Query 020629
Match_columns 323
No_of_seqs 157 out of 470
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 03:54:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02841 GPI mannosyltransfera 100.0 1.4E-66 3E-71 514.8 26.3 274 34-308 9-284 (440)
2 KOG3893 Mannosyltransferase [C 100.0 1.8E-59 3.9E-64 442.9 17.2 249 33-307 21-269 (405)
3 PF06728 PIG-U: GPI transamida 100.0 2.1E-42 4.5E-47 340.5 22.3 240 39-306 2-264 (382)
4 KOG2552 Major facilitator supe 100.0 6E-33 1.3E-37 266.8 19.3 230 30-304 14-268 (388)
5 PF05007 Mannosyl_trans: Manno 100.0 6.4E-31 1.4E-35 246.0 13.6 125 155-307 1-125 (259)
6 TIGR03459 crt_membr carotene b 99.1 8.5E-09 1.8E-13 104.1 18.1 148 56-209 92-266 (470)
7 PF09594 DUF2029: Protein of u 98.7 8.1E-07 1.7E-11 80.3 17.0 118 89-207 1-122 (241)
8 PRK13375 pimE mannosyltransfer 98.7 2.1E-06 4.6E-11 86.0 20.6 197 35-290 22-237 (409)
9 COG5650 Predicted integral mem 98.0 1.6E-05 3.5E-10 81.2 7.6 111 143-295 201-311 (536)
10 COG5542 Predicted integral mem 97.7 0.00037 8.1E-09 69.6 11.9 103 108-210 117-220 (420)
11 PF02366 PMT: Dolichyl-phospha 97.5 0.0024 5.1E-08 59.0 12.9 161 36-201 3-187 (245)
12 PF05208 ALG3: ALG3 protein; 97.4 0.011 2.4E-07 58.7 17.8 143 59-210 19-178 (368)
13 PF09852 DUF2079: Predicted me 97.3 0.023 4.9E-07 57.6 18.2 146 63-210 8-165 (449)
14 PF13231 PMT_2: Dolichyl-phosp 97.2 0.0055 1.2E-07 51.5 11.4 118 91-209 2-129 (159)
15 PF04188 Mannosyl_trans2: Mann 96.9 0.023 5E-07 57.7 14.7 89 117-206 122-210 (443)
16 COG1807 ArnT 4-amino-4-deoxy-L 95.8 0.24 5.3E-06 50.9 14.9 116 87-203 60-186 (535)
17 KOG2762 Mannosyltransferase [C 95.7 0.23 5E-06 49.3 13.3 149 59-212 47-208 (429)
18 TIGR03663 conserved hypothetic 95.1 0.99 2.1E-05 46.0 16.0 148 35-196 6-164 (439)
19 COG3463 Predicted membrane pro 94.4 1.3 2.8E-05 45.1 14.5 149 58-210 30-191 (458)
20 PRK13279 arnT 4-amino-4-deoxy- 94.3 0.76 1.7E-05 48.2 13.1 139 66-205 32-189 (552)
21 KOG2647 Predicted Dolichyl-pho 93.4 1.3 2.8E-05 45.0 12.3 132 70-202 74-219 (444)
22 COG4346 Predicted membrane-bou 92.7 2.1 4.5E-05 42.7 12.4 68 141-209 188-255 (438)
23 PF03901 Glyco_transf_22: Alg9 91.7 15 0.00033 36.5 19.3 98 111-209 85-194 (418)
24 PF10131 PTPS_related: 6-pyruv 90.3 17 0.00037 38.8 17.2 91 110-201 26-125 (616)
25 PF03155 Alg6_Alg8: ALG6, ALG8 89.3 29 0.00064 35.9 18.1 104 108-212 99-209 (469)
26 TIGR03766 conserved hypothetic 88.3 14 0.00031 37.9 14.6 160 34-207 69-248 (483)
27 KOG2575 Glucosyltransferase - 80.6 43 0.00094 34.4 13.3 102 108-211 136-243 (510)
28 PF09913 DUF2142: Predicted me 57.9 1.9E+02 0.0042 28.2 13.3 90 109-205 123-222 (389)
29 KOG2576 Glucosyltransferase - 54.7 22 0.00048 36.3 5.1 99 114-212 105-207 (500)
30 KOG3359 Dolichyl-phosphate-man 49.6 3.9E+02 0.0085 29.4 14.5 46 161-206 173-232 (723)
31 PLN02816 mannosyltransferase 46.8 3.8E+02 0.0082 28.4 20.5 66 143-208 153-227 (546)
32 PF14897 EpsG: EpsG family 46.3 2.5E+02 0.0053 26.1 12.7 125 66-196 24-151 (330)
33 PF11028 DUF2723: Protein of u 43.3 1.4E+02 0.0031 26.8 8.0 69 141-209 87-166 (178)
34 PF14264 Glucos_trans_II: Gluc 43.2 2.9E+02 0.0064 26.1 13.2 102 107-210 49-157 (319)
35 PF11847 DUF3367: Domain of un 39.8 3.8E+02 0.0082 29.3 11.7 96 114-209 80-187 (680)
36 COG1287 Uncharacterized membra 30.6 7.6E+02 0.016 27.1 15.7 36 64-99 50-95 (773)
37 COG4745 Predicted membrane-bou 29.4 5.1E+02 0.011 27.3 10.2 129 74-210 50-196 (556)
38 PF11085 YqhR: Conserved membr 22.7 5.3E+02 0.011 23.4 8.0 67 108-174 71-144 (173)
No 1
>PLN02841 GPI mannosyltransferase
Probab=100.00 E-value=1.4e-66 Score=514.82 Aligned_cols=274 Identities=68% Similarity=1.228 Sum_probs=237.2
Q ss_pred HHHHHHHHHHHHHHHHhcccccccceeeecCCcchhHhHHHHHHhCCCCCCCCCCcccchhHHHHHhccchhhhhhHHHH
Q 020629 34 RSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFL 113 (323)
Q Consensus 34 ~~~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy~rl~DG~~l~~~G~sPY~~~tyhytPLLl~ll~p~~~~~p~~~kll 113 (323)
..++++|+++|++++.||++||+|+||||||+||+|++||++++.+|.|||+|+||||||||++++.||...++.+||++
T Consensus 9 ~~vll~a~~lRl~L~~yg~~~D~~~eVsytdidY~vftDga~lv~~G~SPY~r~TYrytPLLa~LllPn~~~~~~fgk~L 88 (440)
T PLN02841 9 RSLLLASALLRVALIVYGEWQDAHMEVRYTDVDYLVFSDAAALVASGKSPFARDTYRYSPLLALLLVPNSLLHRSWGKFL 88 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCccccccccchHHHHHHHHHHHcCCCCCCCCCCCcChHHHHHHcchhhhhhhHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999987788999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Q 020629 114 FSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVH 193 (323)
Q Consensus 114 f~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~ 193 (323)
|+++|+++|+++.++++.++.+++.+...+++|||||++|++|+|||+|++.+++++.++|++.+||...||+++|+++|
T Consensus 89 F~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti~istrGSse~i~~~lvl~~L~~l~~g~~~~Aa~~lglavh 168 (440)
T PLN02841 89 FSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTFTIGTRGNCEPIVCAVILWILICLMNGRLLQAAFWYGLVVH 168 (440)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHHHHhcccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999997665445556677889999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHhccccccCCCCccccccccccccccccCCccc--chhhHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 020629 194 FRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLRSSNKVT--DQYDLWKALKTVFSKERVMFGLVSGAVFLSC 271 (323)
Q Consensus 194 lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~l~f~lvs~~tf~~L 271 (323)
+|+||++|++|+++++..+..+..++++.+.|..++ +...+..+.. ...+.+..+.++++++++.|+++++++|+++
T Consensus 169 fkiYPiIy~~Pi~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~l~s~~tf~~l 247 (440)
T PLN02841 169 FRIYPIIYALPIILVLDKQYFGPGGRPALTKWNSKQ-NKTPSSNTEATSFLFNLWTFLTSLFSRERIMFGLISGGVFFAL 247 (440)
T ss_pred hhhhHHHHHHHHHHHhccccccccccccchhhhccc-cccccccccccchhhhhhHHHHhccCHhhhhhHHHHHHHHHHH
Confidence 999999999999999965433333334344454322 1111111111 1123444556778999999999999999999
Q ss_pred HHHHHHHhcHHHHHHhheeeEEecCCCCCCchhHHHH
Q 020629 272 TGLFFYLYGWEFLHEALLYHLTHGGVCGIQQGSFIRK 308 (323)
Q Consensus 272 ~~~sy~iyG~~FL~etYlyhl~r~D~rPNi~~~~~~~ 308 (323)
+++||.+|||||++|||+||++|+|||||.++||+..
