Your job contains 1 sequence.
>020632
MAEYYPPPAGLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFP
AYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQS
ALGAMYALNKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVH
MPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLG
PTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCVCVCHILFSLLFKEKLSDGI
SSNWDQWRLRSWIQSFKCVEFAK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020632
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060015 - symbol:AT2G42240 species:3702 "Arabi... 617 3.1e-60 1
TAIR|locus:2091526 - symbol:AT3G13700 species:3702 "Arabi... 221 1.6e-28 2
TAIR|locus:504955737 - symbol:AT3G21215 species:3702 "Ara... 230 3.1e-19 1
WB|WBGene00003172 - symbol:mec-8 species:6239 "Caenorhabd... 150 9.1e-15 2
UNIPROTKB|G5ECJ4 - symbol:mec-8 "Protein MEC-8" species:6... 150 9.1e-15 2
FB|FBgn0263995 - symbol:cpo "couch potato" species:7227 "... 153 1.1e-14 2
UNIPROTKB|Q6ZRY4 - symbol:RBPMS2 "RNA-binding protein wit... 175 3.2e-13 1
MGI|MGI:1919223 - symbol:Rbpms2 "RNA binding protein with... 175 3.2e-13 1
ZFIN|ZDB-GENE-040426-741 - symbol:rbpms2b "RNA binding pr... 174 4.2e-13 1
ZFIN|ZDB-GENE-040718-106 - symbol:rbpms2a "RNA binding pr... 173 5.5e-13 1
UNIPROTKB|Q9W6I1 - symbol:RBPMS "RNA-binding protein with... 172 7.1e-13 1
UNIPROTKB|E2QU21 - symbol:RBPMS2 "Uncharacterized protein... 172 7.1e-13 1
UNIPROTKB|F1P2M9 - symbol:RBPMS2 "Uncharacterized protein... 170 1.2e-12 1
UNIPROTKB|F1N2U8 - symbol:RBPMS2 "Uncharacterized protein... 170 1.2e-12 1
UNIPROTKB|Q9YGP5 - symbol:rbpms "RNA-binding protein with... 169 1.6e-12 1
UNIPROTKB|F1S0B2 - symbol:RBPMS2 "Uncharacterized protein... 168 2.1e-12 1
RGD|1561222 - symbol:Rbpms2 "RNA binding protein with mul... 168 2.1e-12 1
UNIPROTKB|F1NZ89 - symbol:RBPMS2 "Uncharacterized protein... 165 4.6e-12 1
UNIPROTKB|F1MAV3 - symbol:RBPMS "Uncharacterized protein"... 165 4.6e-12 1
UNIPROTKB|E2R5F7 - symbol:RBPMS "Uncharacterized protein"... 165 4.6e-12 1
UNIPROTKB|B4E3T4 - symbol:RBPMS "HCG2043421, isoform CRA_... 165 4.6e-12 1
UNIPROTKB|F5H357 - symbol:RBPMS "RNA-binding protein with... 165 4.6e-12 1
UNIPROTKB|Q93062 - symbol:RBPMS "RNA-binding protein with... 165 4.6e-12 1
UNIPROTKB|F1RX64 - symbol:RBPMS "Uncharacterized protein"... 165 4.6e-12 1
MGI|MGI:1334446 - symbol:Rbpms "RNA binding protein gene ... 165 4.6e-12 1
UNIPROTKB|F1NAP9 - symbol:RBPMS "RNA-binding protein with... 163 7.9e-12 1
RGD|1561067 - symbol:Rbpms "RNA binding protein with mult... 158 2.9e-11 1
UNIPROTKB|F1M7J8 - symbol:Rbpms "Protein Rbpms" species:1... 158 2.9e-11 1
UNIPROTKB|F1M9Y9 - symbol:Rbpms "Protein Rbpms" species:1... 158 2.9e-11 1
UNIPROTKB|H0YBU9 - symbol:RBPMS "RNA-binding protein with... 144 1.1e-09 1
POMBASE|SPCC320.07c - symbol:mde7 "RNA-binding protein Md... 89 6.0e-05 2
DICTYBASE|DDB_G0268988 - symbol:DDB_G0268988 "RNA-binding... 119 0.00013 1
POMBASE|SPCC16C4.07 - symbol:scw1 "RNA-binding protein Sc... 97 0.00020 2
ASPGD|ASPL0000063387 - symbol:AN7700 species:162425 "Emer... 119 0.00032 1
WB|WBGene00017929 - symbol:grld-1 species:6239 "Caenorhab... 96 0.00043 2
>TAIR|locus:2060015 [details] [associations]
symbol:AT2G42240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOGENOM:HOG000242657 UniGene:At.73056 EMBL:AK228665
IPI:IPI00570582 RefSeq:NP_001078040.1 ProteinModelPortal:Q0WQM7
SMR:Q0WQM7 EnsemblPlants:AT2G42240.2 GeneID:818824
KEGG:ath:AT2G42240 TAIR:At2g42240 OMA:CPTLFVA PhylomeDB:Q0WQM7
ProtClustDB:CLSN2699079 Genevestigator:Q0WQM7 Uniprot:Q0WQM7
Length = 302
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 139/234 (59%), Positives = 159/234 (67%)
Query: 55 YSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAV 114
Y + + G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAV
Sbjct: 36 YLPTHVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAV 94
Query: 115 FSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAF 167
FSD QSA+ M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + +
Sbjct: 95 FSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT- 152
Query: 168 SRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKN 227
T + G GS PGM +SA+NTIGY QS G + S PS K
Sbjct: 153 ---TTESGFGSFQTPGMSSSAYNTIGYSPAQSQ-------GIANVAGRAPTSRKPS--KA 200
