Query 020626
Match_columns 323
No_of_seqs 200 out of 1181
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 05:48:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q4a_A Clavaminate synthase-li 100.0 1.3E-61 4.4E-66 447.9 28.5 319 5-323 6-330 (330)
2 1oih_A Putative alkylsulfatase 100.0 1.8E-44 6.3E-49 329.0 14.8 258 21-321 13-280 (301)
3 3pvj_A Alpha-ketoglutarate-dep 100.0 9.2E-42 3.2E-46 306.9 15.1 241 35-321 20-269 (277)
4 1otj_A Alpha-ketoglutarate-dep 100.0 3.3E-41 1.1E-45 304.9 11.3 242 35-321 22-271 (283)
5 3r1j_A Alpha-ketoglutarate-dep 100.0 1.1E-40 3.6E-45 302.8 14.0 237 40-321 32-273 (301)
6 3eat_X Pyoverdine biosynthesis 100.0 2.9E-40 1E-44 299.5 14.6 246 20-322 26-278 (293)
7 1nx8_A CARC, carbapenem syntha 100.0 1.7E-39 5.8E-44 292.2 15.0 230 33-322 21-269 (273)
8 3o2g_A Gamma-butyrobetaine dio 100.0 7.8E-37 2.7E-41 287.2 20.0 228 35-321 127-366 (388)
9 2og5_A Putative oxygenase; non 100.0 2.1E-31 7E-36 248.0 13.9 215 42-322 82-331 (357)
10 1ds1_A Clavaminate synthase 1; 100.0 8.3E-31 2.8E-35 241.1 10.8 215 44-321 50-298 (324)
11 2wbq_A L-arginine beta-hydroxy 100.0 2E-30 6.9E-35 241.7 9.7 229 45-322 69-336 (358)
12 1jr7_A GABT protein, hypotheti 99.9 3.9E-24 1.3E-28 191.2 10.3 202 44-317 66-293 (311)
13 3nnf_A CURA; non-HAEM Fe(II)/a 69.4 4.5 0.00016 35.7 4.2 30 281-311 228-257 (344)
14 2opw_A Phyhd1 protein; double- 65.3 3.6 0.00012 35.7 2.9 32 285-317 226-259 (291)
15 3emr_A ECTD; double stranded b 62.4 9.1 0.00031 33.8 5.0 32 286-318 229-262 (310)
16 2fct_A Syringomycin biosynthes 54.4 6.9 0.00024 34.3 2.8 27 285-312 218-244 (313)
17 2rdq_A 1-deoxypentalenic acid 52.2 7.5 0.00026 33.5 2.6 32 44-77 21-52 (288)
18 1wdi_A Hypothetical protein TT 51.7 5.4 0.00018 35.8 1.5 19 291-309 52-70 (345)
19 1vky_A S-adenosylmethionine:tR 51.4 5.8 0.0002 35.5 1.7 20 290-309 61-80 (347)
20 2a1x_A Phytanoyl-COA dioxygena 51.0 8.6 0.0003 33.6 2.9 33 285-318 214-248 (308)
21 1yy3_A S-adenosylmethionine:tR 48.9 5.4 0.00018 35.7 1.1 20 290-309 53-72 (346)
22 3itq_A Prolyl 4-hydroxylase, a 37.0 14 0.00049 30.8 1.9 36 286-321 165-209 (216)
23 3gja_A CYTC3; halogenase, beta 36.5 21 0.00072 31.5 3.0 27 285-312 220-246 (319)
24 2jig_A Prolyl-4 hydroxylase; h 30.9 22 0.00076 29.5 2.1 36 285-320 169-213 (224)
25 3gt2_A Putative uncharacterize 30.3 22 0.00074 27.4 1.8 13 290-302 89-101 (142)
26 3itq_A Prolyl 4-hydroxylase, a 29.4 21 0.00071 29.8 1.6 37 108-144 122-163 (216)
27 3pl0_A Uncharacterized protein 25.2 30 0.001 29.6 1.9 22 290-311 203-224 (254)
28 3rcq_A Aspartyl/asparaginyl be 25.0 37 0.0013 27.8 2.3 32 287-319 146-178 (197)
29 2k1g_A Lipoprotein SPR; soluti 24.6 25 0.00086 26.9 1.2 12 290-301 67-78 (135)
30 2jig_A Prolyl-4 hydroxylase; h 24.6 33 0.0011 28.4 2.0 37 108-144 109-153 (224)
31 2lxi_A RNA-binding protein 10; 22.5 84 0.0029 21.5 3.6 25 55-79 2-27 (91)
32 2rdq_A 1-deoxypentalenic acid 22.3 85 0.0029 26.6 4.4 26 286-312 210-235 (288)
33 3pbi_A Invasion protein; pepti 21.0 39 0.0014 28.0 1.8 20 290-309 158-189 (214)
No 1
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=100.00 E-value=1.3e-61 Score=447.94 Aligned_cols=319 Identities=66% Similarity=1.158 Sum_probs=278.4
Q ss_pred cccccccccccCCCCCCceEEecCCCC------ChhhHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhC
Q 020626 5 FAEIKLAEQKSYNSIPFPWVLTPNSTT------NLSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFG 78 (323)
Q Consensus 5 ~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G 78 (323)
+.+.++++|+++++.+||++|+|..+. +..+|.+++++.+++|+++|.+||+|+||||++.++++|.+|+++||
T Consensus 6 ~~~~~~~~~~~~~~~~~p~~i~p~~~~~~~~~~~g~dl~~~~~~~~~~l~~~l~~~GvvlfRg~~~~~~~~~~~~~~~~G 85 (330)
T 2q4a_A 6 LVETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVLFRGFPVNSADDFNDVVEAFG 85 (330)
T ss_dssp CEECCCSSCEEETTEEESEEEECC------CCCCHHHHHHHHHHTHHHHHHHHHHHSEEEECSSCCCSHHHHHHHHHHTC
T ss_pred EeeeccCCCccCCCCCCCEEEeCCCCCccccccccccHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHhC
Confidence 568899999999999999999997542 36799999988899999999999999999999558999999999999
Q ss_pred CCCCCCccCCCCceeecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChH
Q 020626 79 YEELPYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPE 158 (323)
Q Consensus 79 ~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe 158 (323)
...++|.|+..++..+.++|++++..+....+.||||++|.+.||++++|+|+++|+.||+|.|||+++||+.|+++.|+
T Consensus 86 ~~~~~~~g~~~~r~~v~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad~~~ay~~L~~~~p~ 165 (330)
T 2q4a_A 86 FDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPE 165 (330)
T ss_dssp CCBCCCCSCSSCCEEEETTEEECCCSCTTSCEEEECTTTTSTTCCSEEEEEEEECCSEECCCCEEEHHHHHHHHHHHCHH
T ss_pred CCcccccCCCCccccccCccccCCCCCCccccccccccCCCCCCCceEEEECcCCCCcCCceeeecHHHHHHHhhhhCHH
Confidence 88777877667777777788888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCce
Q 020626 159 FVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRK 238 (323)
Q Consensus 159 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~ 238 (323)
+++.|++.++.|.+++....++.++.+.+|+..|+++++++++++|+..|+.++|.+++....+...||+|++||.||++
T Consensus 166 ~~~~L~~~~~~~~~~~~~~~~~~s~~~~~w~~~f~~~~~~~~e~~~~~~g~~~~~~~~~~~~~~~~~~Pvv~~hp~tg~~ 245 (330)
T 2q4a_A 166 FVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRK 245 (330)
T ss_dssp HHHHHHHHCEEEEEEECSSBCTTSTTCCCHHHHTTCSSHHHHHHHHHHTTCCCEECTTSCEEEEEEEECSSEEETTTTEE
T ss_pred HHHHHHhCCeEEEEEccccccccccCCccHHHHhcCCCHHHHHHHHHhcCCceEEcCCCceEEEEeccccEEecCCCCCe
Confidence 99999999999998876543444556679999999999999999999999999999887633356789999999999999
Q ss_pred eeeeccchhccccccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCCCceee
Q 020626 239 IWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHIL 318 (323)
Q Consensus 239 ~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g~Rr~l 318 (323)
+|||+....+..+.+.++..|..+.+++|++++.++++++.+++++++|+|+|++||||||||++++|||++|+|.||+|
T Consensus 246 ~lf~~~~~~~~~~~~~~~~~p~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~g~rR~l 325 (330)
T 2q4a_A 246 VWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVL 325 (330)
T ss_dssp ECCSCHHHHHTTCCBTTBCHHHHEEETTSCCCCHHHHHHHHHHHHHHCBCCCCCTTCEEEEETTTEEEEECCEESCCEEE
T ss_pred EEEechhhhccccccccccCccccccCCCCcCCHHHHHHHHHHHHhhEeecCCCCCCEEEEecccccccCCCCCCCceEE
Confidence 99998654431122122233456788999999999999999888999999999999999999999999999999999999
Q ss_pred ecccC
Q 020626 319 ASLCK 323 (323)
Q Consensus 319 ~~~~~ 323 (323)
++||+
T Consensus 326 ~r~~~ 330 (330)
T 2q4a_A 326 ASLCK 330 (330)
T ss_dssp EEEBC
T ss_pred EeecC
Confidence 99985
No 2
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=100.00 E-value=1.8e-44 Score=328.98 Aligned_cols=258 Identities=14% Similarity=0.144 Sum_probs=175.9
Q ss_pred CceEEecCCCC-----ChhhHHHHH-HhhHHHHHHHHhhccEEEEecCC-CCChhHHHHHHHHhCCCCCCCccCCCCcee
Q 020626 21 FPWVLTPNSTT-----NLSFLTETI-RTQKPFLESLLLKAGAVLLRGFD-VKTANDFNDVVEAFGYEELPYVGGAAPRSH 93 (323)
Q Consensus 21 ~p~~~~~~~~~-----~~~~l~~~~-~~~~~~l~~~l~~~Gvvl~rg~~-~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~ 93 (323)
.++-|+|.++. ...+|.+++ ++..++|+++|.+||+|+||||+ + +++++.+|+++||.+...+..+..+.
