~~~~~--- 77 (323)
+++|.+++|...|+ + |+||++||++++...|..++ +.|...+|+||++|+||||.|+.+... ..++++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 34788899998874 2 45777777777777776554 467655799999999999999765421 123333
Q ss_pred --HHHHHHHH----HHHHhCCccE-EEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhc-ce
Q 020621 78 --HLVGDLIG----LLDELGEEQA-FVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGE-GL 149 (323)
Q Consensus 78 --~~~~~i~~----~l~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~ 149 (323)
.+++++.+ ++++++++++ +|+||||||++|+.+|.++|++|+++|++++............+.....+.. ..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 24555554 6688999994 7999999999999999999999999999987543211100000011110100 00
Q ss_pred eeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCC-CCCCCC-HHHHHHHHHhh-cccCcch
Q 020621 150 YISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSS-LPEWVN-LEDLQSWAEKF-NATGFTG 226 (323)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~~~ 226 (323)
+...... ..... ......+.+...... ..+. ..... ...... .+....+.... .......
T Consensus 182 ~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (339)
T PRK07581 182 FNGGWYA-EPPER-----GLRAHARVYAGWGFS--------QAFY---RQELWRAMGYASLEDFLVGFWEGNFLPRDPNN 244 (339)
T ss_pred CCCCCCC-CcHHH-----HHHHHHHHHHHHHhH--------HHHH---HhhhccccChhhHHHHHHHHHHHhhcccCccc
Confidence 0000000 00000 000000000000000 0000 00000 000000 11111121111 1111111
Q ss_pred hhHHHHhhh-----ccc--cccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecC-CCcccc
Q 020621 227 ALNYYRAMD-----KNW--ELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRD-AQHYIQ 298 (323)
Q Consensus 227 ~~~~~~~~~-----~~~--~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~ 298 (323)
....++... ... .........++++|+|+|+|++|.++|++. .+.+++..|+++++++++ +||+++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~------~~~l~~~ip~a~l~~i~~~~GH~~~ 318 (339)
T PRK07581 245 LLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPED------CEAEAALIPNAELRPIESIWGHLAG 318 (339)
T ss_pred HHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHH------HHHHHHhCCCCeEEEeCCCCCcccc
Confidence 111111110 000 000011112799999999999999999875 466778889999999998 999999
Q ss_pred hhchHHHHHHHHHHhhhc
Q 020621 299 LEKAEQITEEILSHFRKK 316 (323)
Q Consensus 299 ~~~~~~~~~~i~~fl~~~ 316 (323)
+++|+++++.|.+||++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 319 FGQNPADIAFIDAALKEL 336 (339)
T ss_pred ccCcHHHHHHHHHHHHHH
Confidence 999999999999999875
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.6e-32 Score=215.03 Aligned_cols=246 Identities=26% Similarity=0.341 Sum_probs=162.2
Q ss_pred EEEeecCC---CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 16 MHIAEKGQ---GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 16 ~~~~~~g~---~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
++|...|+ .|+||++||++.+...|.++++.|.. ||+|+++|+||||.|+... ..++++++++++.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 56766663 47899999999999999999998875 6999999999999997654 567999999999999999998
Q ss_pred ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHH
Q 020621 93 EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTV 172 (323)
Q Consensus 93 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (323)
++++++|||+||++++.+|.++|++++++|+++++....... ......... ... .+.. .....
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-~~~~~~~~~----------~~~-----~~~~-~~~~~ 141 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-SWNARIAAV----------RAE-----GLAA-LADAV 141 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh-hHHHHHhhh----------hhc-----cHHH-HHHHH
Confidence 999999999999999999999999999999998754321110 000000000 000 0000 00011
Q ss_pred HHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhc-cccccCccCCCcccc
Q 020621 173 LKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDK-NWELTAPWQGAKICV 251 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 251 (323)
+..++.... . .........+...+................. ...... .++++
T Consensus 142 ~~~~~~~~~-----~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 194 (251)
T TIGR02427 142 LERWFTPGF-----R------------------EAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRL----GAIAV 194 (251)
T ss_pred HHHHccccc-----c------------------cCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHh----hhcCC
Confidence 111110000 0 0011111122211111111111111111110 000111 17899
Q ss_pred ceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 252 PTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 252 Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
|+++++|++|.++|.+. .+.+.+..++.++++++++||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPEL------VREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHH------HHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999875 3556677788999999999999999999999999999984
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=1.6e-32 Score=224.01 Aligned_cols=121 Identities=29% Similarity=0.351 Sum_probs=100.5
Q ss_pred EECCeeEEEeecCC-----CCeEEEEcccCCCch-----------hHHHHH---HhhhhcCcEEEeeCCCC--CCCCCCC
Q 020621 10 HTNGIWMHIAEKGQ-----GPLVLLIHGFPELWS-----------CWKYQI---NHLAEHGYHVVAPDMRG--YGDSDSP 68 (323)
Q Consensus 10 ~~~g~~~~~~~~g~-----~~~lv~~hG~~~~~~-----------~~~~~~---~~l~~~G~~vi~~d~~G--~G~s~~~ 68 (323)
.++|.+++|..+|. +++||++||++++.. .|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 44788999999883 579999999999763 477776 35655679999999999 5665432
Q ss_pred C----------CCCCCcHHHHHHHHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 69 Q----------DPESYTIFHLVGDLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 69 ~----------~~~~~~~~~~~~~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
. +...++++++++++.+++++++.++ ++++||||||++++.+|.++|++|+++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 1 0125889999999999999999998 999999999999999999999999999999986543
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=4e-32 Score=222.99 Aligned_cols=120 Identities=24% Similarity=0.316 Sum_probs=97.6
Q ss_pred EECCeeEEEeecCC-----CCeEEEEcccCCCchh-------------HHHHHH---hhhhcCcEEEeeCCCCC-CCCCC
Q 020621 10 HTNGIWMHIAEKGQ-----GPLVLLIHGFPELWSC-------------WKYQIN---HLAEHGYHVVAPDMRGY-GDSDS 67 (323)
Q Consensus 10 ~~~g~~~~~~~~g~-----~~~lv~~hG~~~~~~~-------------~~~~~~---~l~~~G~~vi~~d~~G~-G~s~~ 67 (323)
+++|.+++|...|. +|+|||+||++++... |..++. .|...+|+||++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 34677889999884 5899999999999874 666652 44344699999999983 54432
Q ss_pred CC------------CCCCCcHHHHHHHHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 68 PQ------------DPESYTIFHLVGDLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 68 ~~------------~~~~~~~~~~~~~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+. +...++++++++++.+++++++.++ ++++||||||++++.+|.++|++|+++|++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 21 0126899999999999999999999 48999999999999999999999999999997654
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=4e-32 Score=212.10 Aligned_cols=237 Identities=17% Similarity=0.190 Sum_probs=148.8
Q ss_pred CCC-CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEe
Q 020621 22 GQG-PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGH 100 (323)
Q Consensus 22 g~~-~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~ 100 (323)
|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|.... .++++++++++.+.+ .++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEE
Confidence 345 7999999999999999999999987 4999999999999987543 467788887776654 368999999
Q ss_pred chHHHHHHHHHhhCccccceeeeecccCCCCCCC-C--CchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHH
Q 020621 101 DWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPE-L--KPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLL 177 (323)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (323)
||||.+++.++.++|++++++|++++........ . .........+.. .+. ......+..++
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~~~~~~~~~ 136 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQ---------------QLS-DDYQRTIERFL 136 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHH---------------Hhh-hhHHHHHHHHH
Confidence 9999999999999999999999998765321110 0 000000000000 000 00001111111
Q ss_pred hhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccC---cchhhHHHHhhhc-cccccCccCCCccccce
Q 020621 178 LVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATG---FTGALNYYRAMDK-NWELTAPWQGAKICVPT 253 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Pv 253 (323)
........ ........+...+.... .......+..... ...... .++++|+
T Consensus 137 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~i~~Pv 191 (245)
T TIGR01738 137 ALQTLGTP---------------------TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPL----QNISVPF 191 (245)
T ss_pred HHHHhcCC---------------------ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHH----hcCCCCE
Confidence 10000000 00011111111111000 0011111111100 000111 1899999
Q ss_pred EEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHh
Q 020621 254 KFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHF 313 (323)
Q Consensus 254 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (323)
++++|++|.++|++. .+.+.+..+++++++++++||++++|+|+++++.|.+|+
T Consensus 192 lii~g~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 192 LRLYGYLDGLVPAKV------VPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EEEeecCCcccCHHH------HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999999999999875 355677889999999999999999999999999999996
No 30
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=2.7e-32 Score=216.42 Aligned_cols=255 Identities=24% Similarity=0.264 Sum_probs=160.7
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
++++||++||++++...|+.++..|.+. |+.|+++|++|+|.++..+....|+..+.++.+..+......++++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4789999999999999999999998876 599999999999966655554679999999999999999999999999999
Q ss_pred hHHHHHHHHHhhCccccceee---eecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHh
Q 020621 102 WGAQIAWNLCLFRPDRVKALV---NLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLL 178 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (323)
+||.+|+.+|+.+|+.|++++ +++++................. .........+....... .............
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDK---FLSALELLIPLSLTEPV-RLVSEGLLRCLKV 212 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhh---hccHhhhcCccccccch-hheeHhhhcceee
Confidence 999999999999999999999 5555554333221111111110 00000000000000000 0000000000000
Q ss_pred hcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc--------cCcchhhHHHHhhhccccccCccCCCccc
Q 020621 179 VNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA--------TGFTGALNYYRAMDKNWELTAPWQGAKIC 250 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (323)
.................+ ..+..........+.......+ ++.
T Consensus 213 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~ 263 (326)
T KOG1454|consen 213 -------------------------VYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK----KIW 263 (326)
T ss_pred -------------------------eccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc----ccc
Confidence 000000000000000000 0000000000000000011111 565
Q ss_pred -cceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 251 -VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 251 -~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
||+|+++|++|.++|.+. +..+.+..|++++++++++||.+++|.|+++++.|..|+...
T Consensus 264 ~~pvlii~G~~D~~~p~~~------~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLEL------AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CCceEEEEcCcCCccCHHH------HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999999999999885 567777789999999999999999999999999999999864
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=8.3e-32 Score=210.95 Aligned_cols=250 Identities=25% Similarity=0.321 Sum_probs=156.9
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHhCCccEEEEEech
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD-LIGLLDELGEEQAFVVGHDW 102 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~-i~~~l~~~~~~~~~lvG~S~ 102 (323)
+|+||++||++++...|.++++.|+ +||+|+++|+||+|.|..+......++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 689999999999999987654457789999999 78888888888999999999
Q ss_pred HHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCC
Q 020621 103 GAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAP 182 (323)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (323)
||.+++.+|.++|++|++++++++......... ......... .....+...........+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEE----RAARRQNDE----------QLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHh----hhhhhhcch----------hhhhHHHhcCccHHHHHHhcCcee
Confidence 999999999999999999999987643221100 000000000 000000000011111111110000
Q ss_pred CCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCC
Q 020621 183 DIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHM 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~ 262 (323)
.. ...........+...............+................++++|+++++|++|.
T Consensus 146 ---------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 206 (251)
T TIGR03695 146 ---------------AS----QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDE 206 (251)
T ss_pred ---------------ee----cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcch
Confidence 00 00011111111111111111111111111111000000000011789999999999998
Q ss_pred CCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 263 GFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
.++ +. .+.+.+..+++++++++++||++++++|+++++.|.+|++
T Consensus 207 ~~~-~~------~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 207 KFV-QI------AKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHH-HH------HHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 764 22 3567778889999999999999999999999999999984
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3.6e-31 Score=201.48 Aligned_cols=256 Identities=21% Similarity=0.308 Sum_probs=160.9
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC--CCCCcHHHHHHHHHHHHHHhCCccEEEEEe
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD--PESYTIFHLVGDLIGLLDELGEEQAFVVGH 100 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~ 100 (323)
..+++|++||+|.+...|..-++.|++. ++|+++|++|+|.|+.+.- ........+++-+.++....++.+.+|+||
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGH 167 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGH 167 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeec
Confidence 4679999999999999999999999995 9999999999999988752 123345578999999999999999999999
Q ss_pred chHHHHHHHHHhhCccccceeeeecccCCCCCCCC------CchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHH
Q 020621 101 DWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPEL------KPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLK 174 (323)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (323)
|+||++|..||.++|++|+.|||++|...+..+.. .+...++......... .|-..-+.+..+ ...++.
T Consensus 168 SfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~----nPl~~LR~~Gp~-Gp~Lv~ 242 (365)
T KOG4409|consen 168 SFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNF----NPLALLRLMGPL-GPKLVS 242 (365)
T ss_pred cchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcC----CHHHHHHhcccc-chHHHh
Confidence 99999999999999999999999999987764411 1111111111110000 000000111110 011111
Q ss_pred HHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhh----------hccccccCcc
Q 020621 175 KLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAM----------DKNWELTAPW 244 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 244 (323)
++...... ..+....++.+..|.-........+-..+-..+ ..+....
T Consensus 243 ~~~~d~~~-------------------k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l--- 300 (365)
T KOG4409|consen 243 RLRPDRFR-------------------KFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL--- 300 (365)
T ss_pred hhhHHHHH-------------------hccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh---
Confidence 11111000 011112233333333333222221111110000 0000000
Q ss_pred CCCccccceEEEecCCCCCCCCcCccccccchhhhh--cCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 245 QGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKT--LVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 245 ~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
+-+||+++|+|++|-+-.... ..+.+ ....++.++++++||.+++++|+.|++.+.+++++.
T Consensus 301 ---~~~~pv~fiyG~~dWmD~~~g-------~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 301 ---KKDVPVTFIYGDRDWMDKNAG-------LEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred ---ccCCCEEEEecCcccccchhH-------HHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 446999999999998765443 22333 233489999999999999999999999999998763
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1.6e-32 Score=211.84 Aligned_cols=224 Identities=28% Similarity=0.424 Sum_probs=149.1
Q ss_pred EEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHH
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQI 106 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~ 106 (323)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|........++++++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 689999999999999987664346899999999999999999999999999999999
Q ss_pred HHHHHhhCccccceeeeecccCCCCCCC--CCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCC
Q 020621 107 AWNLCLFRPDRVKALVNLGVAYMPRSPE--LKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDI 184 (323)
Q Consensus 107 a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++.++.++|++|+++|+++++....... ......+...... ... .........+..
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~~~----- 137 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAW------------RSR-----SLRRLASRFFYR----- 137 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHH------------HHH-----HHHHHHHHHHHH-----
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhc------------ccc-----cccccccccccc-----
Confidence 9999999999999999999876431110 0000000000000 000 000000000000
Q ss_pred cCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHh--hhccccccCccCCCccccceEEEecCCCC
Q 020621 185 IAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRA--MDKNWELTAPWQGAKICVPTKFIIGDKHM 262 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~ 262 (323)
. ...+....+... ........++. .......... ++++|+++++|++|.
T Consensus 138 -----------~----------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~pvl~i~g~~D~ 188 (228)
T PF12697_consen 138 -----------W----------FDGDEPEDLIRS----SRRALAEYLRSNLWQADLSEALP----RIKVPVLVIHGEDDP 188 (228)
T ss_dssp -----------H----------HTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH----GSSSEEEEEEETTSS
T ss_pred -----------c----------cccccccccccc----ccccccccccccccccccccccc----ccCCCeEEeecCCCC
Confidence 0 001111111111 00000111110 1111111111 789999999999999
Q ss_pred CCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHH
Q 020621 263 GFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEE 308 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 308 (323)
+++.+. .+.+.+..+++++++++++||++++++|++|+++
T Consensus 189 ~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 189 IVPPES------AEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSHHHH------HHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred CCCHHH------HHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 998554 4667777899999999999999999999999874
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=2.1e-31 Score=213.12 Aligned_cols=122 Identities=26% Similarity=0.416 Sum_probs=102.3
Q ss_pred eEEEECCeeEEEeecC---CCCeEEEEcccCCCchh-HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCC-CCcHHHHHH
Q 020621 7 RRVHTNGIWMHIAEKG---QGPLVLLIHGFPELWSC-WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE-SYTIFHLVG 81 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g---~~~~lv~~hG~~~~~~~-~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~~ 81 (323)
.+++.+|.++.|...+ ++++|||+||++++... |..+...|.+.||+|+++|+||+|.|..+.... .++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 4677888888888766 36899999998766554 455555666558999999999999998654212 478999999
Q ss_pred HHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 82 DLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 82 ~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
++.+++++++.++++++||||||.+++.++.++|++++++|++++..
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 99999999999999999999999999999999999999999998754
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.98 E-value=1e-30 Score=216.27 Aligned_cols=254 Identities=23% Similarity=0.298 Sum_probs=164.8
Q ss_pred eEEEECCeeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 020621 7 RRVHTNGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLI 84 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~ 84 (323)
..+..++.+++|...|+ +++|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...+++++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 45677888999988874 689999999999999999999999875 999999999999997554 4678999999999
Q ss_pred HHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhc
Q 020621 85 GLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSF 164 (323)
Q Consensus 85 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (323)
++++.++.++++++|||+||.+++.+|..+|+++.++|+++++....... ..+...+.. . .
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~----~~~~~~~~~---------~------~ 249 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN----GDYIDGFVA---------A------E 249 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc----hhHHHHhhc---------c------c
Confidence 99999999999999999999999999999999999999998764321110 000000000 0 0
Q ss_pred ccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHh--hhcc-cccc
Q 020621 165 SKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRA--MDKN-WELT 241 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 241 (323)
........+...+. ... .........................+.. .... ....
T Consensus 250 ~~~~~~~~~~~~~~----~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (371)
T PRK14875 250 SRRELKPVLELLFA----DPA--------------------LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVD 305 (371)
T ss_pred chhHHHHHHHHHhc----Chh--------------------hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchh
Confidence 00000011111100 000 0000100000000000000000000000 0000 0000
Q ss_pred CccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 242 APWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 242 ~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
......+++||+++++|++|.++|++.. ....+++++.+++++||++++++|+++++.|.+||++
T Consensus 306 ~~~~l~~i~~Pvlii~g~~D~~vp~~~~---------~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 306 LRDRLASLAIPVLVIWGEQDRIIPAAHA---------QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHHHHhcCCCCEEEEEECCCCccCHHHH---------hhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 0000117899999999999999986542 2233468999999999999999999999999999975
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.4e-29 Score=207.25 Aligned_cols=106 Identities=21% Similarity=0.382 Sum_probs=89.8
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCc----HHHHHHHHHHHHHHhCCccEEEE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYT----IFHLVGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~----~~~~~~~i~~~l~~~~~~~~~lv 98 (323)
++|+|||+||++++...|...+..|.+. |+|+++|+||||.|+.+.. ...+ .+.+++++.++++.++.++++|+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDF-TCKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 5689999999999999999888989875 9999999999999976541 1111 12356778888888898999999
Q ss_pred EechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 99 GHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
||||||.+|+.+|.++|++|+++|+++|....
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 99999999999999999999999999987644
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=1.5e-29 Score=199.03 Aligned_cols=267 Identities=21% Similarity=0.206 Sum_probs=171.1
Q ss_pred ceeEEEECCeeEEEeecCC---C-CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 020621 5 NHRRVHTNGIWMHIAEKGQ---G-PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLV 80 (323)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~---~-~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (323)
+..+...+|..++|..+.. . .+||++||++.+...|..++..|..+||.|+++|+||||.|.........+++++.
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 4566677999999998862 2 58999999999999999999999999999999999999999732222455699999
Q ss_pred HHHHHHHHHhC----CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccC
Q 020621 81 GDLIGLLDELG----EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQE 156 (323)
Q Consensus 81 ~~i~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (323)
+|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|...... .............
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~~~~--------- 159 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARLALK--------- 159 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHHhcc---------
Confidence 99999999875 35899999999999999999999999999999999876543 0000000000000
Q ss_pred CcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCC--CCHHHHHHHHHhhc-ccCcchh---hHH
Q 020621 157 PGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEW--VNLEDLQSWAEKFN-ATGFTGA---LNY 230 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~---~~~ 230 (323)
.+..+....... . . . .......+ .+++..+.|...-. ....... ...
T Consensus 160 ---------------~~~~~~p~~~~~----~-~-~------~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~ 212 (298)
T COG2267 160 ---------------LLGRIRPKLPVD----S-N-L------LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLA 212 (298)
T ss_pred ---------------cccccccccccC----c-c-c------ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHH
Confidence 000000000000 0 0 0 00000111 12222233322211 1111111 111
Q ss_pred HHhhhccccccCccCCCccccceEEEecCCCCCCC-CcCccccccchhhhhcCCCceEEEecCCCcccchh-ch--HHHH
Q 020621 231 YRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFK-SFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLE-KA--EQIT 306 (323)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~--~~~~ 306 (323)
............. .+++|+|+++|++|.+++ .+...+++ -....+++++++++|+.|.++.| +. +++.
T Consensus 213 ~~a~~~~~~~~~~----~~~~PvLll~g~~D~vv~~~~~~~~~~----~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~ 284 (298)
T COG2267 213 LLAGRVPALRDAP----AIALPVLLLQGGDDRVVDNVEGLARFF----ERAGSPDKELKVIPGAYHELLNEPDRAREEVL 284 (298)
T ss_pred HHhhcccchhccc----cccCCEEEEecCCCccccCcHHHHHHH----HhcCCCCceEEecCCcchhhhcCcchHHHHHH
Confidence 1111100111111 789999999999999999 45543221 12335678999999999999877 44 8999
Q ss_pred HHHHHHhhhcc
Q 020621 307 EEILSHFRKKS 317 (323)
Q Consensus 307 ~~i~~fl~~~~ 317 (323)
+.+.+|+.+..
T Consensus 285 ~~~~~~l~~~~ 295 (298)
T COG2267 285 KDILAWLAEAL 295 (298)
T ss_pred HHHHHHHHhhc
Confidence 99999998764
No 38
>PLN02511 hydrolase
Probab=99.97 E-value=9.2e-30 Score=208.96 Aligned_cols=267 Identities=16% Similarity=0.190 Sum_probs=162.0
Q ss_pred cceeEEEE-CCeeEEEeec--------CCCCeEEEEcccCCCchh-H-HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCC
Q 020621 4 INHRRVHT-NGIWMHIAEK--------GQGPLVLLIHGFPELWSC-W-KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE 72 (323)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~--------g~~~~lv~~hG~~~~~~~-~-~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~ 72 (323)
.+++.+.+ ||..+.+.-. ..+|+||++||+++++.. | ..++..+.++||+|+++|+||||.|.... .
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~ 148 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--P 148 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--c
Confidence 34555665 7877765221 246799999999876543 4 56777777789999999999999997543 2
Q ss_pred CCcHHHHHHHHHHHHHHhCC----ccEEEEEechHHHHHHHHHhhCccc--cceeeeecccCCCCCCCCCchHHHHHhhh
Q 020621 73 SYTIFHLVGDLIGLLDELGE----EQAFVVGHDWGAQIAWNLCLFRPDR--VKALVNLGVAYMPRSPELKPTEIFFKLYG 146 (323)
Q Consensus 73 ~~~~~~~~~~i~~~l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 146 (323)
.......++|+.+++++++. .+++++||||||++++.++.++|++ |.++++++++...... ...+...+
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~----~~~~~~~~- 223 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA----DEDFHKGF- 223 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH----HHHHhccH-
Confidence 33335667888888887754 5899999999999999999999987 8888888765432000 00000000
Q ss_pred cceeeeeccCCcchhhhcccccHHHHHHHHHhh----cCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc-
Q 020621 147 EGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLV----NAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA- 221 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (323)
...+... ....++..+.. .......... ... .....+..+.+.+..
T Consensus 224 --------------~~~y~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~~~~~fd~~~t~~ 274 (388)
T PLN02511 224 --------------NNVYDKA-LAKALRKIFAKHALLFEGLGGEYNI-PLV-------------ANAKTVRDFDDGLTRV 274 (388)
T ss_pred --------------HHHHHHH-HHHHHHHHHHHHHHHHhhCCCccCH-HHH-------------HhCCCHHHHHHhhhhh
Confidence 0000000 00001111100 0000000000 000 000111122222222
Q ss_pred -cCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchh
Q 020621 222 -TGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLE 300 (323)
Q Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 300 (323)
.++.....+|...+..... . +|++|+|+|+|++|+++|++.. .....+..|++++++++++||++++|
T Consensus 275 ~~gf~~~~~yy~~~s~~~~L--~----~I~vPtLiI~g~dDpi~p~~~~-----~~~~~~~~p~~~l~~~~~gGH~~~~E 343 (388)
T PLN02511 275 SFGFKSVDAYYSNSSSSDSI--K----HVRVPLLCIQAANDPIAPARGI-----PREDIKANPNCLLIVTPSGGHLGWVA 343 (388)
T ss_pred cCCCCCHHHHHHHcCchhhh--c----cCCCCeEEEEcCCCCcCCcccC-----cHhHHhcCCCEEEEECCCcceecccc
Confidence 2344444444433322221 2 8999999999999999997653 13355678999999999999999999
Q ss_pred chHH------HHHHHHHHhhhcc
Q 020621 301 KAEQ------ITEEILSHFRKKS 317 (323)
Q Consensus 301 ~~~~------~~~~i~~fl~~~~ 317 (323)
+|+. +.+.+.+||+...
T Consensus 344 ~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 344 GPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred CCCCCCCCccHHHHHHHHHHHHH
Confidence 9875 5899999998764
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=3.4e-29 Score=235.65 Aligned_cols=112 Identities=22% Similarity=0.363 Sum_probs=98.8
Q ss_pred EEEeecCC---CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC------CCCCcHHHHHHHHHHH
Q 020621 16 MHIAEKGQ---GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD------PESYTIFHLVGDLIGL 86 (323)
Q Consensus 16 ~~~~~~g~---~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~~i~~~ 86 (323)
++|...|+ +++|||+||++++...|.+++..|.+. |+|+++|+||||.|..... ...++++++++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 55666663 689999999999999999999999875 9999999999999975431 1357899999999999
Q ss_pred HHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 87 LDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 87 l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
+++++.++++|+||||||.+++.++.++|++|+++|++++..
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 999999999999999999999999999999999999998653
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=5.6e-29 Score=199.54 Aligned_cols=124 Identities=25% Similarity=0.351 Sum_probs=103.7
Q ss_pred ceeEEEE-CCeeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 020621 5 NHRRVHT-NGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVG 81 (323)
Q Consensus 5 ~~~~~~~-~g~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (323)
..++++. +|.+++|...|+ +++|||+||++++...+ .+...+...+|+|+++|+||||.|........++..++++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 4556666 689999999885 78999999988776543 3444454557999999999999998654334568889999
Q ss_pred HHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 82 DLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 82 ~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
++..++++++.++++++||||||.+++.++.++|++|+++|++++...
T Consensus 84 dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 84 DIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999999999999999999999999999999999999999987654
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.3e-28 Score=201.13 Aligned_cols=252 Identities=15% Similarity=0.180 Sum_probs=155.7
Q ss_pred CCeeEEEeecCC-----CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 020621 12 NGIWMHIAEKGQ-----GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGL 86 (323)
Q Consensus 12 ~g~~~~~~~~g~-----~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~ 86 (323)
+|..++|..+.+ .++||++||++++...|..++..|.++||+|+++|+||||.|+.... ...+++.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 667787776642 35899999999999999999999999999999999999999986542 345788889999999
Q ss_pred HHHhCC----ccEEEEEechHHHHHHHHHhhCc---cccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcc
Q 020621 87 LDELGE----EQAFVVGHDWGAQIAWNLCLFRP---DRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGV 159 (323)
Q Consensus 87 l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (323)
++.+.. .+++++||||||.+++.++. +| ++++++|+.+|....... ......+...
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~-~~~~~~~~~l--------------- 260 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA-HPIVGAVAPI--------------- 260 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc-hHHHHHHHHH---------------
Confidence 988753 37999999999999998775 55 489999999876532111 0000000000
Q ss_pred hhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHH-HHHHHhhcccCcchh---hHHHHhhh
Q 020621 160 AEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDL-QSWAEKFNATGFTGA---LNYYRAMD 235 (323)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~ 235 (323)
+..+.... ........ ......+.+.. ..+...+...+.... ...++...
T Consensus 261 -------------~~~~~p~~----~~~~~~~~---------~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~ 314 (395)
T PLN02652 261 -------------FSLVAPRF----QFKGANKR---------GIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISS 314 (395)
T ss_pred -------------HHHhCCCC----cccCcccc---------cCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH
Confidence 00000000 00000000 00000000000 000000000000000 00001000
Q ss_pred ccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcC--CCceEEEecCCCcccchh-chHHHHHHHHHH
Q 020621 236 KNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV--PDLEVVVIRDAQHYIQLE-KAEQITEEILSH 312 (323)
Q Consensus 236 ~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~f 312 (323)
....... ++++|+|+++|++|.++|++.. +.+.+.. ++.+++++++++|.++.+ +++++.+.|.+|
T Consensus 315 -~l~~~L~----~I~vPvLIi~G~~D~vvp~~~a------~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~F 383 (395)
T PLN02652 315 -YLTRNFK----SVTVPFMVLHGTADRVTDPLAS------QDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDW 383 (395)
T ss_pred -HHHhhcc----cCCCCEEEEEeCCCCCCCHHHH------HHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHH
Confidence 0011111 7899999999999999998764 3343332 357899999999998777 799999999999
Q ss_pred hhhccc
Q 020621 313 FRKKSI 318 (323)
Q Consensus 313 l~~~~~ 318 (323)
|+.+..
T Consensus 384 L~~~~~ 389 (395)
T PLN02652 384 MEKRLD 389 (395)
T ss_pred HHHHhh
Confidence 997643
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=8e-29 Score=217.06 Aligned_cols=121 Identities=27% Similarity=0.594 Sum_probs=101.8
Q ss_pred cceeEEEECCeeEEEeecCC--CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 020621 4 INHRRVHTNGIWMHIAEKGQ--GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVG 81 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~--~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (323)
.+..+++.+|.+++|...|+ +|+|||+||++++...|.++++.|. .||+|+++|+||||.|+.......++++++++
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 3 PRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred ceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 45667778999999999883 7899999999999999999999995 46999999999999998765435789999999
Q ss_pred HHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhC--ccccceeeeec
Q 020621 82 DLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFR--PDRVKALVNLG 125 (323)
Q Consensus 82 ~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~ 125 (323)
|+.+++++++..+ ++|+||||||.+++.++.+. +.++..++.++
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999998765 99999999999999888762 34555555444
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.6e-28 Score=182.47 Aligned_cols=260 Identities=18% Similarity=0.238 Sum_probs=164.1
Q ss_pred eEEEECCeeEEEeecCC------CCeEEEEcccCCCc-hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 020621 7 RRVHTNGIWMHIAEKGQ------GPLVLLIHGFPELW-SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHL 79 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~------~~~lv~~hG~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 79 (323)
.+.+.+|..+++..+-+ .-.|+++||++... ..|..++..|+..||.|+++|++|||.|++... .--+++..
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~ 109 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLV 109 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHH
Confidence 34444898998877642 23799999999875 778889999999999999999999999997653 55688999
Q ss_pred HHHHHHHHHHhC------CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCC--chHHHHHhhhcceee
Q 020621 80 VGDLIGLLDELG------EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELK--PTEIFFKLYGEGLYI 151 (323)
Q Consensus 80 ~~~i~~~l~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 151 (323)
++|+..+.+... ..+..|+||||||.+++.++.++|+..+++|+++|.......... ....+...+.. ..
T Consensus 110 v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~--li 187 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSK--LI 187 (313)
T ss_pred HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHH--hC
Confidence 999999988642 237899999999999999999999999999999988754332211 11111111100 00
Q ss_pred eecc-CCc--chhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhh
Q 020621 152 SQFQ-EPG--VAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGAL 228 (323)
Q Consensus 152 ~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (323)
..+. .+. .....+.....+...+. ++.. .... .......
T Consensus 188 P~wk~vp~~d~~~~~~kdp~~r~~~~~-------npl~----------------y~g~---------------pRl~T~~ 229 (313)
T KOG1455|consen 188 PTWKIVPTKDIIDVAFKDPEKRKILRS-------DPLC----------------YTGK---------------PRLKTAY 229 (313)
T ss_pred CceeecCCccccccccCCHHHHHHhhc-------CCce----------------ecCC---------------ccHHHHH
Confidence 0000 000 01111111000000000 0000 0000 0011111
Q ss_pred HHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch----hchHH
Q 020621 229 NYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL----EKAEQ 304 (323)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~ 304 (323)
..++... ....... ++++|.+++||+.|.++.+...+++++ .....+.+++.+||.=|.... |+.+.
T Consensus 230 ElLr~~~-~le~~l~----~vtvPflilHG~dD~VTDp~~Sk~Lye----~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~ 300 (313)
T KOG1455|consen 230 ELLRVTA-DLEKNLN----EVTVPFLILHGTDDKVTDPKVSKELYE----KASSSDKTLKLYPGMWHSLLSGEPDENVEI 300 (313)
T ss_pred HHHHHHH-HHHHhcc----cccccEEEEecCCCcccCcHHHHHHHH----hccCCCCceeccccHHHHhhcCCCchhHHH
Confidence 1111111 1111111 899999999999999999998544331 222356899999999998764 46788
Q ss_pred HHHHHHHHhhhc
Q 020621 305 ITEEILSHFRKK 316 (323)
Q Consensus 305 ~~~~i~~fl~~~ 316 (323)
|...|.+||+++
T Consensus 301 Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 301 VFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHHHhc
Confidence 889999999864
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=3.6e-28 Score=172.71 Aligned_cols=222 Identities=22% Similarity=0.229 Sum_probs=153.2
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---CCccEEEEEec
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL---GEEQAFVVGHD 101 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~---~~~~~~lvG~S 101 (323)
..|+|+||+.|+....+.+.+.|.++||.|.++.+||||...... -..+++++.+++.+..+++ +.+.|.++|.|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 799999999999999999999999999999999999999886433 5678888888888777665 56799999999
Q ss_pred hHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcC
Q 020621 102 WGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNA 181 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (323)
|||.+++.+|..+| ++++|.++++....... ...+.+... .+++-
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-~iie~~l~y----------------------------~~~~k---- 138 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-IIIEGLLEY----------------------------FRNAK---- 138 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccch-hhhHHHHHH----------------------------HHHhh----
Confidence 99999999999998 99999999887643321 111111110 00000
Q ss_pred CCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCC
Q 020621 182 PDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKH 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D 261 (323)
.....+.+.+......+..........+ ..+......... .|..|++++.|++|
T Consensus 139 ---------------------k~e~k~~e~~~~e~~~~~~~~~~~~~~~-~~~i~~~~~~~~----~I~~pt~vvq~~~D 192 (243)
T COG1647 139 ---------------------KYEGKDQEQIDKEMKSYKDTPMTTTAQL-KKLIKDARRSLD----KIYSPTLVVQGRQD 192 (243)
T ss_pred ---------------------hccCCCHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHhhhh----hcccchhheecccC
Confidence 0001233333333333332111111111 111111111111 79999999999999
Q ss_pred CCCCCcCccccccchhhhhc--CCCceEEEecCCCcccch-hchHHHHHHHHHHhhh
Q 020621 262 MGFKSFGTENYIKGDEFKTL--VPDLEVVVIRDAQHYIQL-EKAEQITEEILSHFRK 315 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 315 (323)
.++|.+... .+... ..+.++.+++++||.+.. ++.+.+.+.+..||++
T Consensus 193 ~mv~~~sA~------~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 193 EMVPAESAN------FIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCHHHHH------HHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999987642 22222 234799999999999866 4789999999999974
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=5.8e-29 Score=173.63 Aligned_cols=251 Identities=20% Similarity=0.230 Sum_probs=170.6
Q ss_pred ccceeEEEECCeeEEEeecCCCC-eEEEEcccCCC-chhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCC-CCCCcHHH
Q 020621 3 DINHRRVHTNGIWMHIAEKGQGP-LVLLIHGFPEL-WSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQD-PESYTIFH 78 (323)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g~~~-~lv~~hG~~~~-~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~-~~~~~~~~ 78 (323)
..++..+.++|.++.|...|+|| .|++++|..++ ...|.+.+..|.+. .+.|+++|-||+|.|.++.. .+..-+..
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 35677888999999999999886 78888998776 45688777665443 48999999999999988762 22233445
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCc
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPG 158 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (323)
.+++...+++.+..+++.++|||-||..|+..|+++++.|..+|..+..........+..+.++.... +..+.+.|
T Consensus 100 Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~k---Ws~r~R~P- 175 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNK---WSARGRQP- 175 (277)
T ss_pred hHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhh---hhhhhcch-
Confidence 66677778888999999999999999999999999999999999998765443332222222221100 00000000
Q ss_pred chhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhh-hcc
Q 020621 159 VAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAM-DKN 237 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 237 (323)
.+. ....+........+ .+....+..+ +.+
T Consensus 176 -~e~-------------------------------------------~Yg~e~f~~~wa~w-----vD~v~qf~~~~dG~ 206 (277)
T KOG2984|consen 176 -YED-------------------------------------------HYGPETFRTQWAAW-----VDVVDQFHSFCDGR 206 (277)
T ss_pred -HHH-------------------------------------------hcCHHHHHHHHHHH-----HHHHHHHhhcCCCc
Confidence 000 01111111110000 0001111111 111
Q ss_pred cc-ccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 238 WE-LTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 238 ~~-~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
+. ...+ +++||+||++|+.|++++... .-.+....+.+++.++|.++|.+++..+++|++.+.+||++.
T Consensus 207 fCr~~lp----~vkcPtli~hG~kDp~~~~~h------v~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 207 FCRLVLP----QVKCPTLIMHGGKDPFCGDPH------VCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hHhhhcc----cccCCeeEeeCCcCCCCCCCC------ccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 11 1223 899999999999999998765 355677788899999999999999999999999999999864
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.96 E-value=8.8e-28 Score=182.78 Aligned_cols=256 Identities=20% Similarity=0.274 Sum_probs=166.8
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC----CccEEE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG----EEQAFV 97 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~----~~~~~l 97 (323)
+.|+++++||+.++...|..+...|+.. |..|+++|.|.||.|+... ..+..++++|+..+++..+ ..+++|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 6799999999999999999999999766 7899999999999998765 6679999999999999884 568999
Q ss_pred EEechHH-HHHHHHHhhCccccceeeeecccCCC-CCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHH
Q 020621 98 VGHDWGA-QIAWNLCLFRPDRVKALVNLGVAYMP-RSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKK 175 (323)
Q Consensus 98 vG~S~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (323)
+|||||| .+++..+...|+.+..+|.++-++.. ........+.+........-.............+........+..
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 88888889999999999999865532 222222333333222111110000000011111111111222222
Q ss_pred HHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEE
Q 020621 176 LLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKF 255 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~ 255 (323)
++..+... ... ........+...+......+. ...+...... ...+.||++
T Consensus 208 fi~~nl~~---~~~----------~~s~~w~~nl~~i~~~~~~~~--------------~~s~~~~l~~--~~~~~pvlf 258 (315)
T KOG2382|consen 208 FILTNLKK---SPS----------DGSFLWRVNLDSIASLLDEYE--------------ILSYWADLED--GPYTGPVLF 258 (315)
T ss_pred HHHHhcCc---CCC----------CCceEEEeCHHHHHHHHHHHH--------------hhcccccccc--cccccceeE
Confidence 22211110 000 000001122222222222211 0111111100 167889999
Q ss_pred EecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 256 IIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 256 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
+.|.++.+++.+. -..+.+.+|+++++.++++||+.++|+|++|.+.|.+|++..
T Consensus 259 i~g~~S~fv~~~~------~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 259 IKGLQSKFVPDEH------YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred EecCCCCCcChhH------HHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999876 367888899999999999999999999999999999999875
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.9e-27 Score=193.44 Aligned_cols=287 Identities=13% Similarity=0.111 Sum_probs=164.9
Q ss_pred CCeeEEEeecCC-----CCeEEEEcccCCCch-------------hHHHHH---HhhhhcCcEEEeeCCCCCCCCCCC--
Q 020621 12 NGIWMHIAEKGQ-----GPLVLLIHGFPELWS-------------CWKYQI---NHLAEHGYHVVAPDMRGYGDSDSP-- 68 (323)
Q Consensus 12 ~g~~~~~~~~g~-----~~~lv~~hG~~~~~~-------------~~~~~~---~~l~~~G~~vi~~d~~G~G~s~~~-- 68 (323)
...++.|..+|. .++||++|++++++. .|..++ ..|.-..|.||++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 356788999983 479999999998642 266665 345444599999999987653211
Q ss_pred ---------C--------CCCCCcHHHHHHHHHHHHHHhCCccEE-EEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 69 ---------Q--------DPESYTIFHLVGDLIGLLDELGEEQAF-VVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 69 ---------~--------~~~~~~~~~~~~~i~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+ ++..+++.++++++.++++++++++++ ++||||||++++.+|.++|++|+++|++++....
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 1 234589999999999999999999986 9999999999999999999999999999876543
Q ss_pred CCCC-CCchHHHHHhhh-c-ceeeeeccCCcchhhhcccc----cHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCC
Q 020621 131 RSPE-LKPTEIFFKLYG-E-GLYISQFQEPGVAEKSFSKY----DSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSL 203 (323)
Q Consensus 131 ~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (323)
.... ....+..+..+. . .|....+.........+... ........++........ . .. ....
T Consensus 199 ~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~--~--------~~-~~~~ 267 (389)
T PRK06765 199 DAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNA--S--------IE-VDPY 267 (389)
T ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCc--c--------cc-cccc
Confidence 2221 122222222111 1 11111110000000000000 000000001110000000 0 00 0000
Q ss_pred CCCCCHHHHHHHHHhh--------cccCcchhhHHHHhhhccccc-cCccCCCccccceEEEecCCCCCCCCcCcccccc
Q 020621 204 PEWVNLEDLQSWAEKF--------NATGFTGALNYYRAMDKNWEL-TAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIK 274 (323)
Q Consensus 204 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~ 274 (323)
.........+.|.... ....+......+...+..... .....+.++++|+|+|+|++|.++|++..
T Consensus 268 ~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~----- 342 (389)
T PRK06765 268 EKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYN----- 342 (389)
T ss_pred ccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH-----
Confidence 0011112233333221 111222222222222211000 00111227899999999999999998763
Q ss_pred chhhhhcCC----CceEEEecC-CCcccchhchHHHHHHHHHHhhh
Q 020621 275 GDEFKTLVP----DLEVVVIRD-AQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 275 ~~~~~~~~~----~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
+.+.+..+ +++++++++ +||++++++|+++++.|.+||++
T Consensus 343 -~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 343 -YKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred -HHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 44555554 689999985 89999999999999999999976
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=3.3e-26 Score=184.45 Aligned_cols=120 Identities=22% Similarity=0.352 Sum_probs=95.1
Q ss_pred EECCeeEEEeecC---CCCeEEEEcccCCCch-hH-------------------------HHHHHhhhhcCcEEEeeCCC
Q 020621 10 HTNGIWMHIAEKG---QGPLVLLIHGFPELWS-CW-------------------------KYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 10 ~~~g~~~~~~~~g---~~~~lv~~hG~~~~~~-~~-------------------------~~~~~~l~~~G~~vi~~d~~ 60 (323)
+.+|.+|++..+. +..+|+++||++.+.. .+ ..+++.|.++||.|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 3488999888764 3458999999998875 11 45789999999999999999
Q ss_pred CCCCCCCCCC--CCCCcHHHHHHHHHHHHHHhC------------------------CccEEEEEechHHHHHHHHHhhC
Q 020621 61 GYGDSDSPQD--PESYTIFHLVGDLIGLLDELG------------------------EEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 61 G~G~s~~~~~--~~~~~~~~~~~~i~~~l~~~~------------------------~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
|||.|..... ....+++++++|+.++++.+. ..|++|+||||||.+++.++.++
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 9999976431 112488999999999998642 24799999999999999998765
Q ss_pred cc--------ccceeeeecccCC
Q 020621 115 PD--------RVKALVNLGVAYM 129 (323)
Q Consensus 115 p~--------~v~~lvl~~~~~~ 129 (323)
++ .++++|+++|+..
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccccccccccccceEEEeccceE
Confidence 42 5899998888753
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=8.2e-26 Score=182.25 Aligned_cols=265 Identities=17% Similarity=0.186 Sum_probs=151.9
Q ss_pred eeEEEE-CCeeEEEeec------CCCCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCC--
Q 020621 6 HRRVHT-NGIWMHIAEK------GQGPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESY-- 74 (323)
Q Consensus 6 ~~~~~~-~g~~~~~~~~------g~~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~-- 74 (323)
.+.+++ ||..+.+.-. .+.|+||++||++++... +..++..|.++||+|+++|+||||.+..... ..+
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~ 111 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHS 111 (324)
T ss_pred eeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECC
Confidence 344555 7776554321 135899999999887443 4568899999999999999999998754321 111
Q ss_pred -cHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccc--cceeeeecccCCCCCCCCCchHHHHHhhhcceee
Q 020621 75 -TIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDR--VKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYI 151 (323)
Q Consensus 75 -~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (323)
..+|....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++....... ..+.....
T Consensus 112 ~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~----~~~~~~~~----- 182 (324)
T PRK10985 112 GETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS----YRMEQGFS----- 182 (324)
T ss_pred CchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH----HHHhhhHH-----
Confidence 2233333333333445667899999999999988888877543 89999999876431110 00000000
Q ss_pred eeccCCcchhhhcccccHHHHHHHHHhhc--CCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc--cCcchh
Q 020621 152 SQFQEPGVAEKSFSKYDSLTVLKKLLLVN--APDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA--TGFTGA 227 (323)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 227 (323)
..+.......+........ ..+.. ....... .....+..+.+.+.. .++...
T Consensus 183 ----------~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~------------~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 183 ----------RVYQRYLLNLLKANAARKLAAYPGTL--PINLAQL------------KSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhccccc--cCCHHHH------------hcCCcHHHHhhhheeccCCCCCH
Confidence 0000000000000000000 00000 0000000 001112222222222 255555
Q ss_pred hHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhch-----
Q 020621 228 LNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKA----- 302 (323)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----- 302 (323)
..++...+.... .. ++++|+++|+|++|++++++.. ..+.+..+++++++++++||+.+++..
T Consensus 239 ~~~y~~~~~~~~--l~----~i~~P~lii~g~~D~~~~~~~~------~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 239 IDYYRQCSALPL--LN----QIRKPTLIIHAKDDPFMTHEVI------PKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred HHHHHHCChHHH--Hh----CCCCCEEEEecCCCCCCChhhC------hHHHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 666654332211 12 8999999999999999987753 344566788999999999999998742
Q ss_pred HHHHHHHHHHhhhc
Q 020621 303 EQITEEILSHFRKK 316 (323)
Q Consensus 303 ~~~~~~i~~fl~~~ 316 (323)
...-+.+.+|++..
T Consensus 307 ~w~~~~~~~~~~~~ 320 (324)
T PRK10985 307 MWLEQRIPDWLTTY 320 (324)
T ss_pred ccHHHHHHHHHHHh
Confidence 46777788888654
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=2.3e-25 Score=183.64 Aligned_cols=216 Identities=17% Similarity=0.131 Sum_probs=138.4
Q ss_pred CCCeEEEEcccCCCc-hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---CCccEEEE
Q 020621 23 QGPLVLLIHGFPELW-SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL---GEEQAFVV 98 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~---~~~~~~lv 98 (323)
+.|+||++||+++.. ..|..+.+.|+++||.|+++|+||+|.|.... ...+......++.+++... +.+++.++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~ 270 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAF 270 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEE
Confidence 346677666766653 57888889999999999999999999996543 1223444445555555544 55799999
Q ss_pred EechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHh
Q 020621 99 GHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLL 178 (323)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (323)
|||+||.+|+.+|..+|++|+++|+++++...... ....... +... ....+...+.
T Consensus 271 G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~---~~~~~~~--------------------~p~~-~~~~la~~lg 326 (414)
T PRK05077 271 GFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT---DPKRQQQ--------------------VPEM-YLDVLASRLG 326 (414)
T ss_pred EEChHHHHHHHHHHhCCcCceEEEEECCccchhhc---chhhhhh--------------------chHH-HHHHHHHHhC
Confidence 99999999999999999999999999887532100 0000000 0000 0000000000
Q ss_pred hcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEec
Q 020621 179 VNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIG 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G 258 (323)
. ...+.+.+......+ ..... . ... +++++|+|+|+|
T Consensus 327 ~-------------------------~~~~~~~l~~~l~~~---sl~~~----------~-~l~----~~i~~PvLiI~G 363 (414)
T PRK05077 327 M-------------------------HDASDEALRVELNRY---SLKVQ----------G-LLG----RRCPTPMLSGYW 363 (414)
T ss_pred C-------------------------CCCChHHHHHHhhhc---cchhh----------h-hhc----cCCCCcEEEEec
Confidence 0 000111111111100 00000 0 000 179999999999
Q ss_pred CCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 259 DKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
++|.++|++. .+.+.+..+++++++++++ ++.+.++++.+.+.+||++.
T Consensus 364 ~~D~ivP~~~------a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEED------SRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHH------HHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999887 4666777899999999986 56679999999999999875
No 51
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=6.2e-25 Score=178.71 Aligned_cols=302 Identities=16% Similarity=0.171 Sum_probs=172.3
Q ss_pred ccceeEEEE-CCeeEEEeecC---------CCCeEEEEcccCCCchhHH------HHHHhhhhcCcEEEeeCCCCCCCCC
Q 020621 3 DINHRRVHT-NGIWMHIAEKG---------QGPLVLLIHGFPELWSCWK------YQINHLAEHGYHVVAPDMRGYGDSD 66 (323)
Q Consensus 3 ~~~~~~~~~-~g~~~~~~~~g---------~~~~lv~~hG~~~~~~~~~------~~~~~l~~~G~~vi~~d~~G~G~s~ 66 (323)
.++.+.+++ ||..+...... ++|+|+++||++.++..|. .+...|+++||+|+++|+||++.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 356777777 99998876632 2579999999999988884 3455688899999999999988763
Q ss_pred CC-------CCCCCCcHHHHH-HHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCcc---ccceeeeecccCCCCC
Q 020621 67 SP-------QDPESYTIFHLV-GDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPD---RVKALVNLGVAYMPRS 132 (323)
Q Consensus 67 ~~-------~~~~~~~~~~~~-~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~ 132 (323)
+. .....+++++++ .|+.++++++ ..++++++|||+||.+++.++ .+|+ +|+++++++|......
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 21 111257888888 7999999986 347999999999999998555 5676 6889999998865433
Q ss_pred CCCCchHHHHHh-hhcc---eeeeeccCCcc-hhhhcccc-cHHHHHHHHHhh-cCCCCcCCCcchhhhccccCCCCCCC
Q 020621 133 PELKPTEIFFKL-YGEG---LYISQFQEPGV-AEKSFSKY-DSLTVLKKLLLV-NAPDIIAAPAGVEIIDFLHTPSSLPE 205 (323)
Q Consensus 133 ~~~~~~~~~~~~-~~~~---~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
........+... .... +-...+..... ........ ........++.. ...+. .-+......+. ...+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~---~~n~~~~~~~~--~~~pa 276 (395)
T PLN02872 202 VTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNC---CFNASRIDYYL--EYEPH 276 (395)
T ss_pred CCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCc---ccchhhhhHHH--hcCCC
Confidence 222211111110 0000 00000100000 00000000 000001111111 11110 00000011110 11233
Q ss_pred CCCHHHHHHHHHhhcccCcchhhHH-HHhhhcc-ccccCccCCCcc--ccceEEEecCCCCCCCCcCccccccchhhhhc
Q 020621 206 WVNLEDLQSWAEKFNATGFTGALNY-YRAMDKN-WELTAPWQGAKI--CVPTKFIIGDKHMGFKSFGTENYIKGDEFKTL 281 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~ 281 (323)
..+-..+.-|.+......+....-- ..+.... ......+++.++ ++|+++++|++|.+++++.. +.+.+.
T Consensus 277 gtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv------~~l~~~ 350 (395)
T PLN02872 277 PSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDV------EHTLAE 350 (395)
T ss_pred cchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHH------HHHHHH
Confidence 4455555666655443333211100 0111100 000111222366 68999999999999988763 555666
Q ss_pred CCC-ceEEEecCCCccc---chhchHHHHHHHHHHhhhc
Q 020621 282 VPD-LEVVVIRDAQHYI---QLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 282 ~~~-~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~ 316 (323)
.++ ++++.++++||.. ..+.|+++.+.|.+|+++.