T Consensus 248 ~~~~y~~YG~~FL~eaylYHl~R~DhRHNFS~yfy~l 284 (440)
T PLN02841 248 TGVSFYLYGWEFLNEALLYHLTRTDPRHNFSIYFYHI 284 (440)
T ss_pred HHHHHHHHhHHHHHHHHHHhheecCCCccCcHHHHHH
Confidence 9999999999999999999999999999999999864
No 2
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-59 Score=442.95 Aligned_cols=249 Identities=38% Similarity=0.679 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccceeeecCCcchhHhHHHHHHhCCCCCCCCCCcccchhHHHHHhccchhhhhhHHH
Q 020629 33 IRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKF 112 (323)
Q Consensus 33 ~~~~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy~rl~DG~~l~~~G~sPY~~~tyhytPLLl~ll~p~~~~~p~~~kl 112 (323)
...++++|++.|++|.+||.+||.+..|+||||||+|++||++.+.+|.|||+|+||||||++++++.||...+|.+||+
T Consensus 21 ~~~~llva~l~Ri~Lv~Yg~~hD~~~~v~~TDIDY~VftDaar~Vs~G~sPf~R~TYRYtP~la~ll~pni~~~p~~GK~ 100 (405)
T KOG3893|consen 21 FFTHLLVAFLARIALVFYGQLHDRQSAVPYTDIDYKVFTDAARQVSAGDSPFARATYRYTPILAWLLTPNIYLFPAWGKL 100 (405)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcchhccCCccccceeEeehhhHHhhcCCChhhhhhhcccHHHHHHhccceecCchHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 020629 113 LFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVV 192 (323)
Q Consensus 113 lf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav 192 (323)
+|+.+|+++|++++|++.+++.+++.+...+..|++||+++++|+|||+|++..+++++.+|.+.|+.+..||+..|+|+
T Consensus 101 Lf~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~lyllqK~~v~~A~l~~GlaI 180 (405)
T KOG3893|consen 101 LFAIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILTLYLLQKSEVFLAGLAHGLAI 180 (405)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHHHHHHHHhHHHHHHHHhhhee
Confidence 99999999999999999877777777788899999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhccccccCCCCccccccccccccccccCCcccchhhHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 020629 193 HFRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLRSSNKVTDQYDLWKALKTVFSKERVMFGLVSGAVFLSCT 272 (323)
Q Consensus 193 ~lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~f~lvs~~tf~~L~ 272 (323)
|+|+||++|.+|+.+.+..+.++ .+...+..+.++. .+++...+.+.++|++.+
T Consensus 181 h~KIYPliY~l~i~l~ls~~~~~-----------------------s~~~~~l~sLL~~---~k~l~~~~~tLtsf~~~~ 234 (405)
T KOG3893|consen 181 HLKIYPLIYSLAIYLSLSTRKTQ-----------------------STPLDKLCSLLSI---NKQLCLILGTLTSFAACT 234 (405)
T ss_pred eeEechHHhhhhhheEEecCCCC-----------------------CcHHHHHHHHhcc---ccchhhhHHHHHHHHHHH
Confidence 99999999999999988654211 1111122333322 123667778899999999
Q ss_pred HHHHHHhcHHHHHHhheeeEEecCCCCCCchhHHH
Q 020629 273 GLFFYLYGWEFLHEALLYHLTHGGVCGIQQGSFIR 307 (323)
Q Consensus 273 ~~sy~iyG~~FL~etYlyhl~r~D~rPNi~~~~~~ 307 (323)
+.+|.+|||||+||+|+||++|+|||||.+++|+-
T Consensus 235 ~~fY~iYG~eFLd~~ylYH~~R~D~rHNFS~~f~l 269 (405)
T KOG3893|consen 235 WTFYYIYGWEFLDEAYLYHFVRRDHRHNFSLYFLL 269 (405)
T ss_pred HHHHHHHhHHHHHHHHHhheecccccccCCHHHHH
Confidence 99999999999999999999999999999999974
No 3
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=2.1e-42 Score=340.46 Aligned_cols=240 Identities=22% Similarity=0.287 Sum_probs=197.9
Q ss_pred HHHHHHHHHH-Hhcc---cccccceeeecCCcc-hhHhHHHHHHhCCCCCCCCCCcccchhHHHHHhcc------chhhh
Q 020629 39 LSAIFRVILI-VYGE---WQDSHMEVRYTDVDY-LVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPN------SIIHR 107 (323)
Q Consensus 39 ~g~~lRl~L~-~~~~---~~d~~~elsyTdidy-~rl~DG~~l~~~G~sPY~~~tyhytPLLl~ll~p~------~~~~p 107 (323)
+|+++|+++. .+++ +.++|+|+| ||+|+ ||++||.++.++|.|||+|+++||+|++++++.+. ....+
T Consensus 2 ~~~~~Rl~L~~~~~~l~~~l~~rvE~s-TP~tSfkrl~Eg~~L~~~g~spY~g~v~h~~PLlL~l~~~l~~~~~~~~~~~ 80 (382)
T PF06728_consen 2 AGVLLRLLLFSLFPSLPDWLSDRVELS-TPLTSFKRLQEGVYLYKHGISPYSGGVFHQPPLLLALFSFLLKSSPNSPNSP 80 (382)
T ss_pred HHHHHHHHHHHHhcchhhhhhCCeEec-CccchHHHHHHHHHHHHcCCCCcCCCCccCcCHHHHHHHHHHhcccccccch
Confidence 6889999996 3444 457999999 99998 99999999999999999999999999999998433 33456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCC-----------CccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHH
Q 020629 108 SWGKFLFSASDLLVGVFIHSILKLRKV-----------PEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICL 176 (323)
Q Consensus 108 ~~~kllf~l~Dll~a~ll~~i~~~~~~-----------~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~ 176 (323)
...+++|+++|+++|++++++.+..+. .+..+..++++|+|||++|++|+++|++++.|++++.+++++
T Consensus 81 ~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~~~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a 160 (382)
T PF06728_consen 81 ILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKSSSPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFA 160 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcccchHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 789999999999999999999753221 114578899999999999999999999999999999999999
Q ss_pred HhCChHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccCCCCccccccccccccccccCCcccchhhHHHHHHhhhhhh
Q 020629 177 LKGNVLQAAFWYGLVVHFRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLRSSNKVTDQYDLWKALKTVFSKE 256 (323)
Q Consensus 177 ~kg~~~laa~~lalav~lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 256 (323)
+|||...|++++|+++|+++||+++++|+++.+.+..+..+.+. +..+ .. ...
T Consensus 161 ~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~~~~~~~~~~-----------------~~~~-~~---------~~~ 213 (382)
T PF06728_consen 161 VKGNVFLSAISLALATYLSLYPILLLPPLLLLLYSSWKQSKSKN-----------------SSKS-SK---------WSS 213 (382)
T ss_pred HcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhhccccc-----------------cccc-cH---------HHH
Confidence 99999999999999999999999999999987764111000000 0000 00 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-HHHHHHhheeeEEecCCCCCCchhHH
Q 020629 257 RVMFGLVSGAVFLSCTGLFFYLYG-WEFLHEALLYHLTHGGVCGIQQGSFI 306 (323)
Q Consensus 257 ~l~f~lvs~~tf~~L~~~sy~iyG-~~FL~etYlyhl~r~D~rPNi~~~~~ 306 (323)
.++..+++.++++++..+||...| |+|+++||+.+++.+|++||+|=+.+
T Consensus 214 ~~~~~~~f~~~~~~L~~~S~~~~~sw~fl~~ty~~~l~~~dltPNlGl~WY 264 (382)
T PF06728_consen 214 FLQILLIFIASLAALLLLSYLITGSWNFLDSTYGFILTVPDLTPNLGLWWY 264 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHhhcccCCCCCcchHHH
Confidence 345777788999999999999888 99999999999999999999997543
No 4
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=100.00 E-value=6e-33 Score=266.81 Aligned_cols=230 Identities=24% Similarity=0.315 Sum_probs=181.7
Q ss_pred hhhHHHHHHHHHHHHHHHHH--hcccccccceeeecCCcc-hhHhHHHHHHhCCCCCCCCCCcccchhHHHHHhcc----
Q 020629 30 SINIRSLLWLSAIFRVILIV--YGEWQDSHMEVRYTDVDY-LVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPN---- 102 (323)
Q Consensus 30 ~~~~~~~l~~g~~lRl~L~~--~~~~~d~~~elsyTdidy-~rl~DG~~l~~~G~sPY~~~tyhytPLLl~ll~p~---- 102 (323)
..+...++.++.+.|..+.. .++..++|+|++ ||+++ ||++||.+++++|.|||+|+.+|++|+++.++.+-
T Consensus 14 ~~k~~~~l~i~~~v~~~lf~s~~a~~is~rvEvs-TPvsS~rRl~EGi~Ll~~gl~PY~G~vfH~sPLlL~ll~~~~~~l 92 (388)
T KOG2552|consen 14 ELKLALWLVISAAVRVRLFRSSLAEFISERVEVS-TPVSSFRRLQEGIALLDNGLSPYSGGVFHESPLLLSLLRGYYLEL 92 (388)
T ss_pred chhHHHHHHHHHHHHHHHHhhhhhHHhhcCceec-CcchHHHHHhhhHHHHhcCCCcccCccccCCcchhhhhchHHHHH
Confidence 33445667777777777766 566788999999 99998 99999999999999999999999999999988411
Q ss_pred ---chhhhhhHHHHHHHHHHHHHHHHHHHHhhcCC-----------C---ccchhhhHHhhhcchhhhhhccCCCchhHH
Q 020629 103 ---SIIHRSWGKFLFSASDLLVGVFIHSILKLRKV-----------P---EDLCMYSAVVWLFNPFTFTIGTRGNCEPIV 165 (323)
Q Consensus 103 ---~~~~p~~~kllf~l~Dll~a~ll~~i~~~~~~-----------~---~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~ 165 (323)
..-.+..+...|+..|+..+++..++.|.++. + ...+..++.+|++||+||.+|++.|++++.