T Consensus 13 ~~~~i~~l~~~~Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l-~~~~~~~~~~~fG~l~~~~~~~~~~~-- 89 (301)
T 1oih_A 13 LELDVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHL-DDQSQEGFAKLLGEPVAHPTVPVVDG-- 89 (301)
T ss_dssp CCCEEEESSSSSCEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHTTSCBCC----CCCTT--
T ss_pred CceEEEECCCCcceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHHhCCCccCcCCCCCCC--
Confidence 34556665541 222455555 56789999999999999999999 9 79999999999998643322211111
Q ss_pred ecCceeecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEE
Q 020626 94 VVGRVFTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRI 173 (323)
Q Consensus 94 ~~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~ 173 (323)
.+.|+.....++...+.||+|++|.+.||.+++|+|+++|+.||+|.|||+++||+.|+ ++++++|+++.+.|...
T Consensus 90 -~~~v~~v~~~~~~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad~~~ay~~L~---~~~~~~~~~l~~~~~~~ 165 (301)
T 1oih_A 90 -TRYLLQLDGAQGQRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELP---EPLRELADKLWAVHSNE 165 (301)
T ss_dssp -CSSCEEEC-----CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHHHCEEEEECC
T ss_pred -CCceEEEecCCCCcCcCCEecccCcCCCCceEEEEEeecCCCCCccccccHHHHHHhCC---HHHHHHHhcCEEEEccc
Confidence 13455442222356788999999999999999999999999999999999999999999 78889998776666432
Q ss_pred ecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhcccccc
Q 020626 174 YQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKD 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~ 253 (323)
+. ....|+.. +++ +++.++ +|..++. +...||+|++||+||+++||++....++.++
T Consensus 166 ~~--------~~~~~~~~--~~~--~~~~~~-------~~~~~~~---~~~~hPvV~~hP~tG~~~l~~~~~~~~i~gl- 222 (301)
T 1oih_A 166 YD--------YASLKPDI--DPA--KLERHR-------KVFTSTV---YETEHPVVRVHPISGERALQLGHFVKRIKGY- 222 (301)
T ss_dssp --------------------------------------------C---CEEEEESEEECTTTCCEEECCSTTEEEETTS-
T ss_pred cc--------cccccccc--ccc--hhhhhh-------hhhhccC---CceECCCEEecCCCCcEEEEeccCcccccCC-
Confidence 11 11234322 111 222222 2443332 3567999999999999999987444444222
Q ss_pred CCCCCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeecc
Q 020626 254 TQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILASL 321 (323)
Q Consensus 254 ~~~~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~~ 321 (323)
..+.++++++.|.+.+ ++++|+|+|++||||||||++++|+|++|.| .+|+|.+.
T Consensus 223 -------------~~~e~~~ll~~l~~~~~~~~~~~~~~w~~GDvvi~DNr~~lH~r~~f~~~~~R~l~R~ 280 (301)
T 1oih_A 223 -------------SLADSQHLFAVLQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRV 280 (301)
T ss_dssp -------------CHHHHHHHHHHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEE
T ss_pred -------------CHHHHHHHHHHHHHHHhCccceEEEEEcCCCEEEEEccceeecccCCCCCCceEEEEE
Confidence 1234567888888766 7899999999999999999999999999976 46666554
No 3
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=100.00 E-value=9.2e-42 Score=306.91 Aligned_cols=241 Identities=17% Similarity=0.201 Sum_probs=167.7
Q ss_pred hHHHH-HHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCC--CCCCc
Q 020626 35 FLTET-IRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESS--LDRNI 110 (323)
Q Consensus 35 ~l~~~-~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~--~~~~~ 110 (323)
+|.++ .++..++|+++|.+||||+||||++ +++++.+|+++||.+.. ++.+ ..+. .+.|+.....+ ....+
T Consensus 20 dl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l-~~~~~~~fa~~fG~l~~~p~~~-~~~~---~~~i~~i~~~~~~~~~~~ 94 (277)
T 3pvj_A 20 DISRDISAEERDAIEQALLQHQVLFLRDQPI-NPEQQARFAARFGDLHIHPIYP-NVPD---TPQVLVLDTAVTDVRDNA 94 (277)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHSEEEESSCCC-CHHHHHHHHGGGSCEECCSSSC-EETT---EEEEEEEETTTSCCGGGS
T ss_pred CccccCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCCcccCccC-CCCC---CCeEEEEecCCCCCCcCC
Confidence 44443 3567899999999999999999999 89999999999998643 2222 1111 11233221111 23467
Q ss_pred cccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccc
Q 020626 111 PFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKS 190 (323)
Q Consensus 111 ~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~ 190 (323)
.||+|++|.+.||.+++|+|+++|+.||+|.|||+++||+.|+ +++++.|++ +...+..... +..
T Consensus 95 ~wH~D~sy~~~pp~~~~l~~~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~--l~a~h~~~~~----------~~~ 159 (277)
T 3pvj_A 95 VWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALS---APLREMLDG--LTATHDFTKS----------FPL 159 (277)
T ss_dssp SCBCTTTTSSSCCCEEEEEEEECCSSCCCEEEEEHHHHHHHSC---HHHHHHHTT--CEEEECGGGT----------SCG
T ss_pred CceeeCCCcCCCCceEEEEeeccCCCCCCcEeeeHHHHHHhCC---HHHHHHHhc--cEEEeCcHHH----------hhh
Confidence 8999999999999999999999999999999999999999999 889999984 4554433111 110
Q ss_pred -ccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeec-cchhccccccCCCCCCcceecCCCC
Q 020626 191 -IFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNS-IVMAYTCWKDTQNDPVKAVTFGNGS 268 (323)
Q Consensus 191 -~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~-~~~~~~~~~~~~~~~~~~~~~~dg~ 268 (323)
.+. ...++...+..... ..+...||+|++||+||++++|.+ .+..++.++ ..
T Consensus 160 ~~~~-~~~~~~~~~~~~~~-----------~~~~~~hPvVr~hP~TG~k~L~vn~~~~~~i~gl--------------~~ 213 (277)
T 3pvj_A 160 ERFG-TTPQDLARWEATRR-----------NNPPLSHPVVRTHPVSGRKALFVNEGFTTRINEL--------------SE 213 (277)
T ss_dssp GGTC-SSHHHHHHHHHHHH-----------HSCCEEEESEEECTTTCCEEECCCTTTEEEETTS--------------CH
T ss_pred hhcc-CCchhccchhhhhc-----------cCCCCcCCeEEecCCCCCEEEEeccccceeecCC--------------CH
Confidence 000 01111111100000 012356999999999999998754 444454332 12
Q ss_pred CCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC-CCceeeecc
Q 020626 269 PYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS-RPRHILASL 321 (323)
Q Consensus 269 ~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~-g~Rr~l~~~ 321 (323)
+.++++|+.|.+.+ ++++|+|+|++||++||||++++|+|+++. +.+|++.+.
T Consensus 214 ~es~~ll~~L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ 269 (277)
T 3pvj_A 214 LESDALLRLLFAHATRPEFSIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRA 269 (277)
T ss_dssp HHHHHHHHHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEeeCCCCEEEEeCCceeeeccCCCCCCccEEEEE
Confidence 34567888887754 689999999999999999999999999864 456666553
No 4
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=100.00 E-value=3.3e-41 Score=304.89 Aligned_cols=242 Identities=19% Similarity=0.164 Sum_probs=166.1
Q ss_pred hHHHHH-HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCC--CCCCc
Q 020626 35 FLTETI-RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESS--LDRNI 110 (323)
Q Consensus 35 ~l~~~~-~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~--~~~~~ 110 (323)
+|.+++ ++..++|+++|.+||+|+||||++ +++++.+|+++||.+.. ++.+. .+.. +.++..+..+ .....
T Consensus 22 dl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~-~~~~~~~~~~~~G~~~~~~~~~~-~~~~---~~i~~v~~~~~~~~~~~ 96 (283)
T 1otj_A 22 DLTRPLSDNQFEQLYHAVLRHQVVFLRDQAI-TPQQQRALAQRFGELHIHPVYPH-AEGV---DEIIVLDTHNDNPPDND 96 (283)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHSEEEECSCCC-CHHHHHHHHHTTSCBCCCSSSCE-ETTE---EEEEEEEEBTTBCCCCC
T ss_pred CcCccCCHHHHHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCCCcCCCCCC-CCCC---CeEEEEeCCCCCCCcCC
Confidence 344433 557899999999999999999998 89999999999998643 23331 1111 1222221111 12456
Q ss_pred cccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccc
Q 020626 111 PFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKS 190 (323)
Q Consensus 111 ~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~ 190 (323)
.||||++|.+.||++++|+|+++|+.||+|.|||+++||+.|+ +++++.|+.+...|...+. ..|+.
