Query 020623
Match_columns 323
No_of_seqs 149 out of 1178
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:45:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ec3_A Protein disulfide-isome 100.0 3.2E-34 1.1E-38 258.2 26.3 224 24-261 3-249 (250)
2 2h8l_A Protein disulfide-isome 100.0 7.6E-34 2.6E-38 255.9 21.5 225 23-262 2-252 (252)
3 3us3_A Calsequestrin-1; calciu 100.0 2.6E-31 8.7E-36 252.1 26.6 237 2-250 100-355 (367)
4 3f8u_A Protein disulfide-isome 100.0 3.1E-32 1.1E-36 266.5 18.6 272 2-289 84-385 (481)
5 2r2j_A Thioredoxin domain-cont 100.0 2.1E-30 7E-35 247.0 21.6 242 2-257 91-345 (382)
6 1sji_A Calsequestrin 2, calseq 100.0 6.1E-29 2.1E-33 234.0 27.7 234 2-247 98-350 (350)
7 3uem_A Protein disulfide-isome 100.0 2.4E-30 8.2E-35 244.0 17.5 254 21-289 11-282 (361)
8 4f9z_D Endoplasmic reticulum r 100.0 5E-28 1.7E-32 214.5 22.8 202 29-245 11-227 (227)
9 2b5e_A Protein disulfide-isome 100.0 1.8E-29 6.3E-34 248.4 14.3 268 5-289 101-391 (504)
10 3bj5_A Protein disulfide-isome 99.9 5.1E-22 1.7E-26 164.4 13.3 128 122-256 7-142 (147)
11 3apo_A DNAJ homolog subfamily 99.8 3E-19 1E-23 184.3 18.0 226 2-244 196-543 (780)
12 2djk_A PDI, protein disulfide- 99.7 2.5E-17 8.4E-22 133.5 13.0 124 126-257 3-131 (133)
13 3apo_A DNAJ homolog subfamily 99.7 1.7E-14 5.8E-19 148.8 25.0 235 2-244 518-768 (780)
14 3uem_A Protein disulfide-isome 99.5 3.3E-12 1.1E-16 119.7 24.8 224 3-241 93-355 (361)
15 3ed3_A Protein disulfide-isome 99.5 4E-13 1.4E-17 123.4 12.8 130 5-138 121-279 (298)
16 2l4c_A Endoplasmic reticulum r 99.5 2E-13 6.7E-18 109.3 8.8 102 20-128 12-124 (124)
17 3ed3_A Protein disulfide-isome 99.3 2.2E-10 7.5E-15 105.1 22.7 204 26-243 16-267 (298)
18 3idv_A Protein disulfide-isome 99.3 9.7E-11 3.3E-15 102.9 18.6 200 27-243 15-237 (241)
19 1sji_A Calsequestrin 2, calseq 99.2 1.2E-09 4.1E-14 102.1 22.2 200 28-249 12-231 (350)
20 3f8u_A Protein disulfide-isome 99.2 2.7E-09 9.4E-14 103.7 23.6 227 3-247 193-465 (481)
21 3us3_A Calsequestrin-1; calciu 99.2 1E-09 3.5E-14 103.4 19.8 196 28-245 14-229 (367)
22 2ywm_A Glutaredoxin-like prote 99.1 9.3E-09 3.2E-13 89.8 21.3 195 34-244 7-221 (229)
23 2b5e_A Protein disulfide-isome 99.0 4.5E-08 1.5E-12 95.7 21.4 226 5-247 195-471 (504)
24 1a8l_A Protein disulfide oxido 99.0 3.8E-08 1.3E-12 85.5 18.8 198 32-242 6-225 (226)
25 2r2j_A Thioredoxin domain-cont 98.9 3.9E-08 1.3E-12 93.0 17.2 194 28-245 6-220 (382)
26 3q6o_A Sulfhydryl oxidase 1; p 98.7 2.6E-06 9.1E-11 75.0 21.5 195 27-242 12-239 (244)
27 3idv_A Protein disulfide-isome 98.7 1.6E-07 5.5E-12 82.1 12.7 124 2-131 98-240 (241)
28 2hls_A Protein disulfide oxido 98.6 5E-06 1.7E-10 73.5 19.0 196 29-244 8-227 (243)
29 3t58_A Sulfhydryl oxidase 1; o 98.5 1.7E-05 5.7E-10 77.9 21.4 176 28-218 13-220 (519)
30 4f9z_D Endoplasmic reticulum r 98.5 2E-06 6.7E-11 75.2 13.3 120 4-126 86-223 (227)
31 3tco_A Thioredoxin (TRXA-1); d 98.2 2.4E-05 8.2E-10 59.0 11.8 104 129-242 4-108 (109)
32 3gnj_A Thioredoxin domain prot 98.2 3.8E-05 1.3E-09 58.2 12.9 104 130-243 5-110 (111)
33 3hz4_A Thioredoxin; NYSGXRC, P 98.1 1.9E-05 6.4E-10 63.3 10.4 117 129-255 6-124 (140)
34 2e0q_A Thioredoxin; electron t 98.1 5.2E-05 1.8E-09 56.4 12.0 103 131-243 1-103 (104)
35 3hxs_A Thioredoxin, TRXP; elec 98.1 4.4E-05 1.5E-09 60.8 12.2 105 129-243 22-139 (141)
36 2l5l_A Thioredoxin; structural 98.1 9.7E-05 3.3E-09 58.7 13.5 106 130-245 10-128 (136)
37 3p2a_A Thioredoxin 2, putative 98.0 0.00011 3.6E-09 59.3 13.6 105 130-244 39-144 (148)
38 3die_A Thioredoxin, TRX; elect 98.0 7.4E-05 2.5E-09 56.0 11.5 101 130-241 4-105 (106)
39 2yzu_A Thioredoxin; redox prot 98.0 4.9E-05 1.7E-09 57.1 10.5 102 131-243 3-106 (109)
40 2trx_A Thioredoxin; electron t 98.0 0.00014 4.7E-09 54.8 13.0 102 130-242 3-107 (108)
41 1thx_A Thioredoxin, thioredoxi 98.0 0.00017 5.8E-09 54.8 13.6 105 129-244 7-114 (115)
42 3zzx_A Thioredoxin; oxidoreduc 98.0 5.6E-05 1.9E-09 57.8 10.5 95 29-127 2-105 (105)
43 2ppt_A Thioredoxin-2; thiredox 98.0 9.7E-05 3.3E-09 60.4 12.6 105 131-245 49-154 (155)
44 1nsw_A Thioredoxin, TRX; therm 98.0 7.1E-05 2.4E-09 56.1 10.9 101 131-242 2-104 (105)
45 1v98_A Thioredoxin; oxidoreduc 98.0 0.00011 3.7E-09 58.6 12.1 107 129-245 33-140 (140)
46 3qfa_C Thioredoxin; protein-pr 98.0 0.00012 4.2E-09 56.5 12.0 103 128-241 11-115 (116)
47 1fb6_A Thioredoxin M; electron 98.0 0.00015 5.2E-09 54.1 12.3 102 131-242 2-105 (105)
48 1w4v_A Thioredoxin, mitochondr 97.9 0.00021 7.2E-09 55.2 13.1 104 128-242 12-118 (119)
49 1dby_A Chloroplast thioredoxin 97.9 0.00018 6.2E-09 54.0 12.4 100 131-242 3-106 (107)
50 2vim_A Thioredoxin, TRX; thior 97.9 0.0002 6.9E-09 53.3 12.5 100 132-242 2-104 (104)
51 2dml_A Protein disulfide-isome 97.9 0.0001 3.5E-09 57.7 11.1 104 130-243 18-124 (130)
52 3aps_A DNAJ homolog subfamily 97.9 8.6E-05 2.9E-09 57.5 10.3 109 130-244 4-114 (122)
53 2i4a_A Thioredoxin; acidophIle 97.9 0.00015 5.2E-09 54.3 11.4 101 130-241 3-106 (107)
54 1x5d_A Protein disulfide-isome 97.9 8.8E-05 3E-09 58.2 10.5 109 129-247 7-121 (133)
55 2h8l_A Protein disulfide-isome 97.9 6E-05 2.1E-09 66.7 10.4 118 4-128 90-230 (252)
56 2i1u_A Thioredoxin, TRX, MPT46 97.9 9.4E-05 3.2E-09 57.0 10.3 109 125-243 8-118 (121)
57 1r26_A Thioredoxin; redox-acti 97.9 0.00017 5.8E-09 56.7 11.9 103 131-244 21-124 (125)
58 1t00_A Thioredoxin, TRX; redox 97.8 0.00034 1.2E-08 53.0 12.7 103 130-243 6-111 (112)
59 3h79_A Thioredoxin-like protei 97.8 0.00029 9.8E-09 55.1 12.4 102 129-241 15-126 (127)
60 2vlu_A Thioredoxin, thioredoxi 97.8 0.00033 1.1E-08 54.0 12.7 106 127-244 11-121 (122)
61 3h79_A Thioredoxin-like protei 97.8 0.00023 7.8E-09 55.7 11.8 99 26-127 14-127 (127)
62 3m9j_A Thioredoxin; oxidoreduc 97.8 0.00028 9.6E-09 52.7 11.8 100 132-242 3-105 (105)
63 3f3q_A Thioredoxin-1; His TAG, 97.8 0.00034 1.2E-08 53.2 12.4 99 132-241 10-108 (109)
64 2djk_A PDI, protein disulfide- 97.8 0.00026 9.1E-09 56.1 12.2 98 26-127 5-114 (133)
65 2o8v_B Thioredoxin 1; disulfid 97.8 0.00023 8E-09 56.0 11.7 102 131-243 24-128 (128)
66 1syr_A Thioredoxin; SGPP, stru 97.8 0.00019 6.5E-09 54.7 10.9 103 129-242 9-111 (112)
67 2pu9_C TRX-F, thioredoxin F-ty 97.8 0.00053 1.8E-08 52.0 13.3 104 128-243 4-111 (111)
68 3dxb_A Thioredoxin N-terminall 97.8 0.00032 1.1E-08 60.7 13.2 110 129-248 12-123 (222)
69 1xwb_A Thioredoxin; dimerizati 97.8 0.00035 1.2E-08 52.1 11.9 100 131-241 2-105 (106)
70 2dj1_A Protein disulfide-isome 97.8 0.00019 6.6E-09 56.8 10.8 108 130-248 18-129 (140)
71 1ep7_A Thioredoxin CH1, H-type 97.8 0.00042 1.4E-08 52.4 11.9 101 131-243 4-111 (112)
72 2l57_A Uncharacterized protein 97.8 0.00035 1.2E-08 54.4 11.6 106 131-246 6-120 (126)
73 3uvt_A Thioredoxin domain-cont 97.7 0.00059 2E-08 51.3 12.4 100 130-240 6-109 (111)
74 4euy_A Uncharacterized protein 97.7 0.00014 4.7E-09 54.9 8.3 98 135-242 7-104 (105)
75 1gh2_A Thioredoxin-like protei 97.7 0.0013 4.3E-08 49.4 13.8 97 135-242 8-106 (107)
76 3apq_A DNAJ homolog subfamily 97.7 0.00062 2.1E-08 58.2 12.9 108 129-247 97-206 (210)
77 2voc_A Thioredoxin; electron t 97.7 0.00026 9E-09 54.0 9.4 101 131-243 3-105 (112)
78 3d6i_A Monothiol glutaredoxin- 97.7 0.00072 2.5E-08 51.2 11.8 102 131-243 2-109 (112)
79 3ga4_A Dolichyl-diphosphooligo 97.7 0.00026 9E-09 59.5 9.9 119 20-141 11-166 (178)
80 2vm1_A Thioredoxin, thioredoxi 97.6 0.001 3.4E-08 50.7 12.6 104 130-244 7-115 (118)
81 1faa_A Thioredoxin F; electron 97.6 0.0011 3.9E-08 51.1 12.8 103 128-242 17-123 (124)
82 2xc2_A Thioredoxinn; oxidoredu 97.6 0.0011 3.8E-08 50.7 12.3 99 131-241 15-116 (117)
83 3zzx_A Thioredoxin; oxidoreduc 97.6 0.00079 2.7E-08 51.3 11.3 96 135-241 7-104 (105)
84 2qsi_A Putative hydrogenase ex 97.6 0.00068 2.3E-08 54.4 11.3 113 120-244 9-124 (137)
85 1ti3_A Thioredoxin H, PTTRXH1; 97.6 0.00068 2.3E-08 51.2 10.9 102 131-243 6-112 (113)
86 2c0g_A ERP29 homolog, windbeut 97.6 0.00057 2E-08 60.5 11.6 97 27-128 16-132 (248)
87 1x5e_A Thioredoxin domain cont 97.6 0.00052 1.8E-08 53.3 10.2 108 129-249 7-116 (126)
88 2j23_A Thioredoxin; immune pro 97.6 0.00058 2E-08 52.9 10.4 103 129-242 15-120 (121)
89 1mek_A Protein disulfide isome 97.6 0.00015 5.2E-09 55.3 6.9 105 130-244 8-118 (120)
90 2wz9_A Glutaredoxin-3; protein 97.6 0.0011 3.7E-08 53.7 12.2 105 129-245 12-120 (153)
91 2qc7_A ERP31, ERP28, endoplasm 97.6 0.0007 2.4E-08 59.7 11.8 97 27-127 5-118 (240)
92 3evi_A Phosducin-like protein 97.5 0.0015 5.2E-08 50.9 12.4 106 128-240 2-111 (118)
93 3ec3_A Protein disulfide-isome 97.5 0.00065 2.2E-08 60.0 11.3 118 4-128 91-228 (250)
94 1xfl_A Thioredoxin H1; AT3G510 97.5 0.0015 5.1E-08 50.9 12.0 100 130-242 17-123 (124)
95 2dj3_A Protein disulfide-isome 97.5 0.00046 1.6E-08 54.1 8.6 109 128-245 6-120 (133)
96 3ga4_A Dolichyl-diphosphooligo 97.5 0.0018 6.1E-08 54.4 12.5 122 119-243 8-153 (178)
97 3gnj_A Thioredoxin domain prot 97.4 0.0014 4.9E-08 49.2 10.7 95 27-126 4-108 (111)
98 3ul3_B Thioredoxin, thioredoxi 97.4 0.00055 1.9E-08 53.5 8.4 103 128-240 24-127 (128)
99 3tco_A Thioredoxin (TRXA-1); d 97.4 0.0013 4.3E-08 49.2 10.1 96 26-126 3-107 (109)
100 2l6c_A Thioredoxin; oxidoreduc 97.4 0.00095 3.2E-08 50.7 9.4 102 131-244 5-107 (110)
101 1ep7_A Thioredoxin CH1, H-type 97.4 0.0014 4.7E-08 49.5 10.3 95 27-126 2-109 (112)
102 2f51_A Thioredoxin; electron t 97.4 0.0025 8.6E-08 49.0 12.0 104 129-243 3-113 (118)
103 3m9j_A Thioredoxin; oxidoreduc 97.4 0.0015 5E-08 48.6 10.2 92 29-126 2-104 (105)
104 2av4_A Thioredoxin-like protei 97.4 0.0012 4.2E-08 54.2 10.3 106 15-127 12-138 (160)
105 3apq_A DNAJ homolog subfamily 97.4 0.0021 7E-08 54.9 12.3 104 27-135 97-209 (210)
106 2qgv_A Hydrogenase-1 operon pr 97.4 0.00069 2.3E-08 54.6 8.4 103 17-127 10-124 (140)
107 2ywm_A Glutaredoxin-like prote 97.4 0.0011 3.9E-08 57.1 10.4 116 4-127 93-219 (229)
108 2wz9_A Glutaredoxin-3; protein 97.3 0.0021 7.1E-08 52.0 11.1 111 26-142 11-139 (153)
109 2dbc_A PDCL2, unnamed protein 97.3 0.007 2.4E-07 47.8 14.0 120 127-255 8-131 (135)
110 1a8l_A Protein disulfide oxido 97.3 0.00091 3.1E-08 57.4 9.4 121 2-126 87-224 (226)
111 1xwb_A Thioredoxin; dimerizati 97.3 0.0024 8.1E-08 47.4 10.6 94 29-126 2-105 (106)
112 3d22_A TRXH4, thioredoxin H-ty 97.3 0.0029 9.9E-08 49.9 11.7 98 135-245 31-134 (139)
113 2dml_A Protein disulfide-isome 97.3 0.0025 8.5E-08 49.5 11.1 97 28-127 18-123 (130)
114 2oe3_A Thioredoxin-3; electron 97.3 0.0015 5.1E-08 50.1 9.5 100 130-240 13-113 (114)
115 2dj1_A Protein disulfide-isome 97.3 0.0018 6.2E-08 51.0 10.3 100 28-133 18-129 (140)
116 2djj_A PDI, protein disulfide- 97.3 0.0014 5E-08 50.1 9.4 103 129-244 7-118 (121)
117 2es7_A Q8ZP25_salty, putative 97.3 0.0014 5E-08 52.7 9.3 102 28-135 18-132 (142)
118 1oaz_A Thioredoxin 1; immune s 97.2 0.00028 9.5E-09 55.2 4.7 102 130-242 4-122 (123)
119 1mek_A Protein disulfide isome 97.2 0.0028 9.5E-08 48.1 10.4 99 28-130 8-119 (120)
120 2qgv_A Hydrogenase-1 operon pr 97.2 0.0014 4.6E-08 52.9 8.7 103 130-243 18-125 (140)
121 2voc_A Thioredoxin; electron t 97.2 0.0017 6E-08 49.3 9.1 96 28-129 2-106 (112)
122 3uvt_A Thioredoxin domain-cont 97.2 0.0021 7.2E-08 48.2 9.5 95 27-127 5-111 (111)
123 3die_A Thioredoxin, TRX; elect 97.2 0.0019 6.6E-08 47.9 9.0 95 26-126 2-105 (106)
124 3qou_A Protein YBBN; thioredox 97.2 0.0014 4.9E-08 58.4 9.6 108 127-244 5-115 (287)
125 3qfa_C Thioredoxin; protein-pr 97.2 0.0031 1.1E-07 48.3 10.2 95 26-126 10-115 (116)
126 3q6o_A Sulfhydryl oxidase 1; p 97.2 0.0039 1.3E-07 54.4 12.0 119 3-124 105-236 (244)
127 2vim_A Thioredoxin, TRX; thior 97.2 0.004 1.4E-07 46.0 10.5 92 29-126 1-103 (104)
128 2j23_A Thioredoxin; immune pro 97.2 0.0016 5.5E-08 50.3 8.4 95 27-126 15-119 (121)
129 2es7_A Q8ZP25_salty, putative 97.1 0.0012 3.9E-08 53.3 7.4 105 130-244 18-126 (142)
130 2yzu_A Thioredoxin; redox prot 97.1 0.0037 1.3E-07 46.4 9.8 94 29-127 3-105 (109)
131 1syr_A Thioredoxin; SGPP, stru 97.1 0.0047 1.6E-07 46.7 10.4 95 26-126 7-110 (112)
132 1thx_A Thioredoxin, thioredoxi 97.1 0.0036 1.2E-07 47.2 9.7 98 25-126 5-111 (115)
133 1r26_A Thioredoxin; redox-acti 97.1 0.0043 1.5E-07 48.4 10.3 92 29-126 21-121 (125)
134 1wou_A Thioredoxin -related pr 97.1 0.003 1E-07 49.0 9.1 103 128-240 4-122 (123)
135 3emx_A Thioredoxin; structural 97.1 0.0053 1.8E-07 48.4 10.7 104 130-246 17-129 (135)
136 3p2a_A Thioredoxin 2, putative 97.1 0.0034 1.1E-07 50.2 9.5 95 28-127 39-142 (148)
137 2qc7_A ERP31, ERP28, endoplasm 97.0 0.0043 1.5E-07 54.6 10.8 103 129-241 5-117 (240)
138 2oe3_A Thioredoxin-3; electron 97.0 0.0036 1.2E-07 47.9 9.2 92 28-125 13-113 (114)
139 2i4a_A Thioredoxin; acidophIle 97.0 0.0041 1.4E-07 46.2 9.3 95 28-126 3-106 (107)
140 1gh2_A Thioredoxin-like protei 97.0 0.0054 1.9E-07 45.8 9.9 94 28-126 2-105 (107)
141 2qsi_A Putative hydrogenase ex 97.0 0.0029 9.9E-08 50.7 8.4 95 29-127 17-122 (137)
142 3hxs_A Thioredoxin, TRXP; elec 97.0 0.0084 2.9E-07 47.2 11.2 98 26-127 21-138 (141)
143 1dby_A Chloroplast thioredoxin 97.0 0.0074 2.5E-07 44.9 10.3 95 28-126 2-105 (107)
144 2e0q_A Thioredoxin; electron t 97.0 0.0064 2.2E-07 44.6 9.8 92 29-126 1-101 (104)
145 1w4v_A Thioredoxin, mitochondr 97.0 0.0064 2.2E-07 46.6 10.2 96 28-126 13-117 (119)
146 1zma_A Bacterocin transport ac 96.9 0.0046 1.6E-07 47.3 9.0 103 127-239 10-117 (118)
147 1x5d_A Protein disulfide-isome 96.9 0.0052 1.8E-07 47.7 9.4 96 28-127 8-116 (133)
148 2ppt_A Thioredoxin-2; thiredox 96.9 0.0053 1.8E-07 49.9 9.5 94 29-127 49-151 (155)
149 2trx_A Thioredoxin; electron t 96.9 0.007 2.4E-07 45.1 9.4 95 28-126 3-106 (108)
150 3hz4_A Thioredoxin; NYSGXRC, P 96.9 0.0049 1.7E-07 48.9 8.9 97 26-127 5-111 (140)
151 3gix_A Thioredoxin-like protei 96.8 0.013 4.4E-07 47.2 11.3 107 135-245 10-123 (149)
152 1nsw_A Thioredoxin, TRX; therm 96.8 0.0049 1.7E-07 45.7 8.1 93 29-126 2-103 (105)
153 1xfl_A Thioredoxin H1; AT3G510 96.8 0.013 4.4E-07 45.4 10.8 94 28-126 17-122 (124)
154 2yj7_A LPBCA thioredoxin; oxid 95.9 0.00018 6.3E-09 53.5 0.0 100 131-241 3-105 (106)
155 2xc2_A Thioredoxinn; oxidoredu 96.8 0.0087 3E-07 45.5 9.5 92 29-126 15-116 (117)
156 2vm1_A Thioredoxin, thioredoxi 96.8 0.014 4.9E-07 44.0 10.7 96 26-127 5-113 (118)
157 2av4_A Thioredoxin-like protei 96.8 0.0099 3.4E-07 48.7 10.1 111 131-245 23-141 (160)
158 4euy_A Uncharacterized protein 96.8 0.00099 3.4E-08 50.0 3.9 92 30-126 3-103 (105)
159 1x5e_A Thioredoxin domain cont 96.8 0.0078 2.7E-07 46.5 9.2 100 28-135 8-117 (126)
160 3f3q_A Thioredoxin-1; His TAG, 96.7 0.013 4.4E-07 44.1 10.1 92 29-126 8-108 (109)
161 2fwh_A Thiol:disulfide interch 96.7 0.017 5.8E-07 45.3 11.1 105 128-242 10-127 (134)
162 2l5l_A Thioredoxin; structural 96.7 0.018 6.1E-07 45.2 11.3 97 28-128 10-126 (136)
163 3fk8_A Disulphide isomerase; A 96.7 0.011 3.7E-07 46.1 9.8 98 144-242 27-132 (133)
164 1zma_A Bacterocin transport ac 96.7 0.014 4.7E-07 44.5 10.0 92 28-124 13-117 (118)
165 2i1u_A Thioredoxin, TRX, MPT46 96.7 0.0057 1.9E-07 46.6 7.8 96 26-126 11-116 (121)
166 2vlu_A Thioredoxin, thioredoxi 96.7 0.018 6.2E-07 43.9 10.7 95 27-126 12-118 (122)
167 3bj5_A Protein disulfide-isome 96.7 0.011 3.9E-07 47.7 9.8 104 20-127 7-126 (147)
168 1ti3_A Thioredoxin H, PTTRXH1; 96.7 0.013 4.3E-07 44.0 9.5 94 28-126 5-110 (113)
169 2djj_A PDI, protein disulfide- 96.7 0.0055 1.9E-07 46.8 7.4 95 27-127 7-116 (121)
170 1fb6_A Thioredoxin M; electron 96.7 0.0094 3.2E-07 44.0 8.6 94 29-126 2-104 (105)
171 2c0g_A ERP29 homolog, windbeut 96.7 0.021 7.4E-07 50.3 12.2 104 129-243 16-132 (248)
172 1qgv_A Spliceosomal protein U5 96.6 0.017 5.9E-07 46.0 10.6 107 135-245 10-123 (142)
173 2trc_P Phosducin, MEKA, PP33; 96.6 0.007 2.4E-07 52.3 8.8 109 128-241 98-211 (217)
174 1t00_A Thioredoxin, TRX; redox 96.6 0.0082 2.8E-07 45.1 8.2 94 28-126 6-109 (112)
175 3d6i_A Monothiol glutaredoxin- 96.6 0.02 6.7E-07 43.0 10.3 93 29-126 2-107 (112)
176 2b5x_A YKUV protein, TRXY; thi 96.6 0.026 9E-07 44.1 11.3 91 145-244 28-146 (148)
177 2kuc_A Putative disulphide-iso 96.6 0.01 3.4E-07 46.0 8.6 106 132-247 9-125 (130)
178 2o8v_B Thioredoxin 1; disulfid 96.5 0.011 3.9E-07 46.0 8.7 95 28-126 23-126 (128)
179 1wmj_A Thioredoxin H-type; str 96.5 0.00066 2.3E-08 52.8 1.3 104 131-246 16-125 (130)
180 3aps_A DNAJ homolog subfamily 96.5 0.015 5E-07 44.4 9.1 95 28-127 4-112 (122)
181 1lu4_A Soluble secreted antige 96.5 0.033 1.1E-06 42.8 11.3 91 145-242 23-135 (136)
182 1a0r_P Phosducin, MEKA, PP33; 96.5 0.021 7.1E-07 50.3 10.9 109 128-241 111-224 (245)
183 3iv4_A Putative oxidoreductase 96.4 0.0099 3.4E-07 45.9 7.0 88 28-123 7-111 (112)
184 1v98_A Thioredoxin; oxidoreduc 96.4 0.015 5.1E-07 45.8 8.4 94 28-126 34-136 (140)
185 1zzo_A RV1677; thioredoxin fol 96.3 0.05 1.7E-06 41.7 11.2 89 145-243 24-135 (136)
186 3cxg_A Putative thioredoxin; m 96.3 0.017 5.7E-07 45.4 8.4 102 130-244 21-130 (133)
187 2hls_A Protein disulfide oxido 96.3 0.01 3.6E-07 52.0 7.9 101 137-249 15-123 (243)
188 2dj0_A Thioredoxin-related tra 96.3 0.00097 3.3E-08 52.7 1.0 81 130-212 8-96 (137)
189 3qou_A Protein YBBN; thioredox 96.3 0.02 6.7E-07 50.9 9.7 98 26-127 6-113 (287)
190 3raz_A Thioredoxin-related pro 96.2 0.1 3.6E-06 41.2 13.0 98 145-249 23-146 (151)
191 2f51_A Thioredoxin; electron t 96.1 0.035 1.2E-06 42.4 9.1 98 27-129 3-114 (118)
192 3d22_A TRXH4, thioredoxin H-ty 96.1 0.043 1.5E-06 42.9 9.8 96 26-127 23-131 (139)
193 1hyu_A AHPF, alkyl hydroperoxi 96.1 0.98 3.4E-05 43.7 21.6 132 93-240 61-197 (521)
194 2l6c_A Thioredoxin; oxidoreduc 96.1 0.023 7.7E-07 42.8 7.8 93 30-128 5-106 (110)
195 3iv4_A Putative oxidoreductase 96.1 0.028 9.6E-07 43.3 8.2 94 135-238 13-111 (112)
196 1wou_A Thioredoxin -related pr 96.1 0.023 8E-07 43.8 8.0 92 29-125 6-122 (123)
197 2l4c_A Endoplasmic reticulum r 96.0 0.034 1.2E-06 43.5 8.8 102 126-240 16-121 (124)
198 3or5_A Thiol:disulfide interch 96.0 0.09 3.1E-06 41.9 11.8 95 145-248 33-156 (165)
199 2fwh_A Thiol:disulfide interch 96.0 0.1 3.4E-06 40.7 11.7 98 25-126 9-126 (134)
200 1wmj_A Thioredoxin H-type; str 96.0 0.018 6.2E-07 44.3 7.2 95 27-127 14-121 (130)
201 1fo5_A Thioredoxin; disulfide 96.0 0.024 8.1E-07 40.0 7.2 65 164-241 19-84 (85)
202 1nho_A Probable thioredoxin; b 96.0 0.019 6.7E-07 40.5 6.7 66 164-242 18-84 (85)
203 2dj3_A Protein disulfide-isome 96.0 0.014 4.8E-07 45.3 6.4 101 27-130 7-120 (133)
204 3gix_A Thioredoxin-like protei 95.9 0.047 1.6E-06 43.8 9.6 95 29-126 5-119 (149)
205 2lja_A Putative thiol-disulfid 95.9 0.054 1.9E-06 42.7 9.6 94 146-248 30-148 (152)
206 1oaz_A Thioredoxin 1; immune s 95.9 0.013 4.4E-07 45.4 5.7 94 28-126 4-121 (123)
207 2l57_A Uncharacterized protein 95.8 0.017 5.9E-07 44.4 6.1 80 50-129 28-118 (126)
208 2f9s_A Thiol-disulfide oxidore 95.8 0.069 2.4E-06 42.1 9.8 95 145-248 25-143 (151)
209 2dj0_A Thioredoxin-related tra 95.7 0.011 3.7E-07 46.5 4.8 96 28-126 8-119 (137)
210 2l5o_A Putative thioredoxin; s 95.7 0.079 2.7E-06 41.8 10.0 94 146-250 28-148 (153)
211 3ia1_A THIO-disulfide isomeras 95.7 0.082 2.8E-06 41.8 10.0 92 147-248 31-149 (154)
212 2lrn_A Thiol:disulfide interch 95.7 0.13 4.3E-06 40.7 11.1 91 146-248 29-146 (152)
213 3dxb_A Thioredoxin N-terminall 95.6 0.058 2E-06 46.2 9.4 95 29-128 14-118 (222)
214 3t58_A Sulfhydryl oxidase 1; o 95.6 0.12 4.2E-06 50.4 12.7 107 130-246 13-130 (519)
215 3ul3_B Thioredoxin, thioredoxi 95.6 0.046 1.6E-06 42.2 7.9 76 50-126 44-128 (128)
216 3erw_A Sporulation thiol-disul 95.6 0.082 2.8E-06 41.0 9.4 86 145-239 33-145 (145)
217 3ha9_A Uncharacterized thiored 95.5 0.1 3.4E-06 41.9 10.1 89 145-244 36-165 (165)
218 1qgv_A Spliceosomal protein U5 95.4 0.094 3.2E-06 41.6 9.4 96 29-126 5-119 (142)
219 2pu9_C TRX-F, thioredoxin F-ty 95.4 0.13 4.4E-06 38.3 9.7 93 28-126 6-109 (111)
220 3gl3_A Putative thiol:disulfid 95.4 0.18 6.3E-06 39.5 11.0 95 146-249 28-148 (152)
221 2trc_P Phosducin, MEKA, PP33; 95.4 0.027 9.4E-07 48.5 6.4 97 29-127 101-212 (217)
222 3evi_A Phosducin-like protein 95.3 0.066 2.3E-06 41.4 7.7 96 28-127 4-113 (118)
223 2dbc_A PDCL2, unnamed protein 95.2 0.15 5.3E-06 39.8 10.1 95 28-127 11-120 (135)
224 1a0r_P Phosducin, MEKA, PP33; 95.1 0.079 2.7E-06 46.6 8.7 97 28-127 113-225 (245)
225 1un2_A DSBA, thiol-disulfide i 95.0 0.001 3.5E-08 56.7 -3.8 84 190-289 40-128 (197)
226 1faa_A Thioredoxin F; electron 95.0 0.2 6.7E-06 38.0 9.8 95 26-126 17-122 (124)
227 3kcm_A Thioredoxin family prot 95.0 0.2 7E-06 39.3 10.2 96 145-249 27-149 (154)
228 3cxg_A Putative thioredoxin; m 94.9 0.091 3.1E-06 41.0 7.7 96 28-127 21-128 (133)
229 3fkf_A Thiol-disulfide oxidore 94.8 0.23 7.7E-06 38.6 10.0 87 146-244 33-147 (148)
230 3lor_A Thiol-disulfide isomera 94.7 0.35 1.2E-05 38.2 11.0 90 146-244 30-156 (160)
231 4evm_A Thioredoxin family prot 94.5 0.29 9.8E-06 37.1 9.6 88 145-241 21-137 (138)
232 3emx_A Thioredoxin; structural 94.3 0.15 5E-06 39.8 7.7 93 28-129 17-127 (135)
233 2ju5_A Thioredoxin disulfide i 94.2 0.27 9.1E-06 39.3 9.3 92 145-244 46-153 (154)
234 3eyt_A Uncharacterized protein 94.2 0.45 1.5E-05 37.5 10.6 91 146-245 28-154 (158)
235 2kuc_A Putative disulphide-iso 94.0 0.23 7.7E-06 38.0 8.1 79 50-129 29-122 (130)
236 3fk8_A Disulphide isomerase; A 94.0 0.29 9.9E-06 37.6 8.7 89 33-125 13-130 (133)
237 2yj7_A LPBCA thioredoxin; oxid 92.9 0.011 3.8E-07 43.4 0.0 93 29-126 3-105 (106)
238 1fo5_A Thioredoxin; disulfide 93.6 0.29 1E-05 34.1 7.5 62 60-126 22-84 (85)
239 2lst_A Thioredoxin; structural 92.5 0.015 5E-07 45.0 0.0 92 144-245 17-118 (130)
240 3fw2_A Thiol-disulfide oxidore 93.3 0.93 3.2E-05 35.4 10.8 86 146-243 33-148 (150)
241 1nho_A Probable thioredoxin; b 93.2 0.41 1.4E-05 33.3 7.6 62 60-126 21-83 (85)
242 3lwa_A Secreted thiol-disulfid 93.1 0.68 2.3E-05 37.6 10.1 92 146-243 59-181 (183)
243 1jfu_A Thiol:disulfide interch 93.1 1.1 3.9E-05 36.3 11.5 94 146-246 60-183 (186)
244 3hdc_A Thioredoxin family prot 93.0 1.4 4.7E-05 34.8 11.5 67 145-215 40-127 (158)
245 3qcp_A QSOX from trypanosoma b 92.7 0.43 1.5E-05 45.9 9.3 110 130-246 24-155 (470)
246 2h30_A Thioredoxin, peptide me 92.7 0.62 2.1E-05 36.8 9.0 105 130-243 22-156 (164)
247 3hcz_A Possible thiol-disulfid 92.5 0.35 1.2E-05 37.5 7.0 67 146-216 31-124 (148)
248 1kng_A Thiol:disulfide interch 92.4 0.76 2.6E-05 35.9 9.1 88 146-243 42-152 (156)
249 2cvb_A Probable thiol-disulfid 92.4 0.73 2.5E-05 37.6 9.2 98 146-248 33-164 (188)
250 1sen_A Thioredoxin-like protei 92.3 0.22 7.4E-06 40.4 5.8 99 144-244 44-149 (164)
251 2ywi_A Hypothetical conserved 92.0 0.86 2.9E-05 37.3 9.3 55 191-248 121-179 (196)
252 1z6n_A Hypothetical protein PA 91.9 1.3 4.4E-05 36.2 10.1 80 133-214 40-121 (167)
253 1ilo_A Conserved hypothetical 91.2 0.48 1.6E-05 32.4 5.9 57 60-123 19-76 (77)
254 3f9u_A Putative exported cytoc 91.2 0.93 3.2E-05 36.5 8.5 43 193-243 123-166 (172)
255 2b1k_A Thiol:disulfide interch 91.1 1.2 4.1E-05 35.4 9.0 45 191-243 116-160 (168)
256 3u5r_E Uncharacterized protein 90.9 1.5 5.1E-05 37.0 9.8 54 191-248 134-192 (218)
257 3ewl_A Uncharacterized conserv 90.7 1 3.4E-05 34.7 7.9 37 195-242 104-140 (142)
258 1ilo_A Conserved hypothetical 90.5 1.3 4.5E-05 30.0 7.6 60 163-238 15-76 (77)
259 3kh7_A Thiol:disulfide interch 89.7 2.4 8.2E-05 34.3 9.8 43 191-243 123-167 (176)
260 3qcp_A QSOX from trypanosoma b 89.6 0.12 4E-06 49.8 1.8 85 28-114 24-126 (470)
261 3eur_A Uncharacterized protein 88.5 2.7 9.3E-05 32.2 8.9 36 193-239 106-141 (142)
262 4fo5_A Thioredoxin-like protei 88.4 3.2 0.00011 31.9 9.3 83 146-240 32-142 (143)
263 2lrt_A Uncharacterized protein 88.2 2.6 9.1E-05 33.0 8.8 66 146-215 35-125 (152)
264 3ira_A Conserved protein; meth 87.5 1.9 6.5E-05 35.5 7.7 76 135-214 28-115 (173)
265 2hyx_A Protein DIPZ; thioredox 87.5 2.4 8.4E-05 38.9 9.2 88 146-244 82-200 (352)
266 1i5g_A Tryparedoxin II; electr 87.0 3.7 0.00013 31.5 9.0 68 145-216 27-122 (144)
267 1o8x_A Tryparedoxin, TRYX, TXN 86.7 3.9 0.00013 31.5 8.9 67 146-216 28-122 (146)
268 3s9f_A Tryparedoxin; thioredox 86.7 3.6 0.00012 32.8 8.9 68 146-217 48-143 (165)
269 1o73_A Tryparedoxin; electron 86.2 4.1 0.00014 31.1 8.7 67 146-216 28-122 (144)
270 2b5x_A YKUV protein, TRXY; thi 85.9 3.3 0.00011 31.6 8.0 43 82-126 99-143 (148)
271 4evm_A Thioredoxin family prot 83.5 5.9 0.0002 29.3 8.4 42 82-125 93-136 (138)
272 1lu4_A Soluble secreted antige 83.0 12 0.00041 27.7 10.1 44 82-126 88-134 (136)
273 2rli_A SCO2 protein homolog, m 83.0 8.5 0.00029 30.2 9.5 32 205-243 131-164 (171)
274 3drn_A Peroxiredoxin, bacterio 82.2 9.9 0.00034 29.8 9.6 50 191-244 97-150 (161)
275 3ia1_A THIO-disulfide isomeras 81.5 4.7 0.00016 31.1 7.3 46 82-128 98-144 (154)
276 2bmx_A Alkyl hydroperoxidase C 81.3 3 0.0001 34.2 6.3 54 191-248 117-175 (195)
277 2f9s_A Thiol-disulfide oxidore 80.9 10 0.00035 29.0 9.1 43 83-127 93-137 (151)
278 2lst_A Thioredoxin; structural 81.7 0.32 1.1E-05 37.1 0.0 64 63-126 45-114 (130)
279 2fgx_A Putative thioredoxin; N 79.7 4.6 0.00016 30.4 6.2 77 148-238 30-106 (107)
280 1zzo_A RV1677; thioredoxin fol 79.3 17 0.00056 26.8 9.8 44 82-126 90-133 (136)
281 2l5o_A Putative thioredoxin; s 79.0 18 0.00062 27.5 10.0 45 82-126 95-139 (153)
282 2ju5_A Thioredoxin disulfide i 78.1 13 0.00043 29.1 8.9 42 84-126 107-150 (154)
283 2jsy_A Probable thiol peroxida 77.6 21 0.00071 27.9 10.1 94 146-242 44-166 (167)
284 2ggt_A SCO1 protein homolog, m 76.1 9.9 0.00034 29.5 7.7 31 206-243 129-161 (164)
285 2vup_A Glutathione peroxidase- 75.9 20 0.00069 28.9 9.8 34 206-244 153-186 (190)
286 3lor_A Thiol-disulfide isomera 75.5 14 0.00047 28.5 8.4 40 85-126 112-153 (160)
287 3erw_A Sporulation thiol-disul 75.3 15 0.00052 27.5 8.4 42 82-124 103-145 (145)
288 2k6v_A Putative cytochrome C o 75.2 9.1 0.00031 30.0 7.3 33 203-241 137-171 (172)
289 1xvw_A Hypothetical protein RV 73.5 15 0.00051 28.4 8.2 48 191-241 106-158 (160)
290 3gl3_A Putative thiol:disulfid 73.5 22 0.00076 26.9 9.1 43 84-128 96-142 (152)
291 1ttz_A Conserved hypothetical 72.8 5.2 0.00018 28.6 4.7 65 163-245 15-79 (87)
292 2dlx_A UBX domain-containing p 72.6 21 0.0007 28.4 8.7 56 178-243 77-136 (153)
293 2fgx_A Putative thioredoxin; N 71.7 7.3 0.00025 29.2 5.4 58 60-123 48-106 (107)
294 2v1m_A Glutathione peroxidase; 71.5 19 0.00064 28.0 8.3 37 204-245 133-169 (169)
295 1kng_A Thiol:disulfide interch 71.2 21 0.00072 27.2 8.5 43 82-126 106-150 (156)
296 3cmi_A Peroxiredoxin HYR1; thi 70.7 18 0.00062 28.5 8.1 33 206-243 136-168 (171)
297 2ls5_A Uncharacterized protein 73.3 0.88 3E-05 35.9 0.0 52 191-249 103-154 (159)
298 3raz_A Thioredoxin-related pro 70.6 33 0.0011 26.1 10.4 44 83-126 93-138 (151)
299 2lja_A Putative thiol-disulfid 70.5 22 0.00075 27.0 8.4 42 83-126 98-141 (152)
300 3f9u_A Putative exported cytoc 70.5 35 0.0012 26.7 9.9 41 86-126 123-164 (172)
301 2p5q_A Glutathione peroxidase 70.1 32 0.0011 26.6 9.5 36 203-243 130-168 (170)
302 1sen_A Thioredoxin-like protei 70.1 16 0.00053 29.0 7.6 99 25-126 26-146 (164)
303 3ewl_A Uncharacterized conserv 69.7 27 0.00091 26.2 8.7 37 88-127 104-140 (142)
304 2lus_A Thioredoxion; CR-Trp16, 72.6 0.94 3.2E-05 34.7 0.0 22 191-215 99-120 (143)
305 3kh7_A Thiol:disulfide interch 69.7 28 0.00097 27.6 9.2 43 82-126 121-165 (176)
306 1uul_A Tryparedoxin peroxidase 68.1 17 0.00058 29.7 7.6 50 191-243 111-165 (202)
307 3or5_A Thiol:disulfide interch 66.9 33 0.0011 26.3 8.9 35 90-126 113-149 (165)
308 1ego_A Glutaredoxin; electron 66.3 7.7 0.00026 26.6 4.4 65 162-241 14-82 (85)
309 3ira_A Conserved protein; meth 65.3 28 0.00097 28.2 8.2 82 18-102 11-113 (173)
310 1zye_A Thioredoxin-dependent p 65.0 23 0.00079 29.6 7.9 50 191-244 131-186 (220)
311 1we0_A Alkyl hydroperoxide red 63.8 8.9 0.0003 30.9 4.9 50 191-244 103-158 (187)
312 1zof_A Alkyl hydroperoxide-red 63.0 6.5 0.00022 32.2 4.0 49 191-243 108-161 (198)
313 3kp8_A Vkorc1/thioredoxin doma 61.6 14 0.00049 27.1 5.3 75 147-239 13-91 (106)
314 2b1k_A Thiol:disulfide interch 60.1 49 0.0017 25.5 8.7 43 82-126 114-158 (168)
315 3fkf_A Thiol-disulfide oxidore 59.5 6.6 0.00023 29.8 3.2 41 83-126 104-144 (148)
316 3hdc_A Thioredoxin family prot 59.3 42 0.0014 25.8 8.1 48 83-130 105-154 (158)
317 3ha9_A Uncharacterized thiored 58.0 61 0.0021 24.9 9.0 64 59-126 98-162 (165)
318 2i81_A 2-Cys peroxiredoxin; st 57.6 46 0.0016 27.5 8.5 49 191-243 127-180 (213)
319 1qmv_A Human thioredoxin perox 57.2 37 0.0013 27.4 7.7 49 192-243 110-163 (197)
320 3kij_A Probable glutathione pe 55.4 58 0.002 25.7 8.5 39 146-185 38-78 (180)
321 3eyt_A Uncharacterized protein 54.9 67 0.0023 24.3 9.9 63 60-126 81-150 (158)
322 3gkn_A Bacterioferritin comigr 54.8 52 0.0018 25.3 8.0 34 204-241 125-160 (163)
323 1hyu_A AHPF, alkyl hydroperoxi 53.8 1.1E+02 0.0038 29.0 11.5 111 6-126 76-198 (521)
324 2dlx_A UBX domain-containing p 53.1 81 0.0028 24.8 9.1 61 64-125 69-133 (153)
325 2h01_A 2-Cys peroxiredoxin; th 52.9 28 0.00095 28.0 6.2 49 191-243 106-159 (192)
326 3ph9_A Anterior gradient prote 52.1 83 0.0029 24.6 9.6 20 83-102 90-109 (151)
327 2obi_A PHGPX, GPX-4, phospholi 51.8 31 0.0011 27.5 6.2 30 204-240 150-181 (183)
328 2ywi_A Hypothetical conserved 51.6 64 0.0022 25.6 8.3 43 82-126 119-172 (196)
329 3eur_A Uncharacterized protein 51.6 48 0.0016 24.8 7.1 38 85-125 105-142 (142)
330 3kp8_A Vkorc1/thioredoxin doma 51.1 16 0.00053 26.9 3.9 38 82-125 55-92 (106)
331 1ttz_A Conserved hypothetical 49.9 18 0.0006 25.7 3.9 39 82-126 37-75 (87)
332 3hcz_A Possible thiol-disulfid 49.6 11 0.00036 28.6 2.9 37 85-123 103-141 (148)
333 3dwv_A Glutathione peroxidase- 49.5 73 0.0025 25.3 8.3 38 203-245 145-185 (187)
334 3kcm_A Thioredoxin family prot 48.9 59 0.002 24.5 7.3 42 83-126 96-141 (154)
335 3fw2_A Thiol-disulfide oxidore 48.7 10 0.00036 29.1 2.7 70 51-125 71-145 (150)
336 2p31_A CL683, glutathione pero 48.3 40 0.0014 26.8 6.4 40 146-186 49-90 (181)
337 1wjk_A C330018D20RIK protein; 47.8 51 0.0017 23.6 6.3 78 147-242 16-95 (100)
338 1xvq_A Thiol peroxidase; thior 47.1 49 0.0017 26.1 6.7 24 191-215 110-140 (175)
339 2h30_A Thioredoxin, peptide me 46.0 18 0.00063 27.9 3.8 44 82-127 110-155 (164)
340 2k8s_A Thioredoxin; dimer, str 44.2 12 0.00042 25.5 2.2 44 163-209 16-61 (80)
341 2hyx_A Protein DIPZ; thioredox 44.1 76 0.0026 28.8 8.2 42 83-126 154-197 (352)
342 3dml_A Putative uncharacterize 42.5 13 0.00044 28.2 2.3 43 83-126 66-108 (116)
343 3ztl_A Thioredoxin peroxidase; 42.1 94 0.0032 25.6 8.0 49 191-242 144-197 (222)
344 2cvb_A Probable thiol-disulfid 41.6 98 0.0034 24.3 7.8 43 82-126 105-157 (188)
345 3a2v_A Probable peroxiredoxin; 41.4 80 0.0027 27.1 7.5 49 191-243 107-162 (249)
346 2gs3_A PHGPX, GPX-4, phospholi 40.6 82 0.0028 25.0 7.2 31 204-241 152-184 (185)
347 3kp9_A Vkorc1/thioredoxin doma 40.6 39 0.0013 30.0 5.4 78 35-124 189-276 (291)
348 3gyk_A 27KDA outer membrane pr 40.0 1.3E+02 0.0044 23.3 10.3 37 193-243 137-173 (175)
349 2lrn_A Thiol:disulfide interch 36.1 1.3E+02 0.0046 22.4 8.7 40 83-125 99-138 (152)
350 2od5_A Hypothetical protein; m 35.2 54 0.0019 23.8 4.4 40 11-56 28-67 (116)
351 2b7k_A SCO1 protein; metalloch 33.7 1.8E+02 0.0063 23.2 9.3 36 204-244 145-180 (200)
352 3lwa_A Secreted thiol-disulfid 31.2 1.8E+02 0.0063 22.5 9.6 35 90-126 143-179 (183)
353 3ph9_A Anterior gradient prote 30.8 1.5E+02 0.0052 23.0 7.0 59 179-242 80-141 (151)
354 1z6n_A Hypothetical protein PA 30.7 1.6E+02 0.0054 23.3 7.3 73 50-125 56-140 (167)
355 2f8a_A Glutathione peroxidase 30.0 2.2E+02 0.0076 23.1 9.3 35 204-243 173-207 (208)
356 2yzh_A Probable thiol peroxida 27.2 2.1E+02 0.0073 21.9 10.2 46 191-240 115-169 (171)
357 3gha_A Disulfide bond formatio 26.2 67 0.0023 26.3 4.3 45 192-250 155-199 (202)
358 3u5r_E Uncharacterized protein 25.8 2.2E+02 0.0074 23.2 7.6 43 82-126 132-185 (218)
359 2bmx_A Alkyl hydroperoxidase C 23.5 1.2E+02 0.0041 24.2 5.3 76 51-128 81-170 (195)
360 3dml_A Putative uncharacterize 22.5 1.1E+02 0.0039 22.9 4.6 55 179-243 53-110 (116)
No 1
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-34 Score=258.23 Aligned_cols=224 Identities=14% Similarity=0.201 Sum_probs=179.2
Q ss_pred hcCCCceecCChHHHHHHHHh-cCCcccEEEEecCC-----hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeE
Q 020623 24 FVAPDVSILNSDAEVSDFVEN-AGTFFPLFIGFGLD-----ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 24 ~~~p~v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~-----~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~i 97 (323)
+++|+|+.|+|.+++++|++. ++ +++|||+.+ .+.|.++|..+++++.|+++ .+++++.+++++ .|+|
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~---v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t--~~~~v~~~~~v~-~p~i 76 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDD---VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT--FSTEIAKFLKVS-LGKL 76 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSS---CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE--CCHHHHHHHTCC-SSEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCC---eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE--CcHHHHHHcCCC-CCeE
Confidence 689999999999999999998 77 489999864 24789999999999999998 577899899985 5999
Q ss_pred EEecCC------CCCCcccc--CCCCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcEEEEEEeCC---C-hhHHHHH
Q 020623 98 VALQPS------YNEHNIFY--GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDE---T-EEKSQKL 165 (323)
Q Consensus 98 vv~k~~------~~~~~~y~--g~~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~---~-~e~~~~~ 165 (323)
++||+. ++....|+ |+++.++|.+||+.+++|+|+++|.+|+..++ .++|++++|+..+ + .+..+.+
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~ 155 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY-SKRPLVVVYYSVDFSFDYRTATQFW 155 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS-CSSSEEEEEECCCCSTTTHHHHHHH
T ss_pred EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh-ccCccEEEEEecccccccchhHHHH
Confidence 999962 34567888 47999999999999999999999999999988 4789998888532 1 3445678
Q ss_pred HHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCC-CeEEEEeCC-cceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 166 VTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL-PKMVVWDGN-ENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 166 ~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~-P~ivI~~~~-~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
++.++++|++|+.++|+|+|+.++++.+++||+ +..+. |.+++++.+ .||.++ .+++|.++|.+|+++|++
T Consensus 156 ~~~~~~vAk~~kki~F~~~d~~~~~~~l~~fgl-~~~~~~p~~~~~~~~~~ky~~~------~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 156 RNKVLEVAKDFPEYTFAIADEEDYATEVKDLGL-SESGGDVNAAILDESGKKFAME------PEEFDSDALREFVMAFKK 228 (250)
T ss_dssp HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC-SSCSCSCEEEEECTTSCEEECC------CCSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcceeEEEEcHHHHHHHHHHcCC-CccCCCcEEEEEcCCCceecCC------cccCCHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999 54444 688888864 477664 246899999999999999
Q ss_pred CcccccccCC--CCCC-CCee
Q 020623 244 GRTEQKKVAG--PSIF-GFVN 261 (323)
Q Consensus 244 Gkl~~~~kSe--P~~~-g~v~ 261 (323)
|+++|++||| |+.+ |+|.
T Consensus 229 Gkl~p~~kSepiPe~~~~pV~ 249 (250)
T 3ec3_A 229 GKLKPVIKSQPVPKNNKGAAA 249 (250)
T ss_dssp TCCCCCC--------------
T ss_pred CCccceeecCCCCCCCCCCCC
Confidence 9999999999 7766 8775
No 2
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=255.91 Aligned_cols=225 Identities=18% Similarity=0.298 Sum_probs=174.1
Q ss_pred HhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC--h---hHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeE
Q 020623 23 KFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 23 k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~i 97 (323)
++++|+|+.|+|.+++++|++.++ +++|||+.+ + +.|.++|..+++++.|+++ .+++++.+++++ .|+|
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~---v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~--~~~~v~~~~~~~-~p~i 75 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT--NVESLVNEYDDN-GEGI 75 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSS---CEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE--CCHHHHHHHCSS-SEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCC---eEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE--ChHHHHHHhCCC-CCcE
Confidence 689999999999999999999887 479998764 2 4788999999999999998 567899999986 5999
Q ss_pred EEecCC------CCCCccc-cCCCCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcEEEEEEeCCC---hhHHHHHHH
Q 020623 98 VALQPS------YNEHNIF-YGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDET---EEKSQKLVT 167 (323)
Q Consensus 98 vv~k~~------~~~~~~y-~g~~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~---~e~~~~~~~ 167 (323)
++||+. ++....| .|+++.++|.+||+.+++|+|+++|.+|+..++. .|++++|+..+. .+..+.+.+
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 153 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWRN 153 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSS--SSEEEEEECCBTTTBHHHHHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcC--CCeEEEEeecchhhcchhHHHHHH
Confidence 999962 2455689 8999999999999999999999999999999854 577777775322 123446889
Q ss_pred HHHHHHHhCCC----eEEEEEcCcchhhHhhhcCCc-CCCCCCeEEEEeCC-cceeeccCCCCCCCCCCHHH--HHHHHH
Q 020623 168 TLKAAASANRE----LVFCYVGIKQFADFADTFEAN-KKSKLPKMVVWDGN-ENYLTVIGSESIDEEDQGSQ--ISRFLE 239 (323)
Q Consensus 168 ~l~~~A~~~~~----l~F~~vd~~~~~~~~~~~gl~-~~~~~P~ivI~~~~-~kY~~~~~~~~~~~~~t~~~--I~~Fi~ 239 (323)
.++++|++|++ ++|+|+|+..+++++++||++ +..++|+++|++.. .+|.+. ++++.++ |.+|++
T Consensus 154 ~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~-------~~~t~~~~~i~~F~~ 226 (252)
T 2h8l_A 154 RVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQ-------EEFSRDGKALERFLQ 226 (252)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECC-------SCCCTTSHHHHHHHH
T ss_pred HHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCC-------cccCcchHHHHHHHH
Confidence 99999999873 999999999999999999992 12689999999874 466542 2577777 999999
Q ss_pred HHHcCcccccccCC--CCCC-CCeeE
Q 020623 240 GYREGRTEQKKVAG--PSIF-GFVNS 262 (323)
Q Consensus 240 ~~~~Gkl~~~~kSe--P~~~-g~v~~ 262 (323)
+|++|+++|++||| |+.+ |+|+.
T Consensus 227 ~~~~Gkl~~~~kSe~iPe~~~~pV~~ 252 (252)
T 2h8l_A 227 DYFDGNLKRYLKSEPIPESNDGAAAS 252 (252)
T ss_dssp HHHHTCSCCCC---------------
T ss_pred HHHCCCccccccCCCCCCCCCCCCCC
Confidence 99999999999999 7766 98873
No 3
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=2.6e-31 Score=252.07 Aligned_cols=237 Identities=15% Similarity=0.248 Sum_probs=196.7
Q ss_pred CCcccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHH-hcCCcccEEEEecCC--h---hHHHHHHHhhcCceeE
Q 020623 2 HGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAWF 75 (323)
Q Consensus 2 ~G~~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~-~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~F 75 (323)
+|++.+|.|+|+++.|++|++++++|++..|++.+++++|++ +++ +++|||+.+ + ..|.++|..+++++.|
T Consensus 100 ~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F 176 (367)
T 3us3_A 100 EDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDE---IKLIGYFKNKDSEHYKAFKEAAEEFHPYIPF 176 (367)
T ss_dssp TTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTCHHHHHHHHHHHHHTTTSCE
T ss_pred CCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCC---cEEEEEECCCCchHHHHHHHHHHhhcCCcEE
Confidence 578889999999999999999999999999999999999998 555 579998753 2 3788999999999999
Q ss_pred EeecccchhhHhhcCCCCCCeEEEecCCCCCCccccCC-CCHHHHHHHHHhhcCCCeeecChhhHHHhhcC--CCcEEEE
Q 020623 76 AVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNLLKDD--KRKIVLA 152 (323)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~-~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~--~~~~v~~ 152 (323)
+++ .+++++.++++. .|+|++|++..+....|.|. ++.++|.+||+.+++|+|+++|.+|+..++.+ .++++++
T Consensus 177 ~~~--~~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~ 253 (367)
T 3us3_A 177 FAT--FDSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVA 253 (367)
T ss_dssp EEE--CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEE
T ss_pred EEE--CCHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEE
Confidence 988 467889999985 69999999865667789884 89999999999999999999999999887764 3467777
Q ss_pred EEeCCChhHHHHHHHHHHHHHHhCCC---eEEEEEcCcchhhHh----hhcCCcCCCCCCeEEEEeCC-c--ceeeccCC
Q 020623 153 IVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWDGN-E--NYLTVIGS 222 (323)
Q Consensus 153 f~~~~~~e~~~~~~~~l~~~A~~~~~---l~F~~vd~~~~~~~~----~~~gl~~~~~~P~ivI~~~~-~--kY~~~~~~ 222 (323)
|++. +.+...++++.|+++|++|++ ++|+|+|+..+++.+ +.||+ + .++|+++|++.. + +|+.+++.