T Consensus 93 ~~~i~~a~t~~~lyf~i~dl~~~~l~kq~~k~~~~ya~d~~~l~~~p~~~~~i~~~v~l~Yl~NPlTilSCi~~St~~I~ 172 (388)
T KOG2552|consen 93 LFMITDARTAILLYFAIADLLKYLLLKQIQKEQKAYALDVRELQFLPMEILPIGDLVALLYLFNPLTILSCIGLSTTVIE 172 (388)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHhhcCcccccHHHHHHHHHHhCceeeeeeccccchHHH
Confidence 11124567888999999999999887432221 1 112457889999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccCCCCccccccccccccccccCCcccchhhH
Q 020629 166 CAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLRSSNKVTDQYDL 245 (323)
Q Consensus 166 ~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
|++++.++|++++|+..++++++|+++|+++||+.+..|+++.+++... +|
T Consensus 173 N~~v~~~ly~av~~~~~l~a~~la~~t~~s~yp~~L~~P~l~~L~~~~~----~~------------------------- 223 (388)
T KOG2552|consen 173 NFAVAVSLYGAVTGRVPLAAFGLAIATHLSLYPATLTIPLLFLLGYGLD----AP------------------------- 223 (388)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHhcccchHHHHHHHHHHHhcccc----Cc-------------------------
Confidence 9999999999999999999999999999999999999999999965421 11
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhc-HHHHHHhheeeEEecCCCCCCchh
Q 020629 246 WKALKTVFSKERVMFGLVSGAVFLSCTGLFFYLYG-WEFLHEALLYHLTHGGVCGIQQGS 304 (323)
Q Consensus 246 ~~~l~~~~~~~~l~f~lvs~~tf~~L~~~sy~iyG-~~FL~etYlyhl~r~D~rPNi~~~ 304 (323)
. +.+ +.+++.....+|.+-+ |+|+..||+++++.+|..||+|=-
T Consensus 224 -----~------~~~----i~s~li~~~~~~~l~~~~~f~~~~ygfilsi~dl~Pniglf 268 (388)
T KOG2552|consen 224 -----H------LPF----IFSVLIWSLYVLFLLSSWEFFKRTYGFILSIEDLSPNIGLF 268 (388)
T ss_pred -----c------cch----hHHHHHHHHHHHHHHHHHHHHhhhccceeeHHhhCCCccHH
Confidence 0 001 2223333333444444 999999999999999999999953
No 5
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=99.97 E-value=6.4e-31 Score=246.04 Aligned_cols=125 Identities=44% Similarity=0.740 Sum_probs=112.6
Q ss_pred hccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccCCCCccccccccccccccc
Q 020629 155 IGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLR 234 (323)
Q Consensus 155 ~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
+|||||+|++.++++++++|++.|||...||+++|+|+|+|+||+||.+|+++++.++.++
T Consensus 1 ISTRGnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~------------------- 61 (259)
T PF05007_consen 1 ISTRGNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNG------------------- 61 (259)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccc-------------------
Confidence 5899999999999999999999999999999999999999999999999999999654210
Q ss_pred cCCcccchhhHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhheeeEEecCCCCCCchhHHH
Q 020629 235 SSNKVTDQYDLWKALKTVFSKERVMFGLVSGAVFLSCTGLFFYLYGWEFLHEALLYHLTHGGVCGIQQGSFIR 307 (323)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~l~f~lvs~~tf~~L~~~sy~iyG~~FL~etYlyhl~r~D~rPNi~~~~~~ 307 (323)
+..+.+++++++++++|++++++++++++.++|.+||+||++|||+||++|+|||||.++||+-
T Consensus 62 ---------~~~~~~~~~~~~~~~~f~~~s~~tf~~l~~~~Y~~YG~~FL~eaylYHl~R~DhRHNFS~yfy~ 125 (259)
T PF05007_consen 62 ---------SFRSRLKRLLNPNRLKFGLISAITFAALTLLMYYIYGWEFLYEAYLYHLTRKDHRHNFSPYFYL 125 (259)
T ss_pred ---------hHHHHHHHhcCHhHhhhHHHHHHHHHHHHHHHHHHHChHHHHHHHhhheEeecCCccCcHHHHH
Confidence 1222334667888999999999999999999999999999999999999999999999999984
No 6
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=99.06 E-value=8.5e-09 Score=104.13 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=112.9
Q ss_pred ccceeeecCCcchhHhHHHHHHhCCCCCCCCCC-------------------cccchhHHHHH------hccc-hhhhhh
Q 020629 56 SHMEVRYTDVDYLVFSDAASLMASGDSPYKRTT-------------------YRYSPLLAFFL------IPNS-IIHRSW 109 (323)
Q Consensus 56 ~~~elsyTdidy~rl~DG~~l~~~G~sPY~~~t-------------------yhytPLLl~ll------~p~~-~~~p~~ 109 (323)
.-|..| .|+ |.=+.+| +++.+|.|||+.+. --|.|+-+++. ..+. ...-..
T Consensus 92 a~PlfS-rDv-YsYlaqG-~l~~~G~dPY~~gP~~~~~~~~~~v~~~W~~t~aPYGPl~l~i~~~v~~l~g~~i~~~v~~ 168 (470)
T TIGR03459 92 AVPMMS-RDV-YSYLMQG-ALLRDGFDPYTVGAAANPGPLLDEVSPDWRNTTTPYGPLHLLVGQAITTVTGDNVTAGTLA 168 (470)
T ss_pred cCCccc-HHH-HHHHHHH-HHHHcCCCccccCCccCCchHhhhcCchhccCCCCCChHHHHHHHHHHHHhCCCcHHHHHH
Confidence 345667 442 3448999 89999999999533 25667766553 1111 111245
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccC-CCchhHHHHHHHHHHHHHHhCChHHHHHHH
Q 020629 110 GKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTR-GNCEPIVCAMILWIIICLLKGNVLQAAFWY 188 (323)
Q Consensus 110 ~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~-gs~e~~~~~lvl~~Ly~~~kg~~~laa~~l 188 (323)
.|++-.+.+++++|.+.|++|..+.++ .....++.+||++|+.-++ ...|+++..+++..++.+.+++...+++++
T Consensus 169 ~Rl~~l~g~~l~~w~~~rLar~~g~~~---~~AlWL~~~NPLviihlvgg~HnealM~gl~l~gl~~~~r~~~~~g~vli 245 (470)
T TIGR03459 169 FKLLSLPGLAVMVWAVPKLATHLGGNP---TVALWLGVLNPLVVIHLIGGMHNEMLMVGLVSAGILLALKRRPVAGIALI 245 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCH---HHHHHHHHcCchhhhhhhcchhHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 688889999999999999998766432 2333347899999998884 459999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHh
Q 020629 189 GLVVHFRIYPIIYVLPIILIL 209 (323)
Q Consensus 189 alav~lklYPiil~~pl~l~l 209 (323)
++|+..|.-+++.+|.+....
T Consensus 246 ~~a~~VK~~a~l~Lpf~~~~~ 266 (470)
T TIGR03459 246 AVAVALKATAGIALPFVVWIW 266 (470)
T ss_pred HHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999997766554
No 7
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.72 E-value=8.1e-07 Score=80.35 Aligned_cols=118 Identities=19% Similarity=0.383 Sum_probs=85.2
Q ss_pred cccchhHHHHHhccchhhhhhHHHHHHHHHHHHHHHHHHHH-hhcCCCc--cchhhh-HHhhhcchhhhhhccCCCchhH
Q 020629 89 YRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSIL-KLRKVPE--DLCMYS-AVVWLFNPFTFTIGTRGNCEPI 164 (323)
Q Consensus 89 yhytPLLl~ll~p~~~~~p~~~kllf~l~Dll~a~ll~~i~-~~~~~~~--~~~~~~-~~lyLfNPl~I~~s~~gs~e~~ 164 (323)
|.|||..++++.|.....+.....++.+..+++........ +..+..+ ...... ..+..++|. ...-..|+.|.+
T Consensus 1 ~~YpP~~~~l~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~gq~~~l 79 (241)
T PF09594_consen 1 YVYPPLFALLFAPLALLPFPVAFLLWALLSLAALALAVRLLLRRLGRRKPPGRALLLALLLLAFPPV-LSALGLGQFDLL 79 (241)
T ss_pred CcCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHH-HHHHHhccHHHH
Confidence 68999999999887655555667777766666655554443 3222211 111222 234556776 444445999999
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 020629 165 VCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPIIL 207 (323)
Q Consensus 165 ~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl~l 207 (323)
..++++.+++...|+|...|++++|+++..|++|+++++.++.
T Consensus 80 ~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~ 122 (241)
T PF09594_consen 80 VAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI 122 (241)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999984443
No 8
>PRK13375 pimE mannosyltransferase; Provisional
Probab=98.70 E-value=2.1e-06 Score=85.97 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHhcccccccceeeecCCcchhHhHHHHHHhCCCCCCCCC----------CcccchhHHHHHhccch
Q 020629 35 SLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRT----------TYRYSPLLAFFLIPNSI 104 (323)
Q Consensus 35 ~~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy~rl~DG~~l~~~G~sPY~~~----------tyhytPLLl~ll~p~~~ 104 (323)
.++.++++.|++-....+ .=. ..+|.++.++|.+-+.+|.|-||.+ .|.|||.-+.++.|...
T Consensus 22 ~~~~~~~~~~~~~~~~~~------~~~-~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpFtYPPfaallf~PLal 94 (409)
T PRK13375 22 LLLVLSVAARLAWTYLAP------NGA-NFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPFTYPPFAALVFYPLHL 94 (409)
T ss_pred HHHHHHHHHHHHHhcccC------CCC-CCccHHHHHHhHHHHccCCcccCccccccCCCCCCCCCCCcHHHHHHHHHHh
Confidence 377788889996433211 011 3467889999999999999999853 48999999999998876
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhh-cCCCccchhhhHHhh-----hcchhhhhhccCCCchhHHHHHHHHHHHHHHh
Q 020629 105 IHRSWGKFLFSASDLLVGVFIHSILKL-RKVPEDLCMYSAVVW-----LFNPFTFTIGTRGNCEPIVCAMILWIIICLLK 178 (323)
Q Consensus 105 ~~p~~~kllf~l~Dll~a~ll~~i~~~-~~~~~~~~~~~~~ly-----LfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~k 178 (323)
........+|.++-+...+...++..+ .+... .+......| .+-|.--... -|+-..+..++++ ..+.+
T Consensus 95 Lp~~~a~~l~~~~~~~al~~~v~~~~r~l~~~~-~~~~~a~~~~~~~l~~ePv~~tl~-~GQIN~lL~~Lv~---~dll~ 169 (409)
T PRK13375 95 LPFGVVAFLWQLATIAALYGVVRISQRLLGGGA-GGHRVAMLWTAVGIWLEPVRSTFD-YGQINVFLMLAVL---YAVYS 169 (409)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cchhHHHHHHHHHHHhHHHHHHHH-hCcHHHHHHHHHH---HHHhc
Confidence 544566778887776666555444321 11111 011111111 1344432211 1433333333333 33457
Q ss_pred CChHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccCCCCccccccccccccccccCCcccchhhHHHHHHhhhhhhhH
Q 020629 179 GNVLQAAFWYGLVVHFRIYPIIYVLPIILILDPLFFRSGLKPRLQNWSSRQDKTLRSSNKVTDQYDLWKALKTVFSKERV 258 (323)
Q Consensus 179 g~~~laa~~lalav~lklYPiil~~pl~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 258 (323)
+|...+|+++|+++-+|+.|.++. +++.+.++ |
T Consensus 170 ~r~~~aGvliGLAaaIKlTPavf~--l~lL~~Rr------------W--------------------------------- 202 (409)
T PRK13375 170 SRWWLSGLLVGLAAGVKLTPAITG--LYFLGARR------------W--------------------------------- 202 (409)
T ss_pred CCccHHHHHHHHHHHhhhhhHHHH--HHHHHhCH------------H---------------------------------
Confidence 777889999999999999999954 33333221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc---HHHHHHhhee
Q 020629 259 MFGLVSGAVFLSCTGLFFYLYG---WEFLHEALLY 290 (323)
Q Consensus 259 ~f~lvs~~tf~~L~~~sy~iyG---~~FL~etYly 290 (323)
+-...++.++++.+.+++.+-| |+|..++...