T Consensus 97 ~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~l~~~~~~~~~----------~~~~~ 163 (283)
T 1otj_A 97 NWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALS---VPFRQLLSGLRAEHDFRKS----------FPEYK 163 (283)
T ss_dssp SCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHTTCEEEECHHHH----------SCGGG
T ss_pred CcEeeccCccCCCceEEEEEEecCCCCCcceeeeHHHHHHhCC---HHHHHHHhCcEEEEcchhh----------cchhh
Confidence 8999999999999999999999999999999999999999999 7888888865544421111 11222
Q ss_pred ccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeee-eccchhccccccCCCCCCcceecCCCCC
Q 020626 191 IFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWF-NSIVMAYTCWKDTQNDPVKAVTFGNGSP 269 (323)
Q Consensus 191 ~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf-~~~~~~~~~~~~~~~~~~~~~~~~dg~~ 269 (323)
.++.+ .+.+.+.... + ..+...||+|++||.||++++| |+....++.+++ .+
T Consensus 164 ~~g~~--~~~~~~~~~~--------~---~~~~~~~Pvv~~hp~tG~~~l~~n~~~~~~i~g~~--------------~~ 216 (283)
T 1otj_A 164 YRKTE--EEHQRWREAV--------A---KNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVS--------------EK 216 (283)
T ss_dssp SCSSH--HHHHHHHHHH--------H---HCCCEEEESEEECTTTCCEEECCCTTTEEEESSSC--------------HH
T ss_pred cccCc--cccccccccc--------c---cCCCccCCeEEeCCCCCcEEEEecccccccCCCCC--------------HH
Confidence 22210 0111111100 0 1123579999999999999865 544444443221 22
Q ss_pred CCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC-CCceeeecc
Q 020626 270 YPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS-RPRHILASL 321 (323)
Q Consensus 270 ~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~-g~Rr~l~~~ 321 (323)
.++++++.|.+.+ ++++|+|+|++||+|||||++++|+|++|. +.+|+|.+.
T Consensus 217 e~~~ll~~l~~~~~~~~~~~~~~w~~GDv~i~DN~~~lH~r~~f~~~~~R~l~R~ 271 (283)
T 1otj_A 217 ESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRA 271 (283)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCcEEEeeEcCCCEEEEECcceeecccCCCCCCceEEEEE
Confidence 3456777776653 578999999999999999999999999985 456666654
No 5
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=100.00 E-value=1.1e-40 Score=302.82 Aligned_cols=237 Identities=12% Similarity=0.114 Sum_probs=157.8
Q ss_pred HHhhHHHHHHHHhhccEEEEecC-CCCChhHHHHHHHHhCCCCC-CCccCCCCceeecCceeecCCCCCCCCccccCCCC
Q 020626 40 IRTQKPFLESLLLKAGAVLLRGF-DVKTANDFNDVVEAFGYEEL-PYVGGAAPRSHVVGRVFTANESSLDRNIPFHQEMA 117 (323)
Q Consensus 40 ~~~~~~~l~~~l~~~Gvvl~rg~-~~~~~e~~~~~~~~~G~~~~-~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~HtD~s 117 (323)
.++..++|+++|.+||||+|||| ++ +++++.+|+++||.+.. ++.+... .. ..+.++...... +..+.||+|++
T Consensus 32 ~d~~~~~l~~al~~~gvv~fR~q~~l-~~~~~~~fa~~fG~l~~hp~~~~~~-~~-~~pei~~i~~~~-~~~~~wH~D~s 107 (301)
T 3r1j_A 32 DDATVEQIRRALLTHKVIFFRHQHHL-DDSRQLEFARLLGTPIGHPAASALA-AK-HLPVITPIDSEY-GKATRWHTDVT 107 (301)
T ss_dssp CHHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHHHSCBBC---------------------------CCSCBCTTT
T ss_pred CHHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHhcCCccccccccCCC-CC-CCCcEEEEeCCC-CCCCCCccccC
Confidence 35678999999999999999999 88 89999999999998742 3212110 00 011222211111 24678999999
Q ss_pred CCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCcccccccCCh
Q 020626 118 LLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDK 197 (323)
Q Consensus 118 y~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 197 (323)
|.+.||.+++|+|+++|+.||+|.|||+++||+.|+ +++++.|+++.+.+. .... +.......
T Consensus 108 ~~~~pp~~~~l~~~~~p~~GG~T~fad~~~ay~~L~---~~~~~~~~~l~a~h~--~~~~----------~~~~~~~~-- 170 (301)
T 3r1j_A 108 FAANYPAASILRAVTLPSYGGSTLWASTVAAYQQLP---EPLRHLTENLWALHT--NRYD----------YVRNDPMN-- 170 (301)
T ss_dssp TSSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTCC---HHHHHHHTTCEEEEE--CC----------------------
T ss_pred CccCCCceeEEEEeecCCCCCCCeeEcHHHHHHhCC---HHHHHHHhcCEEEEc--chhh----------hhhhcccc--
Confidence 999999999999999999999999999999999999 899999986544443 2110 00000000
Q ss_pred HHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccccccCCCCCCcceecCCCCCCCHHHHHH
Q 020626 198 SLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYN 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~l~~ 277 (323)
...+.... .+. + ..+...||+|++||+||+++||.+.+..++.++ ..+.++++|+.
T Consensus 171 ~~~~~~~~------~~~--~--~~~~~~hPvVr~hP~TG~k~L~v~~~~~~i~gl--------------~~~Es~~lL~~ 226 (301)
T 3r1j_A 171 DTQRAFRQ------AFE--K--PDFRTEHPVVRVHPETGERALLAGDFVRGFVGL--------------DGHESSVLLEL 226 (301)
T ss_dssp ----------------------CCCEEEEESEEECTTTCCEEECCSTTEEEETTS--------------CHHHHHHHHHH
T ss_pred ccchhhcc------ccc--c--cCCccccceEEECCCCCCeEEEeccccccccCC--------------CHHHHHHHHHH
Confidence 00000000 000 0 113457999999999999998764444444322 22345678888
Q ss_pred HHHHH--HHhcccccccCCCEEEEecccccccCCC-CCCCceeeecc
Q 020626 278 LMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRS-SSRPRHILASL 321 (323)
Q Consensus 278 l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~-f~g~Rr~l~~~ 321 (323)
|.+.+ ++++|+|+|++||++||||+++||+|+. |.+.+|+|.+.
T Consensus 227 L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R~ 273 (301)
T 3r1j_A 227 LQRRITMPENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHRI 273 (301)
T ss_dssp HHHHHTCGGGEEEECCCTTCEEEEETTSEEEEECCCSTTCCCEEEEE
T ss_pred HHHHhcCCCeEEEeeeCCCCEEEEEcCceeecccCCCCCCCeEEEEE
Confidence 87754 6899999999999999999999999986 44556666553
No 6
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-40 Score=299.54 Aligned_cols=246 Identities=17% Similarity=0.221 Sum_probs=165.7
Q ss_pred CCceEEecCCCCChhhHHHHHHhhHHHHHHHHhhccEEEEecCC-CCChhHHHHHHHHhCCCCCCCccCCCCceeecCce
Q 020626 20 PFPWVLTPNSTTNLSFLTETIRTQKPFLESLLLKAGAVLLRGFD-VKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRV 98 (323)
Q Consensus 20 ~~p~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~-~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v 98 (323)
.|+..|+...-.. .| .++..++|+++|.+||||+||||+ +.+++++.+|+++||.+.....+... .....++
T Consensus 26 ~~GaeI~gvdl~~--~l---~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~~~~~~a~~fG~l~~~~~g~~~-~v~~~~~- 98 (293)
T 3eat_X 26 RFGLLLEPGRPGM--HV---GELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVL-ELVEQEG- 98 (293)
T ss_dssp SSCEEEEESSTTC--BG---GGSCHHHHHHHHHHHSEEEECSCBCCSSHHHHHHHHHHHSCBCCBTTBSCE-EEEECTT-
T ss_pred CCceEEECCCCCc--Cc---CHHHHHHHHHHHHHhCEEEECCCCCCCCHHHHHHHHHHhCCCccccccCeE-EEEeCCC-
Confidence 4666666643210 12 234789999999999999999998 55899999999999987543333210 0000000
Q ss_pred eecCCCCCCCCccccCCCCCCCCCCcEEEeecccCCC--CCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecC
Q 020626 99 FTANESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPV--SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQE 176 (323)
Q Consensus 99 ~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~--~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~ 176 (323)
..+....+..+.||+|++|.+.||.+++|+|+++|+ .||+|.|||+++||+.|+ |+++++|+++.+.|... .