Query: 228 VTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
PC TLF+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 201 ADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 254
>TAIR|locus:2091526 [details] [associations]
symbol:AT3G13700 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AP001307 UniGene:At.39361
OMA:APSANGH IPI:IPI00523019 RefSeq:NP_187983.1
ProteinModelPortal:B3H4P0 SMR:B3H4P0 PRIDE:B3H4P0
EnsemblPlants:AT3G13700.1 GeneID:820579 KEGG:ath:AT3G13700
TAIR:At3g13700 eggNOG:NOG298185 HOGENOM:HOG000242657
PhylomeDB:B3H4P0 ProtClustDB:CLSN2684800 ArrayExpress:B3H4P0
Genevestigator:B3H4P0 Uniprot:B3H4P0
Length = 296
Score = 221 (82.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 65/177 (36%), Positives = 86/177 (48%)
Query: 111 AFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARG 163
AFA F+ + AL AM LN GS L+I+LA+SNSR K + D + +
Sbjct: 97 AFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNRNKE 156
Query: 164 PSAFSRGTADLGIGS---VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSS 220
S +D G V PG +S T+S D+ S +A +
Sbjct: 157 ISKSQDDQSDEGDSDPDEVQEPGNSDSPKEN---DTTKSEA--DSEPDSKAPSANGHLEK 211
Query: 221 APSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
A G C+TLF+ANLGP CTE EL Q+ S+ PGF LKI++ G PVAF DF+
Sbjct: 212 ASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFE 268
Score = 112 (44.5 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ 108
+ TLFV+GLP DVK REI+NLFR G+ES L+ + + Q
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQ 76
>TAIR|locus:504955737 [details] [associations]
symbol:AT3G21215 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P09012 eggNOG:NOG255497
HOGENOM:HOG000242657 EMBL:AF361632 EMBL:AY143892 EMBL:AK118175
EMBL:AK226266 EMBL:AK317062 IPI:IPI00534607 RefSeq:NP_683582.2
UniGene:At.27825 ProteinModelPortal:Q9ASW4 SMR:Q9ASW4 IntAct:Q9ASW4
PaxDb:Q9ASW4 PRIDE:Q9ASW4 EnsemblPlants:AT3G21215.1 GeneID:821675
KEGG:ath:AT3G21215 TAIR:At3g21215 InParanoid:Q9ASW4 OMA:EASQVNF
PhylomeDB:Q9ASW4 ProtClustDB:CLSN2680031 Genevestigator:Q9ASW4
Uniprot:Q9ASW4
Length = 339
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 75/233 (32%), Positives = 109/233 (46%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
YDE+RT+F+AGLP+DVK RE+ NL R PGYE+S + + + +P FA+FS Q A+ A
Sbjct: 55 YDELRTIFIAGLPDDVKERELLNLLRWLPGYEASQV--NFKGEKPMGFALFSTAQFAMAA 112
Query: 125 -------MYALNKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIG 177
++ S ++ ++AK N KR D D+ R R D
Sbjct: 113 KDTLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDS-NAYDQSKR-----LRTGGDC-TH 165
Query: 178 SVHMPGMGNSAFNTI-GYPH---TQSHENFDARGGSLITTAKFNNS---SAPSG--P--- 225
SV+ P + + G PH + +D G +APS P
Sbjct: 166 SVYSPSPFHPPPPPVWGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQN 225
Query: 226 -KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+EL + S PGF ++KI V F++F+
Sbjct: 226 IKDNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFE 278
>WB|WBGene00003172 [details] [associations]
symbol:mec-8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0048644
"muscle organ morphogenesis" evidence=IGI;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0031581 "hemidesmosome assembly"
evidence=IGI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0000166 GO:GO:0048644 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048666 EMBL:Z81037 GO:GO:0031581 GO:GO:0007638
HSSP:P09012 GeneTree:ENSGT00500000044861 EMBL:X95609 EMBL:Z81084
PIR:T19360 RefSeq:NP_492508.1 SMR:G5ECJ4 IntAct:G5ECJ4
EnsemblMetazoa:F46A9.6.1 EnsemblMetazoa:F46A9.6.2
EnsemblMetazoa:F46A9.6.3 GeneID:172771 KEGG:cel:CELE_F46A9.6
CTD:172771 WormBase:F46A9.6 OMA:APSANGH NextBio:876941
Uniprot:G5ECJ4
Length = 312
Score = 150 (57.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFA---FAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR GYE + L+ +++N +P + F F QQ A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQD 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSR 149
A L L ++LAKSN++ R +
Sbjct: 89 ARKMLQGVRFDPECAQVLRLELAKSNTKVARPK 121
Score = 97 (39.2 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 220 SAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
S + + + C+TLFVANL E L VF GF +L++ + G VAFV++
Sbjct: 216 SQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 272
