BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020632
(323 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/256 (67%), Positives = 198/256 (77%), Gaps = 12/256 (4%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S DEVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS +QNSQPFAFAVF DQQSA+
Sbjct: 76 SVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIA 135
Query: 124 AMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
AM+ALN KGSTLYIDLAKSNSRSKRSR DDE G DKK +G + FSR D G+
Sbjct: 136 AMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGFSR-PPDSGV 194
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
GSVHMPGMGNSA++ IGYP TQSH NFD R + T AK NNSSAP P+N TPC TLFV
Sbjct: 195 GSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNE-TPAKLNNSSAPYFPQNATPCPTLFV 253
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT-CV--CVCHILFSLLFK 293
ANLGPTC+EQEL +FS+CPGFLKLK+QSTYG PVAFVDFQ T C + H+ ++L+
Sbjct: 254 ANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGTVLYS 313
Query: 294 EKLSDGISSNWDQWRL 309
+G+ + + R+
Sbjct: 314 SPAGEGMRIEYAKSRM 329
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/256 (67%), Positives = 198/256 (77%), Gaps = 12/256 (4%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S DEVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS +QNSQPFAFAVF DQQSA+
Sbjct: 73 SVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIA 132
Query: 124 AMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
AM+ALN KGSTLYIDLAKSNSRSKRSR DDE G DKK +G + FSR D G+
Sbjct: 133 AMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGFSR-PPDSGV 191
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
GSVHMPGMGNSA++ IGYP TQSH NFD R + T AK NNSSAP P+N TPC TLFV
Sbjct: 192 GSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNE-TPAKLNNSSAPYFPQNATPCPTLFV 250
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT-CV--CVCHILFSLLFK 293
ANLGPTC+EQEL +FS+CPGFLKLK+QSTYG PVAFVDFQ T C + H+ ++L+
Sbjct: 251 ANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGTVLYS 310
Query: 294 EKLSDGISSNWDQWRL 309
+G+ + + R+
Sbjct: 311 SPAGEGMRIEYAKSRM 326
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/221 (75%), Positives = 182/221 (82%), Gaps = 9/221 (4%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S DEVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRS +QNSQPFAFAVF DQQSA+
Sbjct: 73 SVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIA 132
Query: 124 AMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
M+ALN KGSTLYIDLAKSNSRSKRSR DDE G DKK +G + FSR D G+
Sbjct: 133 TMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGFSR-PPDSGV 191
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
GSVHMPGMGNSA++ IGYP TQSH NFD R + T AK NNSSAP P+NVTPC TLFV
Sbjct: 192 GSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALN-ETPAKLNNSSAPYFPQNVTPCPTLFV 250
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
ANLGPTC+EQEL +FS+CPGFLKLK+QSTYG PVAFVDFQ
Sbjct: 251 ANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQ 291
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/263 (61%), Positives = 192/263 (73%), Gaps = 17/263 (6%)
Query: 57 ASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFS 116
S PAY +D+VRTLFVAGLP+D+KPRE+YNLFREFPGYESSHLR+ +QNSQPFAFA F+
Sbjct: 61 VSVPAYVPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTPSQNSQPFAFATFT 120
Query: 117 DQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSR 169
DQ SA+ AM+ALN KGSTLYIDLAKSNSRSKRSRTDDEW+ DKKAR S FS
Sbjct: 121 DQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWSSLDKKARVSSGFSM 180
Query: 170 GTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT 229
GT D G GSVH+PGM NSAFNTIG+P QS + D R + + NNSSAP
Sbjct: 181 GTPDSGFGSVHLPGMANSAFNTIGFPSAQSPGSIDDRSRNESKAGRMNNSSAP------- 233
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCV---CVCHI 286
PC TLFVANLG CTE+EL QVFS+CPGFLKLK+QSTYG PVAFVDFQ T + H+
Sbjct: 234 PCPTLFVANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTASSTGALNHL 293