T Consensus 351 Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 351 LPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 666 6888999999964 4488999999999999865
No 52
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=6.5e-24 Score=163.79 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=90.4
Q ss_pred EEEE-CCeeEEEeecC-------CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCC-CCCCCCCCCCCCcHHH
Q 020621 8 RVHT-NGIWMHIAEKG-------QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY-GDSDSPQDPESYTIFH 78 (323)
Q Consensus 8 ~~~~-~g~~~~~~~~g-------~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~~~~~~~~ 78 (323)
.+.+ +|..|.-.... +.++||++||++++...+..+++.|.++||.|+.+|+||+ |.|++.. ...+...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~ 90 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSI 90 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccc
Confidence 3444 77777643322 2378999999999987899999999999999999999988 9997654 3344444
Q ss_pred HHHHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 79 LVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 79 ~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
...|+.++++++ +.+++.|+||||||.+|+..|... .++++|+.+|...
T Consensus 91 g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 91 GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 567776666655 456899999999999998777644 3899999988764
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=4.2e-24 Score=168.08 Aligned_cols=102 Identities=25% Similarity=0.225 Sum_probs=82.4
Q ss_pred CCCeEEEEcccCC----CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-----CCc
Q 020621 23 QGPLVLLIHGFPE----LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL-----GEE 93 (323)
Q Consensus 23 ~~~~lv~~hG~~~----~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-----~~~ 93 (323)
+++++|++||++. +...|..+++.|+++||+|+++|+||||.|... ..+++++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 4568888887653 344567788999999999999999999998743 246677888888888776 456
Q ss_pred cEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+++++|||+||.+++.+|.. +++|+++|+++|...
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 89999999999999999865 468999999998654
No 54
>PRK10566 esterase; Provisional
Probab=99.93 E-value=7e-24 Score=165.63 Aligned_cols=124 Identities=22% Similarity=0.284 Sum_probs=82.6
Q ss_pred CcccceeEEEECCeeEEEeecC----CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCC--
Q 020621 1 MIDINHRRVHTNGIWMHIAEKG----QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESY-- 74 (323)
Q Consensus 1 m~~~~~~~~~~~g~~~~~~~~g----~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~-- 74 (323)
|.+++...+. +...++|...+ +.|+||++||++++...|..+++.|+++||.|+++|+||+|.+.........
T Consensus 1 ~~~~~~~~~~-~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~ 79 (249)
T PRK10566 1 MIEIETRELA-GIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNH 79 (249)
T ss_pred CeEEEEEEec-CcceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhh
Confidence 4444433321 33335555543 3589999999999998999999999999999999999999986432110111
Q ss_pred ---cHHHHHHHHHHHHHHh------CCccEEEEEechHHHHHHHHHhhCccccceeeeec
Q 020621 75 ---TIFHLVGDLIGLLDEL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 75 ---~~~~~~~~i~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
...+..+++.++++.+ +.++++++|||+||.+++.++.++|+....+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 80 FWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 0112234444444432 44689999999999999999998886333334333
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.92 E-value=3e-24 Score=179.41 Aligned_cols=258 Identities=12% Similarity=0.052 Sum_probs=147.3
Q ss_pred CCCeEEEEcccCCCchhHH-----HHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEE
Q 020621 23 QGPLVLLIHGFPELWSCWK-----YQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFV 97 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~-----~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~l 97 (323)
..+|||++||+......|+ .+++.|.++||+|+++|++|+|.|........|..+.+.+.+..+.+.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 3589999999998888775 78999999999999999999999876543345555667777888888889999999
Q ss_pred EEechHHHHHH----HHHhhC-ccccceeeeecccCCCCCCCCC-------chHHHHHhhhcceeeeeccCCcchhhhcc
Q 020621 98 VGHDWGAQIAW----NLCLFR-PDRVKALVNLGVAYMPRSPELK-------PTEIFFKLYGEGLYISQFQEPGVAEKSFS 165 (323)
Q Consensus 98 vG~S~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (323)
+||||||.++. .+++.. +++|+++++++++......... ..+.+........ ......+...+.
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G----~lpg~~m~~~F~ 342 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGG----YLDGRQMAVTFS 342 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcC----CCCHHHHHHHHH
Confidence 99999999852 345554 7899999999987654332110 0011111111100 001111111122
Q ss_pred cccHHHHHHH-HHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCcc
Q 020621 166 KYDSLTVLKK-LLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPW 244 (323)
Q Consensus 166 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (323)
.......+.. +......+..... ..+..+..... .+..+....|...+-..+.... ..+.. .....
T Consensus 343 ~lrp~~l~w~~~v~~yl~g~~~~~--fdll~Wn~D~t----~lP~~~~~~~lr~ly~~N~L~~-G~~~v------~g~~~ 409 (532)
T TIGR01838 343 LLRENDLIWNYYVDNYLKGKSPVP--FDLLFWNSDST----NLPGKMHNFYLRNLYLQNALTT-GGLEV------CGVRL 409 (532)
T ss_pred hcChhhHHHHHHHHHHhcCCCccc--hhHHHHhccCc----cchHHHHHHHHHHHHhcCCCcC-CeeEE------CCEec
Confidence 2222211111 1110000000000 00111111111 1122222223222111111000 00000 00112
Q ss_pred CCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchH
Q 020621 245 QGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAE 303 (323)
Q Consensus 245 ~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 303 (323)
.+.+|++|+++|.|++|.++|++. ...+.+..++.+..+++++||.+++++|.
T Consensus 410 dL~~I~vPvLvV~G~~D~IvP~~s------a~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 410 DLSKVKVPVYIIATREDHIAPWQS------AYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred chhhCCCCEEEEeeCCCCcCCHHH------HHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 223899999999999999999876 35566778888999999999999998763
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=7.6e-24 Score=156.45 Aligned_cols=89 Identities=25% Similarity=0.200 Sum_probs=75.1
Q ss_pred CeEEEEcccCCCchhHHH--HHHhhhhc--CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEe
Q 020621 25 PLVLLIHGFPELWSCWKY--QINHLAEH--GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGH 100 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~--~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~ 100 (323)
|+||++||++++...|.. +...+.+. +|+|+++|+||+| ++.++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689999999999999984 33555542 6999999999884 357889999999999999999999
Q ss_pred chHHHHHHHHHhhCccccceeeeecccCC
Q 020621 101 DWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
||||.+++.+|.++|. .+|+++|+..
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 9999999999999983 4688887644
No 57
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.91 E-value=5.5e-23 Score=151.37 Aligned_cols=103 Identities=25% Similarity=0.406 Sum_probs=88.4
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC---CccEEEE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG---EEQAFVV 98 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~---~~~~~lv 98 (323)
.+|.+++.||+|.+.-+|..++++|... ..+|+++|+||||.+...+. ...+.+.++.|+.++++.+- ..+++||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 5899999999999999999999988765 46788899999999977664 57899999999999999872 3489999
Q ss_pred EechHHHHHHHHHhh--Cccccceeeeeccc
Q 020621 99 GHDWGAQIAWNLCLF--RPDRVKALVNLGVA 127 (323)
Q Consensus 99 G~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~ 127 (323)
||||||.+|.+.|.. -|. +.+++.++..
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999887754 454 8899988854
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=9e-25 Score=168.94 Aligned_cols=76 Identities=34% Similarity=0.513 Sum_probs=70.9
Q ss_pred cEEEeeCCCCCCCCCC--CCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeeccc
Q 020621 52 YHVVAPDMRGYGDSDS--PQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127 (323)
Q Consensus 52 ~~vi~~d~~G~G~s~~--~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 127 (323)
|+|+++|+||+|.|++ ......++..++++++..+++.++.++++++||||||.+++.+|+++|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999995 144478999999999999999999999999999999999999999999999999999986
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.90 E-value=1.2e-23 Score=171.72 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=82.3
Q ss_pred CCeEEEEcccCCCchhH-----HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH-H----HHHHHHhCCc
Q 020621 24 GPLVLLIHGFPELWSCW-----KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD-L----IGLLDELGEE 93 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~-----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~-i----~~~l~~~~~~ 93 (323)
+++||++||+..+...+ ..+++.|.++||+|+++|++|+|.|.. ..++++++.+ + ..+.+..+.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999987655444 578999999999999999999998753 3355555433 4 3444555778
Q ss_pred cEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+++++||||||.+++.+++.+|++|+++|+++++...
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 9999999999999999999999999999999987754
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=3.1e-22 Score=183.13 Aligned_cols=270 Identities=16% Similarity=0.161 Sum_probs=152.6
Q ss_pred CCCeEEEEcccCCCchhHHHH-----HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCcc
Q 020621 23 QGPLVLLIHGFPELWSCWKYQ-----INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE---LGEEQ 94 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~-----~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---~~~~~ 94 (323)
.+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.|+.+......++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999865 7889999999999994 666554321246777777777776664 34468
Q ss_pred EEEEEechHHHHHHHHHhhC-ccccceeeeecccCCCCCCCC-CchHHHHHhhhcce----eeeeccCCcc-hhhhcccc
Q 020621 95 AFVVGHDWGAQIAWNLCLFR-PDRVKALVNLGVAYMPRSPEL-KPTEIFFKLYGEGL----YISQFQEPGV-AEKSFSKY 167 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~ 167 (323)
++++||||||.+++.+++.+ +++|+++|+++++........ ........ ....+ .......|.. ....+...
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAA-AAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhh-cccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 99999999999999988755 458999999998764322100 00000000 00000 0000111110 00111111
Q ss_pred cHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhc--ccCcchhhHHHHhhhc---cc----
Q 020621 168 DSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFN--ATGFTGALNYYRAMDK---NW---- 238 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~---- 238 (323)
............ ...+.. ......++....+..... ...........+.+.. ..
T Consensus 222 ~p~~~~~~~~~~--------------~~~l~~---~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~ 284 (994)
T PRK07868 222 DPVKTAKARVDF--------------LRQLHD---REALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGF 284 (994)
T ss_pred ChhHHHHHHHHH--------------HHhcCc---hhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceE
Confidence 111111111100 000000 001111222222222211 0000011111222211 10
Q ss_pred cc-cCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceE-EEecCCCcccch---hchHHHHHHHHHHh
Q 020621 239 EL-TAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEV-VVIRDAQHYIQL---EKAEQITEEILSHF 313 (323)
Q Consensus 239 ~~-~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl 313 (323)
.. .....+.++++|+|+|+|++|.++|++. .+.+.+..+++++ .+++++||+.++ ..++++...|.+||
T Consensus 285 ~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~------~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl 358 (994)
T PRK07868 285 AINGQMVTLADITCPVLAFVGEVDDIGQPAS------VRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWV 358 (994)
T ss_pred EECCEEcchhhCCCCEEEEEeCCCCCCCHHH------HHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHH
Confidence 00 0001223899999999999999999876 4667778899987 678999999765 46889999999999
Q ss_pred hhcccc
Q 020621 314 RKKSII 319 (323)
Q Consensus 314 ~~~~~~ 319 (323)
++++..
T Consensus 359 ~~~~~~ 364 (994)
T PRK07868 359 KWLEGD 364 (994)
T ss_pred HHhccC
Confidence 987643
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=5.7e-22 Score=141.71 Aligned_cols=93 Identities=34% Similarity=0.471 Sum_probs=76.2
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQ 105 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~ 105 (323)
+||++||++++...|..+.+.|+++||.|+++|+||+|.+... ....+..+++. .+..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 6899999999999999999999999999999999999988321 13333333332 1123667999999999999
Q ss_pred HHHHHHhhCccccceeeeecc
Q 020621 106 IAWNLCLFRPDRVKALVNLGV 126 (323)
Q Consensus 106 ~a~~~a~~~p~~v~~lvl~~~ 126 (323)
+++.++.+. .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999988 68999999998
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=2.5e-20 Score=147.54 Aligned_cols=115 Identities=41% Similarity=0.716 Sum_probs=94.3
Q ss_pred EECCeeEEEeecCC-CCeEEEEcccCCCchhHHHHHHhhhh---cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 020621 10 HTNGIWMHIAEKGQ-GPLVLLIHGFPELWSCWKYQINHLAE---HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIG 85 (323)
Q Consensus 10 ~~~g~~~~~~~~g~-~~~lv~~hG~~~~~~~~~~~~~~l~~---~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~ 85 (323)
...+..+.|...+. +|+++++||++++...|......+.. . |+++.+|+||||.|. . ...+....++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~--~--~~~~~~~~~~~~~~ 80 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD--P--AGYSLSAYADDLAA 80 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC--c--ccccHHHHHHHHHH
Confidence 33556677776664 67999999999999999884333332 3 899999999999997 1 13445555999999
Q ss_pred HHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 86 LLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 86 ~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
++++++..+++++|||+||.+++.++.++|++++++|++++...
T Consensus 81 ~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 81 LLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 99999988999999999999999999999999999999997754
No 63
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.87 E-value=1e-20 Score=134.01 Aligned_cols=224 Identities=17% Similarity=0.185 Sum_probs=146.9
Q ss_pred cCCCCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc-c--E
Q 020621 21 KGQGPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE-Q--A 95 (323)
Q Consensus 21 ~g~~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~-~--~ 95 (323)
.|+...+|++||+-++... ...++..|.+.|+.++.+|++|.|.|........+ ...++|+..+++++... + .
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~ 107 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVP 107 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEE
Confidence 3567899999999987653 45567889999999999999999999887754444 45569999999988543 3 3
Q ss_pred EEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHH
Q 020621 96 FVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKK 175 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (323)
+++|||-||.+++.+|.++++ ++.+|.+++.+....... ++ +...........
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~---eR-----------------------lg~~~l~~ike~ 160 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN---ER-----------------------LGEDYLERIKEQ 160 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh---hh-----------------------hcccHHHHHHhC
Confidence 578999999999999999986 888888877665432210 00 000001111111
Q ss_pred HHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEE
Q 020621 176 LLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKF 255 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~ 255 (323)
.+++.-.+.......++++.+......-... ..... ..+||||-
T Consensus 161 ----------------Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~----------------aclkI----d~~C~VLT 204 (269)
T KOG4667|consen 161 ----------------GFIDVGPRKGKYGYRVTEESLMDRLNTDIHE----------------ACLKI----DKQCRVLT 204 (269)
T ss_pred ----------------CceecCcccCCcCceecHHHHHHHHhchhhh----------------hhcCc----CccCceEE
Confidence 1111111112233333444433322211000 00000 67999999
Q ss_pred EecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 256 IIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 256 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
+||..|.++|.+. +..+++..|+-++.++||+.|.....+ .+.......|.+..
T Consensus 205 vhGs~D~IVPve~------AkefAk~i~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 205 VHGSEDEIVPVED------AKEFAKIIPNHKLEIIEGADHNYTGHQ-SQLVSLGLEFIKTR 258 (269)
T ss_pred EeccCCceeechh------HHHHHHhccCCceEEecCCCcCccchh-hhHhhhcceeEEee
Confidence 9999999999987 578899999999999999999765443 34556666665543
No 64
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.87 E-value=4.2e-20 Score=139.73 Aligned_cols=264 Identities=14% Similarity=0.200 Sum_probs=159.7
Q ss_pred eEEEECCeeEEEeecC--C--CCeEEEEcccCCCchh-HHHHH-----HhhhhcCcEEEeeCCCCCCCCCC--CCCCCCC
Q 020621 7 RRVHTNGIWMHIAEKG--Q--GPLVLLIHGFPELWSC-WKYQI-----NHLAEHGYHVVAPDMRGYGDSDS--PQDPESY 74 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g--~--~~~lv~~hG~~~~~~~-~~~~~-----~~l~~~G~~vi~~d~~G~G~s~~--~~~~~~~ 74 (323)
+.+++.-..+++...| + +|++|-.|-.|.+..+ |..++ +.+.++ |.++-+|.||+..-.. +.+..-.
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccccc
Confidence 5677777788888887 3 7899999999988776 77664 566676 9999999999976433 3333456
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeec
Q 020621 75 TIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQF 154 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (323)
|++++++++..++++++++.++.+|-..|+++..++|..+|++|.++||+++.....+. .+.+...+... ++.
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw----~Ew~~~K~~~~-~L~-- 153 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW----MEWFYQKLSSW-LLY-- 153 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H----HHHHHHHHH--------
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH----HHHHHHHHhcc-ccc--
Confidence 89999999999999999999999999999999999999999999999999987654332 22222221110 000
Q ss_pred cCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc-cCcchhhHHHHh
Q 020621 155 QEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA-TGFTGALNYYRA 233 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (323)
...+.......++...|...... .+.+.++.|...+.. .+......+++.
T Consensus 154 ------~~gmt~~~~d~Ll~h~Fg~~~~~-----------------------~n~Dlv~~yr~~l~~~~Np~Nl~~f~~s 204 (283)
T PF03096_consen 154 ------SYGMTSSVKDYLLWHYFGKEEEE-----------------------NNSDLVQTYRQHLDERINPKNLALFLNS 204 (283)
T ss_dssp --------CTTS-HHHHHHHHHS-HHHHH-----------------------CT-HHHHHHHHHHHT-TTHHHHHHHHHH
T ss_pred ------ccccccchHHhhhhccccccccc-----------------------ccHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 00111112222333333221000 134456667666644 455666667777
Q ss_pred hhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhc-CC-CceEEEecCCCcccchhchHHHHHHHHH
Q 020621 234 MDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTL-VP-DLEVVVIRDAQHYIQLEKAEQITEEILS 311 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 311 (323)
...+.+...... ...||+|++.|+..+..... ..+..+ .| +.++..++++|=.+..|+|+.+++.++-
T Consensus 205 y~~R~DL~~~~~--~~~c~vLlvvG~~Sp~~~~v--------v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 205 YNSRTDLSIERP--SLGCPVLLVVGDNSPHVDDV--------VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp HHT-----SECT--TCCS-EEEEEETTSTTHHHH--------HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred HhccccchhhcC--CCCCCeEEEEecCCcchhhH--------HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHH
Confidence 766555543322 66799999999998876421 233333 34 3789999999999999999999999999
Q ss_pred Hhhhcc
Q 020621 312 HFRKKS 317 (323)
Q Consensus 312 fl~~~~ 317 (323)
|++...
T Consensus 275 FlQG~G 280 (283)
T PF03096_consen 275 FLQGMG 280 (283)
T ss_dssp HHHHTT
T ss_pred HHccCC
Confidence 998753
No 65
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.87 E-value=1.3e-19 Score=135.14 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=161.0
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc-cEEEEEechHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE-QAFVVGHDWGA 104 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~-~~~lvG~S~Gg 104 (323)
+||-+||.+|+...|..+.+.|.+.|.++|.+++||+|.+...++ ..++..+...-+.++++.++++ +++.+|||.|+
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 899999999999999999999999999999999999999988775 7899999999999999999887 67889999999
Q ss_pred HHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCC
Q 020621 105 QIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDI 184 (323)
Q Consensus 105 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
-.|+.++..+| +.++++++|+.........+..++...-. ....+........+..++......
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~-------------l~~~lp~~~~~~i~~~~y~~iG~K- 179 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINY-------------LYDLLPRFIINAIMYFYYRMIGFK- 179 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHH-------------HHHHhhHHHHHHHHHHHHHHhCee-
Confidence 99999999996 67999999998766655555443332110 000011111112222222211100
Q ss_pred cCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCC
Q 020621 185 IAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGF 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~ 264 (323)
. -+.+....-...+...++.....+...+. +-++|++++.|.+|.++
T Consensus 180 ------------------V---~~GeeA~na~r~m~~~df~~q~~~I~~ln------------~~~ikvli~ygg~DhLI 226 (297)
T PF06342_consen 180 ------------------V---SDGEEAINAMRSMQNCDFEEQKEYIDKLN------------KKPIKVLIAYGGKDHLI 226 (297)
T ss_pred ------------------e---cChHHHHHHHHHHHhcCHHHHHHHHHHhc------------cCCCcEEEEEcCcchhh
Confidence 0 01223333333444445555555555444 45589999999999997
Q ss_pred CCcCccccccc------------------hhhhhcC---CCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 265 KSFGTENYIKG------------------DEFKTLV---PDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 265 ~~~~~~~~~~~------------------~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
..+...++... ..+.+.+ .....+.|.+.||+.+-.+++.+++.+...|+
T Consensus 227 EeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 227 EEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 65543322100 0011111 12234556667999999999999999887663
No 66
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=3.7e-20 Score=146.30 Aligned_cols=268 Identities=17% Similarity=0.183 Sum_probs=161.4
Q ss_pred cceeEEEE-CCeeEEEeec-----------CCCCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCCCCC
Q 020621 4 INHRRVHT-NGIWMHIAEK-----------GQGPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSDSPQ 69 (323)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~-----------g~~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~ 69 (323)
.+++.+++ ||..+.+.-. +..|.||++||+.+++.. -+.++..+.+.||+|++++.||+|.|.-..
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 45677777 8888766432 245899999999876543 356677788889999999999999986544
Q ss_pred CCCCCcHHHHHHHHHHHHHHh----CCccEEEEEechHHHHHHHHHhhCcc--ccceeeeecccCCCCCCCCCchHHHHH
Q 020621 70 DPESYTIFHLVGDLIGLLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALVNLGVAYMPRSPELKPTEIFFK 143 (323)
Q Consensus 70 ~~~~~~~~~~~~~i~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~ 143 (323)
. ..-..-..+|+.++++++ ...++..+|.||||++.+.|.....+ .+.+.+.++.+...... ...+..
T Consensus 173 p--r~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~----~~~~~~ 246 (409)
T KOG1838|consen 173 P--RLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA----SRSIET 246 (409)
T ss_pred C--ceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh----hhHHhc
Confidence 1 221223345555555554 45589999999999999999987544 35555556655442100 000000
Q ss_pred hhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc--
Q 020621 144 LYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA-- 221 (323)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (323)
.....+..+.+.....+.........+. .............++++-+.+..
T Consensus 247 -----------------------~~~~~~y~~~l~~~l~~~~~~~r~~~~~----~~vd~d~~~~~~SvreFD~~~t~~~ 299 (409)
T KOG1838|consen 247 -----------------------PLYRRFYNRALTLNLKRIVLRHRHTLFE----DPVDFDVILKSRSVREFDEALTRPM 299 (409)
T ss_pred -----------------------ccchHHHHHHHHHhHHHHHhhhhhhhhh----ccchhhhhhhcCcHHHHHhhhhhhh
Confidence 0001111111111000000000000000 00001111122445555555543
Q ss_pred cCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhc
Q 020621 222 TGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEK 301 (323)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 301 (323)
.++.....||+..+...... +|.+|+|+|++.+|+++|++.+ .....+..|++-+.+-..+||..++|.
T Consensus 300 ~gf~~~deYY~~aSs~~~v~------~I~VP~L~ina~DDPv~p~~~i-----p~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 300 FGFKSVDEYYKKASSSNYVD------KIKVPLLCINAADDPVVPEEAI-----PIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cCCCcHHHHHhhcchhhhcc------cccccEEEEecCCCCCCCcccC-----CHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 56777888888877766665 8999999999999999998765 456667788888888888899998885
Q ss_pred ----hHHHHHH-HHHHhhh
Q 020621 302 ----AEQITEE-ILSHFRK 315 (323)
Q Consensus 302 ----~~~~~~~-i~~fl~~ 315 (323)
+....+. +.+|+..
T Consensus 369 ~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 369 LWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred CCCccchhHHHHHHHHHHH
Confidence 2223333 6666654
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=2e-20 Score=144.93 Aligned_cols=286 Identities=17% Similarity=0.124 Sum_probs=170.6
Q ss_pred CCeeEEEeecCC-----CCeEEEEcccCCCch-----------hHHHHH---HhhhhcCcEEEeeCCCCCC-CCCCCC--
Q 020621 12 NGIWMHIAEKGQ-----GPLVLLIHGFPELWS-----------CWKYQI---NHLAEHGYHVVAPDMRGYG-DSDSPQ-- 69 (323)
Q Consensus 12 ~g~~~~~~~~g~-----~~~lv~~hG~~~~~~-----------~~~~~~---~~l~~~G~~vi~~d~~G~G-~s~~~~-- 69 (323)
++.+|.|+.+|. .+.|+++|++.++.. .|..++ +.+.-..|.||+.|..|.+ .|..+.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 566789999982 468999999998543 355554 2344445999999999865 343332
Q ss_pred ---------CCCCCcHHHHHHHHHHHHHHhCCccEE-EEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchH
Q 020621 70 ---------DPESYTIFHLVGDLIGLLDELGEEQAF-VVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTE 139 (323)
Q Consensus 70 ---------~~~~~~~~~~~~~i~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 139 (323)
++..+++.|+++.-..+++++|++++. +||-|||||.|+.++..+|++|+++|.++++...........+
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 234578999999989999999999987 8899999999999999999999999999987655443333333
Q ss_pred HHHHhhhcceee--eeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCC---CCCCCCCHHHHHH
Q 020621 140 IFFKLYGEGLYI--SQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPS---SLPEWVNLEDLQS 214 (323)
Q Consensus 140 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 214 (323)
..++.+...-.+ ..+.....++.. +...+.+..+... ....+.+.+.... ..........++.
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~G---L~~AR~l~~ltYr---------S~~~~~~rF~r~~~~~~~~~~~~~f~vES 261 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERG---LRLARMLAHLTYR---------SEEELDERFGRRLQADPLRGGGVRFAVES 261 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchh---HHHHHHHHHHHcc---------CHHHHHHHhcccccccccCCCchhHHHHH
Confidence 344333211111 001110011111 1111111111100 0001111111100 0000012334444
Q ss_pred HHHhh--------cccCcchhhHHHHhhhccccc-cCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCc
Q 020621 215 WAEKF--------NATGFTGALNYYRAMDKNWEL-TAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDL 285 (323)
Q Consensus 215 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
|.... ....+......+...+..... .....++.+++|++++.-+.|.++|++. .+.+.+.++.+
T Consensus 262 YL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~------~~~~~~~L~~~ 335 (368)
T COG2021 262 YLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPEL------QRALAEALPAA 335 (368)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHH------HHHHHHhcccc
Confidence 44332 222222222223333332221 0011123799999999999999999987 46777777776
Q ss_pred e-EEEe-cCCCcccchhchHHHHHHHHHHhhh
Q 020621 286 E-VVVI-RDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 286 ~-~~~~-~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
. ++++ ...||-.++...+.+...|..||+.
T Consensus 336 ~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 336 GALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 5 6666 4569999999988999999999975
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=2.9e-20 Score=142.23 Aligned_cols=179 Identities=15% Similarity=0.138 Sum_probs=118.9
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC---------CCCCC---cHHHHHHHHHHHHHH-
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ---------DPESY---TIFHLVGDLIGLLDE- 89 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~---------~~~~~---~~~~~~~~i~~~l~~- 89 (323)
..|+||++||++++...|.++.+.|...++.+..++.+|...+.... ..... .+.+..+.+.++++.
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999998765555555555543221100 00011 122333333333333
Q ss_pred ---hC--CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhc
Q 020621 90 ---LG--EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSF 164 (323)
Q Consensus 90 ---~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (323)
.+ .++++++|||+||.+++.++.++|+.+.+++.+++.... .+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-~~------------------------------- 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-LP------------------------------- 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-cc-------------------------------
Confidence 23 347999999999999999999999877877766542110 00
Q ss_pred ccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCcc
Q 020621 165 SKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPW 244 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (323)
. ..
T Consensus 143 -------------------------------------------~---------------------------------~~- 145 (232)
T PRK11460 143 -------------------------------------------E---------------------------------TA- 145 (232)
T ss_pred -------------------------------------------c---------------------------------cc-
Confidence 0 00
Q ss_pred CCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 245 QGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 245 ~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
....|+++++|++|.++|.+..++. .+.+.+...++++++++++||.+..+..+.+.+.+.++|..
T Consensus 146 ---~~~~pvli~hG~~D~vvp~~~~~~~--~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 146 ---PTATTIHLIHGGEDPVIDVAHAVAA--QEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred ---cCCCcEEEEecCCCCccCHHHHHHH--HHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 4567999999999999998875443 23444444568899999999998766666666666666643
No 69
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=2.8e-20 Score=136.02 Aligned_cols=226 Identities=15% Similarity=0.150 Sum_probs=149.6
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH-HhCCccEEEEEec
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD-ELGEEQAFVVGHD 101 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~~lvG~S 101 (323)
..+.++++|-.|+++..|+.+...|... ..++.+++||+|.....+ ...+++++++.+...+. ....+++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 4568999999999999999999999886 999999999999886666 67899999999998888 4556799999999
Q ss_pred hHHHHHHHHHhhCc---cccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHh
Q 020621 102 WGAQIAWNLCLFRP---DRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLL 178 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (323)
|||++|.++|.+.. -...++.+.+........ ...+....-..+++.+..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~---------------------------~~~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR---------------------------GKQIHHLDDADFLADLVD 135 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc---------------------------cCCccCCCHHHHHHHHHH
Confidence 99999999998742 125666666533221110 011122223333443333
Q ss_pred hcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEec
Q 020621 179 VNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIG 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G 258 (323)
.....+ ..+.+.++....-...+.. ++........... .++||+.++.|
T Consensus 136 lgG~p~--------------------e~led~El~~l~LPilRAD-------~~~~e~Y~~~~~~----pl~~pi~~~~G 184 (244)
T COG3208 136 LGGTPP--------------------ELLEDPELMALFLPILRAD-------FRALESYRYPPPA----PLACPIHAFGG 184 (244)
T ss_pred hCCCCh--------------------HHhcCHHHHHHHHHHHHHH-------HHHhcccccCCCC----CcCcceEEecc
Confidence 221110 1111222222211111111 1111111111111 79999999999
Q ss_pred CCCCCCCCcCccccccchhhhhcCC-CceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 259 DKHMGFKSFGTENYIKGDEFKTLVP-DLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
++|..++.+.+ ..+.+... ..++.+++| ||+...++.+++.+.|.+.+...
T Consensus 185 ~~D~~vs~~~~------~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 185 EKDHEVSRDEL------GAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred CcchhccHHHH------HHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhhh
Confidence 99999998764 33344443 579999987 99999999999999999999743
No 70
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=1.4e-19 Score=137.83 Aligned_cols=246 Identities=23% Similarity=0.254 Sum_probs=144.2
Q ss_pred CCCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCccEE
Q 020621 23 QGPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQAF 96 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~~~ 96 (323)
..|.||++||+.|++.+ -+.+.+.+.++||.++++|.|||+.+..... .-++ .-.-+|+..+++.+ ...++.
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh-~G~t~D~~~~l~~l~~~~~~r~~~ 151 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYH-SGETEDIRFFLDWLKARFPPRPLY 151 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceec-ccchhHHHHHHHHHHHhCCCCceE
Confidence 46899999999876443 3566788999999999999999999865321 1111 11225555555554 556899
Q ss_pred EEEechHH-HHHHHHHhhCcc-ccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcc-cccHHHHH
Q 020621 97 VVGHDWGA-QIAWNLCLFRPD-RVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFS-KYDSLTVL 173 (323)
Q Consensus 97 lvG~S~Gg-~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 173 (323)
.+|.|+|| +++..++..-.+ .+.+.+.++.+... ......+... +. ......+.
T Consensus 152 avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl--------~~~~~~l~~~---------------~s~~ly~r~l~ 208 (345)
T COG0429 152 AVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL--------EACAYRLDSG---------------FSLRLYSRYLL 208 (345)
T ss_pred EEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH--------HHHHHHhcCc---------------hhhhhhHHHHH
Confidence 99999999 555555543222 45666666554332 0000000000 00 11111111
Q ss_pred HHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHH------HHHHHHhh--cccCcchhhHHHHhhhccccccCccC
Q 020621 174 KKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLED------LQSWAEKF--NATGFTGALNYYRAMDKNWELTAPWQ 245 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
+.+....... ..++ ....+... .+. +..+-..+ ...++.+...||+..+......
T Consensus 209 ~~L~~~~~~k---------l~~l---~~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~---- 271 (345)
T COG0429 209 RNLKRNAARK---------LKEL---EPSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLP---- 271 (345)
T ss_pred HHHHHHHHHH---------HHhc---CcccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccc----
Confidence 1111110000 0000 00000000 111 12222222 2357888888888887776665
Q ss_pred CCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchh----chH-HHHHHHHHHhhhcc
Q 020621 246 GAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLE----KAE-QITEEILSHFRKKS 317 (323)
Q Consensus 246 ~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 317 (323)
+|.+|+|+|++.+|++++++.+. ..-....|++.+..-+.+||..++. +|. ..-+.+.+||+...
T Consensus 272 --~Ir~PtLii~A~DDP~~~~~~iP-----~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 272 --KIRKPTLIINAKDDPFMPPEVIP-----KLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred --ccccceEEEecCCCCCCChhhCC-----cchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 89999999999999999987653 2223377889999999999999887 443 66778888887653
No 71
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.85 E-value=8.3e-19 Score=130.62 Aligned_cols=268 Identities=18% Similarity=0.211 Sum_probs=182.9
Q ss_pred ceeEEEECCeeEEEeecC----CCCeEEEEcccCCCchh-HHHH-----HHhhhhcCcEEEeeCCCCCCCCC--CCCCCC
Q 020621 5 NHRRVHTNGIWMHIAEKG----QGPLVLLIHGFPELWSC-WKYQ-----INHLAEHGYHVVAPDMRGYGDSD--SPQDPE 72 (323)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g----~~~~lv~~hG~~~~~~~-~~~~-----~~~l~~~G~~vi~~d~~G~G~s~--~~~~~~ 72 (323)
+.+.|.+.-..+++...| ++|++|-.|..+.+..+ |..+ +..+.++ |.|+-+|-|||-... -+.+..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCC
Confidence 456666655677877776 36889999999988766 6655 3667777 999999999995543 333334
Q ss_pred CCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeee
Q 020621 73 SYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYIS 152 (323)
Q Consensus 73 ~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (323)
-.+.++++++|..++++++.+.++-+|.-.|+++..++|..||++|.++||+++.+...++ .+.....+.
T Consensus 102 yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw----iew~~~K~~------ 171 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW----IEWAYNKVS------ 171 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH----HHHHHHHHH------
Confidence 5699999999999999999999999999999999999999999999999999987654332 122211110
Q ss_pred eccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcc-cCcchhhHHH
Q 020621 153 QFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNA-TGFTGALNYY 231 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 231 (323)
...+...........++....... .....+.+.++.|...+.. .+......++
T Consensus 172 --------s~~l~~~Gmt~~~~d~ll~H~Fg~------------------e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl 225 (326)
T KOG2931|consen 172 --------SNLLYYYGMTQGVKDYLLAHHFGK------------------EELGNNSDIVQEYRQHLGERLNPKNLALFL 225 (326)
T ss_pred --------HHHHHhhchhhhHHHHHHHHHhcc------------------ccccccHHHHHHHHHHHHhcCChhHHHHHH
Confidence 000111112222222222111100 0011245666777777654 4446666677
Q ss_pred HhhhccccccCccC--CCccccceEEEecCCCCCCCCcCccccccchhhhhcC-C-CceEEEecCCCcccchhchHHHHH
Q 020621 232 RAMDKNWELTAPWQ--GAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV-P-DLEVVVIRDAQHYIQLEKAEQITE 307 (323)
Q Consensus 232 ~~~~~~~~~~~~~~--~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~~~~~~~ 307 (323)
.....+.+...... ...++||+|++.|++.+.+..- ....... | +.++..+.++|-.+..++|..+++
T Consensus 226 ~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~v--------v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~e 297 (326)
T KOG2931|consen 226 NAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAV--------VECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAE 297 (326)
T ss_pred HHhcCCCCccccCCCcCccccccEEEEecCCCchhhhh--------hhhhcccCcccceEEEEcccCCcccccCchHHHH
Confidence 77776666543222 1246699999999999887532 2233333 3 378899999999999999999999
Q ss_pred HHHHHhhhcc
Q 020621 308 EILSHFRKKS 317 (323)
Q Consensus 308 ~i~~fl~~~~ 317 (323)
.+.-|++...
T Consensus 298 a~~~FlqG~G 307 (326)
T KOG2931|consen 298 AFKYFLQGMG 307 (326)
T ss_pred HHHHHHccCC
Confidence 9999998753
No 72
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=6.6e-20 Score=134.97 Aligned_cols=190 Identities=17% Similarity=0.136 Sum_probs=129.7
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--CccEEEEEe
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG--EEQAFVVGH 100 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~lvG~ 100 (323)
.++++++||...+-.....+...|..+ +++++++|+.|+|.|.+.+. ..+..+.++.+.+.++.-. .++++|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 489999999976655555555566552 59999999999999998773 3344344444444444333 568999999
Q ss_pred chHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhc
Q 020621 101 DWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVN 180 (323)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (323)
|+|+..++.+|++.| ++++||.+|....... ..+.....
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv----------~~~~~~~~----------------------------- 176 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV----------AFPDTKTT----------------------------- 176 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhhhhh----------hccCcceE-----------------------------
Confidence 999999999999998 9999999986532111 00000000
Q ss_pred CCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCC
Q 020621 181 APDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDK 260 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~ 260 (323)
.+.+.+ .. .. ....++||+|++||++
T Consensus 177 -----------~~~d~f----------------------------------~~-----i~----kI~~i~~PVLiiHgtd 202 (258)
T KOG1552|consen 177 -----------YCFDAF----------------------------------PN-----IE----KISKITCPVLIIHGTD 202 (258)
T ss_pred -----------Eeeccc----------------------------------cc-----cC----cceeccCCEEEEeccc
Confidence 000000 00 00 0017899999999999
Q ss_pred CCCCCCcCccccccchhhhhcCCC-ceEEEecCCCcccchhchHHHHHHHHHHhhhcc
Q 020621 261 HMGFKSFGTENYIKGDEFKTLVPD-LEVVVIRDAQHYIQLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 317 (323)
|.+++... ..++.+..++ .+..++.|+||.-. +...++.+.+..|+....
T Consensus 203 Devv~~sH------g~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 203 DEVVDFSH------GKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFISSVL 253 (258)
T ss_pred Cceecccc------cHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 99999886 5667777766 48889999999654 444477788999987654
No 73
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=1.1e-19 Score=139.87 Aligned_cols=104 Identities=19% Similarity=0.150 Sum_probs=87.3
Q ss_pred CCeEEEEcccCCC----chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCccEE
Q 020621 24 GPLVLLIHGFPEL----WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE---LGEEQAF 96 (323)
Q Consensus 24 ~~~lv~~hG~~~~----~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~~ 96 (323)
.++||++||++.. ...|..+++.|+++||+|+.+|+||||.|.... ...++.++++|+.++++. .+.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 346777889999999999999999999997654 345777888887776544 4667999
Q ss_pred EEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 97 VVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 97 lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
++||||||.+++.++.++|++++++|+++|...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999998654
No 74
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=1.5e-19 Score=137.44 Aligned_cols=197 Identities=19% Similarity=0.208 Sum_probs=121.0
Q ss_pred HHHHHHhhhhcCcEEEeeCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHHHh------CCccEEEEEechHHHHHHHHH
Q 020621 40 WKYQINHLAEHGYHVVAPDMRGYGDSDSPQ--DPESYTIFHLVGDLIGLLDEL------GEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 40 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~i~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a 111 (323)
|....+.|+++||.|+.+|+||.+...... ......-...++|+.++++.+ +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 345567888999999999999988543211 001112223455555555544 346899999999999999999
Q ss_pred hhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcch
Q 020621 112 LFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGV 191 (323)
Q Consensus 112 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
.++|+++++++..++............. +. . ......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~----------------------------~--~~~~~~------------ 119 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI-YT----------------------------K--AEYLEY------------ 119 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC-HH----------------------------H--GHHHHH------------
T ss_pred cccceeeeeeeccceecchhcccccccc-cc----------------------------c--cccccc------------
Confidence 9999999999999987654322000000 00 0 000000
Q ss_pred hhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCc--cccceEEEecCCCCCCCCcCc
Q 020621 192 EIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAK--ICVPTKFIIGDKHMGFKSFGT 269 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Pvl~i~G~~D~~~~~~~~ 269 (323)
.........+.......... + +++|+|+++|++|..||+...
T Consensus 120 ------------------------------~~~~~~~~~~~~~s~~~~~~------~~~~~~P~li~hG~~D~~Vp~~~s 163 (213)
T PF00326_consen 120 ------------------------------GDPWDNPEFYRELSPISPAD------NVQIKPPVLIIHGENDPRVPPSQS 163 (213)
T ss_dssp ------------------------------SSTTTSHHHHHHHHHGGGGG------GCGGGSEEEEEEETTBSSSTTHHH
T ss_pred ------------------------------Cccchhhhhhhhhccccccc------cccCCCCEEEEccCCCCccCHHHH
Confidence 00000001111111111111 4 789999999999999999887
Q ss_pred cccccchhhhhcCCCceEEEecCCCcccc-hhchHHHHHHHHHHhhhcc
Q 020621 270 ENYIKGDEFKTLVPDLEVVVIRDAQHYIQ-LEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 317 (323)
.++. +.+.+...+++++++|++||.+. .+...+..+.+.+||++..
T Consensus 164 ~~~~--~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 164 LRLY--NALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHH--HHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHH--HHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 6663 56666666799999999999654 4566788899999998763
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.82 E-value=8.1e-19 Score=138.43 Aligned_cols=107 Identities=23% Similarity=0.287 Sum_probs=77.1
Q ss_pred CCCeEEEEcccCCCchhHHH---HHHhhhhcCcEEEeeCCCCCCCC-----CC------C-----CC--------CCCCc
Q 020621 23 QGPLVLLIHGFPELWSCWKY---QINHLAEHGYHVVAPDMRGYGDS-----DS------P-----QD--------PESYT 75 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~---~~~~l~~~G~~vi~~d~~G~G~s-----~~------~-----~~--------~~~~~ 75 (323)
..|+|+++||++++...|.. +...+...|+.|+.+|..++|.. .. . .. ...+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 35899999999998877754 33556677999999999877621 00 0 00 00112
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
.+++...+....+.++.++++++||||||..|+.++.++|+++++++++++...
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 334444444555556778999999999999999999999999999999988754
No 76
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=4.5e-18 Score=134.04 Aligned_cols=107 Identities=26% Similarity=0.440 Sum_probs=78.5
Q ss_pred CCCeEEEEcccCCCchhHHHH--HHhh-hhcCcEEEeeCC--CCCCCCCCCC------------------CCCCCcHHH-
Q 020621 23 QGPLVLLIHGFPELWSCWKYQ--INHL-AEHGYHVVAPDM--RGYGDSDSPQ------------------DPESYTIFH- 78 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~--~~~l-~~~G~~vi~~d~--~G~G~s~~~~------------------~~~~~~~~~- 78 (323)
+.|+|+++||++++...|... +..+ .+.|+.|+++|. +|+|.+.... ....++..+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 358999999999998888543 3444 445899999998 5555332100 001223333
Q ss_pred HHHHHHHHHHH---hCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 79 LVGDLIGLLDE---LGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 79 ~~~~i~~~l~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
.++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 46777777776 3556899999999999999999999999999999988754
No 77
>PLN00021 chlorophyllase
Probab=99.81 E-value=1.2e-18 Score=137.97 Aligned_cols=106 Identities=25% Similarity=0.385 Sum_probs=77.9
Q ss_pred CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-------hCCcc
Q 020621 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE-------LGEEQ 94 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-------~~~~~ 94 (323)
++.|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 356899999999999999999999999999999999999875432111 111122223333332222 23468
Q ss_pred EEEEEechHHHHHHHHHhhCcc-----ccceeeeecccCC
Q 020621 95 AFVVGHDWGAQIAWNLCLFRPD-----RVKALVNLGVAYM 129 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 129 (323)
++++|||+||.+|+.+|..+++ +++++|+++|...
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999998874 5789999988643
No 78
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.80 E-value=1.7e-19 Score=128.13 Aligned_cols=209 Identities=16% Similarity=0.199 Sum_probs=137.4
Q ss_pred CCeeEEEee---cCCCCeEEEEcccCCCchhHHHHHHhh-hhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 020621 12 NGIWMHIAE---KGQGPLVLLIHGFPELWSCWKYQINHL-AEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLL 87 (323)
Q Consensus 12 ~g~~~~~~~---~g~~~~lv~~hG~~~~~~~~~~~~~~l-~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l 87 (323)
|..+++-.. ..+.|+++.+||..++-...-+.+..+ ..-+.+|+.+++||+|.|.+.+... -+.-|-.+++
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~-----GL~lDs~avl 137 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE-----GLKLDSEAVL 137 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc-----ceeccHHHHH
Confidence 666665322 236899999999999988777776544 3447899999999999998877322 2333444455
Q ss_pred HHh------CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchh
Q 020621 88 DEL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAE 161 (323)
Q Consensus 88 ~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (323)
+++ ...+++|.|-|+||.+|+.+|++..+++.++|+-++....+......
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~------------------------ 193 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL------------------------ 193 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe------------------------
Confidence 544 44589999999999999999999999999999998764331110000
Q ss_pred hhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhcccccc
Q 020621 162 KSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELT 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
+..+ ..+.+..+-.. .-|.+...+
T Consensus 194 --v~p~-~~k~i~~lc~k------------------------n~~~S~~ki----------------------------- 217 (300)
T KOG4391|consen 194 --VFPF-PMKYIPLLCYK------------------------NKWLSYRKI----------------------------- 217 (300)
T ss_pred --eccc-hhhHHHHHHHH------------------------hhhcchhhh-----------------------------
Confidence 0000 00000000000 000000000
Q ss_pred CccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCC--ceEEEecCCCcccchhchHHHHHHHHHHhhhcc
Q 020621 242 APWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD--LEVVVIRDAQHYIQLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 242 ~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 317 (323)
.....|.|++.|..|.++||..+ +.+-...|. .++.+||++.|.-..-. +-..++|.+||.+..
T Consensus 218 -----~~~~~P~LFiSGlkDelVPP~~M------r~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 218 -----GQCRMPFLFISGLKDELVPPVMM------RQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAEVV 283 (300)
T ss_pred -----ccccCceEEeecCccccCCcHHH------HHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHHhc
Confidence 06788999999999999999875 445555554 68999999999753322 356789999998764
No 79
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.80 E-value=3.2e-18 Score=148.86 Aligned_cols=228 Identities=23% Similarity=0.205 Sum_probs=143.9
Q ss_pred EEEE-CCeeEEEeecC---C-----CCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCCC---C---CC
Q 020621 8 RVHT-NGIWMHIAEKG---Q-----GPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSDS---P---QD 70 (323)
Q Consensus 8 ~~~~-~g~~~~~~~~g---~-----~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~---~---~~ 70 (323)
.+.. ||.+++..... . -|+||++||.+..... |....+.|+.+||.|+.++.||.+.-.. . .+
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~ 448 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGD 448 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhc
Confidence 3344 78888755432 1 2799999999865444 6677889999999999999997654211 1 11
Q ss_pred CCCCcHHHHHHHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhc
Q 020621 71 PESYTIFHLVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGE 147 (323)
Q Consensus 71 ~~~~~~~~~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 147 (323)
......+|+.+.+. ++... +.++++++|||+||.+++..+.+.| .+++.+...+..............+..
T Consensus 449 ~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~---- 522 (620)
T COG1506 449 WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRF---- 522 (620)
T ss_pred cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcC----
Confidence 23445666666666 44433 3348999999999999999999998 677777666654321100000000000
Q ss_pred ceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchh
Q 020621 148 GLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGA 227 (323)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (323)
....... .+.+ +. ..
T Consensus 523 ------------------------~~~~~~~------------------------~~~~-~~---~~------------- 537 (620)
T COG1506 523 ------------------------DPEENGG------------------------GPPE-DR---EK------------- 537 (620)
T ss_pred ------------------------CHHHhCC------------------------Cccc-Ch---HH-------------
Confidence 0000000 0000 00 00
Q ss_pred hHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch-hchHHHH
Q 020621 228 LNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL-EKAEQIT 306 (323)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~ 306 (323)
+........ .. ++++|+|+|||++|..||.+...+++ +.+.+...+++++++|+.||.+.- ++...+.
T Consensus 538 ---~~~~sp~~~--~~----~i~~P~LliHG~~D~~v~~~q~~~~~--~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~ 606 (620)
T COG1506 538 ---YEDRSPIFY--AD----NIKTPLLLIHGEEDDRVPIEQAEQLV--DALKRKGKPVELVVFPDEGHGFSRPENRVKVL 606 (620)
T ss_pred ---HHhcChhhh--hc----ccCCCEEEEeecCCccCChHHHHHHH--HHHHHcCceEEEEEeCCCCcCCCCchhHHHHH
Confidence 000000000 01 89999999999999999999877664 566667778999999999998755 5677788
Q ss_pred HHHHHHhhhcc
Q 020621 307 EEILSHFRKKS 317 (323)
Q Consensus 307 ~~i~~fl~~~~ 317 (323)
+.+.+|++++.
T Consensus 607 ~~~~~~~~~~~ 617 (620)
T COG1506 607 KEILDWFKRHL 617 (620)
T ss_pred HHHHHHHHHHh
Confidence 88888888763
No 80
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.77 E-value=3.4e-17 Score=125.87 Aligned_cols=292 Identities=20% Similarity=0.260 Sum_probs=177.5
Q ss_pred eEEEECCeeEEEeecCC-------C-CeEEEEcccCCCchhHHHHHHhhhhc---------CcEEEeeCCCCCCCCCCCC
Q 020621 7 RRVHTNGIWMHIAEKGQ-------G-PLVLLIHGFPELWSCWKYQINHLAEH---------GYHVVAPDMRGYGDSDSPQ 69 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~-------~-~~lv~~hG~~~~~~~~~~~~~~l~~~---------G~~vi~~d~~G~G~s~~~~ 69 (323)
-..++.|.+|||..... . .||+++|||+|+-..|..+++.|..- -|.||++-+||+|.|+.+.
T Consensus 127 ykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 127 YKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred hhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 34456899999886541 1 38999999999999999999888643 3899999999999999887
Q ss_pred CCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCC-------------
Q 020621 70 DPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELK------------- 136 (323)
Q Consensus 70 ~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------------- 136 (323)
. ...+....+..+..++-.+|..++.+-|-.+|+.++..+|..+|++|.|+=+-.+...+.-....
T Consensus 207 k-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~s~l~~~~~a~~~~~~~l 285 (469)
T KOG2565|consen 207 K-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPFSTLKLLYYAGFFPGQFL 285 (469)
T ss_pred c-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcHHHHHHHHHHHhcccccC
Confidence 6 78889999999999999999999999999999999999999999999887765544332111000
Q ss_pred -----------chHHHHHhhhcceee-eeccCCcchhhhcccc---cHHHHHHHHHhhcCCCCcCCCcchhhhccccCCC
Q 020621 137 -----------PTEIFFKLYGEGLYI-SQFQEPGVAEKSFSKY---DSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPS 201 (323)
Q Consensus 137 -----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (323)
..+.+...+....|. .+...|......+... ...-++.++-.+..+.....+ ...
T Consensus 286 ~sre~~d~~~p~~~~~~~lmeesgYfhiqaTkpdTiGaAl~dsPvGlAaYIleKfstwTn~~~r~l~----------dgg 355 (469)
T KOG2565|consen 286 PSREFQDFHFPVGKKFDQLMEESGYFHIQATKPDTIGAALNDSPVGLAAYILEKFSTWTNTEFRSLP----------DGG 355 (469)
T ss_pred cchhHHHhhchhHHHHHHHHHhcCceEEecCCcchhhhhhccCchHHHHHHHHHHhhccChhhhhCC----------CCc
Confidence 000011111111111 1112222111111100 011112222111111100000 000
Q ss_pred CCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhc
Q 020621 202 SLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTL 281 (323)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~ 281 (323)
.......++.+....-.+...+.....++|...-........++...+.+|+-+-.+..|..-.++ ..+...
T Consensus 356 L~krFt~D~lltnvmiYwlT~si~ss~r~y~e~~~~~~r~~~~~r~~v~vPtg~a~f~~el~~~~~--------~~lrdk 427 (469)
T KOG2565|consen 356 LNKRFTMDELLTNVMIYWLTNSITSSQRFYDESFNQRQRDLALDRVQVRVPTGCARFKFELWHTSD--------DVLRDK 427 (469)
T ss_pred hheeecHHHHhhhhhhheecCcchhhHHHHHHHHhHHHHHHHhhccccccchhhhccccchhhCcH--------HHHhhh
Confidence 011111222223333333344444444444433222111112222278889988888888765433 456777
Q ss_pred CCC-ceEEEecCCCcccchhchHHHHHHHHHHhhhcc
Q 020621 282 VPD-LEVVVIRDAQHYIQLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 282 ~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 317 (323)
.|| .+....+++||+..+|.|..+++.+..|++...