>UNIPROTKB|G5ECJ4 [details] [associations]
symbol:mec-8 "Protein MEC-8" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0000166 GO:GO:0048644 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0048666 EMBL:Z81037 GO:GO:0031581 GO:GO:0007638 HSSP:P09012
GeneTree:ENSGT00500000044861 EMBL:X95609 EMBL:Z81084 PIR:T19360
RefSeq:NP_492508.1 SMR:G5ECJ4 IntAct:G5ECJ4
EnsemblMetazoa:F46A9.6.1 EnsemblMetazoa:F46A9.6.2
EnsemblMetazoa:F46A9.6.3 GeneID:172771 KEGG:cel:CELE_F46A9.6
CTD:172771 WormBase:F46A9.6 OMA:APSANGH NextBio:876941
Uniprot:G5ECJ4
Length = 312
Score = 150 (57.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFA---FAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR GYE + L+ +++N +P + F F QQ A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQD 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSR 149
A L L ++LAKSN++ R +
Sbjct: 89 ARKMLQGVRFDPECAQVLRLELAKSNTKVARPK 121
Score = 97 (39.2 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 220 SAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
S + + + C+TLFVANL E L VF GF +L++ + G VAFV++
Sbjct: 216 SQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 272
>FB|FBgn0263995 [details] [associations]
symbol:cpo "couch potato" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS;IDA] [GO:0007422 "peripheral nervous system
development" evidence=NAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IMP] [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0022611 "dormancy process" evidence=IMP]
[GO:0035206 "regulation of hemocyte proliferation" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0007275 GO:GO:0005634
GO:GO:0000166 GO:GO:0007268 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0042048 GO:GO:0035206 CTD:130749 EMBL:Z14311 EMBL:Z14312
EMBL:Z14974 EMBL:AY129455 EMBL:BT001569 PIR:A46230 PIR:S24761
RefSeq:NP_001014631.2 RefSeq:NP_001014632.2 RefSeq:NP_001163640.1
RefSeq:NP_001163641.1 RefSeq:NP_524844.5 RefSeq:NP_732282.5
RefSeq:NP_732283.4 RefSeq:NP_732284.4 UniGene:Dm.6154
ProteinModelPortal:Q01617 SMR:Q01617 IntAct:Q01617 MINT:MINT-335471
STRING:Q01617 PaxDb:Q01617 GeneID:45840 GeneID:8674070
KEGG:dme:Dmel_CG31243 KEGG:dme:Dmel_CG42457 FlyBase:FBgn0000363
eggNOG:NOG255204 InParanoid:Q01617 OrthoDB:EOG4H44N8 ChiTaRS:CPO
NextBio:838394 Bgee:Q01617 GermOnline:CG31243 GO:GO:0022611
Uniprot:Q01617
Length = 738
Score = 153 (58.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVF------- 115
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F
Sbjct: 448 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 507
Query: 116 SDQQSALGAMYALNKGSTLYIDLAKSNSRSKRSR 149
+ +Q G + + T+ ++ AKSN++ + +
Sbjct: 508 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPK 541
Score = 106 (42.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 30/91 (32%), Positives = 41/91 (45%)
Query: 165 SAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSG 224
+A + A G G+ SA T SH ++ + NN+S P
Sbjct: 635 AAAAAAAAGGGGGAATAAAAPQSAAATAAAAAAASHHHYLSSPALASPAGSTNNASHPGN 694
Query: 225 PKNVT--PCATLFVANLGPTCTEQELTQVFS 253
P+ PC+TLFVANLG +E EL +VFS
Sbjct: 695 PQIAANAPCSTLFVANLGQFVSEHELKEVFS 725
>UNIPROTKB|Q6ZRY4 [details] [associations]
symbol:RBPMS2 "RNA-binding protein with multiple splicing
2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
eggNOG:NOG255204 CTD:348093 HOGENOM:HOG000017369 HOVERGEN:HBG069897
OrthoDB:EOG42RD8G EMBL:AY369207 EMBL:AK127873 IPI:IPI00238688
RefSeq:NP_919248.1 UniGene:Hs.436518 HSSP:P09012
ProteinModelPortal:Q6ZRY4 SMR:Q6ZRY4 STRING:Q6ZRY4
PhosphoSite:Q6ZRY4 DMDM:74762401 PaxDb:Q6ZRY4 PRIDE:Q6ZRY4
DNASU:348093 Ensembl:ENST00000300069 GeneID:348093 KEGG:hsa:348093
UCSC:uc002anq.3 GeneCards:GC15M065032 HGNC:HGNC:19098
neXtProt:NX_Q6ZRY4 PharmGKB:PA134871904 InParanoid:Q6ZRY4
OMA:KLTSRQP PhylomeDB:Q6ZRY4 ChiTaRS:RBPMS2 GenomeRNAi:348093
NextBio:99336 ArrayExpress:Q6ZRY4 Bgee:Q6ZRY4 CleanEx:HS_RBPMS2
Genevestigator:Q6ZRY4 Uniprot:Q6ZRY4
Length = 209
Score = 175 (66.7 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 47/125 (37%), Positives = 69/125 (55%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSD-KKARGPSAFSRGTADLGIG 177
ALN TL ++ AK+N++ +S+ S+ A G +R DL +G
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPSNVHPALGAHFIARDPYDL-MG 144
Query: 178 SVHMP 182
+ +P