Query: 287 LFSLLFKEKLSDGISSNWDQWRL 309
++L+ +G+ + + R+
Sbjct: 294 QGTVLYSSVAGEGLRLEYAKSRM 316
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 184/259 (71%), Gaps = 17/259 (6%)
Query: 52 LGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFA 111
+Y+ + Y +D VRTLFVAGLPEDV PREIYNLFREFPGYESSHLR+ TQ SQPFA
Sbjct: 58 FATYAPPYVPYAGHDLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRTPTQTSQPFA 117
Query: 112 FAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGP 164
FA F+DQ SA+ AM+ALN KGSTLYIDLAKSNSRSKRSRT DEW G DKKA+
Sbjct: 118 FATFADQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTADEWPGLDKKAKAS 177
Query: 165 SAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSG 224
A + D G GSVH+PGMGNSA+N IGYP QSH FD+R + + NNSSAP
Sbjct: 178 PAIPQSNFDSGFGSVHLPGMGNSAYNMIGYPPAQSHGTFDSRAKTETKSINSNNSSAP-- 235
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCV--- 281
PC TLFVANLGP CTEQELTQ+FS+ GFLKLK+QSTYG PVAFVDFQ T
Sbjct: 236 -----PCPTLFVANLGPNCTEQELTQLFSRFAGFLKLKMQSTYGAPVAFVDFQDTACSTG 290
Query: 282 CVCHILFSLLFKEKLSDGI 300
+ H+ ++L+ +G+
Sbjct: 291 ALNHLQGTVLYSSTSGEGM 309
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/251 (65%), Positives = 182/251 (72%), Gaps = 22/251 (8%)
Query: 40 PYMPQPQPQPPPLGSYSASFPAYG----SYDEVRTLFVAGLPEDVKPREIYNLFREFPGY 95
PY+ Q Q Q A F +YG S EVRTLFVAGLPEDVKPREIYNLFREFPGY
Sbjct: 54 PYVAQHQQQ--------AVFGSYGAPQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGY 105
Query: 96 ESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRS 148
ESSHLRS + +SQPFAFAVF+ Q+SA+ AM+ALN KGSTLYIDLAKSNSRSKR+
Sbjct: 106 ESSHLRSPSNSSQPFAFAVFASQKSAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRT 165
Query: 149 RTDDEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAF--NTIGYPHTQSHENFDAR 206
R DDE G+DKKARG + S T D G+GS+HMPGMGN AF NT GYP QS N D
Sbjct: 166 RIDDERVGADKKARGLTP-SWSTPDSGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGS 224
Query: 207 GGSLITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQST 266
S A SS P P+N TPCATLFVANLGP+C EQEL QVFS+ PGFLKLK+QST
Sbjct: 225 AMSDSLFANLKKSSTPYIPQNSTPCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQST 284
Query: 267 YGPPVAFVDFQ 277
YG PVAFVDFQ
Sbjct: 285 YGAPVAFVDFQ 295
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 190/283 (67%), Gaps = 17/283 (6%)
Query: 43 PQPQPQPPPLGSYSASFPAYG----SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESS 98
P P + + A F +YG S EVRTLFVAGLPEDVKPREIYNLFREFP YESS
Sbjct: 43 PAHHVHPSYMAQHQAVFASYGVSQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESS 102
Query: 99 HLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTD 151
HLRS + +SQPFAFAVF+ QQSA+ A +ALN KGS LYIDLAKSNSRSKR+R D
Sbjct: 103 HLRSPSNSSQPFAFAVFASQQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRID 162
Query: 152 DEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAFNT--IGYPHTQSHENFDARGGS 209
DE G+DKKARG + S T D G+GS+HMPGMGN AFNT GYP QS N D S
Sbjct: 163 DERAGADKKARGLTP-SWATPDSGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMS 221
Query: 210 LITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGP 269
A SS P P+N TPCATLFVANLG +C EQEL QVFS+ PGFLKLK+QSTYG
Sbjct: 222 GGLFANLKKSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGA 281
Query: 270 PVAFVDFQ---VTCVCVCHILFSLLFKEKLSDGISSNWDQWRL 309
PVAFVDFQ + + + ++L + +G+ + + R+
Sbjct: 282 PVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRM 324
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/282 (56%), Positives = 190/282 (67%), Gaps = 20/282 (7%)
Query: 41 YMPQPQPQPPPLGSYSASFPA-YGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSH 99
Y+PQ Q Y + P+ S ++VRTLF+AGLPEDVKPREIYNLFREFPGYESSH
Sbjct: 59 YIPQQQQ------VYDSYVPSPLASTNDVRTLFIAGLPEDVKPREIYNLFREFPGYESSH 112
Query: 100 LRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDD 152
LRS +SQ FAFAVFS+QQSA+ A++ALN KGSTLYIDLAKSNSR+KR+R DD
Sbjct: 113 LRSPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDD 172