T Consensus 428 y~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~~~ 464 (469)
T KOG2565|consen 428 YPNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEKLN 464 (469)
T ss_pred cccceeeEeccCCcchhhhhCcHHHHHHHHHHHHHHH
Confidence 888 566777888999999999999999999998753
No 81
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=7.3e-18 Score=139.75 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=86.6
Q ss_pred CCeEEEEcccCCCchhH-----HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCcc
Q 020621 24 GPLVLLIHGFPELWSCW-----KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQ 94 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~-----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~ 94 (323)
.+|||++|++-.....+ ..+++.|.++||.|+++|+++-+.+. ..++++++++.+.+.++.+ |.++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57999999998666666 57899999999999999999877664 4678888888887777765 6789
Q ss_pred EEEEEechHHHHHHH----HHhhCcc-ccceeeeecccCCCC
Q 020621 95 AFVVGHDWGAQIAWN----LCLFRPD-RVKALVNLGVAYMPR 131 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~ 131 (323)
+.++|+|+||.+++. +++++++ +|++++++.++....
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999999986 7888886 899999999887654
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=1.7e-17 Score=126.10 Aligned_cols=181 Identities=21% Similarity=0.211 Sum_probs=107.3
Q ss_pred CCCeEEEEcccCCCchhHHHHHH-hhhhcCcEEEeeCCCC------CCC---CCCC-----CCC--CCCcHHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWKYQIN-HLAEHGYHVVAPDMRG------YGD---SDSP-----QDP--ESYTIFHLVGDLIG 85 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~-~l~~~G~~vi~~d~~G------~G~---s~~~-----~~~--~~~~~~~~~~~i~~ 85 (323)
..++|||+||+|.+...|..... .+......+++++-|. .|. +.-. ... ....+.+.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 56899999999999977776655 2333346777765542 232 1110 100 11233444555556
Q ss_pred HHHHh-----CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcch
Q 020621 86 LLDEL-----GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVA 160 (323)
Q Consensus 86 ~l~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (323)
+++.. ..++++|.|+|+||++|+.++.++|+.+.++|++++.........
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~------------------------- 147 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE------------------------- 147 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-------------------------
Confidence 66543 445899999999999999999999999999999997643211100
Q ss_pred hhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccc
Q 020621 161 EKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWEL 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
. ..
T Consensus 148 -------------------------------------------------~----------------------------~~ 150 (216)
T PF02230_consen 148 -------------------------------------------------D----------------------------RP 150 (216)
T ss_dssp -------------------------------------------------C----------------------------CH
T ss_pred -------------------------------------------------c----------------------------cc
Confidence 0 00
Q ss_pred cCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 241 TAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 241 ~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
. ..-..|++++||++|.++|.+..++. .+.+.+...+++++.+++.||.+.. +..+.+.+||+++
T Consensus 151 ~-----~~~~~pi~~~hG~~D~vvp~~~~~~~--~~~L~~~~~~v~~~~~~g~gH~i~~----~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 151 E-----ALAKTPILIIHGDEDPVVPFEWAEKT--AEFLKAAGANVEFHEYPGGGHEISP----EELRDLREFLEKH 215 (216)
T ss_dssp C-----CCCTS-EEEEEETT-SSSTHHHHHHH--HHHHHCTT-GEEEEEETT-SSS--H----HHHHHHHHHHHHH
T ss_pred c-----ccCCCcEEEEecCCCCcccHHHHHHH--HHHHHhcCCCEEEEEcCCCCCCCCH----HHHHHHHHHHhhh
Confidence 0 02368999999999999998765443 2555666667899999999998764 4446677777653
No 83
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=3e-17 Score=125.22 Aligned_cols=182 Identities=29% Similarity=0.340 Sum_probs=116.7
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCC-CCCCCCCCCC--------cHHHHHHHHHHHHHHh---
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGD-SDSPQDPESY--------TIFHLVGDLIGLLDEL--- 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~-s~~~~~~~~~--------~~~~~~~~i~~~l~~~--- 90 (323)
+.|.||++|++.|-....+.+++.|+++||.|+++|+-+-.. .......... ..+...+++.+.++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 568999999999877777888999999999999999864443 1111100000 1234566676666665
Q ss_pred C---CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccc
Q 020621 91 G---EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKY 167 (323)
Q Consensus 91 ~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (323)
. .+++.++|+|+||.+++.++... ..+++.+..-|....... .
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~-------~-------------------------- 138 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPP-------L-------------------------- 138 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGH-------H--------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcc-------h--------------------------
Confidence 2 35899999999999999999887 579998887761111000 0
Q ss_pred cHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCC
Q 020621 168 DSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGA 247 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
+.. .
T Consensus 139 ------------------------------------------~~~----------------------------------~ 142 (218)
T PF01738_consen 139 ------------------------------------------EDA----------------------------------P 142 (218)
T ss_dssp ------------------------------------------HHG----------------------------------G
T ss_pred ------------------------------------------hhh----------------------------------c
Confidence 000 0
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchh--------chHHHHHHHHHHhhhc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLE--------KAEQITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--------~~~~~~~~i~~fl~~~ 316 (323)
++++|+++++|++|+.++.+..+.+ .+.+.+.....++++++|++|.+... ..++-.+.+.+||+++
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~--~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEAL--EEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHH--HHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCEeecCccCCCCCChHHHHHH--HHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999998864443 24555556789999999999987543 2356667788888764
No 84
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.74 E-value=5.9e-16 Score=123.74 Aligned_cols=123 Identities=21% Similarity=0.225 Sum_probs=78.2
Q ss_pred ceeEEEECCeeEE-Eeec--C--CCCeEEEEcccCCCchhHHHH-HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHH
Q 020621 5 NHRRVHTNGIWMH-IAEK--G--QGPLVLLIHGFPELWSCWKYQ-INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFH 78 (323)
Q Consensus 5 ~~~~~~~~g~~~~-~~~~--g--~~~~lv~~hG~~~~~~~~~~~-~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~ 78 (323)
+.-.|...|.+|. |... + +.|+||++.|+.+-...+..+ .+.|..+|+.++++|.||.|.|...+- ..+.+.
T Consensus 166 ~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~~~ 243 (411)
T PF06500_consen 166 EEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDSSR 243 (411)
T ss_dssp EEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-CCH
T ss_pred EEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCHHH
Confidence 3444555666664 2222 2 336788888888877665544 567999999999999999999865432 122233
Q ss_pred HHHHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 79 LVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 79 ~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+...+.+.+... +..+|.++|.|+||++|.++|..++++++++|..+++..
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 444444444433 456999999999999999999999899999999998754
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=3.3e-16 Score=109.67 Aligned_cols=169 Identities=21% Similarity=0.309 Sum_probs=116.7
Q ss_pred CCCeEEEEcccC-----CCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC---Cc-
Q 020621 23 QGPLVLLIHGFP-----ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG---EE- 93 (323)
Q Consensus 23 ~~~~lv~~hG~~-----~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~---~~- 93 (323)
+.|..|++|.-+ .+...-..++..|.++||.++.+|+||.|.|....+ ....- .+|..+++++++ .+
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD-~GiGE---~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD-NGIGE---LEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc-CCcch---HHHHHHHHHHHHhhCCCc
Confidence 457778888533 334445677889999999999999999999998765 22222 344444555442 22
Q ss_pred c-EEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccHHHH
Q 020621 94 Q-AFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTV 172 (323)
Q Consensus 94 ~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (323)
+ ..|.|+|+|+.+++.+|.+.|+ ....+.+.|+......
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~df--------------------------------------- 142 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYDF--------------------------------------- 142 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchhh---------------------------------------
Confidence 3 3578999999999999999875 5555555554321000
Q ss_pred HHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCccccc
Q 020621 173 LKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKICVP 252 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 252 (323)
.+ .+...+|
T Consensus 143 -----------------------------------------s~------------------------------l~P~P~~ 151 (210)
T COG2945 143 -----------------------------------------SF------------------------------LAPCPSP 151 (210)
T ss_pred -----------------------------------------hh------------------------------ccCCCCC
Confidence 00 0067889
Q ss_pred eEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhh
Q 020621 253 TKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFR 314 (323)
Q Consensus 253 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (323)
.++|+|+.|.+++.....+ +.+. ...+++++++++||++ .+-..+.+.|.+||.
T Consensus 152 ~lvi~g~~Ddvv~l~~~l~------~~~~-~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 152 GLVIQGDADDVVDLVAVLK------WQES-IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ceeEecChhhhhcHHHHHH------hhcC-CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 9999999999888765322 2222 4578999999999766 455688999999995
No 86
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.73 E-value=8.2e-17 Score=129.85 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=86.0
Q ss_pred CeEEEEcccCCCchhH-HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 25 PLVLLIHGFPELWSCW-KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~-~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
|+||++..+.+..... +.+++.|.. |+.|+..|+..-+..+... ..++++|+++-+.++++++|.+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 7999999998765544 567788888 9999999998777554333 6789999999999999999877 999999999
Q ss_pred HHHHHHHHhhC-----ccccceeeeecccCCCCC
Q 020621 104 AQIAWNLCLFR-----PDRVKALVNLGVAYMPRS 132 (323)
Q Consensus 104 g~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~ 132 (323)
|..++.+++.. |++++++++++++.....
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99977666554 667999999999887643
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.73 E-value=7.6e-16 Score=123.73 Aligned_cols=102 Identities=17% Similarity=0.127 Sum_probs=72.7
Q ss_pred CCCeEEEEcccC---CCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH---HHHHHHHHhCC--c
Q 020621 23 QGPLVLLIHGFP---ELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVG---DLIGLLDELGE--E 93 (323)
Q Consensus 23 ~~~~lv~~hG~~---~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~---~i~~~l~~~~~--~ 93 (323)
+.|+||++||.+ ++...|..+++.|++. |+.|+++|+|....... ....++... .+.+..+.++. +
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~-----p~~~~D~~~a~~~l~~~~~~~~~d~~ 154 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF-----PQAIEEIVAVCCYFHQHAEDYGINMS 154 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC-----CCcHHHHHHHHHHHHHhHHHhCCChh
Confidence 458999999977 5667788888888874 89999999996543321 113333333 33333334444 5
Q ss_pred cEEEEEechHHHHHHHHHhhC------ccccceeeeecccCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFR------PDRVKALVNLGVAYM 129 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~ 129 (323)
+++++|+|+||.+|+.++.+. +.++.+++++.|...
T Consensus 155 ~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 155 RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 899999999999999988753 357899999987654
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.72 E-value=1.8e-16 Score=120.17 Aligned_cols=106 Identities=22% Similarity=0.197 Sum_probs=73.4
Q ss_pred CCCeEEEEcccCCCchhHH---HHHHhhhhcCcEEEeeCCCCCCCCCCCCC---CCC-CcHHHHHHHHHHHHHH----h-
Q 020621 23 QGPLVLLIHGFPELWSCWK---YQINHLAEHGYHVVAPDMRGYGDSDSPQD---PES-YTIFHLVGDLIGLLDE----L- 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~---~~~~~l~~~G~~vi~~d~~G~G~s~~~~~---~~~-~~~~~~~~~i~~~l~~----~- 90 (323)
+.|+||++||.+++...+. .+...+.+.||.|+++|.+|++.+....+ ... ........++..+++. .
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5689999999998877765 24445555699999999999875432110 000 0001122333333333 2
Q ss_pred -CCccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 91 -GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 91 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
+.++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 33589999999999999999999999999998888654
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.71 E-value=1.6e-16 Score=129.58 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=83.0
Q ss_pred CCCeEEEEcccCCCc--hhHHH-HHHhhhh--cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------C
Q 020621 23 QGPLVLLIHGFPELW--SCWKY-QINHLAE--HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL------G 91 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~--~~~~~-~~~~l~~--~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~------~ 91 (323)
++|++|++||++++. ..|.+ +...|.. ..++||++|++|+|.|..+. ........++++.++++.+ +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~--a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT--SAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc--ccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 478999999998754 45765 5555542 24999999999999886554 2234466677777777765 3
Q ss_pred CccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 92 EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 92 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
.++++|+||||||.+|..++.+.|++|.++++++|+..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 67999999999999999999999999999999998753
No 90
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=3.9e-15 Score=113.40 Aligned_cols=179 Identities=23% Similarity=0.300 Sum_probs=132.3
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCC-CCCCCCCCC---------CCCcHHHHHHHHHHHHHHhC---
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY-GDSDSPQDP---------ESYTIFHLVGDLIGLLDELG--- 91 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~---------~~~~~~~~~~~i~~~l~~~~--- 91 (323)
|.||++|+..+-....+..++.|+..||.|+++|+-+. |.+....+. ...+..+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999888999999999999999999999773 333222210 11334677888888888773
Q ss_pred ---CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhccccc
Q 020621 92 ---EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYD 168 (323)
Q Consensus 92 ---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (323)
.++|.++|+||||.+++.++.+.| .+++.+..-+........
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~---------------------------------- 152 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA---------------------------------- 152 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc----------------------------------
Confidence 457999999999999999999988 688888776654321110
Q ss_pred HHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCc
Q 020621 169 SLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAK 248 (323)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (323)
. . .+
T Consensus 153 ---------------------------------------~---------------------------------~----~~ 156 (236)
T COG0412 153 ---------------------------------------D---------------------------------A----PK 156 (236)
T ss_pred ---------------------------------------c---------------------------------c----cc
Confidence 0 0 08
Q ss_pred cccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchh-----------chHHHHHHHHHHhhhc
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLE-----------KAEQITEEILSHFRKK 316 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----------~~~~~~~~i~~fl~~~ 316 (323)
+.+|++++.|+.|..+|......+ ...+.....++++.+++++.|.++-+ ..+.-.+.+.+||++.
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~--~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDAL--AAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHH--HHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998865433 23333443468899999999987643 2356667777788765
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=99.67 E-value=1.8e-15 Score=111.33 Aligned_cols=175 Identities=21% Similarity=0.160 Sum_probs=117.2
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCC--CCCCCC--CCCCCCCcHH-------HHHHHHHHHHHHhC
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG--YGDSDS--PQDPESYTIF-------HLVGDLIGLLDELG 91 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G--~G~s~~--~~~~~~~~~~-------~~~~~i~~~l~~~~ 91 (323)
..|+||++||+|++...+.++...+..+ +.++.+.-+- .|.-.. -.+...++.+ .+++-+..+.++.+
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999998888866666665 6666653221 111000 0011223333 33344444444555
Q ss_pred C--ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccccH
Q 020621 92 E--EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKYDS 169 (323)
Q Consensus 92 ~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (323)
. ++++++|+|.|+++++.+..++|+.++++|+.++.........
T Consensus 96 i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~---------------------------------- 141 (207)
T COG0400 96 IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELL---------------------------------- 141 (207)
T ss_pred CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccc----------------------------------
Confidence 5 6999999999999999999999999999999998754321100
Q ss_pred HHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCCcc
Q 020621 170 LTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGAKI 249 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
. ..-
T Consensus 142 ------------~----------------------------------------------------------------~~~ 145 (207)
T COG0400 142 ------------P----------------------------------------------------------------DLA 145 (207)
T ss_pred ------------c----------------------------------------------------------------ccC
Confidence 0 045
Q ss_pred ccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhh
Q 020621 250 CVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRK 315 (323)
Q Consensus 250 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (323)
..|+++++|+.|+++|.....+. .+.+.+..-+++...++ .||.+..+.- +.+..|+.+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l--~~~l~~~g~~v~~~~~~-~GH~i~~e~~----~~~~~wl~~ 204 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEAL--AEYLTASGADVEVRWHE-GGHEIPPEEL----EAARSWLAN 204 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHH--HHHHHHcCCCEEEEEec-CCCcCCHHHH----HHHHHHHHh
Confidence 67999999999999998875544 24555556678899998 6998776554 444456654
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.67 E-value=1.3e-14 Score=111.98 Aligned_cols=100 Identities=14% Similarity=0.151 Sum_probs=84.4
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc-cEEEEEechH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE-QAFVVGHDWG 103 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~-~~~lvG~S~G 103 (323)
++|+|+|+.+++...|.++++.|...++.|+.++.+|.+.... ...+++++++...+.|.....+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999999999988458999999999983322 3569999999999988877666 9999999999
Q ss_pred HHHHHHHHhhC---ccccceeeeecccC
Q 020621 104 AQIAWNLCLFR---PDRVKALVNLGVAY 128 (323)
Q Consensus 104 g~~a~~~a~~~---p~~v~~lvl~~~~~ 128 (323)
|.+|.++|.+- ...+..+++++++.
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999763 34589999999654
No 93
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=2.3e-16 Score=123.42 Aligned_cols=115 Identities=19% Similarity=0.227 Sum_probs=83.2
Q ss_pred CeeEEEeecC-CCCeEEEEcccCCCc-hhHHHH-HHhh-hhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 13 GIWMHIAEKG-QGPLVLLIHGFPELW-SCWKYQ-INHL-AEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 13 g~~~~~~~~g-~~~~lv~~hG~~~~~-~~~~~~-~~~l-~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
+..+.+.... ++|++|++||++++. ..|... ...+ ...+++|+++|+++++.+.... ...+.....+++.++++
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHH
Confidence 3444444444 478999999999987 667554 4444 4457999999999884332211 22344555566666666
Q ss_pred Hh------CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 89 EL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 89 ~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
.+ +.++++++||||||.+|..++.++|++|.++++++|+..
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 54 446899999999999999999999999999999998753
No 94
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.67 E-value=1.7e-14 Score=114.64 Aligned_cols=106 Identities=27% Similarity=0.286 Sum_probs=69.5
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC-----------------C-CCCCcHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ-----------------D-PESYTIFHLVGDLI 84 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~-----------------~-~~~~~~~~~~~~i~ 84 (323)
+-|.||.+||.++....|.... .++..||.|+.+|.||+|...... + .+.+-+..+..|..
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ 160 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAV 160 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHH
Confidence 3479999999999977776554 366779999999999999322110 0 12233444556666
Q ss_pred HHHHHh------CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 85 GLLDEL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 85 ~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
..++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....
T Consensus 161 ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 161 RAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 666654 3458999999999999999999986 69999998886543
No 95
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.63 E-value=1.5e-15 Score=109.39 Aligned_cols=88 Identities=20% Similarity=0.289 Sum_probs=63.6
Q ss_pred EEEEcccCCC-chhHHHHH-HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHH
Q 020621 27 VLLIHGFPEL-WSCWKYQI-NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGA 104 (323)
Q Consensus 27 lv~~hG~~~~-~~~~~~~~-~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg 104 (323)
|+++||++++ ...|.+.. +.|... ++|-..|+ ..-+.+++...+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHH
Confidence 6899999987 45687665 567666 78877776 23367788888888887664 479999999999
Q ss_pred HHHHHHH-hhCccccceeeeecccC
Q 020621 105 QIAWNLC-LFRPDRVKALVNLGVAY 128 (323)
Q Consensus 105 ~~a~~~a-~~~p~~v~~lvl~~~~~ 128 (323)
..++.++ .....+|.+++|++|+.
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--S
T ss_pred HHHHHHHhhcccccccEEEEEcCCC
Confidence 9999999 66778999999999874
No 96
>PRK10115 protease 2; Provisional
Probab=99.61 E-value=6.1e-14 Score=123.15 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=88.9
Q ss_pred CCeeEEE-ee-------cCCCCeEEEEcccCCCch--hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC------CCCCCc
Q 020621 12 NGIWMHI-AE-------KGQGPLVLLIHGFPELWS--CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ------DPESYT 75 (323)
Q Consensus 12 ~g~~~~~-~~-------~g~~~~lv~~hG~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~------~~~~~~ 75 (323)
||.+|.+ .. .++.|.||++||..+... .|......|.++||.|+.++.||-|.-.... .-...+
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~ 504 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNT 504 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCc
Confidence 8998875 21 134689999999887653 4666677889999999999999976554311 112346
Q ss_pred HHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 76 IFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
++|++..+..+++.- ..+++.+.|.|.||.++..++.++|++++++|...|....
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 666666666665532 3458999999999999999999999999999999887653
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.60 E-value=5.8e-14 Score=107.79 Aligned_cols=99 Identities=18% Similarity=0.242 Sum_probs=65.6
Q ss_pred CCeEEEEcccCCC---chhHHHHHHhhhhcCcEEEeeCCC----CCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------
Q 020621 24 GPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMR----GYGDSDSPQDPESYTIFHLVGDLIGLLDEL------ 90 (323)
Q Consensus 24 ~~~lv~~hG~~~~---~~~~~~~~~~l~~~G~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~------ 90 (323)
...||||.|++.. ......+++.|.+.||.++-+-++ |+| ..++++.++||.++++++
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G---------~~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG---------TSSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS----------S--HHHHHHHHHHHHHHHHHHS--
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC---------cchhhhHHHHHHHHHHHHHHhhcc
Confidence 4589999999864 344677788898779999999876 344 337777788888887765
Q ss_pred --CCccEEEEEechHHHHHHHHHhhCc-----cccceeeeecccCCCC
Q 020621 91 --GEEQAFVVGHDWGAQIAWNLCLFRP-----DRVKALVNLGVAYMPR 131 (323)
Q Consensus 91 --~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~ 131 (323)
+.++|+|+|||.|+.-+++|+.... ..|+++||-+|.....
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 2458999999999999999997642 5799999999977543
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.60 E-value=1e-13 Score=100.88 Aligned_cols=88 Identities=28% Similarity=0.346 Sum_probs=69.2
Q ss_pred EEEEcccCCCchhHHHH--HHhhhhcC--cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEech
Q 020621 27 VLLIHGFPELWSCWKYQ--INHLAEHG--YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDW 102 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~--~~~l~~~G--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~ 102 (323)
|+++||+.+++.+.... .+.+.+.+ ..++++|++ ....+.++.+.++++....+.+.|+|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 78999999998776543 35566553 456666653 35667788889999988877899999999
Q ss_pred HHHHHHHHHhhCccccceeeeecccCCC
Q 020621 103 GAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
||..|..+|.+++ +++ |+++|+..+
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 9999999999885 455 889998765
No 99
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.60 E-value=7.1e-14 Score=112.77 Aligned_cols=298 Identities=19% Similarity=0.252 Sum_probs=169.5
Q ss_pred cceeEEEE-CCeeEEEeec----CCCCeEEEEcccCCCchhHHH------HHHhhhhcCcEEEeeCCCCCCCCCCCC---
Q 020621 4 INHRRVHT-NGIWMHIAEK----GQGPLVLLIHGFPELWSCWKY------QINHLAEHGYHVVAPDMRGYGDSDSPQ--- 69 (323)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~----g~~~~lv~~hG~~~~~~~~~~------~~~~l~~~G~~vi~~d~~G~G~s~~~~--- 69 (323)
++...|++ ||.-+..... +++|+|++.||+.+++..|.. +.-.|+++||.|+.-+.||.-.|.+..
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 56666777 8886654433 467999999999999999953 345688999999999999987775421
Q ss_pred -----CCCCCcHHHHHH-HHHHHHHH----hCCccEEEEEechHHHHHHHHHhhCcc---ccceeeeecccCCCCCCCCC
Q 020621 70 -----DPESYTIFHLVG-DLIGLLDE----LGEEQAFVVGHDWGAQIAWNLCLFRPD---RVKALVNLGVAYMPRSPELK 136 (323)
Q Consensus 70 -----~~~~~~~~~~~~-~i~~~l~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~ 136 (323)
+.-.+++++++. |+-+.+++ .+.++++.+|||.|+......++..|+ +|+..++++|+...... ..
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~-~~ 206 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHI-KS 206 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhccc-cc
Confidence 134567777544 66555554 467799999999999999999988875 79999999998865411 11
Q ss_pred chHHHHHh-------hhcceeeeeccCCcc-----hhhhcc-cccHHHHHHHHHhh-cCCCCcCCCcchhhhcccc---C
Q 020621 137 PTEIFFKL-------YGEGLYISQFQEPGV-----AEKSFS-KYDSLTVLKKLLLV-NAPDIIAAPAGVEIIDFLH---T 199 (323)
Q Consensus 137 ~~~~~~~~-------~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~ 199 (323)
....+... +...+-...+..... ...... ......+...++.. ...+. ..++... -
T Consensus 207 ~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~-------~~~n~~~~~~~ 279 (403)
T KOG2624|consen 207 LLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNS-------NNWNTTLLPVY 279 (403)
T ss_pred HHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcch-------Hhhhhcccchh
Confidence 11111111 000000000000000 000001 00111222222211 11110 0010000 1
Q ss_pred CCCCCCCCCHHHHHHHHHhhcccCcchhhHH----HHhhhccccccCccCCCccccceEEEecCCCCCCCCcCccccccc
Q 020621 200 PSSLPEWVNLEDLQSWAEKFNATGFTGALNY----YRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKG 275 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~ 275 (323)
....+...+-+.+.-+.+......+....-. ......... ......++++|+.+.+|+.|.++.++.+
T Consensus 280 ~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~p--P~Y~l~~i~~P~~l~~g~~D~l~~~~DV------ 351 (403)
T KOG2624|consen 280 LAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTP--PEYDLTNIKVPTALYYGDNDWLADPEDV------ 351 (403)
T ss_pred hccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCC--CCCCccccccCEEEEecCCcccCCHHHH------
Confidence 1123344566667777766554433321111 111111111 1122238899999999999999999875
Q ss_pred hhhhhcCCCceE---EEecCCCcccc---hhchHHHHHHHHHHhhhcc
Q 020621 276 DEFKTLVPDLEV---VVIRDAQHYIQ---LEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 276 ~~~~~~~~~~~~---~~~~~~gH~~~---~~~~~~~~~~i~~fl~~~~ 317 (323)
+.+....+++.. +.+++-.|+-+ .+.++++.+.|.+.++...
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 352 LILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 334444455333 22788899754 3578999999998887543
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.60 E-value=1.1e-14 Score=126.27 Aligned_cols=109 Identities=20% Similarity=0.210 Sum_probs=88.0
Q ss_pred ceeEEEECCeeEEEeecCCC-----------CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCC-----
Q 020621 5 NHRRVHTNGIWMHIAEKGQG-----------PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSP----- 68 (323)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~~-----------~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~----- 68 (323)
..++...++.++.|...+.+ |+||++||++++...|..+++.|.++||+|+++|+||||.|...
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 34555668888777765432 48999999999999999999999988999999999999999443
Q ss_pred ----C-CCC-----------CCcHHHHHHHHHHHHHHhC----------------CccEEEEEechHHHHHHHHHhh
Q 020621 69 ----Q-DPE-----------SYTIFHLVGDLIGLLDELG----------------EEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 69 ----~-~~~-----------~~~~~~~~~~i~~~l~~~~----------------~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
. ... ..++++.+.|+..+...++ ..+++++||||||.++..++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 000 1378999999998888776 2489999999999999999975
No 101
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.58 E-value=1.3e-14 Score=114.39 Aligned_cols=103 Identities=15% Similarity=0.128 Sum_probs=81.8
Q ss_pred CCeEEEEcccCCCchhH-----HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHH-HH----HHHHHHHhCCc
Q 020621 24 GPLVLLIHGFPELWSCW-----KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLV-GD----LIGLLDELGEE 93 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~-----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~-~~----i~~~l~~~~~~ 93 (323)
++|++++|.+-.....| ..++..|.++|+.|+.+++++-..+.. ..++++++ +. +..+.+..+.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~-----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA-----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh-----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 46899999988776665 467888999999999999998777654 34566655 44 44445555788
Q ss_pred cEEEEEechHHHHHHHHHhhCccc-cceeeeecccCCCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPDR-VKALVNLGVAYMPR 131 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~ 131 (323)
++.++|+|.||+++..+++.++.+ |++++++.++....
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999999988887 99999998876543
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.57 E-value=5.3e-13 Score=97.38 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=76.0
Q ss_pred eEEEE-CCeeEEEeecC-------CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCC-CCCCCCCCCCCCcHH
Q 020621 7 RRVHT-NGIWMHIAEKG-------QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY-GDSDSPQDPESYTIF 77 (323)
Q Consensus 7 ~~~~~-~g~~~~~~~~g-------~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~~~~~~~ 77 (323)
+.+.+ +|.+|++.+.. ..++||+.+|++...+.+..++..|+..||+|+.+|--.| |.|++.. ..+++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchH
Confidence 45566 78888876543 2479999999999999999999999999999999999877 8898876 688998
Q ss_pred HHHHHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 78 HLVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 78 ~~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
...+++..+++++ |..++.|+.-|+.|.+|+..|.+- .+.-+|...+..
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 8888888888776 677899999999999999999954 366666665443
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.57 E-value=1.8e-14 Score=89.18 Aligned_cols=75 Identities=28% Similarity=0.391 Sum_probs=64.7
Q ss_pred CeeEEEeecC---C-CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 13 GIWMHIAEKG---Q-GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 13 g~~~~~~~~g---~-~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
|.+|+++.+. + +.+|+++||++.++..|..+++.|+++||.|+++|+||||.|..... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 5678888775 2 45899999999999999999999999999999999999999986442 45689999999998874
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=7.9e-14 Score=100.68 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=80.2
Q ss_pred CCeeEEEeecC---CCC-eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC-CCCCcHHHHHH-HHHH
Q 020621 12 NGIWMHIAEKG---QGP-LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD-PESYTIFHLVG-DLIG 85 (323)
Q Consensus 12 ~g~~~~~~~~g---~~~-~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~-~i~~ 85 (323)
||..+....+. +.+ .++.-.+.+.....|++++..++++||.|.++|+||.|.|..... ...+.+.|++. |+.+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 78877655554 333 455555666677788999999999999999999999999987652 23567777654 6666
Q ss_pred HHHHh----CCccEEEEEechHHHHHHHHHhhCccccceeeeecc
Q 020621 86 LLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126 (323)
Q Consensus 86 ~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 126 (323)
.++.+ ...+.+.||||+||.+.-.+.. ++ ++.+....++
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~ 136 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGS 136 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEecc
Confidence 66655 4458999999999987665554 33 4555444443
No 105
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.55 E-value=2.1e-14 Score=124.12 Aligned_cols=115 Identities=20% Similarity=0.241 Sum_probs=89.9
Q ss_pred CCeeEEEeec-----CCCCeEEEEcccCCCch---hH-HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 020621 12 NGIWMHIAEK-----GQGPLVLLIHGFPELWS---CW-KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD 82 (323)
Q Consensus 12 ~g~~~~~~~~-----g~~~~lv~~hG~~~~~~---~~-~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (323)
||.+|++... ++.|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|..... ..+ .+.++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccchH
Confidence 7888874332 24689999999997653 22 234567888899999999999999987542 233 567788
Q ss_pred HHHHHHHhCC-----ccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 83 LIGLLDELGE-----EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 83 i~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+.++++++.. .++.++|+|+||.+++.+|..+|++++++|..++...
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 8888887733 4899999999999999999999999999999887654
No 106
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.55 E-value=1.7e-13 Score=103.31 Aligned_cols=105 Identities=31% Similarity=0.475 Sum_probs=76.0
Q ss_pred CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-h------CCcc
Q 020621 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE-L------GEEQ 94 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-~------~~~~ 94 (323)
|.-|++||+||+......|..++++++++||-|+.+|+...+...... +.....+.++.+.+=++. + +..+
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccccc
Confidence 456999999999988888999999999999999999976644321111 122222333332221111 1 3458
Q ss_pred EEEEEechHHHHHHHHHhhC-----ccccceeeeecccC
Q 020621 95 AFVVGHDWGAQIAWNLCLFR-----PDRVKALVNLGVAY 128 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 128 (323)
+.|.|||.||-+|..++..+ +.+++++++++|.-
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999999887 55899999999875
No 107
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=2.3e-13 Score=100.75 Aligned_cols=107 Identities=28% Similarity=0.407 Sum_probs=77.3
Q ss_pred CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCC----CCC---------------CCCCcHHHHHHH
Q 020621 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDS----PQD---------------PESYTIFHLVGD 82 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~----~~~---------------~~~~~~~~~~~~ 82 (323)
+.-|.||-.||++++...|..... ++..||.|+.+|.||.|.|.. ++. ...+-+.....|
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred CccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 356899999999999988866654 344589999999999999843 111 112222333344
Q ss_pred HHHHHH------HhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 83 LIGLLD------ELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 83 i~~~l~------~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+..+++ ..+.+++.+.|.|.||.+++.+++..| +++++++.-|....
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d 212 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD 212 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc
Confidence 444443 335679999999999999999999887 79999988776543
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.54 E-value=5.3e-13 Score=103.93 Aligned_cols=107 Identities=23% Similarity=0.328 Sum_probs=90.6
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhc---CcEEEeeCCCCCCCCCCCC----CCCCCcHHHHHHHHHHHHHHhC-----
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEH---GYHVVAPDMRGYGDSDSPQ----DPESYTIFHLVGDLIGLLDELG----- 91 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~---G~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~~~i~~~l~~~~----- 91 (323)
.+.++|++|.+|-.+.|..+++.|.+. .+.|+++.+.||-.++... +...++.+++++--.++++..-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999998887643 6999999999998876651 3468899999998888887653
Q ss_pred -CccEEEEEechHHHHHHHHHhhCc---cccceeeeecccCCC
Q 020621 92 -EEQAFVVGHDWGAQIAWNLCLFRP---DRVKALVNLGVAYMP 130 (323)
Q Consensus 92 -~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 130 (323)
..+++|+|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 247999999999999999999999 689999999987643
No 109
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.53 E-value=1.5e-12 Score=88.51 Aligned_cols=106 Identities=19% Similarity=0.204 Sum_probs=78.5
Q ss_pred eEEEEcccCCCc--hhHHHHHHhhhhcCcEEEeeCCCCCCCCC----CCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEE
Q 020621 26 LVLLIHGFPELW--SCWKYQINHLAEHGYHVVAPDMRGYGDSD----SPQDPESYTIFHLVGDLIGLLDELGEEQAFVVG 99 (323)
Q Consensus 26 ~lv~~hG~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~----~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG 99 (323)
+||+-||.+.+. ......+..|+.+|+.|..++++..-... +++.....-..++...+.++...+...++++-|
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GG 95 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGG 95 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeecc
Confidence 788889998764 45677789999999999999998643221 122212333445677777777777777999999
Q ss_pred echHHHHHHHHHhhCccccceeeeecccCCCC
Q 020621 100 HDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131 (323)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 131 (323)
+||||.++.+++..--..|+++++++-++.+.
T Consensus 96 kSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 96 KSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred ccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 99999999998876545599999998665543
No 110
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.49 E-value=4.4e-12 Score=106.28 Aligned_cols=124 Identities=17% Similarity=0.132 Sum_probs=86.4
Q ss_pred eeEEEEC----CeeEEEeecC------CCCeEEEEcccCCCchhHHHHHH-----------h-------hhhcCcEEEee
Q 020621 6 HRRVHTN----GIWMHIAEKG------QGPLVLLIHGFPELWSCWKYQIN-----------H-------LAEHGYHVVAP 57 (323)
Q Consensus 6 ~~~~~~~----g~~~~~~~~g------~~~~lv~~hG~~~~~~~~~~~~~-----------~-------l~~~G~~vi~~ 57 (323)
+.+++++ +..++|.-.. +.|.+|+++|.+|++..+.-+.+ . +.+. ..++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEE
Confidence 4567774 3556654332 46899999999998877633321 1 2233 689999
Q ss_pred CCC-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-------CCccEEEEEechHHHHHHHHHhhC----------ccccc
Q 020621 58 DMR-GYGDSDSPQDPESYTIFHLVGDLIGLLDEL-------GEEQAFVVGHDWGAQIAWNLCLFR----------PDRVK 119 (323)
Q Consensus 58 d~~-G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~ 119 (323)
|.| |+|.|.........+.++.++|+.++++.. +..+++|+|||+||..+..+|.+. +-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 975 999987644223456678889988888743 457899999999999998887652 11478
Q ss_pred eeeeecccCCC
Q 020621 120 ALVNLGVAYMP 130 (323)
Q Consensus 120 ~lvl~~~~~~~ 130 (323)
++++-++...+
T Consensus 208 Gi~IGNg~~dp 218 (462)
T PTZ00472 208 GLAVGNGLTDP 218 (462)
T ss_pred EEEEeccccCh
Confidence 88888876654
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.48 E-value=5.8e-13 Score=101.34 Aligned_cols=95 Identities=22% Similarity=0.172 Sum_probs=63.4
Q ss_pred EEEEcccCC---CchhHHHHHHhhhh-cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---------CCc
Q 020621 27 VLLIHGFPE---LWSCWKYQINHLAE-HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL---------GEE 93 (323)
Q Consensus 27 lv~~hG~~~---~~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~---------~~~ 93 (323)
||++||.+. +......++..+++ .|+.|+++|+|=.. ..++.+.++|+.+.++++ +.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p---------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP---------EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT---------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc---------cccccccccccccceeeecccccccccccc
Confidence 789999874 34445566666665 79999999998321 223445555555544433 445
Q ss_pred cEEEEEechHHHHHHHHHhhCcc----ccceeeeecccCCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPD----RVKALVNLGVAYMP 130 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 130 (323)
+++|+|+|.||.+|+.++.+..+ .++++++++|....
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 89999999999999999976443 48999999996543
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.47 E-value=4.8e-12 Score=121.31 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=88.3
Q ss_pred cCCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-ccEEEEE
Q 020621 21 KGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE-EQAFVVG 99 (323)
Q Consensus 21 ~g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG 99 (323)
.+++++++++||++++...|..+.+.|... ++|+.+|.+|+|.+.. ..++++++++++.+.++.+.. .+++++|
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G 1139 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLG 1139 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 355689999999999999999999999875 9999999999986532 457999999999999988654 4899999
Q ss_pred echHHHHHHHHHhh---Cccccceeeeeccc
Q 020621 100 HDWGAQIAWNLCLF---RPDRVKALVNLGVA 127 (323)
Q Consensus 100 ~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 127 (323)
||+||.+|.++|.+ .++++..++++++.
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999986 46789999998864
No 113
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.47 E-value=9.2e-13 Score=97.28 Aligned_cols=107 Identities=24% Similarity=0.350 Sum_probs=75.9
Q ss_pred CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-------CCcc
Q 020621 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL-------GEEQ 94 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-------~~~~ 94 (323)
|.-|.|+|+||+......|..+..+++.+||-|+++++-..- ......+-.+....++++..-+.++ ++.+
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~k 121 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSK 121 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccce
Confidence 345899999999999999999999999999999999996431 1111001112222233333333322 3458
Q ss_pred EEEEEechHHHHHHHHHhhCcc--ccceeeeecccCCC
Q 020621 95 AFVVGHDWGAQIAWNLCLFRPD--RVKALVNLGVAYMP 130 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 130 (323)
+.++|||.||..|..+|..+.. .+.++|.++|....
T Consensus 122 lal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 122 LALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred EEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 9999999999999999987742 58899999987654
No 114
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.43 E-value=2e-12 Score=93.28 Aligned_cols=194 Identities=19% Similarity=0.244 Sum_probs=125.9
Q ss_pred eEEEECCeeEEEeecCCCC-eEEEEcccCCCch-hHHHHHHhhhhcCcEEEeeCCCCC-CCCCCCCC------CCCCcHH
Q 020621 7 RRVHTNGIWMHIAEKGQGP-LVLLIHGFPELWS-CWKYQINHLAEHGYHVVAPDMRGY-GDSDSPQD------PESYTIF 77 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~~-~lv~~hG~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~------~~~~~~~ 77 (323)
+..++.|..-++....+.+ .||++--..|... .-+..+..++.+||.|+++|+-.= -.|..... ....+.+
T Consensus 21 ~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~ 100 (242)
T KOG3043|consen 21 REEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPP 100 (242)
T ss_pred ceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcc
Confidence 3445566665554444444 6666666555444 467788899999999999998521 11111000 1223444
Q ss_pred HHHHHHHHHHHHh---C-CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeee
Q 020621 78 HLVGDLIGLLDEL---G-EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQ 153 (323)
Q Consensus 78 ~~~~~i~~~l~~~---~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (323)
-...++..+++.+ + .++|-++|+||||.++..+....| .+.+.+.+-|....
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------- 156 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------- 156 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------
Confidence 4555566665554 4 568999999999999999888887 67777766554321
Q ss_pred ccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHh
Q 020621 154 FQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRA 233 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
.++..
T Consensus 157 -------------------------------------------------------~~D~~-------------------- 161 (242)
T KOG3043|consen 157 -------------------------------------------------------SADIA-------------------- 161 (242)
T ss_pred -------------------------------------------------------hhHHh--------------------
Confidence 11111
Q ss_pred hhccccccCccCCCccccceEEEecCCCCCCCCcCccccccchhhhhcCCC--ceEEEecCCCcccch-----hc-----
Q 020621 234 MDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD--LEVVVIRDAQHYIQL-----EK----- 301 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-----~~----- 301 (323)
.+.+||+++.|+.|.++|++....+ ++..+..+. .++++++|.+|-++. +.
T Consensus 162 --------------~vk~Pilfl~ae~D~~~p~~~v~~~---ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~ 224 (242)
T KOG3043|consen 162 --------------NVKAPILFLFAELDEDVPPKDVKAW---EEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKK 224 (242)
T ss_pred --------------cCCCCEEEEeecccccCCHHHHHHH---HHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHH
Confidence 7899999999999999999876554 222233333 479999999997763 22
Q ss_pred -hHHHHHHHHHHhhhc
Q 020621 302 -AEQITEEILSHFRKK 316 (323)
Q Consensus 302 -~~~~~~~i~~fl~~~ 316 (323)
-|+..+.+..|++..
T Consensus 225 ~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 225 AAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 366667777777654
No 115
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.43 E-value=7.1e-12 Score=87.17 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=67.1
Q ss_pred CCeEEEEcccCCCc-hhHHHHHH-hhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 24 GPLVLLIHGFPELW-SCWKYQIN-HLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 24 ~~~lv~~hG~~~~~-~~~~~~~~-~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
.+.+|++||+.+|. ..|....+ .|.. +-.+++. +...-..+++++.+.+.+... .++++||+||
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHS 67 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHS 67 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEec
Confidence 35789999998864 46765543 2322 2222221 113457788888888888777 4679999999
Q ss_pred hHHHHHHHHHhhCccccceeeeecccCC
Q 020621 102 WGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+|+..++.++.+....|+|+++++|+-.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 9999999999987778999999998753
No 116
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.41 E-value=1e-13 Score=109.23 Aligned_cols=106 Identities=23% Similarity=0.248 Sum_probs=75.4
Q ss_pred CCCeEEEEcccCCCc-hhHHHHH---------HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 23 QGPLVLLIHGFPELW-SCWKYQI---------NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~-~~~~~~~---------~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
+-|+||..++++.+. ....... ..++++||.|++.|.||.|.|....... ..+.++|..++|+.+..
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~ 95 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAA 95 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHH
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHh
Confidence 347899999999654 2222211 1288999999999999999998876322 55567777777776622
Q ss_pred -----ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCC
Q 020621 93 -----EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131 (323)
Q Consensus 93 -----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 131 (323)
.+|.++|.|++|..++.+|...|..+++++...+.....
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred CCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 389999999999999999998888999999988766543
No 117
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.40 E-value=6.4e-12 Score=96.01 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=72.1
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhh-hcCc--EE--EeeCCCCC----CCCC---CCC------CCCC-CcHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLA-EHGY--HV--VAPDMRGY----GDSD---SPQ------DPES-YTIFHLVGDL 83 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~-~~G~--~v--i~~d~~G~----G~s~---~~~------~~~~-~~~~~~~~~i 83 (323)
+..|.||+||++++...+..++..+. +.|. .+ +.++--|. |.=. ..+ +... -++...+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34689999999999999999999997 5543 23 33343332 2211 111 1122 4678888888
Q ss_pred HHHHHHh----CCccEEEEEechHHHHHHHHHhhCcc-----ccceeeeecccCCC
Q 020621 84 IGLLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPD-----RVKALVNLGVAYMP 130 (323)
Q Consensus 84 ~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~ 130 (323)
..++..| +.+++.+|||||||..++.++..+.. .+..+|.+++++..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 8888877 67799999999999999999887532 58999999988754
No 118
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.40 E-value=9.3e-11 Score=93.02 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=83.4
Q ss_pred CCeeEEEeecC------CCCeEEEEcccCC-----CchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 020621 12 NGIWMHIAEKG------QGPLVLLIHGFPE-----LWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHL 79 (323)
Q Consensus 12 ~g~~~~~~~~g------~~~~lv~~hG~~~-----~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 79 (323)
++..++.+... ..|.||++||+|. +...|..++..+++. +.-|+++|+|=- +.......++|.
T Consensus 72 ~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA-----PEh~~Pa~y~D~ 146 (336)
T KOG1515|consen 72 TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA-----PEHPFPAAYDDG 146 (336)
T ss_pred CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC-----CCCCCCccchHH
Confidence 55555544432 2479999999873 245677888877544 788999999822 222245577777
Q ss_pred HHHHHHHHHH------hCCccEEEEEechHHHHHHHHHhhC------ccccceeeeecccCCCCC
Q 020621 80 VGDLIGLLDE------LGEEQAFVVGHDWGAQIAWNLCLFR------PDRVKALVNLGVAYMPRS 132 (323)
Q Consensus 80 ~~~i~~~l~~------~~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~ 132 (323)
.+.+..+.++ .+.+++.|+|-|.||.+|..+|.+. +.++++.|++-|......
T Consensus 147 ~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 147 WAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 7777777774 2566899999999999999888763 357999999999876543
No 119
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.39 E-value=1.3e-11 Score=109.51 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=67.3
Q ss_pred HHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--------------------CccEEEEEech
Q 020621 43 QINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG--------------------EEQAFVVGHDW 102 (323)
Q Consensus 43 ~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~--------------------~~~~~lvG~S~ 102 (323)
+.+.|..+||.|+..|.||+|.|++... ... .+..+|..++|+++. ..+|.++|.|+
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 4577889999999999999999988652 222 445667777777764 35999999999
Q ss_pred HHHHHHHHHhhCccccceeeeecccC
Q 020621 103 GAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
||.+++.+|...|..++++|..++..
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 99999999999888999999877653
No 120
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.39 E-value=2.6e-12 Score=104.78 Aligned_cols=107 Identities=23% Similarity=0.304 Sum_probs=61.0
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCC-CCCC-C--CC-------------C-----CCCC------
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY-GDSD-S--PQ-------------D-----PESY------ 74 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~-~--~~-------------~-----~~~~------ 74 (323)
+-|+|||-||++++...|..++..|+.+||-|+++|+|.. +... . .. + ....
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 3489999999999999999999999999999999999942 2100 0 00 0 0000
Q ss_pred -----cHHHHHHHHHHHHHHh--------------------------CCccEEEEEechHHHHHHHHHhhCccccceeee
Q 020621 75 -----TIFHLVGDLIGLLDEL--------------------------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVN 123 (323)
Q Consensus 75 -----~~~~~~~~i~~~l~~~--------------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl 123 (323)
.++.-+.++..+++.+ +.+++.++|||+||..++..+... .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 0011122333333222 234799999999999999988877 57999999
Q ss_pred ecccCCC
Q 020621 124 LGVAYMP 130 (323)
Q Consensus 124 ~~~~~~~ 130 (323)
+++...+
T Consensus 258 LD~W~~P 264 (379)
T PF03403_consen 258 LDPWMFP 264 (379)
T ss_dssp ES---TT
T ss_pred eCCcccC
Confidence 9987654
No 121
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.38 E-value=9.9e-11 Score=91.62 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=72.0
Q ss_pred CCCeEEEEcccCCCchhHH-HH-HHhhhhcCcEEEeeCCCCCCCCCCCCC--CCCCcHHHH-------HHH---HHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWK-YQ-INHLAEHGYHVVAPDMRGYGDSDSPQD--PESYTIFHL-------VGD---LIGLLD 88 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~-~~-~~~l~~~G~~vi~~d~~G~G~s~~~~~--~~~~~~~~~-------~~~---i~~~l~ 88 (323)
.+|.+|.++|.|......+ .+ +..|.++|+..+.+..|-||...+... ..-.+..|+ +.+ +..+++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 4678888899888654433 33 567777799999999999998755431 011122222 222 233444
Q ss_pred HhCCccEEEEEechHHHHHHHHHhhCccccceeeeeccc
Q 020621 89 ELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127 (323)
Q Consensus 89 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 127 (323)
..|..++.+.|.||||.+|...|+..|..+..+-.+++.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 447789999999999999999999999876666555543
No 122
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.6e-10 Score=88.12 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=86.5
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-ccEEEEEechH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE-EQAFVVGHDWG 103 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG~S~G 103 (323)
|+|.++|+.+|....|.++...|... ..|+.++.||.|.-.. ..-+++++++...+.|..... .+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 68999999999999999999999998 9999999999986322 356899999999988887754 49999999999
Q ss_pred HHHHHHHHhhC---ccccceeeeecccCC
Q 020621 104 AQIAWNLCLFR---PDRVKALVNLGVAYM 129 (323)
Q Consensus 104 g~~a~~~a~~~---p~~v~~lvl~~~~~~ 129 (323)
|.+|..+|.+- .+.|..++++++...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999763 347999999998765
No 123
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.36 E-value=6.8e-11 Score=84.38 Aligned_cols=98 Identities=23% Similarity=0.219 Sum_probs=75.7
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCccEEEEEe
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQAFVVGH 100 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~~~lvG~ 100 (323)
..+||+-|=++-...=..+++.|+++|+.|+.+|-+-+=.+ ..+.++.+.|+.+++++. +.++++|+|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS-------ERTPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh-------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 35778888777665556778999999999999997654444 235667777777777654 6779999999
Q ss_pred chHHHHHHHHHhhCc----cccceeeeecccCC
Q 020621 101 DWGAQIAWNLCLFRP----DRVKALVNLGVAYM 129 (323)
Q Consensus 101 S~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~ 129 (323)
|+|+-+.-....+.| ++|..++|+++...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999988887777766 47999999987643
No 124
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.36 E-value=8.9e-12 Score=94.39 Aligned_cols=103 Identities=19% Similarity=0.237 Sum_probs=72.0
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhh--------cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH----HHHHHHHHh
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAE--------HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVG----DLIGLLDEL 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~--------~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~----~i~~~l~~~ 90 (323)
++.+||||||.+++...++.+...+.+ ..++++++|+......-. ...+.+..+ .+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 578999999999999988888766521 148899999876432221 122333333 333344433
Q ss_pred -----CCccEEEEEechHHHHHHHHHhhCc---cccceeeeecccCCC
Q 020621 91 -----GEEQAFVVGHDWGAQIAWNLCLFRP---DRVKALVNLGVAYMP 130 (323)
Q Consensus 91 -----~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 130 (323)
+.++++||||||||.+|..++...+ +.|+.+|.+++|...
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999988886643 479999999987643
No 125
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=4.9e-11 Score=105.53 Aligned_cols=224 Identities=16% Similarity=0.174 Sum_probs=142.4
Q ss_pred cceeEEEECCeeEEEeecC--------CCCeEEEEcccCCCch-------hHHHHHHhhhhcCcEEEeeCCCCCCCCCCC
Q 020621 4 INHRRVHTNGIWMHIAEKG--------QGPLVLLIHGFPELWS-------CWKYQINHLAEHGYHVVAPDMRGYGDSDSP 68 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g--------~~~~lv~~hG~~~~~~-------~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~ 68 (323)
++-..+..+|....+...- +-|.+|.+||.+++.. .|.. ......|+.|+.+|.||.|.....
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~--~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNE--VVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHH--HhhccCCeEEEEEcCCCcCCcchh
Confidence 4456666789988876543 2378888899987322 2332 245667999999999998877543
Q ss_pred C------CCCCCcHHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCcc-ccceeeeecccCCCCCCCCCchH
Q 020621 69 Q------DPESYTIFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPD-RVKALVNLGVAYMPRSPELKPTE 139 (323)
Q Consensus 69 ~------~~~~~~~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~ 139 (323)
. +-......|+...+..+++.. +.+++.++|+|+||.+++..+...|+ .+++.+.++|...-.-......+
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~te 655 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTE 655 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccH
Confidence 2 223456777777777777754 55689999999999999999999985 45555888887643211000000
Q ss_pred HHHHhhhcceeeeeccCCcchhhhcccccHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhh
Q 020621 140 IFFKLYGEGLYISQFQEPGVAEKSFSKYDSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKF 219 (323)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (323)
+. +.. ..+....|.+..
T Consensus 656 ry-----------------------------------mg~----------------------------p~~~~~~y~e~~ 672 (755)
T KOG2100|consen 656 RY-----------------------------------MGL----------------------------PSENDKGYEESS 672 (755)
T ss_pred hh-----------------------------------cCC----------------------------Cccccchhhhcc
Confidence 00 000 000000011110
Q ss_pred cccCcchhhHHHHhhhccccccCccCCCccccce-EEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccc
Q 020621 220 NATGFTGALNYYRAMDKNWELTAPWQGAKICVPT-KFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQ 298 (323)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 298 (323)
.... . ..++.|. |++||+.|.-++.+....++ +.+....-..+..++|+.+|.+.