Sbjct: 145 AALIP 149
>MGI|MGI:1919223 [details] [associations]
symbol:Rbpms2 "RNA binding protein with multiple splicing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1919223 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG255204 CTD:348093
HOGENOM:HOG000017369 HOVERGEN:HBG069897 OrthoDB:EOG42RD8G
HSSP:P09012 OMA:KLTSRQP EMBL:AK144659 EMBL:AK156633 EMBL:BC021788
IPI:IPI00121434 RefSeq:NP_082306.2 UniGene:Mm.29148
ProteinModelPortal:Q8VC52 SMR:Q8VC52 PhosphoSite:Q8VC52
PaxDb:Q8VC52 PRIDE:Q8VC52 DNASU:71973 Ensembl:ENSMUST00000055844
GeneID:71973 KEGG:mmu:71973 UCSC:uc009qdt.1
GeneTree:ENSGT00500000044861 InParanoid:Q8VC52 NextBio:335098
Bgee:Q8VC52 CleanEx:MM_RBPMS2 Genevestigator:Q8VC52 Uniprot:Q8VC52
Length = 206
Score = 175 (66.7 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/91 (42%), Positives = 57/91 (62%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 22 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 79
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 80 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 110
>ZFIN|ZDB-GENE-040426-741 [details] [associations]
symbol:rbpms2b "RNA binding protein with multiple
splicing 2b" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-741 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG255204
HOGENOM:HOG000017369 HOVERGEN:HBG069897 OrthoDB:EOG42RD8G
GeneTree:ENSGT00500000044861 EMBL:BX663612 EMBL:CR354581
EMBL:BC048876 EMBL:BC066414 EMBL:AB080736 IPI:IPI00498043
RefSeq:NP_956553.1 UniGene:Dr.81683 STRING:Q7ZUL7
Ensembl:ENSDART00000006619 GeneID:393229 KEGG:dre:393229 CTD:393229
OMA:TDIKPRE NextBio:20814293 Uniprot:Q7ZUL7
Length = 200
Score = 174 (66.3 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 39/91 (42%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 17 EEVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 75 NALNGVRFDPENPQTLRLEFAKANTKMAKSK 105
>ZFIN|ZDB-GENE-040718-106 [details] [associations]
symbol:rbpms2a "RNA binding protein with multiple
splicing 2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040718-106 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG255204
HOGENOM:HOG000017369 HOVERGEN:HBG069897 OrthoDB:EOG42RD8G
OMA:KLTSRQP GeneTree:ENSGT00500000044861 EMBL:BX296538
EMBL:CU570688 EMBL:BC076171 EMBL:BC152178 IPI:IPI00486507
RefSeq:NP_001002409.1 UniGene:Dr.82744 STRING:Q6DH13
Ensembl:ENSDART00000067514 GeneID:436682 KEGG:dre:436682 CTD:436682
InParanoid:Q6DH13 NextBio:20831125 Uniprot:Q6DH13
Length = 199
Score = 173 (66.0 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 39/91 (42%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 17 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 75 NALNGIRFDPESPQTLRLEFAKANTKMAKSK 105
>UNIPROTKB|Q9W6I1 [details] [associations]
symbol:RBPMS "RNA-binding protein with multiple splicing"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0010862 "positive
regulation of pathway-restricted SMAD protein phosphorylation"
evidence=ISS] [GO:0060391 "positive regulation of SMAD protein
import into nucleus" evidence=ISS] [GO:0008143 "poly(A) RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003713 GO:GO:0010862 GO:GO:0060391
eggNOG:NOG255204 GO:GO:0008143 EMBL:AF129933 IPI:IPI00591826
RefSeq:NP_990200.1 UniGene:Gga.2695 ProteinModelPortal:Q9W6I1
GeneID:395678 KEGG:gga:395678 CTD:348093 HOGENOM:HOG000017369
HOVERGEN:HBG069897 InParanoid:Q9W6I1 OrthoDB:EOG42RD8G
NextBio:20815750 Uniprot:Q9W6I1
Length = 200
Score = 172 (65.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 39/91 (42%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 19 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAK 76
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 77 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 107
>UNIPROTKB|E2QU21 [details] [associations]
symbol:RBPMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:348093
OMA:KLTSRQP GeneTree:ENSGT00500000044861 EMBL:AAEX03016208
RefSeq:XP_853385.2 Ensembl:ENSCAFT00000027080 GeneID:610746
KEGG:cfa:610746 NextBio:20896295 Uniprot:E2QU21
Length = 214
Score = 172 (65.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 32 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 89
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 90 NALNGIRFDPENPQTLRLEFAKANTKMAKNK 120