T Consensus 203 ra~~~A~~t~~~~~~lg~~~~p~~s~~ywt~~l~~ 237 (409)
T PRK13375 203 AAAAFSAVVFLATVGVSYLVVGDQARYYFTDLLGD 237 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccHHHHHHHHhcc
Confidence 2234566778888888888876 8898887544
No 9
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=97.98 E-value=1.6e-05 Score=81.18 Aligned_cols=111 Identities=15% Similarity=0.232 Sum_probs=87.6
Q ss_pred HHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccCCCCccc
Q 020629 143 AVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPIILILDPLFFRSGLKPRL 222 (323)
Q Consensus 143 ~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl~l~l~~~~~~~~~~~~~ 222 (323)
+++=.-+| .+.-+..++.|.+..+++++++.+ ++|...||+++|+++..|.+|.|+++|++.++.+++..
T Consensus 201 valv~as~-~v~f~v~~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K~~P~Ivl~pll~~~~keyg~------- 270 (536)
T COG5650 201 VALVAASP-LVGFAVFTVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFKQIPLIVLPPLLYLIYKEYGL------- 270 (536)
T ss_pred eeeeeccc-eEEEEEecchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhhcCchhhHHHHHHHHHHhcCc-------
Confidence 33345788 444577899999999999999887 99999999999999999999999999999988654320
Q ss_pred cccccccccccccCCcccchhhHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhheeeEEec
Q 020629 223 QNWSSRQDKTLRSSNKVTDQYDLWKALKTVFSKERVMFGLVSGAVFLSCTGLFFYLYGWEFLHEALLYHLTHG 295 (323)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~f~lvs~~tf~~L~~~sy~iyG~~FL~etYlyhl~r~ 295 (323)
+...+|...+++|++..+.=+-...+++|.+...+.|..+.
T Consensus 271 --------------------------------~~a~~f~~~aa~t~lLvN~PfiI~~P~aw~~sil~~~~r~~ 311 (536)
T COG5650 271 --------------------------------RPAIKFIATAAITWLLVNLPFIILGPRAWVESILLFARRGL 311 (536)
T ss_pred --------------------------------chHHHHHHHHHHHHHHHcCceEEechHHHHHHHHhHHhcCC
Confidence 11246778888888888766644444999999999998443
No 10
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=97.71 E-value=0.00037 Score=69.59 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=86.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhcc-CCCchhHHHHHHHHHHHHHHhCChHHHHH
Q 020629 108 SWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGT-RGNCEPIVCAMILWIIICLLKGNVLQAAF 186 (323)
Q Consensus 108 ~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~-~gs~e~~~~~lvl~~Ly~~~kg~~~laa~ 186 (323)
..+++.=..+|..+++.++++.|.+=...+.+.....+|-++|.+|..++ .|.||++-.++..+++|+..+++...|++
T Consensus 117 l~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~ 196 (420)
T COG5542 117 LAIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALF 196 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHH
Confidence 34666668999999999999997543332345556667889999999998 58899999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhc
Q 020629 187 WYGLVVHFRIYPIIYVLPIILILD 210 (323)
Q Consensus 187 ~lalav~lklYPiil~~pl~l~l~ 210 (323)
++|+|+..|.--+++.|-+...+-
T Consensus 197 ~faLa~l~Rsngi~~~p~fl~~~i 220 (420)
T COG5542 197 FFALATLFRSNGIFLSPLFLIPLI 220 (420)
T ss_pred HHHHHHHhccchhHHHHHHHHHHH
Confidence 999999999999888877766553
No 11
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=97.46 E-value=0.0024 Score=58.96 Aligned_cols=161 Identities=18% Similarity=0.230 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHhcccccccceeeecCCcc-hhHhHHHHHHhCCCCCCCCC-------CcccchhHHHHHhc-cch--
Q 020629 36 LLWLSAIFRVILIVYGEWQDSHMEVRYTDVDY-LVFSDAASLMASGDSPYKRT-------TYRYSPLLAFFLIP-NSI-- 104 (323)
Q Consensus 36 ~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy-~rl~DG~~l~~~G~sPY~~~-------tyhytPLLl~ll~p-~~~-- 104 (323)
+..+++++|+..+..+... -..|.-+.. + .+.-|+.+..... .|+... ...|+|..-+.... ...
T Consensus 3 ~~~~~~~~~~~~l~~p~~~-v~de~~~~~--~~~~Y~~~~~~~~~~-p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 78 (245)
T PF02366_consen 3 LTLLSLLLRFWLLSLPNDG-VFDEVHFDE--FANRYAEHTRFMDEH-PPLGKLLFALGAYLFGYPPLYYWISAIGFYYFG 78 (245)
T ss_pred HHHHHHHHHHHHHhcchhh-hhccccccH--HHHHHHhcceeeccC-CcccchhhhhhhHHhcccchhhHHHhhhhhhhh
Confidence 4567888999998864310 011222111 1 2333443333222 333321 23566666555421 110
Q ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhC----
Q 020629 105 -IHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKG---- 179 (323)
Q Consensus 105 -~~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg---- 179 (323)
.+....+.+=.++-.++..+++.+.++...++..+...+++++++|..+..+.....|+...++++++++++.+.
T Consensus 79 ~~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~~~~~~ 158 (245)
T PF02366_consen 79 SVNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLRWYRYQ 158 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 112345666677788888888888776665566677788889999999999988999999999999999987755
Q ss_pred --------ChHHHHHHHHHHHHHhhhHHHH
Q 020629 180 --------NVLQAAFWYGLVVHFRIYPIIY 201 (323)
Q Consensus 180 --------~~~laa~~lalav~lklYPiil 201 (323)
..+++++++|+|+..| +|..+
T Consensus 159 ~~~~~~~~~~~l~gi~lGla~~~K-~~~~~ 187 (245)
T PF02366_consen 159 PFRRKWWLWLLLAGIALGLAILTK-GPGLL 187 (245)
T ss_pred ccccccHHHHHHHHHHHHHHHHhc-hhHHH
Confidence 2468899999999999 55443
No 12
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=97.44 E-value=0.011 Score=58.67 Aligned_cols=143 Identities=15% Similarity=0.271 Sum_probs=97.5
Q ss_pred eeeecCCcchhHhHHHHHHhCCCCCCC---CC--CcccchhHHHHHhccc-----hhhhhhHHHHHHHHHHHHHHHHHHH
Q 020629 59 EVRYTDVDYLVFSDAASLMASGDSPYK---RT--TYRYSPLLAFFLIPNS-----IIHRSWGKFLFSASDLLVGVFIHSI 128 (323)
Q Consensus 59 elsyTdidy~rl~DG~~l~~~G~sPY~---~~--tyhytPLLl~ll~p~~-----~~~p~~~kllf~l~Dll~a~ll~~i 128 (323)
.|+||.||++-..|-+....+|.=-|. || .-.||---.++..-.+ ...-..++.+|...-+++..+..++
T Consensus 19 ~VpYTEIDw~aYMqqv~~~~~Ge~DYs~i~GdTGPlVYPAGfVyiY~~Ly~lT~~G~~I~~aQ~iF~~lyl~t~~~v~~~ 98 (368)
T PF05208_consen 19 KVPYTEIDWKAYMQQVEGFLNGERDYSKIKGDTGPLVYPAGFVYIYSFLYYLTDGGENIRLAQYIFAGLYLATLALVFRI 98 (368)
T ss_pred eccCccccHHHHHHHHHHHHcCcccHHHhcCCCCCccccchHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999887777888999976666 33 3455544444442111 1112457889998888888777777
Q ss_pred H-hhcCCCccc------hhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHH
Q 020629 129 L-KLRKVPEDL------CMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIY 201 (323)
Q Consensus 129 ~-~~~~~~~~~------~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil 201 (323)
. +..+.+... ....-++|. .|.=-|++..+++-.+++.+.++|+.++++++++|+..|+--+++
T Consensus 99 Y~~~~~~Pp~~~~ll~lSkRlHSI~v---------LRlFND~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~ 169 (368)
T PF05208_consen 99 YSRSRKLPPWLLILLCLSKRLHSIFV---------LRLFNDCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLF 169 (368)
T ss_pred HHhccCCCchHHHHHHHHHHHHHhhh---------hheecHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 333322110 000011111 123368889999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 020629 202 VLPIILILD 210 (323)
Q Consensus 202 ~~pl~l~l~ 210 (323)
+|.++..+-
T Consensus 170 ~Pall~~~l 178 (368)
T PF05208_consen 170 APALLVLLL 178 (368)
T ss_pred hHHHHHHHH
Confidence 999977664
No 13
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=97.25 E-value=0.023 Score=57.60 Aligned_cols=146 Identities=17% Similarity=0.213 Sum_probs=99.8
Q ss_pred cCCcchhHhHHHHHHhCCCCCCCCC------CcccchhHHHHHhccchhhhhhHHHHHH---HHHHHHHHHHHHHHhhcC
Q 020629 63 TDVDYLVFSDAASLMASGDSPYKRT------TYRYSPLLAFFLIPNSIIHRSWGKFLFS---ASDLLVGVFIHSILKLRK 133 (323)
Q Consensus 63 Tdidy~rl~DG~~l~~~G~sPY~~~------tyhytPLLl~ll~p~~~~~p~~~kllf~---l~Dll~a~ll~~i~~~~~ 133 (323)
+..|.--+.++++...+|.-|++.- ..|.+|++..+. |....+|.. ..+.+ ++=.+.++.+++++++..