T Consensus 673 ~~~~----------------~------~~~~~~~~LliHGt~DdnVh~q~s~~~~--~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 673 VSSP----------------A------NNIKTPKLLLIHGTEDDNVHFQQSAILI--KALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred ccch----------------h------hhhccCCEEEEEcCCcCCcCHHHHHHHH--HHHHHCCCceEEEEeCCCCcccc
Confidence 0000 0 0455555 99999999999887654442 44555544489999999999886
Q ss_pred hhc-hHHHHHHHHHHhhhc
Q 020621 299 LEK-AEQITEEILSHFRKK 316 (323)
Q Consensus 299 ~~~-~~~~~~~i~~fl~~~ 316 (323)
.-. -..+...+..|+..+
T Consensus 729 ~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred cccchHHHHHHHHHHHHHH
Confidence 643 367788888998854
No 126
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.33 E-value=4.8e-12 Score=95.53 Aligned_cols=105 Identities=21% Similarity=0.160 Sum_probs=53.9
Q ss_pred CCCeEEEEcccCCCchhHHHHHHh----hhhcCcEEEeeCCCCCC-----CCCC------------C------CC---CC
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINH----LAEHGYHVVAPDMRGYG-----DSDS------------P------QD---PE 72 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~----l~~~G~~vi~~d~~G~G-----~s~~------------~------~~---~~ 72 (323)
.++-||++||++.|+..++..... |.+.++..+.+|-|--- -... + .. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 357899999999999999776544 44425888888876321 1100 0 00 01
Q ss_pred CCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCc--------cccceeeeecccC
Q 020621 73 SYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP--------DRVKALVNLGVAY 128 (323)
Q Consensus 73 ~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--------~~v~~lvl~~~~~ 128 (323)
...+++..+.+.++++..+. =..++|+|.||.+|..++.... ..++-+|++++..
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 23455666666667766552 2468999999999998885421 2467788887654
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.33 E-value=9.6e-12 Score=97.51 Aligned_cols=93 Identities=30% Similarity=0.408 Sum_probs=67.7
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCC--CCCCCCCCC----CCCcHHHHHHHHHHHHHHh-------
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGY--GDSDSPQDP----ESYTIFHLVGDLIGLLDEL------- 90 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~--G~s~~~~~~----~~~~~~~~~~~i~~~l~~~------- 90 (323)
-|.||+-||.|+....+..+.+.|++.||-|..+|.||. |........ ...-+.+...|+..+|+.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 488999999999999999999999999999999999983 444322211 1112234444555544433
Q ss_pred ------CCccEEEEEechHHHHHHHHHhhCcc
Q 020621 91 ------GEEQAFVVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 91 ------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 116 (323)
+..+|.++|||+||..+++.+.-+.+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 33489999999999999999876543
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.5e-10 Score=83.83 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=46.9
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
.+++|.|.|.|+.|.++|... ++.+.+..++..+..-+| ||+++-.. ...+.|.+|+...
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~------s~~L~~~~~~a~vl~Hpg-gH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSER------SEQLAESFKDATVLEHPG-GHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCCCeeEEecccceeecchH------HHHHHHhcCCCeEEecCC-CccCCCch--HHHHHHHHHHHHH
Confidence 799999999999999999876 477889999997777766 99987654 3445555555543
No 129
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.30 E-value=2.9e-10 Score=83.46 Aligned_cols=125 Identities=18% Similarity=0.241 Sum_probs=92.4
Q ss_pred cceeEEEECCeeEEEeecC--------CCCeEEEEcccCCCchhHHHHHHhhhhc---CcEEEeeCCCCCCCCCC---CC
Q 020621 4 INHRRVHTNGIWMHIAEKG--------QGPLVLLIHGFPELWSCWKYQINHLAEH---GYHVVAPDMRGYGDSDS---PQ 69 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g--------~~~~lv~~hG~~~~~~~~~~~~~~l~~~---G~~vi~~d~~G~G~s~~---~~ 69 (323)
|+.++++.+|..++....+ +.+.+++++|.+|....|..+...|... .+.++++-..||-.-+. ..
T Consensus 1 m~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~ 80 (301)
T KOG3975|consen 1 MTEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED 80 (301)
T ss_pred CcceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc
Confidence 4567888888877766554 3578999999999999999988776543 26699998888865441 11
Q ss_pred ----CCCCCcHHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCc--cccceeeeecccC
Q 020621 70 ----DPESYTIFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRP--DRVKALVNLGVAY 128 (323)
Q Consensus 70 ----~~~~~~~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 128 (323)
..+-++.+++++-=.++++.. ...+++++|||-|+++.+....... -.|++.+++=|..
T Consensus 81 ~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 81 HSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred cccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 124568888888888888765 3348999999999999998886432 2577888776654
No 130
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.29 E-value=2.4e-11 Score=100.38 Aligned_cols=123 Identities=14% Similarity=0.188 Sum_probs=85.3
Q ss_pred eeEEEE-CCeeEEEee--cCCCCeEEEEccc---CCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 020621 6 HRRVHT-NGIWMHIAE--KGQGPLVLLIHGF---PELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHL 79 (323)
Q Consensus 6 ~~~~~~-~g~~~~~~~--~g~~~~lv~~hG~---~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 79 (323)
.++... +|..+.+.. .|....-.+-+.. ......|..+++.|.+.||.+ ..|++|+|.+.+.........+++
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~L 148 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGL 148 (440)
T ss_pred CceecCCCCceEEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHH
Confidence 344555 588877764 3322111112221 345678999999999999755 889999999976542112234445
Q ss_pred HHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc----ccceeeeecccCC
Q 020621 80 VGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD----RVKALVNLGVAYM 129 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~ 129 (323)
.+.+.++.+..+.++++|+||||||.++..++..+|+ .|+++|+++++..
T Consensus 149 k~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 149 KKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 5555555556677899999999999999999998886 4789999987754
No 131
>PRK04940 hypothetical protein; Provisional
Probab=99.28 E-value=4.4e-10 Score=80.18 Aligned_cols=86 Identities=15% Similarity=0.250 Sum_probs=54.4
Q ss_pred EEEEcccCCCchh--HHHHH-HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC----CccEEEEE
Q 020621 27 VLLIHGFPELWSC--WKYQI-NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG----EEQAFVVG 99 (323)
Q Consensus 27 lv~~hG~~~~~~~--~~~~~-~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~----~~~~~lvG 99 (323)
|+++||+.+++.+ ..... ..+ .-+.+++ +++ .....+.++.+.+.+..+. .+++.|||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS------------TLHPKHDMQHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 7899999998877 43211 112 1113332 221 1344444555555554321 25799999
Q ss_pred echHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 100 HDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
.|+||+.|..++.++. + ..|+++|+..+
T Consensus 67 SSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 67 VGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred eChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 9999999999999985 4 56779998766
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.27 E-value=5.5e-10 Score=90.16 Aligned_cols=103 Identities=22% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCCeEEEEcccCC---CchhHHHH-HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hC--Cc
Q 020621 23 QGPLVLLIHGFPE---LWSCWKYQ-INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE---LG--EE 93 (323)
Q Consensus 23 ~~~~lv~~hG~~~---~~~~~~~~-~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~---~~--~~ 93 (323)
+.|+||++||.+. +....... ...+...|+.|+++|+|-.-.-. ....+++..+.+..+.++ ++ .+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 3689999999873 44444344 45556679999999998332221 233444444444444433 22 56
Q ss_pred cEEEEEechHHHHHHHHHhhCcc----ccceeeeecccCCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPD----RVKALVNLGVAYMP 130 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 130 (323)
+++++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 89999999999999999876543 46888888887654
No 133
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.24 E-value=4.9e-10 Score=83.76 Aligned_cols=107 Identities=19% Similarity=0.224 Sum_probs=69.5
Q ss_pred CCCeEEEEcccCCCchhHHHH--HHhhhhc-CcEEEeeCCCCCCCCCC------CCCC-CCCcHHHHHHHHHHHHHHh--
Q 020621 23 QGPLVLLIHGFPELWSCWKYQ--INHLAEH-GYHVVAPDMRGYGDSDS------PQDP-ESYTIFHLVGDLIGLLDEL-- 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~--~~~l~~~-G~~vi~~d~~G~G~s~~------~~~~-~~~~~~~~~~~i~~~l~~~-- 90 (323)
+.|.||++||.+++...+... ...|+++ ||-|+.++......... .... ..-....+...+.++..+.
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 348999999999998877553 2445544 89999888642211110 0000 0111122223333344443
Q ss_pred CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+.++|++.|+|.||+++..++..+|+.+.++...++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 445899999999999999999999999999888876543
No 134
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.22 E-value=2.4e-10 Score=82.19 Aligned_cols=103 Identities=16% Similarity=0.260 Sum_probs=72.5
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCC--------CC------CCC--CCCCcHHHHHHHHHHHHH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS--------DS------PQD--PESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s--------~~------~~~--~~~~~~~~~~~~i~~~l~ 88 (323)
.+||++||.+.+...|..+++.|.......|++.-|-.-.+ .. ..+ ....++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999999888877766677777754421111 00 000 023355566667777776
Q ss_pred Hh---C--CccEEEEEechHHHHHHHHHhhCccccceeeeeccc
Q 020621 89 EL---G--EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127 (323)
Q Consensus 89 ~~---~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 127 (323)
+. + ..++.+-|.|+||.++++.+..+|..+.+++...+.
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 54 2 347889999999999999999998878887766654
No 135
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.22 E-value=2.7e-09 Score=81.21 Aligned_cols=95 Identities=18% Similarity=0.090 Sum_probs=71.5
Q ss_pred EEcccC--CCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-hCCccEEEEEechHHH
Q 020621 29 LIHGFP--ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE-LGEEQAFVVGHDWGAQ 105 (323)
Q Consensus 29 ~~hG~~--~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-~~~~~~~lvG~S~Gg~ 105 (323)
++|+.+ ++...|..+...|... +.|+.+|.+|++.+.... .+.+++++.+...+.. ....+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 455544 6777899999999875 999999999998765433 3667777766555443 3456899999999999
Q ss_pred HHHHHHhh---CccccceeeeecccC
Q 020621 106 IAWNLCLF---RPDRVKALVNLGVAY 128 (323)
Q Consensus 106 ~a~~~a~~---~p~~v~~lvl~~~~~ 128 (323)
++...+.+ .++.+.+++++++..
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99988876 345688998887643
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.21 E-value=1.8e-11 Score=92.19 Aligned_cols=51 Identities=20% Similarity=0.267 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHh---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 79 LVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 79 ~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+.+...+++... ..++|.|+|.|.||-+|+.+|+.+| .|+++|+++|....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 344444555443 3358999999999999999999998 79999999987654
No 137
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.20 E-value=1.4e-08 Score=78.91 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=76.5
Q ss_pred cceeEEEECCeeEEEeec-----CCCCeEEEEcccCCCchhHH------HHHHhh-hhcCcEEEeeCCCCCCCCCCCCCC
Q 020621 4 INHRRVHTNGIWMHIAEK-----GQGPLVLLIHGFPELWSCWK------YQINHL-AEHGYHVVAPDMRGYGDSDSPQDP 71 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~-----g~~~~lv~~hG~~~~~~~~~------~~~~~l-~~~G~~vi~~d~~G~G~s~~~~~~ 71 (323)
+++-.++.|+..|.-... .++..+|++-|.++.-+... ..+..+ .+.|.+|+++++||.|.|.+..
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 445566668777653332 25679999999887655511 223333 3347899999999999997655
Q ss_pred CCCcHHHHHHHHHHHHHHhC-------CccEEEEEechHHHHHHHHHhhCc
Q 020621 72 ESYTIFHLVGDLIGLLDELG-------EEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 72 ~~~~~~~~~~~i~~~l~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+.++++.|-.+.++.+. .+++++.|||+||.++..++.++.
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 56888888877777662 357999999999999998777653
No 138
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.19 E-value=9.8e-10 Score=89.57 Aligned_cols=236 Identities=14% Similarity=0.061 Sum_probs=124.6
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-----CCccEEEEEechHHHHHHHHHhhCccccc
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL-----GEEQAFVVGHDWGAQIAWNLCLFRPDRVK 119 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~ 119 (323)
..|. .|+.|+.+.+. +.+. ...++.+......++++.+ +..+.+|+|-|.||..++.+|+.+|+.+.
T Consensus 95 ~AL~-~GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~g 166 (581)
T PF11339_consen 95 VALR-AGHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVG 166 (581)
T ss_pred HHHH-cCCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccC
Confidence 3444 48999988764 2222 4568888877777777765 23489999999999999999999999888
Q ss_pred eeeeecccCCCCCC--CCCchHHHHHhhhcceeeeecc-------CCcchhhhcccccHHH-HHHHHHhhcCCCCcCCCc
Q 020621 120 ALVNLGVAYMPRSP--ELKPTEIFFKLYGEGLYISQFQ-------EPGVAEKSFSKYDSLT-VLKKLLLVNAPDIIAAPA 189 (323)
Q Consensus 120 ~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 189 (323)
-+|+.+++...... ...+........+..|+..... ........|+.+.... .+.+.+.....-......
T Consensus 167 plvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~e~~R 246 (581)
T PF11339_consen 167 PLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDTERER 246 (581)
T ss_pred ceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCCchhh
Confidence 88887776654331 2233333333333333222111 1112233344444443 344444432222111222
Q ss_pred chhhhccccCCCCCCCCCCHHHHHHHHHhh-cccCcchhhHHHHhhhccccccCccCCCccccceEEEecCCCCCCCCcC
Q 020621 190 GVEIIDFLHTPSSLPEWVNLEDLQSWAEKF-NATGFTGALNYYRAMDKNWELTAPWQGAKICVPTKFIIGDKHMGFKSFG 268 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~~~~~~ 268 (323)
...+.+++.. ...++.+.+....+.+ ......... .........++++|+||+.++.|..|.++||+.
T Consensus 247 fl~FErWwgg----~~~l~~~ei~~Iv~nLFvgNrL~~g~-------~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~Q 315 (581)
T PF11339_consen 247 FLEFERWWGG----FYDLNGEEILWIVENLFVGNRLAKGE-------FRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQ 315 (581)
T ss_pred hhHHHHHhCC----ccCCCHHHHHHHHHHHhccchhccCc-------eeccCCcEeehhhCCCCEEEEeccCCCCCChhH
Confidence 2223333322 2223444444443322 111111100 000011122334999999999999999999987
Q ss_pred cccccc-----chhhhhcCCCceEEEecCCCcccch
Q 020621 269 TENYIK-----GDEFKTLVPDLEVVVIRDAQHYIQL 299 (323)
Q Consensus 269 ~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~ 299 (323)
.-.|+- .+.+.......-+.+-+..||...+
T Consensus 316 aL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIF 351 (581)
T PF11339_consen 316 ALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIF 351 (581)
T ss_pred hccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEE
Confidence 644431 1222222222334444778998643
No 139
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.19 E-value=2.5e-10 Score=81.26 Aligned_cols=106 Identities=19% Similarity=0.149 Sum_probs=69.3
Q ss_pred EEeecC---CCCeEEEEcccC---CCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-
Q 020621 17 HIAEKG---QGPLVLLIHGFP---ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE- 89 (323)
Q Consensus 17 ~~~~~g---~~~~lv~~hG~~---~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~- 89 (323)
.+..+| +.+.+||+||.- ++...-...+..+.++||+|.++++ +.+. ...+.++.+.++...++.
T Consensus 57 ~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~-----q~htL~qt~~~~~~gv~fi 128 (270)
T KOG4627|consen 57 LVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCP-----QVHTLEQTMTQFTHGVNFI 128 (270)
T ss_pred EEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCc-----ccccHHHHHHHHHHHHHHH
Confidence 344555 468999999963 2222222334556677999999865 3443 344666666666555543
Q ss_pred ---h-CCccEEEEEechHHHHHHHHHhh-CccccceeeeecccCCC
Q 020621 90 ---L-GEEQAFVVGHDWGAQIAWNLCLF-RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 90 ---~-~~~~~~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~ 130 (323)
. ..+.+.+-|||.|+.+|+.+..+ +..+|.+++++++.+..
T Consensus 129 lk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l 174 (270)
T KOG4627|consen 129 LKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL 174 (270)
T ss_pred HHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH
Confidence 3 33456666999999999887765 33489999999987653
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.17 E-value=1.5e-10 Score=91.37 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=48.3
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcC-CCceEEEecCCCcccch-hchHHHHHHHHHHhhhc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLV-PDLEVVVIRDAQHYIQL-EKAEQITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 316 (323)
..+.|+++.+|..|.++|+....++. +.+.+.. .+++++.+++.+|.... .......+.|.+-|+..
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~--~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALV--AKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHH--HHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCC
Confidence 56899999999999999998876663 5556666 68899999999998643 33334445555555443
No 141
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.15 E-value=1e-10 Score=87.25 Aligned_cols=89 Identities=26% Similarity=0.243 Sum_probs=55.0
Q ss_pred CeEEEEcccCC-CchhHHHHHHhhhhcCcE---EEeeCCCCCCCCCCCCC--CCCCcHHHHHHHHHHHHHHhCCccEEEE
Q 020621 25 PLVLLIHGFPE-LWSCWKYQINHLAEHGYH---VVAPDMRGYGDSDSPQD--PESYTIFHLVGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 25 ~~lv~~hG~~~-~~~~~~~~~~~l~~~G~~---vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~i~~~l~~~~~~~~~lv 98 (323)
.||||+||.++ ....|..+.+.|.++||. ++++++-....+..... ....+..++.+-|.+++++.+. ++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999999 678899999999999999 79999844333221110 0011223455555556666688 99999
Q ss_pred EechHHHHHHHHHhhC
Q 020621 99 GHDWGAQIAWNLCLFR 114 (323)
Q Consensus 99 G~S~Gg~~a~~~a~~~ 114 (323)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999999888643
No 142
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.11 E-value=7.1e-09 Score=87.46 Aligned_cols=125 Identities=16% Similarity=0.175 Sum_probs=83.8
Q ss_pred ceeEEEEC---CeeEEEeecC------CCCeEEEEcccCCCchhHHHHHHh-------------------hhhcCcEEEe
Q 020621 5 NHRRVHTN---GIWMHIAEKG------QGPLVLLIHGFPELWSCWKYQINH-------------------LAEHGYHVVA 56 (323)
Q Consensus 5 ~~~~~~~~---g~~~~~~~~g------~~~~lv~~hG~~~~~~~~~~~~~~-------------------l~~~G~~vi~ 56 (323)
.+.+++++ +..++|.-.. +.|.+|++.|.+|++..+..+.+. +.+. .+++-
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~ 90 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLF 90 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEE
Confidence 35667775 6677765432 468999999999999988554211 1222 68999
Q ss_pred eCCC-CCCCCCCCCCC-CCCcHHHHHHHHHHHHHHh-------CCccEEEEEechHHHHHHHHHhh----C------ccc
Q 020621 57 PDMR-GYGDSDSPQDP-ESYTIFHLVGDLIGLLDEL-------GEEQAFVVGHDWGAQIAWNLCLF----R------PDR 117 (323)
Q Consensus 57 ~d~~-G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~------p~~ 117 (323)
+|.| |.|.|...... ...+.++.++++.++|... ...+++|.|.|+||..+-.+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9966 99999765532 2457888888988888765 44589999999999987776653 2 235
Q ss_pred cceeeeecccCCC
Q 020621 118 VKALVNLGVAYMP 130 (323)
Q Consensus 118 v~~lvl~~~~~~~ 130 (323)
++++++.++...+
T Consensus 171 LkGi~IGng~~dp 183 (415)
T PF00450_consen 171 LKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEESE-SBH
T ss_pred cccceecCccccc
Confidence 8899988877654
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.1e-09 Score=90.94 Aligned_cols=208 Identities=15% Similarity=0.088 Sum_probs=131.9
Q ss_pred CCeEEEEcccCCC-----chhHHHH--HHhhhhcCcEEEeeCCCCCCCCCCCC------CCCCCcHHHHHHHHHHHHHHh
Q 020621 24 GPLVLLIHGFPEL-----WSCWKYQ--INHLAEHGYHVVAPDMRGYGDSDSPQ------DPESYTIFHLVGDLIGLLDEL 90 (323)
Q Consensus 24 ~~~lv~~hG~~~~-----~~~~~~~--~~~l~~~G~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~i~~~l~~~ 90 (323)
-|+++++=|.++- ...|... ...|+..||.|+++|-||........ ......++|+++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4899999998853 2223333 35688899999999999976554322 335678899999999888877
Q ss_pred ---CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCCCCCCchHHHHHhhhcceeeeeccCCcchhhhcccc
Q 020621 91 ---GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRSPELKPTEIFFKLYGEGLYISQFQEPGVAEKSFSKY 167 (323)
Q Consensus 91 ---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (323)
+.+++.+-|||+||+++++...++|+-.+..|.-+|.. .... .+.+..++.+...
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT-~W~~---------------------YDTgYTERYMg~P 779 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT-DWRL---------------------YDTGYTERYMGYP 779 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce-eeee---------------------ecccchhhhcCCC
Confidence 45699999999999999999999998666555444332 1110 0000011110000
Q ss_pred cHHHHHHHHHhhcCCCCcCCCcchhhhccccCCCCCCCCCCHHHHHHHHHhhcccCcchhhHHHHhhhccccccCccCCC
Q 020621 168 DSLTVLKKLLLVNAPDIIAAPAGVEIIDFLHTPSSLPEWVNLEDLQSWAEKFNATGFTGALNYYRAMDKNWELTAPWQGA 247 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
. . .........+..+.. .+.
T Consensus 780 ~-------------~--------------------nE~gY~agSV~~~Ve---------------klp------------ 799 (867)
T KOG2281|consen 780 D-------------N--------------------NEHGYGAGSVAGHVE---------------KLP------------ 799 (867)
T ss_pred c-------------c--------------------chhcccchhHHHHHh---------------hCC------------
Confidence 0 0 000000011111111 110
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCccc-chhchHHHHHHHHHHhhh
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYI-QLEKAEQITEEILSHFRK 315 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~ 315 (323)
.-+-..|++||--|.-|.......++ ..+.++.+.-++.+||+--|.+ -.|...-.-..+..|+++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lv--s~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLV--SALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHH--HHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 33446899999999988877654443 4556666677999999999988 445666667778888875
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.96 E-value=8.4e-10 Score=88.32 Aligned_cols=106 Identities=23% Similarity=0.304 Sum_probs=63.8
Q ss_pred CCCeEEEEcccCCCc--hhHHH-HHHhh-hh--cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------
Q 020621 23 QGPLVLLIHGFPELW--SCWKY-QINHL-AE--HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL------ 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~--~~~~~-~~~~l-~~--~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~------ 90 (323)
+.|++|++|||.++. ..|.. +...+ .. ..++||++|+...-...-.. .........+.+..+|..|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 468999999999877 45644 44544 43 47999999995322110000 0112233344444444433
Q ss_pred CCccEEEEEechHHHHHHHHHhhCcc--ccceeeeecccCCC
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALVNLGVAYMP 130 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 130 (323)
..++++|||||+||.+|-.++..... +|..++.++|+...
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 45689999999999999999988776 89999999988654
No 145
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.94 E-value=7.5e-08 Score=71.35 Aligned_cols=105 Identities=18% Similarity=0.117 Sum_probs=75.2
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcC-----cEEEeeCCCCC----CCCCCCC---------CCCCCcHHHHHHHHHHH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHG-----YHVVAPDMRGY----GDSDSPQ---------DPESYTIFHLVGDLIGL 86 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G-----~~vi~~d~~G~----G~s~~~~---------~~~~~~~~~~~~~i~~~ 86 (323)
-|.||+||.+|+..+....+..|...+ --++.+|--|- |.=++.. .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 389999999999999999998887763 13555666551 1111110 01344566677777777
Q ss_pred HHHh----CCccEEEEEechHHHHHHHHHhhCcc-----ccceeeeecccCC
Q 020621 87 LDEL----GEEQAFVVGHDWGAQIAWNLCLFRPD-----RVKALVNLGVAYM 129 (323)
Q Consensus 87 l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 129 (323)
+..| +..++.+|||||||.-...++..+.. .++.+|.+++++.
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7766 67799999999999999988876532 4899999998776
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.93 E-value=6.8e-09 Score=79.07 Aligned_cols=106 Identities=19% Similarity=0.297 Sum_probs=72.2
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCC------CCCC----------------CC-----CCcH
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD------SPQD----------------PE-----SYTI 76 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~------~~~~----------------~~-----~~~~ 76 (323)
-|.+||-||++++...|..++-.|+.+||-|.+++.|-+-.+. .+.. .. ....
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 4899999999999999999999999999999999998543331 0000 00 0011
Q ss_pred HHHHHHHHH---HHHHh------------------------CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 77 FHLVGDLIG---LLDEL------------------------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 77 ~~~~~~i~~---~l~~~------------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
..-+..+.. +++.+ .-.++.++|||+||..++...+.+. .++..|+++....
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeec
Confidence 111222222 22222 1127889999999999998887764 6888888887765
Q ss_pred C
Q 020621 130 P 130 (323)
Q Consensus 130 ~ 130 (323)
+
T Consensus 277 P 277 (399)
T KOG3847|consen 277 P 277 (399)
T ss_pred c
Confidence 5
No 147
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.92 E-value=7e-09 Score=82.37 Aligned_cols=104 Identities=31% Similarity=0.401 Sum_probs=61.8
Q ss_pred CCCeEEEEcccCCCchhH------------------HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCC---CCCcHHHH--
Q 020621 23 QGPLVLLIHGFPELWSCW------------------KYQINHLAEHGYHVVAPDMRGYGDSDSPQDP---ESYTIFHL-- 79 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~------------------~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~---~~~~~~~~-- 79 (323)
+-|.||++||-++..+.. ......|+++||-|+++|.+|+|+....... ..++.+.+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 447999999987665331 1245679999999999999999997654311 11121212
Q ss_pred -------------HHHHHHHHHHh------CCccEEEEEechHHHHHHHHHhhCccccceeeeeccc
Q 020621 80 -------------VGDLIGLLDEL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVA 127 (323)
Q Consensus 80 -------------~~~i~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 127 (323)
+-|...+++.+ +.++|.++|+||||..++.+++.. ++|++.|..+-.
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 11223344444 345899999999999999999987 489888877643
No 148
>PLN02606 palmitoyl-protein thioesterase
Probab=98.85 E-value=1e-06 Score=68.27 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=68.0
Q ss_pred CCCeEEEEcccC--CCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--CccEEE
Q 020621 23 QGPLVLLIHGFP--ELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG--EEQAFV 97 (323)
Q Consensus 23 ~~~~lv~~hG~~--~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~l 97 (323)
+..|||+.||+| .+...+..+.+.+.+. |+.+.++. .|-+. .. ..-.+..++++.+.+.+.... .+-+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~-s~~~~~~~Qv~~vce~l~~~~~L~~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QD-SLFMPLRQQASIACEKIKQMKELSEGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---cc-ccccCHHHHHHHHHHHHhcchhhcCceEE
Confidence 346899999999 4555677777777522 56555554 22221 11 122355666666665555421 135899
Q ss_pred EEechHHHHHHHHHhhCcc--ccceeeeecccC
Q 020621 98 VGHDWGAQIAWNLCLFRPD--RVKALVNLGVAY 128 (323)
Q Consensus 98 vG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 128 (323)
+|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999876 599999999764
No 149
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.84 E-value=4.2e-07 Score=66.02 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=77.0
Q ss_pred CCCeEEEEcccCCCc---hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc----cE
Q 020621 23 QGPLVLLIHGFPELW---SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE----QA 95 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~---~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~----~~ 95 (323)
...-|||+-|++..- ..-.++...|.+.+|.++-+.++.+-. .....++.+.++|++.+++|++.. .+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~-----G~Gt~slk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN-----GYGTFSLKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc-----ccccccccccHHHHHHHHHHhhccCcccce
Confidence 345789999988653 334677788888899999998863211 113457778899999999988543 79
Q ss_pred EEEEechHHHHHHHHHhh--CccccceeeeecccCCC
Q 020621 96 FVVGHDWGAQIAWNLCLF--RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~ 130 (323)
+|+|||.|+.=.+.+... .|..+++.|+.+|....
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 999999999988887732 45678888888887643
No 150
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.81 E-value=1.8e-08 Score=81.41 Aligned_cols=100 Identities=20% Similarity=0.214 Sum_probs=81.6
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcE---EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYH---VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
-++|++||++.+...|..+...+...|+. ++.+++++. +...+ ....-+.+...+.+++...+.+++.|+|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~--~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYS--LAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc--CCCcc--ccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 38999999988888998888777777777 888888866 11111 345666777778888888888999999999
Q ss_pred hHHHHHHHHHhhCc--cccceeeeecccC
Q 020621 102 WGAQIAWNLCLFRP--DRVKALVNLGVAY 128 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 128 (323)
|||..+..++...+ .+|+.++.++++-
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999999988 7999999999764
No 151
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.78 E-value=8.9e-08 Score=73.16 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=67.9
Q ss_pred CCCeEEEEcccCCCchhHHHHH----HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCcc
Q 020621 23 QGPLVLLIHGFPELWSCWKYQI----NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQ 94 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~----~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~ 94 (323)
++..+|||||+..+.+.-..-+ ..+.-.| .++.+.+|..|.-..-.. ...+.......+.++|..+ +.++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 5679999999998855432222 2222222 799999998876322111 1223334455555555554 5679
Q ss_pred EEEEEechHHHHHHHHHhh----Cc-----cccceeeeecccCC
Q 020621 95 AFVVGHDWGAQIAWNLCLF----RP-----DRVKALVNLGVAYM 129 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~----~p-----~~v~~lvl~~~~~~ 129 (323)
|+|++||||+.+.+.+... .+ .++..+|+.+|-..
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999887654 11 36788898887553
No 152
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.77 E-value=6.7e-08 Score=73.30 Aligned_cols=102 Identities=23% Similarity=0.270 Sum_probs=61.0
Q ss_pred CeEEEEcccCCCchhHH-HHHHh-------hhhcCcEEEeeCCC-CCCCCCCCCCCCCCcHHHHHHHHHHHH-HHh--CC
Q 020621 25 PLVLLIHGFPELWSCWK-YQINH-------LAEHGYHVVAPDMR-GYGDSDSPQDPESYTIFHLVGDLIGLL-DEL--GE 92 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~-~~~~~-------l~~~G~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~i~~~l-~~~--~~ 92 (323)
|.+||+||.|..+..-. .+.+. .-+.++-|+++.+- =+..++.. ...-....++.+.+++ ++- +.
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~~~l~~~idli~~vlas~ynID~ 268 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TLLYLIEKIDLILEVLASTYNIDR 268 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cchhHHHHHHHHHHHHhhccCccc
Confidence 89999999997654432 22211 11223444554421 11112111 1112233334444233 333 34
Q ss_pred ccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 93 EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 93 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
.+|+++|.|+||+-++.++.++|+.+.+.+++++...
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 5899999999999999999999999999999987643
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.77 E-value=1.3e-06 Score=69.72 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=68.9
Q ss_pred CeEEEEcccCCCch---hHHHHHHhhhhcCcEEEeeCCCCC--CCCCC----------CC----CCCC-----------C
Q 020621 25 PLVLLIHGFPELWS---CWKYQINHLAEHGYHVVAPDMRGY--GDSDS----------PQ----DPES-----------Y 74 (323)
Q Consensus 25 ~~lv~~hG~~~~~~---~~~~~~~~l~~~G~~vi~~d~~G~--G~s~~----------~~----~~~~-----------~ 74 (323)
-.||++||.+.+.+ ...++-..|.+.|+..+++.+|.- ..+.. .. .... .
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 48999999998764 345666788899999999999871 11100 00 0000 0
Q ss_pred cH----HHHHHHHH---HHHHHhCCccEEEEEechHHHHHHHHHhhCcc-ccceeeeecccC
Q 020621 75 TI----FHLVGDLI---GLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD-RVKALVNLGVAY 128 (323)
Q Consensus 75 ~~----~~~~~~i~---~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 128 (323)
.. ..+..-+. +++...+..+++|+||+.|+.+++.+....+. .++++|++++..
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 01 12222233 33334465679999999999999999988764 589999999754
No 154
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.72 E-value=1.4e-07 Score=78.37 Aligned_cols=97 Identities=21% Similarity=0.225 Sum_probs=61.2
Q ss_pred CCeEEEEcccC--CCchh----HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--------
Q 020621 24 GPLVLLIHGFP--ELWSC----WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE-------- 89 (323)
Q Consensus 24 ~~~lv~~hG~~--~~~~~----~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~-------- 89 (323)
.|.++++||.+ ..... |........+. -.+-++|++.-- ...++...++.+..+.+.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 57889999988 12222 33333333333 567777776321 224555666666665552
Q ss_pred hCCccEEEEEechHHHHHHHHHhhCcc-ccceeeeecccCC
Q 020621 90 LGEEQAFVVGHDWGAQIAWNLCLFRPD-RVKALVNLGVAYM 129 (323)
Q Consensus 90 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 129 (323)
+...+|+|+|.|||+.++.+.+...-+ .|+++|.++-+..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 244589999999998888877765542 4889998875543
No 155
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.72 E-value=4.5e-07 Score=70.29 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=53.7
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch-hchHHHHHHHHHHh
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL-EKAEQITEEILSHF 313 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 313 (323)
...+|-+++.++.|.+++.+.+++.. +...+..-+++...++++.|..++ .+|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~--~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHA--EEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHH--HHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 56799999999999999999887763 444555556899999999999876 58999999999885
No 156
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.70 E-value=7.3e-07 Score=66.60 Aligned_cols=59 Identities=14% Similarity=0.148 Sum_probs=50.1
Q ss_pred ceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCccc-chhchHHHHHHHHHHhhhcc
Q 020621 252 PTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYI-QLEKAEQITEEILSHFRKKS 317 (323)
Q Consensus 252 Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~ 317 (323)
-+.++.+++|..+|... ...+.+..|++++..+++ ||.. ++-+.+.+.+.|.+-|++.+
T Consensus 308 l~ivv~A~~D~Yipr~g------v~~lQ~~WPg~eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 308 LIIVVQAKEDAYIPRTG------VRSLQEIWPGCEVRYLEG-GHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred eEEEEEecCCccccccC------cHHHHHhCCCCEEEEeec-CceeeeehhchHHHHHHHHHHHhhh
Confidence 46788999999999876 467888999999999984 9974 67788899999999998765
No 157
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.69 E-value=3.7e-07 Score=69.60 Aligned_cols=122 Identities=25% Similarity=0.300 Sum_probs=82.1
Q ss_pred eEEEECCeeEEEeec---C---CCCeEEEEcccCCCchhHHHHH--Hhhhhc-CcEEEeeCCC-------CCCCCCCCCC
Q 020621 7 RRVHTNGIWMHIAEK---G---QGPLVLLIHGFPELWSCWKYQI--NHLAEH-GYHVVAPDMR-------GYGDSDSPQD 70 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~---g---~~~~lv~~hG~~~~~~~~~~~~--~~l~~~-G~~vi~~d~~-------G~G~s~~~~~ 70 (323)
..+..+|.+..|.-. + ..|.||++||..++...+.... +.|+++ ||-|+.+|-- +++.+..+.+
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 345556666665543 2 2468999999999988776664 666654 8999998532 2233322221
Q ss_pred --CCCCcHHHHHHHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 71 --PESYTIFHLVGDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 71 --~~~~~~~~~~~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
........+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 01223333444444555555666 89999999999999999999999999988887654
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.68 E-value=1e-06 Score=61.11 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=66.1
Q ss_pred EEEEcccCCCchhHHHHH--HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHH
Q 020621 27 VLLIHGFPELWSCWKYQI--NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGA 104 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~--~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg 104 (323)
||.+||+.+|..+..... +.+.+. . |-.+.|.+. ....+...++.+..++...+.+.+.|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~-------~~i~y~~p~---l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-V-------RDIEYSTPH---LPHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-c-------cceeeecCC---CCCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 799999999888776543 334433 2 222223222 245788899999999999998889999999999
Q ss_pred HHHHHHHhhCccccceeeeecccCCC
Q 020621 105 QIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 105 ~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+.|.+++.++. +++++ ++|+..+
T Consensus 71 Y~At~l~~~~G--irav~-~NPav~P 93 (191)
T COG3150 71 YYATWLGFLCG--IRAVV-FNPAVRP 93 (191)
T ss_pred HHHHHHHHHhC--Chhhh-cCCCcCc
Confidence 99999999885 55554 7777655
No 159
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.67 E-value=7.1e-08 Score=73.13 Aligned_cols=85 Identities=20% Similarity=0.242 Sum_probs=50.4
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhc--CcEEEeeCCCCCCCCCCCCCCCCCcHH----HHHHHHHHHHHHhCC--ccEE
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEH--GYHVVAPDMRGYGDSDSPQDPESYTIF----HLVGDLIGLLDELGE--EQAF 96 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~~~i~~~l~~~~~--~~~~ 96 (323)
-.|||+||+.++...|..+...+... .+.--.+...+....... ...+++ .++++|.+.++.... .+++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 47999999999999998877666551 121112222222111111 122333 444555555544444 3899
Q ss_pred EEEechHHHHHHHHHh
Q 020621 97 VVGHDWGAQIAWNLCL 112 (323)
Q Consensus 97 lvG~S~Gg~~a~~~a~ 112 (323)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876654
No 160
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.67 E-value=7.7e-07 Score=73.92 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=64.1
Q ss_pred CCeEEEEcccCCCch-hHHHHHHhhhhcC----cEEEeeCCCCCC-CCCCCCCCCCCcHHHHHHHHHHHHHHh-----CC
Q 020621 24 GPLVLLIHGFPELWS-CWKYQINHLAEHG----YHVVAPDMRGYG-DSDSPQDPESYTIFHLVGDLIGLLDEL-----GE 92 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~-~~~~~~~~l~~~G----~~vi~~d~~G~G-~s~~~~~~~~~~~~~~~~~i~~~l~~~-----~~ 92 (323)
.|+|+++||...... .....+..|.+.| .-++.+|..+.. .+...+. ...-.+.+++++.-.++.. +.
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 488999999542211 1123344555554 345677753211 1111110 1112233456666666643 33
Q ss_pred ccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 93 EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 93 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 478899999999999999999999999999999764
No 161
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.66 E-value=2.4e-07 Score=77.86 Aligned_cols=118 Identities=20% Similarity=0.204 Sum_probs=80.6
Q ss_pred CCeeEEEeec-----CCCCeEEEEcccCCCch---hH--HHHHH---hhhhcCcEEEeeCCCCCCCCCCCCCCCCCc-HH
Q 020621 12 NGIWMHIAEK-----GQGPLVLLIHGFPELWS---CW--KYQIN---HLAEHGYHVVAPDMRGYGDSDSPQDPESYT-IF 77 (323)
Q Consensus 12 ~g~~~~~~~~-----g~~~~lv~~hG~~~~~~---~~--~~~~~---~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~-~~ 77 (323)
||.+|+...+ |+.|+++..+-++-... .+ ....+ .++.+||.|+..|.||.|.|.+..+. .++ -.
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~~~E~ 106 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ESSREA 106 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-eccccc
Confidence 9999875433 35688888882222222 11 12223 58888999999999999999887642 222 12
Q ss_pred HHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 78 HLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 78 ~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+...|+.+.+... -..++..+|.|++|...+.+|+..|..+++++..++....
T Consensus 107 ~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 107 EDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 2233444444433 2348999999999999999999998889999988876553
No 162
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.63 E-value=1.4e-06 Score=64.50 Aligned_cols=84 Identities=20% Similarity=0.208 Sum_probs=56.0
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcE-EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEech
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYH-VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDW 102 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~ 102 (323)
...|||..|+|++...+..+.. .+ ++. ++++|+|..- ++. + ..+.+++.|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~~-~~D~l~~yDYr~l~------------~d~---~------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--PE-NYDVLICYDYRDLD------------FDF---D------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--CC-CccEEEEecCcccc------------ccc---c------cccCceEEEEEEeH
Confidence 4689999999999888776531 22 344 5567876211 110 1 12457999999999
Q ss_pred HHHHHHHHHhhCccccceeeeecccCCCCCC
Q 020621 103 GAQIAWNLCLFRPDRVKALVNLGVAYMPRSP 133 (323)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 133 (323)
|=.+|..+....| ++.-|.+++...+...
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~Pid~ 95 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPYPIDD 95 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCCCcCC
Confidence 9999888766554 6777778776655443
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.62 E-value=5e-07 Score=76.51 Aligned_cols=107 Identities=23% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCeEEEEcccCCCchhH--HHHHHhhhhc-CcEEEeeCCCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHHHhC----
Q 020621 24 GPLVLLIHGFPELWSCW--KYQINHLAEH-GYHVVAPDMRGYGDSDSPQ-----DPESYTIFHLVGDLIGLLDELG---- 91 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~--~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~i~~~l~~~~---- 91 (323)
+|.+|++.|-+.-...| ..+...|+++ |--++++++|-+|.|.+.. ...-.+.++..+|+..+++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 56666665544322222 2344556554 7789999999999997643 2345688999999999998763
Q ss_pred ---CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 92 ---EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 92 ---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
..|++++|-|+||++|..+-.++|+.|.+.+..+++...
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 238999999999999999999999999999998877654
No 164
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.60 E-value=1.6e-07 Score=72.76 Aligned_cols=98 Identities=21% Similarity=0.242 Sum_probs=69.1
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH-HHHHhCC--ccEEEEEec
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIG-LLDELGE--EQAFVVGHD 101 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~-~l~~~~~--~~~~lvG~S 101 (323)
..||++-|..+-.+. .....=.+.||.|+-+++||++.|.+.+ ...+-...++.+.+ .|..++. +.|+|.|||
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P--~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLP--YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCC--CcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 356666676554321 1222334458999999999999998877 33344444444444 4556655 479999999
Q ss_pred hHHHHHHHHHhhCccccceeeeeccc
Q 020621 102 WGAQIAWNLCLFRPDRVKALVNLGVA 127 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lvl~~~~ 127 (323)
.||.-++.+|..+|+ |+++|+-++.
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999996 9999987654
No 165
>PLN02209 serine carboxypeptidase
Probab=98.60 E-value=1.2e-05 Score=67.37 Aligned_cols=124 Identities=16% Similarity=0.095 Sum_probs=77.6
Q ss_pred eeEEEEC---CeeEEEeecC------CCCeEEEEcccCCCchhHHHHHH----------------hh-------hhcCcE
Q 020621 6 HRRVHTN---GIWMHIAEKG------QGPLVLLIHGFPELWSCWKYQIN----------------HL-------AEHGYH 53 (323)
Q Consensus 6 ~~~~~~~---g~~~~~~~~g------~~~~lv~~hG~~~~~~~~~~~~~----------------~l-------~~~G~~ 53 (323)
+.+++++ +..++|.-.. +.|.++++.|.+|++..+..+.+ .| .+. .+
T Consensus 41 sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-an 119 (437)
T PLN02209 41 TGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-AN 119 (437)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-Cc
Confidence 4566663 4556554322 36899999999998877643321 11 122 57
Q ss_pred EEeeCC-CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-------CCccEEEEEechHHHHHHHHHhhC----------c
Q 020621 54 VVAPDM-RGYGDSDSPQDPESYTIFHLVGDLIGLLDEL-------GEEQAFVVGHDWGAQIAWNLCLFR----------P 115 (323)
Q Consensus 54 vi~~d~-~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p 115 (323)
++-+|. .|.|.|.........+-++.++++.+++... ...+++|.|.|+||..+-.+|..- +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 999995 4899986443212223334456666666543 334899999999998777666431 1
Q ss_pred cccceeeeecccCCC
Q 020621 116 DRVKALVNLGVAYMP 130 (323)
Q Consensus 116 ~~v~~lvl~~~~~~~ 130 (323)
=.++++++.++...+
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 146788888876543
No 166
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.60 E-value=1.4e-05 Score=62.21 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=68.5
Q ss_pred CCCeEEEEcccCCCch--hHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--CccEEE
Q 020621 23 QGPLVLLIHGFPELWS--CWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG--EEQAFV 97 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~--~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~l 97 (323)
...|+|+.||+|.+.. ....+.+.+.+. |..+.++.. |.+.. +..-....++++.+.+.+.... .+-+++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~--~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG--DSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc--ccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 4568999999997644 344444444332 566666654 33321 1134466677776666665421 135899
Q ss_pred EEechHHHHHHHHHhhCcc--ccceeeeecccC
Q 020621 98 VGHDWGAQIAWNLCLFRPD--RVKALVNLGVAY 128 (323)
Q Consensus 98 vG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 128 (323)
+|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999999886 599999999764
No 167
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.48 E-value=5.7e-05 Score=63.31 Aligned_cols=66 Identities=9% Similarity=0.176 Sum_probs=49.9
Q ss_pred ccceEEEecCCCCCCCCcCccccccchhh------------------hhcCCC-ceEEEecCCCcccchhchHHHHHHHH
Q 020621 250 CVPTKFIIGDKHMGFKSFGTENYIKGDEF------------------KTLVPD-LEVVVIRDAQHYIQLEKAEQITEEIL 310 (323)
Q Consensus 250 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 310 (323)
..+||+..|+.|.+||....+.|++.-.+ .+...+ .++..+.+|||+.. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 47999999999999998776555432111 112223 67888899999996 59999999999
Q ss_pred HHhhhc
Q 020621 311 SHFRKK 316 (323)
Q Consensus 311 ~fl~~~ 316 (323)
.|++..
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999764
No 168
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.47 E-value=1.5e-06 Score=74.78 Aligned_cols=100 Identities=15% Similarity=0.196 Sum_probs=63.9
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhh----------------cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAE----------------HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLL 87 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~----------------~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l 87 (323)
|-||+|+||..|+...-+.++..... ..|+.+++|+-+ .-......+..++++-+.+.|
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHHH
Confidence 56999999999998777766544331 136777777642 111113445566666555555
Q ss_pred HHh-----C--------CccEEEEEechHHHHHHHHHhh---CccccceeeeecccC
Q 020621 88 DEL-----G--------EEQAFVVGHDWGAQIAWNLCLF---RPDRVKALVNLGVAY 128 (323)
Q Consensus 88 ~~~-----~--------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 128 (323)
+.. + .+.++|+||||||.+|...+.. .+..|.-++..++|-
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 533 2 1249999999999999877753 234566677666554
No 169
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.44 E-value=3.8e-05 Score=63.90 Aligned_cols=125 Identities=18% Similarity=0.070 Sum_probs=80.7
Q ss_pred ceeEEEEC---CeeEEEeecC------CCCeEEEEcccCCCchhHHHHHHhhh-----hc-------------CcEEEee
Q 020621 5 NHRRVHTN---GIWMHIAEKG------QGPLVLLIHGFPELWSCWKYQINHLA-----EH-------------GYHVVAP 57 (323)
Q Consensus 5 ~~~~~~~~---g~~~~~~~~g------~~~~lv~~hG~~~~~~~~~~~~~~l~-----~~-------------G~~vi~~ 57 (323)
.+.+++++ +..++|.-.. +.|.||++.|.+|++..- .++.++- .. -.+++-+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 35677885 7888876432 368999999999987655 3332221 11 1478888
Q ss_pred CCC-CCCCCCCCCCC-CCCcHHHHHHHHHHHHHHh-------CCccEEEEEechHHHHHHHHHhh----C-----c-ccc
Q 020621 58 DMR-GYGDSDSPQDP-ESYTIFHLVGDLIGLLDEL-------GEEQAFVVGHDWGAQIAWNLCLF----R-----P-DRV 118 (323)
Q Consensus 58 d~~-G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~-----p-~~v 118 (323)
|.| |.|.|-..... ...+-+..++|...++... ..+++.|.|-|++|..+-.+|.. . | -.+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 887 88888644321 1234445566666655432 44589999999999777766653 2 1 257
Q ss_pred ceeeeecccCCC
Q 020621 119 KALVNLGVAYMP 130 (323)
Q Consensus 119 ~~lvl~~~~~~~ 130 (323)
+|+++-+|...+
T Consensus 204 kG~~IGNg~td~ 215 (454)
T KOG1282|consen 204 KGYAIGNGLTDP 215 (454)
T ss_pred eEEEecCcccCc
Confidence 888877776554
No 170
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.40 E-value=8.9e-07 Score=69.32 Aligned_cols=107 Identities=19% Similarity=0.233 Sum_probs=64.5
Q ss_pred CCeEEEEcccCCCchhH--HHHHHhhhhcC----cEEEeeCCCCCCCCCC-----------CC-CCCCCcHH-HHHHHHH
Q 020621 24 GPLVLLIHGFPELWSCW--KYQINHLAEHG----YHVVAPDMRGYGDSDS-----------PQ-DPESYTIF-HLVGDLI 84 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~--~~~~~~l~~~G----~~vi~~d~~G~G~s~~-----------~~-~~~~~~~~-~~~~~i~ 84 (323)
-|+|+++||.......+ ...+..+...| .-+++++..+.+.... .. ......+. -+.++|.
T Consensus 24 ~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~ 103 (251)
T PF00756_consen 24 YPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELI 103 (251)
T ss_dssp EEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHH
T ss_pred CEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccch
Confidence 47999999972222222 12233333332 4466666655541110 00 00111222 3445666
Q ss_pred HHHHHh-CCc--cEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 85 GLLDEL-GEE--QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 85 ~~l~~~-~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
..++.. ... +..++|+||||..|+.++.++|+.+.++++++|....
T Consensus 104 p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 104 PYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 666543 222 3789999999999999999999999999999987654
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.39 E-value=3.3e-06 Score=69.96 Aligned_cols=108 Identities=18% Similarity=0.295 Sum_probs=68.3
Q ss_pred CCeeEEEeecCCCCeEEEEc-ccCCCchhHHHHHHhhhhcCcEE------EeeCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 020621 12 NGIWMHIAEKGQGPLVLLIH-GFPELWSCWKYQINHLAEHGYHV------VAPDMRGYGDSDSPQDPESYTIFHLVGDLI 84 (323)
Q Consensus 12 ~g~~~~~~~~g~~~~lv~~h-G~~~~~~~~~~~~~~l~~~G~~v------i~~d~~G~G~s~~~~~~~~~~~~~~~~~i~ 84 (323)
+|..+.+...|....|-.+- ........|..+++.|.+.||.. .-+|+|- | + . ..++....+.
T Consensus 38 ~gv~i~~~~~g~~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~---~-~~~~~~~~lk 107 (389)
T PF02450_consen 38 PGVEIRVPGFGGTSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---P---A-ERDEYFTKLK 107 (389)
T ss_pred CCceeecCCCCceeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhh---c---h---h-hHHHHHHHHH
Confidence 55556655555222222221 22222227999999999877742 2267761 1 1 0 2334555555
Q ss_pred HHHHHh---CCccEEEEEechHHHHHHHHHhhCcc------ccceeeeecccCC
Q 020621 85 GLLDEL---GEEQAFVVGHDWGAQIAWNLCLFRPD------RVKALVNLGVAYM 129 (323)
Q Consensus 85 ~~l~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~ 129 (323)
+.++.. ..++++|+||||||.++..+....+. .|+++|.++++..
T Consensus 108 ~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 108 QLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 555543 35799999999999999999987643 5999999998764
No 172
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.35 E-value=1e-05 Score=65.28 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=31.7
Q ss_pred cEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999886665544
No 173
>COG0627 Predicted esterase [General function prediction only]
Probab=98.32 E-value=1.4e-05 Score=63.61 Aligned_cols=108 Identities=25% Similarity=0.286 Sum_probs=70.2
Q ss_pred CeEEEEcccCCCchhHH---HHHHhhhhcCcEEEeeCCC--------------CCCCCCCCCCC-----C-CCcHHHH-H
Q 020621 25 PLVLLIHGFPELWSCWK---YQINHLAEHGYHVVAPDMR--------------GYGDSDSPQDP-----E-SYTIFHL-V 80 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~---~~~~~l~~~G~~vi~~d~~--------------G~G~s~~~~~~-----~-~~~~~~~-~ 80 (323)
|+++++||..++...|. .+-....+.|+.++++|-. |-+.|-..... . .+.++++ .
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 68888899988864432 2234445557777776332 43333221110 1 2555554 3
Q ss_pred HHHHHHHHHhCC-----ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCCC
Q 020621 81 GDLIGLLDELGE-----EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPRS 132 (323)
Q Consensus 81 ~~i~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 132 (323)
+++-+.+++... ++..++||||||.=|+.+|.++|+++..+..+++...+..