T Consensus 99 -~~~~~yt~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~ay~~L~---~~~~~~l~~~~~~~~~~--~ 172 (293)
T 3eat_X 99 -AEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLAD---SSELELWRRASGRYQRS--A 172 (293)
T ss_dssp -CCCTTTSCSCEEEECTTTTSSEEEEEEEEEEEECCSCCSBCCEEEEEHHHHHHHCC---HHHHHHHHHCEEEEECC---
T ss_pred -cccccccCCCccceECCCCcCCCCceEEEEeEeCCCCCCCCceEEeeHHHHHHhCC---HHHHHHHhhCceEEEec--c
Confidence 001112344688999999999999999999999997 899999999999999999 89999999887776511 0
Q ss_pred CCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEe-cCCCCceeeeeccchhccccccCC
Q 020626 177 KDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTY-DKIRQRKIWFNSIVMAYTCWKDTQ 255 (323)
Q Consensus 177 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~-hP~TG~~~lf~~~~~~~~~~~~~~ 255 (323)
. .+...... ..++ ..+...||+|++ ||+||+++||.+.++.++.++
T Consensus 173 ~---------~~~~~~~~--------------p~~~-------~~~~~~hp~Vr~~hP~tG~k~L~v~~~~~~i~g~--- 219 (293)
T 3eat_X 173 A---------HYSSRSAA--------------PIVE-------RHPRREFPILRFCEPPVEGDASFINPSEFHYDGI--- 219 (293)
T ss_dssp -------------CEEEE--------------ESEE-------ECTTTCCEEECCCCCC----------CCEEEESS---
T ss_pred c---------cccCccCC--------------ceEE-------ECCCCCcceEEecCCCCcccceecCccccccCCC---
Confidence 0 00000000 0000 011246999999 899999999865554444332
Q ss_pred CCCCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC-Cceeeeccc
Q 020626 256 NDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILASLC 322 (323)
Q Consensus 256 ~~~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g-~Rr~l~~~~ 322 (323)
..+.++++++.|.+.+ ++++|+|+|++||||||||+++||+|++|.+ .+|+|.+.+
T Consensus 220 -----------~~~es~~ll~~L~~~~~~p~~~~~~~w~~GDlviwDNr~vlH~r~~~~~~~~R~l~R~~ 278 (293)
T 3eat_X 220 -----------APEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVH 278 (293)
T ss_dssp -----------CTTTHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCBSSCCCEEEEEEE
T ss_pred -----------CHHHHHHHHHHHHHHHhCcccEEEEEcCCCCEEEEeCCceEEcccCCCCCCceEEEEEE
Confidence 2456678888888765 5799999999999999999999999999964 677776643
No 7
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=100.00 E-value=1.7e-39 Score=292.23 Aligned_cols=230 Identities=18% Similarity=0.230 Sum_probs=163.9
Q ss_pred hhhHHHHHHhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCC---CC--CC
Q 020626 33 LSFLTETIRTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANE---SS--LD 107 (323)
Q Consensus 33 ~~~l~~~~~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~---~~--~~ 107 (323)
..+|.++ + .++|+++|.+||+++||||++ +++++.+|+++||.+.. +.....++....+.|+..+. .+ +.
T Consensus 21 g~dl~~~-~--~~~l~~~l~~~G~v~~rg~~~-~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 95 (273)
T 1nx8_A 21 HRDFLEA-K--TETIKNLLMRQGFVVVKNLDI-DSDTFRDIYSAYGTIVE-YADEKIGVGFGYRDTLKLEGEKGKIVTGR 95 (273)
T ss_dssp HHHHHHS-C--HHHHHHHHHHHCEEEECSCCC-CHHHHHHHHHTTSEECC-C-----------CCSEEECCCTTCSTTSS
T ss_pred CCCcccC-C--HHHHHHHHHHCCEEEECCCCC-CHHHHHHHHHHhCCccc-cccccccCCCCCCceEEecCCCCCccccc
Confidence 4477777 3 899999999999999999998 89999999999997532 11100011111122332211 11 34
Q ss_pred CCccccCCCCCCCCCCcEEEeecccCCC--CCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCC
Q 020626 108 RNIPFHQEMALLPQFPSKLFFFCEVEPV--SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTG 185 (323)
Q Consensus 108 ~~~~~HtD~sy~~~pP~~~~L~c~~~p~--~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
..+.||||++|.+.||++++|+|+++|+ .||+|.|||+++||+.|+ ++.++.|+++...+... .
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~a~~~L~---~~~~~~l~~l~~~~~~~--~--------- 161 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMP---AHLLRVLEEETFEVRVL--E--------- 161 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEHHHHHHHSC---HHHHHHHHHSCEEEEEC------------
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhHHHHHHhCC---HHHHHHHhhcEEEEech--h---------
Confidence 5788999999999999999999999999 999999999999999999 67788888766555211 0
Q ss_pred CCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeee-------cc-chhccccccCCCC
Q 020626 186 RGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFN-------SI-VMAYTCWKDTQND 257 (323)
Q Consensus 186 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~-------~~-~~~~~~~~~~~~~ 257 (323)
.+|+..++. + ....||+ ++||+||+++||+ +. +..++.+
T Consensus 162 ~~~~~~~~~---------------------~-----~~~~~Pv-~~hp~tG~~~l~~~r~~~~~~~~~~~~i~~------ 208 (273)
T 1nx8_A 162 RGYYVDVSP---------------------D-----GWFKVPV-FTDLGWVRKMLIYFPFDEGQPASWEPRIVG------ 208 (273)
T ss_dssp -------------------------------------CEECCS-EEECSSCEEECCBCCCCTTSCCSEEEEETT------
T ss_pred cccccCCCc---------------------c-----cccCCCC-ccCCCCCceeEEeeeeccccCccccccCCC------
Confidence 012110000 0 0235899 9999999999876 43 3222211
Q ss_pred CCcceecCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCCC--Cceeeeccc
Q 020626 258 PVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSSR--PRHILASLC 322 (323)
Q Consensus 258 ~~~~~~~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g--~Rr~l~~~~ 322 (323)
...+.++++|+.|.+.+ ++++++|+|++||+|||||++++|||++|++ .+|+|.+++
T Consensus 209 --------~~~~e~~~~l~~l~~~~~~~~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R~~ 269 (273)
T 1nx8_A 209 --------FTDHETQAFFQELGAFLKQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQ 269 (273)
T ss_dssp --------CCHHHHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEEEE
T ss_pred --------CCHHHHHHHHHHHHHHhcCCceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEEee
Confidence 11234567888888877 7899999999999999999999999999975 577777654
No 8
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=100.00 E-value=7.8e-37 Score=287.17 Aligned_cols=228 Identities=20% Similarity=0.253 Sum_probs=163.5
Q ss_pred hHHHHH--HhhHHHHHHHHhhccEEEEecCCCCChhHHHHHHHHhCCCCCCCccCCCCceeecCceeecCCCCCCCCccc
Q 020626 35 FLTETI--RTQKPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTANESSLDRNIPF 112 (323)
Q Consensus 35 ~l~~~~--~~~~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~~~~~~~~~~~~ 112 (323)
++.+++ ++...+|.++|.+||||+||||++ +++++.+|+++||.+..++.|... .+.......+..+.+..+.|
T Consensus 127 ~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~-~~~~~~~~a~~~G~l~~~~~g~~~---~v~~~~~~~~~~yt~~~l~~ 202 (388)
T 3o2g_A 127 DFEDVLRYDEHAYKWLSTLKKVGIVRLTGASD-KPGEVSKLGKRMGFLYLTFYGHTW---QVQDKIDANNVAYTTGKLSF 202 (388)
T ss_dssp EHHHHHHCHHHHHHHHHHHHHHSEEEEECCCS-STTHHHHHHHHHSCCCCBTTBSSE---EESCCTTCSSGGGSSSCEEE
T ss_pred CHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCC-CHHHHHHHHHHhCCCccccCCCce---EEeecCCcCcccCccCCccc
Confidence 456665 356788899999999999999999 799999999999987654444211 11110001122234567899
Q ss_pred cCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEecCCCCCCCCCCCCccccc
Q 020626 113 HQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIF 192 (323)
Q Consensus 113 HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~~~~~~~~~~~~~~w~~~f 192 (323)
|||++|.+.||++++|+|+++|..||+|+|+|+.+||+.|+++.|+.++.|....+.|......
T Consensus 203 HtD~sy~~~pp~~~~L~c~~~~~~GG~T~~~d~~~a~~~L~~~~p~~~~~L~~~~~~~~~~~~~---------------- 266 (388)
T 3o2g_A 203 HTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVD---------------- 266 (388)
T ss_dssp ECSCTTSSSCCSEEEEEEEECCSSSCCEEEEEHHHHHHHHHHHCHHHHHHHTTCEEEEEEEEES----------------
T ss_pred ccCCCccCCCCcEEEEEEEecCCCCCcCeeecHHHHHHHhhhhCHHHHHHHhcCCcccEEecCC----------------
Confidence 9999999999999999999999999999999999999999999999999999765555321100
Q ss_pred ccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCc-eee-eeccchhccccccCCCCCCcceecCCCCCC
Q 020626 193 LTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQR-KIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPY 270 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~-~~l-f~~~~~~~~~~~~~~~~~~~~~~~~dg~~~ 270 (323)
... ..+...||+|++||. |+ +.+ ||......+. +.....