>UNIPROTKB|F1P2M9 [details] [associations]
symbol:RBPMS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00591826
OMA:KLTSRQP GeneTree:ENSGT00500000044861 EMBL:AADN02051088
Ensembl:ENSGALT00000040332 Uniprot:F1P2M9
Length = 198
Score = 170 (64.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 18 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 75
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 76 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 105
>UNIPROTKB|F1N2U8 [details] [associations]
symbol:RBPMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:KLTSRQP
GeneTree:ENSGT00500000044861 EMBL:DAAA02028733 IPI:IPI00688079
Ensembl:ENSBTAT00000014659 Uniprot:F1N2U8
Length = 203
Score = 170 (64.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/90 (42%), Positives = 56/90 (62%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 23 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 80
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 81 ALNGIRFDPENPQTLRLEFAKANTKMAKNK 110
>UNIPROTKB|Q9YGP5 [details] [associations]
symbol:rbpms "RNA-binding protein with multiple splicing"
species:8355 "Xenopus laevis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0008143 "poly(A) RNA
binding" evidence=ISS] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=ISS]
[GO:0060391 "positive regulation of SMAD protein import into
nucleus" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003713 GO:GO:0010862 GO:GO:0060391
GO:GO:0008143 HOVERGEN:HBG069897 CTD:11030 EMBL:AF107889
EMBL:BC097507 RefSeq:NP_001081864.1 UniGene:Xl.449
ProteinModelPortal:Q9YGP5 GeneID:398092 KEGG:xla:398092
Uniprot:Q9YGP5
Length = 196
Score = 169 (64.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A
Sbjct: 17 EEVRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 75 NALNGIRFDPENPQTLRLEFAKANTKMAKNK 105
>UNIPROTKB|F1S0B2 [details] [associations]
symbol:RBPMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:KLTSRQP
GeneTree:ENSGT00500000044861 EMBL:CU633631
Ensembl:ENSSSCT00000005024 Uniprot:F1S0B2
Length = 195
Score = 168 (64.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 38/94 (40%), Positives = 57/94 (60%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G +VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A
Sbjct: 10 GLCPQVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAE 67
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSR 149
A ALN TL ++ AK+N++ +++
Sbjct: 68 AAKNALNGIRFDPENPQTLRLEFAKANTKMAKNK 101
>RGD|1561222 [details] [associations]
symbol:Rbpms2 "RNA binding protein with multiple splicing 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1561222 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:KLTSRQP GeneTree:ENSGT00500000044861
IPI:IPI00766399 Ensembl:ENSRNOT00000021337 UCSC:RGD:1561222
ArrayExpress:F1M9N3 Uniprot:F1M9N3
Length = 181
Score = 168 (64.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A A
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAKSK 87
>UNIPROTKB|F1NZ89 [details] [associations]
symbol:RBPMS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00500000044861 EMBL:AADN02051088 IPI:IPI00819063
Ensembl:ENSGALT00000003715 Uniprot:F1NZ89
Length = 180
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAKSK 87
>UNIPROTKB|F1MAV3 [details] [associations]
symbol:RBPMS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060391 "positive regulation of SMAD protein import
into nucleus" evidence=IEA] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003713 GO:GO:0010862
GO:GO:0060391 GO:GO:0008143 OMA:PEVWGPY
GeneTree:ENSGT00500000044861 EMBL:DAAA02060452 IPI:IPI00722097
UniGene:Bt.106824 Ensembl:ENSBTAT00000047899 Uniprot:F1MAV3
Length = 219
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|E2R5F7 [details] [associations]
symbol:RBPMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060391 "positive regulation of SMAD protein
import into nucleus" evidence=IEA] [GO:0010862 "positive regulation
of pathway-restricted SMAD protein phosphorylation" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003713 GO:GO:0010862
GO:GO:0060391 GO:GO:0008143 CTD:11030 OMA:PEVWGPY
GeneTree:ENSGT00500000044861 EMBL:AAEX03010423 EMBL:AAEX03010424
RefSeq:XP_532815.3 ProteinModelPortal:E2R5F7 PRIDE:E2R5F7