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSS 191 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccc
Confidence 355544443322 2688999999999999999999999999999998876653
No 174
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.32 E-value=9.5e-07 Score=63.70 Aligned_cols=107 Identities=23% Similarity=0.378 Sum_probs=69.9
Q ss_pred CCeEEEEcccCCCchhHH---HHHHhhhhcCcEEEeeCCCCCCCCCCCC----C----------------CCCCcHHHH-
Q 020621 24 GPLVLLIHGFPELWSCWK---YQINHLAEHGYHVVAPDMRGYGDSDSPQ----D----------------PESYTIFHL- 79 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~---~~~~~l~~~G~~vi~~d~~G~G~s~~~~----~----------------~~~~~~~~~- 79 (323)
-|+|.++.|+..+.+.+. .+-+.-.++|+.|+.+|---.|..-... + ...|.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 478999999998877653 2234456679999999964333221110 0 011222222
Q ss_pred HHHHHHHHHH----hCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 80 VGDLIGLLDE----LGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 80 ~~~i~~~l~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
++.+-++++. ++..++.+.||||||.=|+..+.+.|.+.+++-..+|...+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 3344444442 23347899999999999999999999988888888776654
No 175
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00016 Score=59.99 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCCeEEEEcccCCCchhHHHHHHh-------------------hhhcCcEEEeeC-CCCCCCCCCCCCCCCCcHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINH-------------------LAEHGYHVVAPD-MRGYGDSDSPQDPESYTIFHLVGD 82 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~-------------------l~~~G~~vi~~d-~~G~G~s~~~~~~~~~~~~~~~~~ 82 (323)
+.|.++++.|.+|++..|..+.+. +.+. -.++-+| --|.|.|....+....++....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchh
Confidence 368999999999999888766311 1112 3688999 459999986333345566666666
Q ss_pred HHHHHHHh---------CCccEEEEEechHHHHHHHHHhhCcc---ccceeeeecccCC
Q 020621 83 LIGLLDEL---------GEEQAFVVGHDWGAQIAWNLCLFRPD---RVKALVNLGVAYM 129 (323)
Q Consensus 83 i~~~l~~~---------~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~ 129 (323)
+..+.+.+ ...+.+|+|-|+||.-+..+|...-+ ..++++++.+...
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 66655543 23489999999999988888865433 3566676665543
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.23 E-value=9.7e-06 Score=70.14 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=64.3
Q ss_pred CCCeEEEEcccCC---CchhHHHHHHhhhhc--CcEEEeeCCC-C---CCCCCCCCCCCCCcHHHH---HHHHHHHHHHh
Q 020621 23 QGPLVLLIHGFPE---LWSCWKYQINHLAEH--GYHVVAPDMR-G---YGDSDSPQDPESYTIFHL---VGDLIGLLDEL 90 (323)
Q Consensus 23 ~~~~lv~~hG~~~---~~~~~~~~~~~l~~~--G~~vi~~d~~-G---~G~s~~~~~~~~~~~~~~---~~~i~~~l~~~ 90 (323)
+.|++|++||.+. +...+ ....|... |+.|+++++| | +..+..........+.|+ .+.+.+-++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 3589999999652 22222 12333333 3899999999 3 333322111123333333 33444445555
Q ss_pred CC--ccEEEEEechHHHHHHHHHhh--CccccceeeeecccCCC
Q 020621 91 GE--EQAFVVGHDWGAQIAWNLCLF--RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 91 ~~--~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~ 130 (323)
+. ++|.|+|+|.||..+..++.. .+..++++|+.++....
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 43 489999999999999887765 24568899988876543
No 177
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.22 E-value=2.3e-06 Score=56.29 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=53.9
Q ss_pred cccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
...|+|+|.++.|+.+|.+. ++.+++.+++++++.+++.||..+...-.-+.+.+.+||.+-
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~------a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEG------ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCCEEEEecCcCCCCcHHH------HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 35899999999999999887 688899999999999999999888655567888999999854
No 178
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.20 E-value=1e-05 Score=63.86 Aligned_cols=106 Identities=13% Similarity=0.137 Sum_probs=65.8
Q ss_pred CCeEEEEcccCCCchh-HHHHHHhhhhcC--cEEEeeCCCCCCCCCCCC---CCCCCcHHHHHHHHHHHHHHhCCccEEE
Q 020621 24 GPLVLLIHGFPELWSC-WKYQINHLAEHG--YHVVAPDMRGYGDSDSPQ---DPESYTIFHLVGDLIGLLDELGEEQAFV 97 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~-~~~~~~~l~~~G--~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~i~~~l~~~~~~~~~l 97 (323)
+..+||+||+..+-+. -...++-....| ..++.+-+|..|.--.-. ....++-..+..-+..+.+....++++|
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~i 195 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYL 195 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEE
Confidence 4689999999876332 223333333222 578888888766532211 1123344444444444444446778999
Q ss_pred EEechHHHHHHHHHhh--------CccccceeeeecccCC
Q 020621 98 VGHDWGAQIAWNLCLF--------RPDRVKALVNLGVAYM 129 (323)
Q Consensus 98 vG~S~Gg~~a~~~a~~--------~p~~v~~lvl~~~~~~ 129 (323)
++||||..++++.... .+.+++.+|+.+|-..
T Consensus 196 lAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 196 LAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 9999999999887754 2346888888877543
No 179
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=2e-05 Score=66.65 Aligned_cols=125 Identities=16% Similarity=0.164 Sum_probs=79.5
Q ss_pred eeEEEE-CCeeEEEe----ec----CCCCeEEEEcccCCCc--hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC--C--
Q 020621 6 HRRVHT-NGIWMHIA----EK----GQGPLVLLIHGFPELW--SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ--D-- 70 (323)
Q Consensus 6 ~~~~~~-~g~~~~~~----~~----g~~~~lv~~hG~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~--~-- 70 (323)
..++.. ||..+... .. |+.|.+|..+|.-+-+ -.|..--..|..+|+-....|.||=|.=.... +
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~ 522 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGR 522 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccc
Confidence 344444 77765422 11 3567555555443321 12433333455688888888999976543211 1
Q ss_pred --CCCCcHHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 71 --PESYTIFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 71 --~~~~~~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
-..-+++|++.-...+++.- ..++..+.|.|.||.++..++..+|+.+.++|+-.|....
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 13446666666666666532 4558999999999999999999999999999987776543
No 180
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.16 E-value=7e-05 Score=60.53 Aligned_cols=66 Identities=9% Similarity=0.176 Sum_probs=49.1
Q ss_pred ccceEEEecCCCCCCCCcCccccccchhh------------------hhcCCC-ceEEEecCCCcccchhchHHHHHHHH
Q 020621 250 CVPTKFIIGDKHMGFKSFGTENYIKGDEF------------------KTLVPD-LEVVVIRDAQHYIQLEKAEQITEEIL 310 (323)
Q Consensus 250 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 310 (323)
.++||+..|+.|.+|+....+.|++.-.+ .+...+ .++..+.+|||+.+ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 47999999999999998665555432111 111123 67888889999996 59999999999
Q ss_pred HHhhhc
Q 020621 311 SHFRKK 316 (323)
Q Consensus 311 ~fl~~~ 316 (323)
.|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999764
No 181
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.12 E-value=0.0001 Score=59.07 Aligned_cols=93 Identities=24% Similarity=0.222 Sum_probs=63.9
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCccEEEEEec
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQAFVVGHD 101 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~~~lvG~S 101 (323)
.-||+.|=|+-.+.=..+..+|.++|+.|+-+|-.-+=.| ..+.++.+.|+..+++.. +.+++.|+|+|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS-------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc-------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4555555554444345567889999999999986533333 336678888888888765 66799999999
Q ss_pred hHHHHHHHHHhhCcc----ccceeeeec
Q 020621 102 WGAQIAWNLCLFRPD----RVKALVNLG 125 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~----~v~~lvl~~ 125 (323)
+|+-+.-..-.+.|. +|+.+.|++
T Consensus 335 fGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 335 FGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred ccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 999887666655553 344444443
No 182
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=3e-05 Score=58.43 Aligned_cols=99 Identities=22% Similarity=0.270 Sum_probs=69.7
Q ss_pred CeEEEEcccCCCchh--HHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--CccEEEEE
Q 020621 25 PLVLLIHGFPELWSC--WKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG--EEQAFVVG 99 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~--~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~lvG 99 (323)
.|+|++||++.+... ...+.+.+.+. |..|++.|. |-| . .+..-....++++.+.+.+.... .+-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~--~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I--KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c--chhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 589999999987665 66666666665 788999985 333 1 11123355566666666555332 23589999
Q ss_pred echHHHHHHHHHhhCcc-ccceeeeecccC
Q 020621 100 HDWGAQIAWNLCLFRPD-RVKALVNLGVAY 128 (323)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 128 (323)
.|.||.++-.++..-++ .|..+|.++++-
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999999987554 699999998754
No 183
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.11 E-value=2.8e-05 Score=66.14 Aligned_cols=120 Identities=15% Similarity=0.202 Sum_probs=81.3
Q ss_pred CCeeEEE----ee----cCCCCeEEEEcccCCCc--hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC------CCCCCc
Q 020621 12 NGIWMHI----AE----KGQGPLVLLIHGFPELW--SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ------DPESYT 75 (323)
Q Consensus 12 ~g~~~~~----~~----~g~~~~lv~~hG~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~------~~~~~~ 75 (323)
||.++.+ .. .|++|.+|..=|.-+.+ ..|....-.|.++||---....||=|.=.... .-..-+
T Consensus 428 dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NT 507 (682)
T COG1770 428 DGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNT 507 (682)
T ss_pred CCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhcccc
Confidence 7777653 32 23567666655543322 23443344577889877777788876654321 113557
Q ss_pred HHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCCC
Q 020621 76 IFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMPR 131 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 131 (323)
+.|+++....+++.- ..++++++|-|.||++.-..+...|+.++++|+-.|.....
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVL 565 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchh
Confidence 778877777777643 33479999999999999999999999999999988876553
No 184
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.06 E-value=2.3e-05 Score=65.78 Aligned_cols=125 Identities=16% Similarity=0.118 Sum_probs=80.9
Q ss_pred cceeEEEE-CCeeEEEeecC------CCCeEEEEcccCCC--chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC--CCC
Q 020621 4 INHRRVHT-NGIWMHIAEKG------QGPLVLLIHGFPEL--WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ--DPE 72 (323)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~g------~~~~lv~~hG~~~~--~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~--~~~ 72 (323)
++..+.+. ||.+|.|...+ +.|++|.-=|...- .-.|.+......++|...+..+.||=|.=.+.- ...
T Consensus 394 veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~ 473 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGM 473 (648)
T ss_pred EEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHh
Confidence 34444444 99999987663 35666554443322 223555567777888888889999987764321 001
Q ss_pred CCcHHHHHHHHHHHHHHh------CCccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 73 SYTIFHLVGDLIGLLDEL------GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 73 ~~~~~~~~~~i~~~l~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
..+-+...+|..++.+.| ..+++.+.|-|=||.+.-....++|+.+.++|+--|..
T Consensus 474 k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 474 KENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 123334445555555554 23478999999999999988899999888877665544
No 185
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=98.03 E-value=0.00026 Score=57.16 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=80.3
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHhC---CccEEEE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDP-ESYTIFHLVGDLIGLLDELG---EEQAFVV 98 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~~~i~~~l~~~~---~~~~~lv 98 (323)
+.|+|+..-|++.+..-...-...|.+ -+-+.+++|-+|.|.+.+.. ...++.+.+.|.+.+++.+. ..+.+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 468888888988764433322233333 47899999999999876632 34588899999998888763 3578888
Q ss_pred EechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 99 GHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
|-|=||+.++.+=.-+|+.|++.|.-..+..
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999999999999999998776654
No 186
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.02 E-value=6.4e-05 Score=60.65 Aligned_cols=106 Identities=12% Similarity=0.160 Sum_probs=70.7
Q ss_pred CCCeEEEEcccCCCchhH----HH---HHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccE
Q 020621 23 QGPLVLLIHGFPELWSCW----KY---QINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQA 95 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~----~~---~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 95 (323)
+.|+||++||+|-.-... .. +...|. . ..++++|+.-...-.. ...-...+.+.++-...+++..|.+++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~-~SILvLDYsLt~~~~~-~~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-E-VSILVLDYSLTSSDEH-GHKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-C-CeEEEEeccccccccC-CCcCchHHHHHHHHHHHHHhccCCCeE
Confidence 468999999988543222 21 223333 3 5889988864431101 111344667777778888877788999
Q ss_pred EEEEechHHHHHHHHHhhCc-----cccceeeeecccCCCC
Q 020621 96 FVVGHDWGAQIAWNLCLFRP-----DRVKALVNLGVAYMPR 131 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~ 131 (323)
+|+|-|.||.+++.+.+... ..-+++|+++|...+.
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999998775421 1357999999987653
No 187
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.01 E-value=5.9e-06 Score=63.61 Aligned_cols=103 Identities=17% Similarity=0.106 Sum_probs=55.1
Q ss_pred CCeEEEEcccCCCc---hhHHHHHHhhhhc--CcEEEeeCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHhC--CccE
Q 020621 24 GPLVLLIHGFPELW---SCWKYQINHLAEH--GYHVVAPDMRGYGDS-DSPQDPESYTIFHLVGDLIGLLDELG--EEQA 95 (323)
Q Consensus 24 ~~~lv~~hG~~~~~---~~~~~~~~~l~~~--G~~vi~~d~~G~G~s-~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~ 95 (323)
..|||+.||+|.+. ..+..+...+.+. |-.|.+++.- -+.+ +... .--.+..+.++.+.+.++... .+-+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~-s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVEN-SFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHH-HHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhh-hHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 35899999999753 3455444433332 6778888762 2111 1000 011244566666666665421 1369
Q ss_pred EEEEechHHHHHHHHHhhCcc-ccceeeeecccC
Q 020621 96 FVVGHDWGAQIAWNLCLFRPD-RVKALVNLGVAY 128 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 128 (323)
+++|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999865 699999999764
No 188
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.99 E-value=0.00011 Score=59.00 Aligned_cols=64 Identities=11% Similarity=0.199 Sum_probs=46.2
Q ss_pred ccc-cceEEEecCCCCCCCCcCccccccchhhhhcCC-CceEEEecCCCcccchhchH---HHHHHHHHHhhhc
Q 020621 248 KIC-VPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVP-DLEVVVIRDAQHYIQLEKAE---QITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 316 (323)
++. +|+|+++|.+|..+|.......+ ..... ..+...+++++|......+. +..+.+.+|+.+.
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~-----~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLY-----EAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHH-----hhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 455 79999999999999988754332 22222 46778888999988754333 6788888888764
No 189
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.99 E-value=0.0014 Score=50.47 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=75.9
Q ss_pred CCeEEEEcccCCCch-hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEech
Q 020621 24 GPLVLLIHGFPELWS-CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDW 102 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~ 102 (323)
.|.|+++-.+.|+.. ..+...+.|... ..|+..|+-.--.-+... ...+++|+++-+.+.+..+|.+ +++++.|.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 467788777777644 456667778776 789999986443332222 6789999999999999999975 78888887
Q ss_pred HHH-----HHHHHHhhCccccceeeeecccCCCCC
Q 020621 103 GAQ-----IAWNLCLFRPDRVKALVNLGVAYMPRS 132 (323)
Q Consensus 103 Gg~-----~a~~~a~~~p~~v~~lvl~~~~~~~~~ 132 (323)
-+. ++++.+...|..-...++++++.....
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~ 213 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARK 213 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCcccccc
Confidence 654 444444556777889999998876543
No 190
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.99 E-value=0.0003 Score=57.07 Aligned_cols=60 Identities=10% Similarity=0.177 Sum_probs=47.5
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCC-ceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD-LEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
++++|-++|.|..|.+..++... .+-..+|+ ..+..+|+++|.... ..+.+.+..|+...
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~------~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSN------FYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred hcCccEEEEecCCCceeccCchH------HHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 78999999999999999998753 34445554 689999999998766 56677788887764
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.86 E-value=1.9e-05 Score=64.57 Aligned_cols=88 Identities=18% Similarity=0.282 Sum_probs=59.1
Q ss_pred hhHHHHHHhhhhcCcE------EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 38 SCWKYQINHLAEHGYH------VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 38 ~~~~~~~~~l~~~G~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
..|..+++.|..-||. -..+|+| .|.......+..+..+..-|....+.-|.+|++|++|||||.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4788889999988886 4556777 222222112223334444444444444778999999999999999999
Q ss_pred hhCcc--------ccceeeeecccC
Q 020621 112 LFRPD--------RVKALVNLGVAY 128 (323)
Q Consensus 112 ~~~p~--------~v~~lvl~~~~~ 128 (323)
..+++ .|++++.++++.
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchh
Confidence 88776 477777777654
No 192
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.86 E-value=3.1e-05 Score=63.88 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=72.5
Q ss_pred CCeeEEEeecC----CCCeEEEEcccC---CCchhHHHHHHhhhhcC-cEEEeeCCC-C-CCCCCC---C---CCCCCCc
Q 020621 12 NGIWMHIAEKG----QGPLVLLIHGFP---ELWSCWKYQINHLAEHG-YHVVAPDMR-G-YGDSDS---P---QDPESYT 75 (323)
Q Consensus 12 ~g~~~~~~~~g----~~~~lv~~hG~~---~~~~~~~~~~~~l~~~G-~~vi~~d~~-G-~G~s~~---~---~~~~~~~ 75 (323)
|...+.+.... +.|++|+|||.+ ++......--..|+++| +-|+++++| | .|.=+. . .......
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 44445443322 349999999976 33333223346788887 889999988 1 121111 1 1011234
Q ss_pred HHHH---HHHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhh--CccccceeeeecccCC
Q 020621 76 IFHL---VGDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLF--RPDRVKALVNLGVAYM 129 (323)
Q Consensus 76 ~~~~---~~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 129 (323)
+.|+ .+.+.+-|+++|.+ .|.|+|+|.||+.++.+.+. ....++++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 4444 34556677777655 69999999999988877664 2236788888887664
No 193
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.86 E-value=0.00014 Score=58.54 Aligned_cols=104 Identities=19% Similarity=0.149 Sum_probs=75.8
Q ss_pred CeEEEEcccCCCchhHHHH---HHhhh-hcCcEEEeeCCCCCCCCCCCCC--------CCCCcHHHHHHHHHHHHHHhCC
Q 020621 25 PLVLLIHGFPELWSCWKYQ---INHLA-EHGYHVVAPDMRGYGDSDSPQD--------PESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~---~~~l~-~~G~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
-||+|.-|.-++-+.+..- +-.++ +.+--++..++|-+|.|.+-.+ ..-.+.++...|...++.++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 5788888888877665432 22232 3356789999999999976432 1223667777788888877743
Q ss_pred ------ccEEEEEechHHHHHHHHHhhCccccceeeeecccC
Q 020621 93 ------EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 93 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
.+++.+|-|+|||+|..+=.++|+.|.|.+..+.|.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 389999999999999999999999888777666544
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.84 E-value=5.8e-05 Score=64.00 Aligned_cols=90 Identities=20% Similarity=0.290 Sum_probs=58.3
Q ss_pred hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCccEEEEEechHHHHHHHHHhh
Q 020621 38 SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL----GEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 38 ~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
..|..+++.|.+.||. -.++.|....-+.........+++-..++..++.. +.++++|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3678999999999986 34554443332221101112344545555555533 45799999999999999988763
Q ss_pred C-----------c----cccceeeeecccCC
Q 020621 114 R-----------P----DRVKALVNLGVAYM 129 (323)
Q Consensus 114 ~-----------p----~~v~~lvl~~~~~~ 129 (323)
- + ..|+++|.++++..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 2 1 25899999998754
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.80 E-value=0.00033 Score=51.05 Aligned_cols=106 Identities=23% Similarity=0.253 Sum_probs=66.0
Q ss_pred CCeEEEEcccCC-CchhHH---------------HHHHhhhhcCcEEEeeCCCC---CCCCCCCCCCCCCc-HHHHHHHH
Q 020621 24 GPLVLLIHGFPE-LWSCWK---------------YQINHLAEHGYHVVAPDMRG---YGDSDSPQDPESYT-IFHLVGDL 83 (323)
Q Consensus 24 ~~~lv~~hG~~~-~~~~~~---------------~~~~~l~~~G~~vi~~d~~G---~G~s~~~~~~~~~~-~~~~~~~i 83 (323)
...+|+|||.|- ....|. ++++...+.||.|++.+--- +-.+...+.-...+ .+...--.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 458999999874 344553 23444455699999987431 11111111001112 22222233
Q ss_pred HHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--ccceeeeecccCC
Q 020621 84 IGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALVNLGVAYM 129 (323)
Q Consensus 84 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~ 129 (323)
..++.-...+.+.++.||+||...+.+..++|+ +|.++.+-+++..
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 444445566789999999999999999999985 7888888777643
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.78 E-value=0.00021 Score=59.03 Aligned_cols=108 Identities=17% Similarity=0.240 Sum_probs=83.4
Q ss_pred CCCeEEEEcccCCCchhHH-----HHHHhhhhcCcEEEeeCCCCCCCCCCCCC-----CCCCcHHHHHHHHHHHHHHhCC
Q 020621 23 QGPLVLLIHGFPELWSCWK-----YQINHLAEHGYHVVAPDMRGYGDSDSPQD-----PESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~-----~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
.+|..|+|-|=+.....|. .....-.+.|-.|+..++|=+|.|.+..+ ..-.+..+...|+.++|++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 5788888888776665552 22233344588999999999999865443 2345778899999999998732
Q ss_pred -------ccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 93 -------EQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 93 -------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
.|.+.+|-|+.|.++..+=.++|+.+.+-|..+++...
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 28899999999999999999999999999888876543
No 197
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.74 E-value=0.00016 Score=63.53 Aligned_cols=119 Identities=16% Similarity=0.138 Sum_probs=65.1
Q ss_pred CCeeEEEeecC---C---CCeEEEEcccCC---Cch-hHHHHHHhhhhcCcEEEeeCCC----CCCCCCCCCCC-CCCcH
Q 020621 12 NGIWMHIAEKG---Q---GPLVLLIHGFPE---LWS-CWKYQINHLAEHGYHVVAPDMR----GYGDSDSPQDP-ESYTI 76 (323)
Q Consensus 12 ~g~~~~~~~~g---~---~~~lv~~hG~~~---~~~-~~~~~~~~l~~~G~~vi~~d~~----G~G~s~~~~~~-~~~~~ 76 (323)
|-..+.+.... + -|++|+|||.+. ++. ........+++.+.-|+++++| |+-.+...... ..+.+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 44555544432 2 389999999763 221 2222234455668999999998 43333222111 34444
Q ss_pred HHH---HHHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhh--CccccceeeeecccCCC
Q 020621 77 FHL---VGDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLF--RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 77 ~~~---~~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~ 130 (323)
.|+ .+.|.+-|...|.+ +|.|+|||.||..+...+.. ....++++|+.++....
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 444 44555666667654 79999999999877665544 22479999999875443
No 198
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.70 E-value=0.00076 Score=52.36 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=59.6
Q ss_pred CCCeEEEEcccCC--CchhHHHHHHhhhhcC----cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-----C
Q 020621 23 QGPLVLLIHGFPE--LWSCWKYQINHLAEHG----YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL-----G 91 (323)
Q Consensus 23 ~~~~lv~~hG~~~--~~~~~~~~~~~l~~~G----~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~-----~ 91 (323)
+-|.+++.||-.. +...+. +.+.|...| -.++.+|.-..-.....-.-.......+++++.=.++.. .
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred cccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 4588999998432 222232 233333332 345555543100000000001122333444444444432 1
Q ss_pred CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 92 EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 92 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
...-+|+|.|+||.+++..+..+|+++-.++..+|.+..
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 235789999999999999999999999999988876543
No 199
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.63 E-value=0.00017 Score=51.69 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHh----CCccEEEEEechHHHHHHHHHhhCcc----ccceeeeecccCC
Q 020621 78 HLVGDLIGLLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPD----RVKALVNLGVAYM 129 (323)
Q Consensus 78 ~~~~~i~~~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~ 129 (323)
.+...+...++.. ...+++++|||+||.+|..++...+. .+..++.++++..
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 3444455555443 56789999999999999998887654 5666777776543
No 200
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.60 E-value=0.0063 Score=46.18 Aligned_cols=92 Identities=18% Similarity=0.219 Sum_probs=55.8
Q ss_pred eEEEEcccCC---CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHh----CC----c
Q 020621 26 LVLLIHGFPE---LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTI-FHLVGDLIGLLDEL----GE----E 93 (323)
Q Consensus 26 ~lv~~hG~~~---~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~-~~~~~~i~~~l~~~----~~----~ 93 (323)
+|=|+-|..- ..-.|+.+.+.|+++||.|++.=+.- |. +.... .+..+.....++.+ +. -
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tf-------DH~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TF-------DHQAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CC-------cHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 4555555432 23468889999999999999986631 10 11111 11122222222222 11 2
Q ss_pred cEEEEEechHHHHHHHHHhhCccccceeeeec
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
+++-+|||+|+.+-+.+...++..-++-++++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 67889999999999888887765556667665
No 201
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.52 E-value=0.0003 Score=49.52 Aligned_cols=38 Identities=16% Similarity=0.199 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 77 FHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
++..+.+.++++.....++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 34555666666555656899999999999999888763
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.41 E-value=0.0036 Score=47.61 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhC----ccccceeeeecccCCC
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR----PDRVKALVNLGVAYMP 130 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~~ 130 (323)
.++-+..+++..+. ++++.|||.||.+|..++... .++|.+++..++|...
T Consensus 71 A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 71 ALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 34444455554443 599999999999999999874 3578999999988765
No 203
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.24 E-value=0.0049 Score=44.75 Aligned_cols=55 Identities=25% Similarity=0.231 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhC-----CccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 76 IFHLVGDLIGLLDELG-----EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
-+.-+.++..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++...
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4455667777777652 237899999999999999888867789999999987653
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.96 E-value=0.0019 Score=49.79 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=20.1
Q ss_pred CCccEEEEEechHHHHHHHHHhhC
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 345899999999999999888753
No 205
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.87 E-value=0.0036 Score=41.57 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=25.9
Q ss_pred cceeEEEECCeeEEEeecC----CCCeEEEEcccCCCchhHHHH
Q 020621 4 INHRRVHTNGIWMHIAEKG----QGPLVLLIHGFPELWSCWKYQ 43 (323)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g----~~~~lv~~hG~~~~~~~~~~~ 43 (323)
+....++++|..||+.... +..||||+||+++|-..|.++
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred CCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 3455677799999988764 345999999999998877655
No 206
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.84 E-value=0.0021 Score=49.20 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=39.2
Q ss_pred HHHHHHHHH---hCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCC
Q 020621 81 GDLIGLLDE---LGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 81 ~~i~~~l~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 129 (323)
+++.-+++. .+.++..++|||+||.+++.....+|+.+...++++|...
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 344445543 2445789999999999999999999999999999998753
No 207
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.83 E-value=0.0037 Score=36.60 Aligned_cols=38 Identities=26% Similarity=0.421 Sum_probs=22.4
Q ss_pred cceeEEEE-CCeeEEEeecC----------CCCeEEEEcccCCCchhHH
Q 020621 4 INHRRVHT-NGIWMHIAEKG----------QGPLVLLIHGFPELWSCWK 41 (323)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~g----------~~~~lv~~hG~~~~~~~~~ 41 (323)
.+...|++ ||.-+...... ++|+|++.||+.+++..|-
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 56677777 89888765431 3589999999999999883
No 208
>PLN02162 triacylglycerol lipase
Probab=96.80 E-value=0.0036 Score=52.02 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
..++.+.+.+++......++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445556666666655568999999999999998765
No 209
>PLN00413 triacylglycerol lipase
Probab=96.80 E-value=0.0041 Score=51.86 Aligned_cols=37 Identities=16% Similarity=0.334 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
..+..+.+.++++.....++++.|||+||.+|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456677778887777678999999999999998875
No 210
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.79 E-value=0.033 Score=45.08 Aligned_cols=66 Identities=9% Similarity=0.089 Sum_probs=52.2
Q ss_pred cccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch-hchHHHHHHHHHHhhhc
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL-EKAEQITEEILSHFRKK 316 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 316 (323)
...+.+.+.+..|.++|.+..+++ .+......-+++.+-+.++-|..++ ..|....+...+|++..
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f--~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKF--IALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccccceeecCCccccccHHHHHHH--HHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 366888899999999999887665 2444555556777778899998866 48999999999999875
No 211
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.76 E-value=0.0027 Score=44.68 Aligned_cols=114 Identities=16% Similarity=0.149 Sum_probs=67.4
Q ss_pred CeeEEEeecC-CCCeEEEEcccCCCchhHHHH--HHhh---hhcC-cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH--
Q 020621 13 GIWMHIAEKG-QGPLVLLIHGFPELWSCWKYQ--INHL---AEHG-YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDL-- 83 (323)
Q Consensus 13 g~~~~~~~~g-~~~~lv~~hG~~~~~~~~~~~--~~~l---~~~G-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i-- 83 (323)
+..+.+...| .|.+||+.+--++.-..|..+ +..| .+.| ...++++ |....+-.. ...+..+.++--
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a--~h~~~adr~~rH~A 89 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLA--THKNAADRAERHRA 89 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhh--hcCCHHHHHHHHHH
Confidence 3445666677 456777777777766666543 2222 2334 2334443 332211111 122233333322
Q ss_pred --HHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 84 --IGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 84 --~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
..++++.-....++-|.||||..|+.+..++|+...++|.+++.+..
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 23444444446677899999999999999999999999999987654
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.72 E-value=0.004 Score=46.20 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=45.4
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCC----C---CCCCCcHHHHHHHHHHHHHHhCC-ccEEEEEechHHHHHHHHHhhC
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSP----Q---DPESYTIFHLVGDLIGLLDELGE-EQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~----~---~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
..+... .+|+++=+|-....... . ........|..+....+|++.+. ++++|+|||.|+.+..++...+
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 445555 68888877743221111 0 11234556666777777777744 5899999999999999998764
No 213
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.64 E-value=0.0072 Score=44.34 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=44.0
Q ss_pred cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH----HhCCccEEEEEechHHHHHHHHHhh------Ccccccee
Q 020621 52 YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD----ELGEEQAFVVGHDWGAQIAWNLCLF------RPDRVKAL 121 (323)
Q Consensus 52 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~----~~~~~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~l 121 (323)
..+..+++|-..... . ...+..+-+.++...++ .-...+++|+|+|.|+.++..++.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 556666666432221 0 12244444444444444 3355689999999999999998877 23589999
Q ss_pred eeecccCC
Q 020621 122 VNLGVAYM 129 (323)
Q Consensus 122 vl~~~~~~ 129 (323)
++++-+..
T Consensus 116 vlfGdP~~ 123 (179)
T PF01083_consen 116 VLFGDPRR 123 (179)
T ss_dssp EEES-TTT
T ss_pred EEecCCcc
Confidence 99986654
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.36 E-value=0.018 Score=50.84 Aligned_cols=117 Identities=16% Similarity=0.211 Sum_probs=64.2
Q ss_pred CCeeEEEeecC---C--CCeEEEEcccCC---CchhHHHH--HHhhhhcCcEEEeeCCC----CCCCCCCCCCCCCCcHH
Q 020621 12 NGIWMHIAEKG---Q--GPLVLLIHGFPE---LWSCWKYQ--INHLAEHGYHVVAPDMR----GYGDSDSPQDPESYTIF 77 (323)
Q Consensus 12 ~g~~~~~~~~g---~--~~~lv~~hG~~~---~~~~~~~~--~~~l~~~G~~vi~~d~~----G~G~s~~~~~~~~~~~~ 77 (323)
|...+.+.... + -|++|++||.+- +...+... ...+..+..-|+++.+| |+...........+.+.
T Consensus 95 DCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 95 DCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF 174 (545)
T ss_pred CCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH
Confidence 45555544332 2 589999999863 32223111 22333334667777776 32222211112455555
Q ss_pred HHHHH---HHHHHHHhC--CccEEEEEechHHHHHHHHHhh--CccccceeeeecccC
Q 020621 78 HLVGD---LIGLLDELG--EEQAFVVGHDWGAQIAWNLCLF--RPDRVKALVNLGVAY 128 (323)
Q Consensus 78 ~~~~~---i~~~l~~~~--~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 128 (323)
|++.. +.+-|...| .++|.|+|||.||..+..+... ......+.|..++..
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 54443 445555554 4489999999999988766642 123556666665543
No 215
>PLN02571 triacylglycerol lipase
Probab=96.27 E-value=0.0075 Score=49.75 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhh
Q 020621 77 FHLVGDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+++..++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566777777655433 68999999999999988864
No 216
>PLN02454 triacylglycerol lipase
Probab=96.27 E-value=0.0081 Score=49.50 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=22.9
Q ss_pred HHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhh
Q 020621 81 GDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 81 ~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 113 (323)
..|..+++..... ++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444433333 38999999999999998854
No 217
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.25 E-value=0.11 Score=36.53 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=54.6
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCc-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGY-HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGA 104 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg 104 (323)
.||..-|++..++....++ +.+. + -++++|+...... .++. ..+.+-||++|||=
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN-~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPEN-HDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCC-CcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHH
Confidence 7888889998887776553 2333 4 4678888633211 1111 12466799999999
Q ss_pred HHHHHHHhhCccccceeeeecccCCCCCC
Q 020621 105 QIAWNLCLFRPDRVKALVNLGVAYMPRSP 133 (323)
Q Consensus 105 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 133 (323)
.+|-++....+ +++.+.+++...+-+.
T Consensus 69 wvAeR~lqg~~--lksatAiNGTgLpcDd 95 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTGLPCDD 95 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCCCCccc
Confidence 99999888765 7778888876655443
No 218
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.23 E-value=0.14 Score=41.28 Aligned_cols=60 Identities=10% Similarity=0.177 Sum_probs=43.9
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCC-ceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD-LEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
++..|-.++.|..|.+.+++.. ..+....|+ ..+..+|+..|...-. .+.+.+..|++..
T Consensus 327 RLalpKyivnaSgDdff~pDsa------~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrf 387 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSA------NLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRF 387 (507)
T ss_pred hccccceeecccCCcccCCCcc------ceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHH
Confidence 7889999999999999988873 445567777 5688899999976433 3445555565543
No 219
>PLN02408 phospholipase A1
Probab=96.03 E-value=0.012 Score=47.90 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEechHHHHHHHHHhhC
Q 020621 79 LVGDLIGLLDELGEE--QAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
..+.|..+++..... ++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445566666655433 589999999999999888653
No 220
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.01 E-value=0.011 Score=48.14 Aligned_cols=88 Identities=22% Similarity=0.209 Sum_probs=52.1
Q ss_pred CCeEEEEcccCC-CchhHHHHHHhhhhcCcEEEeeCCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 24 GPLVLLIHGFPE-LWSCWKYQINHLAEHGYHVVAPDMRGY-GDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 24 ~~~lv~~hG~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
+-.+|++||+-+ +...|...+...... +.=..+..+|+ +......+.-.+=-...++++.+.+....++++..+|||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 347999999988 567787777666554 22112222332 222211111112223445556666655567899999999
Q ss_pred hHHHHHHHHHh
Q 020621 102 WGAQIAWNLCL 112 (323)
Q Consensus 102 ~Gg~~a~~~a~ 112 (323)
+||.++..+..
T Consensus 159 LGGLvar~AIg 169 (405)
T KOG4372|consen 159 LGGLVARYAIG 169 (405)
T ss_pred cCCeeeeEEEE
Confidence 99998865544
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.94 E-value=0.024 Score=45.89 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCccEEEEEechHHHHHHHHHhhCcc-----ccceeeeecccCCC
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFRPD-----RVKALVNLGVAYMP 130 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~ 130 (323)
+.+|+.|+|||+|+.+...+....++ .|+.+++++.|...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66799999999999998877655333 48999999876544
No 222
>PLN02310 triacylglycerol lipase
Probab=95.91 E-value=0.024 Score=46.78 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhC---C-ccEEEEEechHHHHHHHHHhh
Q 020621 77 FHLVGDLIGLLDELG---E-EQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
++..+.+..+++... . .++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666542 2 378999999999999988854
No 223
>PLN02934 triacylglycerol lipase
Probab=95.83 E-value=0.016 Score=48.84 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 77 FHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
......+.++++.....++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 445666777777666678999999999999998874
No 224
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.56 E-value=0.073 Score=49.66 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=66.4
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-ccEEEEEec
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE-EQAFVVGHD 101 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG~S 101 (323)
+.|++.|+|..-+......+++..|. .|.+|.-.... ....++++.+.-...-++.+.. .|..++|+|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC----------Ccchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 57899999999888777766665543 23333321111 1456888888877777777754 489999999
Q ss_pred hHHHHHHHHHhhC--ccccceeeeecccC
Q 020621 102 WGAQIAWNLCLFR--PDRVKALVNLGVAY 128 (323)
Q Consensus 102 ~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 128 (323)
+|+.++..+|... .+....+|++++.+
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999988653 23456699998764
No 225
>PLN02324 triacylglycerol lipase
Probab=95.49 E-value=0.025 Score=46.70 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEechHHHHHHHHHhh
Q 020621 79 LVGDLIGLLDELGE--EQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 79 ~~~~i~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
....|..+++.... .+|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44456666665443 268899999999999988854
No 226
>PLN02802 triacylglycerol lipase
Probab=95.28 E-value=0.031 Score=47.26 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEechHHHHHHHHHhhC
Q 020621 78 HLVGDLIGLLDELGE--EQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
+..+++..+++.... .+|++.|||+||.+|...|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344556666655432 2689999999999999887653
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.16 E-value=0.034 Score=47.13 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEechHHHHHHHHHhh
Q 020621 78 HLVGDLIGLLDELG----EEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 78 ~~~~~i~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+..++|..+++... ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566777776553 2368999999999999988854
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.16 E-value=0.11 Score=44.76 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=50.4
Q ss_pred cccceEEEecCCCCCCCCcCccccccchhhhhcCC-------C-ceEEEecCCCcccch--hchHHHHHHHHHHhhhc
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVP-------D-LEVVVIRDAQHYIQL--EKAEQITEEILSHFRKK 316 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~~ 316 (323)
---.+++.||..|.++|+....+|++ ++.+... + .++..+||.+|+.-- ..+-.....|.+|+++-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~--~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYE--RVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHH--HHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 35789999999999999999888874 3333332 1 489999999998643 34557889999999864
No 229
>PLN02753 triacylglycerol lipase
Probab=95.16 E-value=0.035 Score=47.13 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhC-----CccEEEEEechHHHHHHHHHhh
Q 020621 78 HLVGDLIGLLDELG-----EEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 78 ~~~~~i~~~l~~~~-----~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+....|..+++... ..+|++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455666665543 2479999999999999988853
No 230
>PLN02761 lipase class 3 family protein
Probab=94.94 E-value=0.045 Score=46.49 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhC-----C-ccEEEEEechHHHHHHHHHh
Q 020621 78 HLVGDLIGLLDELG-----E-EQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 78 ~~~~~i~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a~ 112 (323)
++...|..+++... . -+|++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34555666665542 1 26999999999999998875
No 231
>PLN02719 triacylglycerol lipase
Probab=94.84 E-value=0.049 Score=46.17 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEechHHHHHHHHHhh
Q 020621 79 LVGDLIGLLDELGE-----EQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 79 ~~~~i~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
....|..+++.... .++.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455555554431 278999999999999988854
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.41 E-value=0.21 Score=39.50 Aligned_cols=106 Identities=18% Similarity=0.158 Sum_probs=70.6
Q ss_pred CCCeEEEEcccCCCchh----HHHHH-----------HhhhhcCcEEEeeCCC-CCCCCCCCCC-CCCCcHHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSC----WKYQI-----------NHLAEHGYHVVAPDMR-GYGDSDSPQD-PESYTIFHLVGDLIG 85 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~----~~~~~-----------~~l~~~G~~vi~~d~~-G~G~s~~~~~-~~~~~~~~~~~~i~~ 85 (323)
..|..+++.|.++.+.. |+.+- ..|.. ..++.+|-| |.|.|-.... ....+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 35788899988775543 22221 11222 478888877 7888854332 234467788999999
Q ss_pred HHHHh-------CCccEEEEEechHHHHHHHHHhhCc---------cccceeeeecccCCC
Q 020621 86 LLDEL-------GEEQAFVVGHDWGAQIAWNLCLFRP---------DRVKALVNLGVAYMP 130 (323)
Q Consensus 86 ~l~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~lvl~~~~~~~ 130 (323)
+++.+ .-.|++++..|+||-+|..++...- -...+++|=++...+
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 99865 2348999999999999998886432 235667776665544
No 233
>PLN02847 triacylglycerol lipase
Probab=94.32 E-value=0.085 Score=45.59 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=19.0
Q ss_pred CCccEEEEEechHHHHHHHHHhh
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33489999999999999887764
No 234
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.24 E-value=0.52 Score=36.06 Aligned_cols=80 Identities=21% Similarity=0.165 Sum_probs=48.2
Q ss_pred CcEEEeeCCCCC-CC-CCCCCCCCCCcHHHHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCcc------ccce
Q 020621 51 GYHVVAPDMRGY-GD-SDSPQDPESYTIFHLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPD------RVKA 120 (323)
Q Consensus 51 G~~vi~~d~~G~-G~-s~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~ 120 (323)
|+.+..+++|.. +- +.........+..+=++.+.+.++.. ..++++++|+|+|+.++..++.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 566777777751 11 11111013446666666777777652 33589999999999999887765311 2345
Q ss_pred eeeecccCCC
Q 020621 121 LVNLGVAYMP 130 (323)
Q Consensus 121 lvl~~~~~~~ 130 (323)
+|+++-+..+
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 7777755444
No 235
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.05 E-value=0.055 Score=39.49 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=45.3
Q ss_pred ccceEEEecCCCCCCCCcCccccccchhhhhcCCC--ceEEEecCCCcccchhc---hHHHHHHHHHHhhh
Q 020621 250 CVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPD--LEVVVIRDAQHYIQLEK---AEQITEEILSHFRK 315 (323)
Q Consensus 250 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 315 (323)
+++++-|=|+.|.++.+..+.. +..+-...|. ...++.+|+||+..+.- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~A---A~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHA---AHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHH---HHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 5677889999999999876432 2334344444 46777899999976653 47888889999875
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.98 E-value=0.098 Score=42.78 Aligned_cols=37 Identities=24% Similarity=0.248 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhh
Q 020621 77 FHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
..+.+++..++.....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667777777877776689999999999999988865
No 237
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=93.64 E-value=0.86 Score=29.68 Aligned_cols=84 Identities=19% Similarity=0.209 Sum_probs=57.3
Q ss_pred hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHH--HHHHHHhhCcc
Q 020621 39 CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQ--IAWNLCLFRPD 116 (323)
Q Consensus 39 ~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~--~a~~~a~~~p~ 116 (323)
.|..+.+.+..+||..=.+.++..|.+....- ..-..+.=...+..+++.....+++|+|-|--.- +-..+|.++|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 34555566667778777788887766533220 0111134466778888888888999999997553 44577888999
Q ss_pred ccceeee
Q 020621 117 RVKALVN 123 (323)
Q Consensus 117 ~v~~lvl 123 (323)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9998864
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.35 E-value=0.33 Score=37.72 Aligned_cols=26 Identities=23% Similarity=0.301 Sum_probs=21.8
Q ss_pred hCCccEEEEEechHHHHHHHHHhhCc
Q 020621 90 LGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 90 ~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
....++.|-|||+||.+|..+..++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34458999999999999999988874
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.35 E-value=0.33 Score=37.72 Aligned_cols=26 Identities=23% Similarity=0.301 Sum_probs=21.8
Q ss_pred hCCccEEEEEechHHHHHHHHHhhCc
Q 020621 90 LGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 90 ~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
....++.|-|||+||.+|..+..++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34458999999999999999988874
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.16 E-value=0.47 Score=40.93 Aligned_cols=80 Identities=13% Similarity=0.153 Sum_probs=54.7
Q ss_pred hhcCcEEEeeCCCCCCCCCC--CCCCCCCc-----------HHHHHHHHHHHHHHh---CCccEEEEEechHHHHHHHHH
Q 020621 48 AEHGYHVVAPDMRGYGDSDS--PQDPESYT-----------IFHLVGDLIGLLDEL---GEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 48 ~~~G~~vi~~d~~G~G~s~~--~~~~~~~~-----------~~~~~~~i~~~l~~~---~~~~~~lvG~S~Gg~~a~~~a 111 (323)
..+||.++.-|- ||..+.. ... ...+ +.+.+..-+++++.. ..+.-+..|.|-||.-++..|
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred hhcCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHH
Confidence 345899999994 6655533 111 1122 233333334444443 334678899999999999999
Q ss_pred hhCccccceeeeecccCC
Q 020621 112 LFRPDRVKALVNLGVAYM 129 (323)
Q Consensus 112 ~~~p~~v~~lvl~~~~~~ 129 (323)
+++|+..++++.-+|+..
T Consensus 134 QryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 134 QRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HhChhhcCeEEeCCchHH
Confidence 999999999999988764
No 241
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.08 E-value=14 Score=31.82 Aligned_cols=102 Identities=19% Similarity=0.154 Sum_probs=64.5
Q ss_pred EEeecC--CCCeEEEEcccCCCchhHHHH--HHhhhhcCcE-EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 020621 17 HIAEKG--QGPLVLLIHGFPELWSCWKYQ--INHLAEHGYH-VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG 91 (323)
Q Consensus 17 ~~~~~g--~~~~lv~~hG~~~~~~~~~~~--~~~l~~~G~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~ 91 (323)
+|...| +.|..|...|+-. .+-|..+ +..| |.. .+.-|.|=-|.+--... ..+ -+.+.+-|.+.++.||
T Consensus 280 yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs-~ey-E~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 280 YYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS-DEY-EQGIINVIQEKLDYLG 353 (511)
T ss_pred EecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc-HHH-HHHHHHHHHHHHHHhC
Confidence 455556 4567777788765 4444433 3444 333 44458887776643321 112 3446667778888888
Q ss_pred Cc--cEEEEEechHHHHHHHHHhhCccccceeeeecc
Q 020621 92 EE--QAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126 (323)
Q Consensus 92 ~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 126 (323)
.+ .++|-|-|||..-|+.+++... -.++|+--|
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 76 6999999999999999998753 245554434
No 242
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=88.85 E-value=1.1 Score=38.88 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=52.6
Q ss_pred eEEEEcccCC---CchhHHHHHHhhh-hcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH---HhC--CccEE
Q 020621 26 LVLLIHGFPE---LWSCWKYQINHLA-EHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD---ELG--EEQAF 96 (323)
Q Consensus 26 ~lv~~hG~~~---~~~~~~~~~~~l~-~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~---~~~--~~~~~ 96 (323)
.|+-+||.|. ++.+-....+.++ +-|+.|+.+|+- -.+..+.....++..-..-=+|+ .+| .++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYS-----LAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYS-----LAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeec-----cCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 5777899873 2333333333332 237899999973 22222123333333222222222 223 35999
Q ss_pred EEEechHHHHHHHHHhhCc----cccceeeeecccC
Q 020621 97 VVGHDWGAQIAWNLCLFRP----DRVKALVNLGVAY 128 (323)
Q Consensus 97 lvG~S~Gg~~a~~~a~~~p----~~v~~lvl~~~~~ 128 (323)
++|-|.||.+.+..+.+.- ..-+++++.-++.
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 9999999998776665421 1235666655443
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=88.64 E-value=2 Score=35.64 Aligned_cols=39 Identities=18% Similarity=0.081 Sum_probs=26.0
Q ss_pred CccEEEEEechHHHHHHHHH----hhCccccceeeeecccCCC
Q 020621 92 EEQAFVVGHDWGAQIAWNLC----LFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 92 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~lvl~~~~~~~ 130 (323)
.++++|.|.|.||.-++..+ ...|..++-..+.++....
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 35788999999999887654 4466545545555555443
No 244
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=88.59 E-value=6.5 Score=32.92 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=64.7
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCC---------------------CCCcHHHHHHHH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDP---------------------ESYTIFHLVGDL 83 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~i 83 (323)
|+|+++--+..-...+..+.+.+.+.|..++.+|.-=.|.+....+. ....++.+++-.
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 34455444444456677778888889999999997544444332210 112233444445
Q ss_pred HHHHHHhC----CccEEEEEechHHHHHHHHHhhCccccceeeeec
Q 020621 84 IGLLDELG----EEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 84 ~~~l~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
..++..+. ++-++-+|-|.|..++.......|=-+-+++...
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 55555542 3457788999999999999998886666666544
No 245
>PRK02399 hypothetical protein; Provisional
Probab=87.14 E-value=17 Score=30.59 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=61.1
Q ss_pred EEEcccCCC-chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC---------------------CCCCcHHHHHHHHHH
Q 020621 28 LLIHGFPEL-WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD---------------------PESYTIFHLVGDLIG 85 (323)
Q Consensus 28 v~~hG~~~~-~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~---------------------~~~~~~~~~~~~i~~ 85 (323)
|++=|...+ .+.+..+.+.+.++|..|+.+|.-..|......+ .....++.+.+-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 444455554 4456666677778899999999844442211110 011123444455555
Q ss_pred HHHHh----CCccEEEEEechHHHHHHHHHhhCccccceeeeec
Q 020621 86 LLDEL----GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 86 ~l~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
++..+ .++-++-+|-|.|..++.......|=-+-+++...
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 55543 34467788999999999999998887676666554
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.03 E-value=2 Score=36.65 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=32.5
Q ss_pred HhCCccEEEEEechHHHHHHHHHhh-----CccccceeeeecccCCC
Q 020621 89 ELGEEQAFVVGHDWGAQIAWNLCLF-----RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 89 ~~~~~~~~lvG~S~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~ 130 (323)
..|.+|+.|||+|+|+.+....... .-+.|..+++++.|...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 3478899999999999998866642 22468999999977654
No 247
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.91 E-value=1.3 Score=38.52 Aligned_cols=53 Identities=25% Similarity=0.441 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHHHHh--C-CccEEEEEechHHHHHHHHHhh-----Ccc------ccceeeeeccc
Q 020621 75 TIFHLVGDLIGLLDEL--G-EEQAFVVGHDWGAQIAWNLCLF-----RPD------RVKALVNLGVA 127 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~--~-~~~~~lvG~S~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~ 127 (323)
++..-...+.+.+... | .++++.+||||||.++=.+... .|+ ..+++|.++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3333344444444443 3 4578899999999888655533 232 35677777755
No 248
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=83.15 E-value=7.2 Score=29.39 Aligned_cols=69 Identities=10% Similarity=0.154 Sum_probs=47.8
Q ss_pred hhhhcCc-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEech----HHHHHHHHHhhCc-cccc
Q 020621 46 HLAEHGY-HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDW----GAQIAWNLCLFRP-DRVK 119 (323)
Q Consensus 46 ~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~----Gg~~a~~~a~~~p-~~v~ 119 (323)
.+...|. +|+..|.++. ..++.+.+++.+.++++..+ -.++|+|+|. |..++.++|.+.. ..+.