T Consensus 267 -----------------------~~~-~~~~~~~Pvv~~hp~-g~~~~l~~~~~~~~~i~--------------~l~~~~ 307 (388)
T 3o2g_A 267 -----------------------YCD-FSVQSKHKIIELDDK-GQVVRINFNNATRDTIF--------------DVPVER 307 (388)
T ss_dssp -----------------------SSE-EEEEEEEESEEECTT-SCEEEECCCTTTBCSCC--------------CSCHHH
T ss_pred -----------------------CCC-cceeeccCEEEEcCC-CCEEEEEeCcccccccC--------------CCCHHH
Confidence 001 234567999999995 55 444 3432211111 100011
Q ss_pred CH---HHHHHHHHHHH--HhcccccccCCCEEEEecccccccCCCCCC---Cceeeecc
Q 020626 271 PE---DIVYNLMKILE--EECVAIPWQNGDVLLIDNLAVLHARRSSSR---PRHILASL 321 (323)
Q Consensus 271 ~~---~~l~~l~~~~~--~~~~~~~w~~GDlli~DN~~~lH~R~~f~g---~Rr~l~~~ 321 (323)
.+ ++|+.|.+.+. +++++|+|+|||++||||+++||||++|++ .+|+|.+.
T Consensus 308 ~~~~~~al~~l~~~~~~p~~~~~~~~~pGd~vi~DNr~~lH~R~~f~~~~~~~R~L~r~ 366 (388)
T 3o2g_A 308 VQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISRHLEGA 366 (388)
T ss_dssp HHHHHHHHHHHHHHHHSTTTCEEECCCTTCEEEEETTTEEEEECCCCCCSSCSCEEEEE
T ss_pred HHHHHHHHHHHHHHhcChhhEEEEEcCCCcEEEEeCcEEeeCCCCcCCCCCCCEEEEEE
Confidence 12 46777777664 789999999999999999999999999973 35555543
No 9
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=99.97 E-value=2.1e-31 Score=248.04 Aligned_cols=215 Identities=15% Similarity=0.188 Sum_probs=146.5
Q ss_pred hhHHHHHHHHh---hccEEEEecCCCCChhH---------------------HHHHHHHhCCCCCCCccCCCCceeecCc
Q 020626 42 TQKPFLESLLL---KAGAVLLRGFDVKTAND---------------------FNDVVEAFGYEELPYVGGAAPRSHVVGR 97 (323)
Q Consensus 42 ~~~~~l~~~l~---~~Gvvl~rg~~~~~~e~---------------------~~~~~~~~G~~~~~~~g~~~~r~~~~~~ 97 (323)
+..++|++++. ++||++|||+++ +.++ +..|++.||... .+..... .....+
T Consensus 82 ~l~~~L~~~~~~~~~~Gvl~~rg~p~-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~~--~~~~~~ 157 (357)
T 2og5_A 82 TLRRDLAGFRRDSGPDGAIVLRGLPV-DSMGLPPTPRVNGSVQREASLGAAVLLMTACGLGDPG-AFLPEKN--GALVQD 157 (357)
T ss_dssp HHHHHHHHHHHCCTTTTEEEEECCCC-CTTTCCSCCCSTTCBCCSCCHHHHHHHHHHHHHSEEE-EETTSGG--GCSSEE
T ss_pred HHHHHHHHHHhcCCCCcEEEEcCCCC-chhhcCCCCCCccccccccchHHHHHHHHHHhhCCcc-cccccCC--CceEEE
Confidence 45778888877 599999999998 5444 457888888642 2110000 000011
Q ss_pred eeec------CCCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHH-HHHHHhhhhChHHHHHHHhCCeEE
Q 020626 98 VFTA------NESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSH-IVYERMKESYPEFVQQLEQDGLIY 170 (323)
Q Consensus 98 v~~~------~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~-~a~~~L~~~~pe~~~~L~~~~~~~ 170 (323)
|+.. +.......+.||||++|.+.||++++|+|+++|..||+|+|+|+. ++|+.|+ |++++.|++.. |
T Consensus 158 V~~~~~~~~~~~~~~~~~l~~HtD~sy~~~pP~~~~L~cl~~~~~GG~t~~~~~~~~al~~l~---p~~~~~L~~~~--~ 232 (357)
T 2og5_A 158 VVPVPGMEEFQGNAGSTLLTFHNENAFHEHRPDFVMLLCLRADPTGRAGLRTACVRRVLPLLS---DSTVDALWAPE--F 232 (357)
T ss_dssp ECCCTTCTTCSSTTCCSCEEEECTTTTCTTCCSEEEEEEEECCTTSCCCEEEEEHHHHGGGSC---HHHHHHHTSSC--E
T ss_pred EeeCCCcccccccccCccccccccCCCCCCCCCeEEEEEEccCCCCCccEEEeeHHHHHHhCC---HHHHHHHcCCC--e
Confidence 2211 111223678899999999999999999999999999999998865 7777777 99999999643 3
Q ss_pred EEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhccc
Q 020626 171 TRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTC 250 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~~ 250 (323)
..... .+|.. .. . ....||+|..||. |+.++||.....
T Consensus 233 ~~~~~----------~~~~~----~~------------------~------~~~~~pvv~~~~~-g~~l~~~~~~~~--- 270 (357)
T 2og5_A 233 RTAPP----------PSFQL----SG------------------P------EEAPAPVLLGDRS-DPDLRVDLAATE--- 270 (357)
T ss_dssp ECCCC----------GGGC----------------------------------CCBCSEEECSS-SEEECCBTTTCE---
T ss_pred EecCC----------ccccc----cc------------------C------CCCcceEEEeCCC-CCeEEEchhhcC---
Confidence 21110 11110 00 0 0235899999998 755556643211
Q ss_pred cccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCC----CCceeeeccc
Q 020626 251 WKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS----RPRHILASLC 322 (323)
Q Consensus 251 ~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~----g~Rr~l~~~~ 322 (323)
..++.+.++|+.|.+.+.+.+++|+|++||||||||+++||||++|+ +.+|+|.+++
T Consensus 271 ---------------~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDivi~DN~~vlH~R~~f~d~~~~~~R~L~R~~ 331 (357)
T 2og5_A 271 ---------------PVTERAAEALRELQAHFDATAVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQRTF 331 (357)
T ss_dssp ---------------ESSHHHHHHHHHHHHHHHHHCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCSCEEEEEE
T ss_pred ---------------CCCHHHHHHHHHHHHHHhhceEEEeeCCCCEEEEeCCccccCCCCCCCCCCCCCcEEEEEE
Confidence 11245678888998888778999999999999999999999999995 3466665543
No 10
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=99.97 E-value=8.3e-31 Score=241.06 Aligned_cols=215 Identities=18% Similarity=0.193 Sum_probs=143.1
Q ss_pred HHHHHHHHhhccEEEEecCCCCCh----------------------hHHHHHHHHhCCCCCCCccCCCCceeecCceeec
Q 020626 44 KPFLESLLLKAGAVLLRGFDVKTA----------------------NDFNDVVEAFGYEELPYVGGAAPRSHVVGRVFTA 101 (323)
Q Consensus 44 ~~~l~~~l~~~Gvvl~rg~~~~~~----------------------e~~~~~~~~~G~~~~~~~g~~~~r~~~~~~v~~~ 101 (323)
...|++.+.++|+++|||++++.. ..+..++..+|... .|.... ......+|++.
T Consensus 50 l~~i~~~~~~~G~~llrG~p~~~~~~~~~Tp~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~~~~--~~~~~~~V~~~ 126 (324)
T 1ds1_A 50 LDTFNAEGSEDGHLLLRGLPVEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHT-GYRELR--SGTVYHDVYPS 126 (324)
T ss_dssp HHHHHHHCCTTSEEEEESCCCCCGGGSCCCCCSSSCCTTCCCCHHHHHHHHHHHHHCEEE-EETTSG--GGCSSEEECCC
T ss_pred HHHHhccCCCCCEEEEcCCCCCccccCCCCCCCccccccccccHHHHHHHHHHHhcCCcc-cccccC--CCcEEEEEEEC
Confidence 444555566999999999998421 23445577777531 111000 00011123222
Q ss_pred C------CCCCCCCccccCCCCCCCCCCcEEEeecccCCCC-CCCcccccHHHHHHHhhhhChHHHHHHHhCCeEEEEEe
Q 020626 102 N------ESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVS-GGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIY 174 (323)
Q Consensus 102 ~------~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~-GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~~~~~~ 174 (323)
. ..+++..+.||||++|.+.||++++|+|+++|.. ||+|.|+|+++||+.|+ |++++.|.+. .+...+
T Consensus 127 ~~~~~~~~~~t~~~l~~HtD~sy~~~pP~~~~L~c~~~~~~GGg~T~~~~~~~a~~~L~---~~~~~~l~~~--~~~~~~ 201 (324)
T 1ds1_A 127 PGAHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKALPLLD---ERTRARLLDR--RMPCCV 201 (324)
T ss_dssp TTCCTTSTTCCSSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHHHHGGGSC---HHHHHHHBTC--CEEECC
T ss_pred CCCcccccccccCcccccccCCCCCCCCCeEEEEEeecCccCCceEEEeeHHHHHHhCC---HHHHHHHhcc--CccccC
Confidence 1 1355678999999999999999999999999998 89999999999999999 8888888753 232211
Q ss_pred cCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhcccccc
Q 020626 175 QEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKD 253 (323)
Q Consensus 175 ~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~ 253 (323)
...|.. +. ......||+|..+...+.+.+ |+....