T Consensus 254 f~~~-~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl-~-~~~P~~~i~~~~~~~~~~y~~~~~ 330 (367)
T 3us3_A 254 FAEE-ADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDI-D-LSAPQIGVVNVTDADSVWMEMDDE 330 (367)
T ss_dssp ECCT-TSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTC-C-TTSCEEEEEETTTCCEEECCCCTT
T ss_pred EEcC-CChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCC-C-CCCCeEEEEecccccceeecCCcc
Confidence 7764 334567899999999999995 999999999887655 45999 5 579999999973 3 34433210
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCcccccc
Q 020623 223 ESIDEEDQGSQISRFLEGYREGRTEQKK 250 (323)
Q Consensus 223 ~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~ 250 (323)
.+++|.++|.+|+++|++|+++|.-
T Consensus 331 ---~~~~t~~~i~~F~~~~~~Gkl~p~~ 355 (367)
T 3us3_A 331 ---EDLPSAEELEDWLEDVLEGEINTED 355 (367)
T ss_dssp ---SCCCCHHHHHHHHHHHHHTSSCC--
T ss_pred ---cccCCHHHHHHHHHHHHcCCcCccc
Confidence 1368999999999999999999964
No 4
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=3.1e-32 Score=266.47 Aligned_cols=272 Identities=18% Similarity=0.266 Sum_probs=224.2
Q ss_pred CC-cccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC-----hhHHHHHHHhhcCceeE
Q 020623 2 HG-IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-----ESVMSNLALKYKKKAWF 75 (323)
Q Consensus 2 ~G-~~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~-----~~~f~~~A~~~~~~~~F 75 (323)
+| .+..|.|+|+++.|++|+.++++|++..+.+.++++++++.++ +++|||+.+ ...|.++|..+++++.|
T Consensus 84 ~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F 160 (481)
T 3f8u_A 84 DGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNLRDNYRF 160 (481)
T ss_dssp TTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSS---CEEEEEESCTTCHHHHHHHHHHHHHTTTSCE
T ss_pred CCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCC---cEEEEEECCCccchHHHHHHHHHHhccCceE
Confidence 56 4678999999999999999999999999999999999999887 478998743 24788999999999999
Q ss_pred EeecccchhhHhhcCCCCCCeEEEec------CCCCCCcccc-CCCCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCc
Q 020623 76 AVAKDFSEDTMVLYDFDKVPALVALQ------PSYNEHNIFY-GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRK 148 (323)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~p~ivv~k------~~~~~~~~y~-g~~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~ 148 (323)
+++ .+++++.++++. .+.|++|+ +..+....|. |.++.++|.+||+.+++|+|+++|.+|+..++. .|
T Consensus 161 ~~~--~~~~~~~~~~v~-~~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~--~~ 235 (481)
T 3f8u_A 161 AHT--NVESLVNEYDDN-GEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG--KD 235 (481)
T ss_dssp EEE--CCHHHHHHHCSS-SEEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTT--SS
T ss_pred EEE--CCHHHHHHhCCC-CCcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcC--CC
Confidence 988 577889999985 45699998 3233456788 789999999999999999999999999999985 56
Q ss_pred EEEEEEeCCC---hhHHHHHHHHHHHHHHhCCC----eEEEEEcCcchhhHhhhcCCcC--CCCCCeEEEEeCCc-ceee
Q 020623 149 IVLAIVEDET---EEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANK--KSKLPKMVVWDGNE-NYLT 218 (323)
Q Consensus 149 ~v~~f~~~~~---~e~~~~~~~~l~~~A~~~~~----l~F~~vd~~~~~~~~~~~gl~~--~~~~P~ivI~~~~~-kY~~ 218 (323)
++++|+..+. .+..+.+.+.++++|++|++ ++|+|+|...+++++++||+ + ..++|.++|.+.++ +|.+
T Consensus 236 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl-~~~~~~~P~~~i~~~~~~ky~~ 314 (481)
T 3f8u_A 236 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGL-ESTAGEIPVVAIRTAKGEKFVM 314 (481)
T ss_dssp EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTC-CCCTTCSCEEEEECSSSCEEEC
T ss_pred ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCC-CcccCCCcEEEEEcCCCcccCC
Confidence 7766665321 12223467889999999874 99999999999999999999 5 45899999998644 6755
Q ss_pred ccCCCCCCCCCCHH--HHHHHHHHHHcCcccccccCC--CCCC-CCeeEEeccCcceehHH--HHHHHHHHHHhcCCC
Q 020623 219 VIGSESIDEEDQGS--QISRFLEGYREGRTEQKKVAG--PSIF-GFVNSLIGIRSVYIIVF--MVAMLMLLRTLGKDD 289 (323)
Q Consensus 219 ~~~~~~~~~~~t~~--~I~~Fi~~~~~Gkl~~~~kSe--P~~~-g~v~~vVg~~~~~iv~~--~~~~~~~~~~~~~~~ 289 (323)
. ++++.+ +|.+|++++++|+++++++|+ |..+ ++++.++|.+|..++.- -..++.+..+||++|
T Consensus 315 ~-------~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C 385 (481)
T 3f8u_A 315 Q-------EEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHC 385 (481)
T ss_dssp C-------SCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHH
T ss_pred C-------cccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhH
Confidence 2 357888 999999999999999999999 5544 89999999998877653 245666778899988
No 5
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=246.96 Aligned_cols=242 Identities=14% Similarity=0.205 Sum_probs=177.9
Q ss_pred CCccc--ccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC--h---hHHHHHHHhhcCcee
Q 020623 2 HGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAW 74 (323)
Q Consensus 2 ~G~~~--eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~ 74 (323)
+|... +|.|.|+++.|++|+.++++|++..|++.++++. +..++ +++|||+.+ . ..|.++|..+++++.
T Consensus 91 ~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~---~~~v~ff~~~~~~~~~~f~~~A~~~~~~~~ 166 (382)
T 2r2j_A 91 NGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSK---RNIIGYFEQKDSDNYRVFERVANILHDDCA 166 (382)
T ss_dssp TTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------C---CEEEEEESCSSSHHHHHHHHHHHHHTTTCE
T ss_pred CCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCC---CEEEEEECCCCChhHHHHHHHHHHhhccce
Confidence 56643 7999999999999999999999999988888988 55555 478998753 2 368899999999999
Q ss_pred EEeecccchhhHhhcCCCCCCeEEEecCCC--CCCccccCCC-CHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcEEE
Q 020623 75 FAVAKDFSEDTMVLYDFDKVPALVALQPSY--NEHNIFYGPF-DEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVL 151 (323)
Q Consensus 75 F~~~~~~~~~~~~~~~~~~~p~ivv~k~~~--~~~~~y~g~~-~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~ 151 (323)
|+++. + +++..+++.+.| ++|++.. +....|.|++ +.++|.+||..+++|+++++|.+|+..++..++|+++
T Consensus 167 F~~~~--~-~~~~~~~v~~~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~v 241 (382)
T 2r2j_A 167 FLSAF--G-DVSKPERYSGDN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLI 241 (382)
T ss_dssp EEEEE--S-CC--------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCCCEEE
T ss_pred EEEEe--h-hhHHhhCCCCCc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCCcEEE
Confidence 98873 2 566677776667 5666532 2456789998 8999999999999999999999999999988899998
Q ss_pred EEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCC
Q 020623 152 AIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQ 230 (323)
Q Consensus 152 ~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t 230 (323)
+|+..++.+..+.+.+.+.++|.++++ ++|+|+|+..+++++++||+ +..++|+++|.+....|.++. .++.++
T Consensus 242 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl-~~~~~P~i~i~~~~~~y~~~~----~~~~~~ 316 (382)
T 2r2j_A 242 LFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQK-TPADCPVIAIDSFRHMYVFGD----FKDVLI 316 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTC-CGGGCSEEEEECSSCEEECCC----SGGGGS
T ss_pred EEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCC-CccCCCEEEEEcchhcCCCCc----cccccC
Confidence 888754334456677888888888988 99999999999999999999 666899999988755565431 123467
Q ss_pred HHHHHHHHHHHHcCcccccccCC--CCCC
Q 020623 231 GSQISRFLEGYREGRTEQKKVAG--PSIF 257 (323)
Q Consensus 231 ~~~I~~Fi~~~~~Gkl~~~~kSe--P~~~ 257 (323)
.++|.+|++++++|+++|++||+ |+.+
T Consensus 317 ~~~i~~F~~d~~~Gkl~p~~kse~~P~~~ 345 (382)
T 2r2j_A 317 PGKLKQFVFDLHSGKLHREFHHGPDPTDT 345 (382)
T ss_dssp TTHHHHHHHHHHHTTTSSCC---------
T ss_pred HHHHHHHHHHHHCCCccccccCCCCCCCC
Confidence 89999999999999999999999 5544
No 6
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.97 E-value=6.1e-29 Score=233.98 Aligned_cols=234 Identities=19% Similarity=0.286 Sum_probs=193.9
Q ss_pred CCcccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHH-hcCCcccEEEEecCC--h---hHHHHHHHhhcCceeE
Q 020623 2 HGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAWF 75 (323)
Q Consensus 2 ~G~~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~-~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~F 75 (323)
+|.+.+|.|+|+++.|++|++++++|++..|+|.++++++++ +++ +++|||+.+ + ..|.++|..+++++.|
T Consensus 98 ~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f 174 (350)
T 1sji_A 98 GDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQ---IKLIGFFKSEESEYYKAFEEAAEHFQPYIKF 174 (350)
T ss_dssp TTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTSHHHHHHHHHHHHTTTTSEE
T ss_pred CCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCC---cEEEEEECCCCcHHHHHHHHHHHhhccCcEE
Confidence 577789999999999999999999999999999999999998 666 478998753 2 4788999999999999
Q ss_pred EeecccchhhHhhcCCCCCCeEEEecCCCCCCccccCC-CCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCC-cEEE-E
Q 020623 76 AVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKR-KIVL-A 152 (323)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~-~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~-~~v~-~ 152 (323)
+.+ .+++++.++++. .|+|++|++..+....|.|+ ++.++|.+||+.+++|+|+++|.+|+..++..+. ++++ +
T Consensus 175 ~~~--~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~l~ 251 (350)
T 1sji_A 175 FAT--FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVA 251 (350)
T ss_dssp EEE--CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSCSSSEEEEE
T ss_pred EEE--CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCCCCCcEEEE
Confidence 988 467899999997 89999999865667789887 8999999999999999999999999999987654 5543 3
Q ss_pred EEeCCChhHHHHHHHHHHHHHHhCCC---eEEEEEcCcchhhHh----hhcCCcCCCCCCeEEEEeC-Cc-ceee-ccCC
Q 020623 153 IVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWDG-NE-NYLT-VIGS 222 (323)
Q Consensus 153 f~~~~~~e~~~~~~~~l~~~A~~~~~---l~F~~vd~~~~~~~~----~~~gl~~~~~~P~ivI~~~-~~-kY~~-~~~~ 222 (323)
|... +.....++.+.|+++|+++++ +.|+|+|+..+++++ +.||+ + .++|+++|++. ++ +|.+ +++.
T Consensus 252 f~~~-~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi-~-~~~P~~~i~~~~~~~~~~~~~~~~ 328 (350)
T 1sji_A 252 FAER-SDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKI-D-LFKPQIGVVNVTDADSVWMEIPDD 328 (350)
T ss_dssp ECCT-TSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCS-C-TTSCEEEEEESSSSCEEESCSSCC
T ss_pred EEcC-CCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCC-C-ccCCcEEEEecccccccccCCCcc
Confidence 4432 222356788999999999972 999999999888877 78999 5 57899999997 33 6753 3211
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 223 ESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 223 ~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
+++++.++|.+|++++++|+++
T Consensus 329 ---~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 329 ---DDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp ---SCCCCHHHHHHHHHHHHTSCC-
T ss_pred ---cccCCHHHHHHHHHHHhcCccC
Confidence 3468999999999999999974
No 7
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.97 E-value=2.4e-30 Score=244.04 Aligned_cols=254 Identities=19% Similarity=0.243 Sum_probs=210.2
Q ss_pred HHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC--h---hHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCC
Q 020623 21 LKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVP 95 (323)
Q Consensus 21 l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p 95 (323)
++.-..+++..|+|.+++++|++.++ +++|||+.+ + ..|.++|..+ +++.|+++ .+++++.++++. .|
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~---~~vvgff~~~~~~~~~~f~~~A~~~-~~~~F~~t--~~~~v~~~~~v~-~~ 83 (361)
T 3uem_A 11 FQGPGSEFATTLPDGAAAESLVESSE---VAVIGFFKDVESDSAKQFLQAAEAI-DDIPFGIT--SNSDVFSKYQLD-KD 83 (361)
T ss_dssp TSCCCCSSSEECCSHHHHHHHHHTSS---EEEEEECSCTTSHHHHHHHHHHHHC-SSSCEEEE--CCHHHHHHTTCS-SS
T ss_pred ecCCccccceecCCHHHHHHHHhcCC---cEEEEEEcCCCchHHHHHHHHHhcC-CCceEEEE--CcHHHHHHhCCC-CC
Confidence 33445567899999999999999988 589999753 1 4788999988 68999988 578899999985 59
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcE-EEEEEeCCChhHHHHHHHHHHHHHH
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKI-VLAIVEDETEEKSQKLVTTLKAAAS 174 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~-v~~f~~~~~~e~~~~~~~~l~~~A~ 174 (323)
+|++||+..+....|+|+++.++|.+||+.+.+|+|.++|++++..++..+.+. +++|+.. ..+..+++...|+++|+
T Consensus 84 ~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~-~~~~~~~~~~~~~~~A~ 162 (361)
T 3uem_A 84 GVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK-SVSDYDGKLSNFKTAAE 162 (361)
T ss_dssp EEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCS-SSSSHHHHHHHHHHHHG
T ss_pred eEEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeC-CchhHHHHHHHHHHHHH
Confidence 999999866677789999999999999999999999999999999998876544 4556543 23456788999999999
Q ss_pred hCCC-eEEEEEcCc--chhhHhhhcCCcCCCCCCeEEEEeCC---cceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 175 ANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGN---ENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 175 ~~~~-l~F~~vd~~--~~~~~~~~~gl~~~~~~P~ivI~~~~---~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
++++ ++|+++|++ .++++++.||+ +..++|.+++++.. .+|.+. .+..+.++|.+|++++++|+++|
T Consensus 163 ~~~~~i~f~~vd~~~~~~~~~~~~fgi-~~~~~P~~~~~~~~~~~~ky~~~------~~~~~~~~l~~fi~~~l~g~~~~ 235 (361)
T 3uem_A 163 SFKGKILFIFIDSDHTDNQRILEFFGL-KKEECPAVRLITLEEEMTKYKPE------SEELTAERITEFCHRFLEGKIKP 235 (361)
T ss_dssp GGTTTCEEEEECTTSGGGHHHHHHTTC-CTTTCSEEEEEECC--CCEECCS------SCCCCHHHHHHHHHHHHTTCSCC
T ss_pred HccCceEEEEecCChHHHHHHHHHcCC-CccCCccEEEEEcCCcccccCCC------ccccCHHHHHHHHHHHhcCCCcc
Confidence 9998 999999998 67889999999 66679999998873 266542 24689999999999999999999
Q ss_pred cccCC--CCCC--CCeeEEeccCcceehHH--HHHHHHHHHHhcCCC
Q 020623 249 KKVAG--PSIF--GFVNSLIGIRSVYIIVF--MVAMLMLLRTLGKDD 289 (323)
Q Consensus 249 ~~kSe--P~~~--g~v~~vVg~~~~~iv~~--~~~~~~~~~~~~~~~ 289 (323)
+.+|+ |+.+ ++|+.++|.+|..+++- -..++.+..+||++|
T Consensus 236 ~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C 282 (361)
T 3uem_A 236 HLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHC 282 (361)
T ss_dssp CCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHH
T ss_pred cccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhH
Confidence 99998 5543 89999999998877642 245666778888888
No 8
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.96 E-value=5e-28 Score=214.54 Aligned_cols=202 Identities=18% Similarity=0.256 Sum_probs=169.1
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC-----hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEEecCC
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD-----ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPS 103 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~-----~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv~k~~ 103 (323)
+..|+|.+++++|++.++ +++|||+.+ .+.|.++|..++ ++.|+++ .+++++.+++++ .|+|++||+.
T Consensus 11 ~~~l~s~~~~~~~l~~~~---v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~t--~~~~v~~~~~v~-~p~i~lfk~~ 83 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGIS--TDSEVLTHYNIT-GNTICLFRLV 83 (227)
T ss_dssp CEECCSHHHHHHHHHTSS---EEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEEE--CCHHHHHHTTCC-SSEEEEEETT
T ss_pred CeeeCCHHHHHHHHhcCC---eEEEEEecCCCchhHHHHHHHHHhCC-CceEEEE--CCHHHHHHcCCC-CCeEEEEEec
Confidence 567889999999999887 589999753 247999999994 8999988 577899999986 4999999975
Q ss_pred CCCCcccc----CCCCHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcEEEE-EEeCCChhHHHHHHHHHHHHHHhCCC
Q 020623 104 YNEHNIFY----GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLA-IVEDETEEKSQKLVTTLKAAASANRE 178 (323)
Q Consensus 104 ~~~~~~y~----g~~~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~-f~~~~~~e~~~~~~~~l~~~A~~~~~ 178 (323)
.++...|+ |+++.++|.+||+.+++|+|+++|.+|+..++..+.|++++ |++. +.++.+++.+.++++|+++++
T Consensus 84 ~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~-~~~~~~~~~~~~~~vAk~~k~ 162 (227)
T 4f9z_D 84 DNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNK-ASPEYEENMHRYQKAAKLFQG 162 (227)
T ss_dssp TTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECT-TSTTHHHHHHHHHHHHHHTTT
T ss_pred CcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcC-CcchHHHHHHHHHHHHHHhhC
Confidence 45556777 47999999999999999999999999999999888777654 5453 234567888999999999999
Q ss_pred -eEEEEEcCc--chhhHhhhcCCcCCCCCCeEEEEeCC-c-ceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 179 -LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGN-E-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 179 -l~F~~vd~~--~~~~~~~~~gl~~~~~~P~ivI~~~~-~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
++|+|+|++ ++++++++||+ +..++|+++|++.. . +|.++ .+++|.++|.+|+++|++||
T Consensus 163 ~i~F~~vd~~~~~~~~~l~~fgl-~~~~~P~~~i~~~~~~~ky~~~------~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 163 KILFILVDSGMKENGKVISFFKL-KESQLPALAIYQTLDDEWDTLP------TAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp TCEEEEEETTSGGGHHHHHHTTC-CGGGCSEEEEEESSSCCEEEET------TCCCCHHHHHHHHHHHHTTC
T ss_pred CEEEEEeCCccHhHHHHHHHcCC-CcccCCEEEEEECCCCccccCC------cCCCCHHHHHHHHHHHhCCC
Confidence 999999996 57889999999 66689999999974 3 46553 24589999999999999996
No 9
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.96 E-value=1.8e-29 Score=248.39 Aligned_cols=268 Identities=16% Similarity=0.205 Sum_probs=217.3
Q ss_pred ccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC--h---hHHHHHHHhhcCceeEEeec
Q 020623 5 PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--E---SVMSNLALKYKKKAWFAVAK 79 (323)
Q Consensus 5 ~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--~---~~f~~~A~~~~~~~~F~~~~ 79 (323)
+..|.|.|+++.|++|+.++++|++..|++ +++|++.++.. +.+|||+.+ + ..|.++|..+++++.|+++.
T Consensus 101 ~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~-~~~v~~f~~~~~~~~~~f~~~A~~~~~~~~F~~~~ 176 (504)
T 2b5e_A 101 SIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFV-TPVIVQSGKIDADFNATFYSMANKHFNDYDFVSAE 176 (504)
T ss_dssp EEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCS-SCEEEEEESCCHHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred ceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCc-eEEEEEeCCCCchHHHHHHHHHHHhhcCcEEEEEH
Confidence 778999999999999999999999999987 88899887710 257777643 2 47889999999999999873
Q ss_pred ccchhhHhhcCCCCCCeEEEecCCCCCCccccCC-C---CHHHHHHHHHhhcCCCeeecChhhHHHhhcCCCcEEEEEEe
Q 020623 80 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-F---DEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVE 155 (323)
Q Consensus 80 ~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~-~---~~~~L~~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~ 155 (323)
+++.++++. +++|++. +....|.|+ + +.+.|.+||..+++|+++++|.+|+..++..+.+++++++.
T Consensus 177 ----~~~~~~~~~----i~l~~~~-~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~ 247 (504)
T 2b5e_A 177 ----NADDDFKLS----IYLPSAM-DEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYN 247 (504)
T ss_dssp ----CTTSCCEEE----EEETTEE-EEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEES
T ss_pred ----HHHHhcCCe----EEecCCC-CcccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEec
Confidence 566666652 8888873 466678898 7 89999999999999999999999999999988898887765
Q ss_pred CCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCC--cceeecc-CC-----CCCC
Q 020623 156 DETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN--ENYLTVI-GS-----ESID 226 (323)
Q Consensus 156 ~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~--~kY~~~~-~~-----~~~~ 226 (323)
. .+..+.+.+.++++|+++++ ++|+|+|+..++++++.||+ . .++|+++|++.. .+|.+.. +. ....
T Consensus 248 ~--~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~~~~~~~~gl-~-~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~ 323 (504)
T 2b5e_A 248 D--EEELEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNM-K-EQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDK 323 (504)
T ss_dssp S--HHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHHTTHHHHTTC-C-SCSSEEEEEETTTTEEEECCCCCHHHHHTCCSC
T ss_pred C--cccHHHHHHHHHHHHHhcCCeeEEEEEehhhhHHHHHHcCC-c-ccCCEEEEEeCCcCcccCCCCCccchhhccccc
Confidence 3 34447788999999999998 99999999988899999999 3 689999999973 3665431 10 0001
Q ss_pred CCCCHHHHHHHHHHHHcCcccccccCC--CCCC-CCeeEEeccCcceehHH--HHHHHHHHHHhcCCC
Q 020623 227 EEDQGSQISRFLEGYREGRTEQKKVAG--PSIF-GFVNSLIGIRSVYIIVF--MVAMLMLLRTLGKDD 289 (323)
Q Consensus 227 ~~~t~~~I~~Fi~~~~~Gkl~~~~kSe--P~~~-g~v~~vVg~~~~~iv~~--~~~~~~~~~~~~~~~ 289 (323)
..++.+.|.+|+++++.|++.|..+|+ |..+ +.|..++|.+|..+++- -..++.+..+||++|
T Consensus 324 ~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C 391 (504)
T 2b5e_A 324 IVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHC 391 (504)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHH
T ss_pred cccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhH
Confidence 127899999999999999999999998 5444 89999999998876643 245667778899988
No 10
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.88 E-value=5.1e-22 Score=164.41 Aligned_cols=128 Identities=18% Similarity=0.285 Sum_probs=101.3
Q ss_pred HHHhhcCCCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcC--cchhhHhhhcCC
Q 020623 122 FIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGI--KQFADFADTFEA 198 (323)
Q Consensus 122 fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~--~~~~~~~~~~gl 198 (323)
.++++++|+|+++|.+|+..|+.++.|++++++...+.++.+.+.+.++++|++|+| ++|+++|. ..+++.+++||+
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl 86 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGL 86 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTC
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCC
Confidence 467899999999999999999998888876544322233477888999999999998 99999999 677788999999
Q ss_pred cCCCCCCeEEEEeC---CcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccccccCC--CCC
Q 020623 199 NKKSKLPKMVVWDG---NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAG--PSI 256 (323)
Q Consensus 199 ~~~~~~P~ivI~~~---~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~kSe--P~~ 256 (323)
+..++|+++|++. ..||.+. .++++.++|.+|+++|++|+|+|++||| |+.
T Consensus 87 -~~~~~P~v~i~~~~~~~~Ky~~~------~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 87 -KKEECPAVRLITLEEEMTKYKPE------SEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp -CGGGCSEEEEEECSSSCEEECCS------CCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred -CcccCCEEEEEecccccccCCCC------cccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 6678999999986 2467653 3468999999999999999999999999 766
No 11
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.81 E-value=3e-19 Score=184.28 Aligned_cols=226 Identities=15% Similarity=0.142 Sum_probs=173.7
Q ss_pred CCc-ccccCCCCChHHHHHHHHHhcCCCceecCCh---HHHHHHHHhcCCcccEEEEecCCh------hHHHHHHHhhcC
Q 020623 2 HGI-PTEYYGPRKAELLVRYLKKFVAPDVSILNSD---AEVSDFVENAGTFFPLFIGFGLDE------SVMSNLALKYKK 71 (323)
Q Consensus 2 ~G~-~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~---~~l~~fl~~~~~~~~~vVgf~~~~------~~f~~~A~~~~~ 71 (323)
+|. ..+|.|.|+++.|++|+++++++++..|++. +++++++..+. +++|+|++.. ..+.++|..+++
T Consensus 196 ~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~---~~vi~f~~~~~~~~~~~~~~~l~~~f~~ 272 (780)
T 3apo_A 196 SGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGV---GWLITFCSKGEDCLTSQTRLRLSGMLDG 272 (780)
T ss_dssp TTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTC---EEEEEEECTTSCCCCHHHHHHHHHHTTT
T ss_pred CCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCC---CEEEEEecCcccccCHHHHHHHHHHhhc
Confidence 565 5789999999999999999999999999887 68888887754 5788886421 234444444433
Q ss_pred ce------------------------------------------------------------------------------
Q 020623 72 KA------------------------------------------------------------------------------ 73 (323)
Q Consensus 72 ~~------------------------------------------------------------------------------ 73 (323)
.+
T Consensus 273 ~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~ 352 (780)
T 3apo_A 273 LVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHH 352 (780)
T ss_dssp TEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTS
T ss_pred cceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccC
Confidence 33
Q ss_pred -------------------------------eEEeecc-cchhhHhhcCCCCCCeEEEecCCC-CCCccccCCCCHHHHH
Q 020623 74 -------------------------------WFAVAKD-FSEDTMVLYDFDKVPALVALQPSY-NEHNIFYGPFDEEFLE 120 (323)
Q Consensus 74 -------------------------------~F~~~~~-~~~~~~~~~~~~~~p~ivv~k~~~-~~~~~y~g~~~~~~L~ 120 (323)
.|+.++. .+..++..+++. .|++++|++.. +....|+|.++.++|.
T Consensus 353 ~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~-~p~i~l~~~~~~e~~~~~~g~~~~~~i~ 431 (780)
T 3apo_A 353 RWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVF-QPSLAVFKGQGTKEYEIHHGKKILYDIL 431 (780)
T ss_dssp EEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCC-SCEEEEEESSTTSSEEECCSCCCHHHHH
T ss_pred CeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhcccc-CChhhhccCCCcceeeecccHhhHHHHH
Confidence 3333321 133456677875 49999998854 2355788999999999
Q ss_pred HHHHhhcCCCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCc
Q 020623 121 EFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEAN 199 (323)
Q Consensus 121 ~fI~~~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~ 199 (323)
+|+..+..|+|.++|.+++..+ .++++++.|...- -..-..+...|+++|+++++ +.|+.+|+++.+.+++.||+
T Consensus 432 ~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~w-C~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v- 507 (780)
T 3apo_A 432 AFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPW-SPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNI- 507 (780)
T ss_dssp HHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTT-CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC-
T ss_pred HHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCC-CHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC-
Confidence 9999999999999999999887 5578877777631 23456788999999999987 99999999988889999999
Q ss_pred CCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 200 KKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 200 ~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
..+|.+++++..++|.+ .+..+.++|.+|++++++.
T Consensus 508 --~~~Pt~~~~~~g~~~~~-------~g~~~~~~l~~fi~~~~~~ 543 (780)
T 3apo_A 508 --QAYPTTVVFNQSSIHEY-------EGHHSAEQILEFIEDLRNP 543 (780)
T ss_dssp --CSSSEEEEEETTEEEEE-------CSCSCHHHHHHHHHHHHSC
T ss_pred --CcCCeEEEEcCCceeee-------cCcccHHHHHHHHHhhccc
Confidence 35999999876545544 3457899999999999873
No 12
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.74 E-value=2.5e-17 Score=133.50 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=103.8
Q ss_pred hcCCCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 126 NFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 126 ~~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
.++|++.++|.+|+..++.++.|+++.|... ....+.+...|+++|++|++ +.|+++|.++++++++.||+ +..+.
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi-~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAET--AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSC--SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTC-CSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecC--hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCC-CcccC
Confidence 4789999999999999888888988877653 23346788999999999998 99999999999999999999 66679
Q ss_pred CeEEEEeC--CcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccccccCC--CCCC
Q 020623 205 PKMVVWDG--NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAG--PSIF 257 (323)
Q Consensus 205 P~ivI~~~--~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~kSe--P~~~ 257 (323)
|+++|++. ..+|.+.. ++.++.++|.+|++++++|+++|++||| |+.+
T Consensus 80 Ptl~i~~~~~g~~~~~~~-----~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQ-----EKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SEEEEECTTTCCBCCCCS-----SSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred CEEEEEecCcCcccCCCC-----ccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 99999986 34554311 2568999999999999999999999999 6543
No 13
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.66 E-value=1.7e-14 Score=148.78 Aligned_cols=235 Identities=12% Similarity=0.103 Sum_probs=180.5
Q ss_pred CCcccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCce
Q 020623 2 HGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKA 73 (323)
Q Consensus 2 ~G~~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~ 73 (323)
+|....|.|.++++.|.+|+.+...|+|..|+ .+++++++...+...+++|.|+.. .+.|.++|..+++.+
T Consensus 518 ~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v 596 (780)
T 3apo_A 518 QSSIHEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLI 596 (780)
T ss_dssp TTEEEEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCceeeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCe
Confidence 35567899999999999999999999999995 689999887632111467777642 247889999999888
Q ss_pred eEEeeccc-chhhHhhcCCCCCCeEEEecCCCCC---CccccC-CCCHHHHHHHHHhhcCCCeeecChhhHHH-hhcCCC
Q 020623 74 WFAVAKDF-SEDTMVLYDFDKVPALVALQPSYNE---HNIFYG-PFDEEFLEEFIKQNFLPLSVPINQDTLNL-LKDDKR 147 (323)
Q Consensus 74 ~F~~~~~~-~~~~~~~~~~~~~p~ivv~k~~~~~---~~~y~g-~~~~~~L~~fI~~~~~Plv~~~t~~~~~~-~~~~~~ 147 (323)
.|+.++.. ...++.++++.+.|+|++|+.+... ...|.| ..+.++|.+||..+..|.+.+++.+++.. +...++
T Consensus 597 ~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~~~~ 676 (780)
T 3apo_A 597 NVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQGKT 676 (780)
T ss_dssp EEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTTTCSS
T ss_pred EEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHhcCCC
Confidence 88877532 4567788999899999999875332 345888 88999999999999999999999999975 556678
Q ss_pred cEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCc-ceeeccCCCCC
Q 020623 148 KIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESI 225 (323)
Q Consensus 148 ~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~-kY~~~~~~~~~ 225 (323)
++++.|... .-..-+.+...+.++|+++++ +.|+.+|.+..+.+++.||+ ...|.++++...+ ...+. |..
T Consensus 677 ~v~v~F~a~-wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~-G~~-- 749 (780)
T 3apo_A 677 HWVVDFYAP-WSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSVKLYQYERAKKSIW-EEQ-- 749 (780)
T ss_dssp CEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEEEEEETTTTEEE-EEE--
T ss_pred eEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCC---CcCCEEEEEcCCCcccccc-Ccc--
Confidence 887777653 112345677889999999987 99999999988888999999 5799998874322 21121 100
Q ss_pred CCCCCHHHHHHHHHHHHcC
Q 020623 226 DEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 226 ~~~~t~~~I~~Fi~~~~~G 244 (323)
-+..+.+.|.+||+..+..
T Consensus 750 ~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 750 INSRDAKTIAALIYGKLET 768 (780)
T ss_dssp ECCCCHHHHHHHHHHHTTC
T ss_pred cCCcCHHHHHHHHHHHHHH
Confidence 0246889999999999854
No 14
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.52 E-value=3.3e-12 Score=119.73 Aligned_cols=224 Identities=12% Similarity=0.161 Sum_probs=163.4
Q ss_pred CcccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecC-C-------hhHHHHHHHhhcCcee
Q 020623 3 GIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D-------ESVMSNLALKYKKKAW 74 (323)
Q Consensus 3 G~~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~-~-------~~~f~~~A~~~~~~~~ 74 (323)
+.+..|.|+.+++.|++|++....|.+..++ .+.+..+.+.... +++|.|.. + ...|.++|+++++.+.
T Consensus 93 ~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~-~~~~~~~~~~~~~--~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~ 169 (361)
T 3uem_A 93 EGRNNFEGEVTKENLLDFIKHNQLPLVIEFT-EQTAPKIFGGEIK--THILLFLPKSVSDYDGKLSNFKTAAESFKGKIL 169 (361)
T ss_dssp TSEEECCSCCCHHHHHHHHHHHSSCSEEECS-TTTHHHHHSCSCC--EEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCE
T ss_pred CCccccCCcCCHHHHHHHHHHcCCCcceecC-cccHHHHhcCCCC--cEEEEEEeCCchhHHHHHHHHHHHHHHccCceE
Confidence 4457899999999999999999999999995 5677777765542 34555543 2 1368899999998888
Q ss_pred EEeeccc---chhhHhhcCCCC--CCeEEEecCCCC-CCcccc-CCCCHHHHHHHHHhhcC------------------C
Q 020623 75 FAVAKDF---SEDTMVLYDFDK--VPALVALQPSYN-EHNIFY-GPFDEEFLEEFIKQNFL------------------P 129 (323)
Q Consensus 75 F~~~~~~---~~~~~~~~~~~~--~p~ivv~k~~~~-~~~~y~-g~~~~~~L~~fI~~~~~------------------P 129 (323)
|+.++.. ...++..+|+.. .|++++++...+ ..+.+. |.++.+.|.+|+....- .
T Consensus 170 f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~ 249 (361)
T 3uem_A 170 FIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 249 (361)
T ss_dssp EEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTS
T ss_pred EEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccC
Confidence 8877432 456788999876 899999986322 222333 78999999999998531 2
Q ss_pred CeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC---eEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 130 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 130 lv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~---l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
.+..++.+++..+. ..++++++.|... --..-+.+...+.++|+.+++ +.|+.+|+.... +..+++ ..+|
T Consensus 250 ~v~~l~~~~f~~~~~~~~k~~lv~f~a~-wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v---~~~P 323 (361)
T 3uem_A 250 PVKVLVGKNFEDVAFDEKKNVFVEFYAP-WCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKV---HSFP 323 (361)
T ss_dssp SSEEECTTTHHHHHTCTTCEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCC---CSSS
T ss_pred CcEEeecCchhhhcccCCCcEEEEEecC-cCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCC---cccC
Confidence 37788999998865 4567777777653 123446778899999999874 999999987543 567888 5789
Q ss_pred eEEEEeCC-c-ceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 206 KMVVWDGN-E-NYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 206 ~ivI~~~~-~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.++++..+ + ..... .+..+.+.|.+||+.-
T Consensus 324 t~~~~~~~~~~~~~~~------~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 324 TLKFFPASADRTVIDY------NGERTLDGFKKFLESG 355 (361)
T ss_dssp EEEEECSSSSCCCEEC------CSCSSHHHHHHHHTTT
T ss_pred eEEEEECCCCcceeEe------cCCCCHHHHHHHHHhc
Confidence 99999654 3 22222 3457899999999754
No 15
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.46 E-value=4e-13 Score=123.45 Aligned_cols=130 Identities=13% Similarity=0.182 Sum_probs=106.2
Q ss_pred ccccCCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC---hhHHHHHHHhhcCceeEEeeccc
Q 020623 5 PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD---ESVMSNLALKYKKKAWFAVAKDF 81 (323)
Q Consensus 5 ~~eY~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~---~~~f~~~A~~~~~~~~F~~~~~~ 81 (323)
+.+|.|+|+++.|++|+.+++++++..|.+.+++++|++.++. +.+++|..+ ...|.++|..+++.+.|+.+.
T Consensus 121 ~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~--~~vi~fs~~~~~~~~f~~~A~~~~~~~~F~~v~-- 196 (298)
T 3ed3_A 121 NEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPK--LSVVLFSKQDKISPVYKSIALDWLGKFDFYSIS-- 196 (298)
T ss_dssp EEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSS--EEEEEEESSSSCCHHHHHHHHHTBTTEEEEEEE--
T ss_pred ceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCc--eEEEEEcCCCcchHHHHHHHHHhhcCcEEEEEc--
Confidence 6799999999999999999999999999999999999987653 566667543 358999999999999998873
Q ss_pred chhhHh-----hcC-----C-------------CCCCeEEEecCCCCCCccccC-CCCHHHHHHHHH--hhcCCCeeecC
Q 020623 82 SEDTMV-----LYD-----F-------------DKVPALVALQPSYNEHNIFYG-PFDEEFLEEFIK--QNFLPLSVPIN 135 (323)
Q Consensus 82 ~~~~~~-----~~~-----~-------------~~~p~ivv~k~~~~~~~~y~g-~~~~~~L~~fI~--~~~~Plv~~~t 135 (323)
+.+++. +++ + .+.|+|++|++..++..+|.| .++.++|.+||. .+.+|+++++|
T Consensus 197 ~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls 276 (298)
T 3ed3_A 197 NKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFS 276 (298)
T ss_dssp GGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTS
T ss_pred chHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCc
Confidence 233332 121 1 358999999986667778985 789999999999 88999999999
Q ss_pred hhh
Q 020623 136 QDT 138 (323)
Q Consensus 136 ~~~ 138 (323)
..+
T Consensus 277 ~~~ 279 (298)
T 3ed3_A 277 RRS 279 (298)
T ss_dssp HHH
T ss_pred hHH
Confidence 855
No 16
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.45 E-value=2e-13 Score=109.33 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=86.6
Q ss_pred HHHHhcCCCcee--cCChHHHHHHHHhcCCcccEEEEecCC-----hhHHHHHHHhhcCceeEEeecccchhhHhhcCCC
Q 020623 20 YLKKFVAPDVSI--LNSDAEVSDFVENAGTFFPLFIGFGLD-----ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFD 92 (323)
Q Consensus 20 ~l~k~~~p~v~~--i~s~~~l~~fl~~~~~~~~~vVgf~~~-----~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~ 92 (323)
-|+++++|++.. |+|.+++++|++.++ +++||||.+ .+.|.++|..+ +++.|+++ .+++++.++++.
T Consensus 12 ~m~kq~gP~~~~~~i~s~~e~e~fi~~~~---v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t--~~~~v~~~~~v~ 85 (124)
T 2l4c_A 12 KSSDGPGAAQEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIS--TDSEVLTHYNIT 85 (124)
T ss_dssp SSCCCSCCSCCCEECCSHHHHHHHHHTSS---EEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEE--CCHHHHHHTTCC
T ss_pred HHHhccCCCCcceEcCCHHHHHHHHhcCC---CEEEEEECCCCChhHHHHHHHHHhC-CCceEEEE--ChHHHHHHcCCC
Confidence 367899999855 999999999998887 589999864 24788999999 89999998 568899999985
Q ss_pred CCCeEEEecCCCCCCccccC----CCCHHHHHHHHHhhcC
Q 020623 93 KVPALVALQPSYNEHNIFYG----PFDEEFLEEFIKQNFL 128 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g----~~~~~~L~~fI~~~~~ 128 (323)
.|+|++||+..+....|.| +++.++|++||+.|++
T Consensus 86 -~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 86 -GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp -SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred -CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 7999999986556678886 7999999999999874
No 17
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=2.2e-10 Score=105.08 Aligned_cols=204 Identities=17% Similarity=0.238 Sum_probs=144.3
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecc---cchhhHhhcCCCCC
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKD---FSEDTMVLYDFDKV 94 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~---~~~~~~~~~~~~~~ 94 (323)
.+.|..| +.+++++++.+.+. +++|-|... ...|.++|..+.+.+.++.++. ...+++.++++...
T Consensus 16 ~~~vv~l-t~~~f~~~i~~~~~--~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 16 DPHISEL-TPKSFDKAIHNTNY--TSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CTTCEEC-CHHHHHHHHTSSSS--CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCeEEe-CHHHHHHHHHhCCC--eEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3457888 57999999854432 577777542 2478899999887676665532 25678899999999
Q ss_pred CeEEEecCCCC----------------CCccccCCCCHHHHHHHHHhhcCCCeeecC-hhhHHHhhcC-CCcEEEEEEeC
Q 020623 95 PALVALQPSYN----------------EHNIFYGPFDEEFLEEFIKQNFLPLSVPIN-QDTLNLLKDD-KRKIVLAIVED 156 (323)
Q Consensus 95 p~ivv~k~~~~----------------~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t-~~~~~~~~~~-~~~~v~~f~~~ 156 (323)
|++++|+++.- ....|.|+.+.+.|.+||....-|.+..++ .+.+..+... ..+.+++|...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESS
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCC
Confidence 99999987420 134688999999999999999999999995 5678887765 35666665332
Q ss_pred CChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHh--hhcCCc---------------CCCCCCeEEEEeC-Cccee
Q 020623 157 ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFA--DTFEAN---------------KKSKLPKMVVWDG-NENYL 217 (323)
Q Consensus 157 ~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~--~~~gl~---------------~~~~~P~ivI~~~-~~kY~ 217 (323)
. .....++.+|..+++ +.|+.+......... +.|+.. .....|+|++++. ++++.
T Consensus 173 --~----~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 173 --D----KISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp --S----SCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred --C----cchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 1 122579999999998 999998765432222 233310 1257999999987 45655
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 218 TVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 218 ~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
...| +.++.+.|.+||.+-.+
T Consensus 247 ~y~g-----~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 247 EYEG-----NSINKNDISKFLRDTFS 267 (298)
T ss_dssp ECCC-----SSCCHHHHHHHHHHHHT
T ss_pred Eecc-----ccCCHHHHHHHHHhhcC
Confidence 5432 35899999999986443
No 18
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.32 E-value=9.7e-11 Score=102.94 Aligned_cols=200 Identities=16% Similarity=0.224 Sum_probs=146.8
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCc---eeEEeec-ccchhhHhhcCCCCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKK---AWFAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~---~~F~~~~-~~~~~~~~~~~~~~~ 94 (323)
..+..++ .+.++.++..++ +++|-|... ...+.++|..+.+. +.|+.++ +...+++.+|++...
T Consensus 15 ~~v~~l~-~~~~~~~~~~~~---~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 15 NGVLVLN-DANFDNFVADKD---TVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp TTEEEEC-TTTHHHHHTTCS---EEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred CCcEEec-ccCHHHHHhcCC---eEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 3577784 588999887766 567777543 24778888888754 6666553 235678899999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCC-------CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHH
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP-------LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVT 167 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~P-------lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~ 167 (323)
|++++|++ ++...|.|..+.+.|.+||....-| .+..++.+++..+...++++++.|...-- ..-+.+..
T Consensus 91 Pt~~~~~~--g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC-~~C~~~~p 167 (241)
T 3idv_A 91 PTIKILKK--GQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWC-GHCKKLAP 167 (241)
T ss_dssp SEEEEEET--TEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTC-TGGGGTHH
T ss_pred CEEEEEcC--CCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCC-HHHHHhHH
Confidence 99999975 3444578999999999999998766 47778899999887766777777765211 11233445
Q ss_pred HHHHHHHhCC----CeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 168 TLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 168 ~l~~~A~~~~----~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+.++|+.++ ++.|+.+|.+..+.+++.||+ ..+|.+++++..+... . .+..+.+.|.+|+++...
T Consensus 168 ~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~g~~~~-~------~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 168 EYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDV---SGYPTLKIFRKGRPYD-Y------NGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTC---CSSSEEEEEETTEEEE-C------CSCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCC---cccCEEEEEECCeEEE-e------cCCCCHHHHHHHHHhhhC
Confidence 5666666643 399999999988889999999 4799999987544333 2 345789999999998754
No 19
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.24 E-value=1.2e-09 Score=102.11 Aligned_cols=200 Identities=13% Similarity=0.163 Sum_probs=147.3
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC-------hhH-------HHHHHHhhcC-ceeEEeecc-cchhhHhhcCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD-------ESV-------MSNLALKYKK-KAWFAVAKD-FSEDTMVLYDF 91 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~-------~~~-------f~~~A~~~~~-~~~F~~~~~-~~~~~~~~~~~ 91 (323)
.|..| +.+++++++++++ +++|-|... .+. |.++|..+.+ .+.|+.++. ...+++.++++
T Consensus 12 ~v~~l-~~~~f~~~i~~~~---~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v 87 (350)
T 1sji_A 12 RVVSL-TEKNFKQVLKKYD---VLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGF 87 (350)
T ss_dssp CCEEE-CHHHHHHHHTTCS---EEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTC
T ss_pred ccEEC-CHHHHHHHHhhCC---eEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCC
Confidence 47778 5788999887766 577777532 133 8899998876 477776643 35678999999
Q ss_pred CCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecC-hhhHHHhhc-CCCcEEEEEEeCCChhHHHHHHHHH
Q 020623 92 DKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN-QDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTL 169 (323)
Q Consensus 92 ~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t-~~~~~~~~~-~~~~~v~~f~~~~~~e~~~~~~~~l 169 (323)
.+.|++++|+++ ....|.|..+.+.|.+||.+..-|.+.+++ .+++..+.. ...+.++.|+.. .. ......+
T Consensus 88 ~~~Pt~~~~~~g--~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~--~~--~~~~~~~ 161 (350)
T 1sji_A 88 DEEGSLYVLKGD--RTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKS--EE--SEYYKAF 161 (350)
T ss_dssp CSTTEEEEEETT--EEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSC--TT--SHHHHHH
T ss_pred CccceEEEEECC--cEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECC--CC--cHHHHHH
Confidence 999999999863 345688999999999999999999999995 678888776 455555666543 11 2345789
Q ss_pred HHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeC-CcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 170 KAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 170 ~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~-~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
.++|..+++ +.|+++.. +.+++.+|+ + .|.++++.+ +++.....| ...+.+.|.+|++......+.
T Consensus 162 ~~~A~~~~~~~~f~~~~~---~~~~~~~~v-~---~p~i~~~~~~~~~~~~y~g-----~~~~~~~l~~fi~~~~~p~v~ 229 (350)
T 1sji_A 162 EEAAEHFQPYIKFFATFD---KGVAKKLSL-K---MNEVDFYEPFMDEPIAIPD-----KPYTEEELVEFVKEHQRPTLR 229 (350)
T ss_dssp HHHHHHTTTTSEEEEECC---HHHHHHHTC-C---TTCEEEECTTCSSCEECSS-----SSCCHHHHHHHHHHHCCCSEE
T ss_pred HHHHHhhccCcEEEEECC---HHHHHHcCC-C---CCcEEEEeCCCCCceecCC-----CCCCHHHHHHHHHHcCccchh
Confidence 999999987 99998854 356788899 4 899999886 333333322 137899999999987655444
Q ss_pred cc
Q 020623 248 QK 249 (323)
Q Consensus 248 ~~ 249 (323)
..
T Consensus 230 el 231 (350)
T 1sji_A 230 RL 231 (350)
T ss_dssp EC
T ss_pred hc
Confidence 43
No 20
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.21 E-value=2.7e-09 Score=103.66 Aligned_cols=227 Identities=11% Similarity=0.183 Sum_probs=161.5
Q ss_pred CcccccC-CCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEe-cCC----h-------hHHHHHHHhh
Q 020623 3 GIPTEYY-GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGF-GLD----E-------SVMSNLALKY 69 (323)
Q Consensus 3 G~~~eY~-G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf-~~~----~-------~~f~~~A~~~ 69 (323)
+.+..|. |..+.+.|.+|+....-|.+..++. +.+..+.+ .+ .++.| ..+ . +.+.++|+++
T Consensus 193 ~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-~n~~~~~~-~~----~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~ 266 (481)
T 3f8u_A 193 DKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLIQG-KD----LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKF 266 (481)
T ss_dssp CSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-TTHHHHTT-SS----EEEEEECCCTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCCHHHHHHHHHHhCCCCccccCh-hHHHHhcC-CC----ceEEEEecccccchhhHHHHHHHHHHHHHHh
Confidence 4457788 8899999999999999999999964 56666653 33 33433 221 1 2367889999
Q ss_pred cCc---eeEEeeccc-chhhHhhcCCC----CCCeEEEecCCCCCCccccCCCCHH--HHHHHHHhhc------------
Q 020623 70 KKK---AWFAVAKDF-SEDTMVLYDFD----KVPALVALQPSYNEHNIFYGPFDEE--FLEEFIKQNF------------ 127 (323)
Q Consensus 70 ~~~---~~F~~~~~~-~~~~~~~~~~~----~~p~ivv~k~~~~~~~~y~g~~~~~--~L~~fI~~~~------------ 127 (323)
++. +.|+.++.. -...+..+|++ ..|.++++.. .+..+.+.+.++.+ .|++|+....
T Consensus 267 ~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~ 345 (481)
T 3f8u_A 267 LDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEP 345 (481)
T ss_dssp HHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCC
T ss_pred cCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCC
Confidence 877 888877432 23455677775 4788888863 34556667888888 9999998642
Q ss_pred -----CCCeeecChhhHHHhhcC-CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC---eEEEEEcCcchhhHhhhcCC
Q 020623 128 -----LPLSVPINQDTLNLLKDD-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFADTFEA 198 (323)
Q Consensus 128 -----~Plv~~~t~~~~~~~~~~-~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~---l~F~~vd~~~~~~~~~~~gl 198 (323)
-..+..++.+++..+... ++++++.|... -=..-+.+...+.++|+.+++ +.|+.+|.+.. .+...|++
T Consensus 346 ~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~-wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v 423 (481)
T 3f8u_A 346 IPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAP-WCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEV 423 (481)
T ss_dssp CCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECT-TBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCC
T ss_pred CCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecC-cChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCC
Confidence 125677888899876544 67777777752 123446777889999999874 99999999764 56677888
Q ss_pred cCCCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 199 NKKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
..+|.+++++.+++ -... .+..+.+.|.+||+......+.
T Consensus 424 ---~~~Pt~~~~~~~~~~~~~~~------~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 424 ---RGFPTIYFSPANKKLNPKKY------EGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp ---CSSSEEEEECTTCTTSCEEC------CSCCSHHHHHHHHHHHCSSCCC
T ss_pred ---cccCEEEEEeCCCeEeeeEe------CCCCCHHHHHHHHHHhcCCccc
Confidence 57999999887543 2222 3457899999999998765544
No 21
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.20 E-value=1e-09 Score=103.39 Aligned_cols=196 Identities=13% Similarity=0.173 Sum_probs=144.3
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC---h----h-------HHHHHHHhhcC-ceeEEeecc-cchhhHhhcCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD---E----S-------VMSNLALKYKK-KAWFAVAKD-FSEDTMVLYDF 91 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~---~----~-------~f~~~A~~~~~-~~~F~~~~~-~~~~~~~~~~~ 91 (323)
.|..| +.+.++++++.++ +++|-|... . . .+.++|..+.. .+.|+.++. ...+++.+|++
T Consensus 14 ~v~~l-t~~~f~~~i~~~~---~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V 89 (367)
T 3us3_A 14 RVINV-NAKNYKNVFKKYE---VLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL 89 (367)
T ss_dssp CCEEC-CTTTHHHHHHHCS---EEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTC
T ss_pred ccEEC-CHHHHHHHHhhCC---eEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCC
Confidence 47778 5689999998776 467777542 1 2 57788888865 477877643 36788999999
Q ss_pred CCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecC-hhhHHHhhc-CCCcEEEEEEeCCChhHHHHHHHHH
Q 020623 92 DKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN-QDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTL 169 (323)
Q Consensus 92 ~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t-~~~~~~~~~-~~~~~v~~f~~~~~~e~~~~~~~~l 169 (323)
.+.|++++|+++ ....|.|..+.+.|.+||.++.-|.+.+++ .+++..+.. .....++.|+.. .. ......+
T Consensus 90 ~~~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~--~~--~~~~~~f 163 (367)
T 3us3_A 90 TEEDSIYVFKED--EVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKN--KD--SEHYKAF 163 (367)
T ss_dssp CSTTEEEEEETT--EEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSC--TT--CHHHHHH
T ss_pred CcCceEEEEECC--cEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECC--CC--chHHHHH
Confidence 999999999963 445788999999999999999999999996 578888876 445556666542 11 2455688
Q ss_pred HHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeC-CcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 170 KAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 170 ~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~-~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
.++|..+++ +.|+.+.. +.+++.+|+ + .|.|++... ++....+.| +..+.+.|.+||+...-..
T Consensus 164 ~~~A~~~~~~~~F~~~~~---~~~~~~~~v-~---~p~i~lf~~~~~~~~~y~g-----~~~~~~~l~~fi~~~~~p~ 229 (367)
T 3us3_A 164 KEAAEEFHPYIPFFATFD---SKVAKKLTL-K---LNEIDFYEAFMEEPVTIPD-----KPNSEEEIVNFVEEHRRST 229 (367)
T ss_dssp HHHHHHHTTTSCEEEECC---HHHHHHHTC-C---TTCEEEECTTCSSCEECSS-----SSCCHHHHHHHHHHTCSCS
T ss_pred HHHHHhhcCCcEEEEECC---HHHHHHcCC-C---CCeEEEEcCCCCCCeecCC-----CCCCHHHHHHHHHHcCccc
Confidence 999999987 99998864 356788999 4 399998876 232222222 2478999999998865443
No 22
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.14 E-value=9.3e-09 Score=89.84 Aligned_cols=195 Identities=14% Similarity=0.133 Sum_probs=137.6
Q ss_pred ChHHHHHHH-HhcCCcccEEEEec-CC--h----------hHHHHHHHhh--cCceeEEeecc-cchhhHhhcCCCCCCe
Q 020623 34 SDAEVSDFV-ENAGTFFPLFIGFG-LD--E----------SVMSNLALKY--KKKAWFAVAKD-FSEDTMVLYDFDKVPA 96 (323)
Q Consensus 34 s~~~l~~fl-~~~~~~~~~vVgf~-~~--~----------~~f~~~A~~~--~~~~~F~~~~~-~~~~~~~~~~~~~~p~ 96 (323)
+.+++++++ ++... +++|-++ ++ . +.+.++|..+ .+.+.|+..+. ...+++.+|++...|+
T Consensus 7 ~~~~l~~~~~~~~~~--~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 84 (229)
T 2ywm_A 7 VRMQLKELAQKEFKE--PVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPT 84 (229)
T ss_dssp HHHHHHHHHHHHCCS--CEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSE
T ss_pred HHHHHHHHHHHhccC--CeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcE
Confidence 456777877 34332 3444433 22 1 2566677666 55677776642 3678899999999999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhhc--CCCeeecChhhHHHhhcCCCcE-EEEEEeCCChhHHHHHHHHHHHHH
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQNF--LPLSVPINQDTLNLLKDDKRKI-VLAIVEDETEEKSQKLVTTLKAAA 173 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~--~Plv~~~t~~~~~~~~~~~~~~-v~~f~~~~~~e~~~~~~~~l~~~A 173 (323)
+++|+. ......|.|..+.++|..|+.... -+.+..++.+++..+...+.++ ++.|... .=..-+.+...+.++|
T Consensus 85 l~~~~~-~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~-wC~~C~~~~~~~~~~~ 162 (229)
T 2ywm_A 85 IVIEGD-KDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTT-SCGYCPSAAVMAWDFA 162 (229)
T ss_dssp EEEESS-SCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECT-TCTTHHHHHHHHHHHH
T ss_pred EEEECC-CcccceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECC-CCcchHHHHHHHHHHH
Confidence 999974 234456888888888999998753 2457889999999887666777 4446553 1123456778899999
Q ss_pred HhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 174 SANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 174 ~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++++++.|+.+|.+..+.+++.||+ ..+|.+++ +++.... .+..+.+.|.+|++..++.
T Consensus 163 ~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~---~G~~~~~------~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 163 LANDYITSKVIDASENQDLAEQFQV---VGVPKIVI---NKGVAEF------VGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp HHCTTEEEEEEEGGGCHHHHHHTTC---CSSSEEEE---GGGTEEE------ESCCCHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEEEECCCCHHHHHHcCC---cccCEEEE---CCEEEEe------eCCCCHHHHHHHHHHHhhh
Confidence 9996699999999988888999999 57999988 3332212 2346788999999988753
No 23
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.99 E-value=4.5e-08 Score=95.71 Aligned_cols=226 Identities=12% Similarity=0.185 Sum_probs=157.4
Q ss_pred ccccCCC-C---ChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC-------hhHHHHHHHhhcCce
Q 020623 5 PTEYYGP-R---KAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-------ESVMSNLALKYKKKA 73 (323)
Q Consensus 5 ~~eY~G~-R---~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~-------~~~f~~~A~~~~~~~ 73 (323)
+..|.|. . +.+.|.+|+....-|.+..++ .+.+..+.+... ++++.|+.. ...+.++|.++++.+
T Consensus 195 ~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t-~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i 270 (504)
T 2b5e_A 195 PVVYNGKKADIADADVFEKWLQVEALPYFGEID-GSVFAQYVESGL---PLGYLFYNDEEELEEYKPLFTELAKKNRGLM 270 (504)
T ss_dssp EEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCC-HHHHHHHHHTTS---CEEEEEESSHHHHHHHHHHHHHHHHHTTTTC
T ss_pred ccccCCcccccCCHHHHHHHHHhcccCCcccCC-HhHHHHHhcCCC---cEEEEEecCcccHHHHHHHHHHHHHhcCCee
Confidence 4568887 5 999999999999999999994 678888876654 345544432 136788999999889
Q ss_pred eEEeeccc-chhhHhhcCC-CCCCeEEEecCCCCCCcccc--CC-----------CCHHHHHHHHHhhc-----------
Q 020623 74 WFAVAKDF-SEDTMVLYDF-DKVPALVALQPSYNEHNIFY--GP-----------FDEEFLEEFIKQNF----------- 127 (323)
Q Consensus 74 ~F~~~~~~-~~~~~~~~~~-~~~p~ivv~k~~~~~~~~y~--g~-----------~~~~~L~~fI~~~~----------- 127 (323)
.|+.++.. ...++..+|+ ...|.+++++.....++.+. ++ ++.+.|..|+....
T Consensus 271 ~F~~id~~~~~~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~ 350 (504)
T 2b5e_A 271 NFVSIDARKFGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQ 350 (504)
T ss_dssp EEEEEEHHHHTTHHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCC
T ss_pred EEEEEehhhhHHHHHHcCCcccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcC
Confidence 99887431 2235667777 24799999886323333333 44 78899999998652
Q ss_pred -C-----CCeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC----CeEEEEEcCcchhhHhhhc
Q 020623 128 -L-----PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTF 196 (323)
Q Consensus 128 -~-----Plv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~----~l~F~~vd~~~~~~~~~~~ 196 (323)
. ..+..++.+++.... ..++++++.|... -=..-+.+...+.++|+.++ ++.|+.+|.+... ... +
T Consensus 351 ~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~-wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~~-~ 427 (504)
T 2b5e_A 351 EIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAP-WCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND-VRG-V 427 (504)
T ss_dssp CCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECT-TCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC-CSS-C
T ss_pred CCCccccccceecccccHHHhhccCCCCEEEEEECC-CChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc-ccc-C
Confidence 1 247788889998764 4567888777752 11234567778888888775 4999999987542 334 7
Q ss_pred CCcCCCCCCeEEEEeCCcc---eeeccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 197 EANKKSKLPKMVVWDGNEN---YLTVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 197 gl~~~~~~P~ivI~~~~~k---Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
++ ...|.++++...++ ..+ .+..+.+.|.+||+.....++.
T Consensus 428 ~v---~~~Pt~~~~~~G~~~~~~~~-------~G~~~~~~l~~~i~~~~~~~~~ 471 (504)
T 2b5e_A 428 VI---EGYPTIVLYPGGKKSESVVY-------QGSRSLDSLFDFIKENGHFDVD 471 (504)
T ss_dssp CC---SSSSEEEEECCTTSCCCCBC-------CSCCCHHHHHHHHHHHCTTCCC
T ss_pred Cc---eecCeEEEEeCCceecceEe-------cCCCCHHHHHHHHHhcCCCCCC
Confidence 88 57999998854322 222 3456889999999998655443
No 24
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.99 E-value=3.8e-08 Score=85.54 Aligned_cols=198 Identities=13% Similarity=0.118 Sum_probs=134.7
Q ss_pred cCChHHHHHHH-HhcCCcccEEEEecC--C-------hhHHHHHHHhhcCceeEEeecc-c--chhhHhhcCCCCCCeEE
Q 020623 32 LNSDAEVSDFV-ENAGTFFPLFIGFGL--D-------ESVMSNLALKYKKKAWFAVAKD-F--SEDTMVLYDFDKVPALV 98 (323)
Q Consensus 32 i~s~~~l~~fl-~~~~~~~~~vVgf~~--~-------~~~f~~~A~~~~~~~~F~~~~~-~--~~~~~~~~~~~~~p~iv 98 (323)
..+.+++++++ +..... ++++.|.. . .+.+.++|.. .+.+.|+..+. . ..+++.+|++...|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 83 (226)
T 1a8l_A 6 DADKKVIKEEFFSKMVNP-VKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATT 83 (226)
T ss_dssp HHHHHHHHHHTGGGCCSC-EEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHHHHHHhcCCC-eEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEE
Confidence 34567777777 432221 34455543 2 1366777754 55677776642 2 45788899999999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhhcC--CCeeecChhhHHHhhcCCCcE-EEEEEeCCChhHHHHHHHHHHHHHHh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQNFL--PLSVPINQDTLNLLKDDKRKI-VLAIVEDETEEKSQKLVTTLKAAASA 175 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~~~--Plv~~~t~~~~~~~~~~~~~~-v~~f~~~~~~e~~~~~~~~l~~~A~~ 175 (323)
+|+++......|.|..+.+.+..|+....- .....++.+++..+...++++ ++.|... .=..-+.+...+.++|+.