Ensembl:ENSCAFT00000010500 GeneID:475599 KEGG:cfa:475599
NextBio:20851407 Uniprot:E2R5F7
Length = 219
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|B4E3T4 [details] [associations]
symbol:RBPMS "HCG2043421, isoform CRA_c" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CH471080 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000017369 HOVERGEN:HBG069897 UniGene:Hs.334587
HGNC:HGNC:19097 ChiTaRS:RBPMS EMBL:AC102945 EMBL:AC011204
EMBL:AC109329 EMBL:AK304858 IPI:IPI00908913 SMR:B4E3T4
STRING:B4E3T4 Ensembl:ENST00000517860 UCSC:uc011lba.1
Uniprot:B4E3T4
Length = 224
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|F5H357 [details] [associations]
symbol:RBPMS "RNA-binding protein with multiple-splicing"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00414709 HGNC:HGNC:19097 ChiTaRS:RBPMS EMBL:AC102945
EMBL:AC011204 EMBL:AC109329 ProteinModelPortal:F5H357 SMR:F5H357
PRIDE:F5H357 Ensembl:ENST00000538486 ArrayExpress:F5H357
Bgee:F5H357 Uniprot:F5H357
Length = 153
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|Q93062 [details] [associations]
symbol:RBPMS "RNA-binding protein with multiple splicing"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=IDA]
[GO:0060391 "positive regulation of SMAD protein import into
nucleus" evidence=IDA] [GO:0008143 "poly(A) RNA binding"
evidence=IDA] [GO:0006396 "RNA processing" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
EMBL:CH471080 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0006396 GO:GO:0003713 GO:GO:0010862 GO:GO:0060391
GO:GO:0008143 HOGENOM:HOG000017369 HOVERGEN:HBG069897 EMBL:D84110
EMBL:D84107 EMBL:D84108 EMBL:D84109 EMBL:D84111 EMBL:BC003608
IPI:IPI00004045 IPI:IPI00101800 IPI:IPI00216935 IPI:IPI00216936
IPI:IPI00414709 PIR:JC6127 RefSeq:NP_001008710.1
RefSeq:NP_001008711.1 RefSeq:NP_001008712.1 RefSeq:NP_006858.1
UniGene:Hs.334587 PDB:1BNY PDBsum:1BNY ProteinModelPortal:Q93062
SMR:Q93062 IntAct:Q93062 MINT:MINT-1434067 STRING:Q93062
DMDM:13124469 PaxDb:Q93062 PRIDE:Q93062 Ensembl:ENST00000287771
Ensembl:ENST00000320203 Ensembl:ENST00000339877
Ensembl:ENST00000397323 GeneID:11030 KEGG:hsa:11030 UCSC:uc003xib.3
UCSC:uc003xic.1 UCSC:uc003xid.1 CTD:11030 GeneCards:GC08P030242
HGNC:HGNC:19097 MIM:601558 neXtProt:NX_Q93062 PharmGKB:PA134985584
eggNOG:NOG292253 OMA:PEVWGPY OrthoDB:EOG4NGGNV ChiTaRS:RBPMS
GenomeRNAi:11030 NextBio:41912 ArrayExpress:Q93062 Bgee:Q93062
CleanEx:HS_RBPMS Genevestigator:Q93062 GermOnline:ENSG00000157110
Uniprot:Q93062
Length = 196
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|F1RX64 [details] [associations]
symbol:RBPMS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060391 "positive regulation of SMAD protein import
into nucleus" evidence=IEA] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003713 GO:GO:0010862
GO:GO:0060391 GO:GO:0008143 OMA:PEVWGPY
GeneTree:ENSGT00500000044861 EMBL:CU914373 EMBL:FP236445
Ensembl:ENSSSCT00000017254 Uniprot:F1RX64
Length = 215
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>MGI|MGI:1334446 [details] [associations]
symbol:Rbpms "RNA binding protein gene with multiple
splicing" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=ISO]
[GO:0010862 "positive regulation of pathway-restricted SMAD protein
phosphorylation" evidence=ISO] [GO:0060391 "positive regulation of
SMAD protein import into nucleus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1334446 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003713
GO:GO:0010862 GO:GO:0060391 GO:GO:0008143 HOGENOM:HOG000017369
HOVERGEN:HBG069897 CTD:11030 eggNOG:NOG292253 OrthoDB:EOG4NGGNV
ChiTaRS:RBPMS EMBL:AF148511 EMBL:AK012265 EMBL:AK012586
EMBL:AK041118 EMBL:AC123616 EMBL:AC127551 EMBL:AC162523
EMBL:BC030397 IPI:IPI00122127 IPI:IPI00125806 IPI:IPI00132006
RefSeq:NP_001036139.1 RefSeq:NP_001036140.1 RefSeq:NP_062707.1
UniGene:Mm.323997 ProteinModelPortal:Q9WVB0 SMR:Q9WVB0
STRING:Q9WVB0 PaxDb:Q9WVB0 PRIDE:Q9WVB0 Ensembl:ENSMUST00000033994
Ensembl:ENSMUST00000033995 Ensembl:ENSMUST00000053251 GeneID:19663
KEGG:mmu:19663 NextBio:296958 CleanEx:MM_RBPMS
Genevestigator:Q9WVB0 GermOnline:ENSMUSG00000031586 Uniprot:Q9WVB0
Length = 197