T Consensus 202 --------------~~~~~~----------------------~~-~~~~~~hPvv~~~g~~~~~~~~~~~~~~------- 237 (324)
T 1ds1_A 202 --------------DVAFRG----------------------GV-DDPGAIAQVKPLYGDADDPFLGYDRELL------- 237 (324)
T ss_dssp --------------CGGGCC----------------------CC-CSGGGSEEECSEESCTTSCEECCBTTTB-------
T ss_pred --------------Chhhcc----------------------CC-cCccccCCeEEEeCCCCCceEEECCccC-------
Confidence 111110 00 001235787766665555444 332110
Q ss_pred CCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCCC----Cceeeecc
Q 020626 254 TQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSR----PRHILASL 321 (323)
Q Consensus 254 ~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~g----~Rr~l~~~ 321 (323)
...++.+.++|+.|.+++.+++++|+|++||||||||+++||||++|++ .+|+|.++
T Consensus 238 -----------~~~~~~~~~al~~l~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~ 298 (324)
T 1ds1_A 238 -----------APEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRV 298 (324)
T ss_dssp -----------CCCSHHHHHHHHHHHHHHHHTCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEE
T ss_pred -----------CCCCHHHHHHHHHHHHHHHhccEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEE
Confidence 0123456789999998888999999999999999999999999999975 35666554
No 11
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=99.96 E-value=2e-30 Score=241.67 Aligned_cols=229 Identities=17% Similarity=0.157 Sum_probs=143.3
Q ss_pred HHHHHHHhhc------cEEEEecCCCCChhH----------------------HHHHHHHhCCCCCCCccCCCCceeecC
Q 020626 45 PFLESLLLKA------GAVLLRGFDVKTAND----------------------FNDVVEAFGYEELPYVGGAAPRSHVVG 96 (323)
Q Consensus 45 ~~l~~~l~~~------Gvvl~rg~~~~~~e~----------------------~~~~~~~~G~~~~~~~g~~~~r~~~~~ 96 (323)
+.|+++|.++ |+++|||+++ +.++ +..++..+|... .|.... ...+..
T Consensus 69 ~~l~~~L~~~~~~~~~G~ll~RGl~v-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~--~g~~~~ 144 (358)
T 2wbq_A 69 KRLRTFMARARLDAWPHALVVRGNPV-DDAALGSTPVHWRTARTPGSRPLSFLLMLYAGLLGDVF-GWATQQ--DGRVVT 144 (358)
T ss_dssp HHHHHHHHHHTTCSSCSEEEEECCCC-CHHHHCSCCSSSTTCCCGGGHHHHHHHHHHHHTTCEEE-EETTSG--GGCSSE
T ss_pred HHHHHHHHHhhcCCCCCEEEEeCCCc-chhhcCCCCCCCccccccccchHHHHHHHHHHhcCCce-EEeecC--CCCEEE
Confidence 4677777777 9999999998 4432 345556666531 121100 111112
Q ss_pred ceeecC-------CCCCCCCccccCCCCCCCCCCcEEEeecccCCCCCCCcccccHHHHHHHhhhhChHHHHHHHhCCeE
Q 020626 97 RVFTAN-------ESSLDRNIPFHQEMALLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLI 169 (323)
Q Consensus 97 ~v~~~~-------~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~L~~~~~~ 169 (323)
+|+... ..+++..+.||||++|.+.||++++|+|+++|. ||+|.|||+..+ .|+ |++++.|++..
T Consensus 145 ~V~~~~~~~~~~~~~~t~~~l~~HtD~sy~~~pp~~~~L~cl~~p~-gG~T~~ad~~~~--~l~---p~~~~~L~~~~-- 216 (358)
T 2wbq_A 145 DVLPIKGGEHTLVSSSSRQELGWHTEDAFSPYRADYVGLLSLRNPD-GVATTLAGVPLD--DLD---ERTLDVLFQER-- 216 (358)
T ss_dssp EECCCTTCTTSSSTTCCSSCEEEECTTTTCTTCCSEEEEEEEECTT-CCEEEEEECCTT--TCC---HHHHHHHTSSC--
T ss_pred eeeeCCCCccccccCCCCCCccccccCCCCCCCCCeEEEEeEecCC-CCCceEEechhh--hCC---HHHHHHHhCCC--
Confidence 233221 123445789999999999999999999999999 999999998864 666 99999999644
Q ss_pred EEEEecCCCCCCCCCCCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceeeeeccchhcc
Q 020626 170 YTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYT 249 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~lf~~~~~~~~ 249 (323)
|.+..... ...+...+...+..+.+... +|..++ ..||++..|| |++.++.+.....+
T Consensus 217 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~hpvv~~~~--~~~~l~~~~~~~~~ 274 (358)
T 2wbq_A 217 FLIRPDDS-------HLQVNNSTAQQGRVEFEGIA-------QAADRP------EPVAILTGHR--AAPHLRVDGDFSAP 274 (358)
T ss_dssp EECCCCGG-------GSGGGCC-----CTHHHHHH-------HHHHSC------CCBCSEEEET--TEEEECCBTTTCEE
T ss_pred eEEcCCcc-------cccccccccccchhhhhhhh-------hhccCC------CcceeeeCCC--CCCcEEECcccccc
Confidence 33221100 00111111111111111000 111222 2589998887 77776432211111
Q ss_pred ccccCCCCCCcceecCCCCCCCHHHHHHHHHHHHHhcccccccCCCEEEEecccccccCCCCC----CCceeeeccc
Q 020626 250 CWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS----RPRHILASLC 322 (323)
Q Consensus 250 ~~~~~~~~~~~~~~~~dg~~~~~~~l~~l~~~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f~----g~Rr~l~~~~ 322 (323)
...++.+.++|+.|.+.+.+++++|+|++|||+||||+++||+|++|+ +.+|+|.+++
T Consensus 275 ---------------~~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDv~i~DNr~vlH~R~~f~~~~~~~~R~L~R~~ 336 (358)
T 2wbq_A 275 ---------------AEGDEEAAAALGTLRKLIDASLYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLKRIN 336 (358)
T ss_dssp ---------------STTCHHHHHHHHHHHHHHHHHCEEEECCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEEE
T ss_pred ---------------CCCCHHHHHHHHHHHHHHHhhceEEeecCCCEEEEeCcccccCCCCCCCCCCCCCceEEEEE
Confidence 122356678999999888889999999999999999999999999995 4466666553
No 12
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=99.90 E-value=3.9e-24 Score=191.25 Aligned_cols=202 Identities=17% Similarity=0.233 Sum_probs=133.4
Q ss_pred HHHHHHHHhh--ccEEEEecCCC---CChhHHHHHHHHhCCC-CCCC----ccCCCCceeecCceeecCCC---CCCCCc
Q 020626 44 KPFLESLLLK--AGAVLLRGFDV---KTANDFNDVVEAFGYE-ELPY----VGGAAPRSHVVGRVFTANES---SLDRNI 110 (323)
Q Consensus 44 ~~~l~~~l~~--~Gvvl~rg~~~---~~~e~~~~~~~~~G~~-~~~~----~g~~~~r~~~~~~v~~~~~~---~~~~~~ 110 (323)
.+++...+.. +|++++.+.++ .+.+++.+++++||.+ ..+. .|..-.+-.+.... .++.. +-+ .+
T Consensus 66 ~~~l~~i~~~r~~G~~~i~~~~~~~~~~~~~~~~l~~riG~i~r~t~~D~~yG~~~a~f~V~~~~-~~~~~l~~AYT-~L 143 (311)
T 1jr7_A 66 QPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVD-NSDSYLRQPHR-VM 143 (311)
T ss_dssp HHHHHHHHHCTTCCEEEEEETTCCSGGGHHHHHHHHHHHHHHHEEECCBTTTTBSSEEEEECCC------CTTCTTC-CE
T ss_pred HHHHHHHHHHhceeEEEEEccCCCCCCCHHHHHHHHHHheeccccCCcccCCCceEeeEEEEecC-Cccccchhhcc-CC
Confidence 4555555543 89888877763 3678899999999987 4443 34221111111111 11111 112 89
Q ss_pred cccCCCCCCCCCCcEEEee-cccCCCCCCCcccccHHHHHHHhhhhChHHHHH-----HHhCCeEEEEEecCCCCCCCCC
Q 020626 111 PFHQEMALLPQFPSKLFFF-CEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQ-----LEQDGLIYTRIYQEKDDLTSPT 184 (323)
Q Consensus 111 ~~HtD~sy~~~pP~~~~L~-c~~~p~~GGeT~~ad~~~a~~~L~~~~pe~~~~-----L~~~~~~~~~~~~~~~~~~~~~ 184 (323)
+||||++|.+.+|++++|+ |++.+.+||+|.| |.+++||.++. |.+..+.|.. +.+
T Consensus 144 ~lHTDg~Y~~~~pg~qlLH~Cl~~~~~GGeS~l---------Lr~~dPe~f~~~~~~~L~~~~v~~~~--~~~------- 205 (311)
T 1jr7_A 144 ELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLL---------LHLDDWEHLDNYFRHPLARRPMRFAA--PPS------- 205 (311)
T ss_dssp EEECSCTTSSSCCCEEEEEEEEEESCCBCCEEE---------EEGGGCTTHHHHHTSGGGGSCEEECC--SSC-------
T ss_pred CcccCCCCCCCCccHHHHHHHHhccCCCceeee---------chhhCHHHHhcccccCceeceEEeec--cCC-------
Confidence 9999999999999999999 9999999999999 99999999999 8877766641 010
Q ss_pred CCCcccccccCChHHHHHHHHHcCCcEEEecCCceEEEEeeeCeeEecCCCCceee-eeccchhccccccCCCCCCccee
Q 020626 185 GRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVT 263 (323)
Q Consensus 185 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~v~~hP~TG~~~l-f~~~~~~~~~~~~~~~~~~~~~~ 263 (323)
++ ......+|+|..++. |+..+ ||....