T Consensus 84 ~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~-wC~~C~~~~p~~~~l~~~ 162 (226)
T 1a8l_A 84 ITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTP-TCPYCPLAVRMAHKFAIE 162 (226)
T ss_dssp EEETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECS-SCTTHHHHHHHHHHHHHH
T ss_pred EEcCCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCC-CCCccHHHHHHHHHHHHh
Confidence 997642223567787777788899877432 235678888988887666777 6666652 112235666778888888
Q ss_pred CC-----CeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 176 NR-----ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 176 ~~-----~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
++ ++.|+.+|.+..+.+++.||+ ..+|.+++....+ ...+ .+..+.+.|.+|++..+
T Consensus 163 ~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~~~~~~-------~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 163 NTKAGKGKILGDMVEAIEYPEWADQYNV---MAVPKIVIQVNGEDRVEF-------EGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHTTCCCEEEEEEEGGGCHHHHHHTTC---CSSCEEEEEETTEEEEEE-------ESCCCHHHHHHHHHHHH
T ss_pred cccccCCcEEEEEEEcccCHHHHHhCCC---cccCeEEEEeCCceeEEE-------cCCCCHHHHHHHHHHhh
Confidence 76 499999999988888899999 5799988876432 2222 23467789999998875
No 25
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.91 E-value=3.9e-08 Score=92.97 Aligned_cols=194 Identities=12% Similarity=0.110 Sum_probs=122.2
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhc------CceeEEeecc-cchhhHhhcCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYK------KKAWFAVAKD-FSEDTMVLYDFD 92 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~------~~~~F~~~~~-~~~~~~~~~~~~ 92 (323)
.|..|+ .++++.+++.++ +++|-|+.. ...|.++|..++ +.+.|+.++. ...+++.++++.
T Consensus 6 ~v~~l~-~~~f~~~~~~~~---~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 81 (382)
T 2r2j_A 6 EITSLD-TENIDEILNNAD---VALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRIS 81 (382)
T ss_dssp --CBCC-TTTHHHHHHHCS---EEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCC
T ss_pred ceEECC-HHHHHHHHhcCC---eEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCC
Confidence 366674 588888887776 577777543 247888998884 3467776643 357789999999
Q ss_pred CCCeEEEecCCCCCCc-cccCCCCHHHHHHHHHhhcCCCeeecCh-hhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHH
Q 020623 93 KVPALVALQPSYNEHN-IFYGPFDEEFLEEFIKQNFLPLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLK 170 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~-~y~g~~~~~~L~~fI~~~~~Plv~~~t~-~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~ 170 (323)
+.|++++|+++ .... .|.|..+.+.|.+||.+..-|.+..++. +.+.. +....+.+++|+...+ ....+.+.
T Consensus 82 ~~Pt~~~f~~G-~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~----~~~~~~f~ 155 (382)
T 2r2j_A 82 KYPTLKLFRNG-MMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKD----SDNYRVFE 155 (382)
T ss_dssp EESEEEEEETT-EEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSS----SHHHHHHH
T ss_pred cCCEEEEEeCC-cEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCC----ChhHHHHH
Confidence 99999999863 1112 5889999999999999999999999964 45666 4445566666665321 22356789
Q ss_pred HHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCC--cceeeccCCCCCCCCC-CHHHHHHHHHHHHcCc
Q 020623 171 AAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN--ENYLTVIGSESIDEED-QGSQISRFLEGYREGR 245 (323)
Q Consensus 171 ~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~--~kY~~~~~~~~~~~~~-t~~~I~~Fi~~~~~Gk 245 (323)
++|..+++ +.|+.+... +...+++ ...| ++..... .....+ ++.+ +.+.|.+||+...-..
T Consensus 156 ~~A~~~~~~~~F~~~~~~----~~~~~~v---~~~p-i~~~~~~~~~~~~~y------~g~~~~~~~l~~fi~~~~~p~ 220 (382)
T 2r2j_A 156 RVANILHDDCAFLSAFGD----VSKPERY---SGDN-IIYKPPGHSAPDMVY------LGAMTNFDVTYNWIQDKCVPL 220 (382)
T ss_dssp HHHHHHTTTCEEEEEESC----C-----------CE-EEEECSSSSSCCEEC------CSCTTCHHHHHHHHHHHHSCS
T ss_pred HHHHHhhccceEEEEehh----hHHhhCC---CCCc-eEECCCCCCCcCccc------CCCCCCHHHHHHHHHhcccCc
Confidence 99999987 888877652 3456677 3467 5444431 211222 2346 8899999999876443
No 26
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.72 E-value=2.6e-06 Score=75.02 Aligned_cols=195 Identities=13% Similarity=0.096 Sum_probs=126.8
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC---ceeEEeec---ccchhhHhhcCCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK---KAWFAVAK---DFSEDTMVLYDFD 92 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~---~~~F~~~~---~~~~~~~~~~~~~ 92 (323)
.+|..|+ .++++..+.+.+. +++|-|... ...|.++|.++.+ .+.|+.++ +...+++.++++.
T Consensus 12 ~~v~~l~-~~~f~~~i~~~~~--~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 12 DPLTLLQ-ADTVRGAVLGSRS--AWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP 88 (244)
T ss_dssp SSSEEEC-TTTHHHHHSSCSS--EEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCceeCC-hhhHHHHHhhCCC--eEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC
Confidence 3578885 5788877755543 577777643 2578899999876 67776664 2356789999999
Q ss_pred CCCeEEEecCCCC---CCc-cccCCCCHHHHHHHHHhhc----------CCCeeecChhhHHHhhc--CCCcEEEEEEeC
Q 020623 93 KVPALVALQPSYN---EHN-IFYGPFDEEFLEEFIKQNF----------LPLSVPINQDTLNLLKD--DKRKIVLAIVED 156 (323)
Q Consensus 93 ~~p~ivv~k~~~~---~~~-~y~g~~~~~~L~~fI~~~~----------~Plv~~~t~~~~~~~~~--~~~~~v~~f~~~ 156 (323)
..|++++|+++.. ... .+.| .+.+.|.+||.+.. .|.+...+..++..++. ...+++++|...
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~ 167 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXG 167 (244)
T ss_dssp SSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECT
T ss_pred ccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEEC
Confidence 9999999986322 111 3345 57777777776542 23445667778877663 345677766653
Q ss_pred CChhHHHHHHHHHHHHHHhCC---CeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHH
Q 020623 157 ETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQ 233 (323)
Q Consensus 157 ~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~ 233 (323)
++. ..++++..+. ++.+..++.. ...+++.||+ ..+|++++++.+++..... ....+.+.
T Consensus 168 ~~~--------~~~~~~~d~~~~~~i~v~~~~~~-~~~l~~~f~v---~~~Pslvl~~~~g~~~~~~-----~~~~~r~~ 230 (244)
T 3q6o_A 168 GSY--------LAREVALDLSQHKGVAVRRVLNT-EANVVRKFGV---TDFPSCYLLFRNGSVSRVP-----VLMESRSF 230 (244)
T ss_dssp TCC--------HHHHHHHHTTTCTTEEEEEEETT-CHHHHHHHTC---CCSSEEEEEETTSCEEECC-----CSSSSHHH
T ss_pred Ccc--------hHHHHHHHhccCCceEEEEEeCc-hHHHHHHcCC---CCCCeEEEEeCCCCeEeec-----cccccHHH
Confidence 211 3444555544 3777776654 3578899999 4689999999987654432 12346677
Q ss_pred HHHHHHHHH
Q 020623 234 ISRFLEGYR 242 (323)
Q Consensus 234 I~~Fi~~~~ 242 (323)
+..+++.+.
T Consensus 231 ~~~~l~~~~ 239 (244)
T 3q6o_A 231 YTAYLQRLS 239 (244)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHhCC
Confidence 777776553
No 27
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.70 E-value=1.6e-07 Score=82.12 Aligned_cols=124 Identities=17% Similarity=0.277 Sum_probs=96.9
Q ss_pred CCcccccCCCCChHHHHHHHHHhcCCC-------ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHH
Q 020623 2 HGIPTEYYGPRKAELLVRYLKKFVAPD-------VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLA 66 (323)
Q Consensus 2 ~G~~~eY~G~R~a~~Iv~~l~k~~~p~-------v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A 66 (323)
+|....|.|.++++.|.+|+.+...+. +..+ +.++++.++..++ +++|.|... ...+.++|
T Consensus 98 ~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~v~f~a~wC~~C~~~~p~~~~~a 173 (241)
T 3idv_A 98 KGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVL-TKENFDEVVNDAD---IILVEFYAPWCGHCKKLAPEYEKAA 173 (241)
T ss_dssp TTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEEC-CTTTHHHHHHHCS---EEEEEEECTTCTGGGGTHHHHHHHH
T ss_pred CCCcccccCcccHHHHHHHHhhccCcccccccccceec-cHHHHHHhhccCC---eEEEEEECCCCHHHHHhHHHHHHHH
Confidence 577778999999999999999997763 4445 6789999998776 467777542 24788889
Q ss_pred HhhcCc---eeEEeec-ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCe
Q 020623 67 LKYKKK---AWFAVAK-DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLS 131 (323)
Q Consensus 67 ~~~~~~---~~F~~~~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv 131 (323)
.++.+. +.|+.++ +...+++.++++.+.|++++|++ ++...|.|..+.+.|.+||.++.-|.+
T Consensus 174 ~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 174 KELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRK--GRPYDYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp HHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCCSHHHHHHHHHHHTTCTT
T ss_pred HHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEEC--CeEEEecCCCCHHHHHHHHHhhhCCCC
Confidence 888654 6676653 23568899999999999999986 344458899999999999999987753
No 28
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.58 E-value=5e-06 Score=73.54 Aligned_cols=196 Identities=13% Similarity=0.095 Sum_probs=128.4
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEec-CC--h-------hHHHHHHHhh---cCc--eeEEeec-ccchhhHhhcCCC
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFG-LD--E-------SVMSNLALKY---KKK--AWFAVAK-DFSEDTMVLYDFD 92 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~-~~--~-------~~f~~~A~~~---~~~--~~F~~~~-~~~~~~~~~~~~~ 92 (323)
....++.++|+++++.-+. ++.|.|+ .+ . +.+.++|+.+ ++. +.|+..+ +..++++.+|++.
T Consensus 8 ~~~~~~~~ql~~~~~~~~~--pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~ 85 (243)
T 2hls_A 8 DLSEDFRRELRETLAEMVN--PVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVE 85 (243)
T ss_dssp CCCHHHHHHHHHHHTTCCS--CEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCC
T ss_pred hCCHHHHHHHHHHHHhCCC--CEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCC
Confidence 3445567889888876432 4555543 22 1 2567778763 323 7776653 2356788899998
Q ss_pred CCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcC--CCeeecChhhHHHhhcCCCcE-EEEEEeCCChhHHHHHHHHH
Q 020623 93 KVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFL--PLSVPINQDTLNLLKDDKRKI-VLAIVEDETEEKSQKLVTTL 169 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~--Plv~~~t~~~~~~~~~~~~~~-v~~f~~~~~~e~~~~~~~~l 169 (323)
..|+++++ + + ...|.|......+..|+....- ..-..++.++...+.....++ ++.|+.. .=..-+.+...+
T Consensus 86 ~~Pt~~i~-~--g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~-wC~~C~~~~p~l 160 (243)
T 2hls_A 86 RVPTVAFL-G--G-EVRWTGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITP-SCPYCPYAVLLA 160 (243)
T ss_dssp SSSEEEET-T--T-TEEEESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECS-SCSSHHHHHHHH
T ss_pred cCCEEEEE-C--C-ceeEcCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECC-CCCCcHHHHHHH
Confidence 89999998 3 2 4557776666678888765321 112245666766665433444 4556542 112235677788
Q ss_pred HHHHHhC-----CCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 170 KAAASAN-----RELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 170 ~~~A~~~-----~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.++|..+ +++.+..+|+..++.+++.+|+ ...|.+++ +++..+ .+..+.+.|.+|++..+..
T Consensus 161 ~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V---~~vPt~~i---~G~~~~-------~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 161 HMFAYEAWKQGNPVILSEAVEAYENPDIADKYGV---MSVPSIAI---NGYLVF-------VGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTC---CSSSEEEE---TTEEEE-------ESCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHcccccCCcEEEEEEECccCHHHHHHcCC---eeeCeEEE---CCEEEE-------eCCCCHHHHHHHHHHHhhc
Confidence 8888887 4599999999988888888999 57999988 443222 2346789999999998764
No 29
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.48 E-value=1.7e-05 Score=77.94 Aligned_cols=176 Identities=11% Similarity=0.093 Sum_probs=119.0
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC---ceeEEeecc---cchhhHhhcCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK---KAWFAVAKD---FSEDTMVLYDFDK 93 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~---~~~F~~~~~---~~~~~~~~~~~~~ 93 (323)
+|..++ .++++..+.+.+. +++|-|... ...+.++|.++.+ .+.|+.++. ...+++.+|++..
T Consensus 13 ~V~~Lt-~~~f~~~v~~~~k--~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 13 PLTLLD-ADSVRPTVLGSSS--AWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp SSEEEC-TTTHHHHHSSCSS--EEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CcEECC-hHHHHHHHHhCCC--eEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 477785 5788887755433 577877653 2478899999876 577776642 3567889999999
Q ss_pred CCeEEEecCCCC---CCccccCCCCHHHHHHHHHhhc----------CCCeeecChhhHHHhhcC--CCcEEEEEEeCCC
Q 020623 94 VPALVALQPSYN---EHNIFYGPFDEEFLEEFIKQNF----------LPLSVPINQDTLNLLKDD--KRKIVLAIVEDET 158 (323)
Q Consensus 94 ~p~ivv~k~~~~---~~~~y~g~~~~~~L~~fI~~~~----------~Plv~~~t~~~~~~~~~~--~~~~v~~f~~~~~ 158 (323)
.|++++|+++.. ....+.|..+.+.|.+||.+.. .|.+..++.+++..++.. ..+++++|.+.++
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s 169 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS 169 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch
Confidence 999999986322 1234557778888888776542 244677778888777653 3566676655321
Q ss_pred hhHHHHHHHHHHHHHHhCC---CeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceee
Q 020623 159 EEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLT 218 (323)
Q Consensus 159 ~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~ 218 (323)
...++++..+. ++.+..++... ..+++.||+ ..+|.+++++.+++...
T Consensus 170 --------~~~~~~~ldl~~~~~v~v~~v~~~~-~~l~~kfgV---~~~Pslvl~~~nGk~~~ 220 (519)
T 3t58_A 170 --------YLGREVTLDLSQYHAVAVRRVLNTE-SDLVNKFGV---TDFPSCYLLLRNGSVSR 220 (519)
T ss_dssp --------CHHHHHHHHTTTCTTEEEEEEETTC-HHHHHHHTC---CCSSEEEEEETTSCEEE
T ss_pred --------HHHHHHHHHhhccCCeeEEEecCch-HHHHHHcCC---CCCCeEEEEeCCCceee
Confidence 13445555554 37777666542 467899999 46899999999876543
No 30
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.47 E-value=2e-06 Score=75.24 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=87.7
Q ss_pred cccccC----CCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecC-C-------hhHHHHHHHhhcC
Q 020623 4 IPTEYY----GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D-------ESVMSNLALKYKK 71 (323)
Q Consensus 4 ~~~eY~----G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~-~-------~~~f~~~A~~~~~ 71 (323)
.+.+|. |+|++++|++|++.+..|.|.+++ .+.+.++.+.... ..++.|.+ + .+.|+++|+++++
T Consensus 86 ~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t-~~n~~~~~~~~~~--~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~ 162 (227)
T 4f9z_D 86 EQLNLEDEDIESIDATKLSRFIEINSLHMVTEYN-PVTVIGLFNSVIQ--IHLLLIMNKASPEYEENMHRYQKAAKLFQG 162 (227)
T ss_dssp EEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECC-HHHHHHHHHSSCC--EEEEEEECTTSTTHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccCCCCHHHHHHHHHHhCCCceeecC-cccHHHHhccCCc--eEEEEEEcCCcchHHHHHHHHHHHHHHhhC
Confidence 346788 489999999999999999999995 6778887766532 23344422 1 1367899999999
Q ss_pred ceeEEeeccc---chhhHhhcCCC--CCCeEEEecCCCCCCcccc-CCCCHHHHHHHHHhh
Q 020623 72 KAWFAVAKDF---SEDTMVLYDFD--KVPALVALQPSYNEHNIFY-GPFDEEFLEEFIKQN 126 (323)
Q Consensus 72 ~~~F~~~~~~---~~~~~~~~~~~--~~p~ivv~k~~~~~~~~y~-g~~~~~~L~~fI~~~ 126 (323)
.+.|+.++.. ...++..+|+. ..|+++++....+..+.+. ++++.+.|++|++.-
T Consensus 163 ~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 163 KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 9999887532 22456788886 6799999986433334444 789999999999764
No 31
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.19 E-value=2.4e-05 Score=58.99 Aligned_cols=104 Identities=8% Similarity=0.173 Sum_probs=79.9
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
+.+..+|.+++......++++++.|... .-..-..+...+.++++.+++ +.|+.+|.+..+.+++.||+ ...|.+
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~Pt~ 79 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAE-WCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSV---LNIPTT 79 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECC-CCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCc---ccCCEE
Confidence 5678899999998877778887777763 223446777899999999997 99999999988888999999 579999
Q ss_pred EEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 208 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 208 vI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+++...+..... .+..+.+.|.+|++.++
T Consensus 80 ~~~~~g~~~~~~------~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVDSL------VGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEEEE------ESCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEEee------eccCCHHHHHHHHHHHh
Confidence 988433222212 23468899999999875
No 32
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.18 E-value=3.8e-05 Score=58.19 Aligned_cols=104 Identities=13% Similarity=0.249 Sum_probs=79.4
Q ss_pred CeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+..++.+++.... ..++++++.|... .=..-..+...+.++++.+++ +.|+.+|.+..+.+++.||+ ...|.+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~-~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 80 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRK-NCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSL---KGVPQI 80 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECS-SCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSCEE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCC-CChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCC---CcCCEE
Confidence 46778999998877 6678888877763 223346777899999999997 99999999988888999999 579999
Q ss_pred EEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 208 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 208 vI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+++...+..... .+..+.+.|.+|++.++.
T Consensus 81 ~~~~~g~~~~~~------~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYFKDGEYKGKM------AGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEETTEEEEEE------ESSCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEE------eccCCHHHHHHHHHHHhc
Confidence 988543322222 234688999999998764
No 33
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.12 E-value=1.9e-05 Score=63.33 Aligned_cols=117 Identities=11% Similarity=0.082 Sum_probs=87.2
Q ss_pred CCeeecChhhHH-HhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 129 PLSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 129 Plv~~~t~~~~~-~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
+.+..++.+++. .+...++++++.|... .-..-..+...|.++++.+++ +.|+.+|.+..+.+++.||+ ..+|.
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~-wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSP-ACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGV---QGTPT 81 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTC---CEESE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECC-CChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCC---CcCCE
Confidence 568899999998 5666678888877763 223346777899999999998 99999999988888999999 57899
Q ss_pred EEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccccccCCCC
Q 020623 207 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPS 255 (323)
Q Consensus 207 ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~kSeP~ 255 (323)
++++...+..... .+..+.+.|.+||+.++....+...++.|.
T Consensus 82 ~~~~~~G~~~~~~------~G~~~~~~l~~~l~~~l~~~~~~~~~~~~~ 124 (140)
T 3hz4_A 82 FKFFCHGRPVWEQ------VGQIYPSILKNAVRDMLQHGEECIRKSTPV 124 (140)
T ss_dssp EEEEETTEEEEEE------ESSCCHHHHHHHHHHHHHHHHHHHHTSBC-
T ss_pred EEEEeCCcEEEEE------cCCCCHHHHHHHHHHHhcccccCccccccc
Confidence 9988543322222 234678999999999997655555555553
No 34
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.10 E-value=5.2e-05 Score=56.36 Aligned_cols=103 Identities=10% Similarity=0.124 Sum_probs=76.3
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 210 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~ 210 (323)
|.+++.+++......++++++.|... .-..-..+...+.++++.++++.|+.+|.+..+.+++.||+ ...|.++++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAE-WCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGV---MSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSCEEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECC-CChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCc---cccCEEEEE
Confidence 45788899988776677777777653 22334667788999999998899999999887788899999 468999988
Q ss_pred eCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 211 DGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 211 ~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
...+..... .+..+.+.+.+|++.++.
T Consensus 77 ~~g~~~~~~------~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEI------IGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEE------ESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhc------cCCCCHHHHHHHHHHHhc
Confidence 433221111 234678999999998864
No 35
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.10 E-value=4.4e-05 Score=60.82 Aligned_cols=105 Identities=8% Similarity=0.076 Sum_probs=78.9
Q ss_pred CCeeecChhhHHHhhcC------------CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhh
Q 020623 129 PLSVPINQDTLNLLKDD------------KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADT 195 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~------------~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~ 195 (323)
+.+..++.+++...... ++++++.|... .=..-..+...|.++++.+++ +.|+.+|.+....+++.
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYAD-WCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARD 100 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECT-TCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHH
Confidence 45777888888765443 57888777753 112345677889999999997 99999999988888999
Q ss_pred cCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 196 FEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 196 ~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
||+ ...|.+++++.+++.... .+..+.+.|.+||+.++.
T Consensus 101 ~~v---~~~Pt~~~~~~~g~~~~~------~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 101 FGI---QSIPTIWFVPMKGEPQVN------MGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp TTC---CSSSEEEEECSSSCCEEE------ESCCCHHHHHHHHHHTTC
T ss_pred cCC---CCcCEEEEEeCCCCEEEE------eCCCCHHHHHHHHHHHHc
Confidence 999 579999999876643222 234688999999998765
No 36
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.06 E-value=9.7e-05 Score=58.68 Aligned_cols=106 Identities=8% Similarity=0.097 Sum_probs=79.4
Q ss_pred CeeecChhhHHHhhc------------CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhc
Q 020623 130 LSVPINQDTLNLLKD------------DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTF 196 (323)
Q Consensus 130 lv~~~t~~~~~~~~~------------~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~ 196 (323)
.+..++.+++..... .++++++.|... .=..-..+...|.++++++++ +.|+.+|.+....+++.|
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~-wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYAD-WCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECT-TSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECC-cCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHc
Confidence 467788888876543 356777777653 223345677889999999987 999999998877888999
Q ss_pred CCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 197 EANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 197 gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
|+ ...|.+++++.+++.... .+..+.+.|.+||+......
T Consensus 89 ~v---~~~Pt~~~~~~~G~~~~~------~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 89 GI---RSIPSILFIPMEGKPEMA------QGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TC---CSSCEEEEECSSSCCEEE------ESCCCHHHHHHHHHHHHTSC
T ss_pred CC---CCCCEEEEECCCCcEEEE------eCCCCHHHHHHHHHHHhhcc
Confidence 99 579999999876543222 23478899999999987654
No 37
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.05 E-value=0.00011 Score=59.26 Aligned_cols=105 Identities=10% Similarity=0.174 Sum_probs=81.2
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
.+..++.+++......++++++.|... .=..-..+...|.++++++.+ +.|+.+|.+..+.+++.||+ ...|.++
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 114 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAP-WCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRI---RSIPTIM 114 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECS-SCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECC-CCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCC---CccCEEE
Confidence 477888899988777778888878763 223346777899999999976 99999999988888999999 5789999
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++...+..... .+..+.+.|.+||++.+..
T Consensus 115 ~~~~G~~~~~~------~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 115 LYRNGKMIDML------NGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEETTEEEEEE------SSCCCHHHHHHHHHHHHHS
T ss_pred EEECCeEEEEE------eCCCCHHHHHHHHHHHhcc
Confidence 88643322222 2357889999999998875
No 38
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.02 E-value=7.4e-05 Score=55.98 Aligned_cols=101 Identities=9% Similarity=0.122 Sum_probs=76.6
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
.+.+++.+++.... .++++++.|.... =..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~-C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATA-CGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEV---MSIPTLI 78 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSB-CHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSBSEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCC-CHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCC---cccCEEE
Confidence 46788999998877 6678877777532 23446777899999999998 99999999988888999999 5799999
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
+++..+..... .+..+.+.|.+|++++
T Consensus 79 ~~~~G~~~~~~------~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFKDGQPVDKV------VGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEETTEEEEEE------ESCCCHHHHHHHHHTT
T ss_pred EEeCCeEEEEE------eCCCCHHHHHHHHHHh
Confidence 88743322222 2346789999998764
No 39
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.02 E-value=4.9e-05 Score=57.13 Aligned_cols=102 Identities=6% Similarity=0.118 Sum_probs=76.0
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+++.+++......++++++.|... .-..-..+...|.++++++++ +.|+.+|.+....+++.||+ ...|.+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 78 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAE-WCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRV---MSIPTVIL 78 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECT-TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECC-CCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCC---CcCCEEEE
Confidence 56788999987777677887777653 223345677889999999986 99999999887888899999 57899998
Q ss_pred EeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 210 WDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 210 ~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+...+ .+.+ .+..+.+.|.+|++..+.
T Consensus 79 ~~~g~~~~~~-------~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 FKDGQPVEVL-------VGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EETTEEEEEE-------ESCCCHHHHHHHHHTTC-
T ss_pred EeCCcEeeeE-------eCCCCHHHHHHHHHHHhh
Confidence 84332 2222 234678999999987764
No 40
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.02 E-value=0.00014 Score=54.83 Aligned_cols=102 Identities=14% Similarity=0.205 Sum_probs=75.4
Q ss_pred CeeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+.+++.+++.. +...++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.+
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 78 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAE-WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTL 78 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTC---CSSSEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECC-CCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---cccCEE
Confidence 467889999985 445667777777653 223345677889999999986 99999999887788899999 578999
Q ss_pred EEEeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 208 VVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 208 vI~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+++. +++. ... .+..+.+.|.+|++..+
T Consensus 79 ~~~~-~G~~~~~~------~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFK-NGEVAATK------VGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEE-TTEEEEEE------ESCCCHHHHHHHHHHHH
T ss_pred EEEe-CCEEEEEE------ecCCCHHHHHHHHHHhh
Confidence 9884 4422 111 23467899999999875
No 41
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.01 E-value=0.00017 Score=54.81 Aligned_cols=105 Identities=10% Similarity=0.122 Sum_probs=78.2
Q ss_pred CCeeecChhhHHHh-hcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 129 PLSVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 129 Plv~~~t~~~~~~~-~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
.-+..++.+++... ...++++++.|.... =..-..+...|.++++.+++ +.|+.+|.+..+.+++.||+ ...|.
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASW-CGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKV---EGVPA 82 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTT-CTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTC---CSSSE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCC-CHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCC---CceeE
Confidence 34888999999865 456678877777632 12346677889999999987 99999999987888899999 57899
Q ss_pred EEEEeCCccee-eccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 207 MVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 207 ivI~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++++ .+++.. .. .+..+.+.+.+|++.++.+
T Consensus 83 ~~~~-~~G~~~~~~------~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 83 LRLV-KGEQILDST------EGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEE-ETTEEEEEE------ESCCCHHHHHHHHHHHHC-
T ss_pred EEEE-cCCEEEEEe------cCCCCHHHHHHHHHHHhcC
Confidence 9988 444321 11 2346789999999998764
No 42
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.00 E-value=5.6e-05 Score=57.83 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=68.3
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
|..|+|.+++++.+.+.+.. +++|-|... .+.+.++|..+. ++.|..++ +..++++.+|++.+.|++++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k-~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNK-LVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred eEEeCCHHHHHHHHHhcCCC-EEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEE
Confidence 46788999999988764321 577777653 247888998876 45565543 34678999999999999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
|+++ .....+.|. +.+.|.+||.+|.
T Consensus 80 ~~~G-~~v~~~~G~-~~~~l~~~i~k~K 105 (105)
T 3zzx_A 80 MKNG-QKLDSLSGA-NYDKLLELVEKNK 105 (105)
T ss_dssp EETT-EEEEEEESC-CHHHHHHHHHHHC
T ss_pred EECC-EEEEEEeCc-CHHHHHHHHHhcC
Confidence 9853 222235574 7899999999874
No 43
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.00 E-value=9.7e-05 Score=60.42 Aligned_cols=105 Identities=11% Similarity=0.194 Sum_probs=78.1
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+++..++......++++++.|... .=..-..+...|.++|+++++ +.|+.+|.+..+.+.+.||+ ...|.+++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~-wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i---~~~Pt~~~ 124 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAP-WCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRI---QGIPAFIL 124 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTC---CSSSEEEE
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECC-CCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCC---CcCCEEEE
Confidence 67888888888766678888877753 222345677889999999986 99999999988888899999 57999998
Q ss_pred EeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 210 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 210 ~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
+...+..... .+..+.+.|.+|++.++..+
T Consensus 125 ~~~G~~~~~~------~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 125 FHKGRELARA------AGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EETTEEEEEE------ESCCCHHHHHHHHHHHHC--
T ss_pred EeCCeEEEEe------cCCCCHHHHHHHHHHHhccC
Confidence 8533222112 23467899999999988653
No 44
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.99 E-value=7.1e-05 Score=56.14 Aligned_cols=101 Identities=8% Similarity=0.152 Sum_probs=74.9
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+++.+++......++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~-~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 77 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAA-WCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGI---MSIPTLIL 77 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECT-TCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCC---ccccEEEE
Confidence 56788899988777778888877763 223345677889999999987 99999999887788899999 57899998
Q ss_pred EeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 210 WDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 210 ~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+...+ .+.. .+..+.+.+.+|++.++
T Consensus 78 ~~~G~~~~~~-------~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 78 FKGGRPVKQL-------IGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EETTEEEEEE-------ESCCCHHHHHHHTTTTT
T ss_pred EeCCeEEEEE-------ecCCCHHHHHHHHHHHh
Confidence 84332 2222 12356788988887654
No 45
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.96 E-value=0.00011 Score=58.61 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=65.9
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
+.+.+++.+++......+.++++.|... .-..-..+...|.++++++++ +.|+.+|.+....+++.||+ ..+|.+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~-~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAP-WCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGV---RSVPTL 108 (140)
T ss_dssp ----------------CCCEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECC-CCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCC---CccCEE
Confidence 5567788888887654433466666553 223346777889999999986 99999999988888899999 579999
Q ss_pred EEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 208 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 208 vI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
+++...+..... .+..+.+.|.+||+.+++|+
T Consensus 109 ~~~~~G~~~~~~------~G~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 109 VLFRRGAPVATW------VGASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp EEEETTEEEEEE------ESCCCHHHHHHHHHHHHTCC
T ss_pred EEEeCCcEEEEE------eCCCCHHHHHHHHHHHHccC
Confidence 988533221111 23467899999999998874
No 46
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.96 E-value=0.00012 Score=56.45 Aligned_cols=103 Identities=9% Similarity=0.136 Sum_probs=75.7
Q ss_pred CCCeeecChhhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 128 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
-+.....+.+++..+.. .++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ ..+|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 86 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSAT-WCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEV---KSMP 86 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECT-TCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---cccc
Confidence 34566677788887766 677888777763 12334677789999999998899999999988888999999 5799
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.++++...+..... .+. +.+.|.+||+++
T Consensus 87 t~~~~~~G~~~~~~------~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQKVGEF------SGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSSEEEEE------ESC-CHHHHHHHHHHH
T ss_pred EEEEEeCCeEEEEE------cCC-CHHHHHHHHHHh
Confidence 99888433221111 223 789999999876
No 47
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.96 E-value=0.00015 Score=54.09 Aligned_cols=102 Identities=8% Similarity=0.151 Sum_probs=74.1
Q ss_pred eeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 131 SVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 131 v~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
|..++.+++.... ..++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|.++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAP-WCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNI---RSIPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECC-CChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCC---CcccEEE
Confidence 4678888888754 4567887777753 223346677889999999987 99999999887888899999 5789998
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+....+..... .+..+.+.+.+|+++++
T Consensus 78 ~~~~g~~~~~~------~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESI------IGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEE------EECCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEE------ecCCCHHHHHHHHHhhC
Confidence 87533222111 23467889999998763
No 48
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.94 E-value=0.00021 Score=55.24 Aligned_cols=104 Identities=14% Similarity=0.139 Sum_probs=77.0
Q ss_pred CCCeeecChhhHHHh-hcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 128 LPLSVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~-~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
-+.+..++.+++... ...++++++.|... .=..-..+...|.++++++.+ +.|+.+|.+....+++.||+ ...|
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~-~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 87 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHAQ-WCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEV---SAVP 87 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC---Cccc
Confidence 356888888898864 45667887777753 223345677888999999976 99999999887788899999 5789
Q ss_pred eEEEEeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 206 KMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 206 ~ivI~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.++++. +++. ... .+..+.+.|.+|++.++
T Consensus 88 t~~~~~-~G~~~~~~------~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMK-NGDVVDKF------VGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEE-TTEEEEEE------ESCCCHHHHHHHHHHHH
T ss_pred EEEEEe-CCcEEEEE------cCCCCHHHHHHHHHHHh
Confidence 999884 4422 111 23457899999999875
No 49
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.94 E-value=0.00018 Score=54.03 Aligned_cols=100 Identities=11% Similarity=0.176 Sum_probs=74.4
Q ss_pred eeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 131 SVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 131 v~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
+..++.+++.... ..++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAP-WCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGI---RSIPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTC---CSSCEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECC-CCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCC---CcCCEEE
Confidence 5678888988754 5567888777753 223345677889999999987 99999999887788899999 5789988
Q ss_pred EEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 209 VWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 209 I~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+.. +++ +.. .+..+.+.+.+|+++++
T Consensus 79 ~~~-~G~~~~~~-------~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFK-GGKKCETI-------IGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EES-SSSEEEEE-------ESCCCHHHHHHHHHHHC
T ss_pred EEe-CCEEEEEE-------eCCCCHHHHHHHHHHHh
Confidence 874 432 222 23467889999999875
No 50
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.93 E-value=0.0002 Score=53.32 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=71.7
Q ss_pred eecCh-hhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 132 VPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 132 ~~~t~-~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
.+++. +++..... .++++++.|... .-..-..+...+.+++++++++.|+.+|.+..+.+++.+|+ ...|.++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQ-WCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSV---TAMPTFV 77 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECC-CCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCC---ccccEEE
Confidence 34555 77777665 567887777753 22334567788999999998899999999888888899999 5789998
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+.+..+..... .+ .+.+.|.+|+++++
T Consensus 78 ~~~~g~~~~~~------~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 78 FIKDGKEVDRF------SG-ANETKLRETITRHK 104 (104)
T ss_dssp EEETTEEEEEE------ES-SCHHHHHHHHHHHC
T ss_pred EEeCCcEEEEE------eC-CCHHHHHHHHHhhC
Confidence 88643322111 12 57789999998763
No 51
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.93 E-value=0.0001 Score=57.70 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=77.2
Q ss_pred CeeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+..++.+++.. +...++++++.|.... =..-..+...+.++++++++ +.|+.+|.+....+++.|++ ..+|.+
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~ 93 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAPW-CGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGV---QGFPTI 93 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECTT-CSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTC---CSSSEE
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECCC-CHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCC---CccCEE
Confidence 577889899987 4456678877777531 11224456678899999988 99999999988888899999 579999
Q ss_pred EEEeCCcc-eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 208 VVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 208 vI~~~~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
++++.+++ .... .+..+.+.|.+|+.+.+.
T Consensus 94 ~~~~~~~~~~~~~------~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKNKPEDY------QGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTTSCEEC------CSCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEe------ecCCCHHHHHHHHHHHHh
Confidence 99987653 2222 235688999999988764
No 52
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.91 E-value=8.6e-05 Score=57.45 Aligned_cols=109 Identities=11% Similarity=0.121 Sum_probs=79.0
Q ss_pred CeeecChhhHH-HhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~-~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+..++.+++. .+...++++++.|... .=..-..+...+.++++.+++ +.|+.+|.+..+.++..||+ ...|.+
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~-~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 79 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAP-WCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSV 79 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCC---CccceE
Confidence 37788999995 4666677888777763 223346677889999999986 99999999988888899999 579999
Q ss_pred EEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 208 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 208 vI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++++.+++-....|.. -+..+.+.|.+|++..++.
T Consensus 80 ~~~~~~~~~~~~~g~~--~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQ--INSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEGGGTEEEEEE--ECCSCHHHHHHHHHHHHHC
T ss_pred EEEeCCCccceeeccc--cCcCCHHHHHHHHHHHHHh
Confidence 9987644211111100 0125889999999998863
No 53
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.91 E-value=0.00015 Score=54.29 Aligned_cols=101 Identities=7% Similarity=0.109 Sum_probs=74.3
Q ss_pred CeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+..++.+++.... ..++++++.|... .-..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.+
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 78 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAE-WCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQV---RSIPTL 78 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECT-TCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTC---CSSSEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECC-CChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCC---CccCEE
Confidence 46788999998654 5667887777753 223346677888999999986 99999999887788899999 579999
Q ss_pred EEEeCCcc-eeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 208 VVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 208 vI~~~~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
+++ .+++ .... .+..+.+.|.+|++.+
T Consensus 79 ~~~-~~G~~~~~~------~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLV-RDGKVIDKK------VGALPKSQLKAWVESA 106 (107)
T ss_dssp EEE-ETTEEEEEE------ESCCCHHHHHHHHHHT
T ss_pred EEE-eCCEEEEEe------cCCCCHHHHHHHHHhc
Confidence 988 4442 2212 2346788999999864
No 54
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=8.8e-05 Score=58.16 Aligned_cols=109 Identities=13% Similarity=0.109 Sum_probs=79.0
Q ss_pred CCeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC----C-eEEEEEcCcchhhHhhhcCCcCCC
Q 020623 129 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----E-LVFCYVGIKQFADFADTFEANKKS 202 (323)
Q Consensus 129 Plv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~----~-l~F~~vd~~~~~~~~~~~gl~~~~ 202 (323)
..+..++.+++.... ..++++++.|... .=..-..+...+.+++++++ + +.|+.+|.+....+++.|++ .
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~ 82 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAP-WCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI---R 82 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECT-TCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC---C
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECC-CCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC---C
Confidence 357889999998754 5567777777653 11233456677788888775 5 99999999887788889999 5
Q ss_pred CCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 203 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
..|.+++++..+..... .+..+.+.|.+|+++.+.....
T Consensus 83 ~~Pt~~~~~~g~~~~~~------~G~~~~~~l~~~l~~~~~~~~~ 121 (133)
T 1x5d_A 83 GFPTIKIFQKGESPVDY------DGGRTRSDIVSRALDLFSDNAP 121 (133)
T ss_dssp SSSEEEEEETTEEEEEE------CSCCSHHHHHHHHHHHHHHHSC
T ss_pred eeCeEEEEeCCCceEEe------cCCCCHHHHHHHHHHHhhccCC
Confidence 79999999874322222 2346889999999999876543
No 55
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.90 E-value=6e-05 Score=66.73 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=83.6
Q ss_pred ccccc-CCCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEec--CC---h-------hHHHHHHHhhc
Q 020623 4 IPTEY-YGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG--LD---E-------SVMSNLALKYK 70 (323)
Q Consensus 4 ~~~eY-~G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~--~~---~-------~~f~~~A~~~~ 70 (323)
.+..| .|.++.++|.+|++...-|.|.+++. +.+..+ ...+ ++|.|. +. . ..+.++|++++
T Consensus 90 ~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~ 163 (252)
T 2h8l_A 90 KTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGKD----LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFL 163 (252)
T ss_dssp SEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSSS----EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCCC----eEEEEeecchhhcchhHHHHHHHHHHHHHHcc
Confidence 45689 99999999999999999999999965 556665 3333 344442 21 1 24567899998
Q ss_pred Cc---eeEEeeccc-chhhHhhcCC--C--CCCeEEEecCCCCCCccccCCCCHHH--HHHHHHhhcC
Q 020623 71 KK---AWFAVAKDF-SEDTMVLYDF--D--KVPALVALQPSYNEHNIFYGPFDEEF--LEEFIKQNFL 128 (323)
Q Consensus 71 ~~---~~F~~~~~~-~~~~~~~~~~--~--~~p~ivv~k~~~~~~~~y~g~~~~~~--L~~fI~~~~~ 128 (323)
+. +.|+.++.. -..++..+|+ + ..|+++++.. .+..+.+.++++.+. |.+|+++-.-
T Consensus 164 ~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 164 DAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp HTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHHHH
T ss_pred ccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHHHC
Confidence 76 888887432 2346667788 2 4799999864 344555667888887 9999987653
No 56
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.89 E-value=9.4e-05 Score=56.97 Aligned_cols=109 Identities=7% Similarity=0.164 Sum_probs=76.7
Q ss_pred hhcCCCeeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCC
Q 020623 125 QNFLPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKS 202 (323)
Q Consensus 125 ~~~~Plv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~ 202 (323)
......+..++.+++.. +...++++++.|... .=..-..+...|.++++++++ +.|+.+|.+..+.+++.||+ .
T Consensus 8 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~ 83 (121)
T 2i1u_A 8 DSEKSATIKVTDASFATDVLSSNKPVLVDFWAT-WCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQV---V 83 (121)
T ss_dssp ----CCSEECCTTTHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---C
T ss_pred hhhcccceecCHHHHHHHHHhCCCcEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCC---C
Confidence 33445678899999875 445677888777763 223346777889999999986 99999999887888899999 5
Q ss_pred CCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 203 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
..|.+++....+..... .+..+.+.|.+|++.++.
T Consensus 84 ~~Pt~~~~~~g~~~~~~------~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 84 SIPTLILFKDGQPVKRI------VGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SSSEEEEEETTEEEEEE------ESCCCHHHHHHHTCSCCC
T ss_pred cCCEEEEEECCEEEEEe------cCCCCHHHHHHHHHHHHh
Confidence 78999888633221111 234678889998876654
No 57
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.89 E-value=0.00017 Score=56.65 Aligned_cols=103 Identities=9% Similarity=0.061 Sum_probs=76.3
Q ss_pred eeecCh-hhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEE
Q 020623 131 SVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 131 v~~~t~-~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+++. +++......++++++.|... .=..-..+...|.+++++++++.|+.+|.+....+++.||+ ..+|.+++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~-wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAV-WCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRV---LQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECT-TCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECC-cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 778887 88888777778888877763 22334567778999999997799999999988888899999 57999888
Q ss_pred EeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 210 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 210 ~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.......... .+ .+.+.|.+||+.++..
T Consensus 97 ~~~G~~~~~~------~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 97 ARSGKMLGHV------IG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EETTEEEEEE------ES-SCHHHHHHHHHHHHHC
T ss_pred EeCCeEEEEE------eC-CCHHHHHHHHHHHhcC
Confidence 7433221111 12 5678999999988753
No 58
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.85 E-value=0.00034 Score=53.00 Aligned_cols=103 Identities=14% Similarity=0.222 Sum_probs=75.9
Q ss_pred CeeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 130 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 130 lv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
.+..++.+++.. +...++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.+
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAA-WCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGV---MSIPTL 81 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECC-CCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCC---CcccEE
Confidence 467889888865 445667888777763 223345677889999999976 99999999887788899999 578999
Q ss_pred EEEeCCcc-eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 208 VVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 208 vI~~~~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
++....+. +.. .+..+.+.+.+|++.+++
T Consensus 82 ~~~~~G~~~~~~-------~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTI-------VGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEE-------ESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEE-------eCCCCHHHHHHHHHHHhh
Confidence 88753322 222 234678899999998865
No 59
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.84 E-value=0.00029 Score=55.07 Aligned_cols=102 Identities=10% Similarity=0.140 Sum_probs=76.0
Q ss_pred CCeeecChhhHHHhhc-CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhC-----CC-eEEEEEcCcchhhHhhhcCCcCC
Q 020623 129 PLSVPINQDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASAN-----RE-LVFCYVGIKQFADFADTFEANKK 201 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~-~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~-----~~-l~F~~vd~~~~~~~~~~~gl~~~ 201 (323)
+.+..++.+++..... .++++++.|... -=..-+.+...+.++|+.+ .+ +.|+.+|.+..+.+++.|++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~-wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v--- 90 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYVP-WSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV--- 90 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEECT-TCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC---
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEECC-ccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC---
Confidence 4588899999998764 467777777653 1123456777888888753 24 99999999988889999999
Q ss_pred CCCCeEEEEeCCcc---eeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 202 SKLPKMVVWDGNEN---YLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 202 ~~~P~ivI~~~~~k---Y~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
...|.++++...++ +.+ .+..+.+.|.+||++.
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~-------~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEY-------SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CSSSEEEEECSSCSSSCEEC-------CSCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEe-------cCCccHHHHHHHHHhc
Confidence 57999999886542 232 3457899999999864
No 60
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.84 E-value=0.00033 Score=54.00 Aligned_cols=106 Identities=8% Similarity=0.107 Sum_probs=76.5
Q ss_pred cCCCeeecChhhHHHhhc----CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCC
Q 020623 127 FLPLSVPINQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKS 202 (323)
Q Consensus 127 ~~Plv~~~t~~~~~~~~~----~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~ 202 (323)
..|.+...+.+++..... .++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~ 86 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTAS-WCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSV---E 86 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---C
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCC---C
Confidence 346677778888876543 467887777753 22334567778999999998899999999988888899999 5
Q ss_pred CCCeEEEEeCCcc-eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 203 KLPKMVVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 203 ~~P~ivI~~~~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
..|.+++....+. +.+ . +.. .+.|.+|++.++.+
T Consensus 87 ~~Pt~~~~~~G~~~~~~-~------G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 87 AMPTFLFMKEGDVKDRV-V------GAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp SSSEEEEEETTEEEEEE-E------SSC-HHHHHHHHHHHHSC
T ss_pred cccEEEEEeCCEEEEEE-e------CcC-HHHHHHHHHHHhcc
Confidence 7899887743322 222 1 234 88999999998764
No 61
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.84 E-value=0.00023 Score=55.66 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=71.1
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhc-----CceeEEeecc-cchhhHhhcCC
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYK-----KKAWFAVAKD-FSEDTMVLYDF 91 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~-----~~~~F~~~~~-~~~~~~~~~~~ 91 (323)
...|..| +.+++++++.+.+. +++|-|... ...|.++|..+. ..+.|+.++. ...+++.++++
T Consensus 14 ~~~v~~l-~~~~f~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v 90 (127)
T 3h79_A 14 PSRVVEL-TDETFDSIVMDPEK--DVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV 90 (127)
T ss_dssp CCCCEEC-CTTTHHHHHTCTTC--EEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC
T ss_pred CCceEEC-ChhhHHHHHhCCCC--CEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC
Confidence 3457778 46889888864332 577777543 247888887653 3467766642 35678899999
Q ss_pred CCCCeEEEecCCCCC-CccccCCCCHHHHHHHHHhhc
Q 020623 92 DKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 92 ~~~p~ivv~k~~~~~-~~~y~g~~~~~~L~~fI~~~~ 127 (323)
...|++++|+++... ...|.|..+.+.|.+||.+++
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQNT 127 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHHC
T ss_pred ccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhcC
Confidence 999999999874332 256889999999999998764
No 62
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.83 E-value=0.00028 Score=52.68 Aligned_cols=100 Identities=9% Similarity=0.156 Sum_probs=72.5
Q ss_pred eec-ChhhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 132 VPI-NQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 132 ~~~-t~~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
.++ +.+++..... .++++++.|... .-..-..+...+.+++++++++.|+.+|.+..+.+.+.||+ ...|.++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~ 78 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSAT-WCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEV---KSMPTFQ 78 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECT-TCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTC---CBSSEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECC-CChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCC---CcCcEEE
Confidence 344 4566766655 567888777763 22344677789999999998899999999988888999999 5799999
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
++...+..... .+. +.+.|.+|+++++
T Consensus 79 ~~~~g~~~~~~------~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 79 FFKKGQKVGEF------SGA-NKEKLEATINELV 105 (105)
T ss_dssp EEETTEEEEEE------ESS-CHHHHHHHHHHHC
T ss_pred EEECCeEEEEE------eCC-CHHHHHHHHHHhC
Confidence 98544322222 123 7899999998763
No 63
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.83 E-value=0.00034 Score=53.18 Aligned_cols=99 Identities=10% Similarity=0.199 Sum_probs=73.4
Q ss_pred eecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEe
Q 020623 132 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 211 (323)
Q Consensus 132 ~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~ 211 (323)
...+.+++......++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ ..+|.+++++
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~ 85 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYAT-WCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEV---SAMPTLLLFK 85 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEEE
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECC-cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CccCEEEEEE
Confidence 3455677887777778888777763 22334677789999999998899999999988888999999 5789999988
Q ss_pred CCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 212 GNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 212 ~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
..+......| .+.+.|.+||+.+
T Consensus 86 ~G~~~~~~~G-------~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 86 NGKEVAKVVG-------ANPAAIKQAIAAN 108 (109)
T ss_dssp TTEEEEEEES-------SCHHHHHHHHHHH
T ss_pred CCEEEEEEeC-------CCHHHHHHHHHhh
Confidence 3322222222 3678999999875
No 64
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.83 E-value=0.00026 Score=56.12 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=71.2
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC-------hhHHHHHHHhhcCceeEEeecc-cchhhHhhcCCCC--CC
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-------ESVMSNLALKYKKKAWFAVAKD-FSEDTMVLYDFDK--VP 95 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~-------~~~f~~~A~~~~~~~~F~~~~~-~~~~~~~~~~~~~--~p 95 (323)
.|.|..+ +.+.++++++... +++|-|... .+.|.++|++|++++.|+.++. -.++++..||+.. .|
T Consensus 5 ~plv~~~-t~~~f~~~~~~~~---pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iP 80 (133)
T 2djk_A 5 SPLIGEI-GPETYSDYMSAGI---PLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFP 80 (133)
T ss_dssp CCCSEEC-CHHHHHHHHHTTS---CEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSS
T ss_pred cCceecc-ChHHHHHHhcCCC---CEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCC
Confidence 4567778 5688888775443 577777542 2478899999998898988742 2456788899987 89
Q ss_pred eEEEecCCCCCCcccc--CCCCHHHHHHHHHhhc
Q 020623 96 ALVALQPSYNEHNIFY--GPFDEEFLEEFIKQNF 127 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~--g~~~~~~L~~fI~~~~ 127 (323)
++++++...+....+. |.++.+.|.+||.+..
T Consensus 81 tl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 81 AFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp EEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHH
T ss_pred EEEEEecCcCcccCCCCccccCHHHHHHHHHHHH
Confidence 9999986223334443 8899999999998654
No 65
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.83 E-value=0.00023 Score=56.01 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=74.7
Q ss_pred eeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 131 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 131 v~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
+..++.+++.. +...++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.++
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFWAE-WCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEECS-SCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTC---CSSSEEE
T ss_pred cEecChhhHHHHHHhcCCEEEEEEECC-CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CccCEEE
Confidence 67788889885 445667777777653 122345667788999999986 99999999877778888999 5789999
Q ss_pred EEeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 209 VWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 209 I~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
++ .+++. ... .+..+.+.|.+|++.+++
T Consensus 100 ~~-~~G~~~~~~------~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 100 LF-KNGEVAATK------VGALSKGQLKEFLDANLA 128 (128)
T ss_dssp EE-ETTEEEEEE------ESCCCHHHHHHHHHHHHC
T ss_pred EE-eCCEEEEEE------cCCCCHHHHHHHHHHhhC
Confidence 88 44432 111 234678999999998763
No 66
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.83 E-value=0.00019 Score=54.73 Aligned_cols=103 Identities=10% Similarity=0.257 Sum_probs=75.1
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
+....++.+++......++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ ...|.++
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~-~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt~~ 84 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAE-WCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENI---TSMPTFK 84 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTC---CSSSEEE
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECC-CCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCC---CcccEEE
Confidence 3456777888888777677877777653 22334667788999999998899999999887788889999 5789988
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+....+..... .+. +.+.|.+|++.++
T Consensus 85 ~~~~G~~~~~~------~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 85 VYKNGSSVDTL------LGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEETTEEEEEE------ESC-CHHHHHHHHHTTC
T ss_pred EEECCcEEEEE------eCC-CHHHHHHHHHHhh
Confidence 87633221111 233 7889999998654
No 67
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.82 E-value=0.00053 Score=51.96 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=74.7
Q ss_pred CCCeeecChhhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCc-chhhHhhhcCCcCCCCC
Q 020623 128 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKL 204 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~-~~~~~~~~~gl~~~~~~ 204 (323)
...+..++.+++..... .++++++.|... .=..-..+...|.+++++++++.|+.+|.+ ....+++.||+ ...
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v---~~~ 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQ-WCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVV 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SBS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECC-cCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCC---Cee
Confidence 34678899999988765 367887777763 223345677889999999989999999997 56778889999 578
Q ss_pred CeEEEEeCCccee-eccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 205 PKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 205 P~ivI~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
|.+++. .+++.. ...| .+.+.|.+||+.+++
T Consensus 80 Pt~~~~-~~G~~~~~~~G-------~~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 80 PTFKIL-KENSVVGEVTG-------AKYDKLLEAIQAARS 111 (111)
T ss_dssp SEEEEE-SSSSEEEEEES-------SCHHHHHHHHHHHHC
T ss_pred eEEEEE-eCCcEEEEEcC-------CCHHHHHHHHHHhhC
Confidence 996655 444321 1112 247899999998763
No 68
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.80 E-value=0.00032 Score=60.72 Aligned_cols=110 Identities=14% Similarity=0.200 Sum_probs=84.5
Q ss_pred CCeeecChhhHHH-hhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 129 PLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 129 Plv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
+.+..+|.+++.. +...++++++.|... .=..-..+...|.++++++++ +.|+.+|.+..+.+++.||+ ..+|.
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~-wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt 87 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAE-WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPT 87 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTC---CSBSE
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECC-cCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCC---CcCCE
Confidence 4678899999987 566678888877763 123346777899999999998 99999999988888899999 57999
Q ss_pred EEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 207 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 207 ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
+++++..+..... .+..+.+.|.+|++..+++...+
T Consensus 88 ~~~~~~G~~~~~~------~G~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 88 LLLFKNGEVAATK------VGALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp EEEEETTEEEEEE------ESCCCHHHHHHHHHHHSCCSCCB
T ss_pred EEEEECCeEEEEe------ccccChHHHHHHHHhhccccccc
Confidence 9988743322121 23468899999999999887655
No 69
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.80 E-value=0.00035 Score=52.12 Aligned_cols=100 Identities=11% Similarity=0.166 Sum_probs=71.3
Q ss_pred eeecCh-hhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 131 SVPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 131 v~~~t~-~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
+.+++. +++..... .++++++.|... .-..-..+...++++++++++ +.|+.+|.+..+.+++.+|+ ...|.
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFAT-WCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNI---SSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECC-cCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCC---CcccE
Confidence 456676 77777665 567777777763 223346677889999999965 99999999988888899999 57899
Q ss_pred EEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 207 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 207 ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
+++....+..... .+ .+.+.|.+|++++
T Consensus 78 ~~~~~~G~~~~~~------~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVKVEEF------AG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEEEEEE------ES-CCHHHHHHHHHHT
T ss_pred EEEEcCCcEEEEE------cC-CCHHHHHHHHHHh
Confidence 8887533222111 12 5678899998864
No 70
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.79 E-value=0.00019 Score=56.81 Aligned_cols=108 Identities=11% Similarity=0.149 Sum_probs=78.2
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC----eEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~----l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
.+..++.+++......++++++.|... .=..-..+...|.++++++++ +.|+.+|.+....+++.||+ ..+|
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~P 93 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYAP-WCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV---SGYP 93 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECCT-TCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC---CSSS
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEECC-CCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC---CccC
Confidence 577889999988877777777766652 112234555677777777542 99999999887888899999 5799
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
.++++. +++.... .+..+.+.|.+|++..+.....+
T Consensus 94 t~~~~~-~G~~~~~------~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILK-KGQAVDY------DGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEE-TTEEEEC------CSCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEE-CCcEEEc------CCCCCHHHHHHHHHHhcCCCCCC
Confidence 999885 3432222 34578899999999998765544
No 71
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.77 E-value=0.00042 Score=52.42 Aligned_cols=101 Identities=9% Similarity=0.135 Sum_probs=72.5
Q ss_pred eeec-ChhhHHHhhcC----CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 131 SVPI-NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 131 v~~~-t~~~~~~~~~~----~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
+..+ +.+++...... ++++++.|... .=..-..+...|.++++++++ +.|+.+|.+....+++.||+ ...
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~ 79 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTAT-WCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGI---TAM 79 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTC---CBS
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECC-CCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCC---Ccc
Confidence 4555 45777766543 67887777763 223345677889999999995 99999999888888899999 578
Q ss_pred CeEEEEeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 205 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 205 P~ivI~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
|.+++....+ .+.+ .+. +.+.|.+|++.+++
T Consensus 80 Pt~~~~~~G~~~~~~-------~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 PTFHVYKDGVKADDL-------VGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SEEEEEETTEEEEEE-------ESC-CHHHHHHHHHHHHC
T ss_pred cEEEEEECCeEEEEE-------cCC-CHHHHHHHHHHHhc
Confidence 9988775322 2222 123 78899999998875
No 72
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.76 E-value=0.00035 Score=54.38 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=74.4
Q ss_pred eeecChhhHH-----HhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEc--CcchhhHhhhcCCcCCC
Q 020623 131 SVPINQDTLN-----LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVG--IKQFADFADTFEANKKS 202 (323)
Q Consensus 131 v~~~t~~~~~-----~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd--~~~~~~~~~~~gl~~~~ 202 (323)
+..++..++. .....++++++.|... .=..-..+...|.++++++++ +.|+.+| .+....+++.||+ .
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~-wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v---~ 81 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTD-TCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDA---N 81 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECS-SCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTC---C
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECC-CCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCC---c
Confidence 4455555555 3334567887777653 122345677788999999965 9999999 8777778889999 5
Q ss_pred CCCeEEEEeCCcceee-ccCCCCCCCCCCHHHHHHHHHHHHcCcc
Q 020623 203 KLPKMVVWDGNENYLT-VIGSESIDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~-~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
..|.+++++.+++... . .+..+.+.|.+|++..+...-
T Consensus 82 ~~Pt~~~~~~~G~~~~~~------~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 82 IVPTTVFLDKEGNKFYVH------QGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp SSSEEEEECTTCCEEEEE------ESCCCHHHHHHHHHHHCCCCC
T ss_pred ceeEEEEECCCCCEEEEe------cCCCCHHHHHHHHHHHhcccc
Confidence 7999999997654221 1 234678999999998865443
No 73
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.74 E-value=0.00059 Score=51.32 Aligned_cols=100 Identities=7% Similarity=0.127 Sum_probs=74.6
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC----CeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~----~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
.+..+|.+++..... ++++++.|... .=..-..+...+.++++.+. ++.|+.+|.+....+++.||+ ...|
T Consensus 6 ~v~~l~~~~~~~~~~-~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIA-EGITFIKFYAP-WCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV---RGYP 80 (111)
T ss_dssp CSEECCTTTHHHHHH-SSEEEEEEECS-SCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cceEcChhhHHHHhc-CCcEEEEEECC-CChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC---Cccc
Confidence 577889999998776 56777767653 22334677788999999875 499999999988888999999 5799
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
.++++...+..... .+..+.+.|.+|+++
T Consensus 81 t~~~~~~g~~~~~~------~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 81 TLLLFRGGKKVSEH------SGGRDLDSLHRFVLS 109 (111)
T ss_dssp EEEEEETTEEEEEE------CSCCSHHHHHHHHHH
T ss_pred EEEEEeCCcEEEec------cCCcCHHHHHHHHHh
Confidence 99888544322222 234788999999976
No 74
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.71 E-value=0.00014 Score=54.88 Aligned_cols=98 Identities=7% Similarity=0.121 Sum_probs=61.5
Q ss_pred ChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCc
Q 020623 135 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE 214 (323)
Q Consensus 135 t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~ 214 (323)
|.+++......++++++.|...- =..-..+...+.+++++++++.|+.+|.+..+.+++.||+ ...|.++++...+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTEN-CGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAV---FTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESS-CHHHHHHHHHHHHHHHTCTTEEEEEEEECCC------------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCC-CcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCC---CCCCEEEEEeCCe
Confidence 34566666666778877777632 2334667789999999997799999999988888899999 5799999987433
Q ss_pred ceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 215 NYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 215 kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
..... .+..+.+.|.+|++.++
T Consensus 83 ~~~~~------~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRE------SRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEE------ESSCCHHHHHHHHHTTC
T ss_pred EEEEE------eCCcCHHHHHHHHHHhh
Confidence 22111 23468899999998754
No 75
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.71 E-value=0.0013 Score=49.44 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=69.7
Q ss_pred ChhhHHHhh--cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeC
Q 020623 135 NQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 212 (323)
Q Consensus 135 t~~~~~~~~--~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~ 212 (323)
+.+++.... ..++++++.|... .=..-..+...+.+++++++++.|+.+|.+..+.+++.||+ ...|.++++..