T Consensus 8 ~~~DlGif~Q~~~~~~~g~~~~~t~~~~~~lg~HfsPil~ll~-Ply~l~Ps~-~tLli~Qal~la~~~~pl~~lar~~~ 85 (449)
T PF09852_consen 8 PSFDLGIFDQAIWSYAHGRAPISTIEGQNHLGDHFSPILYLLA-PLYRLFPSP-LTLLIVQALLLALGAIPLYRLARRRL 85 (449)
T ss_pred CchhHHHHHHHHHHHhCCCCceecccccccccccchHHHHHHH-HHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4567767888999999999776632 359999887554 444443322 12222 222345567788888776
Q ss_pred CCccchhhhHHhhhcchhhhhhccC-CCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHh--hhHHHHHHHHHHHhc
Q 020629 134 VPEDLCMYSAVVWLFNPFTFTIGTR-GNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR--IYPIIYVLPIILILD 210 (323)
Q Consensus 134 ~~~~~~~~~~~lyLfNPl~I~~s~~-gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lk--lYPiil~~pl~l~l~ 210 (323)
.++..+...++.|++||.+...... -..+++..-+++++++++.++|+..+.++.++..-.| ....+...-+++.++
T Consensus 86 ~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~v~~~gl~~~~~ 165 (449)
T PF09852_consen 86 LSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLTVAGIGLYLLLR 165 (449)
T ss_pred CCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 5666778889999999999965442 2366666668888888888999888888888888888 544444444444443
No 14
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.22 E-value=0.0055 Score=51.46 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=88.0
Q ss_pred cchhHHHHHhccch---hhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHH
Q 020629 91 YSPLLAFFLIPNSI---IHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCA 167 (323)
Q Consensus 91 ytPLLl~ll~p~~~---~~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~ 167 (323)
+||+..+++..... .+....++.-.++-.++.+.++++.|+..+ ++.+...+.++.+.|..+..+...+.|....+
T Consensus 2 ~pPl~~~~~~~~~~l~G~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~~~~~~~~~~~ 80 (159)
T PF13231_consen 2 HPPLYFLLLALFFKLFGDSVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSASARPDMLLLF 80 (159)
T ss_pred CChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHHHHhHHHHHHH
Confidence 67777666522111 123456777788888999999999887643 45567778889999999888887888999999
Q ss_pred HHHHHHHHHHh----CC---hHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 020629 168 MILWIIICLLK----GN---VLQAAFWYGLVVHFRIYPIIYVLPIILIL 209 (323)
Q Consensus 168 lvl~~Ly~~~k----g~---~~laa~~lalav~lklYPiil~~pl~l~l 209 (323)
+.++++|...+ ++ ...++++.|++...|..=+++.+++..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l 129 (159)
T PF13231_consen 81 FFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYL 129 (159)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988763 22 46789999999999977777776666544
No 15
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.93 E-value=0.023 Score=57.74 Aligned_cols=89 Identities=15% Similarity=0.197 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhh
Q 020629 117 SDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRI 196 (323)
Q Consensus 117 ~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lkl 196 (323)
+=++++..++++.+....+++.+...++++.+||-.|.-+ +.=+|++..++...++|...+++...|+++.|+|+..+-
T Consensus 122 ~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~PasiF~s-a~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~Rs 200 (443)
T PF04188_consen 122 AFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASIFLS-APYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRS 200 (443)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHHHhh-cCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 3445556677776544334445567788999999998654 488999999999999999999999999999999998876
Q ss_pred hHHHHHHHHH
Q 020629 197 YPIIYVLPII 206 (323)
Q Consensus 197 YPiil~~pl~ 206 (323)
--++.+.++.
T Consensus 201 nGll~~~~~~ 210 (443)
T PF04188_consen 201 NGLLLAGFFA 210 (443)
T ss_pred hHHHHHHHHH
Confidence 5555555543
No 16
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=95.85 E-value=0.24 Score=50.87 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=76.3
Q ss_pred CCcccchhHHHHHhccch--h-hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchh
Q 020629 87 TTYRYSPLLAFFLIPNSI--I-HRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEP 163 (323)
Q Consensus 87 ~tyhytPLLl~ll~p~~~--~-~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~ 163 (323)
..+..||+..++...... . +....++.-.++=.++..+.+.+.|..... ..+...+++++++|.++..+...+.|+
T Consensus 60 ~~~~kPPl~~Wl~a~~~~lfG~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~~~~~~D~ 138 (535)
T COG1807 60 PYFEKPPLVYWLQALSYLLFGVNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIGRLALLDA 138 (535)
T ss_pred cccCCCcHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhHHHhhhH
Confidence 345666776666532111 0 112233333344445666666666543322 346778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCC--------hHHHHHHHHHHHHHhhhHHHHHH
Q 020629 164 IVCAMILWIIICLLKGN--------VLQAAFWYGLVVHFRIYPIIYVL 203 (323)
Q Consensus 164 ~~~~lvl~~Ly~~~kg~--------~~laa~~lalav~lklYPiil~~ 203 (323)
...+++.+++++..+.+ ..+.++.+|++...|---+++++
T Consensus 139 ~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~ 186 (535)
T COG1807 139 ALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLP 186 (535)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHH
Confidence 99999998888765321 25778999999999966555555
No 17
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=95.74 E-value=0.23 Score=49.32 Aligned_cols=149 Identities=17% Similarity=0.280 Sum_probs=92.5
Q ss_pred eeeecCCcchhHhHHHHHHhCCCCCCC---CCC--cccchhHHHHHhccch-----hhhhhHHHHHHHHHHHHHHHHHHH
Q 020629 59 EVRYTDVDYLVFSDAASLMASGDSPYK---RTT--YRYSPLLAFFLIPNSI-----IHRSWGKFLFSASDLLVGVFIHSI 128 (323)
Q Consensus 59 elsyTdidy~rl~DG~~l~~~G~sPY~---~~t--yhytPLLl~ll~p~~~-----~~p~~~kllf~l~Dll~a~ll~~i 128 (323)
.|.||.||++-..|-..-..+|.--|. ||| -.||---++++.-.++ .+--.++.+|...=+++..+..++
T Consensus 47 kV~YTEIDw~AYM~qve~fl~G~~dY~ql~GdTGPLVYPAGhv~iy~~ly~lTs~g~nv~~aQ~iF~~lYl~tLalv~~i 126 (429)
T KOG2762|consen 47 KVPYTEIDWKAYMEQVEGFLNGELDYSQLVGDTGPLVYPAGHVYIYSLLYYLTSGGTNVRRAQYIFAGLYLLTLALVLRI 126 (429)
T ss_pred ecCcceecHHHHHHHHHHHHhcccchhhhcCCCCCccccchHHHHHHHHHHHHcCCCeeehHHHHHHHHHHHHHHHHHHH
Confidence 478999999887777777888987776 433 4454333333311111 011246777777777766666666
Q ss_pred H-hhcCCCccchhhhHHhhhcchhhhhhc--cCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHH
Q 020629 129 L-KLRKVPEDLCMYSAVVWLFNPFTFTIG--TRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPI 205 (323)
Q Consensus 129 ~-~~~~~~~~~~~~~~~lyLfNPl~I~~s--~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl 205 (323)
. |..+. |..+..+=.+. .=|-+- .|-=-|++..++.-.++...+++|+..+++++++|+..|+--++|.|.+
T Consensus 127 y~kt~~v----Pp~vlvL~~ls-kRiHSIfVLRLFND~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPal 201 (429)
T KOG2762|consen 127 YHKTVRV----PPWVLVLLCLS-KRIHSIFVLRLFNDPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPAL 201 (429)
T ss_pred HHHhccC----ChHHHHHHHHH-HHHHHhhhhHHhcchHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHH
Confidence 5 22222 21111100000 111000 1222577777888888888889999999999999999999999999999
Q ss_pred HHHhccc
Q 020629 206 ILILDPL 212 (323)
Q Consensus 206 ~l~l~~~ 212 (323)
++.+..+
T Consensus 202 l~~lL~~ 208 (429)
T KOG2762|consen 202 LLLLLQN 208 (429)
T ss_pred HHHHHHh
Confidence 8877543
No 18
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=95.08 E-value=0.99 Score=45.98 Aligned_cols=148 Identities=14% Similarity=0.163 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHhcccccccceeeecCCcchhHhH-HHHHHhCCCCCCCCCCcccchhHHHHHhccch---hhhhhH
Q 020629 35 SLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSD-AASLMASGDSPYKRTTYRYSPLLAFFLIPNSI---IHRSWG 110 (323)
Q Consensus 35 ~~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy~rl~D-G~~l~~~G~sPY~~~tyhytPLLl~ll~p~~~---~~p~~~ 110 (323)
.+.++++++|+.-+-. ++ +. -|=-+..+ +-+++++|.--| ++..++|++.++...... .+....
T Consensus 6 ~i~l~al~lRl~~Lg~------~~-~~---~DEa~ya~~a~~ml~~g~~~~--~p~~h~Pll~wl~A~~~~lFG~se~a~ 73 (439)
T TIGR03663 6 LIVLFALLLRLFELGL------RV-FH---HDEAIHASFILKLLETGVYSY--DPAYHGPFLYHITAAVFHLFGISDATA 73 (439)
T ss_pred HHHHHHHHHHHHhcCC------CC-CC---CCchhHHHHHHHHHhcCCCCc--CCCCCCCHHHHHHHHHHHHhCCCHHHH
Confidence 4666777888877432 11 21 23222333 335556664434 333457877665411110 011222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhC-------ChHH
Q 020629 111 KFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKG-------NVLQ 183 (323)
Q Consensus 111 kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg-------~~~l 183 (323)
++.=+++-+++ .+++.+.++.- .++.....+++-.++|..+..+--...|+...++.+++++++.+. ....
T Consensus 74 RL~~aL~g~~v-~l~~~~~r~~~-~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~l 151 (439)
T TIGR03663 74 RLLPAVFGVLL-PLTAWLYRKRL-GDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFL 151 (439)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHc-CcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 33222222221 12222222221 222345556666799999887877889999999999999887642 2368
Q ss_pred HHHHHHHHHHHhh
Q 020629 184 AAFWYGLVVHFRI 196 (323)
Q Consensus 184 aa~~lalav~lkl 196 (323)
+++++|+++..|-
T Consensus 152 ag~~~gLa~ltKg 164 (439)
T TIGR03663 152 AASALALAFTSKE 164 (439)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999994
No 19
>COG3463 Predicted membrane protein [Function unknown]
Probab=94.38 E-value=1.3 Score=45.07 Aligned_cols=149 Identities=14% Similarity=0.155 Sum_probs=96.6
Q ss_pred ceeeecCCcchhHhHHHHHHhCCCCCCCC-------CCcccchhHHHHHhccchhhh-----hhHHHHHHHHHHHHHHHH
Q 020629 58 MEVRYTDVDYLVFSDAASLMASGDSPYKR-------TTYRYSPLLAFFLIPNSIIHR-----SWGKFLFSASDLLVGVFI 125 (323)
Q Consensus 58 ~elsyTdidy~rl~DG~~l~~~G~sPY~~-------~tyhytPLLl~ll~p~~~~~p-----~~~kllf~l~Dll~a~ll 125 (323)
..+.+|..|=-.+....+...+|.==|++ --.|..|.+..+. |-....| ...+.+++.. .++.+
T Consensus 30 ~sf~~ta~DLGI~sq~l~~~~~Gk~~Y~t~~~~~~~f~vhfqpilfLly-P~Y~l~Psp~~Lll~Q~i~ial---s~~p~ 105 (458)
T COG3463 30 WSFNSTALDLGIFSQSLYTTSHGKLFYNTVEFQLTHFGVHFQPILFLLY-PFYKLFPSPETLLLIQAIAIAL---SSLPI 105 (458)
T ss_pred hhhcceeechHHHHHHHHHHhCCeeeccchhhhcccceeehhhHHHHHH-HHHHhCCcHHHHHHHHHHHHHH---hHHHH
Confidence 44555676654455566666777644443 2357778775543 4322222 2233333333 34555
Q ss_pred HHHHhhcCCCccchhhhHHhhhcchhhhhhcc-CCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHH
Q 020629 126 HSILKLRKVPEDLCMYSAVVWLFNPFTFTIGT-RGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLP 204 (323)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~-~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~p 204 (323)
+.++++....+..+...+.+|++||.+.-+.. --..+++...+++++.|++.+|++.+..+++.+..-.|=--.+.++.