Score = 165 (63.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/91 (41%), Positives = 56/91 (61%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>UNIPROTKB|F1NAP9 [details] [associations]
symbol:RBPMS "RNA-binding protein with multiple-splicing"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0010862 "positive regulation of pathway-restricted SMAD protein
phosphorylation" evidence=IEA] [GO:0060391 "positive regulation of
SMAD protein import into nucleus" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003713 GO:GO:0010862
GO:GO:0060391 GO:GO:0008143 OMA:PEVWGPY
GeneTree:ENSGT00500000044861 EMBL:AADN02016141 IPI:IPI00588016
Ensembl:ENSGALT00000016744 Uniprot:F1NAP9
Length = 196
Score = 163 (62.4 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 22 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 79
Query: 127 ALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 80 ALNGIRFDPEIPQTLRLEFAKANTKMAKSK 109
>RGD|1561067 [details] [associations]
symbol:Rbpms "RNA binding protein with multiple splicing"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0008143 "poly(A) RNA binding"
evidence=IEA;ISO] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=IEA;ISO]
[GO:0060391 "positive regulation of SMAD protein import into
nucleus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1561067
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00500000044861 IPI:IPI00959368
Ensembl:ENSRNOT00000068011 Uniprot:F2Z3S5
Length = 110
Score = 158 (60.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>UNIPROTKB|F1M7J8 [details] [associations]
symbol:Rbpms "Protein Rbpms" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1561067 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00500000044861 IPI:IPI00767399
Ensembl:ENSRNOT00000046138 ArrayExpress:F1M7J8 Uniprot:F1M7J8
Length = 175
Score = 158 (60.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>UNIPROTKB|F1M9Y9 [details] [associations]
symbol:Rbpms "Protein Rbpms" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0010862
"positive regulation of pathway-restricted SMAD protein
phosphorylation" evidence=IEA] [GO:0060391 "positive regulation of
SMAD protein import into nucleus" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1561067 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003713
GO:GO:0010862 GO:GO:0060391 GO:GO:0008143
GeneTree:ENSGT00500000044861 IPI:IPI00364663
Ensembl:ENSRNOT00000017883 ArrayExpress:F1M9Y9 Uniprot:F1M9Y9
Length = 198
Score = 158 (60.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>UNIPROTKB|H0YBU9 [details] [associations]
symbol:RBPMS "RNA-binding protein with multiple-splicing"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:19097 ChiTaRS:RBPMS EMBL:AC102945 EMBL:AC011204
EMBL:AC109329 Ensembl:ENST00000519359 Uniprot:H0YBU9
Length = 119
Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A ALN
Sbjct: 2 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNALNG 59
Query: 131 -------GSTLYIDLAKSNSRSKRSR 149
TL ++ AK+N++ +++
Sbjct: 60 IRFDPEIPQTLRLEFAKANTKMAKNK 85
>POMBASE|SPCC320.07c [details] [associations]
symbol:mde7 "RNA-binding protein Mde7" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126 "meiosis"
evidence=IEP] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPCC320.07c GO:GO:0007126 GO:GO:0005737
GO:GO:0008380 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG12793
PIR:T41304 RefSeq:NP_587722.1 ProteinModelPortal:O59784
EnsemblFungi:SPCC320.07c.1 GeneID:2538704 KEGG:spo:SPCC320.07c
OrthoDB:EOG42592X NextBio:20799889 Uniprot:O59784
Length = 761
Score = 89 (36.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 229 TPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTC 280
+PC T++V NL E++L FSK G+ +L + P+ FV+F+ C
Sbjct: 599 SPCNTIYVGNLSNPDQEKKLRLAFSKEKGYRRLCFKIKGNSPMCFVEFEEVC 650
Score = 83 (34.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 53 GSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAF 112
GS S S + + V GLP+D RE+ +F GY+ S + S +N A
Sbjct: 204 GSNSLSEASNDDLESSIIQIVGGLPDDFDDRELSGIFTFCEGYDFSKIES--ENGHRKAI 261
Query: 113 AVFSDQQSALGAMYALNKGST 133
F + +AL A LN ST
Sbjct: 262 VYFRNAIAALKAKNMLNASST 282
>DICTYBASE|DDB_G0268988 [details] [associations]
symbol:DDB_G0268988 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0268988 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000004 eggNOG:NOG255497 RefSeq:XP_646953.2