T Consensus 8 ~~~~~~~~~~~~~~~~v~v~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~ 83 (107)
T 1gh2_A 8 SDPDFQPELSGAGSRLAVVKFTMR-GCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNI---SATPTFQFFRN 83 (107)
T ss_dssp SGGGHHHHHHHTTTSCEEEEEECS-SCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSEEEEEET
T ss_pred CHHHHHHHHHhCCCCEEEEEEECC-CChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCC---CcccEEEEEEC
Confidence 567887766 4567887777763 22334667788999999997799999999987788889999 57999988854
Q ss_pred CcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 213 NENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 213 ~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.+......| .+.+.|.+|++.++
T Consensus 84 G~~~~~~~G-------~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 84 KVRIDQYQG-------ADAVGLEEKIKQHL 106 (107)
T ss_dssp TEEEEEEES-------SCHHHHHHHHHHHH
T ss_pred CeEEEEEeC-------CCHHHHHHHHHHhc
Confidence 332222122 34556999998875
No 76
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.68 E-value=0.00062 Score=58.25 Aligned_cols=108 Identities=7% Similarity=0.072 Sum_probs=82.2
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
+.+..++.+++......++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.++..||+ ..+|.+
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~-wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 172 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSP-GCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGV---NSYPSL 172 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECT-TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCC-CChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCC---CcCCeE
Confidence 4577889999988766677888877763 223346677889999999987 99999999888888899999 579999
Q ss_pred EEEeCCcc-eeeccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 208 VVWDGNEN-YLTVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 208 vI~~~~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
+++ .+++ .... .+..+.+.|.+||+..+...+.
T Consensus 173 ~~~-~~G~~~~~~------~G~~~~~~l~~~i~~~l~~~~~ 206 (210)
T 3apq_A 173 FIF-RSGMAAVKY------NGDRSKESLVAFAMQHVRSTVT 206 (210)
T ss_dssp EEE-CTTSCCEEC------CSCCCHHHHHHHHHHHHHCCSS
T ss_pred EEE-ECCCceeEe------cCCCCHHHHHHHHHHhCcccce
Confidence 988 4432 2222 3457889999999998876543
No 77
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.67 E-value=0.00026 Score=54.00 Aligned_cols=101 Identities=8% Similarity=0.083 Sum_probs=73.3
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+++.+++.... .++++++.|... .=..-..+...|.++++++++ +.|+.+|.+..+.+++.||+ ...|.+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~-wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~ 77 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAP-WCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGV---MSIPTLLV 77 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECT-TBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTC---CSBSEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 5678899998777 667777777653 112234566778889999886 99999999887788899999 57999998
Q ss_pred EeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 210 WDGNENY-LTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 210 ~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+ .+++. ... .+..+.+.|.+|++..+.
T Consensus 78 ~-~~G~~~~~~------~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 78 L-KDGEVVETS------VGFKPKEALQELVNKHLL 105 (112)
T ss_dssp E-ETTEEEEEE------ESCCCHHHHHHHHHTTSC
T ss_pred E-eCCEEEEEE------eCCCCHHHHHHHHHHHHH
Confidence 8 44432 111 234678899999886654
No 78
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00072 Score=51.22 Aligned_cols=102 Identities=18% Similarity=0.311 Sum_probs=71.0
Q ss_pred eeecCh-hhHHHhhcC---CCcEEEEEEeCCChhHHHHHHHHHHHHHHh--CCCeEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 131 SVPINQ-DTLNLLKDD---KRKIVLAIVEDETEEKSQKLVTTLKAAASA--NRELVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 131 v~~~t~-~~~~~~~~~---~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~--~~~l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
|.+++. +++...... ++++++.|... .=..-..+...+.+++++ ++++.|+.+|.+..+.+++.||+ ...
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~ 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTS-WAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI---SAV 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECC-C--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC---CSS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECC-CCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC---Ccc
Confidence 456776 888877654 67887777653 112345677788999998 45699999999888888889999 579
Q ss_pred CeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 205 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 205 P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
|.+++....+......| .+.+.|.+|++.++.
T Consensus 78 Pt~~~~~~G~~~~~~~G-------~~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 PYFIIIHKGTILKELSG-------ADPKEYVSLLEDCKN 109 (112)
T ss_dssp SEEEEEETTEEEEEECS-------CCHHHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEecC-------CCHHHHHHHHHHHHh
Confidence 99988853322111122 245579999998764
No 79
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.66 E-value=0.00026 Score=59.50 Aligned_cols=119 Identities=10% Similarity=0.040 Sum_probs=81.3
Q ss_pred HHHHhcCCCceecCChHHHHHHHHhc-CCcccEEEEecC--------C-------hhHHHHHHHhhc-----CceeEEee
Q 020623 20 YLKKFVAPDVSILNSDAEVSDFVENA-GTFFPLFIGFGL--------D-------ESVMSNLALKYK-----KKAWFAVA 78 (323)
Q Consensus 20 ~l~k~~~p~v~~i~s~~~l~~fl~~~-~~~~~~vVgf~~--------~-------~~~f~~~A~~~~-----~~~~F~~~ 78 (323)
.+.......|..|+ .+.+++++... +. +++|-|.. . .+.|+++|.++. +++.|+.+
T Consensus 11 l~~l~~~~~vi~lt-~~nF~~~v~~~~~~--~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 11 ILQLKDDTGVITVT-ADNYPLLSRGVPGY--FNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp HHTTCCTTSEEECC-TTTHHHHTTCCTTC--EEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHhhccCCCEECC-HHHHHHHHcccCCC--cEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 33334455688885 68999888643 43 56777755 2 248899999987 67888876
Q ss_pred c-ccchhhHhhcCCCCCCeEEEecCCCCCC-----------ccc---cC-CCCHHHHHHHHHhhcCCCeeecChhhHHH
Q 020623 79 K-DFSEDTMVLYDFDKVPALVALQPSYNEH-----------NIF---YG-PFDEEFLEEFIKQNFLPLSVPINQDTLNL 141 (323)
Q Consensus 79 ~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~-----------~~y---~g-~~~~~~L~~fI~~~~~Plv~~~t~~~~~~ 141 (323)
+ +..++++.+|++.+.|++++|+++.... ..| .| .++.+.|.+||.+..-+.+....+-|+..
T Consensus 88 D~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 88 DVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp ETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC---
T ss_pred ECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHH
Confidence 4 2467889999999999999999864322 234 24 67889999999987655554444445443
No 80
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.65 E-value=0.001 Score=50.68 Aligned_cols=104 Identities=9% Similarity=0.191 Sum_probs=73.5
Q ss_pred Ceeec-ChhhHHHhhcC----CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 130 LSVPI-NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 130 lv~~~-t~~~~~~~~~~----~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
.+.++ +.+++...... ++++++.|... .-..-..+...|++++++++++.|+.+|.+..+.+++.||+ ...
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~ 82 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTAS-WCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNV---EAM 82 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSB
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECC-CCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCC---CcC
Confidence 45555 46777765543 67887777753 22334567788999999998899999999887788899999 579
Q ss_pred CeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 205 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 205 P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
|.++++...+...... + .+.+.|.++|+.+++.
T Consensus 83 Pt~~~~~~g~~~~~~~------g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 83 PTFLFIKDGEKVDSVV------G-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp SEEEEEETTEEEEEEE------S-CCHHHHHHHHHHHHC-
T ss_pred cEEEEEeCCeEEEEec------C-CCHHHHHHHHHHHhcc
Confidence 9998875332221211 2 4678999999998764
No 81
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.63 E-value=0.0011 Score=51.12 Aligned_cols=103 Identities=12% Similarity=0.174 Sum_probs=74.0
Q ss_pred CCCeeecChhhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCc-chhhHhhhcCCcCCCCC
Q 020623 128 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKL 204 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~-~~~~~~~~~gl~~~~~~ 204 (323)
...+..++.+++..... .++++++.|... .=..-..+...+.+++++++++.|+.+|.+ ....+++.||+ ...
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~-wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v---~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQ-WCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECC-cCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCC---Cee
Confidence 45678889888887654 567887777753 223345677889999999989999999997 56778888999 578
Q ss_pred CeEEEEeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 205 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 205 P~ivI~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
|.+++....+ .... .| ...+.+.+|++.++
T Consensus 93 Pt~~~~~~G~~~~~~-~G-------~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEV-TG-------AKYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEE-ES-------SCHHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEE-cC-------CCHHHHHHHHHHhh
Confidence 9987764332 2222 12 24789999998875
No 82
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.61 E-value=0.0011 Score=50.67 Aligned_cols=99 Identities=12% Similarity=0.285 Sum_probs=71.7
Q ss_pred eeecCh-hhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeE
Q 020623 131 SVPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 207 (323)
Q Consensus 131 v~~~t~-~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~i 207 (323)
+.+++. +++..... .++++++.|... .=..-..+...+.++++++ ++.|+.+|.+..+.+++.||+ ...|.+
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~-wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFAT-WCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNI---SAMPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECT-TCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTC---CSSSEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECC-CCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCC---CccceE
Confidence 667776 78877665 567887777753 2233466778899999998 799999999888888899999 579998
Q ss_pred EEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 208 VVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 208 vI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
++....+...... + .+.+.|.+|++++
T Consensus 90 ~~~~~G~~~~~~~------G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 90 IAIKNGEKVGDVV------G-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEETTEEEEEEE------S-SCHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEe------C-CCHHHHHHHHHHh
Confidence 8875332211111 2 4678899999876
No 83
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.61 E-value=0.00079 Score=51.25 Aligned_cols=96 Identities=11% Similarity=0.230 Sum_probs=67.7
Q ss_pred ChhhHHHhhc-C-CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeC
Q 020623 135 NQDTLNLLKD-D-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 212 (323)
Q Consensus 135 t~~~~~~~~~-~-~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~ 212 (323)
|.+++..... . ++++++-|... -=..-+.+...+.++|+.++++.|+.+|.++.+.+++.||+ ..+|.+++...
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V---~~~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYAT-WCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQI---ACMPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECT-TCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECC-CCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCC---CeecEEEEEEC
Confidence 3466766543 3 45666656652 11334567788999999999999999999988899999999 57999988764
Q ss_pred CcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 213 NENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 213 ~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.+.-....| .+.+.|.+||++.
T Consensus 83 G~~v~~~~G-------~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSG-------ANYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEES-------CCHHHHHHHHHHH
T ss_pred CEEEEEEeC-------cCHHHHHHHHHhc
Confidence 332211122 4678999999875
No 84
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.61 E-value=0.00068 Score=54.43 Aligned_cols=113 Identities=13% Similarity=0.092 Sum_probs=76.0
Q ss_pred HHHHHhhcCCCeeecChhhHHHhhcCC-CcEEEEEEeCCC-hhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhc
Q 020623 120 EEFIKQNFLPLSVPINQDTLNLLKDDK-RKIVLAIVEDET-EEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTF 196 (323)
Q Consensus 120 ~~fI~~~~~Plv~~~t~~~~~~~~~~~-~~~v~~f~~~~~-~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~ 196 (323)
.+-+..+.+| ++|.++|....... .|+++.|...-- -..-+.+...|.++|++|.+ +.|+.+|.++.+.++..|
T Consensus 9 ~rl~~~~g~~---~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~y 85 (137)
T 2qsi_A 9 RAAARPNAPT---LVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARF 85 (137)
T ss_dssp --------CE---EECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHH
T ss_pred HHHHHhcCCc---ccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHc
Confidence 3344445555 77888888765444 477777765211 02234566899999999987 999999999988999999
Q ss_pred CCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 197 EANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 197 gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
|+ ...|.++++...+.-... .+-...+.|.++|+.+++.
T Consensus 86 gV---~siPTlilFkdG~~v~~~------vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 86 GV---AVCPSLAVVQPERTLGVI------AKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp TC---CSSSEEEEEECCEEEEEE------ESCCCHHHHHHHHHHHHHH
T ss_pred CC---ccCCEEEEEECCEEEEEE------eCCCCHHHHHHHHHHHhcc
Confidence 99 589999998754321111 2345678999999998843
No 85
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.60 E-value=0.00068 Score=51.22 Aligned_cols=102 Identities=9% Similarity=0.157 Sum_probs=71.6
Q ss_pred eeec-ChhhHHHhhc----CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 131 SVPI-NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 131 v~~~-t~~~~~~~~~----~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
+.++ +.+++..... .++++++.|... .-..-..+...|.++++.++++.|+.+|.+..+.+++.||+ ...|
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~-~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~P 81 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTAS-WCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNV---EAMP 81 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECS-SCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHC---SSTT
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECC-CCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCC---Cccc
Confidence 4444 5677766544 367777777653 22334567788999999998899999999888888899999 5789
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+++....+...... + .+.+.|.+|+++++.
T Consensus 82 t~~~~~~G~~~~~~~------g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 82 TFIFLKDGKLVDKTV------G-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEEEEETTEEEEEEE------C-CCTTHHHHHHHHHHH
T ss_pred EEEEEeCCEEEEEEe------c-CCHHHHHHHHHHhhc
Confidence 998885332211111 2 467889999998874
No 86
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.59 E-value=0.00057 Score=60.55 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=73.8
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEec--C-C---hhHHHHHHHhhc---CceeEEeec-cc-----chhhHhhcCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFG--L-D---ESVMSNLALKYK---KKAWFAVAK-DF-----SEDTMVLYDF 91 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~--~-~---~~~f~~~A~~~~---~~~~F~~~~-~~-----~~~~~~~~~~ 91 (323)
+.|..++ .+++++++..+. +++|-|+ . . .+.|.++|..+. .++.|+.++ +. ..+++.+|++
T Consensus 16 ~~v~~Lt-~~nF~~vi~~~~---~vlV~Fy~~ApWCgl~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V 91 (248)
T 2c0g_A 16 TGCVDLD-ELSFEKTVERFP---YSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV 91 (248)
T ss_dssp TTCEECC-TTTHHHHHTTSS---EEEEEEEESSCCSHHHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTC
T ss_pred CCcEECC-HHHHHHHHhcCC---CEEEEEECCCCCCccHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCC
Confidence 3477774 588988886655 5778777 3 3 468889999884 467887775 23 4689999999
Q ss_pred C--CCCeEEEecCCC-CCCccc--cCCCCHHHHHHHHHhhcC
Q 020623 92 D--KVPALVALQPSY-NEHNIF--YGPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 92 ~--~~p~ivv~k~~~-~~~~~y--~g~~~~~~L~~fI~~~~~ 128 (323)
. ..|++++|+ +. .....| .|..+.+.|.+||..+.-
T Consensus 92 ~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 92 DDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 9 899999998 54 234567 899999999999999853
No 87
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.58 E-value=0.00052 Score=53.32 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=78.5
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
..+..++.+++..+.. .++++.|... .=..-..+...|.++++++++ +.|+.+|.+....+++.|++ ...|.
T Consensus 7 ~~v~~l~~~~f~~~~~--~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRELLE--GDWMIEFYAP-WCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII---NALPT 80 (126)
T ss_dssp CSEEECCTTTHHHHTS--SEEEEEEECS-SCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CccEEecHHHHHHHhC--CCEEEEEECC-CCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---cccCE
Confidence 4578899999998765 3466666553 223345677888889988873 99999999888888899999 57999
Q ss_pred EEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 207 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 207 ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
++++. +++-... .+..+.+.|.+|+++.+...++|.
T Consensus 81 ~~~~~-~G~~~~~------~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 81 IYHCK-DGEFRRY------QGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EEEEE-TTEEEEC------CSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EEEEe-CCeEEEe------ecCCCHHHHHHHHHHHhhccCCCc
Confidence 99884 4442222 345788999999998876655553
No 88
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.58 E-value=0.00058 Score=52.89 Aligned_cols=103 Identities=11% Similarity=0.161 Sum_probs=73.7
Q ss_pred CCeeecCh-hhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 129 PLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 129 Plv~~~t~-~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
+.+..++. +++......++++++.|.... -..-..+...|.++++++++ +.|+.+|.+..+.+++.||+ ...|
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~-C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v---~~~P 90 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATW-CGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGI---RAMP 90 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTT-CSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTC---CSSS
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCC-CHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCC---Cccc
Confidence 34555554 778777777778877777531 12345677788999999886 99999999988888899999 5799
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.++++...+...... +. +.+.|.+||+.++
T Consensus 91 t~~~~~~G~~~~~~~------G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 91 TFVFFKNGQKIDTVV------GA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEEETTEEEEEEE------SS-CHHHHHHHHHHHT
T ss_pred EEEEEECCeEEeeEc------CC-CHHHHHHHHHHhh
Confidence 998886433221121 23 7889999999875
No 89
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.58 E-value=0.00015 Score=55.33 Aligned_cols=105 Identities=9% Similarity=0.135 Sum_probs=74.6
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---C-eEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---E-LVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~-l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
.+..++.+++......++++++.|.... =..-..+...+.++++.++ . +.|+.+|....+.+++.+|+ ...|
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~-C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~P 83 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPW-CGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV---RGYP 83 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSS-CSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTC---CSSS
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCC-CHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCC---Cccc
Confidence 4778899999887777778877776531 1122345567788888875 2 99999999877778888999 5799
Q ss_pred eEEEEeCCcce--eeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 206 KMVVWDGNENY--LTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 206 ~ivI~~~~~kY--~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.++++...+.. ... .+..+.+.|.+|++..++.
T Consensus 84 t~~~~~~g~~~~~~~~------~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRNGDTASPKEY------TAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEESSCSSSCEEC------CCCSSHHHHHHHHHTTSCC
T ss_pred EEEEEeCCCcCCcccc------cCccCHHHHHHHHHhccCC
Confidence 99988543322 222 2357889999999876543
No 90
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.56 E-value=0.0011 Score=53.67 Aligned_cols=105 Identities=10% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCeeecC-hhhHHHhhcC--CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 129 PLSVPIN-QDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 129 Plv~~~t-~~~~~~~~~~--~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
..+..++ .+++..+... ++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ ..+|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~-wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~P 87 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAP-WAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEI---SSVP 87 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSS
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECC-CCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCC---CCCC
Confidence 4455665 5777776654 67887777753 12334567788999999997799999999988888899999 5799
Q ss_pred eEEEEeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 206 KMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 206 ~ivI~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
.+++++ +++. ....| .+.+.|.+||+.++...
T Consensus 88 t~~~~~-~G~~~~~~~G-------~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 88 TFLFFK-NSQKIDRLDG-------AHAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEEEE-TTEEEEEEES-------SCHHHHHHHHHHHSCTT
T ss_pred EEEEEE-CCEEEEEEeC-------CCHHHHHHHHHHHhccc
Confidence 999998 5432 11112 46788999999987654
No 91
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.56 E-value=0.0007 Score=59.66 Aligned_cols=97 Identities=10% Similarity=0.151 Sum_probs=74.7
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecC--C----hhHHHHHHHhhc--CceeEEeec-c-----cchhhHhhcCCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGL--D----ESVMSNLALKYK--KKAWFAVAK-D-----FSEDTMVLYDFD 92 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~--~----~~~f~~~A~~~~--~~~~F~~~~-~-----~~~~~~~~~~~~ 92 (323)
..|..|+ .++++++++.+. +++|-|+. . .+.|.++|..+. .++.|+.++ + ...+++.+|++.
T Consensus 5 ~~v~~Lt-~~nF~~~i~~~~---~vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLD-TVTFYKVIPKSK---FVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECC-TTHHHHHGGGCS---EEEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECC-HHHHHHHHcCCC---CEEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 3467785 588988887665 57788765 3 467889999886 357887775 1 157799999998
Q ss_pred --CCCeEEEecCCC-CCCccccCCCCHHHHHHHHHhhc
Q 020623 93 --KVPALVALQPSY-NEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 93 --~~p~ivv~k~~~-~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
..|++++|+++. .....|.|..+.+.|.+||..+.
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 899999998753 23557889999999999999986
No 92
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.55 E-value=0.0015 Score=50.90 Aligned_cols=106 Identities=10% Similarity=0.059 Sum_probs=74.7
Q ss_pred CCCeeecChhhHHHhh-cCCC--cEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 128 LPLSVPINQDTLNLLK-DDKR--KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~-~~~~--~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
+.-+.++|.+++.... ..+. ++++-|... .-..-+.+...|.++|++|+++.|+.+|.++. .+.|++ ..+
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~-wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v---~~~ 74 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYRS-SIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHD---NCL 74 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEECT-TSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCG---GGC
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeCC-CChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCC---CCC
Confidence 5668889999988644 3333 676667653 22344677789999999998899999999864 577888 579
Q ss_pred CeEEEEeCCcceeeccCCCCC-CCCCCHHHHHHHHHH
Q 020623 205 PKMVVWDGNENYLTVIGSESI-DEEDQGSQISRFLEG 240 (323)
Q Consensus 205 P~ivI~~~~~kY~~~~~~~~~-~~~~t~~~I~~Fi~~ 240 (323)
|.+++....+.-....|..++ ...++.+.|..|+..
T Consensus 75 PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999998764322222243332 236899999999965
No 93
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.54 E-value=0.00065 Score=59.97 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=79.4
Q ss_pred cccccC--CCCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEe-cCC-----h-------hHHHHHHHh
Q 020623 4 IPTEYY--GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGF-GLD-----E-------SVMSNLALK 68 (323)
Q Consensus 4 ~~~eY~--G~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf-~~~-----~-------~~f~~~A~~ 68 (323)
....|. |++++++|.+|++...-|-|.+++. +.+..+.... +.++.| +.+ . ..+.++|++
T Consensus 91 ~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~~~~~----~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~ 165 (250)
T 3ec3_A 91 RMHVMDVQGSTEASAIKDYVVKHALPLVGHRKT-SNDAKRYSKR----PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKD 165 (250)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHSSCTEEEECT-TTHHHHSCSS----SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTT
T ss_pred cceeccCCCCCCHHHHHHHHHHcCCCceeecCc-cchhhhhccC----ccEEEEEecccccccchhHHHHHHHHHHHHHh
Confidence 346788 5899999999999999999999975 4555544322 334443 211 1 256788999
Q ss_pred hcCceeEEeeccc-chhhHhhcCCCC---CCeEEEecCCCCCCcccc-CCCCHHHHHHHHHhhcC
Q 020623 69 YKKKAWFAVAKDF-SEDTMVLYDFDK---VPALVALQPSYNEHNIFY-GPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 69 ~~~~~~F~~~~~~-~~~~~~~~~~~~---~p~ivv~k~~~~~~~~y~-g~~~~~~L~~fI~~~~~ 128 (323)
++ .+.|+.++.. -...+..+|+.. .|.++++.. .+.++.+. +.++.+.|.+|+..-.-
T Consensus 166 ~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 166 FP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALREFVMAFKK 228 (250)
T ss_dssp CT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHHHHHHHHT
T ss_pred hc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHHHHHHHHC
Confidence 99 8888877431 123455677752 246666653 34455565 67999999999986653
No 94
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.51 E-value=0.0015 Score=50.89 Aligned_cols=100 Identities=9% Similarity=0.118 Sum_probs=70.3
Q ss_pred Ceeec-ChhhHHHhhc----CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 130 LSVPI-NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 130 lv~~~-t~~~~~~~~~----~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
.+.++ +.+++..... .++++++.|... .=..-..+...|.+++++++++.|+.+|.+....+++.||+ ...
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~-wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~ 92 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTAS-WCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAI---QAM 92 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECT-TCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTC---CSS
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCC---Ccc
Confidence 34555 5566665443 367777777653 22334567788999999998899999999887888899999 578
Q ss_pred CeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 205 PKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 205 P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
|.+++.. +++ +.. . + .+.+.|.++|+.++
T Consensus 93 Pt~~~~~-~G~~~~~~-~------G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLK-EGKILDKV-V------G-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEE-TTEEEEEE-E------S-CCHHHHHHHHHHHC
T ss_pred CEEEEEE-CCEEEEEE-e------C-CCHHHHHHHHHHhc
Confidence 9988874 432 222 1 2 47889999998875
No 95
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.48 E-value=0.00046 Score=54.06 Aligned_cols=109 Identities=9% Similarity=0.128 Sum_probs=77.9
Q ss_pred CCCeeecChhhHHHhhc-CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC--C-eEEEEEcCcchhhHhhhcCCcCCCC
Q 020623 128 LPLSVPINQDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--E-LVFCYVGIKQFADFADTFEANKKSK 203 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~-~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~--~-l~F~~vd~~~~~~~~~~~gl~~~~~ 203 (323)
-+.|..++.+++..... .++++++.|... .=..-..+...|.+++++++ + +.|+.+|.+....+.+.|++ ..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAP-WCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKV---EG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCT-TCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCC---SS
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECC-CChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCC---Cc
Confidence 35688899988887654 367777766642 11234567778899999886 4 99999999876666777888 57
Q ss_pred CCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 204 LPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 204 ~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
+|.+++++..++ ..... .+..+.+.|.+||+..+...
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~-----gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFE-----GGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp SSEEEEECTTCTTSCEECC-----SSCCSTTHHHHHHHHHSSSC
T ss_pred CCEEEEEeCCCcccceEec-----CCCcCHHHHHHHHHHhcccc
Confidence 999999986532 11111 13467889999999997655
No 96
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.47 E-value=0.0018 Score=54.36 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=83.4
Q ss_pred HHHHHHhhcCCCeeecChhhHHHhhcC--CCcEEEEEEeCC------ChhHHHHHHHHHHHHHHhCC-----C-eEEEEE
Q 020623 119 LEEFIKQNFLPLSVPINQDTLNLLKDD--KRKIVLAIVEDE------TEEKSQKLVTTLKAAASANR-----E-LVFCYV 184 (323)
Q Consensus 119 L~~fI~~~~~Plv~~~t~~~~~~~~~~--~~~~v~~f~~~~------~~e~~~~~~~~l~~~A~~~~-----~-l~F~~v 184 (323)
+.+++....-..+.++|..||..+... +.++++.|.... -=..-+.+...|.++|+++. + +.|+.+
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 344455455567999999999988654 346677676521 00123567789999999876 6 999999
Q ss_pred cCcchhhHhhhcCCcCCCCCCeEEEEeCCc--c---eeecc---CCCCCC-C-CCCHHHHHHHHHHHHc
Q 020623 185 GIKQFADFADTFEANKKSKLPKMVVWDGNE--N---YLTVI---GSESID-E-EDQGSQISRFLEGYRE 243 (323)
Q Consensus 185 d~~~~~~~~~~~gl~~~~~~P~ivI~~~~~--k---Y~~~~---~~~~~~-~-~~t~~~I~~Fi~~~~~ 243 (323)
|.++.+.++..||| ...|.++++.+.+ . +.... ...++. + ..+.+.|.+||.+-..
T Consensus 88 D~d~~~~la~~~~I---~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 88 DVNEVPQLVKDLKL---QNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp ETTTCHHHHHHTTC---CSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred ECccCHHHHHHcCC---CCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 99988899999999 6899999988632 2 00000 000111 2 5788999999998665
No 97
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.44 E-value=0.0014 Score=49.20 Aligned_cols=95 Identities=13% Similarity=0.281 Sum_probs=69.5
Q ss_pred CCceecCChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCe
Q 020623 27 PDVSILNSDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPA 96 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ 96 (323)
.++..+ +.+++++.+ +.++ +++|-|... ...+.+++..+.+.+.|...+ +..++++.++++...|+
T Consensus 4 ~~v~~l-~~~~~~~~~~~~~~---~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 79 (111)
T 3gnj_A 4 MSLEKL-DTNTFEQLIYDEGK---ACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQ 79 (111)
T ss_dssp CCSEEC-CHHHHHHHHTTSCC---CEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCE
T ss_pred Ccceec-CHHHHHHHHHhcCC---EEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCE
Confidence 457778 689999988 4444 577777543 246788898888777776653 23567888999999999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++|+++ .....+.|..+.+.|.+||.+.
T Consensus 80 ~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 80 ILYFKDG-EYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEETT-EEEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEECC-EEEEEEeccCCHHHHHHHHHHH
Confidence 9999642 1222466888999999999865
No 98
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.42 E-value=0.00055 Score=53.55 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=71.3
Q ss_pred CCCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 128 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
.|.+...+.+.+......++++++.|... .=..-..+...+.++++++++ +.|+.+|.+..+.+++.||+ ...|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt 99 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAK-WCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSV---KSLPT 99 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECT-TCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTC---CSSSE
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECC-CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CCcCE
Confidence 44555555555555555677887777753 123345677889999999886 99999999988888999999 57999
Q ss_pred EEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 207 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 207 ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
++++...+..... .+..+.+.|.+|++.
T Consensus 100 ~~~~~~G~~~~~~------~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 100 IILLKNKTMLARK------DHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEETTEEEEEE------SSCCCHHHHHHHHTT
T ss_pred EEEEECCEEEEEe------cCCCCHHHHHHHHHh
Confidence 9988533222222 235788999999864
No 99
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.42 E-value=0.0013 Score=49.20 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=70.4
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCe
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPA 96 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ 96 (323)
++.+..+ +.+++++.+..++ +++|-|+.. ...+.+++.++.+.+.|...+ +...+++.++++...|+
T Consensus 3 ~~~v~~l-~~~~~~~~~~~~~---~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt 78 (109)
T 3tco_A 3 EDVTLVL-TEENFDEVIRNNK---LVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPT 78 (109)
T ss_dssp CCCCEEC-CTTTHHHHHHHSS---EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCeEEEe-cHHHHHHHHhcCC---eEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCE
Confidence 3456777 5689999888776 567777543 246788899888777776553 24667888999999999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++|+++ .....+.|..+.+.|.+||.+.
T Consensus 79 ~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 79 TLIFVNG-QLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEcCC-cEEEeeeccCCHHHHHHHHHHH
Confidence 9999642 2223467888999999999865
No 100
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.41 E-value=0.00095 Score=50.73 Aligned_cols=102 Identities=4% Similarity=0.057 Sum_probs=70.4
Q ss_pred eeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEE
Q 020623 131 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 210 (323)
Q Consensus 131 v~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~ 210 (323)
+..++.+++ .....++++++.|... .=..-..+...|.++++.++++.|+.+|.+....+++.+|+ ...|.++++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~-wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKN-LCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGF---ERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECS-SCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTC---CSSCEEEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECC-CCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCC---cccCEEEEE
Confidence 345667788 4444567777767653 11234567778899999988899999999877788889999 579999988
Q ss_pred eCCcce-eeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 211 DGNENY-LTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 211 ~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
. +++. ... .+..+.+.|.++++.+..+
T Consensus 80 ~-~G~~v~~~------~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 R-DGKVAKVF------SGIMNPRELQALYASIHHH 107 (110)
T ss_dssp E-SSSEEEEE------ESCCCHHHHHHHHHTC---
T ss_pred E-CCEEEEEE------cCCCCHHHHHHHHHHHhhh
Confidence 4 4322 111 2346789999999887654
No 101
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.41 E-value=0.0014 Score=49.48 Aligned_cols=95 Identities=14% Similarity=0.257 Sum_probs=68.5
Q ss_pred CCceecCChHHHHHHHHh----cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCC
Q 020623 27 PDVSILNSDAEVSDFVEN----AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDK 93 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~----~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~ 93 (323)
..+..|++.+++++.+.. ++ +++|-|... ...+.+++..+.+++.|...+ +...+++.++++..
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~---~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHK---PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCC---eEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCc
Confidence 357889889999998875 44 467777543 246788888887667666553 23567888999988
Q ss_pred CCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 94 VPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 94 ~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
.|++++++++ .....+.|. +.+.|.+||.+.
T Consensus 79 ~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDG-VKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEECC-eEEEEEcCC-CHHHHHHHHHHH
Confidence 9999999642 122245687 889999999865
No 102
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.41 E-value=0.0025 Score=49.05 Aligned_cols=104 Identities=18% Similarity=0.271 Sum_probs=72.5
Q ss_pred CCeeec--ChhhHH-HhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 129 PLSVPI--NQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 129 Plv~~~--t~~~~~-~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
|.+..+ +.+++. .+...++++++.|... .=..-..+...|.+++++++++.|+.+|.+....+++.|++ ...|
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i---~~~P 78 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFAT-WCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGV---SSIP 78 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCC---CCCC
Confidence 345566 567777 4555677888777753 12334567788899999995599999999988888899999 5799
Q ss_pred eEEEEeC---Ccc-eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 206 KMVVWDG---NEN-YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 206 ~ivI~~~---~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+++++. +++ .....| ...+.|.++++.+..
T Consensus 79 t~~~~~~~~~~G~~~~~~~G-------~~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 79 ALFFVKKEGNEIKTLDQFVG-------ADVSRIKADIEKFKH 113 (118)
T ss_dssp EEEEEEEETTEEEEEEEEES-------CCHHHHHHHHHHHC-
T ss_pred EEEEEeCCCCcceEEEeecC-------CCHHHHHHHHHHhhh
Confidence 9998875 132 111112 456779999988754
No 103
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.40 E-value=0.0015 Score=48.61 Aligned_cols=92 Identities=17% Similarity=0.289 Sum_probs=66.2
Q ss_pred ceecCChHHHHHHHHh--cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 29 VSILNSDAEVSDFVEN--AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~--~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
+..|++.+++++.++. ++ +++|-|... ...+.+++.++.+ +.|...+ +...+++.++++...|++
T Consensus 2 v~~i~~~~~~~~~l~~~~~~---~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 77 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDK---LVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTS---CEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEE
T ss_pred eEEcCCHHHHHHHHHhcCCC---eEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEE
Confidence 4678899999999884 43 567777543 2467788888865 6555443 235678889999999999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++|+++ +....+.|. +.+.|.+||.+.
T Consensus 78 ~~~~~g-~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKG-QKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 999652 222246687 899999999864
No 104
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.40 E-value=0.0012 Score=54.16 Aligned_cols=106 Identities=18% Similarity=0.218 Sum_probs=71.3
Q ss_pred HHHHHHHHHhcCCCceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchh
Q 020623 15 ELLVRYLKKFVAPDVSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSED 84 (323)
Q Consensus 15 ~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~ 84 (323)
.++...+..++ +..|.|.+++++.+.+ .+. +++|-|+.. .+.+.++|.++.+.+.|..++ +-.++
T Consensus 12 ~~~~~~~~s~m---v~~l~t~~~f~~~v~~~~~k--~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e 86 (160)
T 2av4_A 12 SGLVPRGSSFM---LQHLNSGWAVDQAIVNEDER--LVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD 86 (160)
T ss_dssp ----------C---CEECCSHHHHHHHHHHCSSS--EEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT
T ss_pred ccccccchhhh---hhccCCHHHHHHHHHhcCCC--EEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH
Confidence 34555555443 7789999999876653 333 688888753 358899999998777777663 24578
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCc----------cccCCCC-HHHHHHHHHhhc
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHN----------IFYGPFD-EEFLEEFIKQNF 127 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~----------~y~g~~~-~~~L~~fI~~~~ 127 (323)
++.+|++...|++++|+++ +.. ...|... .++|.++|....
T Consensus 87 ~a~~y~V~siPT~~fFk~G--~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 87 FNTMYELYDPVSVMFFYRN--KHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp TTTTTTCCSSEEEEEEETT--EEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEEECC--EEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 8899999999999999863 332 3457666 888999997653
No 105
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.38 E-value=0.0021 Score=54.90 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=77.1
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
+.+..+ +.++++..+..+. +++|-|... ...+.+++.++.+.+.|+.++ +...+++.++++...|++
T Consensus 97 ~~v~~l-~~~~f~~~~~~~~---~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 97 PEIITL-ERREFDAAVNSGE---LWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp TTSEEC-CHHHHHHHHHHSC---CEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CceEEe-cHHHHHHHHccCC---cEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 346777 5788988886666 467777543 247888999988777776663 235678889999999999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecC
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN 135 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t 135 (323)
++|+++ .....+.|..+.+.|.+||....-+.+.+++
T Consensus 173 ~~~~~G-~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 173 FIFRSG-MAAVKYNGDRSKESLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp EEECTT-SCCEECCSCCCHHHHHHHHHHHHHCCSSCC-
T ss_pred EEEECC-CceeEecCCCCHHHHHHHHHHhCcccceecC
Confidence 999642 2334577988999999999998877777665
No 106
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.37 E-value=0.00069 Score=54.63 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=74.0
Q ss_pred HHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecCC----------hhHHHHHHHhhcCc-eeEEeec-ccchh
Q 020623 17 LVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD----------ESVMSNLALKYKKK-AWFAVAK-DFSED 84 (323)
Q Consensus 17 Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~----------~~~f~~~A~~~~~~-~~F~~~~-~~~~~ 84 (323)
+++-|... .+..+ +.+++++.+..+. +++|-|..+ ...+.++|.+|.+. +.|+.++ +-+++
T Consensus 10 l~~rl~~~---g~~~~-t~~~F~~~v~~~~---~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~ 82 (140)
T 2qgv_A 10 LWQRMLAR---GWTPV-SESRLDDWLTQAP---DGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEA 82 (140)
T ss_dssp HHHHHHHT---TCEEC-CHHHHHHHHHTCS---SEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHH
T ss_pred HHHHHHhc---CCccC-CHHHHHHHHhCCC---CEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHH
Confidence 34444443 56677 5799999886554 567766332 35789999999887 8887763 23677
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
++.+|++.+.|++++||++ +......|....+.|.+||....
T Consensus 83 lA~~ygV~sIPTlilFk~G-~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 83 IGDRFGAFRFPATLVFTGG-NYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp HHHHHTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHcCCccCCEEEEEECC-EEEEEEecCCCHHHHHHHHHHHh
Confidence 8999999999999999963 22223558778889999998765
No 107
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.36 E-value=0.0011 Score=57.09 Aligned_cols=116 Identities=14% Similarity=0.072 Sum_probs=81.9
Q ss_pred cccccCCCCChHHHHHHHHHhcC--CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCce
Q 020623 4 IPTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKA 73 (323)
Q Consensus 4 ~~~eY~G~R~a~~Iv~~l~k~~~--p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~ 73 (323)
.+..|.|.|+.+.|.+|+.+.+. ..+..+ +.+.++.++..++. ++++-|... ...+.++|..+ +.+
T Consensus 93 ~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~--~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v 168 (229)
T 2ywm_A 93 YGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIP--IEIWVFVTTSCGYCPSAAVMAWDFALAN-DYI 168 (229)
T ss_dssp CCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSC--EEEEEEECTTCTTHHHHHHHHHHHHHHC-TTE
T ss_pred ccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCC--eEEEEEECCCCcchHHHHHHHHHHHHHC-CCe
Confidence 35679999999999999998743 345666 56777777654442 235656542 24677888887 466
Q ss_pred eEEeecc-cchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 74 WFAVAKD-FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 74 ~F~~~~~-~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
.|...+. ...+++.+|++...|++++ + ++...|.|..+.+.|.+||....
T Consensus 169 ~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~--G~~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 169 TSKVIDASENQDLAEQFQVVGVPKIVI--N--KGVAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp EEEEEEGGGCHHHHHHTTCCSSSEEEE--G--GGTEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHcCCcccCEEEE--C--CEEEEeeCCCCHHHHHHHHHHHh
Confidence 6665532 3567888999989999888 3 23333779889999999998653
No 108
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.33 E-value=0.0021 Score=51.99 Aligned_cols=111 Identities=14% Similarity=0.159 Sum_probs=70.5
Q ss_pred CCCceecCChHHHHHHHHh--cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCC
Q 020623 26 APDVSILNSDAEVSDFVEN--AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~--~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~ 94 (323)
...+..+++.++++++++. ++ +++|-|... ...+.+++.++. .+.|..++ +...+++.+|++...
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~---~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~ 86 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKS---LLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSV 86 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTS---CEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCC---eEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCC
Confidence 3457889889999999987 44 467777543 246778888874 56665553 235678889999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCC-------CeeecChhhHHHh
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP-------LSVPINQDTLNLL 142 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~P-------lv~~~t~~~~~~~ 142 (323)
|++++|+++ .....+.| .+.++|.+||.+..-. .+..++..++..+
T Consensus 87 Pt~~~~~~G-~~~~~~~G-~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~ 139 (153)
T 2wz9_A 87 PTFLFFKNS-QKIDRLDG-AHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSV 139 (153)
T ss_dssp SEEEEEETT-EEEEEEES-SCHHHHHHHHHHHSCTTSSCSCCCCCCC--------
T ss_pred CEEEEEECC-EEEEEEeC-CCHHHHHHHHHHHhccccCCCccccccCCCCChhhH
Confidence 999999842 12223456 4778899999887532 3444455554443
No 109
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.33 E-value=0.007 Score=47.80 Aligned_cols=120 Identities=11% Similarity=0.050 Sum_probs=77.5
Q ss_pred cCCCeeecChhhHHHhhcC---CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCC
Q 020623 127 FLPLSVPINQDTLNLLKDD---KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 203 (323)
Q Consensus 127 ~~Plv~~~t~~~~~~~~~~---~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~ 203 (323)
....+.+++.+++...... ++++++.|... .-..-..+...|.++|++++++.|+.+|.+... +.|++ ..
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~-wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i---~~ 80 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRS-SVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI---EHYHD---NC 80 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCT-TCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC---SSCCS---SC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECC-CChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCC---CC
Confidence 3456778888888875442 24666666542 123346677889999999988999999997653 67888 57
Q ss_pred CCeEEEEeCCcceeeccCCCCCC-CCCCHHHHHHHHHHHHcCcccccccCCCC
Q 020623 204 LPKMVVWDGNENYLTVIGSESID-EEDQGSQISRFLEGYREGRTEQKKVAGPS 255 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~~-~~~t~~~I~~Fi~~~~~Gkl~~~~kSeP~ 255 (323)
+|.++++...+......|...+. ..++.+.|.+|++.+ |-+.......|+
T Consensus 81 ~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~--~~i~~~~~~~~~ 131 (135)
T 2dbc_A 81 LPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV--GAIQSDLEENSG 131 (135)
T ss_dssp CSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH--TSSCCCSCCCSC
T ss_pred CCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc--CCccccccCCCC
Confidence 99999887432211112322221 146889999999986 455444433343
No 110
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.32 E-value=0.00091 Score=57.44 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=84.1
Q ss_pred CCc--ccccCCCCChHHHHHHHHHhcC--CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhh
Q 020623 2 HGI--PTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKY 69 (323)
Q Consensus 2 ~G~--~~eY~G~R~a~~Iv~~l~k~~~--p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~ 69 (323)
+|. ...|.|.+..+.+.+|+.+... .++..+ +.+.++.+...++. +++|-|... ...+.++|..+
T Consensus 87 ~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~--~~~v~F~a~wC~~C~~~~p~~~~l~~~~ 163 (226)
T 1a8l_A 87 DGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQD--VRILVFVTPTCPYCPLAVRMAHKFAIEN 163 (226)
T ss_dssp TTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSC--EEEEEEECSSCTTHHHHHHHHHHHHHHH
T ss_pred CCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCC--cEEEEEeCCCCCccHHHHHHHHHHHHhc
Confidence 454 3579999999999999988642 234445 45677666544442 226666542 24678888888
Q ss_pred c----CceeEEeecc-cchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 70 K----KKAWFAVAKD-FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 70 ~----~~~~F~~~~~-~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
. +.+.|...+. ...+++.+|++...|++++|+++ +....|.|..+.+.|.+||...
T Consensus 164 ~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 164 TKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred ccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 6 4676665532 35678889999999999999753 2334577988999999999865
No 111
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.32 E-value=0.0024 Score=47.45 Aligned_cols=94 Identities=20% Similarity=0.326 Sum_probs=66.3
Q ss_pred ceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..|++.+++++.+++ .+. +++|-|... ...+.+++..+...+.|...+ +...+++.++++...|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~--~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGK--LVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTS--EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCC--EEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 5678888999998874 322 567777543 246788888886677676553 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++ .....+.| .+.+.|.+||.+.
T Consensus 80 ~~~~G-~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 80 FLKNG-VKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEETT-EEEEEEES-CCHHHHHHHHHHT
T ss_pred EEcCC-cEEEEEcC-CCHHHHHHHHHHh
Confidence 99742 12224567 6888899999764
No 112
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.32 E-value=0.0029 Score=49.87 Aligned_cols=98 Identities=8% Similarity=0.185 Sum_probs=70.7
Q ss_pred ChhhHHHhhc----CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEE
Q 020623 135 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 210 (323)
Q Consensus 135 t~~~~~~~~~----~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~ 210 (323)
+.+++..... .++++++.|... .=..-..+...|.+++++++++.|+.+|.+....+++.||+ ...|.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~k~vvv~f~a~-wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 106 (139)
T 3d22_A 31 TKERWDQKLSEASRDGKIVLANFSAR-WCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEI---KATPTFFFL 106 (139)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CEESEEEEE
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCC---CcccEEEEE
Confidence 4566665432 357777777753 22334567788999999998899999999988888999999 578999887
Q ss_pred eCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 211 DGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 211 ~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
. +++ +.. . + .+.+.|.+|++.++.+.
T Consensus 107 ~-~G~~~~~~-~------G-~~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 107 R-DGQQVDKL-V------G-ANKPELHKKITAILDSL 134 (139)
T ss_dssp E-TTEEEEEE-E------S-CCHHHHHHHHHHHHHTS
T ss_pred c-CCeEEEEE-e------C-CCHHHHHHHHHHHhccC
Confidence 4 442 222 1 2 26789999999998764
No 113
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.32 E-value=0.0025 Score=49.52 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=68.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..++ .++++..+...+. +++|-|... ...+.+++.++.+.+.|...+ +...+++.++++...|+++
T Consensus 18 ~v~~l~-~~~f~~~~~~~~~--~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 18 DVIELT-PSNFNREVIQSDG--LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp SSEECC-TTTHHHHTTTCSS--CEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CcEECC-HHHHHHHHhcCCC--eEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 477785 5788775543332 567777542 247888999888767776553 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
+|+++......|.|..+.+.|.+||.+..
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 99873222445779889999999998753
No 114
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.31 E-value=0.0015 Score=50.12 Aligned_cols=100 Identities=13% Similarity=0.204 Sum_probs=68.5
Q ss_pred CeeecCh-hhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 130 LSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 130 lv~~~t~-~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
.+.+++. +++..+...++++++.|... .=..-..+...|.+++++++++.|+.+|.+..+.+++.||+ ...|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~-wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 88 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYAT-WCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEV---TAMPTFV 88 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECT-TCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSBSEEE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC---CcccEEE
Confidence 3445554 55666666677877777653 11234566778899999998899999999888888899999 5799998
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
+....+......| .. .+.|.+||++
T Consensus 89 ~~~~G~~~~~~~G------~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQLIGKIIG------AN-PTALEKGIKD 113 (114)
T ss_dssp EEETTEEEEEEES------SC-HHHHHHHHHT
T ss_pred EEeCCeEEEEEeC------CC-HHHHHHHHHh
Confidence 8743322111122 23 7888888864
No 115
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.31 E-value=0.0018 Score=51.03 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=73.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCc---eeEEeecc-cchhhHhhcCCCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKK---AWFAVAKD-FSEDTMVLYDFDKVP 95 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~---~~F~~~~~-~~~~~~~~~~~~~~p 95 (323)
.+..+ +.++++.++..++ +++|-|... ...+.+++.++.+. +.|..++. ...+++.+|++...|
T Consensus 18 ~v~~l-~~~~~~~~~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 18 GVWVL-NDGNFDNFVADKD---TVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp TEEEC-CTTTHHHHHTTCS---EEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCEEc-ChHhHHHHHhcCC---eEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 46778 5688998887765 467777542 24678888888764 66766532 246788899998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeee
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVP 133 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~ 133 (323)
++++|+++ +...|.|..+.+.|.+||....-|.+..
T Consensus 94 t~~~~~~G--~~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILKKG--QAVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEETT--EEEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEECC--cEEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 99999753 3445778889999999999987665543
No 116
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.30 E-value=0.0014 Score=50.14 Aligned_cols=103 Identities=11% Similarity=0.153 Sum_probs=73.1
Q ss_pred CCeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC------CeEEEEEcCcchhhHhhhcCCcCC
Q 020623 129 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR------ELVFCYVGIKQFADFADTFEANKK 201 (323)
Q Consensus 129 Plv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~------~l~F~~vd~~~~~~~~~~~gl~~~ 201 (323)
+.+..++.+++.... ..++++++.|...- =..-..+...|.++|++++ ++.|+.+|.+..+ +.+ ++
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v--- 79 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPW-CGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EI--- 79 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSS-CTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CC---
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCC-CHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--cc---
Confidence 457888999998764 56678887777531 1234567778888998875 3999999997543 334 77
Q ss_pred CCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 202 SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 202 ~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
...|.+++++.+++ .... .+..+.+.|.+||+..+..
T Consensus 80 ~~~Pt~~~~~~~~~~~~~~~------~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 80 QGFPTIKLYPAGAKGQPVTY------SGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSSSEEEEECSSCTTSCCCC------CCCSCHHHHHHHHHHTSSS
T ss_pred CcCCeEEEEeCcCCCCceEe------cCCCCHHHHHHHHHhccCc
Confidence 57899999987643 2222 3457889999999987653
No 117
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.26 E-value=0.0014 Score=52.71 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=61.0
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecC-C---------hhHHHHHHHhhcCcee--EEeec-ccchhhHhhcCCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGL-D---------ESVMSNLALKYKKKAW--FAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~-~---------~~~f~~~A~~~~~~~~--F~~~~-~~~~~~~~~~~~~~~ 94 (323)
.+..+++ +++++++..++. ++|-|.. . ...+.++|.++ +++. |+.++ +...+++.+|++...
T Consensus 18 ~~~~l~~-~~f~~~i~~~~~---~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~i 92 (142)
T 2es7_A 18 GWQPVEA-STVDDWIKRVGD---GVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRF 92 (142)
T ss_dssp TCEECCC-C--------CCS---EEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSS
T ss_pred cCccccc-ccHHHHHHhCCC---EEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcC
Confidence 6778865 889999987764 4454432 1 24788999998 6777 76553 224578889999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecC
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN 135 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t 135 (323)
|++++|+++ .....+.|..+.+.|.+||....-+.....+
T Consensus 93 PT~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 93 PATLVFTDG-KLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp SEEEEESCC-----CEESCCCHHHHHHHHHHHHC-------
T ss_pred CeEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999753 2233567888899999999987765555444
No 118
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.25 E-value=0.00028 Score=55.20 Aligned_cols=102 Identities=14% Similarity=0.206 Sum_probs=66.8
Q ss_pred CeeecChhhHHH-hhcCCCcEEEEEEeCCChh--------------HHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHh
Q 020623 130 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEE--------------KSQKLVTTLKAAASANRE-LVFCYVGIKQFADFA 193 (323)
Q Consensus 130 lv~~~t~~~~~~-~~~~~~~~v~~f~~~~~~e--------------~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~ 193 (323)
-+..++.+++.. +...++++++.|...-- . .-..+...+.++++++++ +.|+.+|.+..+.++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC-~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWC-GPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSC-SCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCC-ccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 366788899974 45667788777765311 1 223445577888888886 999999999887888
Q ss_pred hhcCCcCCCCCCeEEEEeCCccee-eccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 194 DTFEANKKSKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 194 ~~~gl~~~~~~P~ivI~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+.||+ ...|.++++ .+++.. .. .+..+.+.|.+|++..+
T Consensus 83 ~~~~v---~~~Pt~~~~-~~G~~~~~~------~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGI---RGIPTLLLF-KNGEVAATK------VGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTC---CBSSEEEEE-ESSSEEEEE------ESCCCHHHHHHHHTTTC
T ss_pred HHcCC---CccCEEEEE-ECCEEEEEE------eCCCCHHHHHHHHHHHh
Confidence 99999 579999988 444321 12 23467889999987643
No 119
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.25 E-value=0.0028 Score=48.06 Aligned_cols=99 Identities=13% Similarity=0.146 Sum_probs=69.8
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC---ceeEEeecc-cchhhHhhcCCCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK---KAWFAVAKD-FSEDTMVLYDFDKVP 95 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~---~~~F~~~~~-~~~~~~~~~~~~~~p 95 (323)
.+..+ +.+++++.++.++ +++|-|... ...+.+++..+.. .+.|...+. ...+++.++++...|
T Consensus 8 ~v~~l-~~~~~~~~~~~~~---~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 83 (120)
T 1mek_A 8 HVLVL-RKSNFAEALAAHK---YLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYP 83 (120)
T ss_dssp TEEEC-CTTTHHHHHHHCS---EEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSS
T ss_pred CcEEe-chhhHHHHHccCC---eEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCccc
Confidence 46777 4688888887766 467766542 3578888888763 456655532 245678899998999
Q ss_pred eEEEecCCCC-CCccccCCCCHHHHHHHHHhhcCCC
Q 020623 96 ALVALQPSYN-EHNIFYGPFDEEFLEEFIKQNFLPL 130 (323)
Q Consensus 96 ~ivv~k~~~~-~~~~y~g~~~~~~L~~fI~~~~~Pl 130 (323)
++++|+++.. ....|.|..+.+.|.+||.+..-|.
T Consensus 84 t~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 9999975311 1245778889999999999876554
No 120
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.24 E-value=0.0014 Score=52.88 Aligned_cols=103 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCCh---hHHHHHHHHHHHHHHhCCC--eEEEEEcCcchhhHhhhcCCcCCCCC
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETE---EKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKL 204 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~---e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~~~~~~~gl~~~~~~ 204 (323)
-+..+|.++|.....++.|+++.|.. +. ..-+.+...|.++|++|.+ +.|+.+|.++.+.++..||+ ...
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a--~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV---~sI 92 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSS--DPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGA---FRF 92 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECC--CTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTC---CSS
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeC--CcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCC---ccC
Confidence 34588999998876666787776654 22 1112466789999999975 99999999988899999999 589
Q ss_pred CeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 205 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 205 P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
|.++++...+.-... .+-.+.+.|.++|+.+++
T Consensus 93 PTlilFk~G~~v~~~------~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 93 PATLVFTGGNYRGVL------NGIHPWAELINLMRGLVE 125 (140)
T ss_dssp SEEEEEETTEEEEEE------ESCCCHHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEE------ecCCCHHHHHHHHHHHhc
Confidence 999998754321111 234677899999999884
No 121
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.23 E-value=0.0017 Score=49.26 Aligned_cols=96 Identities=19% Similarity=0.236 Sum_probs=68.4
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
++..++ .+++++.+ .++ +++|-|... ...+.+++.++.+.+.|...+ +.+.+++.++++...|+++
T Consensus 2 ~v~~l~-~~~~~~~~-~~~---~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 76 (112)
T 2voc_A 2 AIVKAT-DQSFSAET-SEG---VVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLL 76 (112)
T ss_dssp CCEECC-TTTHHHHH-SSS---EEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEE
T ss_pred CeEEec-HHHHHHHh-CCC---EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 466774 58888878 444 567776542 246788898887777676553 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhhcCC
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 129 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~~~P 129 (323)
+|+++ .....+.|..+.+.|.+||..+.-|
T Consensus 77 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 77 VLKDG-EVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EEeCC-EEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 99542 1223467988999999999987655
No 122
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.23 E-value=0.0021 Score=48.16 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=66.7
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC---ceeEEeec-ccchhhHhhcCCCCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK---KAWFAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~---~~~F~~~~-~~~~~~~~~~~~~~~ 94 (323)
..+..+ +.+++++.+. ++ +++|-|... ...+.+++.++.. .+.|...+ +...+++.++++...
T Consensus 5 ~~v~~l-~~~~~~~~~~-~~---~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 79 (111)
T 3uvt_A 5 STVLAL-TENNFDDTIA-EG---ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGY 79 (111)
T ss_dssp CCSEEC-CTTTHHHHHH-SS---EEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceEc-ChhhHHHHhc-CC---cEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcc
Confidence 346777 5688999888 44 467776543 2467778877642 45665553 235678889999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
|++++|+++ .....+.|..+.+.|.+||++++
T Consensus 80 Pt~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~a 111 (111)
T 3uvt_A 80 PTLLLFRGG-KKVSEHSGGRDLDSLHRFVLSQA 111 (111)
T ss_dssp SEEEEEETT-EEEEEECSCCSHHHHHHHHHHHC
T ss_pred cEEEEEeCC-cEEEeccCCcCHHHHHHHHHhcC
Confidence 999999752 22235678889999999998763
No 123
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.21 E-value=0.0019 Score=47.94 Aligned_cols=95 Identities=21% Similarity=0.300 Sum_probs=68.4
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCe
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPA 96 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ 96 (323)
..++..+ +.+++++.+ .++ +++|-|+.. ...+.+++.++.+.+.|...+ +.+.+++.++++...|+
T Consensus 2 ~~~v~~l-~~~~~~~~~-~~~---~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt 76 (106)
T 3die_A 2 HMAIVKV-TDADFDSKV-ESG---VQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPT 76 (106)
T ss_dssp CCCCEEC-CTTTHHHHS-CSS---EEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSE
T ss_pred CcceEEC-CHHHHHHHh-cCC---cEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCE
Confidence 3567788 568888888 444 567777543 246788899988777676553 24667888999999999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++++ .....+.|..+.+.|.+||.+.
T Consensus 77 ~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 77 LIVFKDG-QPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred EEEEeCC-eEEEEEeCCCCHHHHHHHHHHh
Confidence 9999742 2223466888899999999864
No 124
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.20 E-value=0.0014 Score=58.45 Aligned_cols=108 Identities=11% Similarity=0.178 Sum_probs=78.6
Q ss_pred cCCCeeecChhhHHHhhcC--CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCC
Q 020623 127 FLPLSVPINQDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSK 203 (323)
Q Consensus 127 ~~Plv~~~t~~~~~~~~~~--~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~ 203 (323)
..+.|..+|.+++..+... ++++++.|...- =..-..+...+.++++++++ +.|+.+|++..+.+++.||+ ..
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 80 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSER-SQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGL---RA 80 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTT-CTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTC---CS
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCC-ChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCC---CC
Confidence 3567999999999987753 678877777521 11123455678899999988 99999999988888999999 57
Q ss_pred CCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 204 LPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.|.++++...+.-... .+..+.+.+.+|+.....+
T Consensus 81 ~Pt~~~~~~G~~~~~~------~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 81 IPTVYLFQNGQPVDGF------QGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp SSEEEEEETTEEEEEE------ESCCCHHHHHHHHHHHSCC
T ss_pred CCeEEEEECCEEEEEe------eCCCCHHHHHHHHHHHcCC
Confidence 9999988543221111 2346788999999987643
No 125
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.19 E-value=0.0031 Score=48.33 Aligned_cols=95 Identities=17% Similarity=0.281 Sum_probs=66.6
Q ss_pred CCCceecCChHHHHHHHH--hcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCC
Q 020623 26 APDVSILNSDAEVSDFVE--NAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~--~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~ 94 (323)
.++.....+.++++++++ .++ +++|-|... ...+.+++.++.+ +.|..++ +...+++.+|++...
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~ 85 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDK---LVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSM 85 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTS---CEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSS
T ss_pred CCcccCCCCHHHHHHHHHhcCCC---EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccc
Confidence 344566678999999998 444 577777543 2467788888875 6665543 235678889999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|++++|+++ .....+.|. +.+.|.+||.+.