T Consensus 106 y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~lvlIl~tk~~a~liiIs 185 (458)
T COG3463 106 YLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFLVLILLTKEDAFLIIIS 185 (458)
T ss_pred HHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcccHHHHHH
Confidence 56666554446667788999999999986655 35689999999999999999999999988888877777554444555
Q ss_pred HHHHhc
Q 020629 205 IILILD 210 (323)
Q Consensus 205 l~l~l~ 210 (323)
+....+
T Consensus 186 l~i~~~ 191 (458)
T COG3463 186 LLIWLR 191 (458)
T ss_pred HHHHHH
Confidence 544443
No 20
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=94.26 E-value=0.76 Score=48.24 Aligned_cols=139 Identities=14% Similarity=0.099 Sum_probs=82.2
Q ss_pred cchhHhHHHHH-HhCC--CCCCCC-CC-cccchhHHHHHhccc--h-hhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 020629 66 DYLVFSDAASL-MASG--DSPYKR-TT-YRYSPLLAFFLIPNS--I-IHRSWGKFLFSASDLLVGVFIHSILKLRKVPED 137 (323)
Q Consensus 66 dy~rl~DG~~l-~~~G--~sPY~~-~t-yhytPLLl~ll~p~~--~-~~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~ 137 (323)
|=-|..|-++- +++| ..|+-. .. ++.||+..++..... . .+....++.-+++=++++++++.+.++...++.
T Consensus 32 DE~ryA~iareMl~sGdWlvP~~~g~~y~eKPPL~yWl~Als~~LFG~~~~a~RLpsaL~~~lt~llvy~larrl~~~r~ 111 (552)
T PRK13279 32 DETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSIGQWLFGDNNFGVRFGSVFSTLLSALLVYWLALRLWRDRR 111 (552)
T ss_pred chHHHHHHHHHHHHhCCcCccccCCCcCCCCCcHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH
Confidence 44444555554 4444 356543 33 456677655531110 0 012234555556666677777777765433344
Q ss_pred chhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHH---HHHHhC-----C---hHHHHHHHHHHHHHhhhHHHHHHHH
Q 020629 138 LCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWII---ICLLKG-----N---VLQAAFWYGLVVHFRIYPIIYVLPI 205 (323)
Q Consensus 138 ~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~L---y~~~kg-----~---~~laa~~lalav~lklYPiil~~pl 205 (323)
.+...+++++.+|.+...+.-...|....+++.+++ |.+.+. + ++..+++.|+++..| .|+.+++|+
T Consensus 112 ~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTK-G~ial~lP~ 189 (552)
T PRK13279 112 TALLAALIYLSLFLVYGIGTYAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTK-GFLALAVPV 189 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhc-chHHHHHHH
Confidence 467788889999998887766678888887776554 333331 1 356678889999999 444445553
No 21
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=93.43 E-value=1.3 Score=44.99 Aligned_cols=132 Identities=17% Similarity=0.250 Sum_probs=88.5
Q ss_pred HhHHHHHHhCCCCCCCC-CCcccchhHHHHH---hc-cchhhhh---------hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 020629 70 FSDAASLMASGDSPYKR-TTYRYSPLLAFFL---IP-NSIIHRS---------WGKFLFSASDLLVGVFIHSILKLRKVP 135 (323)
Q Consensus 70 l~DG~~l~~~G~sPY~~-~tyhytPLLl~ll---~p-~~~~~p~---------~~kllf~l~Dll~a~ll~~i~~~~~~~ 135 (323)
-|||.+.+..-.+=|.. +++-..|+.-... .. +....+. .+-.+=+.+=++++..++++.+....+
T Consensus 74 ~WDa~~FL~iae~gy~fEh~~AF~pl~P~~v~~~~~~~~~~~~~l~~~~~~~i~~~~vn~~~f~la~~~Lyql~~~~~~~ 153 (444)
T KOG2647|consen 74 SWDAEYFLFIAEHGYLFEHELAFFPLFPFVVRLVTEVLRPIEPVLSLRSILLISAVLVNIFFFMLAAVALYQLTRIILHD 153 (444)
T ss_pred hhhHHHHHHHHhhchHHhhhHHhccccHHHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 68888877544333653 4666666654332 20 1111111 122233355566777777776655455
Q ss_pred ccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHH
Q 020629 136 EDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYV 202 (323)
Q Consensus 136 ~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~ 202 (323)
.+.+...+++|.|||=.|.-+. |=+|++-.++.+..+++..+|+...+.++++++...+=--+.-.
T Consensus 154 ~k~s~~a~liFcfnPAsIF~ts-~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~ 219 (444)
T KOG2647|consen 154 PKISFYAALLFCFNPASIFLTA-GYSESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSA 219 (444)
T ss_pred hhHHhhhhheeEecchHhhhhH-HhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhH
Confidence 5567778899999999998555 88999999999999999999998889999998887774444333
No 22
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.73 E-value=2.1 Score=42.73 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=56.8
Q ss_pred hhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 020629 141 YSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFRIYPIIYVLPIILIL 209 (323)
Q Consensus 141 ~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~lalav~lklYPiil~~pl~l~l 209 (323)
..+++=.+.|..-+.+.--.-|.-..||+.+++|++..+|...|++.+|+|...|+--.. +.|++.+.
T Consensus 188 ~aA~~~alDp~l~amg~VAMLDIhvaFFtaL~~~fl~~~R~l~sgiAlGLAAs~K~SG~~-vfpil~~~ 255 (438)
T COG4346 188 IAALLAALDPLLRAMGGVAMLDIHVAFFTALFMYFLANDRPLWSGIALGLAASVKLSGAF-VFPILWYA 255 (438)
T ss_pred HHHHHHhhCcHHHHhcchhHHHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHhhcccc-hHHHHHHH
Confidence 445556799999877766778899999999999999999999999999999999988766 66666544
No 23
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=91.68 E-value=15 Score=36.51 Aligned_cols=98 Identities=19% Similarity=0.346 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHh------------
Q 020629 111 KFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLK------------ 178 (323)
Q Consensus 111 kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~k------------ 178 (323)
+++-.++-..+-+.+++..++.- .+..+.....+-++++.....++|--++++...+++.+++...+
T Consensus 85 Rl~~~~~s~~~d~~~~~~~~~~~-~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~~~~~ 163 (418)
T PF03901_consen 85 RLVLALLSALSDYYLYRLVKRLF-GSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSSSSSK 163 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCccccc
Confidence 44444444444444555443321 11234456667788999999899988999999999999998875
Q ss_pred CChHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 020629 179 GNVLQAAFWYGLVVHFRIYPIIYVLPIILIL 209 (323)
Q Consensus 179 g~~~laa~~lalav~lklYPiil~~pl~l~l 209 (323)
++....++..++++-.+.--+++..|+.+..
T Consensus 164 ~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~ 194 (418)
T PF03901_consen 164 RYLLAIGLLAGLAVFFRPTSALFWLPLGLYL 194 (418)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345677778889999988888888886544
No 24
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=90.31 E-value=17 Score=38.78 Aligned_cols=91 Identities=19% Similarity=0.278 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhh-hccCCC-chhHHHHHH---HHHHHHHHh-CC---
Q 020629 110 GKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFT-IGTRGN-CEPIVCAMI---LWIIICLLK-GN--- 180 (323)
Q Consensus 110 ~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~-~s~~gs-~e~~~~~lv---l~~Ly~~~k-g~--- 180 (323)
.++...++=++.|...+...+..+. +..+...+++|++.|+-.. .-.||| +|.+...++ ++.++...+ ++
T Consensus 26 y~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~ 104 (616)
T PF10131_consen 26 YKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRY 104 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchh
Confidence 4566666667777777777776655 5567788899999998775 345788 555433333 233333332 32
Q ss_pred hHHHHHHHHHHHHHhhhHHHH
Q 020629 181 VLQAAFWYGLVVHFRIYPIIY 201 (323)
Q Consensus 181 ~~laa~~lalav~lklYPiil 201 (323)
.+..|+++++....-+...++
T Consensus 105 ~~~lAl~~all~lsHll~~ll 125 (616)
T PF10131_consen 105 WILLALSMALLALSHLLSTLL 125 (616)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 355566666555544444333
No 25
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=89.29 E-value=29 Score=35.90 Aligned_cols=104 Identities=20% Similarity=0.305 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHhh----cCCCccchhhhHHhhhcchhhhhhccCCC--chhHHHHHHHHHHHHHHhCC
Q 020629 108 SWGKFLFSASDLLVGVF-IHSILKL----RKVPEDLCMYSAVVWLFNPFTFTIGTRGN--CEPIVCAMILWIIICLLKGN 180 (323)
Q Consensus 108 ~~~kllf~l~Dll~a~l-l~~i~~~----~~~~~~~~~~~~~lyLfNPl~I~~s~~gs--~e~~~~~lvl~~Ly~~~kg~ 180 (323)
.+.+.-=++.|++..+- +....+. ++.+++......++=++||=.|++-= |. =.+++.-+.++++.++.+|+
T Consensus 99 ~f~R~tVi~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH-~HFQYN~~~lGl~l~si~~~~~~~ 177 (469)
T PF03155_consen 99 LFMRLTVIVSDLLLYIPAVLFFCKSSGRSRNQSSKQRFIALLLILLNPGLILIDH-GHFQYNGFLLGLLLLSIAALIRGR 177 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHCchHHhhhh-hhhhHHHHHHHHHHHHHHHHHhcc
Confidence 45666667889877654 3222221 22223334455556689998887654 33 56777888899999999999
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHhccc
Q 020629 181 VLQAAFWYGLVVHFRIYPIIYVLPIILILDPL 212 (323)
Q Consensus 181 ~~laa~~lalav~lklYPiil~~pl~l~l~~~ 212 (323)
..+||++++++..+|=.-+.++||++.++.++
T Consensus 178 ~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~ 209 (469)
T PF03155_consen 178 YLLGAILFSLLLNFKQMFLYYAPAFFVYLLGS 209 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888654
No 26
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=88.29 E-value=14 Score=37.88 Aligned_cols=160 Identities=13% Similarity=0.078 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHhcccccccceeeecCCcchhHhHHHHHHhCCCCCCCCCCc-----ccchhHHHHH-hccchh--
Q 020629 34 RSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTY-----RYSPLLAFFL-IPNSII-- 105 (323)
Q Consensus 34 ~~~l~~g~~lRl~L~~~~~~~d~~~elsyTdidy~rl~DG~~l~~~G~sPY~~~ty-----hytPLLl~ll-~p~~~~-- 105 (323)
..++++++++|+..+..-+ + ..+. |+.++.|+|. +|. .-+.+.| |+.|+....- .-....