T Consensus 206 -------------------------------~~--~~~~~~~PVi~ld~~-G~l~IRyn~~~r----------------- 234 (311)
T 1jr7_A 206 -------------------------------KN--VSKDVFHPVFDVDQQ-GRPVMRYIDQFV----------------- 234 (311)
T ss_dssp -------------------------------TT--CCCCEEECSEEECTT-SCEEECCCTTTE-----------------
T ss_pred -------------------------------Cc--eeeEeecCEEEECCC-CCEEEEeCCCCC-----------------
Confidence 00 112345799998875 77653 332110
Q ss_pred cCCCCCCCHHHHHHHHHHH--HHhcccccccCCCEEEEecccccccCCCCC---CC-cee
Q 020626 264 FGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS---RP-RHI 317 (323)
Q Consensus 264 ~~dg~~~~~~~l~~l~~~~--~~~~~~~~w~~GDlli~DN~~~lH~R~~f~---g~-Rr~ 317 (323)
..........+..+.+.+ +++++.|+|+|||+||+||+++||||++|+ |. |++
T Consensus 235 -~p~~~~~~~Yl~~f~~~l~dp~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L 293 (311)
T 1jr7_A 235 -QPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL 293 (311)
T ss_dssp -ECCSHHHHHHHHHHHHHHHTCTTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEE
T ss_pred -CCHHHHHHHHHHHHHHHhcCcccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEE
Confidence 000111122355555543 468999999999999999999999999997 44 555
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=69.36 E-value=4.5 Score=35.66 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=25.1
Q ss_pred HHHHhcccccccCCCEEEEecccccccCCCC
Q 020626 281 ILEEECVAIPWQNGDVLLIDNLAVLHARRSS 311 (323)
Q Consensus 281 ~~~~~~~~~~w~~GDlli~DN~~~lH~R~~f 311 (323)
.++.+.....++|||+|++| ..++||..+.
T Consensus 228 ~le~~~~ewd~epGDav~F~-~~tlHga~pl 257 (344)
T 3nnf_A 228 TIKDGYEEDEYNLGDAFFFN-KYVLHQSVPL 257 (344)
T ss_dssp HHTTCEEECCBCTTCEEEEE-TTCEEEECCB
T ss_pred hhhhhhccccCCCCcEEEEe-cceeecCCCC
Confidence 45678899999999999996 6789998854
No 14
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=65.30 E-value=3.6 Score=35.73 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=25.1
Q ss_pred hcccccccCCCEEEEecccccccCCCCC-C-Ccee
Q 020626 285 ECVAIPWQNGDVLLIDNLAVLHARRSSS-R-PRHI 317 (323)
Q Consensus 285 ~~~~~~w~~GDlli~DN~~~lH~R~~f~-g-~Rr~ 317 (323)
..+....++||++|+|.+ ++|+..+-. + .|+.
T Consensus 226 ~~v~~~~~aGd~~~f~~~-~~H~s~~N~s~~~R~~ 259 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGE-VVHKSKQNLSDRSRQA 259 (291)
T ss_dssp GCEEECBCTTCEEEEETT-CEEEECCBCSSSCCCE
T ss_pred CeeecccCCCcEEEEcCC-ceecCCCCCCCCceEE
Confidence 467789999999999997 999987653 3 4543
No 15
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=62.43 E-value=9.1 Score=33.79 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=24.9
Q ss_pred cccccccCCCEEEEecccccccCCCC-CC-Cceee
Q 020626 286 CVAIPWQNGDVLLIDNLAVLHARRSS-SR-PRHIL 318 (323)
Q Consensus 286 ~~~~~w~~GDlli~DN~~~lH~R~~f-~g-~Rr~l 318 (323)
.+....++||++|+|.+ ++||..+- ++ .|+.+
T Consensus 229 ~v~~~~~aGdvl~f~~~-~~H~s~~N~S~~~R~~l 262 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESN-TMHGSTSNITPYPRNNL 262 (310)
T ss_dssp CBCCCBSTTCEEEEETT-CCEEECCCCSSCCCCEE
T ss_pred eEEeeeCCceEEEEeCC-ceecCCCCCCCCCeEEE
Confidence 57889999999999995 99998765 33 55543
No 16
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=54.38 E-value=6.9 Score=34.33 Aligned_cols=27 Identities=19% Similarity=0.358 Sum_probs=23.0
Q ss_pred hcccccccCCCEEEEecccccccCCCCC
Q 020626 285 ECVAIPWQNGDVLLIDNLAVLHARRSSS 312 (323)
Q Consensus 285 ~~~~~~w~~GDlli~DN~~~lH~R~~f~ 312 (323)
..+....++||++|+|.+ ++|+..+-.
T Consensus 218 ~~v~~~~~aGd~v~f~~~-l~H~s~~N~ 244 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWST-LMHASYPHS 244 (313)
T ss_dssp GCEEECBCTTEEEEEETT-SEEEECCBC
T ss_pred ceeEeeeCCceEEEEeCC-ceeeCCCCC
Confidence 457789999999999995 999987654
No 17
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=52.21 E-value=7.5 Score=33.54 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=24.3
Q ss_pred HHHHHHHHhhccEEEEecCCCCChhHHHHHHHHh
Q 020626 44 KPFLESLLLKAGAVLLRGFDVKTANDFNDVVEAF 77 (323)
Q Consensus 44 ~~~l~~~l~~~Gvvl~rg~~~~~~e~~~~~~~~~ 77 (323)
.+++.+.+.+.|+|+++|+= +.++..++.+.+
T Consensus 21 ~~~~~~~f~~dGyvvl~~~l--~~e~v~~l~~~~ 52 (288)
T 2rdq_A 21 RAALDSFYEEHGYLFLRNVL--DRDLVKTVAEQM 52 (288)
T ss_dssp HHHHHHHHHHHSEEEECSCS--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEeCCC--CHHHHHHHHHHH
Confidence 45677899999999999984 667666665554
No 18
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=51.69 E-value=5.4 Score=35.76 Aligned_cols=19 Identities=37% Similarity=0.562 Sum_probs=17.0
Q ss_pred ccCCCEEEEecccccccCC
Q 020626 291 WQNGDVLLIDNLAVLHARR 309 (323)
Q Consensus 291 w~~GDlli~DN~~~lH~R~ 309 (323)
+++||++|++|.+|+-+|-
T Consensus 52 L~~GDlLV~NdTrVipARL 70 (345)
T 1wdi_A 52 LRPGDVLVFNESKVIPARL 70 (345)
T ss_dssp CCTTCEEEEEEEEECCEEE
T ss_pred cCCCCEEEecCceEEeeEE
Confidence 6899999999999987774
No 19
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=51.35 E-value=5.8 Score=35.51 Aligned_cols=20 Identities=30% Similarity=0.438 Sum_probs=17.8
Q ss_pred cccCCCEEEEecccccccCC
Q 020626 290 PWQNGDVLLIDNLAVLHARR 309 (323)
Q Consensus 290 ~w~~GDlli~DN~~~lH~R~ 309 (323)
-+++||++|++|.+|+-+|-
T Consensus 61 ~L~~GDlLV~NdTrVipARL 80 (347)
T 1vky_A 61 YLEPGDLLVLNVSKVIPARL 80 (347)
T ss_dssp GCCTTCEEEEEEEECCSCEE
T ss_pred hcCCCCEEEecCceEEeeEE
Confidence 47899999999999988775
No 20
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=51.03 E-value=8.6 Score=33.62 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=24.9
Q ss_pred hcccccccCCCEEEEecccccccCCCCC-C-Cceee
Q 020626 285 ECVAIPWQNGDVLLIDNLAVLHARRSSS-R-PRHIL 318 (323)
Q Consensus 285 ~~~~~~w~~GDlli~DN~~~lH~R~~f~-g-~Rr~l 318 (323)
..+....++||++|+|. +++|+..+-. + .|+.+
T Consensus 214 ~~v~~~~~aGd~vlf~~-~~~H~s~~N~s~~~R~~~ 248 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHP-LLIHGSGQNKTQGFRKAI 248 (308)
T ss_dssp CCEEECBCTTCEEEECT-TCCEEECCBCSSSCEEEE
T ss_pred CeEEccCCCccEEEECC-CccccCCCCCCCCceEEE
Confidence 35678899999999999 5999987653 3 45543
No 21
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=48.93 E-value=5.4 Score=35.74 Aligned_cols=20 Identities=40% Similarity=0.610 Sum_probs=17.8
Q ss_pred cccCCCEEEEecccccccCC
Q 020626 290 PWQNGDVLLIDNLAVLHARR 309 (323)
Q Consensus 290 ~w~~GDlli~DN~~~lH~R~ 309 (323)
-+++||++|++|.+|+-+|-
T Consensus 53 ~L~~GDlLV~NdTrVipARL 72 (346)
T 1yy3_A 53 FFNEGDCLVLNNTRVLPARL 72 (346)
T ss_dssp GCCTTEEEEECCCCSCCEEE
T ss_pred hcCCCCEEEecCceEEeeEE
Confidence 47899999999999988875
No 22
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=37.01 E-value=14 Score=30.78 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=29.4
Q ss_pred cccccccCCCEEEEec--------ccccccCCCC-CCCceeeecc
Q 020626 286 CVAIPWQNGDVLLIDN--------LAVLHARRSS-SRPRHILASL 321 (323)
Q Consensus 286 ~~~~~w~~GDlli~DN--------~~~lH~R~~f-~g~Rr~l~~~ 321 (323)
.+.++-++|++|+|.| .+++|+..|- .|.|.++..+
T Consensus 165 ~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W 209 (216)
T 3itq_A 165 NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW 209 (216)
T ss_dssp TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence 5678889999999999 4899999986 4888776543
No 23
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=36.55 E-value=21 Score=31.51 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=22.0
Q ss_pred hcccccccCCCEEEEecccccccCCCCC
Q 020626 285 ECVAIPWQNGDVLLIDNLAVLHARRSSS 312 (323)
Q Consensus 285 ~~~~~~w~~GDlli~DN~~~lH~R~~f~ 312 (323)
..+....++||++|+|.+ ++|+..+-.