T Consensus 86 Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 86 PTFQFFKKG-QKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SEEEEESSS-SEEEEEESC-CHHHHHHHHHHH
T ss_pred cEEEEEeCC-eEEEEEcCC-CHHHHHHHHHHh
Confidence 999999642 222245687 899999999864
No 126
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.19 E-value=0.0039 Score=54.41 Aligned_cols=119 Identities=12% Similarity=0.073 Sum_probs=76.4
Q ss_pred CcccccCCCCChHHHHHHHHHhcCCCce---------ecCChHHHHHHHHhcCCcccEEEEecCC-hhHHHHHHHhhc--
Q 020623 3 GIPTEYYGPRKAELLVRYLKKFVAPDVS---------ILNSDAEVSDFVENAGTFFPLFIGFGLD-ESVMSNLALKYK-- 70 (323)
Q Consensus 3 G~~~eY~G~R~a~~Iv~~l~k~~~p~v~---------~i~s~~~l~~fl~~~~~~~~~vVgf~~~-~~~f~~~A~~~~-- 70 (323)
|....|.| ++.+.|.+|+.+.+..... ...+.++++.|+..+... ++.+-|.+. .....+++..+.
T Consensus 105 g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~-~~al~f~~~~~~~~~~~~~d~~~~ 182 (244)
T 3q6o_A 105 GAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEE-YLALIFEXGGSYLAREVALDLSQH 182 (244)
T ss_dssp CEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCS-EEEEEEECTTCCHHHHHHHHTTTC
T ss_pred CeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCc-eEEEEEEECCcchHHHHHHHhccC
Confidence 44455666 8999999999988643321 233578899988765542 234445433 334556666665
Q ss_pred CceeEEeecccchhhHhhcCCCCCCeEEEecCCCCCCcccc-CCCCHHHHHHHHH
Q 020623 71 KKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFY-GPFDEEFLEEFIK 124 (323)
Q Consensus 71 ~~~~F~~~~~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~-g~~~~~~L~~fI~ 124 (323)
..+.+..+.+.+.+++.+|++.+.|+++++.+ ++....+. ...+.+.+..+++
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~-~g~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVTDFPSCYLLFR-NGSVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCCSSEEEEEET-TSCEEECCCSSSSHHHHHHHHH
T ss_pred CceEEEEEeCchHHHHHHcCCCCCCeEEEEeC-CCCeEeeccccccHHHHHHHHH
Confidence 33556555444578999999999999999886 34444444 3345667777764
No 127
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.18 E-value=0.004 Score=45.96 Aligned_cols=92 Identities=21% Similarity=0.353 Sum_probs=64.1
Q ss_pred ceecCChHHHHHHHHh--cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 29 VSILNSDAEVSDFVEN--AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~--~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
+..|++.+++++.+.+ +. +++|-|+.. ...+.+++.++. .+.|...+ +...+++.++++...|++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~---~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGR---LIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTF 76 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTS---CEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CeecCCHHHHHHHHHhcCCC---eEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEE
Confidence 4678888999998874 43 567766542 236778888775 56665543 235678889999899999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++++ .....+.| .+.+.|.+||.+.
T Consensus 77 ~~~~~g-~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 77 VFIKDG-KEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEEETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred EEEeCC-cEEEEEeC-CCHHHHHHHHHhh
Confidence 999742 12223557 5888999999864
No 128
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.17 E-value=0.0016 Score=50.32 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCc-eeEEeec-ccchhhHhhcCCCCCCe
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKK-AWFAVAK-DFSEDTMVLYDFDKVPA 96 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~-~~F~~~~-~~~~~~~~~~~~~~~p~ 96 (323)
..+..|+|.+++++.++.+. +++|-|+.. ...+.+++.++.+. +.|..++ +...+++.++++...|+
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k---~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDK---VVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSS---CEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred cceEEcCCHHHHHHHHcCCC---EEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccE
Confidence 35788999999999996555 467776542 23667778777654 6665543 23567888999989999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++|+++ .....+.|. +.+.|.+||.+.
T Consensus 92 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 92 FVFFKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9999642 222345687 889999999864
No 129
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.13 E-value=0.0012 Score=53.31 Aligned_cols=105 Identities=9% Similarity=0.126 Sum_probs=64.9
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCC-hhHHHHHHHHHHHHHHhCCCeE--EEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANRELV--FCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~-~e~~~~~~~~l~~~A~~~~~l~--F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
-+..++.+++..+.....+.++.|...-. -..-+.+...|.++|+++.++. |+.+|.+..+.++..||+ ..+|.
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V---~~iPT 94 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNV---RRFPA 94 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTC---CSSSE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCC---CcCCe
Confidence 56788889998877655555555542100 0112346678899999993388 999999987888889999 57999
Q ss_pred EEEEeCCccee-eccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 207 MVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 207 ivI~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++++. +|+.. .. .+..+.+.|.+|++.+++.
T Consensus 95 ~~~fk-~G~~v~~~------~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 95 TLVFT-DGKLRGAL------SGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp EEEES-CC----CE------ESCCCHHHHHHHHHHHHC-
T ss_pred EEEEe-CCEEEEEE------eCCCCHHHHHHHHHHHhcc
Confidence 99984 44211 11 2346788999999998864
No 130
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.12 E-value=0.0037 Score=46.45 Aligned_cols=94 Identities=13% Similarity=0.254 Sum_probs=66.6
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
+..++ .++++.+++.++ +++|-|... ...+.+++..+.+++.|...+ +.+.+++.++++...|++++
T Consensus 3 v~~l~-~~~~~~~~~~~~---~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 3 PIEVT-DQNFDETLGQHP---LVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CEECC-TTTHHHHHHHCS---EEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEcc-HhHHHHHhcCCC---eEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 45674 578888787766 467766543 246788888887667666553 23567888999989999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
|+++ .....+.|..+.+.|.+||.+..
T Consensus 79 ~~~g-~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 79 FKDG-QPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHTTC
T ss_pred EeCC-cEeeeEeCCCCHHHHHHHHHHHh
Confidence 9542 12224678888999999998653
No 131
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.11 E-value=0.0047 Score=46.73 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=65.9
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCe
Q 020623 26 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPA 96 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ 96 (323)
.|+.....+.+++++.++.++ +++|-|+.. ...+.+++.++. ++.|...+ +...+++.++++...|+
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~k---~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQNE---LVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp --CCEEECSHHHHHHHHHHCS---EEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred ceeEEEECCHHHHHHHHccCC---eEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 455566668899999998766 467776543 246778888876 46565543 23566888999989999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++++ .....+.|. +.+.|.+||...
T Consensus 83 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 83 FKVYKNG-SSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEETT-EEEEEEESC-CHHHHHHHHHTT
T ss_pred EEEEECC-cEEEEEeCC-CHHHHHHHHHHh
Confidence 9999742 122245687 899999999764
No 132
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.11 E-value=0.0036 Score=47.17 Aligned_cols=98 Identities=20% Similarity=0.260 Sum_probs=67.3
Q ss_pred cCCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 25 VAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 25 ~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
+...+..+ +.++++..+...+. +++|.|... ...+.+++..+.+.+.|...+ +...+++.++++...|
T Consensus 5 ~~~~v~~l-~~~~~~~~~~~~~~--~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~P 81 (115)
T 1thx_A 5 MSKGVITI-TDAEFESEVLKAEQ--PVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVP 81 (115)
T ss_dssp -CCSEEEC-CGGGHHHHTTTCSS--CEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSS
T ss_pred ccCceEEe-eccchhhHhhcCCc--eEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCcee
Confidence 34558888 56888876533332 467777542 246788898887667776553 2356788899998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++|+++ .....+.|..+.+.|.+||.+.
T Consensus 82 t~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 82 ALRLVKGE-QILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEEcCC-EEEEEecCCCCHHHHHHHHHHH
Confidence 99999542 1222466888899999999865
No 133
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.09 E-value=0.0043 Score=48.39 Aligned_cols=92 Identities=13% Similarity=0.149 Sum_probs=65.9
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
+..|++.+++++.++.+. +++|-|... ...+.+++..+. ++.|..++ +...+++.+|++...|++++
T Consensus 21 v~~l~~~~~f~~~~~~~k---~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDI---LTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSS---CEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHHccCC---EEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 788988899999886655 467777543 246788888874 56665553 23567888999999999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|+++ .....+.| .+.+.|.+||...
T Consensus 97 ~~~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 97 ARSG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp EETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred EeCC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 9642 12224567 5788999999764
No 134
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.07 E-value=0.003 Score=49.00 Aligned_cols=103 Identities=10% Similarity=0.147 Sum_probs=71.1
Q ss_pred CCCeeecChhhHHHhhcC--CCcEEEEEEeCC------ChhHHHHHHHHHHHHHHhCCC-eEEEEEcC-------cchhh
Q 020623 128 LPLSVPINQDTLNLLKDD--KRKIVLAIVEDE------TEEKSQKLVTTLKAAASANRE-LVFCYVGI-------KQFAD 191 (323)
Q Consensus 128 ~Plv~~~t~~~~~~~~~~--~~~~v~~f~~~~------~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~-------~~~~~ 191 (323)
++.+...+.+++...... ++++++.|.... -=..-..+...|.++++++++ +.|+.+|. +....
T Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~ 83 (123)
T 1wou_A 4 YEEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNND 83 (123)
T ss_dssp CEEEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCH
T ss_pred ceeEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHH
Confidence 345666777888776554 678877777630 012235677889999999986 99999999 55566
Q ss_pred HhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 192 FADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 192 ~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
+.+.|++ ...|.+++++..++..-. ...+.+.|.+|+++
T Consensus 84 ~~~~~~i---~~~Pt~~~~~~~~~~~g~-------~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKV---TAVPTLLKYGTPQKLVES-------ECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCC---CSSSEEEETTSSCEEEGG-------GGGCHHHHHHHHHC
T ss_pred HHHHCCC---CeeCEEEEEcCCceEecc-------ccCCHHHHHHHHhc
Confidence 7788999 579999998764333211 12467889988863
No 135
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.07 E-value=0.0053 Score=48.40 Aligned_cols=104 Identities=11% Similarity=-0.003 Sum_probs=73.1
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcC---------cchhhHhhhcCCcC
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------KQFADFADTFEANK 200 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~---------~~~~~~~~~~gl~~ 200 (323)
.+.+++.+++...... ++++.|... .=..-..+...|.+++++++ +.|+.+|. +..+.+++.||+
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v-- 90 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSK-TCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGV-- 90 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEET-TCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTC--
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECC-cCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCC--
Confidence 3667788888877655 777777663 12334567788999999998 99999998 666678889999
Q ss_pred CCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcc
Q 020623 201 KSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 201 ~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
...|.+++++..+..... .+..+.+.+.++++..+++.-
T Consensus 91 -~~~Pt~~~~~~G~~v~~~------~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 91 -EGTPTLVFYKEGRIVDKL------VGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp -CSSSEEEEEETTEEEEEE------ESCCCHHHHHHHHHHHC----
T ss_pred -ceeCeEEEEcCCEEEEEE------eCCCCHHHHHHHHHHHhCCCc
Confidence 579999998843322222 234678999999999987643
No 136
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.05 E-value=0.0034 Score=50.18 Aligned_cols=95 Identities=9% Similarity=0.259 Sum_probs=69.2
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..++ .++++..+..++ +++|-|... ...+.+++..+.+++.|..++ +...+++.+|++...|+++
T Consensus 39 ~v~~l~-~~~~~~~~~~~k---~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 39 EVINAT-AETLDKLLQDDL---PMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIM 114 (148)
T ss_dssp CCEECC-TTTHHHHTTCSS---CEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CceecC-HHHHHHHHhcCC---cEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEE
Confidence 466774 588888885555 577777543 247788999987777776553 3466788899999999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
+|+++ .....|.|..+.+.|.+||.+..
T Consensus 115 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 115 LYRNG-KMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp EEETT-EEEEEESSCCCHHHHHHHHHHHH
T ss_pred EEECC-eEEEEEeCCCCHHHHHHHHHHHh
Confidence 99742 22234678889999999998753
No 137
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.04 E-value=0.0043 Score=54.57 Aligned_cols=103 Identities=15% Similarity=0.251 Sum_probs=72.9
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---CeEEEEEcCc-----chhhHhhhcCCcC
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIK-----QFADFADTFEANK 200 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~-----~~~~~~~~~gl~~ 200 (323)
..|..+|..||..+...++++++.|+.....= . +...+.++|+.+. ++.|+.+|++ ..+.+++.||+ .
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWC--g-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V-~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYG--E-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL-D 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCS--H-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC-C
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCC--c-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC-C
Confidence 45788999999987766677766665400111 1 6778889999875 3999999954 36788999999 3
Q ss_pred CCCCCeEEEEeCCc--ceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 201 KSKLPKMVVWDGNE--NYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 201 ~~~~P~ivI~~~~~--kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
...+|.++++.... ..... .+..+.+.|.+||+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y------~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPY------TGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEEC------CSCSCHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCcCcceee------cCCCCHHHHHHHHHHh
Confidence 22899999886532 11122 2456889999999987
No 138
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.04 E-value=0.0036 Score=47.89 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=66.3
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..+++.+.+++.++.++ +++|-|... ...+.+++.++.+ +.|...+ +...+++.++++...|+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k---~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQND---KLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCS---EEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred heeecCCHHHHHHHHhCCC---EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 3678899999999988776 467777542 2467888888875 6665543 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~ 125 (323)
+++++ .....+.|.. .+.|.+||++
T Consensus 89 ~~~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred EEeCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 98642 1222466876 8899999975
No 139
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.04 E-value=0.0041 Score=46.17 Aligned_cols=95 Identities=14% Similarity=0.235 Sum_probs=65.1
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..++ .++++..+...+. +++|-|... ...+.+++.++.+++.|...+ +...+++.++++...|+++
T Consensus 3 ~v~~l~-~~~~~~~~~~~~~--~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 3 HTLAVS-DSSFDQDVLKASG--LVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CEEECC-TTTHHHHTTTCSS--EEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred ceeecc-hhhhhHHHHhCCC--EEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 466774 5777765533332 567777543 236778888887777776653 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+|+++ .....+.|..+.+.|.+||.+.
T Consensus 80 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDG-KVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHT
T ss_pred EEeCC-EEEEEecCCCCHHHHHHHHHhc
Confidence 99542 1222466888899999999875
No 140
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.02 E-value=0.0054 Score=45.83 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=64.6
Q ss_pred CceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 28 DVSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
++..|.+.+++++.+.+ .+. +++|-|... ...+.+++.++. ++.|...+ +...+++.++++...|++
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~--~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSR--LAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTS--CEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred ceEEecCHHHHHHHHHhCCCC--EEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEE
Confidence 46788899999998854 222 567777543 246788888884 56665553 235678889999899999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++|+++ .....+.|. ..++|.+||.+.
T Consensus 79 ~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 79 QFFRNK-VRIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp EEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 999752 222245674 455699999864
No 141
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.99 E-value=0.0029 Score=50.74 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=70.6
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC----------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD----------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~----------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
...|+ .+++++++...+. +++|-|..+ ...+.++|.+|.+.+.|+.++ +-+++++.+|++...|++
T Consensus 17 ~~~vt-~~~F~~~v~~~~~--~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 17 PTLVD-EATVDDFIAHSGK--IVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp CEEEC-TTTHHHHHHTSSS--EEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred CcccC-HhHHHHHHhcCCC--cEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 34674 5889888876653 578877541 247889999998888887764 346778899999999999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
++||++ +......|....+.|.+||..+.
T Consensus 94 ilFkdG-~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPE-RTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECC-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECC-EEEEEEeCCCCHHHHHHHHHHHh
Confidence 999963 22223458778889999998664
No 142
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=96.98 E-value=0.0084 Score=47.17 Aligned_cols=98 Identities=16% Similarity=0.300 Sum_probs=69.5
Q ss_pred CCCceecCChHHHHHHHHh-----------cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhh
Q 020623 26 APDVSILNSDAEVSDFVEN-----------AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDT 85 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~-----------~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~ 85 (323)
.+.+..+ +.++++..+.+ .+. +++|-|... ...+.+++..+.+.+.|..++ +...++
T Consensus 21 ~~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k--~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 21 QSGTIHL-TRAEFLKKIADYENHSKEWKYLGDK--PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97 (141)
T ss_dssp --CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSS--CEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred CCCcccc-cHHHHHHHhhccccchhHHHHhCCC--EEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHH
Confidence 3457778 57888877765 122 577777542 247788999988777665553 235678
Q ss_pred HhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 86 MVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 86 ~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
+.+|++...|++++|.+ .+....+.|..+.+.|.+||....
T Consensus 98 ~~~~~v~~~Pt~~~~~~-~g~~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPM-KGEPQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHHTTCCSSSEEEEECS-SSCCEEEESCCCHHHHHHHHHHTT
T ss_pred HHHcCCCCcCEEEEEeC-CCCEEEEeCCCCHHHHHHHHHHHH
Confidence 89999999999999965 233346679889999999998753
No 143
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.98 E-value=0.0074 Score=44.86 Aligned_cols=95 Identities=15% Similarity=0.300 Sum_probs=65.5
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+|..+ +.+++++.+...+. +++|-|... ...+.+++.++.+.+.|...+ +.+.+++.++++...|+++
T Consensus 2 ~v~~l-~~~~~~~~~~~~~~--~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (107)
T 1dby_A 2 EAGAV-NDDTFKNVVLESSV--PVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIM 78 (107)
T ss_dssp CCEEE-CHHHHHHHTTTCSS--CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEE
T ss_pred ccEec-cHHHHHHHHhcCCC--cEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEE
Confidence 45667 46788776644433 567777543 246778888887767666553 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++ .....+.|..+.+.|.+||.+.
T Consensus 79 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 79 VFKGG-KKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp EESSS-SEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 99642 1222456888889999999864
No 144
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.98 E-value=0.0064 Score=44.60 Aligned_cols=92 Identities=18% Similarity=0.266 Sum_probs=64.4
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
|..+ +.+++++.++.++ +++|-|... ...+.+++..+.+ +.|...+ +...+++.++++...|++++
T Consensus 1 V~~l-~~~~~~~~~~~~~---~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 75 (104)
T 2e0q_A 1 VIHL-DSKNFDSFLASHE---IAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIF 75 (104)
T ss_dssp CEEC-CTTTHHHHHHHSS---EEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred Ceec-CHHHHHHHHhcCC---cEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEE
Confidence 3456 4578888887666 467776543 2367788888876 6665553 23567888999988999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++ .....+.|..+.+.|.+||.+.
T Consensus 76 ~~~g-~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 76 FKDG-EPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EECC-eEhhhccCCCCHHHHHHHHHHH
Confidence 9642 1223466888899999999865
No 145
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.98 E-value=0.0064 Score=46.60 Aligned_cols=96 Identities=24% Similarity=0.364 Sum_probs=65.7
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+.....+.+++++.+.+.+. +++|-|+.. ...+.+++.++.+++.|...+ +...+++.++++...|+++
T Consensus 13 ~~~~~~~~~~f~~~v~~~~k--~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNSET--PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp SEEECCSHHHHHHHTTTCSS--CEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred eEEEecChhhHHHHHHcCCC--cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 34445578888876544432 567777543 236778888887677666553 2356788899999999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+|+++ .....+.|..+.+.|.+||.+.
T Consensus 91 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 91 AMKNG-DVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 99642 1222466888899999999764
No 146
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.93 E-value=0.0046 Score=47.26 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=69.5
Q ss_pred cCCCeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCc----chhhHhhhcCCcCC
Q 020623 127 FLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK----QFADFADTFEANKK 201 (323)
Q Consensus 127 ~~Plv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~----~~~~~~~~~gl~~~ 201 (323)
.+..+..++.+++......++++++.|... .=..-..+...|.+++++++. +.++-++.. ....+++.||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~-wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i--- 85 (118)
T 1zma_A 10 NIKDLEVTTVVRAQEALDKKETATFFIGRK-TCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI--- 85 (118)
T ss_dssp HTTTSEECCHHHHHHHHHTTCCEEEEEECT-TCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC---
T ss_pred HHhhhhcCCHHHHHHHHhCCCeEEEEEECC-CCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC---
Confidence 445677889999988777778887777653 113345677788889988875 766644432 23456788999
Q ss_pred CCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHH
Q 020623 202 SKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 239 (323)
Q Consensus 202 ~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~ 239 (323)
...|.++++...+..... .+..+.+.|.+|++
T Consensus 86 ~~~Pt~~~~~~G~~~~~~------~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQINVRC------DSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEEEEEC------CTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEEEEEe------cCCCCHHHHHHHhh
Confidence 578999988643322222 34567889999875
No 147
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.93 E-value=0.0052 Score=47.73 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=67.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhc----CceeEEeecc-cchhhHhhcCCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYK----KKAWFAVAKD-FSEDTMVLYDFDKV 94 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~----~~~~F~~~~~-~~~~~~~~~~~~~~ 94 (323)
.+..++ .+++++.+...+. +++|-|... ...+.+++.++. +.+.|+.++. ...+++.++++...
T Consensus 8 ~v~~l~-~~~~~~~~~~~~~--~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 8 DVIELT-DDSFDKNVLDSED--VWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCEECC-TTHHHHHTTTSSS--EEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred cCEEcC-HhhHHHHHhcCCC--eEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 467785 5788876644332 567777543 246778888886 5677766532 35678889999899
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
|++++|+++ .....|.|..+.+.|.+||.+..
T Consensus 85 Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 85 PTIKIFQKG-ESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp SEEEEEETT-EEEEEECSCCSHHHHHHHHHHHH
T ss_pred CeEEEEeCC-CceEEecCCCCHHHHHHHHHHHh
Confidence 999999862 22335678889999999998653
No 148
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.90 E-value=0.0053 Score=49.87 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=67.8
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
+..+ +.+++++.++.+. +++|-|... ...|.+++.++.+.+.|..++ +...+++.+|++...|++++
T Consensus 49 ~~~l-~~~~f~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 49 VAGI-DPAILARAERDDL---PLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp EEEC-CHHHHHHHTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CccC-CHHHHHHHHhCCC---cEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 5667 4688888774444 567777543 247888999988777776653 23567888999999999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
|+++ .....+.|..+.+.|.+||.+..
T Consensus 125 ~~~G-~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 125 FHKG-RELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EeCC-eEEEEecCCCCHHHHHHHHHHHh
Confidence 9642 22234678888999999998754
No 149
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.87 E-value=0.007 Score=45.07 Aligned_cols=95 Identities=20% Similarity=0.308 Sum_probs=65.0
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.|..++ .++++..+...+. +++|-|... ...+.+++.++.+.+.|...+ +...+++.++++...|+++
T Consensus 3 ~v~~l~-~~~f~~~~~~~~~--~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 3 KIIHLT-DDSFDTDVLKADG--AILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TEEECC-TTTHHHHTTTCSS--EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred cceecc-hhhHHHHHHhcCC--eEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 466774 5777755433332 567777543 246788898887777776653 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+|+++ .....+.|..+.+.|.+||.+.
T Consensus 80 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 80 LFKNG-EVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-EEEEEEecCCCHHHHHHHHHHh
Confidence 99542 1222466888899999999864
No 150
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.87 E-value=0.0049 Score=48.88 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=68.8
Q ss_pred CCCceecCChHHHH-HHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 26 APDVSILNSDAEVS-DFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 26 ~p~v~~i~s~~~l~-~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
...+..+ +.++++ .+++.++ +++|-|... ...+.+++.++.+.+.|..++ +...+++.++++...|
T Consensus 5 ~~~v~~l-~~~~f~~~~~~~~~---~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 80 (140)
T 3hz4_A 5 GSSIIEF-EDMTWSQQVEDSKK---PVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTP 80 (140)
T ss_dssp TTTEEEE-CHHHHHHHTTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEES
T ss_pred CcceEEc-chHhHHHHHHhCCC---cEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCC
Confidence 4567888 467787 4444444 567777543 247788999988777776653 2366788899998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
++++|+++ .....|.|..+.+.|.+||....
T Consensus 81 t~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 81 TFKFFCHG-RPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp EEEEEETT-EEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEEEEeCC-cEEEEEcCCCCHHHHHHHHHHHh
Confidence 99999642 12234678888999999998664
No 151
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.84 E-value=0.013 Score=47.19 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=73.0
Q ss_pred ChhhHHHhh--cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEe
Q 020623 135 NQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 211 (323)
Q Consensus 135 t~~~~~~~~--~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~ 211 (323)
+.+++.... ..++++++-|... -=..-..+...|.++++++++ +.|+.+|.+..+.+++.|++ ...|.+++..
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~-WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~~ 85 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRD-EDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDI---SYIPSTVFFF 85 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECT-TSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTC---CSSSEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCC---CccCeEEEEE
Confidence 456777654 4567777777652 113345677889999999998 99999999988888999999 5789998655
Q ss_pred CCcce-e-eccCC-CCCCC-CCCHHHHHHHHHHHHcCc
Q 020623 212 GNENY-L-TVIGS-ESIDE-EDQGSQISRFLEGYREGR 245 (323)
Q Consensus 212 ~~~kY-~-~~~~~-~~~~~-~~t~~~I~~Fi~~~~~Gk 245 (323)
..+.. . +..+. ..+.+ ..+.+.|.++++.+..|.
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 43221 0 10010 01123 467899999999987664
No 152
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.83 E-value=0.0049 Score=45.71 Aligned_cols=93 Identities=19% Similarity=0.276 Sum_probs=64.7
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
+..++ .++++..++.++ +++|-|... ...+.+++.++.+.+.|...+ +.+.+++.++++...|++++
T Consensus 2 v~~l~-~~~~~~~~~~~~---~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 77 (105)
T 1nsw_A 2 TMTLT-DANFQQAIQGDG---PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLIL 77 (105)
T ss_dssp CEEEC-TTTHHHHHSSSS---CEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceecc-HHhHHHHHhCCC---cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEE
Confidence 56674 477887776665 467776543 246778888887767666553 23567888999989999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++ .....+.|..+.+.|.+||.+.
T Consensus 78 ~~~G-~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 78 FKGG-RPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHTTTT
T ss_pred EeCC-eEEEEEecCCCHHHHHHHHHHH
Confidence 9542 1222466888889999998754
No 153
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.82 E-value=0.013 Score=45.44 Aligned_cols=94 Identities=14% Similarity=0.204 Sum_probs=65.3
Q ss_pred CceecCChHHHHHHHHh---cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 28 DVSILNSDAEVSDFVEN---AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~---~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
.+..|.|.+++++.+.. .+. +++|-|... ...+.+++.++. ++.|...+ +...+++.+|++...|
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k--~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~P 93 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKT--LVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAMP 93 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTC--EEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cEEEeCCHHHHHHHHHHhhhcCC--EEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCccC
Confidence 47889899999988875 232 567777543 246778888876 56555442 2356788899999999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++++++ .....+.| .+.+.|.+||.+.
T Consensus 94 t~~~~~~G-~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 94 TFMFLKEG-KILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp EEEEEETT-EEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEEeC-CCHHHHHHHHHHh
Confidence 99999642 11223557 4888999999764
No 154
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.86 E-value=0.00018 Score=53.48 Aligned_cols=100 Identities=5% Similarity=0.158 Sum_probs=67.6
Q ss_pred eeecChhhHHHh-hcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 131 SVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 131 v~~~t~~~~~~~-~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
+..++.+++... ...++++++.|... .-..-..+...++++++++++ +.|+.+|.+....+++.+|+ ...|.++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAP-WCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGI---RSIPTLL 78 (106)
Confidence 456777777643 45567777766642 112235566788899999886 99999999877778888999 4689998
Q ss_pred EEeCCccee-eccCCCCCCCCCCHHHHHHHHHHH
Q 020623 209 VWDGNENYL-TVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 209 I~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
+.. +++.. .. .+..+.+.+.+|++..
T Consensus 79 ~~~-~g~~~~~~------~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFK-NGQVVDRL------VGAQPKEALKERIDKH 105 (106)
Confidence 873 43211 11 2235667888888764
No 155
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.79 E-value=0.0087 Score=45.53 Aligned_cols=92 Identities=21% Similarity=0.345 Sum_probs=63.5
Q ss_pred ceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..+++.+++++.+++ .+. +++|-|... ...+.+++.++ ++.|...+ +...+++.++++...|+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~--~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNK--LVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTS--CEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEeCCHHHHHHHHHhCCCC--EEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEE
Confidence 7889888999998884 222 567777543 24677778776 45555442 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++ .....+.| .+.+.|.+||.+.
T Consensus 91 ~~~~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 91 AIKNG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred EEeCC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 99642 12223557 5788999999864
No 156
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.79 E-value=0.014 Score=44.01 Aligned_cols=96 Identities=17% Similarity=0.237 Sum_probs=66.4
Q ss_pred CCCceecCChHHHHHHHHh----cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCC
Q 020623 26 APDVSILNSDAEVSDFVEN----AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFD 92 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~----~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~ 92 (323)
+..+..|.+.+++++.+.. +. +++|-|... ...+.+++.++. ++.|...+ +...+++.++++.
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~---~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~ 80 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGK---LVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVE 80 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCceEEecCHHHHHHHHHhcccCCC---EEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCC
Confidence 4467889899999988875 33 467776543 246778888876 45555442 2356788899998
Q ss_pred CCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 93 KVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
..|++++++++ .....+.| .+.+.|.+||.+..
T Consensus 81 ~~Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 81 AMPTFLFIKDG-EKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp SBSEEEEEETT-EEEEEEES-CCHHHHHHHHHHHH
T ss_pred cCcEEEEEeCC-eEEEEecC-CCHHHHHHHHHHHh
Confidence 99999999642 11223457 47889999998754
No 157
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.79 E-value=0.0099 Score=48.72 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=74.0
Q ss_pred eeecC-hhhHHHh-h-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 131 SVPIN-QDTLNLL-K-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 131 v~~~t-~~~~~~~-~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
+..++ .+++... . .+++|+++-|...- -..=+.+...|.++|+++.+ +.|+.+|.++.+.++..|++ ...|.
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~W-CgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V---~siPT 98 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDY-DPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYEL---YDPVS 98 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTT-SHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTC---CSSEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCC-ChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---CCCCE
Confidence 44555 3677654 3 35678877776521 12345677899999999988 99999999999999999999 57899
Q ss_pred EEEEeCCccee-e-ccC-CCCCCCCCC-HHHHHHHHHHHHcCc
Q 020623 207 MVVWDGNENYL-T-VIG-SESIDEEDQ-GSQISRFLEGYREGR 245 (323)
Q Consensus 207 ivI~~~~~kY~-~-~~~-~~~~~~~~t-~~~I~~Fi~~~~~Gk 245 (323)
++++...+.-. . -.| -..+-+..+ .+.|.++|+.++.|.
T Consensus 99 ~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 99 VMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp EEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 98776443221 1 000 001123344 788888888877664
No 158
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.78 E-value=0.00099 Score=49.99 Aligned_cols=92 Identities=11% Similarity=0.012 Sum_probs=52.1
Q ss_pred eecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEEe
Q 020623 30 SILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVAL 100 (323)
Q Consensus 30 ~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv~ 100 (323)
..|+|.+++++.++.++ +++|-|... .+.+.+++.++. ++.|...+ +...+++.++++...|++++|
T Consensus 3 ~~i~~~~~~~~~~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (105)
T 4euy_A 3 NTFKTIEELATYIEEQQ---LVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLF 78 (105)
T ss_dssp -------CCSSSTTCSS---EEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEE
T ss_pred cccCCHHHHHHHHhcCC---CEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEE
Confidence 45667777777775555 567777542 246788888874 56665542 235678889999899999999
Q ss_pred cCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 101 QPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 101 k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++ .....+.|..+.+.|.+||++.
T Consensus 79 ~~G-~~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 79 YNG-KEILRESRFISLENLERTIQLF 103 (105)
T ss_dssp ETT-EEEEEEESSCCHHHHHHHHHTT
T ss_pred eCC-eEEEEEeCCcCHHHHHHHHHHh
Confidence 742 1222456888999999999864
No 159
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.77 E-value=0.0078 Score=46.46 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=70.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC-ceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK-KAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~-~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
.+..+ +.++++++++.. ++|-|... ...+.+++..+.+ .+.|..++ +...+++.+|++...|++
T Consensus 8 ~v~~l-~~~~f~~~~~~~-----vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 8 NVRVI-TDENWRELLEGD-----WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp SEEEC-CTTTHHHHTSSE-----EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccEEe-cHHHHHHHhCCC-----EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 46777 458888876542 45666542 2467788888775 56666553 235678889999899999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhhcCCCeeecC
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN 135 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~Plv~~~t 135 (323)
++|++ ++...|.|..+.+.|.+||.+...+.+.+++
T Consensus 82 ~~~~~--G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 82 YHCKD--GEFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEET--TEEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEeC--CeEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 99964 3334577888999999999998766665554
No 160
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.74 E-value=0.013 Score=44.13 Aligned_cols=92 Identities=15% Similarity=0.234 Sum_probs=64.9
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEee-cccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVA-KDFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~-~~~~~~~~~~~~~~~~p~ivv 99 (323)
.....+.+++++.++.++ +++|-|... ...+.+++.++.+ +.|... -+...+++.++++...|++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k---~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDK---LVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHTTSSS---CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHHhcCC---EEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 345678899999888766 467777543 2467788888864 555444 234567888999999999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|+++ .....+.|. +.+.|.+||.++
T Consensus 84 ~~~G-~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 84 FKNG-KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-EEEEEEeCC-CHHHHHHHHHhh
Confidence 9742 222245576 678999999865
No 161
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.74 E-value=0.017 Score=45.28 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=68.5
Q ss_pred CCCeeec-ChhhHHHhhc--CCCcEEEEEEeCCChhHHHHHHHHH---HHHHHhCCCeEEEEEcC----cchhhHhhhcC
Q 020623 128 LPLSVPI-NQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRELVFCYVGI----KQFADFADTFE 197 (323)
Q Consensus 128 ~Plv~~~-t~~~~~~~~~--~~~~~v~~f~~~~~~e~~~~~~~~l---~~~A~~~~~l~F~~vd~----~~~~~~~~~~g 197 (323)
.|.+..+ +.+++...+. .++++++.|...- =..-..+...+ .++++.++++.|+.+|. +....+++.||
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~w-C~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADW-CVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTT-CHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTT
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCC-CHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcC
Confidence 3445433 3455554333 2678877777521 12224455556 78888888899999998 34456788999
Q ss_pred CcCCCCCCeEEEEeCCccee---eccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 198 ANKKSKLPKMVVWDGNENYL---TVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 198 l~~~~~~P~ivI~~~~~kY~---~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+ ...|.+++++.+++-. .. .+..+.+.|.++++.+.
T Consensus 89 v---~~~Pt~~~~d~~G~~v~~~~~------~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 89 V---LGLPTILFFDGQGQEHPQARV------TGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp C---CSSSEEEEECTTSCBCGGGCB------CSCCCHHHHHHHHHHC-
T ss_pred C---CCCCEEEEECCCCCEeeeeee------eeccCHHHHHHHHHhcC
Confidence 9 5799999998876432 12 34578899999998653
No 162
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.74 E-value=0.018 Score=45.19 Aligned_cols=97 Identities=16% Similarity=0.267 Sum_probs=68.2
Q ss_pred CceecCChHHHHHHHHh-----------cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHh
Q 020623 28 DVSILNSDAEVSDFVEN-----------AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMV 87 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~-----------~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~ 87 (323)
.+..+ +.+++.+.+.+ .+. +++|-|... ...+.+++.++.+.+.|..++ +...+++.
T Consensus 10 ~v~~l-~~~~f~~~v~~~~~~~~~~~~~~~k--~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~ 86 (136)
T 2l5l_A 10 KVIHL-TKAEFLAKVYNFEKNPEEWKYEGDK--PAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAG 86 (136)
T ss_dssp SEEEE-CHHHHHHHTBCTTTCSSSCCBCCSS--CEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred ceEEe-cchHHHHHHHhhccCccceeecCCC--EEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence 46777 46788776653 222 567777543 246788898887777776553 23567888
Q ss_pred hcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcC
Q 020623 88 LYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 88 ~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~ 128 (323)
+|++...|++++|.. .++...+.|..+.+.|.+||.+..-
T Consensus 87 ~~~v~~~Pt~~~~~~-~G~~~~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 87 AFGIRSIPSILFIPM-EGKPEMAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp HTTCCSSCEEEEECS-SSCCEEEESCCCHHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECC-CCcEEEEeCCCCHHHHHHHHHHHhh
Confidence 999989999999943 2333356788899999999987653
No 163
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.73 E-value=0.011 Score=46.05 Aligned_cols=98 Identities=9% Similarity=0.149 Sum_probs=64.8
Q ss_pred cCCCcEEEEEEeCCChhHHHHHHHHHH--HHHHhCCC-eEEEEEcC---cchhhHhhhcCCcCCCCCCeEEEEeCCccee
Q 020623 144 DDKRKIVLAIVEDETEEKSQKLVTTLK--AAASANRE-LVFCYVGI---KQFADFADTFEANKKSKLPKMVVWDGNENYL 217 (323)
Q Consensus 144 ~~~~~~v~~f~~~~~~e~~~~~~~~l~--~~A~~~~~-l~F~~vd~---~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~ 217 (323)
..++++++.|... -=..-..+...|. ++++.+++ +.|+.+|. +....+++.||+......|.+++++.+++..
T Consensus 27 ~~~k~vlv~f~a~-wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 27 RTHKPTLLVFGAN-WCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHTCCEEEEEECT-TCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred hcCCcEEEEEcCC-CCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 3467887777652 1122345556777 78888765 99999999 6667888899882114799999998876432
Q ss_pred ec-cC-CCCCCCCCCHHHHHHHHHHHH
Q 020623 218 TV-IG-SESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 218 ~~-~~-~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.. .| ........+.+.|.+|++.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHhc
Confidence 21 12 111011468899999999875
No 164
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.70 E-value=0.014 Score=44.52 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=63.1
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeeccc-----chhhHhhcCCCCC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKDF-----SEDTMVLYDFDKV 94 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~~-----~~~~~~~~~~~~~ 94 (323)
.+..+ +.++++..+...+ +++|-|... .+.+.+++..+...+.+...+.. ..+++.++++...
T Consensus 13 ~~~~~-~~~~~~~~~~~~~---~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 13 DLEVT-TVVRAQEALDKKE---TATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp TSEEC-CHHHHHHHHHTTC---CEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSS
T ss_pred hhhcC-CHHHHHHHHhCCC---eEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCC
Confidence 45666 6788988887765 467777543 24677888877655555433211 1356778999899
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHH
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIK 124 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~ 124 (323)
|++++++++ .....+.|..+.+.|.+||+
T Consensus 89 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 PGFVHITDG-QINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CEEEEEETT-EEEEECCTTCCHHHHHHHHT
T ss_pred CeEEEEECC-EEEEEecCCCCHHHHHHHhh
Confidence 999999752 22234678889999999986
No 165
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.70 E-value=0.0057 Score=46.63 Aligned_cols=96 Identities=14% Similarity=0.170 Sum_probs=65.4
Q ss_pred CCCceecCChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 26 APDVSILNSDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
...+..+++ +++...+ +.+. +++|-|... ...+.+++.++.+.+.|...+ +...+++.++++...|
T Consensus 11 ~~~v~~l~~-~~~~~~~~~~~~---~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~P 86 (121)
T 2i1u_A 11 KSATIKVTD-ASFATDVLSSNK---PVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIP 86 (121)
T ss_dssp -CCSEECCT-TTHHHHTTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cccceecCH-HHHHHHHHhCCC---cEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCC
Confidence 445778864 6666544 4443 467777543 246788898887677776553 2356788899998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++++++ .....+.|..+.+.|.+||.+.
T Consensus 87 t~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 87 TLILFKDG-QPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHTCSC
T ss_pred EEEEEECC-EEEEEecCCCCHHHHHHHHHHH
Confidence 99999742 1223466888899999999764
No 166
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.69 E-value=0.018 Score=43.91 Aligned_cols=95 Identities=18% Similarity=0.253 Sum_probs=65.6
Q ss_pred CCceecCChHHHHHHHHh---cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCC
Q 020623 27 PDVSILNSDAEVSDFVEN---AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKV 94 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~---~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~ 94 (323)
+++..+.+.++++..+.. .+. +++|-|... ...+.+++.++.+ +.|...+ +...+++.+|++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~--~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKK--LVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTC--CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceeccCHHHHHHHHHHhhccCC--EEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcc
Confidence 345556688999888765 232 567777543 2467788888875 6665553 235678889999899
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|++++++++ .....+.|.. .+.|.+||.+.
T Consensus 89 Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEG-DVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETT-EEEEEEESSC-HHHHHHHHHHH
T ss_pred cEEEEEeCC-EEEEEEeCcC-HHHHHHHHHHH
Confidence 999999642 1223466877 88999999875
No 167
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.68 E-value=0.011 Score=47.69 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=63.7
Q ss_pred HHHHhcCCCceecCChHHHHHHHHhcCCcccEEEE-ecC--C------hhHHHHHHHhhcCceeEEeecc--cc-hhhHh
Q 020623 20 YLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIG-FGL--D------ESVMSNLALKYKKKAWFAVAKD--FS-EDTMV 87 (323)
Q Consensus 20 ~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVg-f~~--~------~~~f~~~A~~~~~~~~F~~~~~--~~-~~~~~ 87 (323)
.|++..-|.|.+++ .+.+..+.+.. . +..+. |.. + ...|.++|+++++.+.|..++. .+ ..++.
T Consensus 7 ~~~~~~~PLV~e~t-~en~~~~~~~~-~--~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~ 82 (147)
T 3bj5_A 7 HMKHNQLPLVIEFT-EQTAPKIFGGE-I--KTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILE 82 (147)
T ss_dssp --------CEEECC-TTTHHHHHSSS-C--CEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHH
T ss_pred chhhccCCeeEEec-cccHHHHhcCC-C--ceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHH
Confidence 56777889999995 45667765443 3 33333 421 1 1357889999999998988853 11 23556
Q ss_pred hcCCCC--CCeEEEecC-CCCCCcccc-CCCCHHHHHHHHHhhc
Q 020623 88 LYDFDK--VPALVALQP-SYNEHNIFY-GPFDEEFLEEFIKQNF 127 (323)
Q Consensus 88 ~~~~~~--~p~ivv~k~-~~~~~~~y~-g~~~~~~L~~fI~~~~ 127 (323)
.+|++. .|+++++.. ....++.+. ++++.+.|++|+++..
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHH
T ss_pred HcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHH
Confidence 788863 699988864 223345554 7899999999998764
No 168
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.67 E-value=0.013 Score=43.95 Aligned_cols=94 Identities=14% Similarity=0.238 Sum_probs=64.2
Q ss_pred CceecCChHHHHHHHHh---cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 28 DVSILNSDAEVSDFVEN---AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~---~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
.+..|.+.+++++.+.. .+. +++|-|... ...+.+++..+. ++.|...+ +...+++.++++...|
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~--~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQK--LIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSS--EEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred ceeEeccHHHHHHHHHHhhhcCC--eEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCccc
Confidence 57888899999998876 222 567776543 236778888776 56565443 2356788889998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++++++ .....+.| .+.+.|.+||.+.
T Consensus 82 t~~~~~~G-~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 82 TFIFLKDG-KLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEETT-EEEEEEEC-CCTTHHHHHHHHH
T ss_pred EEEEEeCC-EEEEEEec-CCHHHHHHHHHHh
Confidence 99999642 11223457 5778899999764
No 169
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.66 E-value=0.0055 Score=46.80 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=64.3
Q ss_pred CCceecCChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcC-----ceeEEeecccchhhHhhcCCC
Q 020623 27 PDVSILNSDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKK-----KAWFAVAKDFSEDTMVLYDFD 92 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~-----~~~F~~~~~~~~~~~~~~~~~ 92 (323)
..+..++ .++++..+ ..+. +++|-|... ...|.+++.++.+ .+.|+..+....+++. ++.
T Consensus 7 ~~v~~l~-~~~f~~~v~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~ 80 (121)
T 2djj_A 7 GPVTVVV-AKNYNEIVLDDTK---DVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQ 80 (121)
T ss_dssp CSSEECC-TTTTTTSSSCTTS---CEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCS
T ss_pred CCeEEec-ccCHHHHhhcCCC---CEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccC
Confidence 4577785 47777665 3333 567777542 2478889998876 6777666432223443 787
Q ss_pred CCCeEEEecCCCCC-CccccCCCCHHHHHHHHHhhc
Q 020623 93 KVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 93 ~~p~ivv~k~~~~~-~~~y~g~~~~~~L~~fI~~~~ 127 (323)
..|++++|+++... ...|.|..+.+.|.+||.++.
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp SSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred cCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 89999999873221 446789889999999998764
No 170
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.66 E-value=0.0094 Score=43.97 Aligned_cols=94 Identities=18% Similarity=0.315 Sum_probs=63.5
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEE
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv 99 (323)
|..+ +.++++..+...+. +++|-|+.. ...+.+++.++.+++.|...+ +...+++.++++...|++++
T Consensus 2 v~~~-~~~~~~~~~~~~~~--~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (105)
T 1fb6_A 2 VQDV-NDSSWKEFVLESEV--PVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLF 78 (105)
T ss_dssp CEEC-CTTTHHHHTTTCSS--CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceec-hhhhHHHHHhcCCC--cEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEE
Confidence 4556 45777776544332 567777543 246778888887767665553 23567888999989999999
Q ss_pred ecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 100 LQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 100 ~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++ .....+.|..+.+.|.+||.+.
T Consensus 79 ~~~g-~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 79 FKNG-ERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EETT-EEEEEEEECCCHHHHHHHHHHH
T ss_pred EeCC-eEEEEEecCCCHHHHHHHHHhh
Confidence 9642 1222456888889999999764
No 171
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=96.65 E-value=0.021 Score=50.31 Aligned_cols=104 Identities=11% Similarity=0.207 Sum_probs=75.3
Q ss_pred CCeeecChhhHHHhhcCCCcEEEEEE--eCCChhHHHHHHHHHHHHHHhC---CC-eEEEEEcCcc-----hhhHhhhcC
Q 020623 129 PLSVPINQDTLNLLKDDKRKIVLAIV--EDETEEKSQKLVTTLKAAASAN---RE-LVFCYVGIKQ-----FADFADTFE 197 (323)
Q Consensus 129 Plv~~~t~~~~~~~~~~~~~~v~~f~--~~~~~e~~~~~~~~l~~~A~~~---~~-l~F~~vd~~~-----~~~~~~~~g 197 (323)
+.+..+|..||..+...++++++-|+ .. .=. +...+.++|+.+ .+ +.|+.+|+++ .+.+++.||
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~Ap--WCg---l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASP--YGE---KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSC--CSH---HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCC--CCc---cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 45888999999988777777777777 32 211 667888888887 33 9999999887 667899999
Q ss_pred CcCCCCCCeEEEEeCCc-c-eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 198 ANKKSKLPKMVVWDGNE-N-YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 198 l~~~~~~P~ivI~~~~~-k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+ ....+|.++++. .. + ..... ..+..+.+.|.+||+....
T Consensus 91 V-~~~~~PTl~~F~-G~~~~~~~y~----~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 V-DDKNFPSIFLFK-GNADEYVQLP----SHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp C-CTTSCCEEEEES-SSSSSEEECC----TTSCCCHHHHHHHHHHHSS
T ss_pred C-CcCCCCeEEEEe-CCcCcceeec----ccCCCCHHHHHHHHHHhhc
Confidence 9 433899999887 32 1 11110 0234788999999998754
No 172
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.64 E-value=0.017 Score=46.02 Aligned_cols=107 Identities=17% Similarity=0.245 Sum_probs=72.0
Q ss_pred ChhhHHH-hhc-CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEe
Q 020623 135 NQDTLNL-LKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 211 (323)
Q Consensus 135 t~~~~~~-~~~-~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~ 211 (323)
+.+++.. +.. .++++++.|... -=..-..+...|.++++++++ +.|+.+|.+..+.+++.||+ ...|.++++.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i---~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHD-WDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL---YDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECT-TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCS---CSSCEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCC---CCCCEEEEEE
Confidence 4566764 333 467777777653 123345677889999999976 99999999987788889999 5799999886
Q ss_pred CCcceeeccCCC---CCCCCC-CHHHHHHHHHHHHcCc
Q 020623 212 GNENYLTVIGSE---SIDEED-QGSQISRFLEGYREGR 245 (323)
Q Consensus 212 ~~~kY~~~~~~~---~~~~~~-t~~~I~~Fi~~~~~Gk 245 (323)
..+......|.. .+.+.+ +.+.+.++|+.+++|.
T Consensus 86 ~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~ 123 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGA 123 (142)
T ss_dssp TTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHH
Confidence 543221111100 112334 3789999999998874
No 173
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.64 E-value=0.007 Score=52.26 Aligned_cols=109 Identities=20% Similarity=0.331 Sum_probs=74.5
Q ss_pred CCCeeec-ChhhHHHhhc-C--CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCC
Q 020623 128 LPLSVPI-NQDTLNLLKD-D--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 203 (323)
Q Consensus 128 ~Plv~~~-t~~~~~~~~~-~--~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~ 203 (323)
+..|.++ +.+++..... . ++++++.|+.. .-..-..+...|.++|++|+++.|+.+|++ .+.++..|++ ..
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~-wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i---~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYED-GVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSS---DV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECT-TSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCG---GG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECC-CCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCC---CC
Confidence 3457788 7888887653 3 26777777653 223456777899999999988999999988 5567778888 57
Q ss_pred CCeEEEEeCCcceeeccCCCC-CCCCCCHHHHHHHHHHH
Q 020623 204 LPKMVVWDGNENYLTVIGSES-IDEEDQGSQISRFLEGY 241 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~-~~~~~t~~~I~~Fi~~~ 241 (323)
+|.++++.....-....|... ...+++.+.|..||..+
T Consensus 173 ~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 LPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 899998874321111123222 13457789999999864
No 174
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.62 E-value=0.0082 Score=45.08 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=64.2
Q ss_pred CceecCChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 28 DVSILNSDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
.|..+++ +++...+ +.+. +++|-|... ...+.+++.++.+.+.|...+ +.+.+++.++++...|++
T Consensus 6 ~v~~l~~-~~~~~~~~~~~~---~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 81 (112)
T 1t00_A 6 TLKHVTD-DSFEQDVLKNDK---PVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTL 81 (112)
T ss_dssp CCEEECT-TTHHHHTTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eEEecch-hhHHHHHhhCCC---eEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEE
Confidence 4677854 6665544 3443 567777543 246788888887677676553 235678889999899999
Q ss_pred EEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 98 VALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 98 vv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++++ .....+.|..+.+.|.+||.+.
T Consensus 82 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 82 NVYQGG-EVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHTHHH
T ss_pred EEEeCC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 999642 1223466888889999999764
No 175
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.02 Score=42.98 Aligned_cols=93 Identities=12% Similarity=0.205 Sum_probs=63.4
Q ss_pred ceecCChHHHHHHHHh---cCCcccEEEEecCC--------hhHHHHHHHhhc-CceeEEeec-ccchhhHhhcCCCCCC
Q 020623 29 VSILNSDAEVSDFVEN---AGTFFPLFIGFGLD--------ESVMSNLALKYK-KKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~---~~~~~~~vVgf~~~--------~~~f~~~A~~~~-~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
|..|++.+++++.+.. +. +++|-|... ...+.+++.++. ..+.|...+ +...+++.++++...|
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~---~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 78 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDK---LIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVP 78 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTC---CEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ccccCCHHHHHHHHhcccCCC---EEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCccc
Confidence 6778888999998875 33 567777542 246778888752 346665553 2356788899998999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
++++|+++ .....+.|. ..++|.+||.+.
T Consensus 79 t~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKG-TILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETT-EEEEEECSC-CHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEecCC-CHHHHHHHHHHH
Confidence 99999642 122235576 455699999765
No 176
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.58 E-value=0.026 Score=44.07 Aligned_cols=91 Identities=9% Similarity=0.099 Sum_probs=62.3
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcc---------------------------hhhHhhhc
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQ---------------------------FADFADTF 196 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~---------------------------~~~~~~~~ 196 (323)
.++++++.|.... =..-......|.++++++++ +.|+.++.+. ...+.+.|
T Consensus 28 ~gk~~lv~f~~~~-C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWSIS-CHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEECTT-CHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCC-CHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 4577777776532 22345667788888888887 8888887431 23466778
Q ss_pred CCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 197 EANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 197 gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
|+ ...|.++++|.+++..... .+..+.+.+.++|+.++++
T Consensus 107 ~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 107 EN---EYVPAYYVFDKTGQLRHFQ-----AGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CC---CCSSEEEEECTTCBEEEEE-----ESCSTTHHHHHHHHHHHTT
T ss_pred CC---CCCCEEEEECCCCcEEEEe-----cCCCCHHHHHHHHHHHHhc
Confidence 88 5789999999876432210 1235778999999998875
No 177
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.58 E-value=0.01 Score=45.97 Aligned_cols=106 Identities=5% Similarity=0.082 Sum_probs=66.8
Q ss_pred eecChhhHHHhh----cCCCcEEEEEEeCCChhHHHHHHHHH---HHHHHhCCC-eEEEEEcCc--chhhHhhhcCCcCC
Q 020623 132 VPINQDTLNLLK----DDKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKK 201 (323)
Q Consensus 132 ~~~t~~~~~~~~----~~~~~~v~~f~~~~~~e~~~~~~~~l---~~~A~~~~~-l~F~~vd~~--~~~~~~~~~gl~~~ 201 (323)
..++..++.... ..++++++.|...- =..-..+...+ ..+++.+++ +.++.+|.+ ....+++.||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v--- 84 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTW-CGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGV--- 84 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTT-CTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTC---
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCC-CccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCC---
Confidence 334555555433 24577777676521 11223444455 455555544 888889987 35678889999
Q ss_pred CCCCeEEEEeCCccee-eccCCCCCCCCCCHHHHHHHHHHHHcCccc
Q 020623 202 SKLPKMVVWDGNENYL-TVIGSESIDEEDQGSQISRFLEGYREGRTE 247 (323)
Q Consensus 202 ~~~P~ivI~~~~~kY~-~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~ 247 (323)
...|.+++++.+++.. .. .+..+.+.|.+||+..+.+.-.
T Consensus 85 ~~~Pt~~~~d~~G~~~~~~------~G~~~~~~l~~~l~~~~~~~~~ 125 (130)
T 2kuc_A 85 HAYPTLLFINSSGEVVYRL------VGAEDAPELLKKVKLGVESEGH 125 (130)
T ss_dssp CSSCEEEEECTTSCEEEEE------ESCCCHHHHHHHHHHHHSCCC-
T ss_pred CCCCEEEEECCCCcEEEEe------cCCCCHHHHHHHHHHHHHhccc
Confidence 5799999998765422 11 2345788999999999876543
No 178
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.53 E-value=0.011 Score=46.03 Aligned_cols=95 Identities=20% Similarity=0.308 Sum_probs=65.1
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..++ .+++++.+...+. +++|-|+.. ...+.+++..+.+++.|..++ +...+++.++++...|+++
T Consensus 23 ~v~~l~-~~~f~~~~~~~~k--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 23 KIIHLT-DDSFDTDVLKADG--AILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CSEEEC-TTTHHHHTTTCSS--EEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred ccEecC-hhhHHHHHHhcCC--EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 467774 5777765433332 567777543 247788999887777776553 2355678899998899999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+|+++ .....+.|..+.+.|.+||.+.
T Consensus 100 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 100 LFKNG-EVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-EEEEEEcCCCCHHHHHHHHHHh
Confidence 99532 1223466888899999999864
No 179
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.53 E-value=0.00066 Score=52.76 Aligned_cols=104 Identities=9% Similarity=0.148 Sum_probs=66.3
Q ss_pred eeec-ChhhHHHhhc----CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCC
Q 020623 131 SVPI-NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 205 (323)
Q Consensus 131 v~~~-t~~~~~~~~~----~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P 205 (323)
+.++ +.+++..... .++++++.|.... -..-..+...|.+++++++++.|+.+|.+....+++.||+ ...|
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~-C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~P 91 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASW-CGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNV---EAMP 91 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSS-CSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTC---CSSC
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCC-ChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCC---Cccc
Confidence 4444 3455554332 3566666665421 0111234456788889988899999999887788899999 5789
Q ss_pred eEEEEeCCcce-eeccCCCCCCCCCCHHHHHHHHHHHHcCcc
Q 020623 206 KMVVWDGNENY-LTVIGSESIDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 206 ~ivI~~~~~kY-~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
.++++. +++. ... .+ .+.+.|.+||++++....
T Consensus 92 t~~~~~-~g~~~~~~------~g-~~~~~l~~~l~~~~~~~~ 125 (130)
T 1wmj_A 92 TFLFIK-DGAEADKV------VG-ARKDDLQNTIVKHVGATA 125 (130)
T ss_dssp CCCBCT-TTTCCBCC------CT-TCTTTHHHHHHHHTSSSC
T ss_pred eEEEEe-CCeEEEEE------eC-CCHHHHHHHHHHHHhccC
Confidence 988763 3321 111 12 466789999999887543
No 180
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.52 E-value=0.015 Score=44.43 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=65.2
Q ss_pred CceecCChHHHHH-HHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeE
Q 020623 28 DVSILNSDAEVSD-FVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 28 ~v~~i~s~~~l~~-fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~i 97 (323)
.+..++ .+++++ +++.+. +++|-|... ...+.+++.++.+++.|...+ +...+++.++++...|++
T Consensus 4 ~v~~l~-~~~f~~~~~~~~~---~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 79 (122)
T 3aps_A 4 ASIDLT-PQTFNEKVLQGKT---HWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSV 79 (122)
T ss_dssp CSEECC-HHHHHHHTTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred chhcCC-HHHHHHHHhcCCC---eEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceE
Confidence 467774 677754 444444 567777543 246788898888777776653 235678889999999999
Q ss_pred EEecCCCCCCccccC----CCCHHHHHHHHHhhc
Q 020623 98 VALQPSYNEHNIFYG----PFDEEFLEEFIKQNF 127 (323)
Q Consensus 98 vv~k~~~~~~~~y~g----~~~~~~L~~fI~~~~ 127 (323)
++|+++ +....+.| ..+.+.|.+||....
T Consensus 80 ~~~~~~-~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 80 KLYQYE-RAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp EEEEEE-GGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred EEEeCC-CccceeeccccCcCCHHHHHHHHHHHH
Confidence 999753 22223444 378899999998653
No 181
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.51 E-value=0.033 Score=42.85 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=61.3
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcc----------------------hhhHhhhcCCcCCC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ----------------------FADFADTFEANKKS 202 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~----------------------~~~~~~~~gl~~~~ 202 (323)
.++++++.|... .=..-......|.+++++++++.|+.++.+. ...+.+.||+ .
T Consensus 23 ~~k~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTP-WCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV---P 98 (136)
T ss_dssp TTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC---C
T ss_pred CCCEEEEEEECC-cChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC---C
Confidence 357887777753 2223456677888999998888888877654 2345667788 5
Q ss_pred CCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 203 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
..|.++++|.+++.....+ ..+..+.+.|.++++.++
T Consensus 99 ~~P~~~lid~~G~i~~~~~---~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 WQPAFVFYRADGTSTFVNN---PTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSSEEEEECTTSCEEEECC---SSSCCCHHHHHHHHHHC-
T ss_pred CCCEEEEECCCCcEEEEEc---CCCccCHHHHHHHHHHHh
Confidence 6899999998775432210 014567899999998764
No 182
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.48 E-value=0.021 Score=50.32 Aligned_cols=109 Identities=21% Similarity=0.312 Sum_probs=74.8
Q ss_pred CCCeeec-ChhhHHHhhc---CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCC
Q 020623 128 LPLSVPI-NQDTLNLLKD---DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 203 (323)
Q Consensus 128 ~Plv~~~-t~~~~~~~~~---~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~ 203 (323)
+..|.++ +.+++..... .++++++.|+.. .-..-..+...|.++|++|+++.|+.+|++. ..++..|++ ..