T Consensus 69 ~~l~~~~~i~ql~~i~~~~-----~-~p~~--D~~~v~~~A~---~~~-~~~~~~Y~~~yPnn~g~~l~~~~l~kifg~~ 136 (483)
T TIGR03766 69 IVIFILLLILQLILVTALH-----P-LIGW--DAGAVHTAAT---KSN-ESSISNYFSRNPNNLFLLLFMHFLYKLFGET 136 (483)
T ss_pred HHHHHHHHHHHHHHHHHcC-----C-CcCc--CHHHHHHHHh---cCC-CcccCceeeECCchHHHHHHHHHHHHHhCcc
Confidence 3456667888998888411 1 1212 5777777764 332 2222333 3334443221 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcch-hhhhhccCCCchhHHHHHHHHHHHHHH---h-CC
Q 020629 106 HRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNP-FTFTIGTRGNCEPIVCAMILWIIICLL---K-GN 180 (323)
Q Consensus 106 ~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNP-l~I~~s~~gs~e~~~~~lvl~~Ly~~~---k-g~ 180 (323)
.-...+++-+++=.+++++++++.++.-.. +.....+.+|.+.| ++..... -=+|....+++.+++++.. + ++
T Consensus 137 ~~~~~~llNil~~~~si~liy~i~k~lf~~-~~a~~a~~l~~l~~~~~~y~~~-~Ysd~~~l~~~~l~l~~~~~~~~~~~ 214 (483)
T TIGR03766 137 SWLFFDVVNIVLVDLSALILYKAVKKVFNK-KKAFVALYLFVLLLALSPYILI-PYTDTWVLPFVSLFLFLYTVISKKTD 214 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHhccc
Confidence 012235666666667777777777544322 23444555555554 3322222 1144445555555554322 2 11
Q ss_pred -------hHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 020629 181 -------VLQAAFWYGLVVHFRIYPIIYVLPIIL 207 (323)
Q Consensus 181 -------~~laa~~lalav~lklYPiil~~pl~l 207 (323)
.+.+|+++|++..+|.--+++++.+..
T Consensus 215 ~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i 248 (483)
T TIGR03766 215 LRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFI 248 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 258999999999999777777666543
No 27
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=80.56 E-value=43 Score=34.36 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHH---HH-HHHHhhcCCCccchhhhHHhhhcchhhhhhccCCC--chhHHHHHHHHHHHHHHhCCh
Q 020629 108 SWGKFLFSASDLLVGV---FI-HSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGN--CEPIVCAMILWIIICLLKGNV 181 (323)
Q Consensus 108 ~~~kllf~l~Dll~a~---ll-~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs--~e~~~~~lvl~~Ly~~~kg~~ 181 (323)
.+++.-=++.|+++-. +. .+...+ ..+...+...+++=+++|=.+++-- |. -.+++.-+.+.++-.++++..
T Consensus 136 lfMR~TViisd~liy~Pa~ify~~~~~r-~~~~~~~~a~~~~iLl~P~L~LID~-GHFQYNsisLGl~~~ai~~ll~~~~ 213 (510)
T KOG2575|consen 136 LFMRSTVIISDLLIYLPALIFYFKWLHR-TRSKKSKIAYAALILLYPSLLLIDH-GHFQYNSISLGLTLYAIAALLKNFY 213 (510)
T ss_pred HHHHHHHHHHhHHHHhhHHHHHHHHhhh-ccCcccHHHHHHHHHhCCceEEEec-CcceechhHHHHHHHHHHHHHHhHH
Confidence 4556666677877642 22 222321 1111222334566789998887766 44 567777888899999999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 020629 182 LQAAFWYGLVVHFRIYPIIYVLPIILILDP 211 (323)
Q Consensus 182 ~laa~~lalav~lklYPiil~~pl~l~l~~ 211 (323)
.+|++++.+|...|=.-+.+.+|++.++..
T Consensus 214 ~~as~~F~LAlnyKQMeLY~A~pfF~fLLg 243 (510)
T KOG2575|consen 214 VLASVLFVLALNYKQMELYHALPFFAFLLG 243 (510)
T ss_pred HHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 999999999999999999999999988854
No 28
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=57.86 E-value=1.9e+02 Score=28.24 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHh----C-----
Q 020629 109 WGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLK----G----- 179 (323)
Q Consensus 109 ~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~k----g----- 179 (323)
.+++.-.++-.+..++..|+.+..+ ...++=.+-|+++....+-|.|++.+.+..+.+....+ +
T Consensus 123 l~Rl~nll~~~~l~~~Ai~~~p~~k-------~l~~~i~l~Pm~~~~~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~ 195 (389)
T PF09913_consen 123 LGRLFNLLLYALLVYLAIKLAPRGK-------WLLALIALLPMTLFQAASVSYDGLIIALAFLFIALLLRLYRKKKITRR 195 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhH-------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 4566666666666666556553221 23455567899999999999999999877766666554 1
Q ss_pred ChHHHHHHHHHHHHHh-hhHHHHHHHH
Q 020629 180 NVLQAAFWYGLVVHFR-IYPIIYVLPI 205 (323)
Q Consensus 180 ~~~laa~~lalav~lk-lYPiil~~pl 205 (323)
..+..++..++.+..| .|..+...++
T Consensus 196 ~~~~l~v~~~ll~~~K~~y~~l~~l~l 222 (389)
T PF09913_consen 196 DLILLGVLAVLLALSKPPYIPLLLLLL 222 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1356677777778888 3433333333
No 29
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=54.73 E-value=22 Score=36.31 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHH---hhcCCCccchhhhHHhhhcchhhhhh-ccCCCchhHHHHHHHHHHHHHHhCChHHHHHHHH
Q 020629 114 FSASDLLVGVFIHSIL---KLRKVPEDLCMYSAVVWLFNPFTFTI-GTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYG 189 (323)
Q Consensus 114 f~l~Dll~a~ll~~i~---~~~~~~~~~~~~~~~lyLfNPl~I~~-s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa~~la 189 (323)
-++.|++-.+.+.+.. ++.+.+++.....+..=++||=.+++ .+--.-.++....+++++.++.++|+..+|+.++
T Consensus 105 VIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgfLfgilLlSI~~l~~kr~l~~A~~fs 184 (500)
T KOG2576|consen 105 VIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGFLFGILLLSIVFLKTKRYLLSAFLFS 184 (500)
T ss_pred hHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 4567877666654332 22222222233444445678755433 3344467788888899999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhccc
Q 020629 190 LVVHFRIYPIIYVLPIILILDPL 212 (323)
Q Consensus 190 lav~lklYPiil~~pl~l~l~~~ 212 (323)
...++|=.=+.++|....++.+.
T Consensus 185 vll~FKHIflY~ApaY~vylLr~ 207 (500)
T KOG2576|consen 185 VLLNFKHIFLYVAPAYFVYLLRN 207 (500)
T ss_pred HHHhhhhheeeechhHHHHHHHH
Confidence 99999955455555555555444
No 30
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=49.59 E-value=3.9e+02 Score=29.38 Aligned_cols=46 Identities=7% Similarity=0.176 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHHHHHhCC--------------hHHHHHHHHHHHHHhhhHHHHHHHHH
Q 020629 161 CEPIVCAMILWIIICLLKGN--------------VLQAAFWYGLVVHFRIYPIIYVLPII 206 (323)
Q Consensus 161 ~e~~~~~lvl~~Ly~~~kg~--------------~~laa~~lalav~lklYPiil~~pl~ 206 (323)
-|++..++.+.++|++.|=. ..++|+++|+|+..|..-++-..-+.
T Consensus 173 LDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgcaiSvK~vGlft~~~Vg 232 (723)
T KOG3359|consen 173 LDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCAISVKYVGLFTIALVG 232 (723)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhheeehhhhhHHHHHHHH
Confidence 68888899999999987421 25899999999999976665544443
No 31
>PLN02816 mannosyltransferase
Probab=46.80 E-value=3.8e+02 Score=28.37 Aligned_cols=66 Identities=12% Similarity=-0.014 Sum_probs=39.8
Q ss_pred HHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHH---------hCChHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 020629 143 AVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLL---------KGNVLQAAFWYGLVVHFRIYPIIYVLPIILI 208 (323)
Q Consensus 143 ~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~---------kg~~~laa~~lalav~lklYPiil~~pl~l~ 208 (323)
.++-+.||+....++|-=+.++.+.++++++|... ..+...+-++-|+|+-++.--+++.+|+.+.
T Consensus 153 L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~~~~~~~L~la~la~~iRPt~ailwl~l~l~ 227 (546)
T PLN02816 153 LFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPVNRKWGLVIAALACAIRPTSAVIWLYVGML 227 (546)
T ss_pred HHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445688777655655577888888888888752 1122233344445655676666666666543
No 32
>PF14897 EpsG: EpsG family
Probab=46.27 E-value=2.5e+02 Score=26.08 Aligned_cols=125 Identities=12% Similarity=0.198 Sum_probs=59.1
Q ss_pred cchhHhHHHHHHhCCCCCCCCCCcccchhHHHHH-hccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHH
Q 020629 66 DYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFL-IPNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAV 144 (323)
Q Consensus 66 dy~rl~DG~~l~~~G~sPY~~~tyhytPLLl~ll-~p~~~~~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~ 144 (323)
|+.+..+......++.+-++. .+.-|....+. .-+... .. -..+..+..+++...+....++..+.. .......