T Consensus 71 ~l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvs 140 (202)
T cd01714 71 EALAMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQIT 140 (202)
T ss_pred HHHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccc
Confidence 3444454 5666665422 35678889999999998877 5788999998 8889998888753 2455
Q ss_pred eeeee
Q 020621 120 ALVNL 124 (323)
Q Consensus 120 ~lvl~ 124 (323)
.++.+
T Consensus 141 dv~~l 145 (202)
T cd01714 141 YVSKI 145 (202)
T ss_pred eEEEE
Confidence 55544
No 249
>PRK12467 peptide synthase; Provisional
Probab=83.00 E-value=5.9 Score=44.35 Aligned_cols=96 Identities=11% Similarity=0.004 Sum_probs=67.6
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC-CccEEEEEechH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG-EEQAFVVGHDWG 103 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~-~~~~~lvG~S~G 103 (323)
+.+++.|...++...+.++...|... ..++.+..++.-.... ...++++++....+.+.... ..+..+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 46999999998888888887777664 7888887765533222 23466777777777776654 347899999999
Q ss_pred HHHHHHHHhh---Cccccceeeeec
Q 020621 104 AQIAWNLCLF---RPDRVKALVNLG 125 (323)
Q Consensus 104 g~~a~~~a~~---~p~~v~~lvl~~ 125 (323)
|.++..++.. ..+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999888764 334455555554
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=78.75 E-value=1.9 Score=35.25 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=24.9
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+.++++..|.++-.++|||+|=..|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4456677788999999999999988877643
No 251
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=78.42 E-value=3 Score=33.64 Aligned_cols=31 Identities=29% Similarity=0.276 Sum_probs=25.0
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+.++++..|+++-.++|||+|-..|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3355677789999999999999998877754
No 252
>PRK10279 hypothetical protein; Provisional
Probab=77.98 E-value=3.7 Score=33.14 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=26.7
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 116 (323)
+.+.+++.++..-.++|.|+|+.++..+|....+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 4455566777777899999999999999976543
No 253
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=77.96 E-value=6.4 Score=28.75 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=40.7
Q ss_pred CCCCeEEEEcccCCCchhH--HHHHHhhhhcCcEEEeeCCCC--CCCCCCCCCCCCCcHHHHHHHHHHH
Q 020621 22 GQGPLVLLIHGFPELWSCW--KYQINHLAEHGYHVVAPDMRG--YGDSDSPQDPESYTIFHLVGDLIGL 86 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~--~~~~~~l~~~G~~vi~~d~~G--~G~s~~~~~~~~~~~~~~~~~i~~~ 86 (323)
++.+.+|++-|+.++..+- ..+.+.|.+.|++++..|--+ ||.+.. -.++-++-.+.+..+
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniRRv 84 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIRRV 84 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHHHH
Confidence 4568999999999886553 344578888999999998543 454432 344555555555443
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=77.78 E-value=4 Score=33.05 Aligned_cols=33 Identities=30% Similarity=0.242 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 82 DLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 82 ~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
-+.+.+++.++..-.++|.|+|+.++..++...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 345566666877778889999999999999874
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=77.75 E-value=4.6 Score=29.47 Aligned_cols=33 Identities=27% Similarity=0.199 Sum_probs=25.5
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+.+.+.+.+...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455557777789999999999999998654
No 256
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=77.21 E-value=25 Score=28.09 Aligned_cols=90 Identities=13% Similarity=0.153 Sum_probs=48.5
Q ss_pred CeEEEEcccCCCchh------HHHHHHhh-hhcCcEEEeeCCCCCCCC--------CCC-----CCCCCCcHHHHHHHHH
Q 020621 25 PLVLLIHGFPELWSC------WKYQINHL-AEHGYHVVAPDMRGYGDS--------DSP-----QDPESYTIFHLVGDLI 84 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~------~~~~~~~l-~~~G~~vi~~d~~G~G~s--------~~~-----~~~~~~~~~~~~~~i~ 84 (323)
..+||+=|.+.+... -..+.+.+ ...+-..+++=.+|.|.. ... .......+++-+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 356777776644321 23444555 222324444455677761 110 0111234455444433
Q ss_pred HHH-HHh-CCccEEEEEechHHHHHHHHHhhC
Q 020621 85 GLL-DEL-GEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 85 ~~l-~~~-~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
..+ +.. ..+++.++|+|-|+..|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 333 433 345799999999999999988653
No 257
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=76.78 E-value=4.8 Score=30.02 Aligned_cols=31 Identities=32% Similarity=0.207 Sum_probs=23.6
Q ss_pred HHHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 84 IGLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 84 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
.+.+++.+...-.++|-|.||.+|..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344445666678899999999999999754
No 258
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=76.60 E-value=14 Score=27.89 Aligned_cols=37 Identities=16% Similarity=0.079 Sum_probs=27.6
Q ss_pred CCCeEEEEcccCCCchh--H-HHHHHhhhhcCcEEEeeCC
Q 020621 23 QGPLVLLIHGFPELWSC--W-KYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~--~-~~~~~~l~~~G~~vi~~d~ 59 (323)
.++.|.|||-.+.+... | ......|.+.|+.+..+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 46799999988876554 3 3445678888998888876
No 259
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=76.32 E-value=3.8 Score=33.04 Aligned_cols=31 Identities=19% Similarity=-0.025 Sum_probs=24.7
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
+.++++..+.++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3455666788899999999999888887754
No 260
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=75.65 E-value=5.3 Score=31.51 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhCCc---cEEEEEechHHHHHHHHHhh---CccccceeeeecccCCC
Q 020621 78 HLVGDLIGLLDELGEE---QAFVVGHDWGAQIAWNLCLF---RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~---~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~~ 130 (323)
.+.+.+.+.++.+..+ +++|.|.|+|+.-+...-.. .-+++.+.+..+|+...
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 3344444444555322 79999999998766543322 33579999999987654
No 261
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=75.05 E-value=38 Score=28.80 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=42.7
Q ss_pred CCeEEEEcccCCC---chhHHHHHHhhhhcCcEEEeeCCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHHH--hCCccE
Q 020621 24 GPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGY---GDSDSPQDPESYTIFHLVGDLIGLLDE--LGEEQA 95 (323)
Q Consensus 24 ~~~lv~~hG~~~~---~~~~~~~~~~l~~~G~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~~i~~~l~~--~~~~~~ 95 (323)
+.++|+++.+... .......+..|.+.|+.|+-+. +|. |.... ..-.++++++..+...+.. +..+++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~---gr~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP---GRMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC---CCCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 3578888855322 1223455678888899888665 343 33322 1345777777777777643 333455
Q ss_pred EEEEe
Q 020621 96 FVVGH 100 (323)
Q Consensus 96 ~lvG~ 100 (323)
.+.|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 55565
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=74.12 E-value=6.7 Score=30.06 Aligned_cols=31 Identities=23% Similarity=0.155 Sum_probs=23.3
Q ss_pred HHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 85 GLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 85 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+.+.+.+.+.-.++|.|.|+.+|..+|...+
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3344446666679999999999999997543
No 263
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=73.91 E-value=5.7 Score=31.48 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=25.2
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
+.+.+++.++..-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555666776667889999999999999864
No 264
>COG3933 Transcriptional antiterminator [Transcription]
Probab=72.71 E-value=28 Score=29.61 Aligned_cols=72 Identities=17% Similarity=0.209 Sum_probs=56.5
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGA 104 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg 104 (323)
..+|+.||....+ +....+..|.+. =-+.++|+| -..++.+..+.+.+.+++.+..+=.++=..||+
T Consensus 110 ~vIiiAHG~sTAS-SmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTAS-SMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHH-HHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 4789999987654 455666666665 468999997 678999999999999999988776677778998
Q ss_pred HHHHH
Q 020621 105 QIAWN 109 (323)
Q Consensus 105 ~~a~~ 109 (323)
.....
T Consensus 177 L~~f~ 181 (470)
T COG3933 177 LTSFG 181 (470)
T ss_pred HHHHH
Confidence 76654
No 265
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=72.41 E-value=50 Score=28.02 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=42.4
Q ss_pred CeEEEEcccCCC---chhHHHHHHhhhhcCcEEEeeCCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCccE
Q 020621 25 PLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRGY---GDSDSPQDPESYTIFHLVGDLIGLLDE---LGEEQA 95 (323)
Q Consensus 25 ~~lv~~hG~~~~---~~~~~~~~~~l~~~G~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~ 95 (323)
.++|+++.+... .......+..|.+.|+.|+-+. +|+ |.... ....+++++++.+...+.. +..+++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~---g~~~~~~~i~~~v~~~~~~~~~~~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGK---GRLAEPETIVKAAEREFSPKEDLEGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccC---CCCCCHHHHHHHHHHHHhhccccCCceE
Confidence 467777764322 2234555678888888776665 332 33321 1345777888888777744 444556
Q ss_pred EEEEe
Q 020621 96 FVVGH 100 (323)
Q Consensus 96 ~lvG~ 100 (323)
.+.|-
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 55555
No 266
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=72.40 E-value=6.1 Score=32.08 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=26.1
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
+.+.|+..+...-++.|.|+|+.++..+|...
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 45566666777889999999999999999854
No 267
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=72.01 E-value=5.1 Score=32.11 Aligned_cols=31 Identities=26% Similarity=0.178 Sum_probs=24.1
Q ss_pred HHHHHHhC-CccEEEEEechHHHHHHHHHhhC
Q 020621 84 IGLLDELG-EEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 84 ~~~l~~~~-~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
.+.+...+ +++..++|||+|=+.|+.++...
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455566 88999999999999888877543
No 268
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=71.58 E-value=3.6 Score=35.01 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=27.8
Q ss_pred HHHHHHhCCccEEEEEechHHHHHHHHHhhCcccccee
Q 020621 84 IGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKAL 121 (323)
Q Consensus 84 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 121 (323)
.+.+...++.+-++.|.|.|+.+|..++...++.+..+
T Consensus 92 LkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 92 LKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33444446667789999999999999998776654443
No 269
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=70.85 E-value=8.4 Score=28.20 Aligned_cols=31 Identities=23% Similarity=0.182 Sum_probs=23.3
Q ss_pred HHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 85 GLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 85 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+.+++.+...-.++|.|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3334456656678899999999999998654
No 270
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=70.82 E-value=36 Score=28.40 Aligned_cols=85 Identities=19% Similarity=0.170 Sum_probs=61.3
Q ss_pred CeEEEEcccCCC-------chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEE
Q 020621 25 PLVLLIHGFPEL-------WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFV 97 (323)
Q Consensus 25 ~~lv~~hG~~~~-------~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~l 97 (323)
..||++||-+.+ .+.|..+++.+.++| -+-.+|...+|.-++ +++.+..+..++... +-.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~~---~~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEVG---PELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHhC---CcEE
Confidence 479999986644 567999999999986 477789887776542 445566666666543 3388
Q ss_pred EEechHHHHHHHHHhhCccccceeeeecc
Q 020621 98 VGHDWGAQIAWNLCLFRPDRVKALVNLGV 126 (323)
Q Consensus 98 vG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 126 (323)
|..|+.=..++ |.+||-++.+++.
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeC
Confidence 89988766654 4688999888864
No 271
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.46 E-value=8.2 Score=29.43 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=25.4
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+.+.+.+.+...-.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455556666678899999999999998775
No 272
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=69.96 E-value=30 Score=23.18 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=46.9
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC-CccEEEEEechH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELG-EEQAFVVGHDWG 103 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~-~~~~~lvG~S~G 103 (323)
.||.-|| .-+......++.+... --.+.++++. ...+.+++.+.+.+.++.+. .+.+.++.-=.|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4777899 4444555666665544 2356666654 45688899999999998886 445656555556
Q ss_pred HHHHHHHH
Q 020621 104 AQIAWNLC 111 (323)
Q Consensus 104 g~~a~~~a 111 (323)
|.....++
T Consensus 69 gsp~n~a~ 76 (116)
T PF03610_consen 69 GSPFNEAA 76 (116)
T ss_dssp SHHHHHHH
T ss_pred CccchHHH
Confidence 55444443
No 273
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=69.40 E-value=30 Score=23.76 Aligned_cols=56 Identities=18% Similarity=0.282 Sum_probs=32.8
Q ss_pred CCCeEEEEcccCCCchhHH--HHHHhhhhcCcE-------EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWK--YQINHLAEHGYH-------VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE 89 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~--~~~~~l~~~G~~-------vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 89 (323)
++|.|+-+||+.|.+-.|. -+++.|-..|.. +...|+| ....++++-+++...|..
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP-----------~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP-----------HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC-----------CchHHHHHHHHHHHHHHH
Confidence 5678888999999987763 334554443321 2223333 234566666676666653
No 274
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=67.49 E-value=5.3 Score=33.48 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=28.4
Q ss_pred HHHHHhCCccEEEEEechHHHHHHHHHhhCccccceee
Q 020621 85 GLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122 (323)
Q Consensus 85 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 122 (323)
+.+...++.+-++.|-|.|+.+|..+|...++.+..++
T Consensus 103 kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 103 KALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 34444566677899999999999999997665555444
No 275
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=67.30 E-value=44 Score=26.79 Aligned_cols=57 Identities=19% Similarity=0.271 Sum_probs=29.6
Q ss_pred HHHHhhhhcCcE--EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHH
Q 020621 42 YQINHLAEHGYH--VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIA 107 (323)
Q Consensus 42 ~~~~~l~~~G~~--vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a 107 (323)
..++.+.+.|.. =|.+| ||.|.+.... .--++...+..+ +. ....+++|+|-=..+.
T Consensus 167 ~~i~~a~~~GI~~~~IilD-PGiGF~k~~~-----~n~~ll~~l~~l-~~--lg~Pilvg~SRKsfig 225 (282)
T PRK11613 167 EQIARCEAAGIAKEKLLLD-PGFGFGKNLS-----HNYQLLARLAEF-HH--FNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHcCCChhhEEEe-CCCCcCCCHH-----HHHHHHHHHHHH-Hh--CCCCEEEEecccHHHH
Confidence 334556666875 77888 5777542111 111122222222 22 3456799999655554
No 276
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=67.05 E-value=5.4 Score=32.24 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=28.2
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceee
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 122 (323)
+.+.+...+..+-++.|-|.|+.+|..++...++.+..++
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444567777899999999999999986555444433
No 277
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=67.05 E-value=12 Score=27.25 Aligned_cols=30 Identities=23% Similarity=0.124 Sum_probs=22.4
Q ss_pred HHHHHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 85 GLLDELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 85 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
+.++..+...-.++|.|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444555667889999999999998654
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=67.00 E-value=5.2 Score=33.90 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=29.2
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceee
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 122 (323)
+.+.+...+..+-++.|.|.|+.+|..++...++.+..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3334444466677899999999999999997766665543
No 279
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=66.49 E-value=23 Score=27.45 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=27.0
Q ss_pred CCCeEEEEcccCC--CchhH-HHHHHhhhhcCcEEEeeCCC
Q 020621 23 QGPLVLLIHGFPE--LWSCW-KYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 23 ~~~~lv~~hG~~~--~~~~~-~~~~~~l~~~G~~vi~~d~~ 60 (323)
.+|.|+||+-... ....| ......+.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4688999998773 33444 33456777889999888865
No 280
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=62.03 E-value=54 Score=24.88 Aligned_cols=58 Identities=28% Similarity=0.435 Sum_probs=32.7
Q ss_pred eEEEEcccCCCchh-HHHHHHhhhhcCc-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE
Q 020621 26 LVLLIHGFPELWSC-WKYQINHLAEHGY-HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 26 ~lv~~hG~~~~~~~-~~~~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv 98 (323)
+|++.||...++.. |..+-..|.+.|| .|++...-|+- .++++.+-++.-+.+.+.|+
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCCceEEEe
Confidence 67777887766544 3444445666677 55555442221 24566666666666665554
No 281
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=61.98 E-value=57 Score=24.51 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=47.6
Q ss_pred HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--cc
Q 020621 41 KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RV 118 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v 118 (323)
....+.+.++++.++.+|-+|.... -.+..+.+..+++......++|+--+..+.-.+..+..+-+ .+
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~~----------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~ 142 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSPR----------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGI 142 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSST----------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSST
T ss_pred HHHHHHHhhcCCCEEEEecCCcchh----------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccC
Confidence 3445556666799999999865522 24567778888888777777777666656555554444322 46
Q ss_pred ceeeee
Q 020621 119 KALVNL 124 (323)
Q Consensus 119 ~~lvl~ 124 (323)
.++|+-
T Consensus 143 ~~lIlT 148 (196)
T PF00448_consen 143 DGLILT 148 (196)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 777754
No 282
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=61.69 E-value=4.2 Score=29.13 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=28.5
Q ss_pred eCCCCCCCCCCC-CCCCCCcHHHHHHHH----HHHHHHh----CCccEEEEEechHHH
Q 020621 57 PDMRGYGDSDSP-QDPESYTIFHLVGDL----IGLLDEL----GEEQAFVVGHDWGAQ 105 (323)
Q Consensus 57 ~d~~G~G~s~~~-~~~~~~~~~~~~~~i----~~~l~~~----~~~~~~lvG~S~Gg~ 105 (323)
+-+-|||..... .....++..+++.-+ ..+-+.. ..++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 444588877221 123567888888888 4444443 345899999999887
No 283
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=60.85 E-value=7.8 Score=28.82 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=23.4
Q ss_pred eEEEEccc---CCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 26 LVLLIHGF---PELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 26 ~lv~~hG~---~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
.||++|.. ..+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 58888942 2234456677888888999988764
No 284
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.57 E-value=16 Score=28.95 Aligned_cols=32 Identities=22% Similarity=0.074 Sum_probs=23.3
Q ss_pred HHHHHhCCc-cEEEEEechHHHHHHHHHhhCcc
Q 020621 85 GLLDELGEE-QAFVVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 85 ~~l~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~ 116 (323)
+.+.+.+.. .-.++|.|.|+.++..+++..+.
T Consensus 18 ~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 18 DAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 334444555 44788999999999999887654
No 285
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=60.40 E-value=11 Score=29.96 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=26.8
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
..||++|-...+......+++.|.++||++++++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3678889766666677788889999999988774
No 286
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=59.11 E-value=13 Score=32.92 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=25.4
Q ss_pred HHHH-HHhCCccEEEEEechHHHHHHHHHhhC
Q 020621 84 IGLL-DELGEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 84 ~~~l-~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
.+++ +..|+++-.++|||+|=..|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3455 477899999999999999999888655
No 287
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=58.95 E-value=52 Score=27.80 Aligned_cols=100 Identities=17% Similarity=0.103 Sum_probs=58.7
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCC----CCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD----SPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~----~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
+++++--..+..+.-....+.+.+.|+-|+-.|+.++=.-- .....-...++.+.+++......-.....+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 44444433333333345567777778999999988763322 11111123444555554444433333456788999
Q ss_pred hHHHHHHHHHhhCcc-ccceeeeec
Q 020621 102 WGAQIAWNLCLFRPD-RVKALVNLG 125 (323)
Q Consensus 102 ~Gg~~a~~~a~~~p~-~v~~lvl~~ 125 (323)
-||.++...++..|. .+.+.+.+.
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCC
Confidence 999999999988775 455555444
No 288
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=58.57 E-value=74 Score=23.66 Aligned_cols=91 Identities=12% Similarity=-0.074 Sum_probs=55.6
Q ss_pred eEEEECCeeEEEeecC----CCCe--EEEEcccCCCchhHHHHHHhhhhcCcEE------EeeCCCCCCCCCCCCCCCCC
Q 020621 7 RRVHTNGIWMHIAEKG----QGPL--VLLIHGFPELWSCWKYQINHLAEHGYHV------VAPDMRGYGDSDSPQDPESY 74 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g----~~~~--lv~~hG~~~~~~~~~~~~~~l~~~G~~v------i~~d~~G~G~s~~~~~~~~~ 74 (323)
..+.++|..+.|..+. .|.+ |-++-|++...+.-.+++..|.++|+.+ +.++.. .
T Consensus 38 ge~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-------------d 104 (184)
T TIGR01626 38 GEIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-------------D 104 (184)
T ss_pred ceEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-------------c
Confidence 3455677888898876 3544 4445577878888899999999888888 777631 1
Q ss_pred cHHHHHHHHHHHHHHhCCc-cEEEEEechHHHHHHHH
Q 020621 75 TIFHLVGDLIGLLDELGEE-QAFVVGHDWGAQIAWNL 110 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~~~~-~~~lvG~S~Gg~~a~~~ 110 (323)
........+..+++..+.+ ++..+...-.|.++..+
T Consensus 105 ~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~ 141 (184)
T TIGR01626 105 AIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAW 141 (184)
T ss_pred chhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhc
Confidence 2223344566666666543 32233333345444443
No 289
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=58.53 E-value=38 Score=27.54 Aligned_cols=88 Identities=11% Similarity=0.080 Sum_probs=52.6
Q ss_pred hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH--HHHHHHHHhhCcc
Q 020621 39 CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG--AQIAWNLCLFRPD 116 (323)
Q Consensus 39 ~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G--g~~a~~~a~~~p~ 116 (323)
.|..+.+.+..+++.-.-+=++.+|...... ....-..-...+..++......+++|+|-|-= =.+=.+++..+|+
T Consensus 226 ~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i--~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~ 303 (373)
T COG4850 226 LFPTLQEFITNRNFPYGPLLLRRWGGVLDNI--IESGAARKGQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPN 303 (373)
T ss_pred hHHHHHHHHhcCCCCCCchhHhhcCCccccc--ccchhhhcccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCcc
Confidence 3455556666665554444444444321111 11122223445566777888889999998842 2344567788999
Q ss_pred ccceeeeecccC
Q 020621 117 RVKALVNLGVAY 128 (323)
Q Consensus 117 ~v~~lvl~~~~~ 128 (323)
+|.++..=+...
T Consensus 304 RIl~I~IRdvs~ 315 (373)
T COG4850 304 RILGIYIRDVSG 315 (373)
T ss_pred ceeeEeeeeccC
Confidence 999998877553
No 290
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=57.72 E-value=13 Score=28.55 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=26.2
Q ss_pred CeEEEEccc-CCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 25 PLVLLIHGF-PELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 25 ~~lv~~hG~-~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 368888974 3455667788899999999988874
No 291
>PHA02114 hypothetical protein
Probab=57.14 E-value=18 Score=23.19 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=27.5
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
+||+=-.+..+..-|-..+..|.+.||+|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 677766777888889999999999999998754
No 292
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=56.60 E-value=25 Score=25.22 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=26.2
Q ss_pred CeEEEEcccCCCchhH--HHHHHhhhhcCcEEEeeCCC
Q 020621 25 PLVLLIHGFPELWSCW--KYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~--~~~~~~l~~~G~~vi~~d~~ 60 (323)
+.+||+-|..++.-+- ..+.+.|.+.|+.++.+|-.
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 6799999999886542 34457788889999999753
No 293
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=56.27 E-value=24 Score=28.85 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.2
Q ss_pred EEEEechHHHHHHHHHhhC
Q 020621 96 FVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~ 114 (323)
.+.|.|+||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4669999999999999754
No 294
>PRK14974 cell division protein FtsY; Provisional
Probab=55.73 E-value=95 Score=25.76 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=43.6
Q ss_pred hhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCc--cccceeeee
Q 020621 48 AEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP--DRVKALVNL 124 (323)
Q Consensus 48 ~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~ 124 (323)
...|+.++.+|-+|.... -.++.+.+..+.+......+++|.-+.-|.-+...+..+. -.+.++|+-
T Consensus 219 ~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 345788999998865542 2345666677776666667778877777776666665543 246666654
No 295
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=55.35 E-value=14 Score=32.65 Aligned_cols=37 Identities=8% Similarity=-0.085 Sum_probs=28.5
Q ss_pred EEEEEechHHHHHHHHHhhCcc-ccceeeeecccCCCC
Q 020621 95 AFVVGHDWGAQIAWNLCLFRPD-RVKALVNLGVAYMPR 131 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~ 131 (323)
++-.+.|=||..++..|....+ .|++++...|.....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 3445899999999999987654 799999888766543
No 296
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=54.93 E-value=36 Score=26.21 Aligned_cols=48 Identities=15% Similarity=0.219 Sum_probs=28.3
Q ss_pred HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE
Q 020621 40 WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 40 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv 98 (323)
.+.+++.|.++|+.|..+.+. ...+..++.+.+.++++..+.+++.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~-----------~~~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELD-----------DPENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCC-----------CccccccHHHHHHHHHHHcCCCEEEEE
Confidence 456678889999999999875 122333567778888888888877765
No 297
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=54.41 E-value=24 Score=21.62 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=17.9
Q ss_pred CCccEEEEEechHHHHHHHHHhhC
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~ 114 (323)
+.+++-++|-|-|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 556788889999999998777665
No 298
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=54.04 E-value=39 Score=26.99 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=44.9
Q ss_pred eEEEEcccCCCchhHH-HHHHhhhhcCc-------EEEeeCCCCCCCCCCCCCCCCCcHHHHH--------HHHHHHHHH
Q 020621 26 LVLLIHGFPELWSCWK-YQINHLAEHGY-------HVVAPDMRGYGDSDSPQDPESYTIFHLV--------GDLIGLLDE 89 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~-~~~~~l~~~G~-------~vi~~d~~G~G~s~~~~~~~~~~~~~~~--------~~i~~~l~~ 89 (323)
.-|++.|.|...-.-. .+...+.+.|. +++.+|..|.=..+... -......++ .++.++++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHh
Confidence 3455666665544433 33455555566 89999999854333221 011111122 245666655
Q ss_pred hCCccEEEEEech-HHHHHHHHH
Q 020621 90 LGEEQAFVVGHDW-GAQIAWNLC 111 (323)
Q Consensus 90 ~~~~~~~lvG~S~-Gg~~a~~~a 111 (323)
+ ++-+|+|.|- ||.+.-.+.
T Consensus 104 v--~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 104 V--KPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred c--CCCEEEEeCCCCCCCCHHHH
Confidence 4 4679999995 675544433
No 299
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=53.37 E-value=79 Score=27.11 Aligned_cols=70 Identities=19% Similarity=0.153 Sum_probs=50.6
Q ss_pred hhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--ccceeee
Q 020621 46 HLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALVN 123 (323)
Q Consensus 46 ~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl 123 (323)
.+.+.+|.|+.+|-.|.- .--+++.+.+.++-+.+....+.+|--||=|.-|...|..+.+ .+.++|+
T Consensus 177 ~ak~~~~DvvIvDTAGRl----------~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL----------HIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCCcc----------cccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 334445666666655322 1234677888888888888899999999999999999988766 3677776
Q ss_pred ec
Q 020621 124 LG 125 (323)
Q Consensus 124 ~~ 125 (323)
--
T Consensus 247 TK 248 (451)
T COG0541 247 TK 248 (451)
T ss_pred Ec
Confidence 53
No 300
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.06 E-value=27 Score=27.09 Aligned_cols=32 Identities=22% Similarity=0.052 Sum_probs=23.0
Q ss_pred HHHHHHhCCc--cEEEEEechHHHHHHHHHhhCc
Q 020621 84 IGLLDELGEE--QAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 84 ~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
.+.+.+.++. .-.++|-|.|+.++..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3344444554 3478999999999999998754
No 301
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=52.05 E-value=24 Score=28.49 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=23.1
Q ss_pred HhCCccEEEEEechHHHHHHHHHhhCcccc
Q 020621 89 ELGEEQAFVVGHDWGAQIAWNLCLFRPDRV 118 (323)
Q Consensus 89 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 118 (323)
..+..+-++.|.|.|+.+|..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345566789999999999999998654444
No 302
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=51.77 E-value=65 Score=23.51 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=37.1
Q ss_pred hhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 47 LAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 47 l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
|.+.|++.+.+|.-++=...... .-..++.+.+.++.+..+.+++.++--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~----~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYED----EIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcC----cCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 88889999999997664333222 223456666666666666668999999986
No 303
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=51.54 E-value=77 Score=24.13 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred CCCeEEEEcccCCCchhH-HHHHHhhhhc-CcEEEeeCCCCCCCCCCCC---C------CCCCcHHHHHHH-----HHHH
Q 020621 23 QGPLVLLIHGFPELWSCW-KYQINHLAEH-GYHVVAPDMRGYGDSDSPQ---D------PESYTIFHLVGD-----LIGL 86 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~-~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~---~------~~~~~~~~~~~~-----i~~~ 86 (323)
..+.|++++-.......| ..+...|.+. |+.+..++... ...... . +.. +...+.+. +.++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG-~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGG-NTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCc-hHHHHHHHHHHcCHHHH
Confidence 457899999877754443 4455778888 89988887644 111000 0 011 22222222 2333
Q ss_pred HHHhCCccEEEEEechHHHHHHH
Q 020621 87 LDELGEEQAFVVGHDWGAQIAWN 109 (323)
Q Consensus 87 l~~~~~~~~~lvG~S~Gg~~a~~ 109 (323)
++..-.+...++|.|.|+++...
T Consensus 107 l~~~~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAALERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHCCCEEEEECHhHHhhCC
Confidence 43332245789999999888665
No 304
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=51.24 E-value=19 Score=27.59 Aligned_cols=30 Identities=30% Similarity=0.369 Sum_probs=23.8
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
+.=||++|-|.+.+ +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 45688898887765 4568888999999997
No 305
>PLN03019 carbonic anhydrase
Probab=50.66 E-value=24 Score=28.76 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHHHH
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNL 110 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~ 110 (323)
.....|...+.+++.+.|+++|||--|.+...+
T Consensus 200 ~v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 345778888999999999999999866665544
No 306
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=50.03 E-value=56 Score=26.59 Aligned_cols=17 Identities=35% Similarity=0.563 Sum_probs=15.0
Q ss_pred EEEEechHHHHHHHHHh
Q 020621 96 FVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~ 112 (323)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 46799999999999886
No 307
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=49.14 E-value=1.6e+02 Score=25.56 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=45.7
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--ccceee
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALV 122 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lv 122 (323)
..+...+|.++.+|-+|.-.. -+.+.+.+..+.+......++||--++-|.-+...+..+.+ .+.++|
T Consensus 176 ~~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~I 245 (429)
T TIGR01425 176 EKFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVI 245 (429)
T ss_pred HHHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEE
Confidence 444455799999999974321 13455666666666666678888778777777766666533 356666
Q ss_pred ee
Q 020621 123 NL 124 (323)
Q Consensus 123 l~ 124 (323)
+-
T Consensus 246 lT 247 (429)
T TIGR01425 246 IT 247 (429)
T ss_pred EE
Confidence 54
No 308
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=49.05 E-value=0.87 Score=36.37 Aligned_cols=91 Identities=26% Similarity=0.262 Sum_probs=56.1
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC--------CCCCc--------HHHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD--------PESYT--------IFHLVGDLIGL 86 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~--------~~~~~--------~~~~~~~i~~~ 86 (323)
+-|.+++.||++.....-......+.+.++.++..+...+|.+..... ..... ..-...+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 578999999999988876668888888889888777533333221110 00111 01111111111
Q ss_pred HHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 87 LDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 87 l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
.. ...+....|+++|+..+..++...+
T Consensus 128 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GA--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hh--hcCcceEEEEEeeccchHHHhhcch
Confidence 11 1257889999999998888888776
No 309
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.88 E-value=79 Score=27.54 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=56.4
Q ss_pred EEcccCCCchhHHHH-HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHH
Q 020621 29 LIHGFPELWSCWKYQ-INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIA 107 (323)
Q Consensus 29 ~~hG~~~~~~~~~~~-~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a 107 (323)
|--|+|.+...-... +++-..+||.|+.+|-.|.-.. -..+...+..+++.-..+.|..||.-+=|.=+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~----------~~~lm~~l~k~~~~~~pd~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN----------NAPLMTSLAKLIKVNKPDLILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC----------ChhHHHHHHHHHhcCCCceEEEehhhhhCcHH
Confidence 445666665444333 4555667999999998764322 23456778888888788889999998877766
Q ss_pred HHHHhh---------Cccccceeeee
Q 020621 108 WNLCLF---------RPDRVKALVNL 124 (323)
Q Consensus 108 ~~~a~~---------~p~~v~~lvl~ 124 (323)
..-+.. .|..++++++-
T Consensus 513 v~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 513 VDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHhcCCCccccceEEEE
Confidence 644433 23356666654
No 310
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=48.75 E-value=1.6e+02 Score=24.50 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=13.5
Q ss_pred chHHHHHHHHHHhhhc
Q 020621 301 KAEQITEEILSHFRKK 316 (323)
Q Consensus 301 ~~~~~~~~i~~fl~~~ 316 (323)
.|++|.+.+.+.|...
T Consensus 331 ~~~~V~~~~~~ll~~~ 346 (348)
T PRK10916 331 TPQRVLEELNALLLQE 346 (348)
T ss_pred CHHHHHHHHHHHhhcc
Confidence 5899999999988763
No 311
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=48.68 E-value=75 Score=22.95 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHh--CCccEEEEEechHHHHHHHHHhhCccccceeeeecc
Q 020621 78 HLVGDLIGLLDEL--GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGV 126 (323)
Q Consensus 78 ~~~~~i~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 126 (323)
+.-+.+.++++.+ ..++++++|-|..|..-+.++...++.|..++=.+|
T Consensus 52 ~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 52 QSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3344444555433 346899999999999999888877777777776654
No 312
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=47.85 E-value=49 Score=24.93 Aligned_cols=61 Identities=23% Similarity=0.184 Sum_probs=36.4
Q ss_pred CCCeEEEEcccCCCc---hhHHHHHHhhhhcCcEEEeeCCC--CCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPELW---SCWKYQINHLAEHGYHVVAPDMR--GYGDSDSPQDPESYTIFHLVGDLIGLLDE 89 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~---~~~~~~~~~l~~~G~~vi~~d~~--G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 89 (323)
..+|++++||..... ..-..+...|.+.|..+...-++ |||... .....+..+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~------~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN------PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS------HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC------chhHHHHHHHHHHHHHH
Confidence 358999999987542 33345667888877665555555 454332 12333555666666653
No 313
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=47.68 E-value=1.1e+02 Score=23.15 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=19.4
Q ss_pred chhHHHHHHhhhhcCcEEEeeCCC
Q 020621 37 WSCWKYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 37 ~~~~~~~~~~l~~~G~~vi~~d~~ 60 (323)
+..=+.+...|++.|++|++.|+.
T Consensus 24 sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 24 SGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred chHHHHHHHHHHhcCcEEEEeecc
Confidence 334467788999999999999885
No 314
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=47.53 E-value=36 Score=29.33 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=24.6
Q ss_pred ccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch
Q 020621 250 CVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL 299 (323)
Q Consensus 250 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 299 (323)
...|++++|+.|+....... .........++++|++|..-+
T Consensus 376 ~tnviFtNG~~DPW~~lgv~---------~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVT---------SDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp --SEEEEEETT-CCGGGS-----------S-SSSSEEEEEETT--TTGGG
T ss_pred CCeEEeeCCCCCCcccccCC---------CCCCCCcccEEECCCeeeccc
Confidence 34899999999998764421 122345667889999998644
No 315
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=47.44 E-value=70 Score=25.61 Aligned_cols=70 Identities=23% Similarity=0.399 Sum_probs=43.6
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCC--------CCCCC---CCCCC--CCCcHHHHHHHHHHHHHHhC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG--------YGDSD---SPQDP--ESYTIFHLVGDLIGLLDELG 91 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G--------~G~s~---~~~~~--~~~~~~~~~~~i~~~l~~~~ 91 (323)
|-++|.-|.++ ..+.|+..||.|+..|+-= .|..- +.-++ ---+.+.+.+.+++.++..|
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 67888877653 3678888999999999831 12110 00010 11255667777888888888
Q ss_pred CccEEE-EEec
Q 020621 92 EEQAFV-VGHD 101 (323)
Q Consensus 92 ~~~~~l-vG~S 101 (323)
.++.++ +||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 665443 5774
No 316
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=47.03 E-value=56 Score=25.33 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHHhCCc----cEEEE---EechHHHHH-HHHHhhCccccceeeeecccC
Q 020621 75 TIFHLVGDLIGLLDELGEE----QAFVV---GHDWGAQIA-WNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~~~~----~~~lv---G~S~Gg~~a-~~~a~~~p~~v~~lvl~~~~~ 128 (323)
+..++-.++..++...+.+ +.++. |.++-|..| ..++.-.|..|+++.+++|.-
T Consensus 18 ~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSH 79 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSH 79 (296)
T ss_pred CHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcc
Confidence 6678888999999887544 45553 899966554 566777888999999999864
No 317
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=46.80 E-value=76 Score=20.35 Aligned_cols=67 Identities=18% Similarity=0.312 Sum_probs=46.2
Q ss_pred hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE-E--echHHHHHHHHHhhC
Q 020621 38 SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV-G--HDWGAQIAWNLCLFR 114 (323)
Q Consensus 38 ~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv-G--~S~Gg~~a~~~a~~~ 114 (323)
..|......|.+.|+.|+.+-.- ..+ ...+.+++...-...|.. -+.++++ | .|-|+.+=..+|...
T Consensus 16 ~~f~~~a~~L~~~G~~vvnPa~~------~~~--~~~~~~~ym~~~l~~L~~--cD~i~~l~gWe~S~GA~~E~~~A~~l 85 (92)
T PF14359_consen 16 PAFNAAAKRLRAKGYEVVNPAEL------GIP--EGLSWEEYMRICLAMLSD--CDAIYMLPGWENSRGARLEHELAKKL 85 (92)
T ss_pred HHHHHHHHHHHHCCCEEeCchhh------CCC--CCCCHHHHHHHHHHHHHh--CCEEEEcCCcccCcchHHHHHHHHHC
Confidence 34556678899999999988654 111 345677777666666653 4566666 5 799999888888764
No 318
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=46.80 E-value=20 Score=27.60 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=21.8
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCC
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
.=||++|-|.+.+ +..|+++||.|+.+|+
T Consensus 45 ~rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 45 SVCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred CeEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 3567777776544 4468889999999998
No 319
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=46.42 E-value=23 Score=27.29 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=39.3
Q ss_pred CCeEEEEcccCCCch--hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH-HHHHHHHHhC-CccEEEEE
Q 020621 24 GPLVLLIHGFPELWS--CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVG-DLIGLLDELG-EEQAFVVG 99 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~-~i~~~l~~~~-~~~~~lvG 99 (323)
.|+||++.|+.+++- .-..+...|..+|++|.++.-| +-++... -+-.+-.++. ..++.++=
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p--------------t~eE~~~p~lwRfw~~lP~~G~I~if~ 95 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP--------------TDEELRRPFLWRFWRALPARGQIGIFD 95 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS----------------HHHHTS-TTHHHHTTS--TT-EEEEE
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC--------------ChhHcCCCcHHHHHHhCCCCCEEEEEe
Confidence 368999999998754 4567778888889999999765 2222222 2334455553 23677776
Q ss_pred echHH
Q 020621 100 HDWGA 104 (323)
Q Consensus 100 ~S~Gg 104 (323)
-|+=.
T Consensus 96 rSWY~ 100 (228)
T PF03976_consen 96 RSWYE 100 (228)
T ss_dssp S-GGG
T ss_pred cchhh
Confidence 66533
No 320
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=46.34 E-value=72 Score=25.11 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=25.1
Q ss_pred CCCeEEEEcccCCCchh-HHHHHHhhhhcCc-EEEeeCCC
Q 020621 23 QGPLVLLIHGFPELWSC-WKYQINHLAEHGY-HVVAPDMR 60 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~-~~~~~~~l~~~G~-~vi~~d~~ 60 (323)
+.|.|++++-.++.... .....+.|.+.|+ .|-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 56789999976655433 4455567777787 46666664
No 321
>COG3621 Patatin [General function prediction only]
Probab=46.07 E-value=70 Score=26.20 Aligned_cols=51 Identities=16% Similarity=0.320 Sum_probs=33.3
Q ss_pred cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc----cEEEE-EechHHHHHHHHHhhCc
Q 020621 52 YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE----QAFVV-GHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 52 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~----~~~lv-G~S~Gg~~a~~~a~~~p 115 (323)
|++.++|--|.-. .+...+...+++...+ .+.++ |.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGGvrG-------------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGGVRG-------------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCcccc-------------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 8888888543321 3445555666654322 45555 99999999999997543
No 322
>PRK15219 carbonic anhydrase; Provisional
Probab=46.04 E-value=19 Score=28.05 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
+....+...+..++.+.++++|||--|.+...+.
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 3456778888899999999999999777665543
No 323
>PLN00416 carbonate dehydratase
Probab=45.95 E-value=41 Score=26.55 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
....|...+.+++.+.|+++|||--|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 456678888899999999999999777655543
No 324
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=45.29 E-value=56 Score=19.08 Aligned_cols=40 Identities=23% Similarity=0.408 Sum_probs=31.7
Q ss_pred hhcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhcccc
Q 020621 279 KTLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKKSII 319 (323)
Q Consensus 279 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 319 (323)
.+..|+.++..+.| --+..-|.-++|.+.|.+|-++....
T Consensus 22 ie~~PDttItLinG-kkyvVkEsveEVi~kI~~y~rkI~~~ 61 (67)
T COG1582 22 IEAFPDTTITLING-KKYVVKESVEEVINKIIEYRRKIGSL 61 (67)
T ss_pred hhccCCcEEEEEcC-cEEEEcccHHHHHHHHHHHHHHhhee
Confidence 35678888888854 66778889999999999998876543
No 325
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=45.23 E-value=42 Score=26.22 Aligned_cols=20 Identities=20% Similarity=0.027 Sum_probs=17.8
Q ss_pred EEEEechHHHHHHHHHhhCc
Q 020621 96 FVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~p 115 (323)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998754
No 326
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=44.49 E-value=1.2e+02 Score=22.40 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=36.6
Q ss_pred CCeEEEEcccCC---CchhHHHHHHhhhhcCcEEEeeCCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 24 GPLVLLIHGFPE---LWSCWKYQINHLAEHGYHVVAPDMRGY---GDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 24 ~~~lv~~hG~~~---~~~~~~~~~~~l~~~G~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
+.++|+++-+.. ...........|.+.|+.|+-+. +|+ |..... ...+++++++.+...+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHhc
Confidence 467888775322 22234556678888898888776 454 443321 34466777777666553
No 327
>PLN03014 carbonic anhydrase
Probab=44.46 E-value=35 Score=28.06 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNL 110 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~ 110 (323)
....|...+.+++.+.|+++|||--|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 55678888899999999999999866655543
No 328
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=44.29 E-value=1.3e+02 Score=23.58 Aligned_cols=21 Identities=33% Similarity=0.300 Sum_probs=12.8
Q ss_pred HHHHHHhhhhcCcEEEeeCCC
Q 020621 40 WKYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 40 ~~~~~~~l~~~G~~vi~~d~~ 60 (323)
....+..+.+.|..|+.+|..
T Consensus 72 ~~~~i~~~~~~~ipvV~i~~~ 92 (273)
T cd06292 72 DHSHYERLAERGLPVVLVNGR 92 (273)
T ss_pred hhHHHHHHHhCCCCEEEEcCC
Confidence 334455566667777777753
No 329
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=44.23 E-value=69 Score=23.29 Aligned_cols=59 Identities=14% Similarity=0.167 Sum_probs=41.9
Q ss_pred CCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCC-----CCCCcHHHHHHHHHHHHHHhCCc
Q 020621 35 ELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQD-----PESYTIFHLVGDLIGLLDELGEE 93 (323)
Q Consensus 35 ~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~i~~~l~~~~~~ 93 (323)
-+...|+..++.+.+.|++.+++-.-|++....-+. .......+.++.+.+..+..|.+
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 456789999999999999998888777766542221 01224557778888888887775
No 330
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=44.19 E-value=37 Score=26.88 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=43.3
Q ss_pred CCCeEEEEcccCCCc--hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHH-HHHHHHHHhCC-ccEEEE
Q 020621 23 QGPLVLLIHGFPELW--SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVG-DLIGLLDELGE-EQAFVV 98 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~-~i~~~l~~~~~-~~~~lv 98 (323)
..|+||++.|+.+++ ..-..++..|..+|++|.++.-| +-++... -+-.+-.++.. ..+.++
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P--------------t~eE~~~p~lWRfw~~lP~~G~i~IF 119 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP--------------SAEELDHDFLWRIHKALPERGEIGIF 119 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC--------------CHHHHcCchHHHHHHhCCCCCeEEEE
Confidence 348999999998764 45677888999999999999654 1122222 23445555532 367776
Q ss_pred Eech
Q 020621 99 GHDW 102 (323)
Q Consensus 99 G~S~ 102 (323)
=-|+
T Consensus 120 ~RSW 123 (264)
T TIGR03709 120 NRSH 123 (264)
T ss_pred cCcc
Confidence 5555
No 331
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=44.18 E-value=31 Score=25.51 Aligned_cols=33 Identities=21% Similarity=0.122 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
....+...+.+++.+.++++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 456777788899999999999999777766543
No 332
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=43.68 E-value=23 Score=28.71 Aligned_cols=64 Identities=14% Similarity=0.215 Sum_probs=44.8
Q ss_pred cccceEEEecCCCCCCCCcCccccccc-----------------------hhhhhcCCCceEEEecCCCcccchhchHHH
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKG-----------------------DEFKTLVPDLEVVVIRDAQHYIQLEKAEQI 305 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 305 (323)
..+.|.+-.|..|-+|.....+.|.+. ....+...|..+..+..+||+...++|+..
T Consensus 324 ~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmvp~Dnp~~a 403 (414)
T KOG1283|consen 324 NGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMVPADNPAAA 403 (414)
T ss_pred CCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcccCCCHHHH
Confidence 347888888888888876665554322 112233456678889999999999999887
Q ss_pred HHHHHHH
Q 020621 306 TEEILSH 312 (323)
Q Consensus 306 ~~~i~~f 312 (323)
...++.+
T Consensus 404 ~hmlr~v 410 (414)
T KOG1283|consen 404 SHMLRHV 410 (414)
T ss_pred hhheeec
Confidence 7666544
No 333
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=43.54 E-value=45 Score=26.14 Aligned_cols=20 Identities=30% Similarity=0.162 Sum_probs=17.4
Q ss_pred EEEEechHHHHHHHHHhhCc
Q 020621 96 FVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~p 115 (323)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 48999999999999998654
No 334
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=43.53 E-value=38 Score=23.29 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=21.2
Q ss_pred CeEEEEcccC-------------CCchhHHH-----------HHHhhhhcCcEEEee
Q 020621 25 PLVLLIHGFP-------------ELWSCWKY-----------QINHLAEHGYHVVAP 57 (323)
Q Consensus 25 ~~lv~~hG~~-------------~~~~~~~~-----------~~~~l~~~G~~vi~~ 57 (323)
..+||+||-. .+.+.|.. .+..|.+.|++|+++
T Consensus 58 ~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 58 RCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred eEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4799999953 22344532 245677789988775
No 335
>COG0218 Predicted GTPase [General function prediction only]
Probab=43.52 E-value=42 Score=25.19 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=12.4
Q ss_pred EEeeCCCCCCCCCCCC
Q 020621 54 VVAPDMRGYGDSDSPQ 69 (323)
Q Consensus 54 vi~~d~~G~G~s~~~~ 69 (323)
...+|+||+|....+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 6788999999876544
No 336
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=43.41 E-value=1.2e+02 Score=21.51 Aligned_cols=38 Identities=26% Similarity=0.331 Sum_probs=26.8
Q ss_pred CCCCeEEEE-cccCCCchhHHHHHHhhhhcCcEEEeeCC
Q 020621 22 GQGPLVLLI-HGFPELWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 22 g~~~~lv~~-hG~~~~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
|.+|.|++. .|..++...-.-+...|++.||.|+..-+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 556655544 57666666666667889999999997643
No 337
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=42.98 E-value=31 Score=18.92 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=24.0
Q ss_pred CCCcHHHHHHHHHHHHHHhCCccEEEEE
Q 020621 72 ESYTIFHLVGDLIGLLDELGEEQAFVVG 99 (323)
Q Consensus 72 ~~~~~~~~~~~i~~~l~~~~~~~~~lvG 99 (323)
..++.+.+..|+...|..+.+..+.++|
T Consensus 4 ~~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 4 TAWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 4577889999999999998888888886
No 338
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=42.83 E-value=38 Score=29.40 Aligned_cols=106 Identities=16% Similarity=0.062 Sum_probs=53.3
Q ss_pred CeEEEEcccCC---CchhHHHHHHhhhhcC-cEEEeeCCC----C---C-CCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 25 PLVLLIHGFPE---LWSCWKYQINHLAEHG-YHVVAPDMR----G---Y-GDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 25 ~~lv~~hG~~~---~~~~~~~~~~~l~~~G-~~vi~~d~~----G---~-G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
.++|+|-|.|. ++..=..-.+.|+..+ --|+.+++| | . |.++.+.+..-++..-....+++-+...|.
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGG 215 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGG 215 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCC
Confidence 47888887663 2211111124454442 334445554 1 2 223323222333334445566666667754
Q ss_pred --ccEEEEEechHHHHH-HHHHhh-CccccceeeeecccCCC
Q 020621 93 --EQAFVVGHDWGAQIA-WNLCLF-RPDRVKALVNLGVAYMP 130 (323)
Q Consensus 93 --~~~~lvG~S~Gg~~a-~~~a~~-~p~~v~~lvl~~~~~~~ 130 (323)
+++.|+|.|.|+.-. +++.+= ....++..|+-++....
T Consensus 216 np~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 216 NPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred CcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCC
Confidence 479999999998633 333321 11256666666655443
No 339
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=41.97 E-value=51 Score=23.53 Aligned_cols=19 Identities=26% Similarity=0.319 Sum_probs=16.3
Q ss_pred ccEEEEEechHHHHHHHHH
Q 020621 93 EQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 93 ~~~~lvG~S~Gg~~a~~~a 111 (323)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4457889999999999998
No 340
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=41.91 E-value=45 Score=25.82 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=45.7
Q ss_pred CCeEEEEcccCCCc--hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHhCC-ccEEEEE
Q 020621 24 GPLVLLIHGFPELW--SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGD-LIGLLDELGE-EQAFVVG 99 (323)
Q Consensus 24 ~~~lv~~hG~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~-i~~~l~~~~~-~~~~lvG 99 (323)
.|+||++.|+.+++ ..-..+...|..+|++|.++.-| +-++...+ +-.+-..+.. .++.++=
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p--------------t~eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP--------------SDRERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC--------------CHHHHcChHHHHHHHhCCCCCeEEEEe
Confidence 48999999998764 45677888899999999998654 22233232 4455556633 3788876
Q ss_pred echHHH
Q 020621 100 HDWGAQ 105 (323)
Q Consensus 100 ~S~Gg~ 105 (323)
-|+=+-
T Consensus 96 rSwY~~ 101 (230)
T TIGR03707 96 RSWYNR 101 (230)
T ss_pred Cchhhh
Confidence 676443
No 341
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.65 E-value=28 Score=27.60 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=12.2
Q ss_pred CCccEEEEEechHHH
Q 020621 91 GEEQAFVVGHDWGAQ 105 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~ 105 (323)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 346899999999975
No 342
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.43 E-value=52 Score=25.92 Aligned_cols=22 Identities=18% Similarity=0.092 Sum_probs=18.4
Q ss_pred cEEEEEechHHHHHHHHHhhCc
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999987655
No 343
>PRK04435 hypothetical protein; Provisional
Probab=41.24 E-value=74 Score=22.57 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=29.3
Q ss_pred EEEeecCCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCC
Q 020621 16 MHIAEKGQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 16 ~~~~~~g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
..+.....+..+-+.-...........++..+++.|.++..++.
T Consensus 59 f~~~~~~~~r~vtL~i~l~Dr~GlLs~Il~~IA~~~aNIltI~q 102 (147)
T PRK04435 59 FPFDEMVKGKIITLSLLLEDRSGTLSKVLNVIAEAGGNILTINQ 102 (147)
T ss_pred ECccccCCCcEEEEEEEEecCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 33444444544444444444566788899999999999998865
No 344
>PRK09936 hypothetical protein; Provisional
Probab=40.83 E-value=1.1e+02 Score=24.71 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=37.1
Q ss_pred CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc
Q 020621 36 LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE 93 (323)
Q Consensus 36 ~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 93 (323)
+...|..+.+.+...|++.+++.+-++|+|+-.. .+-+.....+.....|.+
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl~ 87 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGLK 87 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCCE
Confidence 4567999999999999999999999999884322 134445555555555443
No 345
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=40.74 E-value=93 Score=23.61 Aligned_cols=57 Identities=21% Similarity=0.194 Sum_probs=33.9
Q ss_pred CCeEEEEcccCCCchh---HHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 020621 24 GPLVLLIHGFPELWSC---WKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDE 89 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~---~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~ 89 (323)
..+|+++||-....-- -....+.|.+.|.+|-.-.++|.|-+ ...+...++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~---------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE---------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC---------CCHHHHHHHHHHHhh
Confidence 4589999998876432 34556778888777776666655533 224566677777653
No 346
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=40.58 E-value=2.1e+02 Score=23.63 Aligned_cols=89 Identities=16% Similarity=0.064 Sum_probs=50.8
Q ss_pred CeEEEEcccCC----Cc-hhHHHHHHhhhh-cCcEEEeeCCCCCCCCCCCCC--------------CCCCcHHHHHHHHH
Q 020621 25 PLVLLIHGFPE----LW-SCWKYQINHLAE-HGYHVVAPDMRGYGDSDSPQD--------------PESYTIFHLVGDLI 84 (323)
Q Consensus 25 ~~lv~~hG~~~----~~-~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~--------------~~~~~~~~~~~~i~ 84 (323)
..|+++-|... .. ..-..+...|.. .|-+++++=-+|.|.-.-... ...++....++...
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 35666666432 11 223344555555 578888887788886532110 01223333333333
Q ss_pred HHH-HHh-CCccEEEEEechHHHHHHHHHhh
Q 020621 85 GLL-DEL-GEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 85 ~~l-~~~-~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
.++ .+. ..++|+++|+|-|+.+|--+|.+
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 333 333 34689999999999999888764
No 347
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=40.50 E-value=57 Score=27.60 Aligned_cols=38 Identities=18% Similarity=0.153 Sum_probs=29.3
Q ss_pred EEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCC
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSD 66 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~ 66 (323)
|||+|+..- ..|+.+++.|.++|+.|.++-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788887553 34788999999999999998777665543
No 348
>PLN03006 carbonate dehydratase
Probab=40.32 E-value=35 Score=27.53 Aligned_cols=31 Identities=23% Similarity=0.172 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWN 109 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~ 109 (323)
....|...+.+++.+.|+++|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHH
Confidence 4567888889999999999999997766643
No 349
>TIGR03586 PseI pseudaminic acid synthase.