T Consensus 220 ~~v~~~~~aGd~v~f~~~-~~H~s~~N~ 246 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSN-TMHASLPHT 246 (319)
T ss_dssp -CCBCCBCTTEEEEEETT-SCEEECCCC
T ss_pred ceeEeeECCCeEEEEcCC-ccccCCCCC
Confidence 467889999999999985 899977654
No 24
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=30.85 E-value=22 Score=29.47 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=29.6
Q ss_pred hcccccccCCCEEEEec--------ccccccCCCC-CCCceeeec
Q 020626 285 ECVAIPWQNGDVLLIDN--------LAVLHARRSS-SRPRHILAS 320 (323)
Q Consensus 285 ~~~~~~w~~GDlli~DN--------~~~lH~R~~f-~g~Rr~l~~ 320 (323)
..+.++-++|++|||-| .+++|+..+- .|.|.++..
T Consensus 169 ~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~ 213 (224)
T 2jig_A 169 RGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATK 213 (224)
T ss_dssp GSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEE
T ss_pred CceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEE
Confidence 45788899999999998 7999999987 477766554
No 25
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=30.26 E-value=22 Score=27.39 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=10.8
Q ss_pred cccCCCEEEEecc
Q 020626 290 PWQNGDVLLIDNL 302 (323)
Q Consensus 290 ~w~~GDlli~DN~ 302 (323)
..+|||+|+|.+.
T Consensus 89 ~~~pGDlvff~~~ 101 (142)
T 3gt2_A 89 QARKGDLIFYGPE 101 (142)
T ss_dssp GCCTTCEEEESGG
T ss_pred hCCCCCEEEeCCC
Confidence 6899999999743
No 26
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=29.44 E-value=21 Score=29.76 Aligned_cols=37 Identities=11% Similarity=0.013 Sum_probs=25.9
Q ss_pred CCccccCCCCCCCCC-----CcEEEeecccCCCCCCCccccc
Q 020626 108 RNIPFHQEMALLPQF-----PSKLFFFCEVEPVSGGDTPLVL 144 (323)
Q Consensus 108 ~~~~~HtD~sy~~~p-----P~~~~L~c~~~p~~GGeT~~ad 144 (323)
....+|.|......+ -.++++..+..+..||+|.|-+
T Consensus 122 ~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 163 (216)
T 3itq_A 122 QQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK 163 (216)
T ss_dssp CCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT
T ss_pred CccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC
Confidence 345689997654321 1367777777788999999965
No 27
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=25.22 E-value=30 Score=29.58 Aligned_cols=22 Identities=32% Similarity=0.314 Sum_probs=19.8
Q ss_pred cccCCCEEEEecccccccCCCC
Q 020626 290 PWQNGDVLLIDNLAVLHARRSS 311 (323)
Q Consensus 290 ~w~~GDlli~DN~~~lH~R~~f 311 (323)
-.++||.+++|-.+++|+.++-
T Consensus 203 l~~p~d~llv~D~~~~H~vTpI 224 (254)
T 3pl0_A 203 LEQPWTVLLLDDQQVIHESTPL 224 (254)
T ss_dssp CCSTTCEEEEETTTEEEEECCE
T ss_pred ecCCCcEEEEeCCcccCCCCcc
Confidence 4589999999999999999875
No 28
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=25.01 E-value=37 Score=27.85 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=23.3
Q ss_pred ccccccCCCEEEEecccccccC-CCCCCCceeee
Q 020626 287 VAIPWQNGDVLLIDNLAVLHAR-RSSSRPRHILA 319 (323)
Q Consensus 287 ~~~~w~~GDlli~DN~~~lH~R-~~f~g~Rr~l~ 319 (323)
-.+.|++|.++++|. +..|.. ..-++.|.+|.
T Consensus 146 ~~~~w~eGe~~~fDd-s~~Hev~N~~d~~RvvL~ 178 (197)
T 3rcq_A 146 ETKTWEEGKVLIFDD-SFEHEVWQDASSFRLIFI 178 (197)
T ss_dssp EEECCCBTCEEEECT-TSCEEEEECSSSCEEEEE
T ss_pred EEEEeeCCcEEEEcC-CeEEEEEECCCCCEEEEE
Confidence 367999999999999 667765 33445666553
No 29
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=24.62 E-value=25 Score=26.90 Aligned_cols=12 Identities=25% Similarity=0.548 Sum_probs=10.1
Q ss_pred cccCCCEEEEec
Q 020626 290 PWQNGDVLLIDN 301 (323)
Q Consensus 290 ~w~~GDlli~DN 301 (323)
.+||||||+|.+
T Consensus 67 ~l~pGDLvFf~~ 78 (135)
T 2k1g_A 67 NLRTGDLVLFRA 78 (135)
T ss_dssp GCCTTEEEEEEE
T ss_pred HccCCcEEEECC
Confidence 689999999963
No 30
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=24.55 E-value=33 Score=28.39 Aligned_cols=37 Identities=16% Similarity=0.080 Sum_probs=24.5
Q ss_pred CCccccCCCCCCCC--------CCcEEEeecccCCCCCCCccccc
Q 020626 108 RNIPFHQEMALLPQ--------FPSKLFFFCEVEPVSGGDTPLVL 144 (323)
Q Consensus 108 ~~~~~HtD~sy~~~--------pP~~~~L~c~~~p~~GGeT~~ad 144 (323)
....+|.|...... .-.+++|.-+..+..||+|.|-+
T Consensus 109 ~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 153 (224)
T 2jig_A 109 QKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPN 153 (224)
T ss_dssp CCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETT
T ss_pred ccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCC
Confidence 34568999765431 11256666667777999999965
No 31
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=22.54 E-value=84 Score=21.48 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=20.5
Q ss_pred cEEEEecCCCC-ChhHHHHHHHHhCC
Q 020626 55 GAVLLRGFDVK-TANDFNDVVEAFGY 79 (323)
Q Consensus 55 Gvvl~rg~~~~-~~e~~~~~~~~~G~ 79 (323)
-.|+++|+|.. +.+++..+...+|.
T Consensus 2 ~~i~v~nLp~~~te~~l~~~F~~~G~ 27 (91)
T 2lxi_A 2 NIVMLRMLPQAATEDDIRGQLQSHGV 27 (91)
T ss_dssp CEEEEETCCSSCCHHHHHHHHHHHTC
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhCC
Confidence 36899999853 78899999999983
No 32
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=22.33 E-value=85 Score=26.61 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=21.9
Q ss_pred cccccccCCCEEEEecccccccCCCCC
Q 020626 286 CVAIPWQNGDVLLIDNLAVLHARRSSS 312 (323)
Q Consensus 286 ~~~~~w~~GDlli~DN~~~lH~R~~f~ 312 (323)
.+....++||++|+|. .++|+..+-.
T Consensus 210 ~v~~~~~aGdv~lf~~-~~~H~s~~N~ 235 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHA-HMCHKSIPNL 235 (288)
T ss_dssp EECCCCCTTCEEEEET-TCCEEEECCC
T ss_pred eeecccCCCCEEEEeC-CceecCCCCC
Confidence 4677889999999999 5999987653
No 33
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=21.04 E-value=39 Score=28.03 Aligned_cols=20 Identities=25% Similarity=0.358 Sum_probs=15.0
Q ss_pred cccCCCEEEE------------ecccccccCC
Q 020626 290 PWQNGDVLLI------------DNLAVLHARR 309 (323)
Q Consensus 290 ~w~~GDlli~------------DN~~~lH~R~ 309 (323)
..++||||+| .|-.++|+..
T Consensus 158 ~lqpGDLVff~~g~~~HVgIYlG~g~~IHA~~ 189 (214)
T 3pbi_A 158 EAKRGDLIFYGPGGGQHVTLYLGNGQMLEASG 189 (214)
T ss_dssp GCCTTCEEEESGGGCSEEEEEEETTEEEEEET
T ss_pred hCCCCCEEEecCCCCCEEEEEecCCEEEEECC
Confidence 6899999999 4556677643
Done!