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~-wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I---~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYED-GIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSS---DV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECT-TSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCT---TT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECC-CChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCC---CC
Confidence 4467888 6888887653 256777777653 2233467778999999999999999999875 556778888 57
Q ss_pred CCeEEEEeCCcceeeccCCCCC-CCCCCHHHHHHHHHHH
Q 020623 204 LPKMVVWDGNENYLTVIGSESI-DEEDQGSQISRFLEGY 241 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~-~~~~t~~~I~~Fi~~~ 241 (323)
+|.++++..........|.... ...++.+.|..||...
T Consensus 186 ~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 186 LPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9999888743221112232221 2347888999999875
No 183
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.36 E-value=0.0099 Score=45.85 Aligned_cols=88 Identities=9% Similarity=0.018 Sum_probs=61.2
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec--c---cchhhHhhcCCCC-
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK--D---FSEDTMVLYDFDK- 93 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~--~---~~~~~~~~~~~~~- 93 (323)
....|+|.++++++++.+. +++|-|... ...|++++.. .++.|...+ . .|.+++.++++.+
T Consensus 7 ~~~~i~s~e~f~~ii~~~~---~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENK---YVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHHHCS---EEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHhcCC---CEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccC
Confidence 3578999999999998865 677777542 2367777764 456565542 1 2345889999984
Q ss_pred CCeEEEecCCCCCCccc---cCCCCHHHHHHHH
Q 020623 94 VPALVALQPSYNEHNIF---YGPFDEEFLEEFI 123 (323)
Q Consensus 94 ~p~ivv~k~~~~~~~~y---~g~~~~~~L~~fI 123 (323)
.|++++|++ +..++ .+..+.+.|++.+
T Consensus 82 sPq~il~k~---G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVN---GEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEET---TEEEEEEEGGGCSHHHHHHHT
T ss_pred CCeEEEEEC---CEEEEEeeccccCHHHHHHhh
Confidence 899999996 33333 3677888887764
No 184
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.35 E-value=0.015 Score=45.82 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=55.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..+ +.++++..+..++. ++|-|+.. ...+.+++.++.+++.|..++ +...+++.+|++...|+++
T Consensus 34 ~v~~l-~~~~~~~~~~~~~~---vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 34 WVVEA-DEKGFAQEVAGAPL---TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE---EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccC-CHHHHHHHHHcCCC---EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 35566 45777777766652 45656542 246788898887677776653 2356788899998999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+|+++ .....+.|..+.+.|.+||...
T Consensus 110 ~~~~G-~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 110 LFRRG-APVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-cEEEEEeCCCCHHHHHHHHHHH
Confidence 99642 1223467888899999999865
No 185
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.32 E-value=0.05 Score=41.67 Aligned_cols=89 Identities=15% Similarity=0.073 Sum_probs=60.6
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcc-----------------------hhhHhhhcCCcCC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKK 201 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~-----------------------~~~~~~~~gl~~~ 201 (323)
.++++++.|... .=..-......|++++++++++.|+.++.+. ...+.+.||+
T Consensus 24 ~~k~~ll~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--- 99 (136)
T 1zzo_A 24 LGKPAVLWFWAP-WCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV--- 99 (136)
T ss_dssp TTSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC---
T ss_pred CCCeEEEEEEcC-CChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC---
Confidence 457777777753 2233456678888999988887777777642 1235567777
Q ss_pred CCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 202 SKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 202 ~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
...|.+++++.+++.... .+..+.+.|.++++.+++
T Consensus 100 ~~~P~~~~id~~g~i~~~------~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVDVV------RGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CSSSEEEEECTTCCEEEE------ESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEECCCCCEEEE------ecCCCHHHHHHHHHHHhc
Confidence 578999999987754322 234678999999988753
No 186
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.30 E-value=0.017 Score=45.40 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=68.8
Q ss_pred CeeecCh-hhHHHhhcC--CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCe
Q 020623 130 LSVPINQ-DTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPK 206 (323)
Q Consensus 130 lv~~~t~-~~~~~~~~~--~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ 206 (323)
.+.+++. +++..++.. ++++++.|... .=..-..+...|.++++++ ++.|+.+|.+....+++.||+ ..+|.
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~-wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v---~~~Pt 95 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAV-WCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNI---KALPT 95 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECT-TCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCC---CCCCE
Confidence 3555653 667666554 35777767652 1122345666788888777 599999999888888889999 57999
Q ss_pred EEEEe-CCcc----eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 207 MVVWD-GNEN----YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 207 ivI~~-~~~k----Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++++. .+++ ... . + .+.+.|.++|+.++..
T Consensus 96 ~~~~~~~~g~g~~~~~~-~------G-~~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTV-E------G-ANQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEEETTEEEEEEEE-E------S-CCHHHHHHHHHHHSEE
T ss_pred EEEEEecCCCeEEEEEE-c------C-CCHHHHHHHHHHHHHh
Confidence 99883 2332 222 1 2 3688999999988654
No 187
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.30 E-value=0.01 Score=51.95 Aligned_cols=101 Identities=12% Similarity=0.139 Sum_probs=69.4
Q ss_pred hhHHHhhc-CCCcEEEEEEeCCC-hhHHHHHHHHHHHHHHhCCC------eEEEEEcCcchhhHhhhcCCcCCCCCCeEE
Q 020623 137 DTLNLLKD-DKRKIVLAIVEDET-EEKSQKLVTTLKAAASANRE------LVFCYVGIKQFADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 137 ~~~~~~~~-~~~~~v~~f~~~~~-~e~~~~~~~~l~~~A~~~~~------l~F~~vd~~~~~~~~~~~gl~~~~~~P~iv 208 (323)
..+..++. .++|+++.|..... -...+.+...+.++|+.+.. +.|+.+|.++.+++++.||+ ...|.++
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv---~~~Pt~~ 91 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKV---ERVPTVA 91 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTC---CSSSEEE
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCC---CcCCEEE
Confidence 34445554 34688766665321 23467788899999998543 99999999988889999999 3799999
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
+.+...+|. | ..+...+..|++.++++...+.
T Consensus 92 i~~g~~~~~---G------~~~~~~l~~fv~~~l~~~~~~~ 123 (243)
T 2hls_A 92 FLGGEVRWT---G------IPAGEEIRALVEVIMRLSEDES 123 (243)
T ss_dssp ETTTTEEEE---S------CCCTTHHHHHHHHHHHHHTTCC
T ss_pred EECCceeEc---C------CCcHHHHHHHHHHHHhccCCCC
Confidence 874312442 1 1245789999999886544443
No 188
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.00097 Score=52.75 Aligned_cols=81 Identities=12% Similarity=0.261 Sum_probs=57.4
Q ss_pred CeeecChhhHHHhhcCC--CcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchhhHhhhcCCcC----C
Q 020623 130 LSVPINQDTLNLLKDDK--RKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANK----K 201 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~--~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~~~~~~~gl~~----~ 201 (323)
.+..++.+++....... +++++.|...- =..-..+...|.++|+++++ +.|+.+|.+..+.+++.|++ . .
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~w-C~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v-~~~~~~ 85 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANW-SNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKV-STSPLT 85 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTT-CSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTC-CCCSSS
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCC-CHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccC-cccCCc
Confidence 57788888888765433 36776666421 11123455678889999874 99999999988888889998 2 1
Q ss_pred CCCCeEEEEeC
Q 020623 202 SKLPKMVVWDG 212 (323)
Q Consensus 202 ~~~P~ivI~~~ 212 (323)
..+|.++++..
T Consensus 86 ~~~Pt~~~~~~ 96 (137)
T 2dj0_A 86 KQLPTLILFQG 96 (137)
T ss_dssp SCSSEEEEESS
T ss_pred CCCCEEEEEEC
Confidence 17999998854
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.27 E-value=0.02 Score=50.94 Aligned_cols=98 Identities=17% Similarity=0.349 Sum_probs=72.3
Q ss_pred CCCceecCChHHHHHHHHhc-CCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 26 APDVSILNSDAEVSDFVENA-GTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~~-~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
.+.|..++ .++++++++.. +. +++|-|... .+.+.+++.++.+++.|..++ +..++++.+|++...|
T Consensus 6 ~~~v~~~~-~~~f~~~~~~~~~~--~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 6 VENIVNIN-ESNLQQVLEQSMTT--PVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp CTTEEECC-TTTHHHHHTTTTTS--CEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred CCccEECC-HHHHHHHHHhcCCC--eEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCC
Confidence 45678885 58899988652 22 577877542 357889999998777776653 2357888999999999
Q ss_pred eEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 96 ALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 96 ~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
++++|+++ .....|.|..+.+.|.+||....
T Consensus 83 t~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 83 TVYLFQNG-QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred eEEEEECC-EEEEEeeCCCCHHHHHHHHHHHc
Confidence 99999642 12224678888999999999875
No 190
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.23 E-value=0.1 Score=41.16 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=60.9
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcch------------------------hhHhhhcCC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF------------------------ADFADTFEA 198 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~------------------------~~~~~~~gl 198 (323)
.++++++.|.... =..-......|.++++++++ +.|+.++.+.- ..++..||.
T Consensus 23 ~gk~vlv~F~a~w-C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATW-CGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTT-CHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCc-CHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 3567777666531 12245566788888888853 77777776421 234455662
Q ss_pred cCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 199 NKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
.....|.++++|.+++....- .+..+.+.|.++|+.++.++-+..
T Consensus 102 -~v~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~l~~~~~~~~ 146 (151)
T 3raz_A 102 -TVGVLPFTVVEAPKCGYRQTI-----TGEVNEKSLTDAVKLAHSKCREGH 146 (151)
T ss_dssp -CSCCSSEEEEEETTTTEEEEC-----CSCCCHHHHHHHHHHHHTC-----
T ss_pred -ccCCCCEEEEECCCCcEEEEE-----CCCCCHHHHHHHHHHHHHHhhccc
Confidence 236789999999876432210 245788999999999998875543
No 191
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.10 E-value=0.035 Score=42.43 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCceecC-ChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCC
Q 020623 27 PDVSILN-SDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVP 95 (323)
Q Consensus 27 p~v~~i~-s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p 95 (323)
+.+..++ +.+++++.+ +.+. +++|-|... ...+.+++.++ ..+.|..++ +...+++.+|++...|
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~---~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~P 78 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPG---LVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIP 78 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceEecCCHHHHHHHHHhCCC---EEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCC
Confidence 5677887 888998545 4444 467777543 24677888887 566666553 2356788899998999
Q ss_pred eEEEecCCC-CCCc--cccCCCCHHHHHHHHHhhcCC
Q 020623 96 ALVALQPSY-NEHN--IFYGPFDEEFLEEFIKQNFLP 129 (323)
Q Consensus 96 ~ivv~k~~~-~~~~--~y~g~~~~~~L~~fI~~~~~P 129 (323)
++++|++.. +... .+.|.. .++|+++|.++.-|
T Consensus 79 t~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 79 ALFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred EEEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 999997511 1222 345654 55699999988755
No 192
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.09 E-value=0.043 Score=42.90 Aligned_cols=96 Identities=14% Similarity=0.225 Sum_probs=65.7
Q ss_pred CCCceecCChHHHHHHHHh----cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCC
Q 020623 26 APDVSILNSDAEVSDFVEN----AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFD 92 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~----~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~ 92 (323)
+..+..+.+.+++++.+.. +. +++|-|... ...+.+++.++. ++.|..++ +...+++.+|++.
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k---~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~ 98 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGK---IVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIK 98 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCC---EEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCC
Confidence 3457888889999887752 33 467777543 246778888875 45555442 2356788899998
Q ss_pred CCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 93 KVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
..|++++++++ .....+.|. +.++|.+||....
T Consensus 99 ~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 99 ATPTFFFLRDG-QQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp EESEEEEEETT-EEEEEEESC-CHHHHHHHHHHHH
T ss_pred cccEEEEEcCC-eEEEEEeCC-CHHHHHHHHHHHh
Confidence 89999999642 122235576 7889999998764
No 193
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.08 E-value=0.98 Score=43.74 Aligned_cols=132 Identities=13% Similarity=0.111 Sum_probs=86.8
Q ss_pred CCCeEEEecCCCCCCccccCCCCHHHHHHHH----HhhcCCCeeecChhhHHHhhcCCCcE-EEEEEeCCChhHHHHHHH
Q 020623 93 KVPALVALQPSYNEHNIFYGPFDEEFLEEFI----KQNFLPLSVPINQDTLNLLKDDKRKI-VLAIVEDETEEKSQKLVT 167 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI----~~~~~Plv~~~t~~~~~~~~~~~~~~-v~~f~~~~~~e~~~~~~~ 167 (323)
..|++.+.+++.+....|.|-=.-.++..|| .-...| ..++.+++..+.....++ +..|... .=..=+.+..
T Consensus 61 ~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~i~~f~a~-~C~~C~~~~~ 137 (521)
T 1hyu_A 61 RKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHP--SKEAQSLLEQIRDIDGDFEFETYYSL-SCHNCPDVVQ 137 (521)
T ss_dssp CSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHTTCC--CCSCHHHHHHHHHCCSCEEEEEEECT-TCSSHHHHHH
T ss_pred CCCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhcCCC--CCCCHHHHHHHHhcCCCcceEEEECC-CCcCcHHHHH
Confidence 4699999886544566787732223344444 334444 577888888886544444 4455431 1112356777
Q ss_pred HHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 168 TLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 168 ~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
.|.++|..++++.|..+|.+.++.+.+.+|+ ...|++++ +++... .+..+.+.|.+|++.
T Consensus 138 ~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i---~svPt~~i---~g~~~~-------~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 138 ALNLMAVLNPRIKHTAIDGGTFQNEITERNV---MGVPAVFV---NGKEFG-------QGRMTLTEIVAKVDT 197 (521)
T ss_dssp HHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CSSSEEEE---TTEEEE-------ESCCCHHHHHHHHCC
T ss_pred HHHHHHhHcCceEEEEEechhhHHHHHHhCC---CccCEEEE---CCEEEe-------cCCCCHHHHHHHHhh
Confidence 8889999988899999999999999999999 57999977 433222 123566777777654
No 194
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.08 E-value=0.023 Score=42.82 Aligned_cols=93 Identities=15% Similarity=0.258 Sum_probs=60.6
Q ss_pred eecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEEe
Q 020623 30 SILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVAL 100 (323)
Q Consensus 30 ~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv~ 100 (323)
..+.+.+++ +.+..++ +++|-|... ...+.+++..+. ++.|...+ +...+++.++++...|++++|
T Consensus 5 ~~~~~~~~f-~~~~~~~---~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLS---DAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHHTTCS---EEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHHHcCC---CEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 344466778 5555554 466666542 246677777765 45555442 235678889999899999999
Q ss_pred cCCCCCCccccCCCCHHHHHHHHHhhcC
Q 020623 101 QPSYNEHNIFYGPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 101 k~~~~~~~~y~g~~~~~~L~~fI~~~~~ 128 (323)
+++ .....+.|..+.+.|.+||....-
T Consensus 80 ~~G-~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 80 RDG-KVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp ESS-SEEEEEESCCCHHHHHHHHHTC--
T ss_pred ECC-EEEEEEcCCCCHHHHHHHHHHHhh
Confidence 642 222346688899999999987653
No 195
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.07 E-value=0.028 Score=43.28 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=65.0
Q ss_pred ChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhh----HhhhcCCcCCCCCCeEEEE
Q 020623 135 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFAD----FADTFEANKKSKLPKMVVW 210 (323)
Q Consensus 135 t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~----~~~~~gl~~~~~~P~ivI~ 210 (323)
|.+.+..+...++|+++.|... .=.....+...|.+++.. .++.|.++|.+++.. +++.||+ + ...|+++++
T Consensus 13 s~e~f~~ii~~~~~vvi~khat-wCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V-~-h~sPq~il~ 88 (112)
T 3iv4_A 13 SIDQFEQVIEENKYVFVLKHSE-TCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNV-K-HESPQAFYF 88 (112)
T ss_dssp SHHHHHHHHHHCSEEEEEEECT-TCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTC-C-CCSSEEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEECC-cCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCC-c-cCCCeEEEE
Confidence 3456777766667877766552 223346677788888875 459999999998754 6889999 2 468999988
Q ss_pred eCCc-ceeeccCCCCCCCCCCHHHHHHHH
Q 020623 211 DGNE-NYLTVIGSESIDEEDQGSQISRFL 238 (323)
Q Consensus 211 ~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi 238 (323)
...+ .|.-. -..++.+.|.+++
T Consensus 89 k~G~~v~~~S------H~~I~~~~l~~~~ 111 (112)
T 3iv4_A 89 VNGEMVWNRD------HGDINVSSLAQAE 111 (112)
T ss_dssp ETTEEEEEEE------GGGCSHHHHHHHT
T ss_pred ECCEEEEEee------ccccCHHHHHHhh
Confidence 7654 44432 2358888888765
No 196
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.07 E-value=0.023 Score=43.78 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=62.3
Q ss_pred ceecCChHHHHHHHHh-cCCcccEEEEecCC---------------hhHHHHHHHhhcCceeEEeec--------ccchh
Q 020623 29 VSILNSDAEVSDFVEN-AGTFFPLFIGFGLD---------------ESVMSNLALKYKKKAWFAVAK--------DFSED 84 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~---------------~~~f~~~A~~~~~~~~F~~~~--------~~~~~ 84 (323)
...+.+.+++++.+.. .+. +++|-|... ...+.+++.++.+.+.|..++ +...+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~--~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~ 83 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGK--TIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNND 83 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTS--EEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCH
T ss_pred eEEeccHHHHHHHHHHhCCC--EEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHH
Confidence 4456688999988876 222 567777533 136778888887677676553 23456
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCcc-ccCCCCHHHHHHHHHh
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHNI-FYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~~-y~g~~~~~~L~~fI~~ 125 (323)
++.++++...|++++|++ ..... +.| .+.+.|++||.+
T Consensus 84 ~~~~~~i~~~Pt~~~~~~--~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGT--PQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCSSSEEEETTS--SCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHCCCCeeCEEEEEcC--CceEecccc-CCHHHHHHHHhc
Confidence 778899999999999986 23322 223 467889999874
No 197
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=96.03 E-value=0.034 Score=43.55 Aligned_cols=102 Identities=12% Similarity=0.109 Sum_probs=63.9
Q ss_pred hcCCCeee--cC-hhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCC
Q 020623 126 NFLPLSVP--IN-QDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKS 202 (323)
Q Consensus 126 ~~~Plv~~--~t-~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~ 202 (323)
.+.|.... ++ .+.+..+.......++.|....+. ...+.|.++|+.+.++.|++++. +.++..+|+ +
T Consensus 16 q~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~----~~~~~F~~~A~~~~d~~F~~t~~---~~v~~~~~v-~-- 85 (124)
T 2l4c_A 16 GPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEI----PAVPILHSMVQKFPGVSFGISTD---SEVLTHYNI-T-- 85 (124)
T ss_dssp CSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTS----THHHHHHHHHHHCTTSEEEEECC---HHHHHHTTC-C--
T ss_pred ccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCC----hhHHHHHHHHHhCCCceEEEECh---HHHHHHcCC-C--
Confidence 34455443 43 455666665555566666653221 22468999999994499999875 457788888 3
Q ss_pred CCCeEEEEeC-CcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 203 KLPKMVVWDG-NENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 203 ~~P~ivI~~~-~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
.|.++++.. +.+.....|.. .++++.+.|.+||+.
T Consensus 86 -~~~vvlfkkfde~~~~~~g~~--~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 86 -GNTICLFRLVDNEQLNLEDED--IESIDATKLSRFIEI 121 (124)
T ss_dssp -SSCEEEEETTTTEEEEECHHH--HTTCCHHHHHHHHHH
T ss_pred -CCeEEEEEcCCCCceeecCcc--cCCCCHHHHHHHHHH
Confidence 688988886 33322221100 025799999999985
No 198
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.03 E-value=0.09 Score=41.93 Aligned_cols=95 Identities=9% Similarity=0.142 Sum_probs=58.7
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchh----hHhhhc----------------------
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA----DFADTF---------------------- 196 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~----~~~~~~---------------------- 196 (323)
.++++++.|... .=..-......|.++++++++ +.|+.++.+... ++++.+
T Consensus 33 ~gk~vlv~f~~~-~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFFAT-WCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEECT-TSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEEcC-cCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 356777767642 112345566778888888775 888887765432 222222
Q ss_pred -CCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 197 -EANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 197 -gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
|+ ...|.++++|.+++....- .+..+.+.+.++|+.+++.....
T Consensus 112 ~~i---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~l~~~~~~ 156 (165)
T 3or5_A 112 GGI---TGIPTSFVIDASGNVSGVI-----VGPRSKADFDRIVKMALGAKAAT 156 (165)
T ss_dssp TCS---CSSSEEEEECTTSBEEEEE-----CSCCCHHHHHHHHHHHHC-----
T ss_pred cCC---CCCCeEEEECCCCcEEEEE-----cCCCCHHHHHHHHHHHHhhhccc
Confidence 45 5789999999877432210 23467899999999998755443
No 199
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.03 E-value=0.1 Score=40.69 Aligned_cols=98 Identities=11% Similarity=0.175 Sum_probs=65.7
Q ss_pred cCCCceecCChHHHHHHHHhc-CCcccEEEEecCC--------hhHH---HHHHHhhcCceeEEeecc-----cchhhHh
Q 020623 25 VAPDVSILNSDAEVSDFVENA-GTFFPLFIGFGLD--------ESVM---SNLALKYKKKAWFAVAKD-----FSEDTMV 87 (323)
Q Consensus 25 ~~p~v~~i~s~~~l~~fl~~~-~~~~~~vVgf~~~--------~~~f---~~~A~~~~~~~~F~~~~~-----~~~~~~~ 87 (323)
..|++..+.+.++++..+.+. +. +++|-|... ...+ .+++..+.+ +.|...+. ...+++.
T Consensus 9 ~~~~f~~~~~~~~~~~~l~~~~~k--~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~ 85 (134)
T 2fwh_A 9 THLNFTQIKTVDELNQALVEAKGK--PVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLK 85 (134)
T ss_dssp -CCCCEECCSHHHHHHHHHHHTTS--CEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHH
T ss_pred cCCCcEEecCHHHHHHHHHHhcCC--cEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHH
Confidence 466777788999988877653 22 567777543 1233 567777764 55544321 2346778
Q ss_pred hcCCCCCCeEEEecCCCCCC---ccccCCCCHHHHHHHHHhh
Q 020623 88 LYDFDKVPALVALQPSYNEH---NIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 88 ~~~~~~~p~ivv~k~~~~~~---~~y~g~~~~~~L~~fI~~~ 126 (323)
+|++...|+++++.. .++. ..+.|..+.++|.+||...
T Consensus 86 ~~~v~~~Pt~~~~d~-~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 86 HLNVLGLPTILFFDG-QGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp HTTCCSSSEEEEECT-TSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred HcCCCCCCEEEEECC-CCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 999989999999943 2332 3467988999999999754
No 200
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.02 E-value=0.018 Score=44.31 Aligned_cols=95 Identities=17% Similarity=0.245 Sum_probs=65.2
Q ss_pred CCceecCChHHHHHHHHh----cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCC
Q 020623 27 PDVSILNSDAEVSDFVEN----AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDK 93 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~----~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~ 93 (323)
.++..|++.+++++.+.. ++ +++|-|... ...+.+++.++. ++.|...+ +...+++.++++..
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~---~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGK---VVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTC---BCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCC---EEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCc
Confidence 457788888999988875 33 456666532 357888888876 45555443 23567888999988
Q ss_pred CCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 94 VPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 94 ~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
.|++++++++ .....+.| .+.+.|.+||.+..
T Consensus 90 ~Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 90 MPTFLFIKDG-AEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp SCCCCBCTTT-TCCBCCCT-TCTTTHHHHHHHHT
T ss_pred cceEEEEeCC-eEEEEEeC-CCHHHHHHHHHHHH
Confidence 9999998642 22234557 46778999998754
No 201
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=95.99 E-value=0.024 Score=40.04 Aligned_cols=65 Identities=9% Similarity=0.116 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 164 KLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 164 ~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.....|+++++++++ +.|+.+|.++.+.+++.+|+ ...|.+++ +++... .+..+.+.|.+|++..
T Consensus 19 ~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~---~G~~~~-------~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 19 AAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGI---MAVPTIVI---NGDVEF-------IGAPTKEALVEAIKKR 84 (85)
T ss_dssp THHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTT---CCSSEEEE---TTEEEC-------CSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCC---cccCEEEE---CCEEee-------ecCCCHHHHHHHHHHh
Confidence 455678889999986 99999999877778888998 57999988 444322 2335778999999875
No 202
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=95.99 E-value=0.019 Score=40.50 Aligned_cols=66 Identities=9% Similarity=0.075 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 164 KLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 164 ~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.+...|+++++++++ +.|+.+|.+..+.+++.+|+ ...|.+++ +++... .| ..+.+.|.+|+++.+
T Consensus 18 ~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~---~G~~~~-~G------~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 18 MAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGL---MAVPAIAI---NGVVRF-VG------APSREELFEAINDEM 84 (85)
T ss_dssp THHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCS---SCSSEEEE---TTTEEE-EC------SSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCc---eeeCEEEE---CCEEEE-cc------CCCHHHHHHHHHHHh
Confidence 455678888999886 99999999877788889999 57999988 443322 12 356789999998765
No 203
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.98 E-value=0.014 Score=45.29 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=67.0
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhc--CceeEEeecc-cchhhHhhcCCCCCC
Q 020623 27 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYK--KKAWFAVAKD-FSEDTMVLYDFDKVP 95 (323)
Q Consensus 27 p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~--~~~~F~~~~~-~~~~~~~~~~~~~~p 95 (323)
..|..|+ .++++..+...+. +++|-|... ...|.+++.++. ..+.|...+. ....++.+|++...|
T Consensus 7 ~~v~~l~-~~~~~~~~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 7 GPVKVVV-GKTFDAIVMDPKK--DVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp CSSEECC-TTTCCCCCTCTTS--EEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred CceEEEc-CCCHHHHhccCCC--cEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 3577775 4677666554232 567777643 246788898887 3566666532 234556678998999
Q ss_pred eEEEecCCCCC-Ccccc-CCCCHHHHHHHHHhhcCCC
Q 020623 96 ALVALQPSYNE-HNIFY-GPFDEEFLEEFIKQNFLPL 130 (323)
Q Consensus 96 ~ivv~k~~~~~-~~~y~-g~~~~~~L~~fI~~~~~Pl 130 (323)
++++|+++... ...|. |..+.+.|.+||..+.-..
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 99999863222 22466 5678899999999876443
No 204
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.94 E-value=0.047 Score=43.81 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=66.8
Q ss_pred ceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..+.+.++++..+.. .+. +++|-|... .+.+.+++.++.+.+.|..++ +...+++.+|++...|+++
T Consensus 5 l~~i~~~~~~~~~i~~~~~k--~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~ 82 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEK--VLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTV 82 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSS--EEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred eeecCCHHHHHHHHHhcCCC--EEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEE
Confidence 4557788999988763 332 577877643 247788898888767676553 2456788899998999999
Q ss_pred EecCCCCCC---------ccccC-CCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEH---------NIFYG-PFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~---------~~y~g-~~~~~~L~~fI~~~ 126 (323)
+++++ ... ..+.| ..+.++|.+||...
T Consensus 83 ~~~~G-~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 83 FFFNG-QHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEETT-EEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EEECC-eEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 88753 112 23557 66788899998764
No 205
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=95.87 E-value=0.054 Score=42.69 Aligned_cols=94 Identities=9% Similarity=0.139 Sum_probs=58.0
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchh-----------------------hHhhhcCCcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA-----------------------DFADTFEANK 200 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~-----------------------~~~~~~gl~~ 200 (323)
++++++.|....- ..-......|.++++++++ +.|+.++.+... .+.+.||+
T Consensus 30 gk~~lv~f~~~~C-~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 106 (152)
T 2lja_A 30 GKYIYIDVWATWC-GPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI-- 106 (152)
T ss_dssp TSEEEEEECCSSC-CGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC--
T ss_pred CCEEEEEEECCcC-HhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc--
Confidence 4566655553211 1123344566677777754 777776654321 45567787
Q ss_pred CCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 201 KSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 201 ~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
...|.+++++.+++..... .+..+.+.|.++|+...++.=+.
T Consensus 107 -~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~~~~~~~~ 148 (152)
T 2lja_A 107 -NGIPRFILLDRDGKIISAN-----MTRPSDPKTAEKFNELLGLEGHH 148 (152)
T ss_dssp -CSSCCEEEECTTSCEEESS-----CCCTTCHHHHHHHHHHHTCCSSS
T ss_pred -CCCCEEEEECCCCeEEEcc-----CCCCCHHHHHHHHHHHhcccccc
Confidence 4789999999876433211 23467789999999998875443
No 206
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=95.87 E-value=0.013 Score=45.42 Aligned_cols=94 Identities=20% Similarity=0.339 Sum_probs=58.2
Q ss_pred CceecCChHHHHHHH-HhcCCcccEEEEecCC----------------------hhHHHHHHHhhcCceeEEeec-ccch
Q 020623 28 DVSILNSDAEVSDFV-ENAGTFFPLFIGFGLD----------------------ESVMSNLALKYKKKAWFAVAK-DFSE 83 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~----------------------~~~f~~~A~~~~~~~~F~~~~-~~~~ 83 (323)
.+..++ .++++..+ +.++ +++|-|... .+.|.+++.++.+++.|..++ +...
T Consensus 4 ~v~~l~-~~~f~~~~~~~~k---~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~ 79 (123)
T 1oaz_A 4 KIIHLT-DDSFDTDVLKADG---AILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 79 (123)
T ss_dssp SCEECC-STTHHHHTTSCSS---EEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCT
T ss_pred ccEecC-hhhHHHHHHhCCC---eEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 467774 57776544 4444 567766431 235677787777667676553 2356
Q ss_pred hhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 84 DTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 84 ~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++.+|++...|++++|+++ .....+.|..+.++|.+||...
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNG-EVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESS-SEEEEEESCCCHHHHHHHHTTT
T ss_pred HHHHHcCCCccCEEEEEECC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 78889999999999999542 1222467888899999999764
No 207
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.77 E-value=0.017 Score=44.41 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=56.1
Q ss_pred cEEEEecCC--------hhHHHHHHHhhcCceeEEeec---ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHH
Q 020623 50 PLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK---DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEF 118 (323)
Q Consensus 50 ~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~ 118 (323)
+++|-|... ...+.+++.++.+.+.|...+ +...+++.+|++...|+++++.+.-.....+.|..+.+.
T Consensus 28 ~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~ 107 (126)
T 2l57_A 28 PTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNN 107 (126)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHH
T ss_pred cEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHH
Confidence 467776542 246778888887667665553 224567889999889999999852112224668889999
Q ss_pred HHHHHHhhcCC
Q 020623 119 LEEFIKQNFLP 129 (323)
Q Consensus 119 L~~fI~~~~~P 129 (323)
|.+||....-+
T Consensus 108 l~~~l~~~~~~ 118 (126)
T 2l57_A 108 IETILNSLGVK 118 (126)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHHhcc
Confidence 99999987654
No 208
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.76 E-value=0.069 Score=42.14 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=59.5
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcc----------------------hhhHhhhcCCcC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ----------------------FADFADTFEANK 200 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~----------------------~~~~~~~~gl~~ 200 (323)
.++++++.|.... =..-......|.++++++++ +.|+.++.+. ...+.+.||+
T Consensus 25 ~gk~vlv~F~~~~-C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 101 (151)
T 2f9s_A 25 KGKGVFLNFWGTW-CEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV-- 101 (151)
T ss_dssp TTSEEEEEEECTT-CHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC--
T ss_pred CCCEEEEEEECCC-CHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC--
Confidence 3567777676531 12335566777788887753 7777766542 1245667788
Q ss_pred CCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 201 KSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 201 ~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
...|.++++|.+++....- .+..+.+.|.++|+.++++...+
T Consensus 102 -~~~P~~~lid~~G~i~~~~-----~G~~~~~~l~~~l~~ll~~~~~~ 143 (151)
T 2f9s_A 102 -SPLPTTFLINPEGKVVKVV-----TGTMTESMIHDYMNLIKPGETSG 143 (151)
T ss_dssp -CSSCEEEEECTTSEEEEEE-----ESCCCHHHHHHHHHHHSCC----
T ss_pred -CCCCeEEEECCCCcEEEEE-----eCCCCHHHHHHHHHHHHhhhhcc
Confidence 4689999999876422210 13467899999999998876655
No 209
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.73 E-value=0.011 Score=46.49 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=64.6
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC-ceeEEeecc-cchhhHhhcCCC-----
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK-KAWFAVAKD-FSEDTMVLYDFD----- 92 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~-~~~F~~~~~-~~~~~~~~~~~~----- 92 (323)
.+..++ .+++++.+..+... +++|-|... ...+.+++.++.+ .+.|..++. ...+++.++++.
T Consensus 8 ~v~~l~-~~~f~~~~~~~~~~-~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 8 YIKYFN-DKTIDEELERDKRV-TWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp CCEECC-TTHHHHHHHHSTTS-CEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred eEEEcc-HhhHHHHHhcCCCC-EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 366774 68888888766521 467777542 3578899999875 677766632 356788899997
Q ss_pred -CCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 93 -KVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 93 -~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..|++++|+++ .....+.|..+.+.|.+||.++
T Consensus 86 ~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGG-KEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSS-SEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCCEEEEEECC-EEEEEecCcCchHHHHHHHhcc
Confidence 89999999742 1222356766666677776544
No 210
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.71 E-value=0.079 Score=41.76 Aligned_cols=94 Identities=7% Similarity=0.031 Sum_probs=60.0
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcC-----------------------cchhhHhhhcCCcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGI-----------------------KQFADFADTFEANK 200 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~-----------------------~~~~~~~~~~gl~~ 200 (323)
++++++.|.... =..-......|+++++++++ +.|+.++. +....+.+.||+
T Consensus 28 gk~~lv~f~~~~-C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i-- 104 (153)
T 2l5o_A 28 GKVTLINFWFPS-CPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT-- 104 (153)
T ss_dssp TCEEEEEEECTT-CTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC--
T ss_pred CCEEEEEEECCC-CccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC--
Confidence 466666665421 12234556677777777663 66655542 112345677888
Q ss_pred CCCCCeEEEEeCCcce--eeccCCCCCCCCCCHHHHHHHHHHHHcCcccccc
Q 020623 201 KSKLPKMVVWDGNENY--LTVIGSESIDEEDQGSQISRFLEGYREGRTEQKK 250 (323)
Q Consensus 201 ~~~~P~ivI~~~~~kY--~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~ 250 (323)
...|.+++++.+++. .+. +..+.+.|.++|+.++.+.-.+-.
T Consensus 105 -~~~P~~~lid~~G~i~~~~~-------g~~~~~~l~~~l~~ll~~~~~~~~ 148 (153)
T 2l5o_A 105 -QVYPTSVLIGKKGEILKTYV-------GEPDFGKLYQEIDTAWRNSDAEGH 148 (153)
T ss_dssp -CSSSEEEEECSSSCCCEEEE-------SSCCHHHHHHHHHHHHHCCSSCCT
T ss_pred -CccCeEEEECCCCcEEEEEc-------CCCCHHHHHHHHHHHHHhhhhccc
Confidence 468999999987643 221 246789999999999998776644
No 211
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.68 E-value=0.082 Score=41.78 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=59.7
Q ss_pred CcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcC---------------------------cchhhHhhhcCCc
Q 020623 147 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------------------------KQFADFADTFEAN 199 (323)
Q Consensus 147 ~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~---------------------------~~~~~~~~~~gl~ 199 (323)
+++++.|.... -..-......|.++++++ ++.|+.++. .....+...||+
T Consensus 31 k~vll~f~~~~-C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v- 107 (154)
T 3ia1_A 31 KPAVIVFWASW-CTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV- 107 (154)
T ss_dssp SSEEEEEECTT-CHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB-
T ss_pred CeEEEEEEccc-ChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC-
Confidence 67777666531 123355667788888888 766666666 133456778888
Q ss_pred CCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 200 KKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 200 ~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
...|.++++|.+++....- .+..+.+.|.++|++...+.-..
T Consensus 108 --~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~~~~~~~~ 149 (154)
T 3ia1_A 108 --LGQPWTFVVDREGKVVALF-----AGRAGREALLDALLLAGADLEGH 149 (154)
T ss_dssp --CSSCEEEEECTTSEEEEEE-----ESBCCHHHHHHHHHHTTCCC---
T ss_pred --CcccEEEEECCCCCEEEEE-----cCCCCHHHHHHHHHhccCccccc
Confidence 4789999999877422210 23468899999999988765443
No 212
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=95.67 E-value=0.13 Score=40.73 Aligned_cols=91 Identities=13% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcc-------------------------hhhHhhhcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------------FADFADTFEA 198 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~-------------------------~~~~~~~~gl 198 (323)
++++++.|....- ..-......|.++++++++ +.|+.++.+. ...+.+.||+
T Consensus 29 gk~vll~F~a~~C-~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 29 GKYVLVDFWFAGC-SWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TSEEEEEEECTTC-TTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCCC-hhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4666666664211 1234555677777777764 7777776653 2456677888
Q ss_pred cCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 199 NKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
...|.++++|.+++-... ..+.+.|.++|+.++++....
T Consensus 108 ---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~~l~~~~~~~ 146 (152)
T 2lrn_A 108 ---VGFPHIILVDPEGKIVAK--------ELRGDDLYNTVEKFVNGAKEG 146 (152)
T ss_dssp ---CSSCEEEEECTTSEEEEE--------CCCTTHHHHHHHHHHTSSSSC
T ss_pred ---CcCCeEEEECCCCeEEEe--------eCCHHHHHHHHHHHHhhcccc
Confidence 468999999988753321 134578999999998876554
No 213
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.62 E-value=0.058 Score=46.20 Aligned_cols=95 Identities=19% Similarity=0.334 Sum_probs=67.9
Q ss_pred ceecCChHHHHHH-HHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDF-VENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~f-l~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..+ |.++++.. ++.++ +++|-|... ...+.+++.++.+.+.|..++ +...+++.+|++...|+++
T Consensus 14 ~~~l-t~~~f~~~v~~~~k---~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (222)
T 3dxb_A 14 IIHL-TDDSFDTDVLKADG---AILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 89 (222)
T ss_dssp CEEC-CTTTHHHHHTTCSS---CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEE
T ss_pred ceeC-CHHHHHHHHHhcCC---EEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEE
Confidence 5556 56888774 44444 577777543 247888999998777676553 2356788899999999999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhhcC
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~~~ 128 (323)
+++++ .....+.|..+.+.|.+||....-
T Consensus 90 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 90 LFKNG-EVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHHSC
T ss_pred EEECC-eEEEEeccccChHHHHHHHHhhcc
Confidence 99742 122356788899999999998753
No 214
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.60 E-value=0.12 Score=50.40 Aligned_cols=107 Identities=9% Similarity=0.075 Sum_probs=77.5
Q ss_pred CeeecChhhHHHhh-cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC----eEEEEEcCc--chhhHhhhcCCcCCC
Q 020623 130 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE----LVFCYVGIK--QFADFADTFEANKKS 202 (323)
Q Consensus 130 lv~~~t~~~~~~~~-~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~----l~F~~vd~~--~~~~~~~~~gl~~~~ 202 (323)
.|.+++.+++.... ..++++++.|... -=..-..+...+.++|+++++ +.|+.+|++ ..+.+++.||+ .
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~-WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V---~ 88 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFAS-WCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNI---A 88 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECT-TSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTC---C
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECC-CCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCC---c
Confidence 47788999998754 5557777777652 112345677888899988763 999999995 36788999999 5
Q ss_pred CCCeEEEEeC---Ccc-eeeccCCCCCCCCCCHHHHHHHHHHHHcCcc
Q 020623 203 KLPKMVVWDG---NEN-YLTVIGSESIDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 203 ~~P~ivI~~~---~~k-Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
..|.+++++. +++ .... -+..+.+.|.+||++++....
T Consensus 89 ~~PTl~~f~~g~~~G~~~~~~------~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 89 GFPTVRFFQAFTKNGSGATLP------GAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SBSEEEEECTTCCSCCCEEEC------CSSCCHHHHHHHHHHHHTTCC
T ss_pred ccCEEEEEcCcccCCCceeEe------cCCCCHHHHHHHHHHHHhhcc
Confidence 8999999986 222 1111 123688999999999987544
No 215
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.57 E-value=0.046 Score=42.20 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=55.1
Q ss_pred cEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHH
Q 020623 50 PLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLE 120 (323)
Q Consensus 50 ~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~ 120 (323)
+++|-|... ...+.+++.++.+++.|..++ +...+++.++++...|++++++++ .....+.|..+.++|.
T Consensus 44 ~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~ 122 (128)
T 3ul3_B 44 VIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNK-TMLARKDHFVSSNDLI 122 (128)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETT-EEEEEESSCCCHHHHH
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECC-EEEEEecCCCCHHHHH
Confidence 567777543 246788898888777676553 235678889999999999999642 2223466888999999
Q ss_pred HHHHhh
Q 020623 121 EFIKQN 126 (323)
Q Consensus 121 ~fI~~~ 126 (323)
+||+++
T Consensus 123 ~~l~~~ 128 (128)
T 3ul3_B 123 ALIKKH 128 (128)
T ss_dssp HHHTTC
T ss_pred HHHHhC
Confidence 999764
No 216
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=95.56 E-value=0.082 Score=40.96 Aligned_cols=86 Identities=9% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC--CeEEEEEcCcc-------------------------hhhHhhhcC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------------FADFADTFE 197 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~--~l~F~~vd~~~-------------------------~~~~~~~~g 197 (323)
.++++++.|... .-..-......|.+++++++ ++.|+.++.+. ...+.+.||
T Consensus 33 ~gk~~ll~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTS-WCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECS-SCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECC-CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 456777777653 22334567788899999988 38888777642 234667788
Q ss_pred CcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHH
Q 020623 198 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 239 (323)
Q Consensus 198 l~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~ 239 (323)
+ ...|.++++|.+++....- .+..+.+.|.++|+
T Consensus 112 v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 I---ITIPTSFLLNEKGEIEKTK-----IGPMTAEQLKEWTE 145 (145)
T ss_dssp C---CEESEEEEECTTCCEEEEE-----ESCCCHHHHHHHHC
T ss_pred c---CccCeEEEEcCCCcEEEEE-----cCCcCHHHHHHhhC
Confidence 8 4689999999876432110 23467888888763
No 217
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=95.52 E-value=0.1 Score=41.91 Aligned_cols=89 Identities=12% Similarity=0.199 Sum_probs=58.6
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCc------------------ch-----------------
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK------------------QF----------------- 189 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~------------------~~----------------- 189 (323)
.++++++.|.... =..-......|.+++++++++.|+.++.+ .-
T Consensus 36 ~gk~~lv~F~~~~-C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAW-CPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTT-CTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCC-CcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 3567777676531 12245666788888888888777777654 11
Q ss_pred -----hhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCC-CHHHHHHHHHHHHcC
Q 020623 190 -----ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED-QGSQISRFLEGYREG 244 (323)
Q Consensus 190 -----~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~-t~~~I~~Fi~~~~~G 244 (323)
..+.+.||+ ...|.++++|.+++... .| .. +.+.|.++|+.++.|
T Consensus 115 ~~~d~~~~~~~~~v---~~~P~~~lid~~G~i~~-~g------~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNV---RSIDYIVIMDKSSNVLY-AG------TTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTC---CSSSEEEEEETTCCEEE-EE------ESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCC---CCceEEEEEcCCCcEEE-eC------CCCCHHHHHHHHHHHhcC
Confidence 134556677 57899999999876544 22 24 789999999988765
No 218
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.44 E-value=0.094 Score=41.61 Aligned_cols=96 Identities=16% Similarity=0.168 Sum_probs=63.8
Q ss_pred ceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..+.+.++++..+.+ .+. +++|-|... ...+.+++.++.+.+.|..++ +...+++.++++...|+++
T Consensus 5 l~~i~~~~~~~~~v~~~~~k--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~ 82 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDR--VVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVM 82 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSS--EEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEE
T ss_pred HhccCCHHHHHHHHHhcCCC--EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEE
Confidence 4567788999876654 332 577877643 247788999887777776553 2345678899998999999
Q ss_pred EecCCCCCC--------ccccCCCC-HHHHHHHHHhh
Q 020623 99 ALQPSYNEH--------NIFYGPFD-EEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~--------~~y~g~~~-~~~L~~fI~~~ 126 (323)
+|+++..-. ....|..+ .++|.++|...
T Consensus 83 ~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 83 FFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 997531111 01334444 78888888754
No 219
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=95.39 E-value=0.13 Score=38.27 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=62.3
Q ss_pred CceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecc--cchhhHhhcCCCCCCe
Q 020623 28 DVSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKD--FSEDTMVLYDFDKVPA 96 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~--~~~~~~~~~~~~~~p~ 96 (323)
.+..|+ .+++++.+.. .+. +++|-|... ...+.+++.++.+ +.|...+. ...+++.++++...|+
T Consensus 6 ~v~~l~-~~~~~~~~~~~~~~--~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 6 KVTEVN-KDTFWPIVKAAGDK--PVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp SEEEEC-TTTHHHHHTTCTTS--CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred ccEEec-hHHHHHHHHhcCCC--EEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeE
Confidence 467785 4888888874 222 567777543 2467788888764 55554432 3567888999988999
Q ss_pred EEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 97 LVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 97 ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++++ .....+.|. ..+.|.+||...
T Consensus 82 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 82 FKILKEN-SVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEEESSS-SEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-cEEEEEcCC-CHHHHHHHHHHh
Confidence 8888652 112235576 478899999764
No 220
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.37 E-value=0.18 Score=39.51 Aligned_cols=95 Identities=8% Similarity=0.084 Sum_probs=58.6
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchh----------------------hHhhhcCCcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA----------------------DFADTFEANKK 201 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~----------------------~~~~~~gl~~~ 201 (323)
++++++.|.... -..-......|.++++++++ +.++.++.+.-. .+.+.||+
T Consensus 28 gk~vll~f~~~~-C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--- 103 (152)
T 3gl3_A 28 GSVVYLDFWASW-CGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGV--- 103 (152)
T ss_dssp TSEEEEEEECTT-CTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTC---
T ss_pred CCEEEEEEECCc-CHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCC---
Confidence 567777666431 12245566778888888764 777777665322 34456777
Q ss_pred CCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 202 SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 202 ~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
...|.++++|.+++ +... | ....+.+.|.++|+..+.+.-.+.
T Consensus 104 ~~~P~~~lid~~G~i~~~~~-g----~~~~~~~~l~~~i~~~~~~~~~~~ 148 (152)
T 3gl3_A 104 KGMPTSFLIDRNGKVLLQHV-G----FRPADKEALEQQILAALGGNEGHH 148 (152)
T ss_dssp CSSSEEEEECTTSBEEEEEE-S----CCTTTHHHHHHHHHHHTC------
T ss_pred CCCCeEEEECCCCCEEEEEc-c----CCCcCHHHHHHHHHHHHccccccc
Confidence 57899999998764 3332 2 123467899999999988765543
No 221
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.36 E-value=0.027 Score=48.48 Aligned_cols=97 Identities=16% Similarity=0.195 Sum_probs=64.8
Q ss_pred ceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEEe
Q 020623 29 VSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVAL 100 (323)
Q Consensus 29 v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv~ 100 (323)
|..|.+.+++.+.+.+..-..+++|-|+.. ...+.++|.+|. .+.|..++....+++.+|++...|++++|
T Consensus 101 v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~~~~l~~~~~i~~~PTl~~~ 179 (217)
T 2trc_P 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRASNTGAGDRFSSDVLPTLLVY 179 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHHHHTCSTTSCGGGCSEEEEE
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECCcHHHHHHCCCCCCCEEEEE
Confidence 778878899999887653111567777542 247788898875 56666553224456778888889999999
Q ss_pred cCCCCCCccccC-------CCCHHHHHHHHHhhc
Q 020623 101 QPSYNEHNIFYG-------PFDEEFLEEFIKQNF 127 (323)
Q Consensus 101 k~~~~~~~~y~g-------~~~~~~L~~fI~~~~ 127 (323)
+++ .....+.| .++.+.|++||..+.
T Consensus 180 ~~G-~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 180 KGG-ELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp ETT-EEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred ECC-EEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 853 11112333 345689999998764
No 222
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.27 E-value=0.066 Score=41.38 Aligned_cols=96 Identities=19% Similarity=0.107 Sum_probs=60.9
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv 99 (323)
.+..| +.+++.+.+.+++...+++|-|... ...+.++|.+|. ++.|...+ . ++.+.+|++...|++++
T Consensus 4 ~v~~i-t~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd-~-d~~~~~~~v~~~PT~~~ 79 (118)
T 3evi_A 4 ELREI-SGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAI-V-NSCIQHYHDNCLPTIFV 79 (118)
T ss_dssp SCEEC-CGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEE-G-GGTSTTCCGGGCSEEEE
T ss_pred ceEEe-CHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEE-h-HHhHHHCCCCCCCEEEE
Confidence 35678 4577776554433111467777543 247889999986 56776653 1 23356888888999999
Q ss_pred ecCCCCC-Cc----cccC-CCCHHHHHHHHHhhc
Q 020623 100 LQPSYNE-HN----IFYG-PFDEEFLEEFIKQNF 127 (323)
Q Consensus 100 ~k~~~~~-~~----~y~g-~~~~~~L~~fI~~~~ 127 (323)
|+++..- +. ..-| .++.++|+.||.++.
T Consensus 80 fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 80 YKNGQIEAKFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp EETTEEEEEEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred EECCEEEEEEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 9974211 11 1112 578999999998753
No 223
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.24 E-value=0.15 Score=39.81 Aligned_cols=95 Identities=19% Similarity=0.148 Sum_probs=62.4
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVA 99 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv 99 (323)
.+..| +.+++++.+..+....+++|-|... ...+.++|.++. ++.|..++. + +...+|++...|++++
T Consensus 11 ~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~-~-~~~~~~~i~~~Pt~~~ 86 (135)
T 2dbc_A 11 ELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIV-N-SCIEHYHDNCLPTIFV 86 (135)
T ss_dssp SCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECC-S-SSCSSCCSSCCSEEEE
T ss_pred ceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEh-h-cCcccCCCCCCCEEEE
Confidence 37778 7899988776543111567777643 246788898875 566665532 1 2235788888999999
Q ss_pred ecCCCCCCccccCC-------CCHHHHHHHHHhhc
Q 020623 100 LQPSYNEHNIFYGP-------FDEEFLEEFIKQNF 127 (323)
Q Consensus 100 ~k~~~~~~~~y~g~-------~~~~~L~~fI~~~~ 127 (323)
|+++ .....+.|. ++.+.|++||.++.
T Consensus 87 ~~~G-~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 87 YKNG-QIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp ESSS-SCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EECC-EEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 9853 222223342 47899999999874
No 224
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.13 E-value=0.079 Score=46.56 Aligned_cols=97 Identities=19% Similarity=0.140 Sum_probs=65.8
Q ss_pred CceecCChHHHHHHHHhc--CCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeE
Q 020623 28 DVSILNSDAEVSDFVENA--GTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 97 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~--~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~i 97 (323)
.|..|.+.+++.+.+... +. +++|-|+.. .+.+.++|.+|.+ +.|..++....+++.+|++...|++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k--~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~~~l~~~~~I~~~PTl 189 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKIT--TIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASNTGAGDRFSSDVLPTL 189 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTC--EEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHHHCCTTSSCTTTCSEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCC--EEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCcHHHHHHCCCCCCCEE
Confidence 478887889999988653 22 567777542 2478899998864 6666553222456778898889999
Q ss_pred EEecCCCC-CCc-cc---cC-CCCHHHHHHHHHhhc
Q 020623 98 VALQPSYN-EHN-IF---YG-PFDEEFLEEFIKQNF 127 (323)
Q Consensus 98 vv~k~~~~-~~~-~y---~g-~~~~~~L~~fI~~~~ 127 (323)
++|+++.. ... -+ -| .++.+.|+.||..+.
T Consensus 190 l~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 190 LVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99985321 111 12 13 367889999999875
No 225
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.02 E-value=0.001 Score=56.73 Aligned_cols=84 Identities=14% Similarity=0.075 Sum_probs=54.5
Q ss_pred hhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccccccCC--CCCCCCeeEEeccC
Q 020623 190 ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAG--PSIFGFVNSLIGIR 267 (323)
Q Consensus 190 ~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~kSe--P~~~g~v~~vVg~~ 267 (323)
.+.++.+|+ . ..|.++| +++|.... ..++.+++.+|++++++ +.++++|+ |..... .++|.+
T Consensus 40 ~~~a~~~gi-~--gvP~fvi---ngk~~~~~------~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~--~~~g~~ 103 (197)
T 1un2_A 40 EKAAADVQL-R--GVPAMFV---NGKYQLNP------QGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ--YEDGKQ 103 (197)
T ss_dssp HHHHHHTTC-C--SSSEEEE---TTTEEECG------GGSCCSSHHHHHHHHHH--HHHHHTC-----------CCBTTT
T ss_pred HHHHHHcCC-C--cCCEEEE---cceEecCc------cccccccHHHHHHHHHH--HHHHHHhCcccccccc--cCCCCC
Confidence 345678899 3 5899977 66776531 23566789999999999 99999998 443311 346777
Q ss_pred cceehHH---HHHHHHHHHHhcCCC
Q 020623 268 SVYIIVF---MVAMLMLLRTLGKDD 289 (323)
Q Consensus 268 ~~~iv~~---~~~~~~~~~~~~~~~ 289 (323)
+..+..- -+.++.+.-++||+|
T Consensus 104 y~~l~~p~~~~~~vveFf~~~C~~C 128 (197)
T 1un2_A 104 YTTLEKPVAGAPQVLEFFSFFCPHC 128 (197)
T ss_dssp EEECSSCCTTCCSEEEEECTTCHHH
T ss_pred ceEccCCCCCCCEEEEEECCCChhH
Confidence 6544321 145666777888888
No 226
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=94.99 E-value=0.2 Score=38.05 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=62.4
Q ss_pred CCCceecCChHHHHHHHHh-cCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeecc--cchhhHhhcCCCCC
Q 020623 26 APDVSILNSDAEVSDFVEN-AGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAKD--FSEDTMVLYDFDKV 94 (323)
Q Consensus 26 ~p~v~~i~s~~~l~~fl~~-~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~~--~~~~~~~~~~~~~~ 94 (323)
...+..++ .+++++.+.. .+. +++|-|... .+.+.+++.++.+ +.|...+. ...+++.++++...
T Consensus 17 ~~~v~~l~-~~~~~~~~~~~~~~--~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVN-KDTFWPIVKAAGDK--PVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVV 92 (124)
T ss_dssp TTSEEEEC-TTTHHHHHHHTTTS--CEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSS
T ss_pred CCceEEec-chhHHHHHHhcCCC--EEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCee
Confidence 34577785 4778877764 222 567777543 2467788888763 55554432 34678889999999
Q ss_pred CeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 95 PALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 95 p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|++++++++ .....+.|.. .++|.+||.+.
T Consensus 93 Pt~~~~~~G-~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 93 PTFKILKEN-SVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SEEEEEETT-EEEEEEESSC-HHHHHHHHHHH
T ss_pred eEEEEEeCC-cEEEEEcCCC-HHHHHHHHHHh
Confidence 999998752 1122355764 78899999864
No 227
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=94.97 E-value=0.2 Score=39.33 Aligned_cols=96 Identities=13% Similarity=0.131 Sum_probs=58.2
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcch-----------------------hhHhhhcCCc
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF-----------------------ADFADTFEAN 199 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~-----------------------~~~~~~~gl~ 199 (323)
.++++++.|... .-..-......|.++++++++ +.|+.++.+.. ..+.+.||+
T Consensus 27 ~gk~vll~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v- 104 (154)
T 3kcm_A 27 KGQVVIVNFWAT-WCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT- 104 (154)
T ss_dssp TTSEEEEEEECT-TCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC-
T ss_pred CCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC-
Confidence 356777777653 222335666788888888875 77777776532 125566788
Q ss_pred CCCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 200 KKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 200 ~~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
...|.+++++.+++ +... | ....+.+.+.++|+.+..+.-.+.
T Consensus 105 --~~~P~~~lid~~G~i~~~~~-g----~~~~~~~~l~~~l~~l~~~~~~~~ 149 (154)
T 3kcm_A 105 --TGVPETFVIDRHGVILKKVV-G----AMEWDHPEVIAFLNNELSKAREGH 149 (154)
T ss_dssp --CSBCEEEEECTTSBEEEEEE-S----CCCTTSHHHHHHHHTC--------
T ss_pred --CCCCeEEEECCCCcEEEEEc-C----CCccccHHHHHHHHHHHHHhhhcc
Confidence 57899999998764 3222 3 123467899999998877655443
No 228
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=94.88 E-value=0.091 Score=41.03 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=62.9
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
.+..|++.++++.+++...- .+++|-|... ...+.+++..+ .+.|..++ +...+++.+|++...|+++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~-k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 97 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQN-SSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTFE 97 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CC-SEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cEEEecChhHHHHHHHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEEE
Confidence 47888888999998876531 1567777543 23566666555 34554442 2356788899999999999
Q ss_pred Eec--CCCC-CCccccCCCCHHHHHHHHHhhc
Q 020623 99 ALQ--PSYN-EHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 99 v~k--~~~~-~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
+|+ ++.. ....+.|. +.++|.+||....
T Consensus 98 ~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 98 FYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp EEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred EEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 996 3211 12235576 7889999998753
No 229
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=94.83 E-value=0.23 Score=38.57 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=55.3
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhC-CC--eEEEEEcCcc-------------------------hhhHhhhcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASAN-RE--LVFCYVGIKQ-------------------------FADFADTFE 197 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~-~~--l~F~~vd~~~-------------------------~~~~~~~~g 197 (323)
++++++.|.... =..-......|.++++++ ++ +.|+.++.+. ...++..||
T Consensus 33 gk~vll~F~~~~-C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 33 NRYLLLNFWASW-CDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TSEEEEEEECGG-GCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CcEEEEEEECCC-CHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 466666665421 111245556777788877 43 7777665543 225667888
Q ss_pred CcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 198 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 198 l~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
+ ...|.++++|.+++.... ..+.+.+.++++.+++.
T Consensus 112 v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 112 I---LTLPTNILLSPTGKILAR--------DIQGEALTGKLKELLKT 147 (148)
T ss_dssp C---CSSSEEEEECTTSBEEEE--------SCCHHHHHHHHHHHC--
T ss_pred C---CCcCEEEEECCCCeEEEe--------cCCHHHHHHHHHHHHcc
Confidence 8 578999999988754332 12778899999988653
No 230
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=94.73 E-value=0.35 Score=38.17 Aligned_cols=90 Identities=8% Similarity=-0.010 Sum_probs=57.0
Q ss_pred CCcEEEEEEeCCChhHHHH-HHHHHHHHHHhCCC--eEEEEEcCc----------------------------chhh---
Q 020623 146 KRKIVLAIVEDETEEKSQK-LVTTLKAAASANRE--LVFCYVGIK----------------------------QFAD--- 191 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~-~~~~l~~~A~~~~~--l~F~~vd~~----------------------------~~~~--- 191 (323)
++++++.|.... =..-.. ....|.++++++++ +.|+.++.+ ....
T Consensus 30 gk~vlv~F~a~~-C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 30 GKVVVVEVFQML-CPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TSEEEEEEECTT-CHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCEEEEEEEcCC-CcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 467766666531 122344 46778888888874 777766531 0111
Q ss_pred ---HhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 192 ---FADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 192 ---~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
+++.||+ ...|.++++|.+++....- .+..+.+.+.++|+.+++.
T Consensus 109 ~~~~~~~~~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRL---EGTPSIILADRKGRIRQVQ-----FGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTC---CSSSEEEEECTTSBEEEEE-----ESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhccc---CccceEEEECCCCcEEEEe-----cCcCCHHHHHHHHHHHHhc
Confidence 5566777 4689999999876432210 1346788999999999875
No 231
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=94.49 E-value=0.29 Score=37.10 Aligned_cols=88 Identities=11% Similarity=0.057 Sum_probs=55.9
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCc----------------------------chhhHhhh
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK----------------------------QFADFADT 195 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~----------------------------~~~~~~~~ 195 (323)
.++++++.|.... =..-......|.++++++++ +.++.++.. ....+.+.