Probab=40.18 E-value=2.2e+02 Score=23.65 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=49.5
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCc-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGY-HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
.+.||++--|+ .+-..|...++.+.+.|. .++.... -|..+......++ ..+..+-+..+ -++.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL----~~i~~lk~~f~-~pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANL----RTIPDLAERFN-VPVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCH----HHHHHHHHHhC-CCEEeeCCC
Confidence 46789999999 588889999999988776 5666653 2322221122222 22222222333 477788999
Q ss_pred hHHHHHHHHHhh
Q 020621 102 WGAQIAWNLCLF 113 (323)
Q Consensus 102 ~Gg~~a~~~a~~ 113 (323)
.|-.+++...+.
T Consensus 203 ~G~~~~~aAva~ 214 (327)
T TIGR03586 203 LGILAPVAAVAL 214 (327)
T ss_pred CchHHHHHHHHc
Confidence 997666555544
No 350
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=40.14 E-value=35 Score=24.71 Aligned_cols=74 Identities=12% Similarity=0.123 Sum_probs=46.0
Q ss_pred EEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCC----CCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 28 LLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQ----DPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 28 v~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
|++-|.|++...-..++.+|..+ |+--.+-+|..-.|.... -..+|.++.. ....++.++..--+|+|.|-.
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 55668888887778888888776 666555565554442111 1134454443 334555566666789999998
Q ss_pred HH
Q 020621 104 AQ 105 (323)
Q Consensus 104 g~ 105 (323)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 85
No 351
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=39.66 E-value=2e+02 Score=23.26 Aligned_cols=87 Identities=10% Similarity=-0.005 Sum_probs=54.4
Q ss_pred CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 36 LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 36 ~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+...++.+++.+.+.|..-+.+- |.+ ... ...|.++..+-+..+++..+.+-.+++|-+..-.-+.+.+...-
T Consensus 24 D~~~l~~li~~l~~~Gv~gi~v~----Gst-GE~--~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~ 96 (296)
T TIGR03249 24 DEAAYRENIEWLLGYGLEALFAA----GGT-GEF--FSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAE 96 (296)
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC----CCC-cCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHH
Confidence 44567788888988888777652 222 111 46788888888888888876554556666533444555554432
Q ss_pred c-ccceeeeecccCC
Q 020621 116 D-RVKALVNLGVAYM 129 (323)
Q Consensus 116 ~-~v~~lvl~~~~~~ 129 (323)
+ -+++++++.|.+.
T Consensus 97 ~~Gadav~~~pP~y~ 111 (296)
T TIGR03249 97 KAGADGYLLLPPYLI 111 (296)
T ss_pred HhCCCEEEECCCCCC
Confidence 2 4677776665543
No 352
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=39.61 E-value=79 Score=22.44 Aligned_cols=36 Identities=22% Similarity=0.095 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 76 IFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 76 ~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
..+....+...+..++.+.++++||+-=|++...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 345667777788899999999999999887774443
No 353
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=39.46 E-value=2.5e+02 Score=24.21 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=49.7
Q ss_pred hHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcccc
Q 020621 39 CWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRV 118 (323)
Q Consensus 39 ~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 118 (323)
.-...+..|.+.|..|+++ ...+.+++...+..+++..+.++.+++ .-||.++..+...+|+..
T Consensus 73 tqd~vaa~l~~~gi~v~a~--------------~~~~~~~y~~~~~~~l~~~~~~p~~i~--DdGg~~~~~~~~~~~~~~ 136 (413)
T cd00401 73 TQDHAAAAIAAAGIPVFAW--------------KGETLEEYWWCIEQALKFPDGEPNMIL--DDGGDLTLLIHKKHPELL 136 (413)
T ss_pred chHHHHHHHHhcCceEEEE--------------cCCCHHHHHHHHHHHHhccCCCCcEEE--ecchHHHHHHHhhhhhhh
Confidence 3456677888888888887 234667777788888887555665555 778888888877777765
Q ss_pred ceeeee
Q 020621 119 KALVNL 124 (323)
Q Consensus 119 ~~lvl~ 124 (323)
..++..
T Consensus 137 ~~~~G~ 142 (413)
T cd00401 137 PGIRGI 142 (413)
T ss_pred hccEEE
Confidence 555544
No 354
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=39.42 E-value=56 Score=25.69 Aligned_cols=22 Identities=23% Similarity=-0.022 Sum_probs=18.2
Q ss_pred cEEEEEechHHHHHHHHHhhCc
Q 020621 94 QAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 94 ~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3458899999999999988654
No 355
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=39.24 E-value=1.2e+02 Score=20.35 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=25.0
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
+|+++.....+......+...+.+.|+.+...+
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~ 34 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLG 34 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcC
Confidence 566666666666666677788888999998884
No 356
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.21 E-value=1.5e+02 Score=24.20 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=48.8
Q ss_pred HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCC-CCcHHHH--HHHHHHHHHHhCCcc------EEEEEech---------
Q 020621 41 KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPE-SYTIFHL--VGDLIGLLDELGEEQ------AFVVGHDW--------- 102 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~-~~~~~~~--~~~i~~~l~~~~~~~------~~lvG~S~--------- 102 (323)
...+..|.+.||.|+++|---.|......... ..-.-|+ .+-+.++++....+- ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 34566788899999999988666654322100 1111111 123455555544442 23466664
Q ss_pred --HHHHHH-HHHhhCccccceeeeecccCCC
Q 020621 103 --GAQIAW-NLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 103 --Gg~~a~-~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+|.+.+ ..+.++ .|+.+|..+++...
T Consensus 94 Nv~gTl~Ll~am~~~--gv~~~vFSStAavY 122 (329)
T COG1087 94 NVVGTLNLIEAMLQT--GVKKFIFSSTAAVY 122 (329)
T ss_pred chHhHHHHHHHHHHh--CCCEEEEecchhhc
Confidence 344443 444433 49999998876543
No 357
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=39.11 E-value=41 Score=18.18 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=23.5
Q ss_pred hcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 49 EHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 49 ~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
+.||.+.++|+||+-. ...|.++..+.+.+++.
T Consensus 11 ~~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT-------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHH
Confidence 3479999999997652 24467777777777665
No 358
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=39.08 E-value=44 Score=24.34 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=27.0
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEee
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAP 57 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~ 57 (323)
+.+.|+++-|-|.+...=.-.++.|.++|+.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 46788888888877776667789999999998883
No 359
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=39.01 E-value=45 Score=22.61 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHH
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAW 108 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~ 108 (323)
+....+...+..++.+.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4567777788899999999999987776554
No 360
>PRK09273 hypothetical protein; Provisional
Probab=38.85 E-value=1.8e+02 Score=22.25 Aligned_cols=77 Identities=16% Similarity=0.008 Sum_probs=43.3
Q ss_pred hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEE-EEEechHHHHHHHHHhhCcc
Q 020621 38 SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAF-VVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 38 ~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~ 116 (323)
..+..+...|.+.||.|+=+-. ....+ ...++.+++..+...+..-..+..+ +.|...|.++ .|.++|.
T Consensus 17 ~i~~~L~~~L~~~G~eV~D~G~-----~~~~~--~s~dYpd~a~~vA~~V~~g~~d~GIliCGTGiG~si---AANK~pG 86 (211)
T PRK09273 17 IIYEALKKVADPKGHEVFNYGM-----YDEED--HQLTYVQNGIMASILLNSKAVDFVVTGCGTGQGAML---ALNSFPG 86 (211)
T ss_pred HHHHHHHHHHHHCCCEEEEeCC-----CCCCC--CCCChHHHHHHHHHHHHcCCCCEEEEEcCcHHHHHH---HHhcCCC
Confidence 3567778889999998854422 11111 2457777777777777543333332 3355555333 4556775
Q ss_pred ccceeeeec
Q 020621 117 RVKALVNLG 125 (323)
Q Consensus 117 ~v~~lvl~~ 125 (323)
|++....+
T Consensus 87 -Iraalc~d 94 (211)
T PRK09273 87 -VVCGYCID 94 (211)
T ss_pred -eEEEEeCC
Confidence 55544444
No 361
>COG2452 Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
Probab=38.64 E-value=1.6e+02 Score=21.88 Aligned_cols=53 Identities=17% Similarity=0.095 Sum_probs=34.7
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL 90 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~ 90 (323)
-+++.|----+...+..+...+..+|..++.+|. ...+.+++++|+.+++...
T Consensus 117 rVvV~ykDRL~RFGfe~le~~~~a~~~eivvv~~------------~e~~~eELveDlisIltsf 169 (193)
T COG2452 117 RVVVSYKDRLNRFGFELVEAVCKAHNVEIVVVNQ------------EDKDSEELVEDLVSILTSF 169 (193)
T ss_pred EEEEEccchHhHHhHHHHHHHHHhcCcEEEEecC------------CCCCHHHHHHHHHHHHHHH
Confidence 4455554333333355566667777888888875 2334489999999988754
No 362
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=38.52 E-value=1.1e+02 Score=26.75 Aligned_cols=78 Identities=10% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCeEEEEcccCCCchh-HHHHHHhhhhcCcEEEeeCCCCCCCCCCC-------CC----------------CCCCcHHHH
Q 020621 24 GPLVLLIHGFPELWSC-WKYQINHLAEHGYHVVAPDMRGYGDSDSP-------QD----------------PESYTIFHL 79 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~-~~~~~~~l~~~G~~vi~~d~~G~G~s~~~-------~~----------------~~~~~~~~~ 79 (323)
..-.+.+-|+.-.... .+.+.+.|...+.+++-+++++.|.-... +. ....+-++.
T Consensus 96 SqKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEI 175 (831)
T PRK15180 96 SQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAI 175 (831)
T ss_pred ceeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHH
Confidence 3457778887765443 45677888888888888999988776431 10 112345566
Q ss_pred HHHHHHHHHHhCCccEEEEEec
Q 020621 80 VGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lvG~S 101 (323)
-+|+.+++.-+|.+++.+|-|.
T Consensus 176 EeDmmeIVqLLGk~rVvfVTHV 197 (831)
T PRK15180 176 EQDMMEIVQLLGRDRVMFMTHV 197 (831)
T ss_pred HHHHHHHHHHhCCCcEEEEEee
Confidence 6788888888999999999986
No 363
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=38.41 E-value=2.2e+02 Score=23.29 Aligned_cols=88 Identities=9% Similarity=-0.012 Sum_probs=59.6
Q ss_pred CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEec-hHHHHHHHHHhhC
Q 020621 36 LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHD-WGAQIAWNLCLFR 114 (323)
Q Consensus 36 ~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S-~Gg~~a~~~a~~~ 114 (323)
+...+..+++.+.+.|..-+.+- |.+ +.. ...+.++..+-+..+++..+.+-.+++|.+ .+-.-+..++...
T Consensus 27 D~~~l~~lv~~li~~Gv~Gi~v~----Gst-GE~--~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A 99 (309)
T cd00952 27 DLDETARLVERLIAAGVDGILTM----GTF-GEC--ATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRAL 99 (309)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC----ccc-ccc--hhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHH
Confidence 44556777888888887766652 222 222 567888998888899988876555677776 5666777777654
Q ss_pred cc-ccceeeeecccCCC
Q 020621 115 PD-RVKALVNLGVAYMP 130 (323)
Q Consensus 115 p~-~v~~lvl~~~~~~~ 130 (323)
-+ .+++++++.|.+..
T Consensus 100 ~~~Gad~vlv~~P~y~~ 116 (309)
T cd00952 100 LDLGADGTMLGRPMWLP 116 (309)
T ss_pred HHhCCCEEEECCCcCCC
Confidence 33 57778777775544
No 364
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=37.97 E-value=1.7e+02 Score=21.74 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=35.7
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHH-HHHHHhCCc
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLI-GLLDELGEE 93 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~-~~l~~~~~~ 93 (323)
+.++++++--.-....-...+..|.+.|+.++-+.. |+- . ...+++++++.+. .+++.+|.+
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~-g~~--~-----~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMP-AFY--T-----RPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCC-ccc--C-----CCCCHHHHHHHHHHHHHHHcCCC
Confidence 346666663221222224455678888998876653 321 1 2347778777554 577777754
No 365
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=37.46 E-value=1.8e+02 Score=23.38 Aligned_cols=56 Identities=18% Similarity=-0.010 Sum_probs=35.9
Q ss_pred EEEcccCCCc-hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 28 LLIHGFPELW-SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 28 v~~hG~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
|+.+..+.+. ..+....+.|.+.||.|+..+.-...... ..-+.++-++|+.++++
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~-----~a~s~~~Ra~dL~~a~~ 59 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVLARDGY-----LAGTDEERAADLNAAFA 59 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchhhhcCc-----cCCCHHHHHHHHHHHhh
Confidence 3445555555 66777788899999999998765443221 23355666777766654
No 366
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=37.44 E-value=42 Score=27.40 Aligned_cols=22 Identities=32% Similarity=0.421 Sum_probs=18.7
Q ss_pred CCccEEEEEechHHHHHHHHHh
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999999888776
No 367
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=36.91 E-value=36 Score=25.82 Aligned_cols=36 Identities=19% Similarity=0.071 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 77 FHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 77 ~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
.+....+...+..++.+.|+++||+==|++...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 467788888999999999999999997777665543
No 368
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=36.70 E-value=52 Score=25.06 Aligned_cols=65 Identities=25% Similarity=0.059 Sum_probs=42.3
Q ss_pred HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHH
Q 020621 44 INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWN 109 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~ 109 (323)
+..+++. ..+=.+-.+=.|.|.........+-.|-++|+.+++.....+-..+=|.|.|+.++-.
T Consensus 56 i~lyaec-m~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 56 IDLYAEC-MGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHHH-hcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 3445554 4444444444466654432245566788999999999887555578899999887654
No 369
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.69 E-value=58 Score=25.52 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=17.8
Q ss_pred EEEEEechHHHHHHHHHhhCcccc
Q 020621 95 AFVVGHDWGAQIAWNLCLFRPDRV 118 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~~p~~v 118 (323)
-.+.|-|.|+.+|..++. .|+++
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChHHH
Confidence 378899999999999984 34433
No 370
>PRK10437 carbonic anhydrase; Provisional
Probab=36.65 E-value=34 Score=26.23 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
....+...+..++.+.|+++||+--|.+...+.
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 455667778889999999999999777766553
No 371
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=36.33 E-value=2.2e+02 Score=22.75 Aligned_cols=71 Identities=8% Similarity=0.055 Sum_probs=43.3
Q ss_pred HHhhhh-cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE-EechHHHHHHHHHhhCc-cccce
Q 020621 44 INHLAE-HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV-GHDWGAQIAWNLCLFRP-DRVKA 120 (323)
Q Consensus 44 ~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv-G~S~Gg~~a~~~a~~~p-~~v~~ 120 (323)
+..+.+ .++.++.+|.+|..... .+..+.+.++++......++|+ .-++++.-+...+..+. -.+.+
T Consensus 146 l~~l~~~~~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~ 215 (270)
T PRK06731 146 LTYFKEEARVDYILIDTAGKNYRA----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDG 215 (270)
T ss_pred HHHHHhcCCCCEEEEECCCCCcCC----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCE
Confidence 344443 36899999998765321 2345556666665555556655 44667777777776653 35666
Q ss_pred eeee
Q 020621 121 LVNL 124 (323)
Q Consensus 121 lvl~ 124 (323)
+|+-
T Consensus 216 ~I~T 219 (270)
T PRK06731 216 IVFT 219 (270)
T ss_pred EEEE
Confidence 6654
No 372
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=36.26 E-value=2.6e+02 Score=23.42 Aligned_cols=77 Identities=12% Similarity=0.059 Sum_probs=46.6
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcC--cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHG--YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
-.++|+|...+.+.-..+++.+...+ .+++-++- .|.+... ..+ .+.++.+.++++..|+. +.+..|.|
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp--~~~~~~~----~ps-~e~i~~f~~~L~~~Gi~--vtvR~~~G 329 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNP--IDEVEFQ----RPS-PKRIQAFQRVLEQRGVA--VSVRASRG 329 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCC--CCCCCCC----CCC-HHHHHHHHHHHHHCCCe--EEEeCCCC
Confidence 36889999999888887777666532 33444433 2333211 112 34455666667666653 56789999
Q ss_pred HHHHHHHH
Q 020621 104 AQIAWNLC 111 (323)
Q Consensus 104 g~~a~~~a 111 (323)
.-+.....
T Consensus 330 ~di~aaCG 337 (345)
T PRK14457 330 LDANAACG 337 (345)
T ss_pred Cchhhccc
Confidence 77665443
No 373
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=36.17 E-value=1.9e+02 Score=21.85 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
++.....+|..++....-++|.|+|..+....+
T Consensus 64 w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 64 WLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 577888888877766567999999988766554
No 374
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=36.14 E-value=1.5e+02 Score=20.86 Aligned_cols=29 Identities=14% Similarity=-0.042 Sum_probs=20.8
Q ss_pred ccCCCchhHHHHHHhhhhcCcEEEeeCCC
Q 020621 32 GFPELWSCWKYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 60 (323)
+.||.......++..|.++|++|.++-..
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 44555556678889999999998888544
No 375
>PRK06490 glutamine amidotransferase; Provisional
Probab=36.09 E-value=2.1e+02 Score=22.35 Aligned_cols=34 Identities=18% Similarity=0.095 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
.+...+.++++..-..++-++|.|+|..+...+.
T Consensus 70 ~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 70 DFIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred hHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 4455556666644334556999999998877654
No 376
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=35.84 E-value=76 Score=18.48 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=26.7
Q ss_pred hcCCCceEEEecCCCcccchhchHHHHHHHHHHhhhc
Q 020621 280 TLVPDLEVVVIRDAQHYIQLEKAEQITEEILSHFRKK 316 (323)
Q Consensus 280 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (323)
+..|+..+... ++-++.-.|.++++.+.+.+|-++.
T Consensus 23 e~~PDTvItL~-~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 23 EETPDTVITLT-NGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EEcCCeEEEEe-CCCEEEEECCHHHHHHHHHHHHHhc
Confidence 45677444444 5477788899999999999997653
No 377
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=35.54 E-value=70 Score=28.58 Aligned_cols=49 Identities=16% Similarity=0.267 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHh--CCccEEEEEe------chHHHHHHHHHhhCccccceeeeecccC
Q 020621 79 LVGDLIGLLDEL--GEEQAFVVGH------DWGAQIAWNLCLFRPDRVKALVNLGVAY 128 (323)
Q Consensus 79 ~~~~i~~~l~~~--~~~~~~lvG~------S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 128 (323)
-++++...+..+ ..++++++|| |.|+.+++..-+..-++ .+.+.++|--
T Consensus 322 RaRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 322 RARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 344444444332 2569999999 78999987655443333 6677777643
No 378
>PRK04148 hypothetical protein; Provisional
Probab=35.52 E-value=72 Score=22.25 Aligned_cols=43 Identities=7% Similarity=0.000 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeec
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
+++.+.+.+......++..+|...|..+|..++..- .-++.++
T Consensus 4 i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaID 46 (134)
T PRK04148 4 IAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVID 46 (134)
T ss_pred HHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEE
Confidence 334444433332335788999998888888888542 2455555
No 379
>PRK07451 translation initiation factor Sui1; Validated
Probab=35.52 E-value=1.4e+02 Score=20.18 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=43.0
Q ss_pred EEeecC-CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 17 HIAEKG-QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 17 ~~~~~g-~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
.+...+ .+..|-+|-|+.........++..|... -|+|.+-... .-.---|..+.+.++|...+.
T Consensus 43 ~~~r~gR~GK~VTvV~Gl~~~~~dlk~LaK~LK~k---------~gcGGtvkd~--~IelQGD~r~~v~~~L~~~Gf 108 (115)
T PRK07451 43 QATRSGRKGKTVTVITGFQHKPETLAKLLKQLKTQ---------CGSGGTVKDN--TIEIQGDHRQKILEILIKLGY 108 (115)
T ss_pred EEEecCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH---------hcCCceEcCC--EEEEcCcHHHHHHHHHHHCCC
Confidence 333444 4689999999998878888899888776 4566664332 111112456677788877765
No 380
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=35.13 E-value=1.9e+02 Score=21.57 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=37.7
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHH-HHHHHhCCc
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLI-GLLDELGEE 93 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~-~~l~~~~~~ 93 (323)
+.++++++-..-....-...+..|.+.|+.|+-+.. |+- . ...+++++++.+. .+++.++++
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~--a-----~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFY--H-----RPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-ccc--c-----CCCCHHHHHHHHHHHHHHhcCCC
Confidence 346677773222222234556778888988887764 222 1 2347888888655 677888765
No 381
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=34.76 E-value=1.5e+02 Score=20.12 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=45.3
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-ccEEEEEechHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE-EQAFVVGHDWGA 104 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~lvG~S~Gg 104 (323)
.||.-|| .-+......++.+....-.+.++++. ...+.+++.+.+.++++..+. +.++++--=+||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 4777898 33444555566555432467777764 345788888999999988764 456665555577
Q ss_pred HHHH
Q 020621 105 QIAW 108 (323)
Q Consensus 105 ~~a~ 108 (323)
....
T Consensus 70 Sp~n 73 (122)
T cd00006 70 SPNN 73 (122)
T ss_pred CHHH
Confidence 6544
No 382
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.54 E-value=51 Score=24.09 Aligned_cols=23 Identities=35% Similarity=0.245 Sum_probs=17.6
Q ss_pred CCccEEEEEechHHHHHHHHHhh
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
....-.+.|-|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 33455788999999999887765
No 383
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=34.38 E-value=95 Score=28.41 Aligned_cols=43 Identities=23% Similarity=0.146 Sum_probs=29.9
Q ss_pred CCeEEEEcccCCCc---hhHHHHHHhhhhcCcEEEeeCCCC--CCCCC
Q 020621 24 GPLVLLIHGFPELW---SCWKYQINHLAEHGYHVVAPDMRG--YGDSD 66 (323)
Q Consensus 24 ~~~lv~~hG~~~~~---~~~~~~~~~l~~~G~~vi~~d~~G--~G~s~ 66 (323)
..|++++||..... ..-..+...|...|..|-..-+|+ |+.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 46899999987643 334566788888888777777765 45443
No 384
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=34.30 E-value=2.6e+02 Score=22.79 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=45.3
Q ss_pred CeEEEE-cccCCCchhHHHHHHhhhhcCcEEEee-CCCC---CCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEE
Q 020621 25 PLVLLI-HGFPELWSCWKYQINHLAEHGYHVVAP-DMRG---YGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVG 99 (323)
Q Consensus 25 ~~lv~~-hG~~~~~~~~~~~~~~l~~~G~~vi~~-d~~G---~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG 99 (323)
|.++=+ .|+| +.......++.+.+.|..-+.+ |..+ +|..... ...+.+++++-|.+..+......++|++
T Consensus 80 PviaD~d~GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~---~lv~~ee~~~kI~Aa~~a~~~~d~~IiA 155 (292)
T PRK11320 80 PLLVDIDTGFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNK---EIVSQEEMVDRIKAAVDARTDPDFVIMA 155 (292)
T ss_pred CEEEECCCCCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---cccCHHHHHHHHHHHHHhccCCCeEEEE
Confidence 544444 5666 6666777888888888888887 7652 2322211 3567888888888887765434455543
No 385
>PRK10867 signal recognition particle protein; Provisional
Probab=34.22 E-value=3.2e+02 Score=23.83 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=42.2
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--ccceee
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RVKALV 122 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lv 122 (323)
......+|.++.+|-+|....+ +.+.+.+..+.+......+++|.-++-|.-+...+..+.+ .+.++|
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~d----------~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~giI 246 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHID----------EELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVI 246 (433)
T ss_pred HHHHhcCCCEEEEeCCCCcccC----------HHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEE
Confidence 3444557999999998765321 2344555555555555666777666666666666655432 356666
Q ss_pred e
Q 020621 123 N 123 (323)
Q Consensus 123 l 123 (323)
+
T Consensus 247 l 247 (433)
T PRK10867 247 L 247 (433)
T ss_pred E
Confidence 6
No 386
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.15 E-value=2.6e+02 Score=23.94 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=36.7
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 116 (323)
..+.+.+|.+|.+|--|.-. .-..+-+.+.++.+.+..+.+++|=-+.=|..|..-|..+.+
T Consensus 177 ~~fKke~fdvIIvDTSGRh~----------qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~ 238 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRHK----------QEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKE 238 (483)
T ss_pred HHHHhcCCcEEEEeCCCchh----------hhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHH
Confidence 44556689999999754322 223455566666666666666666555555555555554443
No 387
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=33.30 E-value=2.7e+02 Score=22.75 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=23.8
Q ss_pred EEEEccc--CCCchhHHHHHHhhhhcCcEEEeeCCCC
Q 020621 27 VLLIHGF--PELWSCWKYQINHLAEHGYHVVAPDMRG 61 (323)
Q Consensus 27 lv~~hG~--~~~~~~~~~~~~~l~~~G~~vi~~d~~G 61 (323)
+++++|. ||.......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4555654 4445556677899998899988876544
No 388
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=33.27 E-value=94 Score=27.15 Aligned_cols=60 Identities=8% Similarity=0.066 Sum_probs=41.6
Q ss_pred cccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCcccch-h-----------chHHHHHHHHHHhhhc
Q 020621 249 ICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYIQL-E-----------KAEQITEEILSHFRKK 316 (323)
Q Consensus 249 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~-----------~~~~~~~~i~~fl~~~ 316 (323)
....|++.+|..|+.-.-.. ......++..+.+.|++|+.-+ . ....+.+.|..||+..
T Consensus 432 ~atnVvf~NG~~DPWh~LG~---------~~st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~~ 502 (514)
T KOG2182|consen 432 NATNVVFPNGSLDPWHALGL---------QNSTDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQQ 502 (514)
T ss_pred CcceEEecCCCCCchhhhcc---------ccCCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhhc
Confidence 45689999999998765332 1223345788899999998632 1 2466777788888765
Q ss_pred c
Q 020621 317 S 317 (323)
Q Consensus 317 ~ 317 (323)
.
T Consensus 503 ~ 503 (514)
T KOG2182|consen 503 P 503 (514)
T ss_pred c
Confidence 4
No 389
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=32.92 E-value=2.6e+02 Score=22.55 Aligned_cols=87 Identities=11% Similarity=0.079 Sum_probs=54.3
Q ss_pred CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCc
Q 020621 36 LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRP 115 (323)
Q Consensus 36 ~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 115 (323)
+......+++.+.+.|..-+.+- |.+ ... ...+.++..+-+..+++..+.+-.+++|-+.+..-+..++...-
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~----Gst-GE~--~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~ 91 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAA----GGT-GEF--FSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAE 91 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC----cCC-cCc--ccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHH
Confidence 34456777888888888776652 211 111 46788888888888888876544455565545555666655432
Q ss_pred c-ccceeeeecccCC
Q 020621 116 D-RVKALVNLGVAYM 129 (323)
Q Consensus 116 ~-~v~~lvl~~~~~~ 129 (323)
+ -+++++++.|.+.
T Consensus 92 ~~Gad~v~~~pP~y~ 106 (289)
T cd00951 92 KAGADGILLLPPYLT 106 (289)
T ss_pred HhCCCEEEECCCCCC
Confidence 2 4677777665543
No 390
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.84 E-value=62 Score=24.21 Aligned_cols=33 Identities=21% Similarity=0.075 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
....+...+.+++.+.++++|||--|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 556777788899999999999998776665543
No 391
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=32.82 E-value=1.2e+02 Score=22.65 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=10.6
Q ss_pred EEeeCCCCCCCCCCC
Q 020621 54 VVAPDMRGYGDSDSP 68 (323)
Q Consensus 54 vi~~d~~G~G~s~~~ 68 (323)
+|++| ||||..++-
T Consensus 2 ~I~iD-pGHGg~d~G 15 (189)
T TIGR02883 2 IIVID-PGHGGIDGG 15 (189)
T ss_pred EEEEe-CCCCCCCCC
Confidence 67788 899987643
No 392
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=32.48 E-value=1.5e+02 Score=20.69 Aligned_cols=39 Identities=21% Similarity=0.325 Sum_probs=28.6
Q ss_pred CCCeEEEEcccCC----CchhHHHHHHhhhhcCc---EEEeeCCCC
Q 020621 23 QGPLVLLIHGFPE----LWSCWKYQINHLAEHGY---HVVAPDMRG 61 (323)
Q Consensus 23 ~~~~lv~~hG~~~----~~~~~~~~~~~l~~~G~---~vi~~d~~G 61 (323)
...+||+.|+..+ .+.....+...|...|| +|++++..|
T Consensus 16 k~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 16 KNVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred CcEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 4457888888775 35667788899999887 577777653
No 393
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=32.06 E-value=3.6e+02 Score=23.83 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=38.3
Q ss_pred CCeEEEEcccCCC---chhHHHHHHhhhhcCcEEEeeCCCC----CCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 020621 24 GPLVLLIHGFPEL---WSCWKYQINHLAEHGYHVVAPDMRG----YGDSDSPQDPESYTIFHLVGDLIGLLD 88 (323)
Q Consensus 24 ~~~lv~~hG~~~~---~~~~~~~~~~l~~~G~~vi~~d~~G----~G~s~~~~~~~~~~~~~~~~~i~~~l~ 88 (323)
+.++|+++.+... .......+..|.+.|+.|+-++. | +|..... .-..++++++.+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~G---rm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVG---RMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCC---CCCCHHHHHHHHHHHHh
Confidence 4578888865543 22334557788889999987654 2 3433322 34467777777777764
No 394
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=31.93 E-value=2.7e+02 Score=23.05 Aligned_cols=35 Identities=14% Similarity=-0.032 Sum_probs=24.8
Q ss_pred EEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCC
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G 61 (323)
++...|.++.-..+..++..|.++|+.|..+-..+
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 34445677666666788899999999988875443
No 395
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=31.92 E-value=46 Score=22.91 Aligned_cols=33 Identities=12% Similarity=-0.015 Sum_probs=22.2
Q ss_pred EEEEcccCCCchhHHHHHHhhhhcCcEEEeeCC
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
++...|..|+-.-+..+.+.|.++|++|...-.
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeec
Confidence 344455556666667778999999999975543
No 396
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=31.87 E-value=1e+02 Score=21.63 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=25.8
Q ss_pred eEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCCCCCCCCC
Q 020621 26 LVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDMRGYGDSD 66 (323)
Q Consensus 26 ~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~ 66 (323)
++|.+-|.-++.-. -..++..|.++|++|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 46777777666443 367789999999999866555565554
No 397
>PRK05665 amidotransferase; Provisional
Probab=31.39 E-value=93 Score=24.30 Aligned_cols=37 Identities=22% Similarity=0.093 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 75 TIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
.-..++..+.++++..-...+-++|.|+|..+...+.
T Consensus 72 ~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 3445667777777765334456999999998776655
No 398
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=31.35 E-value=2.7e+02 Score=22.16 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=45.2
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCc-EEEeeCCCCCCCCCC-CCCCCCCcHHHHHHHHHHHHHHhCCccEEE-EE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGY-HVVAPDMRGYGDSDS-PQDPESYTIFHLVGDLIGLLDELGEEQAFV-VG 99 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~G~s~~-~~~~~~~~~~~~~~~i~~~l~~~~~~~~~l-vG 99 (323)
.+.||++--|...+.+.|...++.+.+.|- +++..+. |.|.. +......++..+ ..+-+..+ -++.+ .+
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~r---G~s~y~~~~~~~~dl~~i----~~lk~~~~-~pV~~ds~ 202 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCER---GIRTFEKATRNTLDLSAV----PVLKKETH-LPIIVDPS 202 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEC---CCCCCCCCCcCCcCHHHH----HHHHHhhC-CCEEEcCC
Confidence 467999999999999999999999988776 4555543 33322 111122232222 22222233 37777 79
Q ss_pred echH
Q 020621 100 HDWG 103 (323)
Q Consensus 100 ~S~G 103 (323)
||.|
T Consensus 203 Hs~G 206 (260)
T TIGR01361 203 HAAG 206 (260)
T ss_pred CCCC
Confidence 9988
No 399
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=31.35 E-value=1.6e+02 Score=22.49 Aligned_cols=38 Identities=13% Similarity=0.014 Sum_probs=22.7
Q ss_pred CCCeEEEEcccCCCchh-HHHHHHhhhhcCcE-EEeeCCC
Q 020621 23 QGPLVLLIHGFPELWSC-WKYQINHLAEHGYH-VVAPDMR 60 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~-~~~~~~~l~~~G~~-vi~~d~~ 60 (323)
.++.|++++-.+..... ...+.+.+.+.|++ +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 45778888766655433 34455566666763 5556554
No 400
>PRK05723 flavodoxin; Provisional
Probab=31.33 E-value=74 Score=22.69 Aligned_cols=60 Identities=18% Similarity=0.152 Sum_probs=31.8
Q ss_pred ccCCCchhHHHHHHhhhhc---CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEE
Q 020621 32 GFPELWSCWKYQINHLAEH---GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAF 96 (323)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~---G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 96 (323)
|-|..+..|..+.+.|.+. .+.=+.+-.-|.|.|... ..+-..++.+.+.+..+|.+++.
T Consensus 59 G~Ge~Pd~~~~f~~~L~~~~~~~l~~~~~aVfGLGDs~Y~-----~~Fc~a~~~ld~~L~~lGA~rv~ 121 (151)
T PRK05723 59 GMGELPDNLMPLYSAIRDQLPAAWRGLPGAVIALGDSSYG-----DTFCGGGEQMRELFAELGVREVQ 121 (151)
T ss_pred CCCCCchhHHHHHHHHHhcCccCCCCCEEEEEeEeCCcch-----HHHhHHHHHHHHHHHHCCCcEee
Confidence 4444566777776666542 111112222345555211 14556677777777777776554
No 401
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=31.27 E-value=72 Score=21.23 Aligned_cols=37 Identities=32% Similarity=0.379 Sum_probs=25.5
Q ss_pred EEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCC--CCCCCC
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDM--RGYGDS 65 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~--~G~G~s 65 (323)
+|+|-|.++++-+ .++..|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecceEEecccc
Confidence 5788898887653 345666665 899998887 444444
No 402
>PLN02748 tRNA dimethylallyltransferase
Probab=31.13 E-value=3.5e+02 Score=23.82 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=44.4
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCC----CCC--CCCC----------------CCCCCCCCcHHHHH
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDM----RGY--GDSD----------------SPQDPESYTIFHLV 80 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~ 80 (323)
.+.+|+|-|-.+++-+ .++..|+.+ +..||..|- +|. |... ..+ ...++..++.
T Consensus 21 ~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p-~e~ysv~~F~ 97 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISP-SVEFTAKDFR 97 (468)
T ss_pred CCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCC-CCcCcHHHHH
Confidence 3567777777666543 233344444 467888883 221 1111 112 2678999999
Q ss_pred HHHHHHHHHhC--CccEEEEEec
Q 020621 81 GDLIGLLDELG--EEQAFVVGHD 101 (323)
Q Consensus 81 ~~i~~~l~~~~--~~~~~lvG~S 101 (323)
++...+++.+. .+-.+|||-|
T Consensus 98 ~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 98 DHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHhcCCCeEEEcCh
Confidence 99999998762 2345666644
No 403
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=31.09 E-value=24 Score=25.86 Aligned_cols=46 Identities=15% Similarity=0.136 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhC-----ccccceeee
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFR-----PDRVKALVN 123 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl 123 (323)
++.+.+.++++.....-...+|-|||++.|+.++--. |+++-++..
T Consensus 82 ~Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yGi~k~~~~~K~~Gvf~ 132 (175)
T cd03131 82 DYWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYGIKKHQLPEKIFGVFP 132 (175)
T ss_pred chHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcCcccccCCCceEEEEE
Confidence 3455566666665544456889999999999887543 344544443
No 404
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=31.04 E-value=1.9e+02 Score=21.70 Aligned_cols=42 Identities=17% Similarity=0.079 Sum_probs=21.9
Q ss_pred CCeEEEEcccCCCchhH-HHHHHhhhh----cCcEEEeeCCCCCCCC
Q 020621 24 GPLVLLIHGFPELWSCW-KYQINHLAE----HGYHVVAPDMRGYGDS 65 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~-~~~~~~l~~----~G~~vi~~d~~G~G~s 65 (323)
.|.++++-..++.+..+ ..++..+.. ....++++|..|.+..
T Consensus 38 ~~h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~ 84 (205)
T PF01580_consen 38 NPHLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLA 84 (205)
T ss_dssp S-SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCG
T ss_pred CceEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccc
Confidence 34455444444444443 334455544 4689999999876544
No 405
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=30.77 E-value=2.2e+02 Score=20.94 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=41.2
Q ss_pred HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhCccccc
Q 020621 41 KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFRPDRVK 119 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~ 119 (323)
..+.+.|.+.||.|+-+- ... . +..++.+++..+...+..-..++ |.+.|...|-.+ +|.+.|. |+
T Consensus 16 ~~l~~~L~~~G~eV~D~G-----~~~--~--e~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~si---aANKv~G-IR 82 (171)
T PRK08622 16 MAVSDYLKSKGHEVIDVG-----TYD--F--TRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISN---AVNKVPG-IR 82 (171)
T ss_pred HHHHHHHHHCCCEEEEcC-----CCC--C--CCCChHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHH---HHhcCCC-eE
Confidence 456688999999885432 111 1 23467777777777775433344 334466666444 4556664 55
Q ss_pred eeeeec
Q 020621 120 ALVNLG 125 (323)
Q Consensus 120 ~lvl~~ 125 (323)
+.+..+
T Consensus 83 AA~~~d 88 (171)
T PRK08622 83 SALVRD 88 (171)
T ss_pred EEEeCC
Confidence 555444
No 406
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=30.76 E-value=73 Score=23.45 Aligned_cols=33 Identities=18% Similarity=0.117 Sum_probs=22.0
Q ss_pred EEEcccCCCchhH--HHHHHhhhhcCcEEEeeCCC
Q 020621 28 LLIHGFPELWSCW--KYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 28 v~~hG~~~~~~~~--~~~~~~l~~~G~~vi~~d~~ 60 (323)
.+..+-||.+.+. ..++..|+++|++|+.+|+-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 4455555554433 45678888899999999984
No 407
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=30.74 E-value=3.6e+02 Score=23.44 Aligned_cols=71 Identities=21% Similarity=0.215 Sum_probs=43.7
Q ss_pred HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc--cccee
Q 020621 44 INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD--RVKAL 121 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~l 121 (323)
.+.+...+|.++.+|-+|....+ +...+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~gi 244 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGV 244 (428)
T ss_pred HHHHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEE
Confidence 34444567999999998764321 2345556666665556667777666666666666655432 46666
Q ss_pred eee
Q 020621 122 VNL 124 (323)
Q Consensus 122 vl~ 124 (323)
|+-
T Consensus 245 IlT 247 (428)
T TIGR00959 245 VLT 247 (428)
T ss_pred EEe
Confidence 654
No 408
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=30.64 E-value=1.2e+02 Score=23.39 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=28.8
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYG 63 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G 63 (323)
+.+.....+.++......-++.|.++|..+++.|.-||.
T Consensus 152 ~~~a~asPy~~~~~~l~~Aa~~L~~~gadlIvLDCmGYt 190 (221)
T PF07302_consen 152 VVVAAASPYEGDEEELAAAARELAEQGADLIVLDCMGYT 190 (221)
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 334444445456667777789999999999999998765
No 409
>PRK09019 translation initiation factor Sui1; Validated
Probab=30.28 E-value=1.7e+02 Score=19.54 Aligned_cols=66 Identities=23% Similarity=0.146 Sum_probs=44.0
Q ss_pred eEEEeecC-CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHhCC
Q 020621 15 WMHIAEKG-QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTI-FHLVGDLIGLLDELGE 92 (323)
Q Consensus 15 ~~~~~~~g-~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~-~~~~~~i~~~l~~~~~ 92 (323)
++.....| .+..|-+|-|+.........++..|... -|+|.|-... ..-+ -|..+-+.++|...+.
T Consensus 34 ri~~~r~gRkGK~VTiI~Gl~~~~~dlk~l~K~lKkk---------~gcGGtvk~~---~IelQGD~r~~v~~~L~~~Gf 101 (108)
T PRK09019 34 RIQRQTSGRKGKGVCLITGLDLDDAELKKLAAELKKK---------CGCGGAVKDG---VIEIQGDKRDLLKSLLEAKGM 101 (108)
T ss_pred EEEEecCCCCCCeEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCCeEEcC---EEEEcCcHHHHHHHHHHHCCC
Confidence 44445555 4679999999998888888899998876 4566665432 1111 2445667777777665
No 410
>PRK06824 translation initiation factor Sui1; Validated
Probab=30.23 E-value=1.8e+02 Score=19.80 Aligned_cols=68 Identities=24% Similarity=0.194 Sum_probs=46.0
Q ss_pred eeEEEeecC-CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHhC
Q 020621 14 IWMHIAEKG-QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTI-FHLVGDLIGLLDELG 91 (323)
Q Consensus 14 ~~~~~~~~g-~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~-~~~~~~i~~~l~~~~ 91 (323)
.+|++...+ .+..|-+|-|+.........++..|... -|+|.|-... ..-+ -|..+.+.++|...+
T Consensus 43 vri~~~~kgr~gK~VTvI~Gl~~~~~dlk~l~K~LKkk---------~gcGGtvkd~---~IeiQGD~r~~v~~~L~~~G 110 (118)
T PRK06824 43 VRVRRETKGRGGKTVTVITGVPLAEDALKELAKELKRR---------CGTGGTLKDG---VIEIQGDHVELLLAELLKRG 110 (118)
T ss_pred EEEEEEEccCCCceEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCceEecC---EEEEcCcHHHHHHHHHHHCC
Confidence 455566665 5789999999998888888999999876 4566654322 1111 245566777777776
Q ss_pred Cc
Q 020621 92 EE 93 (323)
Q Consensus 92 ~~ 93 (323)
.+
T Consensus 111 ~~ 112 (118)
T PRK06824 111 FK 112 (118)
T ss_pred Ce
Confidence 53
No 411
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=30.09 E-value=2.6e+02 Score=21.68 Aligned_cols=71 Identities=23% Similarity=0.253 Sum_probs=30.8
Q ss_pred HHHHHhhhhc-CcEEEeeCCCCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 41 KYQINHLAEH-GYHVVAPDMRGYGDSDSPQDP------ESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 41 ~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
..+++..+++ |-.++.+-++ +|.|.....+ ...++..++.|+..-+...|.++++++..--|=.-++..+.
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~ 120 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAA 120 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHH
Confidence 3445555554 2134444443 5655443221 12244555556666666668999888844444332444443
No 412
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=30.01 E-value=75 Score=25.84 Aligned_cols=34 Identities=21% Similarity=0.049 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhCCccEEEEEechHHHHHHHHHhh
Q 020621 80 VGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 113 (323)
.+.+.++++.+.....-++|-|+|+++++.+.--
T Consensus 121 W~El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 3345555555443456799999999998877643
No 413
>PLN02154 carbonic anhydrase
Probab=29.96 E-value=76 Score=25.53 Aligned_cols=33 Identities=24% Similarity=0.138 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
....+...+.+++.+.|+++|||--|.+...+.
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 455677888899999999999998666655443
No 414
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=29.86 E-value=65 Score=28.14 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=32.7
Q ss_pred hhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccE-----EEEEechHHHHHHHHHhhC
Q 020621 48 AEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQA-----FVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 48 ~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~-----~lvG~S~Gg~~a~~~a~~~ 114 (323)
..+|.+|+++|--|.-.- ..-++..-+..+..+++ .+.|.|.||++|..+..++
T Consensus 413 kg~G~rILSiDGGGtrG~-------------~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 413 KGQGLRILSIDGGGTRGL-------------ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCCceEEEEecCCCccch-------------hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 456889999985432111 12223333334433443 3679999999999888653
No 415
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=29.84 E-value=65 Score=24.69 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=12.9
Q ss_pred HHhhhhcCcEEEeeCC
Q 020621 44 INHLAEHGYHVVAPDM 59 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~ 59 (323)
+..|+++|+.|+.+|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 3456778999999997
No 416
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=29.45 E-value=26 Score=11.47 Aligned_cols=6 Identities=33% Similarity=0.390 Sum_probs=3.0
Q ss_pred cCCCcc
Q 020621 291 RDAQHY 296 (323)
Q Consensus 291 ~~~gH~ 296 (323)
++-||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 344664
No 417
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=29.42 E-value=2.1e+02 Score=21.07 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=24.9
Q ss_pred CCeEEEEcccCC---CchhHHHHHHhhhhcCcEEEeeCC
Q 020621 24 GPLVLLIHGFPE---LWSCWKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 24 ~~~lv~~hG~~~---~~~~~~~~~~~l~~~G~~vi~~d~ 59 (323)
+.++++++.+.. .....+..+..|.+.|+.|+-++-
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 457888875543 233446667889999998887765
No 418
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=29.24 E-value=3.2e+02 Score=22.35 Aligned_cols=73 Identities=12% Similarity=0.235 Sum_probs=43.6
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCC----CC--CCCCC----------------CCCCCCCcHHHHHHHH
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR----GY--GDSDS----------------PQDPESYTIFHLVGDL 83 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~----G~--G~s~~----------------~~~~~~~~~~~~~~~i 83 (323)
.||+|-|-.+++-+ .++-.|++++-.||+.|-. |. |...+ .+ ...++..++.++.
T Consensus 5 ~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p-~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEP-IKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCC-CCceeHHHHHHHH
Confidence 46777777766543 2333444444478888853 21 11111 11 2678999999999
Q ss_pred HHHHHHh--CCccEEEEEec
Q 020621 84 IGLLDEL--GEEQAFVVGHD 101 (323)
Q Consensus 84 ~~~l~~~--~~~~~~lvG~S 101 (323)
.+.++.+ ..+..+++|-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 9999876 23345666644
No 419
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=29.03 E-value=3.2e+02 Score=22.28 Aligned_cols=85 Identities=12% Similarity=0.061 Sum_probs=53.6
Q ss_pred chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCcc
Q 020621 37 WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPD 116 (323)
Q Consensus 37 ~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 116 (323)
...+..+++.+.+.|..-+.+- |.+ ... ...+.++..+-+..+++..+.+-.+++|-+.+-.-+..++...-+
T Consensus 27 ~~~l~~li~~l~~~Gv~Gi~~~----Gst-GE~--~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~ 99 (303)
T PRK03620 27 EAAYREHLEWLAPYGAAALFAA----GGT-GEF--FSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAER 99 (303)
T ss_pred HHHHHHHHHHHHHcCCCEEEEC----cCC-cCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHH
Confidence 4456778888888888777653 222 222 467888888888888888765544555665444455555554322
Q ss_pred -ccceeeeecccC
Q 020621 117 -RVKALVNLGVAY 128 (323)
Q Consensus 117 -~v~~lvl~~~~~ 128 (323)
-+++++++.|.+
T Consensus 100 ~Gadav~~~pP~y 112 (303)
T PRK03620 100 AGADGILLLPPYL 112 (303)
T ss_pred hCCCEEEECCCCC
Confidence 467776655543
No 420
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=28.88 E-value=73 Score=29.29 Aligned_cols=78 Identities=23% Similarity=0.210 Sum_probs=47.5
Q ss_pred CCCeEEEEcccCCC----------chhHHHHHHhhhhcCcEEEeeCCCC---CCCCCCCCCCCCCc----HHHHHHHHHH
Q 020621 23 QGPLVLLIHGFPEL----------WSCWKYQINHLAEHGYHVVAPDMRG---YGDSDSPQDPESYT----IFHLVGDLIG 85 (323)
Q Consensus 23 ~~~~lv~~hG~~~~----------~~~~~~~~~~l~~~G~~vi~~d~~G---~G~s~~~~~~~~~~----~~~~~~~i~~ 85 (323)
++.+|++.|..... ...+..+++.|.++||++++++--= .|....+...-..| ..+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 45688889987542 3467888899999999999997321 12221111101122 2345566777
Q ss_pred HHHHhCCcc-EEEEEe
Q 020621 86 LLDELGEEQ-AFVVGH 100 (323)
Q Consensus 86 ~l~~~~~~~-~~lvG~ 100 (323)
+|+..+..- +.++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 888888763 445553
No 421
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.85 E-value=3e+02 Score=21.98 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=44.9
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCc-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEE-EEe
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGY-HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFV-VGH 100 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~l-vG~ 100 (323)
.+.||++--|..++.+.|...++.+...|- .++.. .||. +.. ..|...+.--.....++..-.-++.+ ..|
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~-~rG~--~t~----~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sH 205 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLC-ERGI--RTF----ETYTRNTLDLAAVAVIKELSHLPIIVDPSH 205 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEE-ECCC--CCC----CCCCHHHHHHHHHHHHHhccCCCEEEeCCC
Confidence 467999999999999999999998887766 45444 4553 111 12232222222223333332236666 699
Q ss_pred chH
Q 020621 101 DWG 103 (323)
Q Consensus 101 S~G 103 (323)
|.|
T Consensus 206 s~G 208 (266)
T PRK13398 206 ATG 208 (266)
T ss_pred ccc
Confidence 998
No 422
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=28.78 E-value=94 Score=24.09 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=21.2
Q ss_pred CCCeEEEEcccCCCc-----hhHHHHHHhhhhcCcEEEee
Q 020621 23 QGPLVLLIHGFPELW-----SCWKYQINHLAEHGYHVVAP 57 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~-----~~~~~~~~~l~~~G~~vi~~ 57 (323)
+++.|++.+|.+... +.|..+++.|.+.|+.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 346788888877643 34667788898888777765
No 423
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.63 E-value=57 Score=27.11 Aligned_cols=18 Identities=39% Similarity=0.359 Sum_probs=15.5
Q ss_pred EEEEechHHHHHHHHHhh
Q 020621 96 FVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~ 113 (323)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 466999999999999864
No 424
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=28.62 E-value=3.1e+02 Score=21.96 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=44.0
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhcCcEEE-eeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCcc
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEHGYHVV-APDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQ 94 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi-~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 94 (323)
.||| |.-+..-+.+....|.+.||..+ -+-+-|+|.. -.+ ...+.++.++.+.++.+.+|.++
T Consensus 50 ~iVF---WTKnp~P~l~~L~~l~~~gy~~yfq~Tit~Y~~~-lEp--~vP~~~~~i~~f~~Ls~~iG~~r 113 (266)
T PF08902_consen 50 CIVF---WTKNPAPFLPYLDELDERGYPYYFQFTITGYGKD-LEP--NVPPKDERIETFRELSERIGPER 113 (266)
T ss_pred EEEE---ecCCcHHHHhhHHHHHhCCCceEEEEEeCCCCcc-ccC--CCCCHHHHHHHHHHHHHHHCCCc
Confidence 5666 44444445566777888788644 4577788877 333 45678889999999999998764
No 425
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=28.60 E-value=1.4e+02 Score=23.13 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=33.7
Q ss_pred cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh--CCccEE--EEEechHHH-HHHHHHh
Q 020621 52 YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDEL--GEEQAF--VVGHDWGAQ-IAWNLCL 112 (323)
Q Consensus 52 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~--lvG~S~Gg~-~a~~~a~ 112 (323)
=-|..+|-+|...+.... ...+.....-+...+... ...|++ ++|++++|. ++.-+.+
T Consensus 66 pIv~lVD~~sQa~grreE---llGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREE---LLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CEEEEEeCCccccchHHH---HhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHh
Confidence 457788999988776543 445555544444433322 233544 569999665 5555544
No 426
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=28.56 E-value=1e+02 Score=16.30 Aligned_cols=19 Identities=16% Similarity=0.478 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhCCccEEEE
Q 020621 80 VGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lv 98 (323)
.+++..+++.+..++++++
T Consensus 20 ~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 20 REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp HHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEe
Confidence 4677788888876666665
No 427
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=28.50 E-value=1.3e+02 Score=24.19 Aligned_cols=43 Identities=12% Similarity=-0.017 Sum_probs=20.6
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecC
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRD 292 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
....|+.++||--|....+..+... .+.+.+..|+.-++.++=
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i--~~~i~~~~PG~yV~si~i 45 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSI--KELIEEQHPGTYVHSIEI 45 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHH--HHHHHHHSTT--EEE--S
T ss_pred CCCCcEEEEEcCccccCChhHHHHH--HHHHHHhCCCceEEEEEE
Confidence 4567999999999998776554333 245566778877766653
No 428
>PRK07053 glutamine amidotransferase; Provisional
Probab=28.05 E-value=2.9e+02 Score=21.50 Aligned_cols=32 Identities=22% Similarity=0.107 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCccEEEEEechHHHHHHHHH
Q 020621 80 VGDLIGLLDELGEEQAFVVGHDWGAQIAWNLC 111 (323)
Q Consensus 80 ~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 111 (323)
+....++++..-...+-++|.|+|..+.....