ProteinModelPortal:Q55ER7 EnsemblProtists:DDB0233676 GeneID:8616643
KEGG:ddi:DDB_G0268988 OMA:EFATMAM Uniprot:Q55ER7
Length = 356
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 146 KRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVHM-PGMGNSAF--NTIGYPHTQSHEN 202
KR R++D + S + S +S ++D S P +S++ T P + S+ +
Sbjct: 182 KRIRSEDYYPRSSSSSSSSSLYS--SSDRYHDSYRSTPSSSSSSYLIPTSSIPLSSSNYH 239
Query: 203 FDARGGSLITTAKFNNSSA--PSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGF 258
SL +++ ++ SA P + T PC+TLFV+NL TE+EL+ +F GF
Sbjct: 240 LPPSSTSL-SSSHYHGGSALPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGF 298
Query: 259 LKLKIQSTYGP-PVAFVDFQVTCVCVCHILFSLLFKEKLSDGISSN 303
+ +++ + G P+ F DF T + + F F+ SD ISS+
Sbjct: 299 VGIRLINKEGKLPMCFCDFIDTQSSMFALEFLQGFRMDASD-ISSS 343
>POMBASE|SPCC16C4.07 [details] [associations]
symbol:scw1 "RNA-binding protein Scw1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0032955 "regulation of
barrier septum assembly" evidence=IGI] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
PomBase:SPCC16C4.07 GO:GO:0005737 GO:GO:0032995 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0032955 OrthoDB:EOG42592X PIR:T41097
RefSeq:NP_587917.1 ProteinModelPortal:O74452 STRING:O74452
EnsemblFungi:SPCC16C4.07.1 GeneID:2539358 KEGG:spo:SPCC16C4.07
eggNOG:NOG255497 NextBio:20800523 Uniprot:O74452
Length = 561
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 217 NNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
N + A P PC T++V NL P+ +E+EL +FS G+ +L ++ P+ FV+F
Sbjct: 415 NTNPADQNP----PCNTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEF 470
Query: 277 Q 277
+
Sbjct: 471 E 471
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/112 (27%), Positives = 46/112 (41%)
Query: 53 GSYSASFPAYG-SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS-STQNSQPF 110
G +++ P G + L + LP D+ PRE F S L S N
Sbjct: 93 GGLASAPPKVGFGFPRYYALRIEDLPRDLTPREFLCTFLFATNVVSVELNPVSVDNEVAH 152
Query: 111 AFAVFSDQQSALGAMYALNKGSTLY--IDLAKSNSRSKRSRTD--DEWTGSD 158
AVFS + +A A L S +Y + ++ K S+T+ DE GS+
Sbjct: 153 GLAVFSSRDAAASARDTL-LSSDVYSACSMIILDNYRKGSQTNLSDETEGSE 203
>ASPGD|ASPL0000063387 [details] [associations]
symbol:AN7700 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:BN001304 EMBL:AACD01000130
OrthoDB:EOG42592X eggNOG:NOG255497 RefSeq:XP_680969.1
ProteinModelPortal:Q5AVI0 EnsemblFungi:CADANIAT00000831
GeneID:2869448 KEGG:ani:AN7700.2 HOGENOM:HOG000174215 OMA:NSVKGGI
Uniprot:Q5AVI0
Length = 628
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 168 SRGTADLGI---GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSG 224
S G+A + I S + P M N A G+P+ H TA+ + +A
Sbjct: 360 SGGSAHMAIPTPSSAYTPPM-NGAVGNPGFPYNSQH------------TARHSFPAANPN 406
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCVCVC 284
N PC TL+V NL P E+EL +FSK G+ +L ++ P+ FV+F+ V
Sbjct: 407 DMN-PPCNTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFED--VRTA 463
Query: 285 HILFSLLFKEKLSDGISS 302
+ L+ KLS+ I +
Sbjct: 464 GKTLNELYGYKLSNSIKT 481
>WB|WBGene00017929 [details] [associations]
symbol:grld-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012921
Pfam:PF07744 EMBL:FO080227 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912
GeneTree:ENSGT00530000063730 RefSeq:NP_741283.1
ProteinModelPortal:H2KYB8 SMR:H2KYB8 PRIDE:H2KYB8
EnsemblMetazoa:F29C4.7a.1 EnsemblMetazoa:F29C4.7a.2 GeneID:176827
KEGG:cel:CELE_F29C4.7 CTD:176827 WormBase:F29C4.7a OMA:ERNDCAR
Uniprot:H2KYB8
Length = 520
Score = 96 (38.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 66 DEV-RTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
DE RTLFV +P DVK REI ++F E E +++ +AF +F A+ A
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Score = 63 (27.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT 279
LFV LG C ++ L + F + GF++ I +G P A+V ++ T
Sbjct: 253 LFVGGLGSWCDKEILQKAFGEF-GFVE-NIDYDHGQPYAYVVYENT 296
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 288 0.00087 115 3 11 22 0.38 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 614 (65 KB)
Total size of DFA: 227 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.53u 0.08s 24.61t Elapsed: 00:00:01
Total cpu time: 24.54u 0.08s 24.62t Elapsed: 00:00:01
Start: Fri May 10 01:18:06 2013 End: Fri May 10 01:18:07 2013