T Consensus 21 ~gk~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASW-CSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTT-CHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCc-CHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 3577776666421 12345666788888888775 888877321 01235567
Q ss_pred cCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 196 FEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 196 ~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
||+ ...|.++++|.+++..... .+..+.+.+.++|+.+
T Consensus 100 ~~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGV---RSYPTQAFIDKEGKLVKTH-----PGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTC---CSSSEEEEECTTCCEEEEE-----ESCCCHHHHHHHHHHC
T ss_pred cCc---ccCCeEEEECCCCcEEEee-----cCCCcHHHHHHHHHhh
Confidence 777 5689999999876432210 2346788899888763
No 232
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=94.32 E-value=0.15 Score=39.81 Aligned_cols=93 Identities=8% Similarity=0.014 Sum_probs=63.4
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec----------ccchhhHhhc
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK----------DFSEDTMVLY 89 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~----------~~~~~~~~~~ 89 (323)
.+..+ +.+++++.++. . ++|-|... ...+.+++.++. +.|...+ +...+++.+|
T Consensus 17 ~v~~l-~~~~~~~~~~~-~----vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~ 88 (135)
T 3emx_A 17 RLIYI-TPEEFRQLLQG-D----AILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKA 88 (135)
T ss_dssp EEEEC-CHHHHHHHHTS-S----EEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ceeec-CHHHHHHHhCC-c----EEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHc
Confidence 46677 67999998876 2 56666532 246778887775 5454432 1245677799
Q ss_pred CCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhcCC
Q 020623 90 DFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 129 (323)
Q Consensus 90 ~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~~P 129 (323)
++...|++++++++ .....+.|..+.+.+.+||+...-+
T Consensus 89 ~v~~~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 89 GVEGTPTLVFYKEG-RIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp TCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHC--
T ss_pred CCceeCeEEEEcCC-EEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 99999999999842 2223466888999999999887643
No 233
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.24 E-value=0.27 Score=39.31 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=57.4
Q ss_pred CCCcEEEEEE-eCCChhHHHHHHHHH---HHHHHhCCC-eEEEEEcCcch-----------hhHhhhcCCcCCCCCCeEE
Q 020623 145 DKRKIVLAIV-EDETEEKSQKLVTTL---KAAASANRE-LVFCYVGIKQF-----------ADFADTFEANKKSKLPKMV 208 (323)
Q Consensus 145 ~~~~~v~~f~-~~~~~e~~~~~~~~l---~~~A~~~~~-l~F~~vd~~~~-----------~~~~~~~gl~~~~~~P~iv 208 (323)
.++++++.|. .. -=..=..+...| .++++.+.. +.++.+|.+.. ..+++.||+ ...|.++
T Consensus 46 ~gk~vlv~F~ga~-wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v---~~~Pt~~ 121 (154)
T 2ju5_A 46 DHKPIGLFFTGSD-WCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV---TGFPELV 121 (154)
T ss_dssp HCCCEEEEEECTT-TCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC---CSSSEEE
T ss_pred CCCeEEEEEeCCC-CCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCC---CCCCEEE
Confidence 3578877776 42 112223344444 555554433 88999998653 256788999 4699999
Q ss_pred EEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 209 VWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 209 I~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++|.+++.....|. .+.+.+.+.++|+.++..
T Consensus 122 ~~d~~G~~~~~~G~----~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 122 FIDAEGKQLARMGF----EPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp EECTTCCEEEEECC----CTTCHHHHHHHHHHHHTC
T ss_pred EEcCCCCEEEEecC----CCCCHHHHHHHHHHHHhc
Confidence 99987643221131 123788999999988764
No 234
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.24 E-value=0.45 Score=37.52 Aligned_cols=91 Identities=8% Similarity=-0.025 Sum_probs=58.0
Q ss_pred CCcEEEEEEeCCChhHHHHH-HHHHHHHHHhCCC--eEEEEEcCc----------------------------chh----
Q 020623 146 KRKIVLAIVEDETEEKSQKL-VTTLKAAASANRE--LVFCYVGIK----------------------------QFA---- 190 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~-~~~l~~~A~~~~~--l~F~~vd~~----------------------------~~~---- 190 (323)
++++++.|.... =..-... ...|.++++++++ +.|+.++.+ ...
T Consensus 28 gk~vlv~f~a~w-C~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 28 GKVIVIEAFQML-CPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TSEEEEEEECTT-CHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCEEEEEEECCc-CcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 567776666521 1223443 6788888888873 777766531 001
Q ss_pred -hHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 191 -DFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 191 -~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
.+++.||+ ...|.++++|.+++....- .+..+.+.+.++|+.+++..
T Consensus 107 ~~~~~~~~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 107 PRTMAAYQM---RGTPSLLLIDKAGDLRAHH-----FGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp CHHHHHTTC---CSSSEEEEECTTSEEEEEE-----ESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHcCC---CCCCEEEEECCCCCEEEEE-----eCCCCHHHHHHHHHHHhccC
Confidence 35566777 4689999999887432210 13467889999999998754
No 235
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=94.00 E-value=0.23 Score=37.99 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=50.4
Q ss_pred cEEEEecCC--------hhHH---HHHHHhhcCceeEEeecc---cchhhHhhcCCCCCCeEEEecCCCCC-CccccCCC
Q 020623 50 PLFIGFGLD--------ESVM---SNLALKYKKKAWFAVAKD---FSEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPF 114 (323)
Q Consensus 50 ~~vVgf~~~--------~~~f---~~~A~~~~~~~~F~~~~~---~~~~~~~~~~~~~~p~ivv~k~~~~~-~~~y~g~~ 114 (323)
+++|-|... ...+ ..++..+...+.+...+. ...+++.+|++...|+++++.+ .++ ...+.|..
T Consensus 29 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~-~G~~~~~~~G~~ 107 (130)
T 2kuc_A 29 LLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINS-SGEVVYRLVGAE 107 (130)
T ss_dssp CEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECT-TSCEEEEEESCC
T ss_pred eEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECC-CCcEEEEecCCC
Confidence 567777542 1233 345544444454544421 2456788999989999999953 122 22456888
Q ss_pred CHHHHHHHHHhhcCC
Q 020623 115 DEEFLEEFIKQNFLP 129 (323)
Q Consensus 115 ~~~~L~~fI~~~~~P 129 (323)
+.++|.+||+...-|
T Consensus 108 ~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 108 DAPELLKKVKLGVES 122 (130)
T ss_dssp CHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHh
Confidence 899999999987655
No 236
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=93.97 E-value=0.29 Score=37.64 Aligned_cols=89 Identities=15% Similarity=0.212 Sum_probs=56.6
Q ss_pred CChHHHHHHHH----hcCCcccEEEEecCC--------hhHHH--HHHHhhcCceeEEeec----ccchhhHhhcCC---
Q 020623 33 NSDAEVSDFVE----NAGTFFPLFIGFGLD--------ESVMS--NLALKYKKKAWFAVAK----DFSEDTMVLYDF--- 91 (323)
Q Consensus 33 ~s~~~l~~fl~----~~~~~~~~vVgf~~~--------~~~f~--~~A~~~~~~~~F~~~~----~~~~~~~~~~~~--- 91 (323)
.+..++++.+. .++ +++|-|... ...+. +++..+.+.+.|..++ +...+++.+|++
T Consensus 13 ~~~~~~~~~~~~~~~~~k---~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~ 89 (133)
T 3fk8_A 13 DAWTQVKKALAAGKRTHK---PTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQ 89 (133)
T ss_dssp CHHHHHHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGG
T ss_pred ChHhHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccC
Confidence 34455555443 344 567777542 23677 7777776666665543 345678889999
Q ss_pred CCCCeEEEecCCCCC-CccccC-------CCCHHHHHHHHHh
Q 020623 92 DKVPALVALQPSYNE-HNIFYG-------PFDEEFLEEFIKQ 125 (323)
Q Consensus 92 ~~~p~ivv~k~~~~~-~~~y~g-------~~~~~~L~~fI~~ 125 (323)
...|+++++.+ .++ ...+.| ..+.+.|.+||+.
T Consensus 90 ~~~Pt~~~~d~-~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 90 DGIPAVVVVNS-DGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp GCSSEEEEECT-TSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred CccceEEEECC-CCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 89999999943 122 222334 4578899999975
No 237
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=92.86 E-value=0.011 Score=43.41 Aligned_cols=93 Identities=20% Similarity=0.329 Sum_probs=58.0
Q ss_pred ceecCChHHHHHHH-HhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEE
Q 020623 29 VSILNSDAEVSDFV-ENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALV 98 (323)
Q Consensus 29 v~~i~s~~~l~~fl-~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~iv 98 (323)
+..++ .+++.+.+ +.++ +++|-|... ...+.+++..+.+++.|...+ +...+++.++++...|+++
T Consensus 3 v~~l~-~~~~~~~~~~~~~---~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 2yj7_A 3 VIEVT-DENFEQEVLKSDK---PVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLL 78 (106)
Confidence 45564 35555433 4444 456666432 235677777776556555442 2245677889988899999
Q ss_pred EecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 99 ALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 99 v~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++ .....+.|..+.+.|.+||.+.
T Consensus 79 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNG-QVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99542 2233466877788899998753
No 238
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=93.59 E-value=0.29 Score=34.06 Aligned_cols=62 Identities=21% Similarity=0.213 Sum_probs=45.7
Q ss_pred hHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 60 SVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 60 ~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..+.+++.++.+++.|...+ +.+.+++.++++...|++++ + ++. .+.|..+.+.|.+||.+.
T Consensus 22 ~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~--G~~-~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 22 RVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--N--GDV-EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp HHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--T--TEE-ECCSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--C--CEE-eeecCCCHHHHHHHHHHh
Confidence 47788888887677776553 23456788899988999988 3 222 567877889999999864
No 239
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=92.45 E-value=0.015 Score=45.05 Aligned_cols=92 Identities=10% Similarity=0.083 Sum_probs=59.2
Q ss_pred cCCCcEEEEEEeCCChhHHHHHHHHH---HHHHHhCCC-eEEEEEcCc--chhhHhhhcCCcCCCCCCeEEEEeC-Ccce
Q 020623 144 DDKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDG-NENY 216 (323)
Q Consensus 144 ~~~~~~v~~f~~~~~~e~~~~~~~~l---~~~A~~~~~-l~F~~vd~~--~~~~~~~~~gl~~~~~~P~ivI~~~-~~kY 216 (323)
..++++++.|... .=..-..+...+ .++++.+++ +.|+.+|.+ ....+++.||+ ..+|.++++++ +++.
T Consensus 17 ~~~k~vlv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 17 AHGRMVMVYFHSE-HCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRV---PGTPTFVFLVPKAGAW 92 (130)
Confidence 3456666656542 111123444555 677777776 888888884 44567888998 57999999975 3443
Q ss_pred ---eeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 217 ---LTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 217 ---~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
... .+..+.+.|.+||+.++++.
T Consensus 93 ~~~~~~------~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 93 EEVGRL------FGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 111 23456788999999887654
No 240
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=93.29 E-value=0.93 Score=35.39 Aligned_cols=86 Identities=9% Similarity=0.214 Sum_probs=51.6
Q ss_pred CCcEEEEEEeCCChhH--HHHHHHHHHHHHHhC-C--CeEEEEEcCcch-------------------------hhHhhh
Q 020623 146 KRKIVLAIVEDETEEK--SQKLVTTLKAAASAN-R--ELVFCYVGIKQF-------------------------ADFADT 195 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~--~~~~~~~l~~~A~~~-~--~l~F~~vd~~~~-------------------------~~~~~~ 195 (323)
++++++.|....- .. -......|.++++++ + ++.|+.++.+.- ..+.+.
T Consensus 33 gk~vll~F~a~~C-~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 33 QKSLLINFWASWN-DSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TSEEEEEEECTTC-CCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCEEEEEEEeCCC-CchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4566555554211 12 344556666666666 3 366655554422 145667
Q ss_pred cCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 196 FEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 196 ~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
||+ ...|.++++|.+++.... ..+.+.+.+.|+.+++
T Consensus 112 ~~v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSI---YKIPANILLSSDGKILAK--------NLRGEELKKKIENIVE 148 (150)
T ss_dssp TTC---CSSSEEEEECTTSBEEEE--------SCCHHHHHHHHHHHHH
T ss_pred cCC---CccCeEEEECCCCEEEEc--------cCCHHHHHHHHHHHHh
Confidence 787 478999999998754332 1367888888887764
No 241
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=93.16 E-value=0.41 Score=33.30 Aligned_cols=62 Identities=19% Similarity=0.201 Sum_probs=46.1
Q ss_pred hHHHHHHHhhcCceeEEeec-ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 60 SVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 60 ~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..+.+++.++.+.+.|...+ +.+.+++.++++...|++++ + ++. .+.|..+.+.|.+||.+.
T Consensus 21 ~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~--G~~-~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 21 EVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--N--GVV-RFVGAPSREELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--T--TTE-EEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--C--CEE-EEccCCCHHHHHHHHHHH
Confidence 47788888887777776553 23557888999988999988 3 222 567877888999999865
No 242
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=93.15 E-value=0.68 Score=37.65 Aligned_cols=92 Identities=11% Similarity=0.082 Sum_probs=54.8
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--e------EEEEEcCcc-h----hhHhhhcCCc-------------
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--L------VFCYVGIKQ-F----ADFADTFEAN------------- 199 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l------~F~~vd~~~-~----~~~~~~~gl~------------- 199 (323)
++++++.|.... =..-......|+++++++++ + .|+.++.+. . .++++.++++
T Consensus 59 gk~vlv~F~a~~-C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 59 NQVVILNAWGQW-CAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TSEEEEEEECTT-CHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCEEEEEEECCc-CHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 467777666521 12234555667777777653 6 888887765 2 2333333320
Q ss_pred -----CCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 200 -----KKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 200 -----~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.....|.+++++.+++....- .+..+.+.|.++|+.+++
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVF-----LREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEE-----CSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEE-----cCCCCHHHHHHHHHHHHh
Confidence 125689999999876432210 234688999999998875
No 243
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=93.10 E-value=1.1 Score=36.27 Aligned_cols=94 Identities=10% Similarity=0.091 Sum_probs=57.4
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC--CeEEEEEcCcch-----hhHhhhcCCcC------------------
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQF-----ADFADTFEANK------------------ 200 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~--~l~F~~vd~~~~-----~~~~~~~gl~~------------------ 200 (323)
++++++.|....- ..-......|++++++++ ++.++.++.+.. ..+++.+++ .
T Consensus 60 gk~vll~F~a~~C-~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 60 GKTLLVNLWATWC-VPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANL-TRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TSEEEEEEECTTC-HHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTC-CTTCCEECTTCHHHHHHHT
T ss_pred CCEEEEEEEeCCC-HhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCC-CCCceEECCcchHHHHhcc
Confidence 4677776765211 233456677888888876 366666665421 345565555 2
Q ss_pred ---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCcc
Q 020623 201 ---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 201 ---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
....|.++++|.+++ +.+. |. ...+.+.|.++|+..++++.
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~-g~----~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIA-GP----AEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEE-SC----CCTTSHHHHHHHHHHHC---
T ss_pred ccccCCCCEEEEECCCCCEEEEEe-cC----CccCHHHHHHHHHHHhcccc
Confidence 026899999998764 3332 31 22457899999999988754
No 244
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=92.97 E-value=1.4 Score=34.76 Aligned_cols=67 Identities=10% Similarity=0.181 Sum_probs=48.1
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC--CeEEEEEcCcc-------------------hhhHhhhcCCcCCCC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------FADFADTFEANKKSK 203 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~--~l~F~~vd~~~-------------------~~~~~~~~gl~~~~~ 203 (323)
.++++++.|... .-..-......|.+++++++ ++.|+.++.+. ...+.+.||+ ..
T Consensus 40 ~gk~vll~F~~~-~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~ 115 (158)
T 3hdc_A 40 RGKIVLVNFWAS-WCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGA---NR 115 (158)
T ss_dssp TTSEEEEEEECT-TCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTC---CS
T ss_pred CCCEEEEEEECC-cCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCC---CC
Confidence 357777777753 12234567788999999997 38888888764 2356678888 57
Q ss_pred CCeEEEEeCCcc
Q 020623 204 LPKMVVWDGNEN 215 (323)
Q Consensus 204 ~P~ivI~~~~~k 215 (323)
.|.++++|.+++
T Consensus 116 ~P~~~lid~~G~ 127 (158)
T 3hdc_A 116 LPDTFIVDRKGI 127 (158)
T ss_dssp SSEEEEECTTSB
T ss_pred cceEEEEcCCCC
Confidence 899999998763
No 245
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=92.75 E-value=0.43 Score=45.86 Aligned_cols=110 Identities=9% Similarity=0.123 Sum_probs=76.8
Q ss_pred CeeecChhhHHHhhcCC--CcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---C------eEEEEEcCcchhhHhhhcCC
Q 020623 130 LSVPINQDTLNLLKDDK--RKIVLAIVEDETEEKSQKLVTTLKAAASANR---E------LVFCYVGIKQFADFADTFEA 198 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~--~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~------l~F~~vd~~~~~~~~~~~gl 198 (323)
.+..++.+++..+.... +++++.|... -=..-+.+...+.++|+.++ + +.|+.+|.+..+.+++.|++
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~-WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYND-GCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECT-TCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECC-CCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 57888988998776543 6777777752 11334677789999999987 2 99999999988889999999
Q ss_pred cCCCCCCeEEEEeCCc-----ceeeccCCCC------CCCCCCHHHHHHHHHHHHcCcc
Q 020623 199 NKKSKLPKMVVWDGNE-----NYLTVIGSES------IDEEDQGSQISRFLEGYREGRT 246 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~~-----kY~~~~~~~~------~~~~~t~~~I~~Fi~~~~~Gkl 246 (323)
..+|.+++++..+ +|. |..+ +...++.+.+.+.++.+++.++
T Consensus 103 ---~~~PTlilf~~gg~~~~~~y~---G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~ 155 (470)
T 3qcp_A 103 ---NFVPRLFFFYPRDSCRSNEEC---GTSSLEHVAFENSHLEVDELESEVRRLVNKHM 155 (470)
T ss_dssp ---CSSCEEEEEEESSCCCTTSCC---CCCCEEEEECSCTTCCHHHHHHHHHHHHHHHC
T ss_pred ---CccCeEEEEECCCceEEEEee---CCCCHHHHHHHHHhcCHHHHHHHHHHHhhhcc
Confidence 5799999986422 221 2111 1223677777777777765554
No 246
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=92.67 E-value=0.62 Score=36.83 Aligned_cols=105 Identities=6% Similarity=0.014 Sum_probs=61.3
Q ss_pred CeeecChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC--CeEEEEEcCc--------------------
Q 020623 130 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIK-------------------- 187 (323)
Q Consensus 130 lv~~~t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~--~l~F~~vd~~-------------------- 187 (323)
.+...+.+.+..-...++++++.|... .=..-......|.+++++++ ++.|+.+..+
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~-~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWAS-WCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCT-TCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 344444444443323456777666542 11223556677888888754 3555555421
Q ss_pred --------chhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 188 --------QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 188 --------~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
....+++.||+ ...|.++++|.+++....- .+..+.+.|.++|+..++
T Consensus 101 ~~~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNI---SVYPSWALIGKDGDVQRIV-----KGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTSCEEECTTCHHHHHTTC---CSSSEEEEECTTSCEEEEE-----ESCCCHHHHHHHHHCTTC
T ss_pred CcceEEEcCchHHHHHcCC---CccceEEEECCCCcEEEEE-----cCCCCHHHHHHHHHHHHH
Confidence 11234556777 4689999999876432210 134678999999998875
No 247
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=92.46 E-value=0.35 Score=37.46 Aligned_cols=67 Identities=18% Similarity=0.183 Sum_probs=39.0
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchhh-------------------------HhhhcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-------------------------FADTFEA 198 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~~-------------------------~~~~~gl 198 (323)
++++++.|.... -..-......|.++++++++ +.|+.++.+.... +...||+
T Consensus 31 gk~vll~f~~~~-C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 31 AKYTILFFWDSQ-CGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CSEEEEEEECGG-GCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCEEEEEEECCC-CccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 466666565421 01112344556666666653 7777766653222 5566777
Q ss_pred cCCCCCCeEEEEeCCcce
Q 020623 199 NKKSKLPKMVVWDGNENY 216 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~~kY 216 (323)
...|.++++|.+++-
T Consensus 110 ---~~~P~~~lid~~G~i 124 (148)
T 3hcz_A 110 ---YATPVLYVLDKNKVI 124 (148)
T ss_dssp ---CSSCEEEEECTTCBE
T ss_pred ---CCCCEEEEECCCCcE
Confidence 468999999987743
No 248
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=92.41 E-value=0.76 Score=35.89 Aligned_cols=88 Identities=7% Similarity=-0.002 Sum_probs=51.5
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcc-----------------------hhhHhhhcCCcCCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS 202 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~-----------------------~~~~~~~~gl~~~~ 202 (323)
++++++.|.... =..-......|++++++ .++.|+.++.+. ...+...||+ .
T Consensus 42 gk~~ll~f~~~~-C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~ 116 (156)
T 1kng_A 42 GKVSLVNVWASW-CVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV---Y 116 (156)
T ss_dssp TSCEEEEEECTT-CHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC---C
T ss_pred CCEEEEEEEccc-CHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc---C
Confidence 466666665421 12234455666666655 336666655421 1234566777 4
Q ss_pred CCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 203 KLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
..|.+++++.+++....- .+..+.+.+.++++.+++
T Consensus 117 ~~P~~~~id~~G~i~~~~-----~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKL-----VGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBEEEEE-----ESCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCEEEEE-----eCCCCHHHHHHHHHHHHH
Confidence 689989998876432210 134577889998888764
No 249
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=92.36 E-value=0.73 Score=37.63 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=56.6
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcc-----------------------------hhhHhhh
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQ-----------------------------FADFADT 195 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~-----------------------------~~~~~~~ 195 (323)
++++++.|.... =..-......|+++++++++ +.|+.++.+. ...+.+.
T Consensus 33 gk~vlv~F~a~~-C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNH-CPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSS-CHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCC-CccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 355555555421 11223344566667777766 6666665421 1234556
Q ss_pred cCCcCCCCCCeEEEEeCCcceeeccCCCC----CCCCCCHHHHHHHHHHHHcCcccc
Q 020623 196 FEANKKSKLPKMVVWDGNENYLTVIGSES----IDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 196 ~gl~~~~~~P~ivI~~~~~kY~~~~~~~~----~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
||+ ...|.++++|.+++.... |..+ ..+..+.+.|.+.|+.+++|+-.+
T Consensus 112 ~~v---~~~P~~~lid~~G~i~~~-g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 164 (188)
T 2cvb_A 112 YRA---LRTPEVFLFDERRLLRYH-GRVNDNPKDPSKVQSHDLEAAIEALLRGEEPP 164 (188)
T ss_dssp TTC---CEESEEEEECTTCBEEEE-ECSSSCTTCGGGCCCCHHHHHHHHHHTTCCCC
T ss_pred cCC---CCCCeEEEECCCCcEEEE-EecCCccccccccCHHHHHHHHHHHHcCCCCC
Confidence 777 467999999987743332 2110 012246789999999999886543
No 250
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=92.30 E-value=0.22 Score=40.44 Aligned_cols=99 Identities=10% Similarity=0.130 Sum_probs=57.8
Q ss_pred cCCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC-eEEEEEcCcchhh-HhhhcCCcCCCCCCeEEEEeCCcceee-cc
Q 020623 144 DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFAD-FADTFEANKKSKLPKMVVWDGNENYLT-VI 220 (323)
Q Consensus 144 ~~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~-~~~~~gl~~~~~~P~ivI~~~~~kY~~-~~ 220 (323)
..++|+++.|... -=..-..+...|.++++.+.. +.|+.++.+..+. ....+++ ....+|.+++++.+++-.. ..
T Consensus 44 ~~~k~vlv~F~a~-WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~-~~~~~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 44 ASGLPLMVIIHKS-WCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSP-DGGYIPRILFLDPSGKVHPEII 121 (164)
T ss_dssp HHTCCEEEEEECT-TCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCT-TCSCSSEEEEECTTSCBCTTCC
T ss_pred hcCCeEEEEEECC-CCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcc-cCCcCCeEEEECCCCCEEEEEe
Confidence 3467887777652 112234455566666555443 6667777765544 5667777 5566999999987653211 11
Q ss_pred CCCCCC----CCCCHHHHHHHHHHHHcC
Q 020623 221 GSESID----EEDQGSQISRFLEGYREG 244 (323)
Q Consensus 221 ~~~~~~----~~~t~~~I~~Fi~~~~~G 244 (323)
|..... ...+.+.|.++|+.+++.
T Consensus 122 G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 122 NENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp CTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred CCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 211100 025788999999888754
No 251
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=91.98 E-value=0.86 Score=37.35 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=34.8
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcceeec-cCCCC---CCCCCCHHHHHHHHHHHHcCcccc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNENYLTV-IGSES---IDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~kY~~~-~~~~~---~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
.+.+.||+ ...|.++++|.+++.... ..... ..+..+.+.|.+.|+.+++++-.+
T Consensus 121 ~~~~~~~v---~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 179 (196)
T 2ywi_A 121 EVAKAYDA---ACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVP 179 (196)
T ss_dssp HHHHHHTC---CEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCC
T ss_pred HHHHHhCC---CCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCC
Confidence 34566777 467999999987642221 00000 123467899999999999875443
No 252
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=91.91 E-value=1.3 Score=36.16 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=52.0
Q ss_pred ecChhhHHHhhcC-CCcEEEEEEeCCCh-hHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEE
Q 020623 133 PINQDTLNLLKDD-KRKIVLAIVEDETE-EKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 210 (323)
Q Consensus 133 ~~t~~~~~~~~~~-~~~~v~~f~~~~~~-e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~ 210 (323)
.++.+....+-.. ++++++.|.. +. ..-......|.+++..++++.|+.+|.++.+..+..|+-......|.++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A--~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGE--MWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECC--TTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHHHHHHhCCCEEEEEEEC--CCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 3555555555432 3455555543 21 234566788899999988899999998876666666651112679999999
Q ss_pred eCCc
Q 020623 211 DGNE 214 (323)
Q Consensus 211 ~~~~ 214 (323)
+.++
T Consensus 118 ~~~G 121 (167)
T 1z6n_A 118 DEEF 121 (167)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 9764
No 253
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=91.24 E-value=0.48 Score=32.36 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=42.4
Q ss_pred hHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEEecCCCCCCccccCCC-CHHHHHHHH
Q 020623 60 SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPF-DEEFLEEFI 123 (323)
Q Consensus 60 ~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~-~~~~L~~fI 123 (323)
..+.+++..+..++.+...+ +.+++.++++...|++++ + +..++.|.. +.++|.+||
T Consensus 19 ~~l~~~~~~~~~~~~~~~v~--~~~~~~~~~v~~~Pt~~~--~---G~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 19 KNAREAVKELGIDAEFEKIK--EMDQILEAGLTALPGLAV--D---GELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHTTCCEEEEEEC--SHHHHHHHTCSSSSCEEE--T---TEEEECSSCCCHHHHHHHC
T ss_pred HHHHHHHHHcCCceEEEEec--CHHHHHHCCCCcCCEEEE--C---CEEEEcCCCCCHHHHHHHh
Confidence 46778888887667666554 677888999988999988 2 333344876 889999886
No 254
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=91.15 E-value=0.93 Score=36.47 Aligned_cols=43 Identities=28% Similarity=0.199 Sum_probs=28.4
Q ss_pred hhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCC-HHHHHHHHHHHHc
Q 020623 193 ADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQ-GSQISRFLEGYRE 243 (323)
Q Consensus 193 ~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t-~~~I~~Fi~~~~~ 243 (323)
...||+ ...|.++++|.+++-.... .+..+ .+.+.+|++..++
T Consensus 123 ~~~~~v---~~~Pt~~lid~~G~~~~~~-----~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 123 RVKFGA---NAQPFYVLIDNEGNPLNKS-----YAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp HHHHSC---CCSSEEEEECTTSCBSSCC-----BCSCCCHHHHHHHHHHHHH
T ss_pred HHHcCC---CCcceEEEECCCCCEEeec-----cCCCCCHHHHHHHHHHHHH
Confidence 567888 5799999999876322110 12345 7888888877654
No 255
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=91.08 E-value=1.2 Score=35.44 Aligned_cols=45 Identities=11% Similarity=-0.014 Sum_probs=29.3
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+...||+ ...|..++++.+++....- .+..+.+.+.++|+..++
T Consensus 116 ~~~~~~~v---~~~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 116 MLGLDLGV---YGAPETFLIDGNGIIRYRH-----AGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHHHHHTC---CSSSEEEEECTTSBEEEEE-----ESCCCHHHHHHTTHHHHH
T ss_pred HHHHHcCc---cccCEEEEECCCCeEEEEE-----eCCCCHHHHHHHHHHHHH
Confidence 45566787 4689888899876432210 123677888888877764
No 256
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=90.86 E-value=1.5 Score=37.04 Aligned_cols=54 Identities=13% Similarity=0.285 Sum_probs=36.6
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcceeeccCCC-----CCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNENYLTVIGSE-----SIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~-----~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
.+.+.||+ ...|.++|+|.+++..+. +.. ......+.+.|.+.|+.+++|+-.+
T Consensus 134 ~~~~~~~v---~~~P~~~liD~~G~i~~~-g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 134 SVAKAYGA---ACTPDFFLYDRERRLVYH-GQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHHHHTC---CEESEEEEECTTCBEEEE-ECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred HHHHHcCC---CCCCeEEEECCCCcEEEe-ccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 45667787 467999999987743321 110 0123467899999999999997654
No 257
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=90.69 E-value=1 Score=34.68 Aligned_cols=37 Identities=14% Similarity=0.312 Sum_probs=26.6
Q ss_pred hcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 195 TFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 195 ~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.||+ ...|.++++|.+++-... ..+.+.|.++++...
T Consensus 104 ~~~v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDI---RATPTIYLLDGRKRVILK--------DTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCC---CSSSEEEEECTTCBEEEC--------SCCHHHHHHHHHC--
T ss_pred HcCC---CCCCeEEEECCCCCEEec--------CCCHHHHHHHHHHHc
Confidence 5677 578999999988754431 267899999998764
No 258
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=90.50 E-value=1.3 Score=30.03 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCC-eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCC-CHHHHHHHH
Q 020623 163 QKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED-QGSQISRFL 238 (323)
Q Consensus 163 ~~~~~~l~~~A~~~~~-l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~-t~~~I~~Fi 238 (323)
+.+...+.++++++.+ +.++.+| ....++.||+ ...|.+++ +++.... | .. +.+.|.+|+
T Consensus 15 ~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v---~~~Pt~~~---~G~~~~~-G------~~~~~~~l~~~l 76 (77)
T 1ilo_A 15 QMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGL---TALPGLAV---DGELKIM-G------RVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTC---SSSSCEEE---TTEEEEC-S------SCCCHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCC---CcCCEEEE---CCEEEEc-C------CCCCHHHHHHHh
Confidence 4566778889999886 9999998 3466788899 57899988 4443221 2 23 677887765
No 259
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=89.67 E-value=2.4 Score=34.27 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=29.6
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+...||+ ...|..+++|.+++ +... +..+.+.+.++|+.+++
T Consensus 123 ~~~~~~~v---~~~P~~~lid~~G~i~~~~~-------g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 123 TLGLDLGV---YGAPETYLIDKQGIIRHKIV-------GVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHHHTC---CSSCEEEEECTTCBEEEEEE-------SCCCHHHHHHHTHHHHH
T ss_pred hHHHHcCC---CCCCeEEEECCCCeEEEEEc-------CCCCHHHHHHHHHHHHH
Confidence 34556677 46899999998764 3332 23677888888888775
No 260
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=89.62 E-value=0.12 Score=49.81 Aligned_cols=85 Identities=26% Similarity=0.177 Sum_probs=56.8
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcC--------ceeEEeec-ccchhhHhhcC
Q 020623 28 DVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKK--------KAWFAVAK-DFSEDTMVLYD 90 (323)
Q Consensus 28 ~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~--------~~~F~~~~-~~~~~~~~~~~ 90 (323)
.|..++ .+++++++..+... +++|-|... .+.|.++|..+.+ .+.|+.++ +...+++.+|+
T Consensus 24 ~V~~Lt-~~~F~~~l~~~~~k-~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 24 SVVDLS-GDDFSRVHRVAPLC-PWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp TEEECS-CSCGGGTCTTGGGS-CEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CcEECC-HHHHHHHHHhCCCC-eEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 467774 47887777654211 577877653 2578899998862 46676653 23567889999
Q ss_pred CCCCCeEEEecCCCC-CCccccCCC
Q 020623 91 FDKVPALVALQPSYN-EHNIFYGPF 114 (323)
Q Consensus 91 ~~~~p~ivv~k~~~~-~~~~y~g~~ 114 (323)
+...|++++|+++.. ....|.|..
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r 126 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTS 126 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCC
T ss_pred CCccCeEEEEECCCceEEEEeeCCC
Confidence 999999999976432 244566653
No 261
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=88.46 E-value=2.7 Score=32.24 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=24.5
Q ss_pred hhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHH
Q 020623 193 ADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 239 (323)
Q Consensus 193 ~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~ 239 (323)
...|++ ...|.++++|.+++-... ..+.+.|.+|++
T Consensus 106 ~~~~~v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~ 141 (142)
T 3eur_A 106 KNLYDL---RAIPTLYLLDKNKTVLLK--------DATLQKVEQYLA 141 (142)
T ss_dssp TTCSCC---TTCSEEEEECTTCBEEEE--------EECHHHHHHHHH
T ss_pred hhhcCC---CcCCeEEEECCCCcEEec--------CCCHHHHHHHHh
Confidence 445566 468999999988753331 135688888875
No 262
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=88.37 E-value=3.2 Score=31.86 Aligned_cols=83 Identities=10% Similarity=0.160 Sum_probs=49.2
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcch--------------------------hhHhhhcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF--------------------------ADFADTFE 197 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~--------------------------~~~~~~~g 197 (323)
++++++.|...-- ..-......|.+++++|++ +.++.++.+.- ..+.+.||
T Consensus 32 gk~vll~F~a~wC-~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 32 GRYTLLNFWAAYD-AESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp CCEEEEEEECTTC-HHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCEEEEEEEcCcC-HHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4666666654211 2234556777888888763 66666554411 12345566
Q ss_pred CcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 198 ANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 198 l~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
+ ...|..+++|.+++-... ....+.+.++++.
T Consensus 111 v---~~~P~~~lid~~G~i~~~--------~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 111 L---RKGFKNFLINDEGVIIAA--------NVTPEKLTEILKA 142 (143)
T ss_dssp G---GGCCCEEEECTTSBEEEE--------SCCHHHHHHHHTC
T ss_pred C---CCCCcEEEECCCCEEEEc--------cCCHHHHHHHHHh
Confidence 6 367999999988754332 1456778777753
No 263
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=88.21 E-value=2.6 Score=32.99 Aligned_cols=66 Identities=8% Similarity=0.176 Sum_probs=40.8
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcchh-----------------------hHhhhcCCcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA-----------------------DFADTFEANK 200 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~~-----------------------~~~~~~gl~~ 200 (323)
++++++.|... .-..-......|.++++++++ +.++.++.+... .+...||+
T Consensus 35 gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v-- 111 (152)
T 2lrt_A 35 GKVVLIDFTVY-NNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV-- 111 (152)
T ss_dssp GSEEEEEEECT-TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC--
T ss_pred CCEEEEEEEcC-CChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc--
Confidence 36666666652 112234455667777777653 666666654322 15567787
Q ss_pred CCCCCeEEEEeCCcc
Q 020623 201 KSKLPKMVVWDGNEN 215 (323)
Q Consensus 201 ~~~~P~ivI~~~~~k 215 (323)
...|.++++|.+++
T Consensus 112 -~~~P~~~lid~~G~ 125 (152)
T 2lrt_A 112 -TNLPSVFLVNRNNE 125 (152)
T ss_dssp -CSCSEEEEEETTTE
T ss_pred -ccCceEEEECCCCe
Confidence 46899999998774
No 264
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=87.50 E-value=1.9 Score=35.45 Aligned_cols=76 Identities=11% Similarity=0.166 Sum_probs=45.1
Q ss_pred ChhhHHHhhcCCCcEEEEEEeCCChhHHHHHHH-H--HHHHHHhCCC-eEEEEEcCcchhhHhhhc--------CCcCCC
Q 020623 135 NQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVT-T--LKAAASANRE-LVFCYVGIKQFADFADTF--------EANKKS 202 (323)
Q Consensus 135 t~~~~~~~~~~~~~~v~~f~~~~~~e~~~~~~~-~--l~~~A~~~~~-l~F~~vd~~~~~~~~~~~--------gl~~~~ 202 (323)
+.+.+......++|+++-|...- =..=..+.. . ..++|+.+.+ +.++.+|.++.+.+...| |+ .
T Consensus 28 ~~ea~~~A~~~~KpVlvdF~A~W-C~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv---~ 103 (173)
T 3ira_A 28 GEEAFEKARKENKPVFLSIGYST-CHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGR---G 103 (173)
T ss_dssp SHHHHHHHHHHTCCEEEEEECTT-CHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSC---C
T ss_pred CHHHHHHHHHhCCCEEEecccch-hHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCC---C
Confidence 34556655556788877776421 011112221 1 1244444444 889999998766555444 77 5
Q ss_pred CCCeEEEEeCCc
Q 020623 203 KLPKMVVWDGNE 214 (323)
Q Consensus 203 ~~P~ivI~~~~~ 214 (323)
..|.++++++++
T Consensus 104 g~Pt~v~l~~dG 115 (173)
T 3ira_A 104 GWPLNIIMTPGK 115 (173)
T ss_dssp CSSEEEEECTTS
T ss_pred CCcceeeECCCC
Confidence 799999999765
No 265
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=87.45 E-value=2.4 Score=38.95 Aligned_cols=88 Identities=8% Similarity=0.078 Sum_probs=57.0
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcCcch---------------------------hhHhhhc
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF---------------------------ADFADTF 196 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~~~~---------------------------~~~~~~~ 196 (323)
++++++.|... .-..-......|.++++++++ +.|+.++.+.+ ..+++.|
T Consensus 82 GK~vLl~F~at-wC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 82 GKVVLIDFWAY-SCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TSEEEEEEECT-TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCEEEEEEECC-CChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 56777767652 112335566778888888763 77777764321 2344567
Q ss_pred CCcCCCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 197 EANKKSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 197 gl~~~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
++ ...|.++++|.+++ +... +..+.+.|.++|+.+++.
T Consensus 161 gV---~~~Pt~~lID~~G~Iv~~~~-------G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 161 RN---RYWPAEYLIDATGTVRHIKF-------GEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TC---CEESEEEEECTTSBEEEEEE-------SBCCHHHHHHHHHHHHHH
T ss_pred CC---CccCEEEEEeCCCeEEEEEc-------CCCCHHHHHHHHHHHHhh
Confidence 77 46799999998764 3221 235778999999998754
No 266
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=87.04 E-value=3.7 Score=31.45 Aligned_cols=68 Identities=10% Similarity=0.139 Sum_probs=44.7
Q ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---CeEEEEEcCcch------------------------hhHhhhcC
Q 020623 145 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFE 197 (323)
Q Consensus 145 ~~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~------------------------~~~~~~~g 197 (323)
.++++++.|... .=..-......|.+++++++ ++.++.++.+.- ..+.+.||
T Consensus 27 ~gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSAS-WCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECC-CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 356777766652 11233566678888888876 377777766531 24566778
Q ss_pred CcCCCCCCeEEEEe-CCcce
Q 020623 198 ANKKSKLPKMVVWD-GNENY 216 (323)
Q Consensus 198 l~~~~~~P~ivI~~-~~~kY 216 (323)
+ ...|.+++++ .+++.
T Consensus 106 v---~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 106 V---KSIPTLVGVEADSGNI 122 (144)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEECCCCcE
Confidence 8 4789999999 77654
No 267
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=86.68 E-value=3.9 Score=31.45 Aligned_cols=67 Identities=6% Similarity=0.122 Sum_probs=44.1
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---CeEEEEEcCcch------------------------hhHhhhcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFEA 198 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~------------------------~~~~~~~gl 198 (323)
++++++.|... .=..-......|.+++++++ ++.++.++.+.- ..+.+.||+
T Consensus 28 gk~vll~F~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 28 GKLVFFYFSAS-WCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TCEEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCEEEEEEEcc-CCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 56777666652 11233566678888888876 377777766531 245667888
Q ss_pred cCCCCCCeEEEEe-CCcce
Q 020623 199 NKKSKLPKMVVWD-GNENY 216 (323)
Q Consensus 199 ~~~~~~P~ivI~~-~~~kY 216 (323)
...|.+++++ .+++-
T Consensus 107 ---~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 107 ---ESIPTLIGVDADSGDV 122 (146)
T ss_dssp ---CSSSEEEEEETTTCCE
T ss_pred ---CCCCEEEEEECCCCeE
Confidence 4689999999 67643
No 268
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=86.67 E-value=3.6 Score=32.83 Aligned_cols=68 Identities=3% Similarity=0.119 Sum_probs=45.0
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---CeEEEEEcCcch------------------------hhHhhhcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFEA 198 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~------------------------~~~~~~~gl 198 (323)
++++++.|...- =..-......|.+++++++ ++.++.++.+.- ..+++.||+
T Consensus 48 gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 48 GKTVFFYFSASW-CPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TSEEEEEEECTT-CHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCc-ChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 567777676521 1234566678888888876 366666665432 345677888
Q ss_pred cCCCCCCeEEEEeCC-ccee
Q 020623 199 NKKSKLPKMVVWDGN-ENYL 217 (323)
Q Consensus 199 ~~~~~~P~ivI~~~~-~kY~ 217 (323)
..+|.++|++.+ ++..
T Consensus 127 ---~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 127 ---ESIPTLIGLNADTGDTV 143 (165)
T ss_dssp ---CSSSEEEEEETTTCCEE
T ss_pred ---CCCCEEEEEeCCCCEEE
Confidence 578999999986 7543
No 269
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=86.18 E-value=4.1 Score=31.10 Aligned_cols=67 Identities=7% Similarity=0.183 Sum_probs=43.6
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCC---CeEEEEEcCcch------------------------hhHhhhcCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFEA 198 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~---~l~F~~vd~~~~------------------------~~~~~~~gl 198 (323)
++++++.|... .=..-......|.+++++++ ++.++.++.+.- ..+.+.||+
T Consensus 28 gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 28 GKTVFLYFSAS-WCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TCEEEEEEECT-TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCEEEEEEECc-CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 56777766652 11223556677888888876 377776666531 235567788
Q ss_pred cCCCCCCeEEEEe-CCcce
Q 020623 199 NKKSKLPKMVVWD-GNENY 216 (323)
Q Consensus 199 ~~~~~~P~ivI~~-~~~kY 216 (323)
...|.+++++ .+++-
T Consensus 107 ---~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 107 ---ESIPTLITINADTGAI 122 (144)
T ss_dssp ---CSSSEEEEEETTTCCE
T ss_pred ---CCCCEEEEEECCCCeE
Confidence 4789999999 67643
No 270
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=85.92 E-value=3.3 Score=31.56 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=31.4
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+ +... .+.|..+.+.|.++|...
T Consensus 99 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 99 DHALTDAFENEYVPAYYVFDK--TGQLRHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp SCHHHHHTCCCCSSEEEEECT--TCBEEEEEESCSTTHHHHHHHHHH
T ss_pred chhHHHHhCCCCCCEEEEECC--CCcEEEEecCCCCHHHHHHHHHHH
Confidence 346778899988999999954 2333 345777788899988754
No 271
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=83.46 E-value=5.9 Score=29.33 Aligned_cols=42 Identities=12% Similarity=0.194 Sum_probs=32.0
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~ 125 (323)
+.+++..|++...|+++++.+ +... .+.|..+.++|.++|++
T Consensus 93 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 93 SGKLLETYGVRSYPTQAFIDK--EGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCHHHHHTTCCSSSEEEEECT--TCCEEEEEESCCCHHHHHHHHHH
T ss_pred chHHHHHcCcccCCeEEEECC--CCcEEEeecCCCcHHHHHHHHHh
Confidence 446778899988999999964 2333 45688889999999875
No 272
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=83.02 E-value=12 Score=27.75 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=32.9
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCcccc---CCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFY---GPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~---g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+. +....+. |..+.+.|.+||++.
T Consensus 88 ~~~~~~~~~i~~~P~~~lid~~-G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 88 DGVIWARYNVPWQPAFVFYRAD-GTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp TSHHHHHTTCCSSSEEEEECTT-SCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred chhHHHhcCCCCCCEEEEECCC-CcEEEEEcCCCccCHHHHHHHHHHH
Confidence 4567778998889999999652 2222567 888899999999864
No 273
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=83.02 E-value=8.5 Score=30.21 Aligned_cols=32 Identities=9% Similarity=-0.051 Sum_probs=22.2
Q ss_pred CeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 205 PKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 205 P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
|.++|+|++++ +.+. +..+.+.|.+.|+.+++
T Consensus 131 ~~~~lid~~G~i~~~~~-------g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 131 IAIYLLNPDGLFTDYYG-------RSRSAEQISDSVRRHMA 164 (171)
T ss_dssp CEEEEECTTSCEEEEEE-------SSCCHHHHHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEEC-------CCCCHHHHHHHHHHHHH
Confidence 48889998763 3332 23577888888888765
No 274
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=82.17 E-value=9.9 Score=29.80 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=27.5
Q ss_pred hHhhhcCCcCC--CCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 191 DFADTFEANKK--SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 191 ~~~~~~gl~~~--~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.+.+.||+ .+ ...|..+++|.+++ +... +. ....-..+.+.+.++....+
T Consensus 97 ~~~~~~~v-~~~~~~~P~~~lid~~G~i~~~~~-g~--~~~~~~~~~il~~l~~l~~~ 150 (161)
T 3drn_A 97 KIRELYGA-KGFILPARITFVIDKKGIIRHIYN-SQ--MNPANHVNEALKALKQIKEE 150 (161)
T ss_dssp HHHHHTTC-CCSSSCCCEEEEECTTSBEEEEEE-CS--SCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-CCcCcccceEEEECCCCEEEEEEe-cC--CCCCcCHHHHHHHHHHhhhh
Confidence 45667787 31 23899999998763 3332 21 11123445566666655443
No 275
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=81.49 E-value=4.7 Score=31.14 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=33.8
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCC-CccccCCCCHHHHHHHHHhhcC
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNFL 128 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~-~~~y~g~~~~~~L~~fI~~~~~ 128 (323)
..+++..|++...|+++++.+. +. ...+.|..+.++|.++|++..-
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~-G~i~~~~~g~~~~~~l~~~l~~~~~ 144 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDRE-GKVVALFAGRAGREALLDALLLAGA 144 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTT-SEEEEEEESBCCHHHHHHHHHHTTC
T ss_pred hHHHHHHhCCCcccEEEEECCC-CCEEEEEcCCCCHHHHHHHHHhccC
Confidence 4567778998889998888541 22 2345688889999999988753
No 276
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=81.35 E-value=3 Score=34.25 Aligned_cols=54 Identities=7% Similarity=0.109 Sum_probs=31.8
Q ss_pred hHhhhcCCcC---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcCcccc
Q 020623 191 DFADTFEANK---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 248 (323)
Q Consensus 191 ~~~~~~gl~~---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~ 248 (323)
.+...||+ . +...|.++++|.+++ +... +.. ....+.+.|.+.|+.+..|...|
T Consensus 117 ~~~~~~~v-~~~~g~~~P~~~lid~~G~i~~~~~-g~~--~~~~~~~~l~~~l~~l~~~~~~p 175 (195)
T 2bmx_A 117 ELSQAAGV-LNADGVADRVTFIVDPNNEIQFVSA-TAG--SVGRNVDEVLRVLDALQSDELCA 175 (195)
T ss_dssp HHHHHHTC-BCTTSSBCEEEEEECTTSBEEEEEE-ECT--TCCCCHHHHHHHHHHHHC-----
T ss_pred HHHHHhCC-cccCCCccceEEEEcCCCeEEEEEe-cCC--CCCCCHHHHHHHHHHHhhCCCcC
Confidence 45566777 2 116899999998763 3332 211 11236899999999999876655
No 277
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=80.94 E-value=10 Score=29.04 Aligned_cols=43 Identities=14% Similarity=0.399 Sum_probs=32.0
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhhc
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~~ 127 (323)
.+++..|++...|+++++.+ +... .+.|..+.+.|.++|....
T Consensus 93 ~~~~~~~~v~~~P~~~lid~--~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 93 RQVLDAYDVSPLPTTFLINP--EGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp SHHHHHTTCCSSCEEEEECT--TSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred hHHHHhcCCCCCCeEEEECC--CCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 46777899888999988854 2332 4558888899999998653
No 278
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=81.72 E-value=0.32 Score=37.13 Aligned_cols=64 Identities=13% Similarity=0.118 Sum_probs=42.0
Q ss_pred HHHHHhhcCceeEEeecc---cchhhHhhcCCCCCCeEEEecCCCCC---CccccCCCCHHHHHHHHHhh
Q 020623 63 SNLALKYKKKAWFAVAKD---FSEDTMVLYDFDKVPALVALQPSYNE---HNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 63 ~~~A~~~~~~~~F~~~~~---~~~~~~~~~~~~~~p~ivv~k~~~~~---~~~y~g~~~~~~L~~fI~~~ 126 (323)
.+++..+..++.|..++. ...+++.++++...|+++++.+..+. ...+.|..+.+.|.+||...
T Consensus 45 ~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 45 PGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 566766665555544421 23467788999889999999542222 23466877788898888754
No 279
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=79.71 E-value=4.6 Score=30.35 Aligned_cols=77 Identities=8% Similarity=0.169 Sum_probs=50.7
Q ss_pred cEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCC
Q 020623 148 KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDE 227 (323)
Q Consensus 148 ~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~ 227 (323)
+.+++|... .=..=+.+...|.+++.++. +.|..+|.++.+.+++.||+ . .|.++++.. ++... .+
T Consensus 30 ~~vv~y~~~-~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv---~-VP~l~~~~d-G~~v~-------~g 95 (107)
T 2fgx_A 30 RKLVVYGRE-GCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYND---R-VPVLFAVNE-DKELC-------HY 95 (107)
T ss_dssp CCEEEEECS-SCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTT---S-CSEEEETTT-TEEEE-------CS
T ss_pred cEEEEEeCC-CChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCC---C-CceEEEEEC-CEEEE-------ec
Confidence 345555542 11223567778888888876 88999999877777888888 3 999875443 33222 12
Q ss_pred CCCHHHHHHHH
Q 020623 228 EDQGSQISRFL 238 (323)
Q Consensus 228 ~~t~~~I~~Fi 238 (323)
.++.+.|.+||
T Consensus 96 ~~~~~~L~~~L 106 (107)
T 2fgx_A 96 FLDSDVIGAYL 106 (107)
T ss_dssp SCCCHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 36778888887
No 280
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=79.30 E-value=17 Score=26.82 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=32.8
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+. +....+.|..+.+.|.++|.+.
T Consensus 90 ~~~~~~~~~i~~~P~~~~id~~-g~i~~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 90 DGSVWANFGVTQQPAYAFVDPH-GNVDVVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp TCHHHHHTTCCSSSEEEEECTT-CCEEEEESCCCHHHHHHHHHHH
T ss_pred CcHHHHHcCCCCCceEEEECCC-CCEEEEecCCCHHHHHHHHHHH
Confidence 3567778898889999999652 2222467888899999999764
No 281
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=78.99 E-value=18 Score=27.53 Aligned_cols=45 Identities=13% Similarity=0.037 Sum_probs=32.1
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+.-.-...|.|..+.+.|.++|...
T Consensus 95 ~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 95 DKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp SCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred hHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 456778899888999999865211223466877888899988754
No 282
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=78.09 E-value=13 Score=29.15 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=30.1
Q ss_pred hhHhhcCCCCCCeEEEecCCCCCCccccCCC--CHHHHHHHHHhh
Q 020623 84 DTMVLYDFDKVPALVALQPSYNEHNIFYGPF--DEEFLEEFIKQN 126 (323)
Q Consensus 84 ~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~--~~~~L~~fI~~~ 126 (323)
+++.+|++...|+++++.+.-.....+ |.. +.+.|.+||...
T Consensus 107 ~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 107 ELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 677889998999999995411122234 766 788899998753
No 283
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=77.61 E-value=21 Score=27.90 Aligned_cols=94 Identities=9% Similarity=0.092 Sum_probs=47.4
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCcc-----------------------hhhHhhhcCCcCCC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS 202 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~~-----------------------~~~~~~~~gl~~~~ 202 (323)
++++++.|.....-..-......|++++++++++.++.+..+. -..+.+.||+ ...
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v-~~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV-YIK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC-BBT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC-ccc
Confidence 4566665554210122234445666666666445555544431 0123445666 221
Q ss_pred --C--CCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 203 --K--LPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 203 --~--~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
. .|..+++|.+++ +... +. ......+.+.|.+.++.++
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~-g~-~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEY-VS-EATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEE-CS-BTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEe-cC-CcCCCCCHHHHHHHHHHhh
Confidence 1 499999998763 3332 11 1122335577877777654
No 284
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=76.14 E-value=9.9 Score=29.51 Aligned_cols=31 Identities=6% Similarity=-0.007 Sum_probs=21.2
Q ss_pred eEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 206 KMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 206 ~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.++++|++++ +.+. +..+.+.|.+.|+.++.
T Consensus 129 ~~~lid~~G~i~~~~~-------g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFG-------QNKRKGEIAASIATHMR 161 (164)
T ss_dssp EEEEECTTSCEEEEEE-------TTCCHHHHHHHHHHHHG
T ss_pred eEEEECCCCeEEEEeC-------CCCCHHHHHHHHHHHHH
Confidence 7888998763 3321 23577888888888764
No 285
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=75.91 E-value=20 Score=28.89 Aligned_cols=34 Identities=12% Similarity=0.014 Sum_probs=22.9
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
..+++|.+++....- .+..+.+.|.+.|+.+++.
T Consensus 153 ~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 153 TSFLIDRDGVPVERF-----SPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp CEEEECTTSCEEEEE-----CTTCCHHHHHHHHHHHHHC
T ss_pred eEEEECCCCcEEEEE-----CCCCCHHHHHHHHHHHHhh
Confidence 888999876432210 2346778999999988764
No 286
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=75.48 E-value=14 Score=28.51 Aligned_cols=40 Identities=18% Similarity=0.344 Sum_probs=30.7
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
++..|++...|+++++.+ +... .+.|..+.+.|.++|...
T Consensus 112 ~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~i~~l 153 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADR--KGRIRQVQFGQVDDFVLGLLLGSL 153 (160)
T ss_dssp HHHHTTCCSSSEEEEECT--TSBEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECC--CCcEEEEecCcCCHHHHHHHHHHH
Confidence 778899988999999865 3333 455888888899998754
No 287
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=75.26 E-value=15 Score=27.47 Aligned_cols=42 Identities=24% Similarity=0.389 Sum_probs=30.9
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCC-CccccCCCCHHHHHHHHH
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIK 124 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~-~~~y~g~~~~~~L~~fI~ 124 (323)
+.+++..|++...|+++++.+. +. ...+.|..+.+.|.+||.
T Consensus 103 ~~~~~~~~~v~~~P~~~lid~~-G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 103 KGELMKEYHIITIPTSFLLNEK-GEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp SSHHHHHTTCCEESEEEEECTT-CCEEEEEESCCCHHHHHHHHC
T ss_pred chhHHHhcCcCccCeEEEEcCC-CcEEEEEcCCcCHHHHHHhhC
Confidence 3467788998888999999642 22 224668889999999873
No 288
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=75.23 E-value=9.1 Score=29.99 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=20.3
Q ss_pred CCCeEEEEeCCcceeeccCCCCCCCCC--CHHHHHHHHHHH
Q 020623 203 KLPKMVVWDGNENYLTVIGSESIDEED--QGSQISRFLEGY 241 (323)
Q Consensus 203 ~~P~ivI~~~~~kY~~~~~~~~~~~~~--t~~~I~~Fi~~~ 241 (323)
..|.++++| +++....- .+.. +.+.|.+.|+.+
T Consensus 137 ~~P~~~lid-~G~i~~~~-----~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 137 HTATTFVVK-EGRLVLLY-----SPDKAEATDRVVADLQAL 171 (172)
T ss_dssp ECCCEEEEE-TTEEEEEE-----CHHHHTCHHHHHHHHHHC
T ss_pred cCCEEEEEE-CCEEEEEE-----CCCCCCCHHHHHHHHHHh
Confidence 569999999 87432210 1123 677888877653
No 289
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=73.54 E-value=15 Score=28.43 Aligned_cols=48 Identities=8% Similarity=0.106 Sum_probs=25.7
Q ss_pred hHhhhcCCc-CCCCCC--eEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 191 DFADTFEAN-KKSKLP--KMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 191 ~~~~~~gl~-~~~~~P--~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.+.+.||+. .....| ..+++|.+++ +... |.. ...-..+.+.+.++.+
T Consensus 106 ~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~-g~~--~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 106 AVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEM-KQP--GEVRDQRLWTDALAAL 158 (160)
T ss_dssp HHHHHTTCEETTTTEECSEEEEECTTSBEEEEEE-CCT--TCCCCHHHHHHHHHHT
T ss_pred HHHHHcCCccccCCCeeeeEEEECCCCeEEEEEe-cCC--CCCCCHHHHHHHHHHh
Confidence 456677772 112567 8899998763 3332 211 1223456666666543
No 290
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=73.46 E-value=22 Score=26.94 Aligned_cols=43 Identities=28% Similarity=0.334 Sum_probs=30.3
Q ss_pred hhHhhcCCCCCCeEEEecCCCCCCc--cccC--CCCHHHHHHHHHhhcC
Q 020623 84 DTMVLYDFDKVPALVALQPSYNEHN--IFYG--PFDEEFLEEFIKQNFL 128 (323)
Q Consensus 84 ~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g--~~~~~~L~~fI~~~~~ 128 (323)
+++..|++...|+++++.+ +... .+.| +.+.+.|.++|++..-
T Consensus 96 ~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDR--NGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp HHHHHTTCCSSSEEEEECT--TSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred hhHHHcCCCCCCeEEEECC--CCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 5677889888999888854 2333 3445 3456899999988754
No 291
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=72.85 E-value=5.2 Score=28.63 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 163 QKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 163 ~~~~~~l~~~A~~~~~l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
+.+...|.+++..+ |..+|.++.+.+.+.||+ . .|.+++ .+++... | .++.+.|.+|++.++
T Consensus 15 ~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~---~-vPtl~~--~~G~~v~--g------~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 15 DQAVEALAQARAGA----FFSVFIDDDAALESAYGL---R-VPVLRD--PMGRELD--W------PFDAPRLRAWLDAAP 76 (87)
T ss_dssp HHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTT---T-CSEEEC--TTCCEEE--S------CCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCC---C-cCeEEE--ECCEEEe--C------CCCHHHHHHHHHHHH
Confidence 34445566554433 678899877788888888 4 999876 4443321 2 367889999998766
Q ss_pred cCc
Q 020623 243 EGR 245 (323)
Q Consensus 243 ~Gk 245 (323)
...