T Consensus 69 ~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 69 LAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 44555555544333456999999998877655
No 429
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=27.75 E-value=1.6e+02 Score=23.77 Aligned_cols=17 Identities=41% Similarity=0.522 Sum_probs=13.3
Q ss_pred CcEEEeeCCCCCCCCCCC
Q 020621 51 GYHVVAPDMRGYGDSDSP 68 (323)
Q Consensus 51 G~~vi~~d~~G~G~s~~~ 68 (323)
+-.+|++| ||||..++-
T Consensus 55 ~~~~IvID-pGHGG~DpG 71 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTG 71 (287)
T ss_pred CCeEEEEE-CCCCCCCCC
Confidence 45799999 899987643
No 430
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.72 E-value=60 Score=26.15 Aligned_cols=19 Identities=32% Similarity=0.336 Sum_probs=16.3
Q ss_pred EEEEechHHHHHHHHHhhC
Q 020621 96 FVVGHDWGAQIAWNLCLFR 114 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~~ 114 (323)
.++|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5679999999999998754
No 431
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=27.66 E-value=2.3e+02 Score=20.23 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=42.7
Q ss_pred HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhCccccc
Q 020621 41 KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFRPDRVK 119 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~ 119 (323)
..+.+.|.+.||.|+ |+ |..... ...++.+++..+...+..-..++ |.+.|...|-.+ .|.++|. |+
T Consensus 16 ~~l~~~L~~~g~eV~--D~---G~~~~~---~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~si---aANK~~G-IR 83 (148)
T PRK05571 16 EEIIEHLEELGHEVI--DL---GPDSYD---ASVDYPDYAKKVAEAVVAGEADRGILICGTGIGMSI---AANKVKG-IR 83 (148)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCCCC---CCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHH---HHhcCCC-eE
Confidence 345688999999885 43 211111 13466777777777765443444 445577777554 4557764 66
Q ss_pred eeeeec
Q 020621 120 ALVNLG 125 (323)
Q Consensus 120 ~lvl~~ 125 (323)
+.+..+
T Consensus 84 AA~~~d 89 (148)
T PRK05571 84 AALCHD 89 (148)
T ss_pred EEEECC
Confidence 555554
No 432
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.49 E-value=1.2e+02 Score=23.25 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=27.0
Q ss_pred CCCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCC
Q 020621 22 GQGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 60 (323)
++.|..|++-|.....- -..++.+|.+.||.|++--.+
T Consensus 4 ~~~~k~VlItgcs~GGI-G~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGI-GYALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcch-hHHHHHHHHhCCeEEEEEccc
Confidence 45677788877654433 346788999999999987654
No 433
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=27.45 E-value=1.3e+02 Score=23.61 Aligned_cols=34 Identities=32% Similarity=0.277 Sum_probs=27.0
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d 58 (323)
..|+++-|-|.+...=.-.+++|..+|++|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4677888888777766677899998999988775
No 434
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=27.42 E-value=2.4e+02 Score=20.31 Aligned_cols=46 Identities=30% Similarity=0.302 Sum_probs=27.7
Q ss_pred CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccE-EEEEechHHHHHH
Q 020621 51 GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQA-FVVGHDWGAQIAW 108 (323)
Q Consensus 51 G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~-~lvG~S~Gg~~a~ 108 (323)
|-.|++.|.+|- .++.+++++.+..+-+ .| +.+ .++|-|.|=.-++
T Consensus 67 ~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~-~G-~~i~f~IGG~~Gl~~~~ 113 (155)
T COG1576 67 GSYVVLLDIRGK----------ALSSEEFADFLERLRD-DG-RDISFLIGGADGLSEAV 113 (155)
T ss_pred CCeEEEEecCCC----------cCChHHHHHHHHHHHh-cC-CeEEEEEeCcccCCHHH
Confidence 568999998753 3445556665554443 34 444 4679888843333
No 435
>PRK09004 FMN-binding protein MioC; Provisional
Probab=27.39 E-value=1.8e+02 Score=20.55 Aligned_cols=6 Identities=17% Similarity=0.373 Sum_probs=2.7
Q ss_pred cEEEEE
Q 020621 94 QAFVVG 99 (323)
Q Consensus 94 ~~~lvG 99 (323)
++.++|
T Consensus 84 ~~aVfG 89 (146)
T PRK09004 84 RFAAIG 89 (146)
T ss_pred EEEEEe
Confidence 444444
No 436
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.32 E-value=79 Score=25.07 Aligned_cols=41 Identities=22% Similarity=0.085 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCccEE-EEEechHHHHHHHHHhhCccccceee
Q 020621 81 GDLIGLLDELGEEQAF-VVGHDWGAQIAWNLCLFRPDRVKALV 122 (323)
Q Consensus 81 ~~i~~~l~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lv 122 (323)
.-+.++++.- ..++. ++|.|+|+.-+..+.++.+.+-++++
T Consensus 28 GVLD~fl~a~-~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 28 GVLDEFLRAN-FNPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHHhc-cCCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 3344455332 23554 66999999999999988887666555
No 437
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.29 E-value=1.1e+02 Score=28.69 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=23.0
Q ss_pred HHHHHHHHHH---HhCCccEEEEEechHHHHHHHHHh
Q 020621 79 LVGDLIGLLD---ELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 79 ~~~~i~~~l~---~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
.-.++.+.+. ..+..--++.|.|.||..+..+|.
T Consensus 49 ~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 49 VYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 3344444444 334445578899999999998886
No 438
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=27.14 E-value=1.4e+02 Score=25.41 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=36.3
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCC
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS 65 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s 65 (323)
++.++|-+--+|.+...-....+.|.+.||.|+++.--|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 3457888888888877788888999999999999999999854
No 439
>PF09695 YtfJ_HI0045: Bacterial protein of unknown function (YtfJ_HI0045); InterPro: IPR006513 These are sequences from gammaproteobacteria that are related to the Escherichia coli protein, YtfJ.
Probab=27.05 E-value=1.5e+02 Score=21.37 Aligned_cols=45 Identities=13% Similarity=0.060 Sum_probs=31.6
Q ss_pred eEEEECCeeEEEeecCC----CCeEEEEc--ccCCCchhHHHHHHhhhhcC
Q 020621 7 RRVHTNGIWMHIAEKGQ----GPLVLLIH--GFPELWSCWKYQINHLAEHG 51 (323)
Q Consensus 7 ~~~~~~g~~~~~~~~g~----~~~lv~~h--G~~~~~~~~~~~~~~l~~~G 51 (323)
..+.++|..+.|..+.+ |.+-|+.| |-....+...++++.+.++.
T Consensus 16 Gel~l~~~~~~y~~W~s~~l~GKVrviq~iAGr~sake~N~~l~~aik~a~ 66 (160)
T PF09695_consen 16 GELILNGDKISYQPWNSAQLPGKVRVIQHIAGRSSAKEMNAPLIEAIKAAK 66 (160)
T ss_pred ceEEEcCCcccccccCccccCCCEEEEEEeccCCchhHhhHHHHHHHHHcC
Confidence 45666888889998873 55555555 55566778888888887653
No 440
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=26.96 E-value=3.7e+02 Score=22.32 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=23.7
Q ss_pred CCcHHHHHHHHHHHHHHhC-CccEEEEEechHHHH
Q 020621 73 SYTIFHLVGDLIGLLDELG-EEQAFVVGHDWGAQI 106 (323)
Q Consensus 73 ~~~~~~~~~~i~~~l~~~~-~~~~~lvG~S~Gg~~ 106 (323)
.-+..+.++.+...++... ..+++|+=|+.-|..
T Consensus 116 ~~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 116 PKSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred cCCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 3355666666666666554 568999999997765
No 441
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=26.69 E-value=75 Score=24.26 Aligned_cols=16 Identities=31% Similarity=0.569 Sum_probs=13.1
Q ss_pred HHhhhhcCcEEEeeCC
Q 020621 44 INHLAEHGYHVVAPDM 59 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~ 59 (323)
+..|+++|+.|+.+|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 3457788999999997
No 442
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=26.67 E-value=3.1e+02 Score=22.47 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=36.3
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCC------CCCCCCC---------------CCCCCCcHHHHHHH
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRG------YGDSDSP---------------QDPESYTIFHLVGD 82 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G------~G~s~~~---------------~~~~~~~~~~~~~~ 82 (323)
+.+|++-|-.+++-+ .++..|++. +..++..|-.- +|...+. .....++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 467777777766543 334444443 45677777631 1111110 00145788888888
Q ss_pred HHHHHHHh
Q 020621 83 LIGLLDEL 90 (323)
Q Consensus 83 i~~~l~~~ 90 (323)
....++..
T Consensus 82 a~~~i~~i 89 (307)
T PRK00091 82 ALAAIADI 89 (307)
T ss_pred HHHHHHHH
Confidence 88888765
No 443
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.62 E-value=1e+02 Score=22.10 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCccEEEEEechHHHHHHH
Q 020621 79 LVGDLIGLLDELGEEQAFVVGHDWGAQIAWN 109 (323)
Q Consensus 79 ~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~ 109 (323)
....+...+..++.+.++++|||--|.+...
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a~ 108 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAAA 108 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHHH
Confidence 5666778888899999999999996665543
No 444
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=26.52 E-value=42 Score=28.53 Aligned_cols=68 Identities=9% Similarity=0.049 Sum_probs=36.3
Q ss_pred ccccceEEEecCCCCCCCCcCccccccchhhhhcCCCceEEEecCCCccc---chhchHHHHHHHHHHhhhccc
Q 020621 248 KICVPTKFIIGDKHMGFKSFGTENYIKGDEFKTLVPDLEVVVIRDAQHYI---QLEKAEQITEEILSHFRKKSI 318 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~~ 318 (323)
.-..|++++.|.-|.+-+--. ..+ ...+..+.=..=.+.+||.|+.. .-++.+.+.+.+.+||...+.
T Consensus 187 ~~p~P~VIv~gGlDs~qeD~~--~l~-~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~ 257 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQEDLY--RLF-RDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPW 257 (411)
T ss_dssp SS-EEEEEEE--TTS-GGGGH--HHH-HCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTT
T ss_pred CCCCCEEEEeCCcchhHHHHH--HHH-HHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCc
Confidence 557799999999998764211 000 01122222223455668888864 334556888999999988754
No 445
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.33 E-value=65 Score=21.70 Aligned_cols=22 Identities=32% Similarity=0.530 Sum_probs=18.8
Q ss_pred hHHHHHHhhhhcCcEEEeeCCC
Q 020621 39 CWKYQINHLAEHGYHVVAPDMR 60 (323)
Q Consensus 39 ~~~~~~~~l~~~G~~vi~~d~~ 60 (323)
.+...+..|+++||.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4667789999999999999974
No 446
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=26.23 E-value=2e+02 Score=23.04 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=34.4
Q ss_pred eEEEEcccCCCchhH--HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH-HhCCccEEEE
Q 020621 26 LVLLIHGFPELWSCW--KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLD-ELGEEQAFVV 98 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~--~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~~lv 98 (323)
|||++-|+++++-.. ..+.+.|.+.++.|+.++--..+.....-. ........-..+...++ .+..+.++++
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y~-~~~~Ek~~R~~l~s~v~r~ls~~~iVI~ 76 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDYA-DSKKEKEARGSLKSAVERALSKDTIVIL 76 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS---GGGHHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhhh-chhhhHHHHHHHHHHHHHhhccCeEEEE
Confidence 689999999986653 345577777788998887544442211110 12233334444444443 3454555554
No 447
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
Probab=26.09 E-value=3.6e+02 Score=21.87 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=47.7
Q ss_pred CeEEEE-cccCCCchhHHHHHHhhhhcCcEEEee-CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE
Q 020621 25 PLVLLI-HGFPELWSCWKYQINHLAEHGYHVVAP-DMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV 98 (323)
Q Consensus 25 ~~lv~~-hG~~~~~~~~~~~~~~l~~~G~~vi~~-d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv 98 (323)
|.+|=+ +|+|. ...-...+..+.+.|-.-+.+ |.-+--...+.+...-++.+++++-|.++.+.-....++++
T Consensus 80 Pv~vD~dtGfG~-~~nvartV~~~~~aG~agi~iEDq~~pk~cgh~~gk~l~~~~e~v~rIkAa~~a~~~~~fvi~ 154 (289)
T COG2513 80 PVLVDIDTGFGE-ALNVARTVRELEQAGAAGIHIEDQVGPKRCGHLPGKELVSIDEMVDRIKAAVEARRDPDFVII 154 (289)
T ss_pred ceEEeccCCCCc-HHHHHHHHHHHHHcCcceeeeeecccchhcCCCCCCCcCCHHHHHHHHHHHHHhccCCCeEEE
Confidence 555555 56666 666666777787777665555 66553222232323578999999999999987755566665
No 448
>PF13728 TraF: F plasmid transfer operon protein
Probab=25.37 E-value=1.9e+02 Score=22.17 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=33.1
Q ss_pred eEEEEcccCCCchhHHHHHHhhhhc-CcEEEeeCCCCCCCCCCC
Q 020621 26 LVLLIHGFPELWSCWKYQINHLAEH-GYHVVAPDMRGYGDSDSP 68 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~ 68 (323)
.++|.-|.+.-.....++++.|++. |+.|+.++.-|.+...-+
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp 167 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFP 167 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCC
Confidence 5566667666677788888888766 999999999888877443
No 449
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=25.35 E-value=75 Score=34.61 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=24.4
Q ss_pred HHHHHHHhCCccEEEEEechHHHHHHHHHh
Q 020621 83 LIGLLDELGEEQAFVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~ 112 (323)
+.++++..|+++-.++|||+|=+.|+.++.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 345667789999999999999998887763
No 450
>PTZ00445 p36-lilke protein; Provisional
Probab=25.00 E-value=2.9e+02 Score=21.26 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=19.1
Q ss_pred hhHHHHHHhhhhcCcEEEeeCCCC
Q 020621 38 SCWKYQINHLAEHGYHVVAPDMRG 61 (323)
Q Consensus 38 ~~~~~~~~~l~~~G~~vi~~d~~G 61 (323)
+.-..+.+.|.+.|..+++.|+-.
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~Dn 52 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDL 52 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchh
Confidence 344566788999999999999964
No 451
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=24.98 E-value=80 Score=26.23 Aligned_cols=19 Identities=16% Similarity=0.072 Sum_probs=15.5
Q ss_pred EEEEEechHHHHHHHHHhh
Q 020621 95 AFVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 95 ~~lvG~S~Gg~~a~~~a~~ 113 (323)
-.++|||+|=..|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3579999999988887754
No 452
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=24.91 E-value=98 Score=25.65 Aligned_cols=15 Identities=13% Similarity=0.100 Sum_probs=13.5
Q ss_pred ccccceEEEecCCCC
Q 020621 248 KICVPTKFIIGDKHM 262 (323)
Q Consensus 248 ~~~~Pvl~i~G~~D~ 262 (323)
.+++|+.+++...|.
T Consensus 267 ~irtP~F~vN~afD~ 281 (402)
T KOG4287|consen 267 TIRTPVFLVNAAFDS 281 (402)
T ss_pred hcCCceEehhhhhhH
Confidence 789999999998886
No 453
>PRK13753 dihydropteroate synthase; Provisional
Probab=24.66 E-value=3e+02 Score=22.23 Aligned_cols=58 Identities=21% Similarity=0.259 Sum_probs=30.6
Q ss_pred hhhcCc--EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHH
Q 020621 47 LAEHGY--HVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNL 110 (323)
Q Consensus 47 l~~~G~--~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~ 110 (323)
+.+.|. .=|.+| ||.|...... ...++ ++...+..+...+ ...+|+|+|-=+++.-.+
T Consensus 160 ~~~~Gi~~~~IilD-PGiGF~k~k~--~~~n~-~ll~~l~~l~~~~--g~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 160 LRRSGVAADRLILD-PGMGFFLSPA--PETSL-HVLSNLQKLKSAL--GLPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHcCCChhhEEEe-CCCCCCCCCC--hHHHH-HHHHhHHHHHHhC--CCceEEEccHhHHHHHHc
Confidence 444565 357888 7998732111 11111 2233333332223 456899999988876443
No 454
>PRK07933 thymidylate kinase; Validated
Probab=24.40 E-value=2e+02 Score=21.96 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=28.3
Q ss_pred EEEEcccCCCch--hHHHHHHhhhhcCcEEEeeCCCCCCCC
Q 020621 27 VLLIHGFPELWS--CWKYQINHLAEHGYHVVAPDMRGYGDS 65 (323)
Q Consensus 27 lv~~hG~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G~s 65 (323)
+|.+=|.-+++- .-..+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 455666666543 345667889889999999999977754
No 455
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.30 E-value=1.3e+02 Score=23.63 Aligned_cols=18 Identities=33% Similarity=0.429 Sum_probs=15.9
Q ss_pred EEEEechHHHHHHHHHhh
Q 020621 96 FVVGHDWGAQIAWNLCLF 113 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~~ 113 (323)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 467999999999999876
No 456
>PRK08105 flavodoxin; Provisional
Probab=23.96 E-value=1.3e+02 Score=21.33 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=11.8
Q ss_pred cHHHHHHHHHHHHHHhCCccE
Q 020621 75 TIFHLVGDLIGLLDELGEEQA 95 (323)
Q Consensus 75 ~~~~~~~~i~~~l~~~~~~~~ 95 (323)
.+-..+..+.+.+..+|.+++
T Consensus 99 ~fc~~~~~ld~~l~~lGa~~v 119 (149)
T PRK08105 99 NFCGAGKQFDALLQEQGAKRV 119 (149)
T ss_pred HHHHHHHHHHHHHHHCCCeEe
Confidence 344555666666666655543
No 457
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.82 E-value=1.5e+02 Score=24.21 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhC----CccEEEEEec--hHHHHHHHHHhh
Q 020621 80 VGDLIGLLDELG----EEQAFVVGHD--WGAQIAWNLCLF 113 (323)
Q Consensus 80 ~~~i~~~l~~~~----~~~~~lvG~S--~Gg~~a~~~a~~ 113 (323)
...+.+++++.+ .+++.++|-| ||-.+|..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 455667777664 3589999997 899999988864
No 458
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=23.78 E-value=2e+02 Score=20.68 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=31.8
Q ss_pred CcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHHHHHhhCccccceeeeecccCCC
Q 020621 51 GYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAWNLCLFRPDRVKALVNLGVAYMP 130 (323)
Q Consensus 51 G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 130 (323)
+-.++++|-.| ..++-.++++.+..+...-..+=+.++|-|.|= .-.+-. +.+..+.+++...+
T Consensus 67 ~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~--~~~~~~----~a~~~lSLS~mTfp 130 (155)
T PF02590_consen 67 NDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADGL--SEEVRK----RADEKLSLSKMTFP 130 (155)
T ss_dssp TSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB----HHHHH----H-SEEEES-SS---
T ss_pred CCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCceEEEEEecCCCC--CHHHHh----hcCceEEEecCCCc
Confidence 46788999764 345667777777777665222335577999982 222222 23455566655443
No 459
>PRK05920 aromatic acid decarboxylase; Validated
Probab=23.69 E-value=3.3e+02 Score=20.71 Aligned_cols=62 Identities=24% Similarity=0.163 Sum_probs=34.4
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH-HHHHHHhCCc
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDL-IGLLDELGEE 93 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i-~~~l~~~~~~ 93 (323)
+.++|+++-.......-...+..|.+.|+.|+-++.--++ ...+.+++++-+ ..+++.+|++
T Consensus 130 ~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii~P~~g~y~--------~p~~~~~~~~f~~~~~l~~lg~~ 192 (204)
T PRK05920 130 RRKLILVPRETPLSLIHLENMLKLAEAGAIILPAIPAFYH--------KPQTIDDLVDFVVARILDLLGID 192 (204)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEeCCcccccC--------CCCCHHHHHHHHHHHHHHhcCCC
Confidence 3566777642222223355567788888887665432112 223556666644 3577777754
No 460
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=23.65 E-value=4.6e+02 Score=22.27 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=46.1
Q ss_pred EEEEcccCCCchhHHHHHHhhhhcC--cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHH
Q 020621 27 VLLIHGFPELWSCWKYQINHLAEHG--YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGA 104 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~~G--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg 104 (323)
.+++.|...+.+....+++.+.+.. .+.|-+.. .+.+.. .....+.++.+.+.+...|+. +.+..|.|.
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~--~~~~~~-----~~ps~e~i~~F~~~L~~~Gi~--vtvR~~~G~ 353 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNS--IVNIKF-----EPVCSSTRERFRDRLLDAGLQ--VTVRKSYGT 353 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeecc--CCCCCC-----CCCCHHHHHHHHHHHHHCCCc--EEeeCCCCc
Confidence 5788999988777777777776542 34444433 232221 112344566667777766654 678899997
Q ss_pred HHHHHH
Q 020621 105 QIAWNL 110 (323)
Q Consensus 105 ~~a~~~ 110 (323)
-+....
T Consensus 354 di~aAC 359 (368)
T PRK14456 354 TINAAC 359 (368)
T ss_pred chhhcC
Confidence 665543
No 461
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=23.62 E-value=1.5e+02 Score=18.22 Aligned_cols=18 Identities=28% Similarity=0.263 Sum_probs=14.9
Q ss_pred HHHHHhhhhcCcEEEeeC
Q 020621 41 KYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d 58 (323)
..++..|++.|+++..+|
T Consensus 17 ~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 17 ANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHCCCeEEEEC
Confidence 456678888899999999
No 462
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=23.61 E-value=4.6e+02 Score=22.25 Aligned_cols=64 Identities=20% Similarity=0.118 Sum_probs=38.0
Q ss_pred CeEEEEcccCC--CchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEE
Q 020621 25 PLVLLIHGFPE--LWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVG 99 (323)
Q Consensus 25 ~~lv~~hG~~~--~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG 99 (323)
..++++.|-.. ....+..+...|.+.|..+..+|-- .. . ...+.++.+.+.++..+.+-++-+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v----~~-~------p~~~~v~~~~~~~~~~~~D~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV----EP-N------PTTTTVMEGAALAREEGCDFVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc----cC-C------CCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 45677776543 3456677888888888888777521 11 1 1134455565666666666555554
No 463
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=23.56 E-value=1.6e+02 Score=17.80 Aligned_cols=11 Identities=36% Similarity=0.618 Sum_probs=8.5
Q ss_pred CCeEEEEcccC
Q 020621 24 GPLVLLIHGFP 34 (323)
Q Consensus 24 ~~~lv~~hG~~ 34 (323)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 46788888877
No 464
>PF07380 Pneumo_M2: Pneumovirus M2 protein; InterPro: IPR009969 This family consists of several Pneumovirus M2 proteins. The M2-1 protein of respiratory syncytial virus (RSV) is a transcription processivity factor that is essential for virus replication [].
Probab=23.48 E-value=1.1e+02 Score=18.72 Aligned_cols=22 Identities=23% Similarity=0.293 Sum_probs=19.7
Q ss_pred CCCcHHHHHHHHHHHHHHhCCc
Q 020621 72 ESYTIFHLVGDLIGLLDELGEE 93 (323)
Q Consensus 72 ~~~~~~~~~~~i~~~l~~~~~~ 93 (323)
-.|+..++++++..++.++|..
T Consensus 58 IhWTsq~Lid~~q~fLqhlgis 79 (89)
T PF07380_consen 58 IHWTSQDLIDATQNFLQHLGIS 79 (89)
T ss_pred hccchHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999875
No 465
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=23.27 E-value=2.1e+02 Score=22.11 Aligned_cols=79 Identities=24% Similarity=0.208 Sum_probs=41.8
Q ss_pred HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc--cEEEEEechHHH----HHHHHHhhCccc
Q 020621 44 INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE--QAFVVGHDWGAQ----IAWNLCLFRPDR 117 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~--~~~lvG~S~Gg~----~a~~~a~~~p~~ 117 (323)
++.|.+.+..|+++|+-|--..-+.--....+.+++.+.+ .++++.+.+ +-+.+|-+.|+. =|+.+...++
T Consensus 103 ~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l-~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~-- 179 (275)
T COG1856 103 LEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSL-LLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE-- 179 (275)
T ss_pred HHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHH-HHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC--
Confidence 3455566678888888643221110000122334443333 233444443 667889999985 4566666554
Q ss_pred cceeeeec
Q 020621 118 VKALVNLG 125 (323)
Q Consensus 118 v~~lvl~~ 125 (323)
.+++|+..
T Consensus 180 ~DalVl~v 187 (275)
T COG1856 180 PDALVLVV 187 (275)
T ss_pred CCeEEEEE
Confidence 45566555
No 466
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=23.16 E-value=2.3e+02 Score=26.29 Aligned_cols=42 Identities=7% Similarity=0.087 Sum_probs=28.8
Q ss_pred cEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEe
Q 020621 52 YHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGH 100 (323)
Q Consensus 52 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~ 100 (323)
+..-.+-.||||++ .+++++.+..|.+...++..-++.++|.
T Consensus 630 ~kte~isCPgCGRT-------~~dlq~~~~~I~~~~~hl~GvkiavMGC 671 (733)
T PLN02925 630 TKTEYVSCPSCGRT-------LFDLQEVSAEIREKTSHLPGVSIAIMGC 671 (733)
T ss_pred cCCeEEECCCCCCc-------cccHHHHHHHHHHHhhcCCCceEEEEee
Confidence 33444556888876 3458888888888877775557777664
No 467
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.08 E-value=1.5e+02 Score=24.48 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=24.8
Q ss_pred CCeEEEEcc-cCCC-----chhHHHHHHhhhhcCcEEEee
Q 020621 24 GPLVLLIHG-FPEL-----WSCWKYQINHLAEHGYHVVAP 57 (323)
Q Consensus 24 ~~~lv~~hG-~~~~-----~~~~~~~~~~l~~~G~~vi~~ 57 (323)
+|.|++.|| ..+. .+.|..+++.|.++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 478888888 3322 346788889998888777776
No 468
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=23.07 E-value=4.4e+02 Score=21.92 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=49.5
Q ss_pred CCCeEEEEcccCCCchhHHHHHHhhhhcCcE---EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEE
Q 020621 23 QGPLVLLIHGFPELWSCWKYQINHLAEHGYH---VVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVG 99 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG 99 (323)
.+.||++--|+ .+-..|...++.+.+.|.. ++.+..- |..+......++. .+..+-+..+ -++.+-+
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC~----s~YP~~~~~~nL~----~I~~Lk~~f~-~pVG~Sd 201 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHCT----TEYPAPFEDVNLN----AMDTLKEAFD-LPVGYSD 201 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEEC----CCCCCCcccCCHH----HHHHHHHHhC-CCEEECC
Confidence 46789999998 5788899889999887764 6555532 2222211233322 2222223333 4777789
Q ss_pred echHHHHHHHHHhhC
Q 020621 100 HDWGAQIAWNLCLFR 114 (323)
Q Consensus 100 ~S~Gg~~a~~~a~~~ 114 (323)
||.|-.++....+.-
T Consensus 202 Ht~G~~~~~aAvalG 216 (329)
T TIGR03569 202 HTLGIEAPIAAVALG 216 (329)
T ss_pred CCccHHHHHHHHHcC
Confidence 999976665555443
No 469
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=22.99 E-value=5.1e+02 Score=22.53 Aligned_cols=78 Identities=9% Similarity=0.060 Sum_probs=46.3
Q ss_pred chhHHHHHHhhhh-cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEE-EechHHHHHHHHHhhC
Q 020621 37 WSCWKYQINHLAE-HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVV-GHDWGAQIAWNLCLFR 114 (323)
Q Consensus 37 ~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lv-G~S~Gg~~a~~~a~~~ 114 (323)
...+...+..+.+ .++.++.+|-+|.-.. -....+.+.++++......++|+ .-++++.-+...+..+
T Consensus 305 ~~~L~~aL~~lk~~~~~DvVLIDTaGRs~k----------d~~lm~EL~~~lk~~~PdevlLVLsATtk~~d~~~i~~~F 374 (436)
T PRK11889 305 EAAMTRALTYFKEEARVDYILIDTAGKNYR----------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNF 374 (436)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCccccCc----------CHHHHHHHHHHHhhcCCCeEEEEECCccChHHHHHHHHHh
Confidence 3344444555553 3689999998876321 12456666777766555556665 2345666666666655
Q ss_pred cc-ccceeeee
Q 020621 115 PD-RVKALVNL 124 (323)
Q Consensus 115 p~-~v~~lvl~ 124 (323)
.. .+.++|+-
T Consensus 375 ~~~~idglI~T 385 (436)
T PRK11889 375 KDIHIDGIVFT 385 (436)
T ss_pred cCCCCCEEEEE
Confidence 33 56777754
No 470
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=22.86 E-value=5.2e+02 Score=22.61 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=27.1
Q ss_pred CCCeEEEEcccCCCchh--HHHHHHhhhhcCcEEEeeCC
Q 020621 23 QGPLVLLIHGFPELWSC--WKYQINHLAEHGYHVVAPDM 59 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~--~~~~~~~l~~~G~~vi~~d~ 59 (323)
..|.++++-|..|++-+ -..++..|.+.|++|..++.
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~ 131 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAA 131 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecC
Confidence 35777777788777544 35667788888999988876
No 471
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=22.72 E-value=3.2e+02 Score=24.15 Aligned_cols=72 Identities=17% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCeEEEEcccCCCch---hHHHHHHhhhhcCcEEEeeCCC-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEE
Q 020621 24 GPLVLLIHGFPELWS---CWKYQINHLAEHGYHVVAPDMR-GYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAF 96 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~---~~~~~~~~l~~~G~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 96 (323)
+.-+++++|-..+.. .-......|.+.|+.+..++-. -+|.... ...........++...+.++..+.+.++
T Consensus 260 ~~~v~~f~GC~~~~~~~~~~~a~~~vL~~~G~~~~~~~~~~CCG~p~~-~~G~~~~~~~~~~~ni~~~~~~~~~~IV 335 (486)
T PRK06259 260 KLRVAFFTGCLVDYRLQEVGKDAIRVLNAHGISVIIPKNQVCCGSPLI-RTGQTDVAEELKKKNLEIFNKLDVDTVV 335 (486)
T ss_pred CeEEEEECCccccccchHHHHHHHHHHHHCCCeEecCCCCCcccHHHH-hcCCHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 446888888654432 2234457788889999876432 2333211 1112234555666666677766765533
No 472
>cd06296 PBP1_CatR_like Ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group includes the ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group belongs to the the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=22.62 E-value=3.7e+02 Score=20.86 Aligned_cols=58 Identities=22% Similarity=0.090 Sum_probs=26.8
Q ss_pred HHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechH
Q 020621 44 INHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWG 103 (323)
Q Consensus 44 ~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~G 103 (323)
.+.+.+.|..|+++|......+..+. -..+.......+...+-..+.+++.+++...+
T Consensus 71 ~~~~~~~~ipvV~i~~~~~~~~~~~~--v~~d~~~~~~~a~~~l~~~g~~~i~~i~~~~~ 128 (270)
T cd06296 71 RAALRRTGIPFVVVDPAGDPDADVPS--VGATNWAGGLAATEHLLELGHRRIGFITGPPD 128 (270)
T ss_pred HHHHhcCCCCEEEEecccCCCCCCCE--EEeCcHHHHHHHHHHHHHcCCCcEEEEcCCCc
Confidence 45566667888888765322111110 11122223333333333345566666654443
No 473
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=22.50 E-value=2e+02 Score=19.55 Aligned_cols=13 Identities=31% Similarity=0.542 Sum_probs=10.2
Q ss_pred HhhhhcCcEEEee
Q 020621 45 NHLAEHGYHVVAP 57 (323)
Q Consensus 45 ~~l~~~G~~vi~~ 57 (323)
..|.+.|+.|+.+
T Consensus 101 ~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 101 SRLQELGWRVLRV 113 (117)
T ss_pred HHHHHCcCEEEEE
Confidence 5577889999876
No 474
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=22.36 E-value=2.9e+02 Score=19.58 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=41.3
Q ss_pred HHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCcc-EEEEEechHHHHHHHHHhhCccccc
Q 020621 41 KYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQ-AFVVGHDWGAQIAWNLCLFRPDRVK 119 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~ 119 (323)
..+...|.+.||.|+=+-. + . . ...++.+++..+...+..-..++ |.+.|.-.|-.+ .|.++|. |+
T Consensus 15 ~~l~~~L~~~g~eV~D~G~--~---~--~--~~~dYpd~a~~va~~V~~~~~~~GIliCGtGiG~si---aANK~~G-Ir 81 (143)
T TIGR01120 15 EEIKAFLVERGVKVIDKGT--W---S--S--ERTDYPHYAKQVALAVAGGEVDGGILICGTGIGMSI---AANKFAG-IR 81 (143)
T ss_pred HHHHHHHHHCCCEEEEeCC--C---C--C--CCCCHHHHHHHHHHHHHCCCCceEEEEcCCcHHHHH---HHhcCCC-eE
Confidence 3456788899998853321 1 1 1 23567778887777775433444 334466666444 4556764 55
Q ss_pred eeeeec
Q 020621 120 ALVNLG 125 (323)
Q Consensus 120 ~lvl~~ 125 (323)
+.+..+
T Consensus 82 aa~~~d 87 (143)
T TIGR01120 82 AALCSE 87 (143)
T ss_pred EEEECC
Confidence 555444
No 475
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=22.35 E-value=2.3e+02 Score=23.78 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=37.1
Q ss_pred CeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 25 PLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 25 ~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
.++|.+.|.-.|+- .+-.|.++||.|+.+-+..+..+.. ......+...|...+.+.+|+
T Consensus 5 kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 5 KVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred EEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCC
Confidence 35555555444422 1345777899999999887765111 234555666777777777765
No 476
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=22.32 E-value=4.1e+02 Score=21.27 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=35.1
Q ss_pred eEEEEcccCCC-chhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCc
Q 020621 26 LVLLIHGFPEL-WSCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEE 93 (323)
Q Consensus 26 ~lv~~hG~~~~-~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 93 (323)
.++++ |.+|+ ..+-..++..+. ++.++-++.. ..|+..++-+|++.++...|.+
T Consensus 33 h~LLv-G~~GsGr~sl~rLaa~i~--~~~~~~i~~~-----------~~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 33 HALLV-GVGGSGRQSLARLAAFIC--GYEVFQIEIT-----------KGYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp EEEEE-CTTTSCHHHHHHHHHHHT--TEEEE-TTTS-----------TTTHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEe-cCCCccHHHHHHHHHHHh--ccceEEEEee-----------CCcCHHHHHHHHHHHHHHHhcc
Confidence 34444 44443 444555666655 4888888752 5689999999999998876544
No 477
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.14 E-value=47 Score=28.88 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=25.3
Q ss_pred CCccEEEEEechHHHHHHHHHhhCccccceee
Q 020621 91 GEEQAFVVGHDWGAQIAWNLCLFRPDRVKALV 122 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 122 (323)
++=|-++.|-|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 33466789999999999999988776666654
No 478
>PRK06849 hypothetical protein; Provisional
Probab=22.14 E-value=3.2e+02 Score=23.19 Aligned_cols=61 Identities=10% Similarity=0.042 Sum_probs=38.1
Q ss_pred HHHHHHhhhhcCcEEEeeCCCCCCCCCC---CC-----CCCCCcHHHHHHHHHHHHHHhCCccEEEEEec
Q 020621 40 WKYQINHLAEHGYHVVAPDMRGYGDSDS---PQ-----DPESYTIFHLVGDLIGLLDELGEEQAFVVGHD 101 (323)
Q Consensus 40 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~---~~-----~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S 101 (323)
-..+++.|.+.|++|++.|......+.. .. .....+.+++++.+.++++..+. .+++-+.+
T Consensus 17 ~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i-d~vIP~~e 85 (389)
T PRK06849 17 ALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI-DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC-CEEEECCh
Confidence 3567788999999999998864332210 00 01233556788888888887764 33344444
No 479
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=21.79 E-value=4e+02 Score=20.93 Aligned_cols=66 Identities=18% Similarity=0.089 Sum_probs=35.6
Q ss_pred EEEEcccCCCchhHHHHHHhhhh--cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 020621 27 VLLIHGFPELWSCWKYQINHLAE--HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE 92 (323)
Q Consensus 27 lv~~hG~~~~~~~~~~~~~~l~~--~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~ 92 (323)
+.+..-...+.......+..+.. .+..++.+|+-+.=.+..........+...+..+.++.+.++.
T Consensus 104 l~i~~~~~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i 171 (259)
T PF03796_consen 104 LYIEDTPSLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNI 171 (259)
T ss_dssp EEEEESSS-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 44444333455555555555543 3678999998765333222211233455666677777776665
No 480
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=21.68 E-value=3.4e+02 Score=20.54 Aligned_cols=68 Identities=12% Similarity=0.043 Sum_probs=34.8
Q ss_pred CCeEEEEcccCCCchhH--HHHHHhhhh-cCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEE
Q 020621 24 GPLVLLIHGFPELWSCW--KYQINHLAE-HGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAF 96 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~--~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 96 (323)
+.++|+++.+.. .+| ...+..|.+ .|+.++-+ |...+.+.+..-...++-+.+.+.+.++...++|+.
T Consensus 121 ~~PvvlaPAMN~--~M~~~~~ni~~L~~~~g~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (196)
T PRK08305 121 QRPVVLAISTND--ALGLNAKNLGRLLNTKNIYFVPF---GQDDPVKKPNSLVARMDLLIDTVEEALEGKQLQPVL 191 (196)
T ss_pred CCCEEEEECCCH--HHHhCHHHHHHHHhcCCEEEEec---CCCCCCCCchhHHhhHHhhHHHHHHHHhCCccccee
Confidence 457888877543 344 355666764 56666533 222222222112224445555566666655665654
No 481
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=21.54 E-value=1.1e+02 Score=28.24 Aligned_cols=77 Identities=19% Similarity=0.190 Sum_probs=44.5
Q ss_pred CCCeEEEEcccCCC----------chhHHHHHHhhhhcCcEEEeeCCCC---CCCCCCCCCCCCCcHH----HHHHHHHH
Q 020621 23 QGPLVLLIHGFPEL----------WSCWKYQINHLAEHGYHVVAPDMRG---YGDSDSPQDPESYTIF----HLVGDLIG 85 (323)
Q Consensus 23 ~~~~lv~~hG~~~~----------~~~~~~~~~~l~~~G~~vi~~d~~G---~G~s~~~~~~~~~~~~----~~~~~i~~ 85 (323)
++-+||+.|..... .+.+..+++.|.++||++|++|--- .|....+...-..|++ +....+.-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 45688888987532 3457888899999999999987421 1221111110112222 23345667
Q ss_pred HHHHhCCcc-EEEEE
Q 020621 86 LLDELGEEQ-AFVVG 99 (323)
Q Consensus 86 ~l~~~~~~~-~~lvG 99 (323)
+|+..+..- +.++|
T Consensus 127 ILkkygvpATfFlvg 141 (671)
T PRK14582 127 ILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHcCCCEEEEEec
Confidence 777777653 33444
No 482
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=21.43 E-value=2.3e+02 Score=23.28 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=15.5
Q ss_pred CCCeEEEEcccCCCchhHH
Q 020621 23 QGPLVLLIHGFPELWSCWK 41 (323)
Q Consensus 23 ~~~~lv~~hG~~~~~~~~~ 41 (323)
++|.++-+||++|++..|.
T Consensus 108 ~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 108 RKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCeEEEecCCCCCchhHH
Confidence 5688888999999887763
No 483
>PRK03846 adenylylsulfate kinase; Provisional
Probab=21.38 E-value=2.1e+02 Score=21.34 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=23.9
Q ss_pred CCCCeEEEEcccCCCchh-H-HHHHHhhhhcCcEEEeeC
Q 020621 22 GQGPLVLLIHGFPELWSC-W-KYQINHLAEHGYHVVAPD 58 (323)
Q Consensus 22 g~~~~lv~~hG~~~~~~~-~-~~~~~~l~~~G~~vi~~d 58 (323)
++.|.++.+.|..++.-+ . ..+...|...|..++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 356788888887776543 3 334455666677777776
No 484
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=21.28 E-value=1.5e+02 Score=20.00 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=23.1
Q ss_pred cEEEEE-echHHHHHHHHHhhCccccceeeeec
Q 020621 94 QAFVVG-HDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 94 ~~~lvG-~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
|+.++| ..+.|.-.+.+...+|+ +.-+.+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578898 88999888888888885 55444444
No 485
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=21.27 E-value=1.7e+02 Score=24.41 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=53.8
Q ss_pred CeEEEEcccCCCc-------hhHHHHHHhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEE
Q 020621 25 PLVLLIHGFPELW-------SCWKYQINHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFV 97 (323)
Q Consensus 25 ~~lv~~hG~~~~~-------~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~l 97 (323)
..+|++|+-..+. +.|..+.+.+.+. -.+-.+|....|..++.. +..+..+.-+++. ..-++
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~-------d~DA~avR~F~~~---g~~~~ 266 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDL-------DKDAQAVRLFVED---GHEIL 266 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCc-------hhhHHHHHHHHHc---CCceE
Confidence 3689999866554 4798888888776 356667887777765433 3344445555543 23356
Q ss_pred EEechHHHHHHHHHhhCccccceeeeec
Q 020621 98 VGHDWGAQIAWNLCLFRPDRVKALVNLG 125 (323)
Q Consensus 98 vG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 125 (323)
+..|+.=.+.+ +.++|-++-.++
T Consensus 267 laQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 267 LAQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred eehhhhhhcch-----hhhccceeEEEe
Confidence 67776555443 457777776666
No 486
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=21.21 E-value=2.9e+02 Score=23.91 Aligned_cols=42 Identities=17% Similarity=0.054 Sum_probs=29.8
Q ss_pred CCeEEEEcccCCC---chhHHHHHHhhhhc--CcEEEeeCCCCCCCC
Q 020621 24 GPLVLLIHGFPEL---WSCWKYQINHLAEH--GYHVVAPDMRGYGDS 65 (323)
Q Consensus 24 ~~~lv~~hG~~~~---~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s 65 (323)
.|-+|++.+.+.+ .+....+++.+.++ |..|+.+.-+|+..|
T Consensus 97 ~P~~I~V~tTC~~e~IGDDi~~v~~e~~~~~~~~pvv~v~t~Gf~g~ 143 (427)
T PRK02842 97 NISVLFLVGSCPSEVIKLDLEGLAERLSTEFAGVPVLNYSGSGLETT 143 (427)
T ss_pred CCCEEEEECCChHHhhcCCHHHHHHHhhcccCCCeEEEeeCCCcccc
Confidence 4667777776654 45567777777666 688888888888543
No 487
>PRK02399 hypothetical protein; Provisional
Probab=21.18 E-value=2.3e+02 Score=24.28 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=34.4
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCCCCCC
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRGYGDS 65 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s 65 (323)
..|+|-+-=+|.+...-....+.|.++||.|+++.--|.|..
T Consensus 185 ~kp~Ig~TmfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 185 DKPLIGLTMFGVTTPCVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCceEEEecCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 456777777777777777888899999999999999999865
No 488
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=21.17 E-value=2.5e+02 Score=21.43 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=11.6
Q ss_pred CCccEEEEEechHHHH
Q 020621 91 GEEQAFVVGHDWGAQI 106 (323)
Q Consensus 91 ~~~~~~lvG~S~Gg~~ 106 (323)
+.-..+++-||+||..
T Consensus 122 d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 122 DSLDGFFIVHSLGGGT 137 (216)
T ss_dssp TTESEEEEEEESSSSH
T ss_pred cccccceeccccccee
Confidence 4457788888887764
No 489
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=21.15 E-value=1.9e+02 Score=20.69 Aligned_cols=37 Identities=19% Similarity=0.092 Sum_probs=25.8
Q ss_pred EEEcccCCCchhH--HHHHHhhhhcCcEEEeeCCCCCCC
Q 020621 28 LLIHGFPELWSCW--KYQINHLAEHGYHVVAPDMRGYGD 64 (323)
Q Consensus 28 v~~hG~~~~~~~~--~~~~~~l~~~G~~vi~~d~~G~G~ 64 (323)
+.+-|..++.... ..++..|.++|++|.++..-+|+.
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~~ 40 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHDF 40 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 4455666654443 677788888899999998765553
No 490
>PRK13529 malate dehydrogenase; Provisional
Probab=21.14 E-value=2.2e+02 Score=25.64 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=43.0
Q ss_pred eEEEEcccCCCchhHHH-HHHhhhhcCc-------EEEeeCCCCCCCCCCCCCCCCCcHHHHH---------------HH
Q 020621 26 LVLLIHGFPELWSCWKY-QINHLAEHGY-------HVVAPDMRGYGDSDSPQDPESYTIFHLV---------------GD 82 (323)
Q Consensus 26 ~lv~~hG~~~~~~~~~~-~~~~l~~~G~-------~vi~~d~~G~G~s~~~~~~~~~~~~~~~---------------~~ 82 (323)
.-+++.|.|...-.-.. +...+...|. +++.+|..|.=..+... -......++ .+
T Consensus 296 ~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~--l~~~k~~fa~~~~~~~~~~~~~~~~~ 373 (563)
T PRK13529 296 QRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPD--LLDFQKPYARKREELADWDTEGDVIS 373 (563)
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc--chHHHHHHhhhcccccccccccCCCC
Confidence 34555666655443333 3455555566 89999999854333221 000111111 23
Q ss_pred HHHHHHHhCCccEEEEEech-HHHHHHH
Q 020621 83 LIGLLDELGEEQAFVVGHDW-GAQIAWN 109 (323)
Q Consensus 83 i~~~l~~~~~~~~~lvG~S~-Gg~~a~~ 109 (323)
+.++++. .++-+|+|.|- ||.+.-.
T Consensus 374 L~e~v~~--~kPtvLIG~S~~~g~Ft~e 399 (563)
T PRK13529 374 LLEVVRN--VKPTVLIGVSGQPGAFTEE 399 (563)
T ss_pred HHHHHhc--cCCCEEEEecCCCCCCCHH
Confidence 4555544 35779999998 6654433
No 491
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.02 E-value=4.6e+02 Score=22.83 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=39.5
Q ss_pred HhhhhcCcEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC---ccEEEEEechHHH-HHHHHHhhCc-cccc
Q 020621 45 NHLAEHGYHVVAPDMRGYGDSDSPQDPESYTIFHLVGDLIGLLDELGE---EQAFVVGHDWGAQ-IAWNLCLFRP-DRVK 119 (323)
Q Consensus 45 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~---~~~~lvG~S~Gg~-~a~~~a~~~p-~~v~ 119 (323)
..+...++.++.+|-+|+.... .+.++.+..+++..+. ...+||--+..+. -...++..+. -.+.
T Consensus 293 ~~l~~~~~D~VLIDTaGr~~rd----------~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~~ 362 (432)
T PRK12724 293 ETLARDGSELILIDTAGYSHRN----------LEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNYR 362 (432)
T ss_pred HHHHhCCCCEEEEeCCCCCccC----------HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCCC
Confidence 3344457899999987654221 1456667777766532 2455665544444 4455555442 2466
Q ss_pred eeeee
Q 020621 120 ALVNL 124 (323)
Q Consensus 120 ~lvl~ 124 (323)
++|+-
T Consensus 363 glIlT 367 (432)
T PRK12724 363 RILLT 367 (432)
T ss_pred EEEEE
Confidence 77754
No 492
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=21.01 E-value=1.9e+02 Score=22.75 Aligned_cols=38 Identities=18% Similarity=0.452 Sum_probs=31.5
Q ss_pred CCeEEEEcccCCCchhHHHHHHhhhhcCcEEEeeCCCC
Q 020621 24 GPLVLLIHGFPELWSCWKYQINHLAEHGYHVVAPDMRG 61 (323)
Q Consensus 24 ~~~lv~~hG~~~~~~~~~~~~~~l~~~G~~vi~~d~~G 61 (323)
...+|=+||.+.....|..+.+.|.+.||+++..+.-.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~N~ 229 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEPNP 229 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecCCh
Confidence 45778899988877778899999999999999887543
No 493
>PF11022 DUF2611: Protein of unknown function (DUF2611); InterPro: IPR021278 This family is conserved in the Dikarya of Fungi. The function is not known.
Probab=20.72 E-value=84 Score=19.05 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=15.5
Q ss_pred HHHHHHHHHhhhcccccccC
Q 020621 304 QITEEILSHFRKKSIICATH 323 (323)
Q Consensus 304 ~~~~~i~~fl~~~~~~~~~~ 323 (323)
+..+.|.+||++......||
T Consensus 52 DeE~fIk~fl~~~~~e~~kh 71 (71)
T PF11022_consen 52 DEEKFIKEFLKEHEKEEKKH 71 (71)
T ss_pred HHHHHHHHHHHHHHHhhhcC
Confidence 44578999999887767766
No 494
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.66 E-value=1.1e+02 Score=21.60 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhCCccEEEEEechHHHHHH
Q 020621 78 HLVGDLIGLLDELGEEQAFVVGHDWGAQIAW 108 (323)
Q Consensus 78 ~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~ 108 (323)
+....+...+..++.+.++++||+--|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 4566777888889999999999987665443
No 495
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=20.58 E-value=3.4e+02 Score=22.78 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=36.9
Q ss_pred HHHHHhhhhcCcEEEeeCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccEEEEEechHHHHHH
Q 020621 41 KYQINHLAEHGYHVVAPDMRG------------YGDSDSPQDPESYTIFHLVGDLIGLLDELGEEQAFVVGHDWGAQIAW 108 (323)
Q Consensus 41 ~~~~~~l~~~G~~vi~~d~~G------------~G~s~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~lvG~S~Gg~~a~ 108 (323)
..+++.|.++|++|.++-.-- .=.|-.+- .....+..+..+.+++ ..++=++|.|+|=.+..
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPG--DP~~~~~~i~~ik~l~----~~~iPifGICLGHQlla 264 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPG--DPAPLDYAIETIKELL----GTKIPIFGICLGHQLLA 264 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCC--ChhHHHHHHHHHHHHh----ccCCCeEEEcHHHHHHH
Confidence 466788999999988875431 11111222 1223333444444444 34557899999987655
Q ss_pred HHH
Q 020621 109 NLC 111 (323)
Q Consensus 109 ~~a 111 (323)
.+.
T Consensus 265 lA~ 267 (368)
T COG0505 265 LAL 267 (368)
T ss_pred Hhc
Confidence 444
No 496
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=20.44 E-value=3.3e+02 Score=21.83 Aligned_cols=15 Identities=7% Similarity=0.093 Sum_probs=11.5
Q ss_pred CccEEEEEechHHHH
Q 020621 92 EEQAFVVGHDWGAQI 106 (323)
Q Consensus 92 ~~~~~lvG~S~Gg~~ 106 (323)
..+++++|.|++.+.
T Consensus 197 L~~ivliGNSFe~y~ 211 (273)
T PLN03093 197 LNHIALFGNSFEMYE 211 (273)
T ss_pred cCCEEEEeCCHHHHH
Confidence 457888899988655
No 497
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.38 E-value=74 Score=25.96 Aligned_cols=17 Identities=29% Similarity=0.253 Sum_probs=14.6
Q ss_pred EEEEechHHHHHHHHHh
Q 020621 96 FVVGHDWGAQIAWNLCL 112 (323)
Q Consensus 96 ~lvG~S~Gg~~a~~~a~ 112 (323)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 46699999999998874
No 498
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=20.33 E-value=2.4e+02 Score=20.49 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=30.3
Q ss_pred eEEEEcccCCCch--hHHHHHHhhhhcCcEEEeeCCCCCC
Q 020621 26 LVLLIHGFPELWS--CWKYQINHLAEHGYHVVAPDMRGYG 63 (323)
Q Consensus 26 ~lv~~hG~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G 63 (323)
.|+=+=|+-+++- .-..+++.|.++||+|-++-..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 4566667766543 3578889999999999999999998
No 499
>PLN02840 tRNA dimethylallyltransferase
Probab=20.08 E-value=5.8e+02 Score=22.16 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=21.3
Q ss_pred CCCcHHHHHHHHHHHHHHhC--CccEEEEEec
Q 020621 72 ESYTIFHLVGDLIGLLDELG--EEQAFVVGHD 101 (323)
Q Consensus 72 ~~~~~~~~~~~i~~~l~~~~--~~~~~lvG~S 101 (323)
..++..++.++..+.++.+. .+..+|||-+
T Consensus 88 e~ySv~~F~~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 88 DDYSVGAFFDDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 57889999999999998762 2344566643
Done!