T Consensus 24 D~~~Y~~~y~~~~~~~~~~~~--~~~E~~~~~l~~~~~~~~-~~-~~~~~~i~~~i~~~~~~~~i~~~~~~~-~~~~~~~ 98 (330)
T PF14897_consen 24 DYYNYYEIYDEISNNSFNFSE--YGFEPGFYLLNYLFSYFG-FN-YQFFFFIISFISLFLFFFFIKKYSKNY-PIFLSLF 98 (330)
T ss_pred cHHHHHHHHHHHhcccccccc--ccCCHHHHHHHHHHHHHC-CC-HHHHHHHHHHHHHHHHHHhHHHcccch-HHHHHHH
Confidence 576666665555555443322 34445433322 111100 00 133444445555555555555433221 1223333
Q ss_pred hhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCChHHHH--HHHHHHHHHhh
Q 020629 145 VWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAA--FWYGLVVHFRI 196 (323)
Q Consensus 145 lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~~~laa--~~lalav~lkl 196 (323)
+| +.++....+..+--.++...+++.++....++|+..+. +.+|...|.+.
T Consensus 99 l~-~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~Sa 151 (330)
T PF14897_consen 99 LF-FSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYSA 151 (330)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 44 34444433333333444445566667777777765543 45677888776
No 33
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=43.32 E-value=1.4e+02 Score=26.83 Aligned_cols=69 Identities=17% Similarity=0.265 Sum_probs=42.2
Q ss_pred hhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhC----------C-hHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 020629 141 YSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKG----------N-VLQAAFWYGLVVHFRIYPIIYVLPIILIL 209 (323)
Q Consensus 141 ~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg----------~-~~laa~~lalav~lklYPiil~~pl~l~l 209 (323)
..++.|.|.|-.=..++-.--=++.++++.+.+|..+|- | ..+.++..|++...-+.-++.+|++.+.+
T Consensus 87 v~al~fafS~sfW~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~ 166 (178)
T PF11028_consen 87 VGALAFAFSDSFWFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLY 166 (178)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777776655554444556667777777776531 2 24677777776665566666666665444
No 34
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=43.22 E-value=2.9e+02 Score=26.10 Aligned_cols=102 Identities=11% Similarity=0.099 Sum_probs=60.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhhhcchhhhhhccCCCc-h--hHHHHHHHHHHHHHHhCChH-
Q 020629 107 RSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVWLFNPFTFTIGTRGNC-E--PIVCAMILWIIICLLKGNVL- 182 (323)
Q Consensus 107 p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~lyLfNPl~I~~s~~gs~-e--~~~~~lvl~~Ly~~~kg~~~- 182 (323)
|++..++.+++=.+++..+.+..+.++ +.......+....||+.+-.-.-+.. . ++..++..++.+...|++..
T Consensus 49 ~pl~~iLs~~~la~s~~~~~~~~~~~~--~~~~~l~~~~~~~~P~~~~~lsy~~~s~~~~ls~~l~~la~~~~~k~~~~~ 126 (319)
T PF14264_consen 49 PPLPQILSILFLALSAVLLVRLFDIKS--SFISVLFSLLFISSPFFLENLSYRFDSLPMALSLLLAVLAFYFLKKSKIGF 126 (319)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCccc--hHHHHHHHHHHHHhHHHHHHHHHHHccHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 445566666666677777777764332 22345667788999999865553322 2 33334444555555555432
Q ss_pred -HH--HHHHHHHHHHhhhHHHHHHHHHHHhc
Q 020629 183 -QA--AFWYGLVVHFRIYPIIYVLPIILILD 210 (323)
Q Consensus 183 -la--a~~lalav~lklYPiil~~pl~l~l~ 210 (323)
.| .+.+++++|+...++....-+...+.
T Consensus 127 ~~~~~ll~~sl~~YQa~~~v~i~l~~~~~l~ 157 (319)
T PF14264_consen 127 LISILLLVLSLGIYQASINVFISLVLIILLL 157 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 34567788888888776666655543
No 35
>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 667 to 694 amino acids in length.
Probab=39.77 E-value=3.8e+02 Score=29.32 Aligned_cols=96 Identities=11% Similarity=0.085 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCC-CccchhhhHHhhhcchhhhhhccCCCchhHHHHHHHHHHHHHHhCC---------hHH
Q 020629 114 FSASDLLVGVFIHSILKLRKV-PEDLCMYSAVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGN---------VLQ 183 (323)
Q Consensus 114 f~l~Dll~a~ll~~i~~~~~~-~~~~~~~~~~lyLfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~kg~---------~~l 183 (323)
+.+.=.+..+=..+++++.+. +...+...+..|.+||.++..-.+-|+|....++.=+.+.-++++. ...
T Consensus 80 wallL~vaf~G~~rLa~~L~igs~~~r~~Aa~~YaLsPr~Lttlg~iSse~lP~al~PWvLlPlv~~~r~~~~~rr~aa~ 159 (680)
T PF11847_consen 80 WALLLTVAFWGALRLARALGIGSPASRVLAAVAYALSPRVLTTLGAISSETLPMALAPWVLLPLVRALRGRGSPRRAAAR 159 (680)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhccCcchhHHHHH
Confidence 333333444555566665432 2334567788899999999886677888888887766665554332 234
Q ss_pred HHHHHHHHHHH--hhhHHHHHHHHHHHh
Q 020629 184 AAFWYGLVVHF--RIYPIIYVLPIILIL 209 (323)
Q Consensus 184 aa~~lalav~l--klYPiil~~pl~l~l 209 (323)
|++..++...+ .---..+++|.+.++
T Consensus 160 salaV~~mGaVNA~atlaa~l~~~l~ll 187 (680)
T PF11847_consen 160 SALAVALMGAVNAVATLAALLPAGLWLL 187 (680)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhhhee
Confidence 44444443333 344455555655555
No 36
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=30.56 E-value=7.6e+02 Score=27.13 Aligned_cols=36 Identities=22% Similarity=0.599 Sum_probs=22.9
Q ss_pred CCc-chhHhHHHHHHhCC-----CCCCCC----CCcccchhHHHHH
Q 020629 64 DVD-YLVFSDAASLMASG-----DSPYKR----TTYRYSPLLAFFL 99 (323)
Q Consensus 64 did-y~rl~DG~~l~~~G-----~sPY~~----~tyhytPLLl~ll 99 (323)
+.| |..++.--.++.+| .+||+. ...+++|+..++.
T Consensus 50 e~Dpyy~~r~~~~~l~~g~~~~~~~~~~~YP~G~~i~~~pl~~~l~ 95 (773)
T COG1287 50 EFDPYYHYRLIENLLKNGPPRDFFDPYDNYPPGSPIDFPPLFLYLT 95 (773)
T ss_pred CCCcHHHHHHHHHHHHhCCCccCCChhhcCCCCCCCCCCchHHHHH
Confidence 555 45555555566666 466653 3467899998876
No 37
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=29.44 E-value=5.1e+02 Score=27.32 Aligned_cols=129 Identities=14% Similarity=0.149 Sum_probs=77.8
Q ss_pred HHHHhCCCCCCCCCCcccchhHHHHHh-------ccchhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhhHHhh
Q 020629 74 ASLMASGDSPYKRTTYRYSPLLAFFLI-------PNSIIHRSWGKFLFSASDLLVGVFIHSILKLRKVPEDLCMYSAVVW 146 (323)
Q Consensus 74 ~~l~~~G~sPY~~~tyhytPLLl~ll~-------p~~~~~p~~~kllf~l~Dll~a~ll~~i~~~~~~~~~~~~~~~~ly 146 (323)
.+++.+|-.-|+ ..-+.|+|..... -+.... -....++...=.+++|+..+-+.+. + -...+.+=
T Consensus 50 Lk~l~~Gaw~Yr--Pi~HGPfL~hvn~avF~~lGasData-RlvvAv~G~llpL~awL~R~rL~d~---e--vlal~~LL 121 (556)
T COG4745 50 LKYLEQGAWSYR--PIYHGPFLYHVNYAVFGLLGASDATA-RLVVAVTGVLLPLTAWLYRTRLGDK---E--VLALATLL 121 (556)
T ss_pred HHHHhcCcceec--ccccCchhhhhhhhhhhhcccchhhh-hhhHHHhhhHHHHHHHHHHHhccch---H--HHHHHHHH
Confidence 466677876665 3345567654431 111000 1223445555566777765443221 1 12234445
Q ss_pred hcchhhhhhccCCCchhHHHHHHHHHHHHHHh----CC---hHHHHHHHHHHHHHh----hhHHHHHHHHHHHhc
Q 020629 147 LFNPFTFTIGTRGNCEPIVCAMILWIIICLLK----GN---VLQAAFWYGLVVHFR----IYPIIYVLPIILILD 210 (323)
Q Consensus 147 LfNPl~I~~s~~gs~e~~~~~lvl~~Ly~~~k----g~---~~laa~~lalav~lk----lYPiil~~pl~l~l~ 210 (323)
.+||-...=|=-.-.|.+..++.++++.++.+ +| ...++..+|++.-.| +|++++.-...+.+.
T Consensus 122 A~sPvlVYYSRFmR~Dl~la~ftl~aVg~~vR~lDt~R~~yL~~sA~~lalAftaKEnall~~~~f~ga~alv~d 196 (556)
T COG4745 122 AFSPVLVYYSRFMRNDLLLAAFTLLAVGFAVRYLDTERFRYLYASAVSLALAFTAKENALLYVAAFLGASALVLD 196 (556)
T ss_pred hcChhhhhHHHHHhhhHHHHHHHHHHHHHHHHHhhcccccchhhhhhhhhhhhhhcccceeHHHHHhchhHHHHH
Confidence 69998887665566899999999999999875 21 247888888888888 777777644444443
No 38
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=22.70 E-value=5.3e+02 Score=23.36 Aligned_cols=67 Identities=18% Similarity=0.324 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCc-----cchhhhHHhhhcchhhhhhcc--CCCchhHHHHHHHHHHH
Q 020629 108 SWGKFLFSASDLLVGVFIHSILKLRKVPE-----DLCMYSAVVWLFNPFTFTIGT--RGNCEPIVCAMILWIII 174 (323)
Q Consensus 108 ~~~kllf~l~Dll~a~ll~~i~~~~~~~~-----~~~~~~~~lyLfNPl~I~~s~--~gs~e~~~~~lvl~~Ly 174 (323)
..+-+.+.++.+++|.+-+-++++.+..- ...+..+.+++|||+.=.+-. .-+.+.+.+-+.+..+|
T Consensus 71 ~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~lnP~fp~~~~~~~l~~nTiiT~~CiyiLy 144 (173)
T PF11085_consen 71 LIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVLNPIFPMIKPVTELDWNTIITTLCIYILY 144 (173)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcccccCChhhhhCchhHHHHHHHHHHHH
Confidence 45667788888888887777777655321 123455667899999733322 23344444444444444
Done!