T Consensus 77 ~~~ 79 (87)
T 1ttz_A 77 HAL 79 (87)
T ss_dssp ---
T ss_pred HHH
Confidence 544
No 292
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=72.59 E-value=21 Score=28.41 Aligned_cols=56 Identities=11% Similarity=0.179 Sum_probs=40.4
Q ss_pred CeEEEEEcCcch--hhHhhhcCCcCCCCCCeEEEEeCC-c-ceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 178 ELVFCYVGIKQF--ADFADTFEANKKSKLPKMVVWDGN-E-NYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 178 ~l~F~~vd~~~~--~~~~~~~gl~~~~~~P~ivI~~~~-~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+++++.+|.+.- ..+++.|++ ...|.+++++++ + ..... .+ .+++.+.++++.+++
T Consensus 77 ~fv~v~~d~~~~~~~~l~~~y~v---~~~P~~~fld~~~G~~l~~~------~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 77 HFIFWQVYHDSEEGQRYIQFYKL---GDFPYVSILDPRTGQKLVEW------HQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp TEEEEEEESSSHHHHHHHHHHTC---CSSSEEEEECTTTCCCCEEE------SS-CCHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHcCC---CCCCEEEEEeCCCCcEeeec------CC-CCHHHHHHHHHHHHH
Confidence 488888888643 346788998 478999999986 5 22222 23 688888888888875
No 293
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=71.66 E-value=7.3 Score=29.20 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=40.2
Q ss_pred hHHHHHHHhhcCceeEEeecc-cchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHH
Q 020623 60 SVMSNLALKYKKKAWFAVAKD-FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFI 123 (323)
Q Consensus 60 ~~f~~~A~~~~~~~~F~~~~~-~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI 123 (323)
..+.+++.++. +.|...+- .+++++.+|++. .|+|+++.+ +..++.|.++.+.|++||
T Consensus 48 ~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~d---G~~v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 48 ASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNE---DKELCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTT---TEEEECSSCCCHHHHHHH
T ss_pred HHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEEC---CEEEEecCCCHHHHHHHh
Confidence 35666776653 55544431 356788889985 999998874 333456888999999998
No 294
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=71.48 E-value=19 Score=27.98 Aligned_cols=37 Identities=8% Similarity=-0.084 Sum_probs=24.4
Q ss_pred CCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 204 LPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
.|..+++|.+++....- .+..+.+.|.+.|+.++.+|
T Consensus 133 ~P~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 133 NFSKFLVDRQGQPVKRY-----SPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp TTCEEEECTTSCEEEEE-----CTTSCGGGGHHHHHHHHHCC
T ss_pred cceEEEECCCCCEEEEc-----CCCCCHHHHHHHHHHHhccC
Confidence 48899999877432210 12356778888888887654
No 295
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=71.18 E-value=21 Score=27.17 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=30.3
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+ +... .+.|..+.+.|.++|...
T Consensus 106 ~~~~~~~~~v~~~P~~~~id~--~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 106 NGRASIEWGVYGVPETFVVGR--EGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp TSHHHHHTTCCSSCEEEEECT--TSBEEEEEESCCCHHHHHHTHHHH
T ss_pred hhHHHHhcCcCccCeEEEEcC--CCCEEEEEeCCCCHHHHHHHHHHH
Confidence 456777889888997777754 2333 356888888888888753
No 296
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=70.72 E-value=18 Score=28.48 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=21.5
Q ss_pred eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 206 KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 206 ~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
..+++|.+++....- .+..+.+.|.+.|+.+++
T Consensus 136 ~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 136 EKFLVDKKGKVYERY-----SSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CEEEECSSSCEEEEE-----CTTSCGGGGHHHHHHHHT
T ss_pred eEEEECCCCCEEEEe-----CCCCCHHHHHHHHHHHHH
Confidence 888999876422210 123567788888888764
No 297
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=73.34 E-value=0.88 Score=35.89 Aligned_cols=52 Identities=10% Similarity=0.176 Sum_probs=33.6
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCccccc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 249 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~ 249 (323)
.+.+.||+ .....|.++++|.+++-.... . ..+.+.+.++++.+.++.-.+.
T Consensus 103 ~~~~~~~~-~~~~~P~~~lid~~G~i~~~~-----~-g~~~~~l~~~l~~l~~~~~~~~ 154 (159)
T 2ls5_A 103 DIFAKYAL-RDAGITRNVLIDREGKIVKLT-----R-LYNEEEFASLVQQINEMLKEGH 154 (159)
Confidence 45667776 335689999998876422210 1 1456678889988887766553
No 298
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=70.58 E-value=33 Score=26.10 Aligned_cols=44 Identities=20% Similarity=0.291 Sum_probs=31.1
Q ss_pred hhhHhhcC--CCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 83 EDTMVLYD--FDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~--~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
.+++..|+ +...|+++++.+.-.-...+.|..+.+.|.++|+.-
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 45667788 778899888865211223567888999999999764
No 299
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=70.52 E-value=22 Score=26.97 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=31.1
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
.+++..|++...|+++++.+ +... .+.|..+.+.|.++|...
T Consensus 98 ~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 98 RTFMDAYLINGIPRFILLDR--DGKIISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp THHHHHTTCCSSCCEEEECT--TSCEEESSCCCTTCHHHHHHHHHH
T ss_pred hhHHHHcCcCCCCEEEEECC--CCeEEEccCCCCCHHHHHHHHHHH
Confidence 36777899888999999975 2333 345777778899988764
No 300
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=70.46 E-value=35 Score=26.72 Aligned_cols=41 Identities=17% Similarity=0.141 Sum_probs=29.5
Q ss_pred HhhcCCCCCCeEEEecCCCCCCccccCCCC-HHHHHHHHHhh
Q 020623 86 MVLYDFDKVPALVALQPSYNEHNIFYGPFD-EEFLEEFIKQN 126 (323)
Q Consensus 86 ~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~-~~~L~~fI~~~ 126 (323)
+.+|++...|+++++.+.-.....+.|..+ .+.|.+||.+.
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 567898889999999542122233558777 89999999764
No 301
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=70.12 E-value=32 Score=26.60 Aligned_cols=36 Identities=6% Similarity=0.027 Sum_probs=23.2
Q ss_pred CCC---eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 203 KLP---KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 203 ~~P---~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
..| ..+++|.+++....- .+..+.+.|.+.|+.+++
T Consensus 130 ~~p~~~~~~lid~~G~i~~~~-----~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 130 DIQWNFAKFLVNKDGQVVDRY-----YPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCCSTTCEEEECTTSCEEEEE-----CTTSCGGGGHHHHHHHTT
T ss_pred cccccccEEEECCCCCEEEee-----CCCCCHHHHHHHHHHHhh
Confidence 457 888999876422210 123567788888888765
No 302
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=70.07 E-value=16 Score=29.04 Aligned_cols=99 Identities=11% Similarity=0.103 Sum_probs=50.1
Q ss_pred cCCCceecCChHHHHHHHHhcCCcccEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchh-hHhhcCC--C
Q 020623 25 VAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSED-TMVLYDF--D 92 (323)
Q Consensus 25 ~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~-~~~~~~~--~ 92 (323)
.++.+.-.+-.+.++.....++ +++|-|... ...|.+++..+.....|..++ +.+.+ ++..+++ .
T Consensus 26 ~~~~i~w~~~~~~~~~~~~~~k---~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~ 102 (164)
T 1sen_A 26 FGDHIHWRTLEDGKKEAAASGL---PLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGG 102 (164)
T ss_dssp SCTTSCBCCHHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCS
T ss_pred ccccccccCHHHHHHHHHhcCC---eEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCC
Confidence 3444433222245555555555 577777543 134555554433233333331 11222 5556666 4
Q ss_pred CCCeEEEecCCCCCCccccCC----------CCHHHHHHHHHhh
Q 020623 93 KVPALVALQPSYNEHNIFYGP----------FDEEFLEEFIKQN 126 (323)
Q Consensus 93 ~~p~ivv~k~~~~~~~~y~g~----------~~~~~L~~fI~~~ 126 (323)
..|+++++.+.-.....+.|. .+.+.|.++|+..
T Consensus 103 ~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 103 YIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred cCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 589999994311112223342 5678888888763
No 303
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=69.72 E-value=27 Score=26.17 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=26.9
Q ss_pred hcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhhc
Q 020623 88 LYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 88 ~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~~ 127 (323)
.|++...|+++++.+ +...++ +..+.++|+++|.+..
T Consensus 104 ~~~v~~~P~~~lid~--~G~i~~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDIRATPTIYLLDG--RKRVIL-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCCCSSSEEEEECT--TCBEEE-CSCCHHHHHHHHHC--
T ss_pred HcCCCCCCeEEEECC--CCCEEe-cCCCHHHHHHHHHHHc
Confidence 788888999999864 344444 5568899999998653
No 304
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=72.61 E-value=0.94 Score=34.75 Aligned_cols=22 Identities=9% Similarity=0.374 Sum_probs=16.4
Q ss_pred hHhhhcCCcCCCCCCeEEEEeCCcc
Q 020623 191 DFADTFEANKKSKLPKMVVWDGNEN 215 (323)
Q Consensus 191 ~~~~~~gl~~~~~~P~ivI~~~~~k 215 (323)
.+++.||+ ...|.+++++.+++
T Consensus 99 ~~~~~~~v---~~~P~~~lid~~G~ 120 (143)
T 2lus_A 99 NVTAKYGI---TGIPALVIVKKDGT 120 (143)
Confidence 45667777 46899999997653
No 305
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=69.65 E-value=28 Score=27.61 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=30.6
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
+.+++..|++...|+.+++.+ +... .+.|..+.+.|.++|...
T Consensus 121 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 121 DGTLGLDLGVYGAPETYLIDK--QGIIRHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp TCHHHHHHTCCSSCEEEEECT--TCBEEEEEESCCCHHHHHHHTHHH
T ss_pred cchHHHHcCCCCCCeEEEECC--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 456777889888898888764 3333 455888888888887653
No 306
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=68.10 E-value=17 Score=29.74 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=29.7
Q ss_pred hHhhhcCCc-C--CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEAN-K--KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~-~--~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+.+.||+. . +...|.++|+|.+++ +... +.. ...-+.+.|.+.|+.+..
T Consensus 111 ~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~-g~~--~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 111 CIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITV-NDL--PVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp HHHHHHTCEETTTTEECEEEEEECTTSBEEEEEE-ECT--TBCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCccCCCCceeeEEEEECCCCEEEEEEe-CCC--CCCCCHHHHHHHHHHhhh
Confidence 345566762 0 016899999998763 3321 211 122467888888888874
No 307
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=66.94 E-value=33 Score=26.30 Aligned_cols=35 Identities=11% Similarity=0.333 Sum_probs=25.8
Q ss_pred CCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 90 DFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 90 ~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
++...|+++++.+ +... .+.|..+.+.|.++|+..
T Consensus 113 ~i~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDA--SGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECT--TSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECC--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 6777899888864 2333 456888889999999765
No 308
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=66.34 E-value=7.7 Score=26.60 Aligned_cols=65 Identities=11% Similarity=0.264 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcCcch----hhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHH
Q 020623 162 SQKLVTTLKAAASANRELVFCYVGIKQF----ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRF 237 (323)
Q Consensus 162 ~~~~~~~l~~~A~~~~~l~F~~vd~~~~----~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~F 237 (323)
-......|.+++.+++++.|..+|.+.. +.+.+.+|. .....|.+.+ +++..- + .+.|.++
T Consensus 14 C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~-~~~~vP~i~~---~g~~i~--~---------~~~l~~~ 78 (85)
T 1ego_A 14 CVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK-PVETVPQIFV---DQQHIG--G---------YTDFAAW 78 (85)
T ss_dssp HHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC-CSCCSCEEEE---TTEEEE--S---------SHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCC-CCceeCeEEE---CCEEEE--C---------HHHHHHH
Confidence 3566778888888887899999988643 256667772 1267999854 333321 1 2567777
Q ss_pred HHHH
Q 020623 238 LEGY 241 (323)
Q Consensus 238 i~~~ 241 (323)
++.-
T Consensus 79 ~~~~ 82 (85)
T 1ego_A 79 VKEN 82 (85)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
No 309
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=65.29 E-value=28 Score=28.24 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=52.7
Q ss_pred HHHHHHhcCCCceecC-ChHHHHHHHHhcCCcccEEEEecCC--------h-hHH--HHHHHhhcCceeEEeec-ccchh
Q 020623 18 VRYLKKFVAPDVSILN-SDAEVSDFVENAGTFFPLFIGFGLD--------E-SVM--SNLALKYKKKAWFAVAK-DFSED 84 (323)
Q Consensus 18 v~~l~k~~~p~v~~i~-s~~~l~~fl~~~~~~~~~vVgf~~~--------~-~~f--~~~A~~~~~~~~F~~~~-~~~~~ 84 (323)
--||+++...+|.=.. +.++++.....++ +++|-|..+ . +.| .+++..+.+++.+..++ +-.++
T Consensus 11 spyl~~ha~~~v~W~~~~~ea~~~A~~~~K---pVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~ 87 (173)
T 3ira_A 11 SPYLLQHAYNPVDWYPWGEEAFEKARKENK---PVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD 87 (173)
T ss_dssp CHHHHTTTTSSSCCBCSSHHHHHHHHHHTC---CEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH
T ss_pred CHHHHhccCCCCCCCCcCHHHHHHHHHhCC---CEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc
Confidence 3578888877774333 4677877777766 678887643 1 133 35666665555554443 22456
Q ss_pred hHhhc--------CCCCCCeEEEecC
Q 020623 85 TMVLY--------DFDKVPALVALQP 102 (323)
Q Consensus 85 ~~~~~--------~~~~~p~ivv~k~ 102 (323)
+...| ++.+.|+++++.+
T Consensus 88 l~~~y~~~~q~~~gv~g~Pt~v~l~~ 113 (173)
T 3ira_A 88 IDNIYMTVCQIILGRGGWPLNIIMTP 113 (173)
T ss_dssp HHHHHHHHHHHHHSCCCSSEEEEECT
T ss_pred HHHHHHHHHHHHcCCCCCcceeeECC
Confidence 66666 8888999999986
No 310
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=64.96 E-value=23 Score=29.58 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=31.5
Q ss_pred hHhhhcCCcC----CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 191 DFADTFEANK----KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 191 ~~~~~~gl~~----~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.+.+.||+ . +...|.++|+|.+++ |... +. .....+.+.|.+.|+.++..
T Consensus 131 ~i~~~ygv-~~~~~g~~~P~~~liD~~G~I~~~~~-g~--~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 131 QISRDYGV-LLEGPGLALRGLFIIDPNGVIKHLSV-ND--LPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp HHHHHTTC-EETTTTEECEEEEEECTTSBEEEEEE-EC--TTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhCC-eecCCCcccceEEEECCCCEEEEEEe-cC--CCCCCCHHHHHHHHHHhhhh
Confidence 34566776 2 116799999998763 3322 21 12234678899999988764
No 311
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=63.84 E-value=8.9 Score=30.94 Aligned_cols=50 Identities=6% Similarity=0.052 Sum_probs=30.8
Q ss_pred hHhhhcCCcCC----CCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 191 DFADTFEANKK----SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 191 ~~~~~~gl~~~----~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.+.+.||+ .. ...|.++++|.+++ +... +.. ...-+.+.|.+.|+.+...
T Consensus 103 ~~~~~~~v-~~~~~g~~~P~~~lid~~G~i~~~~~-g~~--~~~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 103 TISRQFDV-LNEETGLADRGTFIIDPDGVIQAIEI-NAD--GIGRDASTLINKVKAAQYV 158 (187)
T ss_dssp HHHHHTTC-EETTTTEECEEEEEECTTSBEEEEEE-ECT--TSCCCTTHHHHHHHHHHHH
T ss_pred HHHHHhCC-CcCCCCceeeEEEEECCCCeEEEEEe-cCC--CCCCCHHHHHHHHHHHhhh
Confidence 45566777 21 16899999998763 3322 211 1123678888999888763
No 312
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=62.98 E-value=6.5 Score=32.18 Aligned_cols=49 Identities=8% Similarity=0.135 Sum_probs=30.1
Q ss_pred hHhhhcCCcC---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANK---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+.+.||+ . +...|..+++|.+++ +... |.. ....+.+.|.+.|+.+..
T Consensus 108 ~~~~~~~v-~~~~g~~~P~~~lid~~G~i~~~~~-g~~--~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 108 SISRDYDV-LFEEAIALRGAFLIDKNMKVRHAVI-NDL--PLGRNADEMLRMVDALLH 161 (198)
T ss_dssp HHHHHTTC-EETTTEECEEEEEEETTTEEEEEEE-ESS--SCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCC-cccCCcccceEEEECCCCEEEEEEe-cCC--CCCCCHHHHHHHHHHHHH
Confidence 45567777 2 116899999998763 3322 211 112367888888888763
No 313
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=61.60 E-value=14 Score=27.05 Aligned_cols=75 Identities=8% Similarity=-0.116 Sum_probs=45.9
Q ss_pred CcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCc----chhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCC
Q 020623 147 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK----QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGS 222 (323)
Q Consensus 147 ~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~----~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~ 222 (323)
++.++.|... -=..-+.+...|.++|++++ ++-++.+ ..+.+++.||+ ..+|.++| +++. +
T Consensus 13 k~~vV~F~A~-WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V---~~~PT~~i---~G~~-~---- 77 (106)
T 3kp8_A 13 QIGGTMYGAY-WCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGI---TSYPTWII---NGRT-Y---- 77 (106)
T ss_dssp HHTCEEEECT-TCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTC---CSSSEEEE---TTEE-E----
T ss_pred CCEEEEEECC-CCHHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCC---eEeCEEEE---CCEE-e----
Confidence 3444555542 11234566778888887765 3333422 45578889999 57999887 4443 2
Q ss_pred CCCCCCCCHHHHHHHHH
Q 020623 223 ESIDEEDQGSQISRFLE 239 (323)
Q Consensus 223 ~~~~~~~t~~~I~~Fi~ 239 (323)
.+..+.+.|.+|+.
T Consensus 78 ---~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 78 ---TGVRSLEALAVASG 91 (106)
T ss_dssp ---ESCCCHHHHHHHHT
T ss_pred ---cCCCCHHHHHHHhC
Confidence 23467888888863
No 314
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=60.06 E-value=49 Score=25.52 Aligned_cols=43 Identities=16% Similarity=0.029 Sum_probs=29.1
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+.+++.+ +... .+.|..+.+.|.++|...
T Consensus 114 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 114 DGMLGLDLGVYGAPETFLIDG--NGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp TCHHHHHHTCCSSSEEEEECT--TSBEEEEEESCCCHHHHHHTTHHH
T ss_pred chHHHHHcCccccCEEEEECC--CCeEEEEEeCCCCHHHHHHHHHHH
Confidence 345677888888897666654 2333 355878888888887653
No 315
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=59.52 E-value=6.6 Score=29.79 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=28.4
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
..++..|++...|+++++.+ +....+... +.+.|.++|.+.
T Consensus 104 ~~~~~~~~v~~~P~~~lid~--~G~i~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 104 SETAKQYAILTLPTNILLSP--TGKILARDI-QGEALTGKLKEL 144 (148)
T ss_dssp CHHHHHTTCCSSSEEEEECT--TSBEEEESC-CHHHHHHHHHHH
T ss_pred hHHHHhcCCCCcCEEEEECC--CCeEEEecC-CHHHHHHHHHHH
Confidence 46778899988999999854 333333222 677888888753
No 316
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=59.34 E-value=42 Score=25.76 Aligned_cols=48 Identities=10% Similarity=0.065 Sum_probs=31.1
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCccccCC--CCHHHHHHHHHhhcCCC
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHNIFYGP--FDEEFLEEFIKQNFLPL 130 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~--~~~~~L~~fI~~~~~Pl 130 (323)
.++...|++...|+++++.+.-.-...+.|. .+..++.+.+..+..|.
T Consensus 105 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 105 GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC---
T ss_pred HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcccc
Confidence 4677889998899988886521112234553 56778999888887663
No 317
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=58.02 E-value=61 Score=24.85 Aligned_cols=64 Identities=13% Similarity=0.232 Sum_probs=42.7
Q ss_pred hhHHHHHHHhhcCceeEEeecccchhhHhhcCCCCCCeEEEecCCCCCCccccCCC-CHHHHHHHHHhh
Q 020623 59 ESVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPF-DEEFLEEFIKQN 126 (323)
Q Consensus 59 ~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~-~~~~L~~fI~~~ 126 (323)
.+...+++.++.-. .|.+..+ +.++...|++...|+++++.+ +....+.|.. +.+.|.++|.+.
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~d-~~~~~~~~~v~~~P~~~lid~--~G~i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 98 PEMFRKFIANYGDP-SWIMVMD-DGSLVEKFNVRSIDYIVIMDK--SSNVLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp HHHHHHHHHHHSCT-TSEEEEC-CSHHHHHTTCCSSSEEEEEET--TCCEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCC-CeeEEeC-hHHHHHHhCCCCceEEEEEcC--CCcEEEeCCCCCHHHHHHHHHHH
Confidence 34566666665431 2333323 567888999988999999864 3444447777 888999998763
No 318
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=57.59 E-value=46 Score=27.50 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=29.1
Q ss_pred hHhhhcCCcC---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANK---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+.+.||+ . +...|.++|+|.+++ |... +.. ...-+.+.|.+.|+.+..
T Consensus 127 ~~~~~ygv-~~~~g~~~p~~~lID~~G~i~~~~~-~~~--~~~~~~~ell~~l~~l~~ 180 (213)
T 2i81_A 127 SISKDYNV-LFDDSVSLRAFVLIDMNGIVQHLLV-NNL--AIGRSVDEILRIIDAIQH 180 (213)
T ss_dssp HHHHHTTC-EETTTEECEEEEEECTTSBEEEEEE-ECT--TCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCC-ccccCCcccEEEEECCCCEEEEEEe-cCC--CCCCCHHHHHHHHHHHHh
Confidence 34556666 2 115789999998763 3332 111 112467888888888763
No 319
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=57.20 E-value=37 Score=27.43 Aligned_cols=49 Identities=12% Similarity=0.234 Sum_probs=28.2
Q ss_pred HhhhcCCcCCC---CCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 192 FADTFEANKKS---KLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 192 ~~~~~gl~~~~---~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+...||+.... ..|..+++|.+++ +... +.. ...-+.+.+.+.|+....
T Consensus 110 ~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~-g~~--~~~~~~~e~l~~l~~l~~ 163 (197)
T 1qmv_A 110 LSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITV-NDL--PVGRSVDEALRLVQAFQY 163 (197)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEEEEEE-ECT--TBCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCccCCCCceeeEEEEECCCCcEEEEEe-CCC--CCCCCHHHHHHHHHhcch
Confidence 45566762001 5799999998763 3221 211 112456788888887754
No 320
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=55.43 E-value=58 Score=25.71 Aligned_cols=39 Identities=8% Similarity=0.002 Sum_probs=22.3
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEc
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVG 185 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd 185 (323)
++++++.|....- ..-......|+++++++++ +.++-+.
T Consensus 38 Gk~vlv~F~atwC-~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 38 GKVSLVVNVASDC-QLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp TSEEEEEEECSSS-TTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred CCEEEEEEEecCC-CCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4666665654211 1234555677788887764 6666654
No 321
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=54.86 E-value=67 Score=24.31 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=40.1
Q ss_pred hHHHHHHHhhcCceeEEeecccch-----hhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 60 SVMSNLALKYKKKAWFAVAKDFSE-----DTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 60 ~~f~~~A~~~~~~~~F~~~~~~~~-----~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
+...+++.++.-.+..... ... .++..|++...|+++++.+ +... .+.|..+.+.|.++|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 81 ISLKAFLHEYRIKFPVGVD--QPGDGAMPRTMAAYQMRGTPSLLLIDK--AGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp HHHHHHHHHTTCCSCEEEE--CCCSSSSCHHHHHTTCCSSSEEEEECT--TSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEc--CccchhhHHHHHHcCCCCCCEEEEECC--CCCEEEEEeCCCCHHHHHHHHHHH
Confidence 3555666665433332222 122 5788899988999988865 3333 455888888899888764
No 322
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=54.83 E-value=52 Score=25.30 Aligned_cols=34 Identities=3% Similarity=-0.110 Sum_probs=19.8
Q ss_pred CCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 204 LPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 204 ~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.|..+|+|.+++ +.+. +. ...-..+.|.+.++.+
T Consensus 125 ~p~~~lid~~G~i~~~~~-~~---~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAWR-KV---KVAGHADAVLAALKAH 160 (163)
T ss_dssp CCEEEEECTTSCEEEEEC-SC---CSTTHHHHHHHHHHHH
T ss_pred ceEEEEECCCCeEEEEEc-CC---CcccCHHHHHHHHHHH
Confidence 799999999874 3331 11 1223456666666654
No 323
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=53.75 E-value=1.1e+02 Score=29.00 Aligned_cols=111 Identities=10% Similarity=0.022 Sum_probs=67.4
Q ss_pred cccCCCC---ChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEecC-C-------hhHHHHHHHhhcCcee
Q 020623 6 TEYYGPR---KAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D-------ESVMSNLALKYKKKAW 74 (323)
Q Consensus 6 ~eY~G~R---~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~~-~-------~~~f~~~A~~~~~~~~ 74 (323)
..|.|-. .-..++.=+....+.+. .+ +.+.++.+.+.+.. +.++-|.. . ...+.++|..+. ++.
T Consensus 76 i~f~g~p~g~e~~s~~~~l~~~~~~~~-~~-~~~~~~~i~~~~~~--~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~ 150 (521)
T 1hyu_A 76 PRFAGSPLGHEFTSLVLALLWTGGHPS-KE-AQSLLEQIRDIDGD--FEFETYYSLSCHNCPDVVQALNLMAVLNP-RIK 150 (521)
T ss_dssp CEEESCCCGGGHHHHHHHHHHHTTCCC-CS-CHHHHHHHHHCCSC--EEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEE
T ss_pred EEEeccCcchhHHHHHHHHHhhcCCCC-CC-CHHHHHHHHhcCCC--cceEEEECCCCcCcHHHHHHHHHHHhHcC-ceE
Confidence 4455544 34455555555666663 35 44555555433332 23444543 2 246777887765 666
Q ss_pred EEeec-ccchhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 75 FAVAK-DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 75 F~~~~-~~~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
|...+ +..++++.+|++...|++++ + ...+..|..+.+.|.+|+...
T Consensus 151 ~~~vd~~~~~~~~~~~~i~svPt~~i--~---g~~~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 151 HTAIDGGTFQNEITERNVMGVPAVFV--N---GKEFGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEETTTCHHHHHHTTCCSSSEEEE--T---TEEEEESCCCHHHHHHHHCCS
T ss_pred EEEEechhhHHHHHHhCCCccCEEEE--C---CEEEecCCCCHHHHHHHHhhc
Confidence 65543 23577888999988999977 2 233445888889999998765
No 324
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=53.14 E-value=81 Score=24.79 Aligned_cols=61 Identities=10% Similarity=0.128 Sum_probs=34.8
Q ss_pred HHHHhhcCceeEEeeccc---chhhHhhcCCCCCCeEEEecCCCCCC-ccccCCCCHHHHHHHHHh
Q 020623 64 NLALKYKKKAWFAVAKDF---SEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 64 ~~A~~~~~~~~F~~~~~~---~~~~~~~~~~~~~p~ivv~k~~~~~~-~~y~g~~~~~~L~~fI~~ 125 (323)
+++..+.+++.+..++.. ...++.+|++...|+++++.+..++. ..+.| .+.+++.++|..
T Consensus 69 ~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 69 AVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp HHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred HHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 455555445544333211 23467789998999999997631222 23445 676666555543
No 325
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=52.93 E-value=28 Score=28.04 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=29.4
Q ss_pred hHhhhcCCcC---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANK---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+.+.||+ . +...|.++|+|.+++ +... +.. ....+.+.|.+.|+.+..
T Consensus 106 ~~~~~~gv-~~~~g~~~P~~~liD~~G~i~~~~~-g~~--~~~~~~~~l~~~l~~l~~ 159 (192)
T 2h01_A 106 SIARSYDV-LFNESVALRAFVLIDKQGVVQHLLV-NNL--ALGRSVDEILRLIDALQH 159 (192)
T ss_dssp HHHHHTTC-EETTTEECCEEEEECTTSBEEEEEE-GGG--SSGGGHHHHHHHHHHHHH
T ss_pred HHHHHhCC-cCcCCceeeEEEEEcCCCEEEEEEe-CCC--CCCCCHHHHHHHHHHHhh
Confidence 34566777 2 115899999998763 3322 211 112356788888887763
No 326
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=52.09 E-value=83 Score=24.61 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=15.6
Q ss_pred hhhHhhcCCCCCCeEEEecC
Q 020623 83 EDTMVLYDFDKVPALVALQP 102 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~ 102 (323)
.+++..+++...|+++++++
T Consensus 90 ~~~~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 90 TDKNLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp SCGGGCTTCCCSSEEEEECT
T ss_pred hhhHhhcCCCCCCEEEEECC
Confidence 34566778878999999985
No 327
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=51.79 E-value=31 Score=27.46 Aligned_cols=30 Identities=13% Similarity=-0.125 Sum_probs=18.4
Q ss_pred CCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 204 LPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 204 ~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
.|.++++|.+++ +.+. +..+.+.|.+.|+.
T Consensus 150 ~P~~~lid~~G~i~~~~~-------g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 150 NFTKFLIDKNGCVVKRYG-------PMEEPLVIEKDLPH 181 (183)
T ss_dssp TTCEEEECTTSCEEEEEC-------TTSCTHHHHTTSGG
T ss_pred cceEEEECCCCCEEEEeC-------CCCCHHHHHHHHHH
Confidence 489999998764 3332 23456666665543
No 328
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=51.60 E-value=64 Score=25.60 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=29.2
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCcc-----------ccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNI-----------FYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~-----------y~g~~~~~~L~~fI~~~ 126 (323)
+.+++..|++...|+++++.+ +...+ +.|..+.++|.++|...
T Consensus 119 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 119 TQEVAKAYDAACTPDFYIFDR--DLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp SCHHHHHHTCCEESEEEEEET--TCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred chHHHHHhCCCCCCeEEEEcC--CCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 456777888877899888854 23322 34666777888888754
No 329
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=51.57 E-value=48 Score=24.81 Aligned_cols=38 Identities=21% Similarity=0.412 Sum_probs=26.2
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHh
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~ 125 (323)
+...|++...|+++++.+ +...++.+ ...+.|++||++
T Consensus 105 ~~~~~~v~~~P~~~lid~--~G~i~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDK--NKTVLLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp HTTCSCCTTCSEEEEECT--TCBEEEEE-ECHHHHHHHHHC
T ss_pred hhhhcCCCcCCeEEEECC--CCcEEecC-CCHHHHHHHHhC
Confidence 456788888899988864 44544432 247889999863
No 330
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=51.12 E-value=16 Score=26.85 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=30.1
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~ 125 (323)
..+++.+|++...|++++ + +. .|.|..+.+.|.+|+.-
T Consensus 55 ~~~l~~~~~V~~~PT~~i--~--G~--~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII--N--GR--TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE--T--TE--EEESCCCHHHHHHHHTC
T ss_pred hHHHHHHcCCeEeCEEEE--C--CE--EecCCCCHHHHHHHhCC
Confidence 467888999999999777 2 22 37899999999999843
No 331
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=49.88 E-value=18 Score=25.70 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=29.5
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
+++++.+|++. .|++++ .+ +..+. |.++.+.|.+||...
T Consensus 37 ~~~l~~~~g~~-vPtl~~-~~---G~~v~-g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 37 DAALESAYGLR-VPVLRD-PM---GRELD-WPFDAPRLRAWLDAA 75 (87)
T ss_dssp CHHHHHHHTTT-CSEEEC-TT---CCEEE-SCCCHHHHHHHHHTC
T ss_pred CHHHHHHhCCC-cCeEEE-EC---CEEEe-CCCCHHHHHHHHHHH
Confidence 56788899986 998877 43 33333 888999999999754
No 332
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=49.65 E-value=11 Score=28.56 Aligned_cols=37 Identities=19% Similarity=0.082 Sum_probs=22.7
Q ss_pred hHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHH
Q 020623 85 TMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFI 123 (323)
Q Consensus 85 ~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI 123 (323)
++..|++...|+++++.+ +... .+.|.-+.+.+.+.+
T Consensus 103 ~~~~~~i~~~P~~~lid~--~G~i~~~~~g~~~~~~~l~~l 141 (148)
T 3hcz_A 103 FKITYDIYATPVLYVLDK--NKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp HHHHHCCCSSCEEEEECT--TCBEEEESCCGGGHHHHHHHH
T ss_pred HHHhcCcCCCCEEEEECC--CCcEEEecCCHHHHHHHHHHH
Confidence 778889888999999964 2333 234543334444444
No 333
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=49.48 E-value=73 Score=25.34 Aligned_cols=38 Identities=8% Similarity=-0.035 Sum_probs=24.3
Q ss_pred CCC---eEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCc
Q 020623 203 KLP---KMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGR 245 (323)
Q Consensus 203 ~~P---~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gk 245 (323)
..| ..+++|.+++....- .+..+.+.|.+.|+.+++|.
T Consensus 145 ~iP~~~~~~liD~~G~i~~~~-----~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 145 AIKWNFTSFLIDRDGVPVERF-----SPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp SCCSTTCEEEECTTSCEEEEE-----CTTCCHHHHHHHHHHHC---
T ss_pred ccccceeEEEECCCCCEEEEE-----CCCCCHHHHHHHHHHHHhcC
Confidence 456 888999877432210 23467889999999988763
No 334
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=48.91 E-value=59 Score=24.45 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=28.0
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCc--cccCC--CCHHHHHHHHHhh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHN--IFYGP--FDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~--~~~~~L~~fI~~~ 126 (323)
..++..|++...|+++++.+ +... .+.|. .+.++|.++|++-
T Consensus 96 ~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 96 KRVGKLYGTTGVPETFVIDR--HGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp CHHHHHHTCCSBCEEEEECT--TSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred hHHHHHhCCCCCCeEEEECC--CCcEEEEEcCCCccccHHHHHHHHHH
Confidence 34777889888998777754 2333 34454 4667899988653
No 335
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=48.71 E-value=10 Score=29.06 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=40.4
Q ss_pred EEEEecC--ChhHHHHHHHhhcCceeEEeeccc---chhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHh
Q 020623 51 LFIGFGL--DESVMSNLALKYKKKAWFAVAKDF---SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 51 ~vVgf~~--~~~~f~~~A~~~~~~~~F~~~~~~---~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~ 125 (323)
.+|+... +.+...+++.++.-. |-+..+. +.+++..|++...|+++++.+ +....+.. .+.+.|.++|+.
T Consensus 71 ~~v~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~--~G~i~~~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 71 GMLGISLDVDKQQWKDAIKRDTLD--WEQVCDFGGLNSEVAKQYSIYKIPANILLSS--DGKILAKN-LRGEELKKKIEN 145 (150)
T ss_dssp EEEEEECCSCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCCSSSEEEEECT--TSBEEEES-CCHHHHHHHHHH
T ss_pred EEEEEEcCCCHHHHHHHHHHhCCC--ceEEEcCcccchHHHHHcCCCccCeEEEECC--CCEEEEcc-CCHHHHHHHHHH
Confidence 4555532 234556666655433 3223222 347788999988999999864 33333322 256777777764
No 336
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=48.31 E-value=40 Score=26.76 Aligned_cols=40 Identities=8% Similarity=-0.057 Sum_probs=22.5
Q ss_pred CCcEEEEEEeCCChhHHHHHHHHHHHHHHhCCC--eEEEEEcC
Q 020623 146 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGI 186 (323)
Q Consensus 146 ~~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~--l~F~~vd~ 186 (323)
++++++.|....- ..-......|+++++++++ +.++.+..
T Consensus 49 Gk~vlv~F~atwC-~~C~~~~p~l~~l~~~~~~~~v~vv~vs~ 90 (181)
T 2p31_A 49 GSVSLVVNVASEC-GFTDQHYRALQQLQRDLGPHHFNVLAFPC 90 (181)
T ss_dssp TSEEEEEEECSSS-TTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEeccCC-CCcHHHHHHHHHHHHHhhcCCEEEEEEEC
Confidence 4666666654211 1224455667777777653 66666654
No 337
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=47.77 E-value=51 Score=23.58 Aligned_cols=78 Identities=9% Similarity=0.187 Sum_probs=43.8
Q ss_pred CcEEEEEEeCCChhHHHHHHHHHHHHHHhCCCeEEEEEcCc--chhhHhhhcCCcCCCCCCeEEEEeCCcceeeccCCCC
Q 020623 147 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSES 224 (323)
Q Consensus 147 ~~~v~~f~~~~~~e~~~~~~~~l~~~A~~~~~l~F~~vd~~--~~~~~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~ 224 (323)
.+.+++|... .=..=+.+...|.++++ ++.|..+|.+ +.+.+.+.+| . ..|.++ .+ ++....
T Consensus 16 ~~~v~~f~~~-~C~~C~~~~~~L~~l~~---~i~~~~vdi~~~~~~el~~~~g-~---~vP~l~-~~--g~~~~~----- 79 (100)
T 1wjk_A 16 LPVLTLFTKA-PCPLCDEAKEVLQPYKD---RFILQEVDITLPENSTWYERYK-F---DIPVFH-LN--GQFLMM----- 79 (100)
T ss_dssp CCEEEEEECS-SCHHHHHHHHHTSTTSS---SSEEEEEETTSSTTHHHHHHSS-S---SCSEEE-ES--SSEEEE-----
T ss_pred CCEEEEEeCC-CCcchHHHHHHHHHhhh---CCeEEEEECCCcchHHHHHHHC-C---CCCEEE-EC--CEEEEe-----
Confidence 3555556542 11122334444444332 3889999987 5556677776 3 589764 33 322211
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 020623 225 IDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 225 ~~~~~t~~~I~~Fi~~~~ 242 (323)
..++.+.|.++++.++
T Consensus 80 --~g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 80 --HRVNTSKLEKQLRKLS 95 (100)
T ss_dssp --SSCCHHHHHHHHHSSS
T ss_pred --cCCCHHHHHHHHHHHH
Confidence 1267889999997654
No 338
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=47.10 E-value=49 Score=26.13 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=15.3
Q ss_pred hHhhhcCCcCCC-------CCCeEEEEeCCcc
Q 020623 191 DFADTFEANKKS-------KLPKMVVWDGNEN 215 (323)
Q Consensus 191 ~~~~~~gl~~~~-------~~P~ivI~~~~~k 215 (323)
.+.+.||+ ... ..|..+|+|.+++
T Consensus 110 ~~~~~~gv-~~~~~~~~g~~~p~~~lid~~G~ 140 (175)
T 1xvq_A 110 SFGEDYGV-TIADGPMAGLLARAIVVIGADGN 140 (175)
T ss_dssp SHHHHTTC-BBCSSTTTTSBCSEEEEECTTSB
T ss_pred HHHHHhCC-cccccccCCcccceEEEECCCCe
Confidence 34566776 222 1389999998763
No 339
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=45.95 E-value=18 Score=27.87 Aligned_cols=44 Identities=11% Similarity=0.131 Sum_probs=33.2
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhhc
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQNF 127 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~~ 127 (323)
..+++..|++...|+++++.+ +... .+.|..+.+.|.+||....
T Consensus 110 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 110 GGTIAQNLNISVYPSWALIGK--DGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TCHHHHHTTCCSSSEEEEECT--TSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred chHHHHHcCCCccceEEEECC--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456778899888999999854 2333 3558888999999998753
No 340
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=44.21 E-value=12 Score=25.47 Aligned_cols=44 Identities=11% Similarity=0.152 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCCC-eEEEEEcCc-chhhHhhhcCCcCCCCCCeEEE
Q 020623 163 QKLVTTLKAAASANRE-LVFCYVGIK-QFADFADTFEANKKSKLPKMVV 209 (323)
Q Consensus 163 ~~~~~~l~~~A~~~~~-l~F~~vd~~-~~~~~~~~~gl~~~~~~P~ivI 209 (323)
+.+...|.++++++.. +.++.+|.+ .....+..+|+ ...|++++
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv---~~vPt~~i 61 (80)
T 2k8s_A 16 VSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGV---KSVPALVI 61 (80)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTC---CEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCC---CcCCEEEE
Confidence 4566677777776653 666666653 34566777898 57899877
No 341
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=44.11 E-value=76 Score=28.76 Aligned_cols=42 Identities=21% Similarity=0.164 Sum_probs=29.3
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
.+++..|++...|+++++.+ +... .+.|..+.+.|.++|++.
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~--~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDA--TGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp SHHHHHTTCCEESEEEEECT--TSBEEEEEESBCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeC--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45677888888899888854 2333 355777778888887653
No 342
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=42.50 E-value=13 Score=28.25 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=32.0
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHhh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~~ 126 (323)
.+++.++++...|++++|+++ ++..-..|-...+.+..|+...
T Consensus 66 ~~la~~~~V~g~PT~i~f~~G-~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMAGD-VESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEETT-EEEEEEECCCCHHHHHHHHHHH
T ss_pred hhHHHHCCCCCCCEEEEEECC-EEEeeecCCCCHHHHHHHHHHH
Confidence 467778888888999999953 2223456877889999999763
No 343
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=42.09 E-value=94 Score=25.64 Aligned_cols=49 Identities=10% Similarity=0.251 Sum_probs=25.7
Q ss_pred hHhhhcCCcC---CCCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHH
Q 020623 191 DFADTFEANK---KSKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYR 242 (323)
Q Consensus 191 ~~~~~~gl~~---~~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~ 242 (323)
.+...||+.. +...|..+|+|.+++ |... +.. ...-..+.|.+.++...
T Consensus 144 ~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~-g~~--~~~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 144 EISKAYGVFDEEDGNAFRGLFIIDPNGILRQITI-NDK--PVGRSVDETLRLLDAFQ 197 (222)
T ss_dssp HHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEE-ECT--TBCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCeecCCCCccceEEEECCCCeEEEEEe-cCC--CCCCCHHHHHHHHHHhh
Confidence 3445677620 115799999998763 3332 111 11223556666665543
No 344
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=41.55 E-value=98 Score=24.30 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=27.4
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccC----------CCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYG----------PFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g----------~~~~~~L~~fI~~~ 126 (323)
+.+++..|++...|+++++.+ +...++.| ..+.++|.++|...
T Consensus 105 ~~~~~~~~~v~~~P~~~lid~--~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 105 TQEVAKAYRALRTPEVFLFDE--RRLLRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp SSHHHHHTTCCEESEEEEECT--TCBEEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred cchHHHHcCCCCCCeEEEECC--CCcEEEEEecCCccccccccCHHHHHHHHHHH
Confidence 446777888877899888854 33333333 23556777777654
No 345
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=41.43 E-value=80 Score=27.09 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=30.4
Q ss_pred hHhhhcCCcCC-----CCCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 191 DFADTFEANKK-----SKLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 191 ~~~~~~gl~~~-----~~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.+...||+ .. ...|.+.|+|++++ +... +.. ...-+.+.|.+.|+.++.
T Consensus 107 ~ia~~ygv-~~~~~g~~~~p~~fIID~dG~I~~~~~-~~~--~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 107 TVARRLGL-LHAESATHTVRGVFIVDARGVIRTMLY-YPM--ELGRLVDEILRIVKALKL 162 (249)
T ss_dssp HHHHHHTC-CCTTCSSSCCEEEEEECTTSBEEEEEE-ECT--TBCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCC-ccccCCCcccceEEEECCCCeEEEEEe-cCC--cccchhHHHHHHHHHHHh
Confidence 45667787 21 16899999999763 3221 111 112367888888888765
No 346
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=40.64 E-value=82 Score=24.95 Aligned_cols=31 Identities=16% Similarity=-0.049 Sum_probs=18.5
Q ss_pred CCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHHH
Q 020623 204 LPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEGY 241 (323)
Q Consensus 204 ~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~~ 241 (323)
.|..+++|.+++ +.+. + ..+.+.|.+.|+.+
T Consensus 152 ~P~~~lid~~G~i~~~~~-g------~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 152 NFTKFLIDKNGCVVKRYG-P------MEEPLVIEKDLPHY 184 (185)
T ss_dssp SCCEEEECTTSCEEEEEC-T------TSCGGGGGGGHHHH
T ss_pred cceEEEECCCCCEEEeeC-C------CCCHHHHHHHHHHh
Confidence 488999998764 3332 2 24556666666543
No 347
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=40.57 E-value=39 Score=30.00 Aligned_cols=78 Identities=8% Similarity=0.000 Sum_probs=47.8
Q ss_pred hHHHHHHHHhcCCcccEEEEecC-C-------hhHHHHHHHhhcCceeEEeec--ccchhhHhhcCCCCCCeEEEecCCC
Q 020623 35 DAEVSDFVENAGTFFPLFIGFGL-D-------ESVMSNLALKYKKKAWFAVAK--DFSEDTMVLYDFDKVPALVALQPSY 104 (323)
Q Consensus 35 ~~~l~~fl~~~~~~~~~vVgf~~-~-------~~~f~~~A~~~~~~~~F~~~~--~~~~~~~~~~~~~~~p~ivv~k~~~ 104 (323)
..++.+.+++..+ +-|.. . .+.|+++|+++. .+.+...+ +..++++.++++.+.|++.+ +
T Consensus 189 ~~~la~~l~~~~v-----V~F~A~WC~~Ck~l~p~le~lA~~l~-~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~-- 258 (291)
T 3kp9_A 189 AVGLAAHLRQIGG-----TMYGAYWCPHCQDQKELFGAAFDQVP-YVECSPNGPGTPQAQECTEAGITSYPTWII--N-- 258 (291)
T ss_dssp HHHHHHHHHHTTC-----EEEECTTCHHHHHHHHHHGGGGGGSC-EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--T--
T ss_pred HHHHHHHhCCCCE-----EEEECCCCHHHHHHHHHHHHHHHHcC-EEEEeecCchhhHHHHHHHcCCcccCeEEE--C--
Confidence 4566666777652 33433 2 346777775542 11111111 12567888999999999655 3
Q ss_pred CCCccccCCCCHHHHHHHHH
Q 020623 105 NEHNIFYGPFDEEFLEEFIK 124 (323)
Q Consensus 105 ~~~~~y~g~~~~~~L~~fI~ 124 (323)
++ .|.|..+.++|.+|+.
T Consensus 259 G~--~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 259 GR--TYTGVRSLEALAVASG 276 (291)
T ss_dssp TE--EEESCCCHHHHHHHTC
T ss_pred CE--EecCCCCHHHHHHHHC
Confidence 22 3789889999999985
No 348
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=40.05 E-value=1.3e+02 Score=23.33 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=24.2
Q ss_pred hhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 193 ADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 193 ~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
...+|+ ...|.++| ++++. .+..+.+.+.+.|+..+.
T Consensus 137 a~~~gv---~gtPt~~i---~g~~~--------~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 137 AQKLGF---NGTPSFVV---EDALV--------PGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHTC---CSSSEEEE---TTEEE--------CSCCCHHHHHHHHHHHHH
T ss_pred HHHcCC---ccCCEEEE---CCEEe--------eCCCCHHHHHHHHHHHHh
Confidence 345677 46899887 33322 234577889999887763
No 349
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=36.11 E-value=1.3e+02 Score=22.42 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=25.1
Q ss_pred hhhHhhcCCCCCCeEEEecCCCCCCccccCCCCHHHHHHHHHh
Q 020623 83 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 125 (323)
Q Consensus 83 ~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g~~~~~~L~~fI~~ 125 (323)
.+++..|++...|+++++.+ +...++.. .+.++|.++|+.
T Consensus 99 ~~~~~~~~v~~~P~~~lid~--~G~i~~~~-~~~~~l~~~l~~ 138 (152)
T 2lrn_A 99 KDVLESYCIVGFPHIILVDP--EGKIVAKE-LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHTTCCSSCEEEEECT--TSEEEEEC-CCTTHHHHHHHH
T ss_pred HHHHHHhCCCcCCeEEEECC--CCeEEEee-CCHHHHHHHHHH
Confidence 56777899888999998854 23332221 234567777654
No 350
>2od5_A Hypothetical protein; metagenomics, structural genomics, joint center for structur genomics, JCSG, protein structure initiative; HET: 1PE; 1.79A {Uncultured marine organism} SCOP: a.4.5.70
Probab=35.22 E-value=54 Score=23.84 Aligned_cols=40 Identities=8% Similarity=0.262 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHhcCCCceecCChHHHHHHHHhcCCcccEEEEec
Q 020623 11 PRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG 56 (323)
Q Consensus 11 ~R~a~~Iv~~l~k~~~p~v~~i~s~~~l~~fl~~~~~~~~~vVgf~ 56 (323)
||+.-+|.+|+.+++.|. ++.+++.++++.++. ++=||+.
T Consensus 28 prNT~EIleh~nstMrhg----ttpqqlgNvLskDkd--Ivkvgtv 67 (116)
T 2od5_A 28 PRNTAEILEHINSTMRHG----TTSQQLGNVLSKDKD--IVKVGYI 67 (116)
T ss_dssp CEEHHHHHHHHHTSSSSC----CCHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCcHHHHHHHHHhccCCC----CCHHHHhhHHhcccc--eeeEEEe
Confidence 578899999999999887 356899999988775 4668864
No 351
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=33.67 E-value=1.8e+02 Score=23.22 Aligned_cols=36 Identities=3% Similarity=-0.051 Sum_probs=20.8
Q ss_pred CCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcC
Q 020623 204 LPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 244 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~G 244 (323)
.|.++++|++++....- .+..+.+.+.+.|...+..
T Consensus 145 ~~~~~liD~~G~i~~~~-----~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 145 SIFFYLMDPEGQFVDAL-----GRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp CCCEEEECTTSCEEEEE-----CTTCCTTHHHHHHHHHHHH
T ss_pred cceEEEECCCCcEEEEe-----CCCCCHHHHHHHHHHHHHH
Confidence 45788999877422210 1224556677777776654
No 352
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=31.22 E-value=1.8e+02 Score=22.49 Aligned_cols=35 Identities=9% Similarity=0.149 Sum_probs=23.8
Q ss_pred CCCCCCeEEEecCCCCCCc--cccCCCCHHHHHHHHHhh
Q 020623 90 DFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 126 (323)
Q Consensus 90 ~~~~~p~ivv~k~~~~~~~--~y~g~~~~~~L~~fI~~~ 126 (323)
++...|+++++.+ +... .+.|..+.++|.++|...
T Consensus 143 ~v~~~P~~~lid~--~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 143 PASVIPTTIVLDK--QHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp CTTCCSEEEEECT--TSCEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECC--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4556787777754 2333 456888888999988753
No 353
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=30.79 E-value=1.5e+02 Score=23.04 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=31.1
Q ss_pred eEEEEEcCcchhhHhhhcCCcCCCCCCeEEEEeCCcc--eeeccCCCCC-CCCCCHHHHHHHHHHHH
Q 020623 179 LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNEN--YLTVIGSESI-DEEDQGSQISRFLEGYR 242 (323)
Q Consensus 179 l~F~~vd~~~~~~~~~~~gl~~~~~~P~ivI~~~~~k--Y~~~~~~~~~-~~~~t~~~I~~Fi~~~~ 242 (323)
+..+-+|.+ .......+++ ...|.+++++++++ +.. .|..+- .-....+++.++++.+.
T Consensus 80 fv~V~vD~e-~~~~~~~~~v---~~~PT~~f~~~~G~~v~~~-~G~~~~~~~~~~~~~~~~ll~~~~ 141 (151)
T 3ph9_A 80 FIMLNLMHE-TTDKNLSPDG---QYVPRIMFVDPSLTVRADI-AGRYSNRLYTYEPRDLPLLIENMK 141 (151)
T ss_dssp CEEEEESSC-CSCGGGCTTC---CCSSEEEEECTTSCBCTTC-CCSCTTSTTCCCGGGHHHHHHHHH
T ss_pred eEEEEecCC-chhhHhhcCC---CCCCEEEEECCCCCEEEEE-eCCcCCcccccchhhHHHHHHHHH
Confidence 555555522 2233445666 57899999997552 222 132110 01245566777776665
No 354
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=30.71 E-value=1.6e+02 Score=23.28 Aligned_cols=73 Identities=10% Similarity=-0.116 Sum_probs=41.4
Q ss_pred cEEEEecCC--------hhHHHHHHHhhcCceeEEeec-ccchhhHhhcC---CCCCCeEEEecCCCCCCccccCCCCHH
Q 020623 50 PLFIGFGLD--------ESVMSNLALKYKKKAWFAVAK-DFSEDTMVLYD---FDKVPALVALQPSYNEHNIFYGPFDEE 117 (323)
Q Consensus 50 ~~vVgf~~~--------~~~f~~~A~~~~~~~~F~~~~-~~~~~~~~~~~---~~~~p~ivv~k~~~~~~~~y~g~~~~~ 117 (323)
+++|-|... .+.+.+++..+. ++.|...+ +.+++++.+|. +...|++++++++ +......|... .
T Consensus 56 ~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~-G~~~~~~g~~p-~ 132 (167)
T 1z6n_A 56 YRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEE-FNLLGRFVERP-Q 132 (167)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTT-CCEEEEEESSC-H
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCC-CCEEEEEcCCC-H
Confidence 466777543 247788888775 45554442 22445666665 7789999999863 12111124433 3
Q ss_pred HHHHHHHh
Q 020623 118 FLEEFIKQ 125 (323)
Q Consensus 118 ~L~~fI~~ 125 (323)
.+.+++.+
T Consensus 133 ~~~~~i~~ 140 (167)
T 1z6n_A 133 AVLDGGPQ 140 (167)
T ss_dssp HHHHHCHH
T ss_pred HHHHhHHH
Confidence 45555554
No 355
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=29.96 E-value=2.2e+02 Score=23.06 Aligned_cols=35 Identities=11% Similarity=-0.100 Sum_probs=21.3
Q ss_pred CCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 204 LPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 204 ~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
.|...++|.+++....- .+..+.+.|.+.|+.+++
T Consensus 173 ~p~tflID~~G~i~~~~-----~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 173 NFEKFLVGPDGVPLRRY-----SRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp TTCEEEECTTSCEEEEE-----CTTSCGGGGHHHHHHHHC
T ss_pred CceEEEEcCCCcEEEEe-----CCCCCHHHHHHHHHHHhh
Confidence 38889999877432210 123456777777777653
No 356
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=27.18 E-value=2.1e+02 Score=21.92 Aligned_cols=46 Identities=15% Similarity=0.258 Sum_probs=26.0
Q ss_pred hHhhhcCCcCCC-------CCCeEEEEeCCcc--eeeccCCCCCCCCCCHHHHHHHHHH
Q 020623 191 DFADTFEANKKS-------KLPKMVVWDGNEN--YLTVIGSESIDEEDQGSQISRFLEG 240 (323)
Q Consensus 191 ~~~~~~gl~~~~-------~~P~ivI~~~~~k--Y~~~~~~~~~~~~~t~~~I~~Fi~~ 240 (323)
.+ +.||+ ... ..|..+|+|++++ |... +.. .....+.+.|.+.|+.
T Consensus 115 ~~-~~~gv-~~~~~~~~g~~~p~~~liD~~G~i~~~~~-~~~-~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 115 DM-EKYGV-LIGEGALKGILARAVFIIDKEGKVAYVQL-VPE-ITEEPNYDEVVNKVKE 169 (171)
T ss_dssp GG-GGGTC-BBCSSTTTTSBCCEEEEECTTSBEEEEEE-CSB-TTSCCCCHHHHHHHHH
T ss_pred cH-HHhCC-EecccccCCceeeEEEEEcCCCeEEEEEe-CCC-cCCCCCHHHHHHHHHh
Confidence 45 77777 321 2699999998763 3332 110 1223456677776664
No 357
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=26.22 E-value=67 Score=26.32 Aligned_cols=45 Identities=16% Similarity=0.288 Sum_probs=30.4
Q ss_pred HhhhcCCcCCCCCCeEEEEeCCcceeeccCCCCCCCCCCHHHHHHHHHHHHcCcccccc
Q 020623 192 FADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKK 250 (323)
Q Consensus 192 ~~~~~gl~~~~~~P~ivI~~~~~kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~Gkl~~~~ 250 (323)
....+|+ ...|.++| +++|. .+..+.+.+.+.|+..+.|||..+.
T Consensus 155 ~a~~~gV---~gtPtfvv---nG~~~--------~G~~~~e~l~~~i~~~~~~~~~~~~ 199 (202)
T 3gha_A 155 LNQKMNI---QATPTIYV---NDKVI--------KNFADYDEIKETIEKELKGKLEHHH 199 (202)
T ss_dssp HHHHTTC---CSSCEEEE---TTEEC--------SCTTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHcCC---CcCCEEEE---CCEEe--------cCCCCHHHHHHHHHHHHHhhhhhcc
Confidence 3456888 46799987 45553 2346789999999999999998754
No 358
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=25.76 E-value=2.2e+02 Score=23.15 Aligned_cols=43 Identities=12% Similarity=0.160 Sum_probs=28.1
Q ss_pred chhhHhhcCCCCCCeEEEecCCCCCCccccC-----------CCCHHHHHHHHHhh
Q 020623 82 SEDTMVLYDFDKVPALVALQPSYNEHNIFYG-----------PFDEEFLEEFIKQN 126 (323)
Q Consensus 82 ~~~~~~~~~~~~~p~ivv~k~~~~~~~~y~g-----------~~~~~~L~~fI~~~ 126 (323)
..+++..|++...|+++++.+ +...+|.| ..+.++|.+.|..-
T Consensus 132 ~~~~~~~~~v~~~P~~~liD~--~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 132 SQSVAKAYGAACTPDFFLYDR--ERRLVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp TCHHHHHHTCCEESEEEEECT--TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred ccHHHHHcCCCCCCeEEEECC--CCcEEEeccccccccccccccCHHHHHHHHHHH
Confidence 456777889887899988854 34444432 33456777777654
No 359
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=23.54 E-value=1.2e+02 Score=24.16 Aligned_cols=76 Identities=9% Similarity=0.021 Sum_probs=42.6
Q ss_pred EEEEecCC-hhHHHHHHHhhcC--ceeEEeecccchhhHhhcCCC-----CCCeEEEecCCCCCCc--cccCCC----CH
Q 020623 51 LFIGFGLD-ESVMSNLALKYKK--KAWFAVAKDFSEDTMVLYDFD-----KVPALVALQPSYNEHN--IFYGPF----DE 116 (323)
Q Consensus 51 ~vVgf~~~-~~~f~~~A~~~~~--~~~F~~~~~~~~~~~~~~~~~-----~~p~ivv~k~~~~~~~--~y~g~~----~~ 116 (323)
.+|+...+ .+...+.++++.. ...|.+..+.+.+++..|++. ..|+++++.+ +... .+.|.. +.
T Consensus 81 ~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~--~G~i~~~~~g~~~~~~~~ 158 (195)
T 2bmx_A 81 QILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDP--NNEIQFVSATAGSVGRNV 158 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECT--TSBEEEEEEECTTCCCCH
T ss_pred EEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcC--CCeEEEEEecCCCCCCCH
Confidence 45665433 3334445554411 233333322345677888886 6899888864 2333 233432 57
Q ss_pred HHHHHHHHhhcC
Q 020623 117 EFLEEFIKQNFL 128 (323)
Q Consensus 117 ~~L~~fI~~~~~ 128 (323)
++|.++|+....
T Consensus 159 ~~l~~~l~~l~~ 170 (195)
T 2bmx_A 159 DEVLRVLDALQS 170 (195)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 889998887654
No 360
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=22.52 E-value=1.1e+02 Score=22.85 Aligned_cols=55 Identities=7% Similarity=-0.030 Sum_probs=37.3
Q ss_pred eEEEEEcCcch--hhHhhhcCCcCCCCCCeEEEEeCCc-ceeeccCCCCCCCCCCHHHHHHHHHHHHc
Q 020623 179 LVFCYVGIKQF--ADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 243 (323)
Q Consensus 179 l~F~~vd~~~~--~~~~~~~gl~~~~~~P~ivI~~~~~-kY~~~~~~~~~~~~~t~~~I~~Fi~~~~~ 243 (323)
+.++.+|.+.. ..++..+++ ...|.+++++..+ .... .+-...+.+.+|++.++.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V---~g~PT~i~f~~G~ev~Ri-------~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPV---TFTPTFVLMAGDVESGRL-------EGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCC---CSSSEEEEEETTEEEEEE-------ECCCCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCC---CCCCEEEEEECCEEEeee-------cCCCCHHHHHHHHHHHHh
Confidence 56777777653 356667788 4789999998322 2322 234678899999998764
Done!