Query: 153 EWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAFNT--IGYPHTQSHENFDARGGSL 210
+ SDKKARG SA S T D G+ S+HMPGMGN AFNT IGYP QSH D
Sbjct: 173 DRASSDKKARG-SASSWPTPDSGVSSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHD 231
Query: 211 ITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPP 270
S P P N TPCATLFVANLGP+C EQEL QVFS+ PGFLKLK+QSTYG P
Sbjct: 232 GLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAP 291
Query: 271 VAFVDFQ---VTCVCVCHILFSLLFKEKLSDGISSNWDQWRL 309
V+FVDF+ V + + ++L+ +G+ + + R+
Sbjct: 292 VSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKSRM 333
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/321 (54%), Positives = 211/321 (65%), Gaps = 38/321 (11%)
Query: 1 MAEYYP------PPAGLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGS 54
M YYP P+GL +Y PPP APP+Q Y+ Q P S
Sbjct: 4 MTSYYPPPQPPPQPSGLEPPHYPYYQVPPP--------PSAPPSQHYLSQ---HPSTFAS 52
Query: 55 YSA-SFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFA 113
Y+ P S +EVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLR+ TQ +QPFAFA
Sbjct: 53 YALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFA 112
Query: 114 VFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSA 166
VFSDQQSA+GAM+A+N K S LY+DLAKSNSRSKR+RT++E GSDKKA+ S
Sbjct: 113 VFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAK-VSI 171
Query: 167 FSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPK 226
R T D G+GS HM GMGNSA+NTIGYP QSH +FD + N++ A + P+
Sbjct: 172 IPRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNK--------TVNDTVAANIPQ 223
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCV---CV 283
N PC TLFVANLGP CTEQEL Q+F +CPGFLKLK+QSTYG PVAFVDFQ T +
Sbjct: 224 N-PPCPTLFVANLGPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL 282
Query: 284 CHILFSLLFKEKLSDGISSNW 304
H+ S+L+ +G+ +
Sbjct: 283 NHLQGSILYSSPPGEGMRLEY 303
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 183/253 (72%), Gaps = 17/253 (6%)
Query: 58 SFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSD 117
S+ + +D VRTLFVAGLP+DVKPREIYNLFREFPGYESSHLRS TQ SQPFAFA F D
Sbjct: 65 SYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPFAFATFID 124
Query: 118 QQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRG 170
Q SA+ AM+ALN KGSTLYIDLAKSNSRSKRSR+DDEW+G DK+ + A G
Sbjct: 125 QPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSGLDKRVKASPATPGG 184
Query: 171 TADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTP 230
+ D G GSVH+PGM NSA+N IGY QSH FD+R S T A +NSSAP P
Sbjct: 185 SLDSGFGSVHLPGMSNSAYNMIGYTSPQSHGIFDSRAASEPTGANSSNSSAP-------P 237
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCV---CVCHIL 287
C TLFVANLGP C EQEL QVFS+CPGFLKLK+QSTYG PVAFVDFQ T + H+
Sbjct: 238 CPTLFVANLGPNCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTSCSTGALNHLQ 297
Query: 288 FSLLFKEKLSDGI 300
++L+ DG+
Sbjct: 298 GTILYSSPAGDGM 310
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/250 (58%), Positives = 168/250 (67%), Gaps = 27/250 (10%)
Query: 43 PQPQPQPPPLGSYSASF----PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESS 98
PQP P P+ S + F + G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+S
Sbjct: 18 PQPGVAPIPITSAHSVFLPTHVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETS 77
Query: 99 HLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTD 151
HLRSS ++PFAFAVFSD QSA+ M+ALN K STL+IDLAKSN +SKRSRTD
Sbjct: 78 HLRSS-DGAKPFAFAVFSDLQSAVTVMHALNGMVFDLEKYSTLHIDLAKSNPKSKRSRTD 136
Query: 152 DEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLI 211
D W + + P +S T + G GS H PGM +S +NTIGY QS + G +
Sbjct: 137 DGW----ESLKKPKPWST-TTESGFGSFHTPGMSSSTYNTIGYSPAQSQGIANVAGRAPT 191
Query: 212 TTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPV 271
T NSS K PC TLF+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PV
Sbjct: 192 T----GNSS-----KAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 242
Query: 272 AFVDFQ-VTC 280
AFVDFQ V+C
Sbjct: 243 AFVDFQDVSC 252
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 157/228 (68%), Gaps = 23/228 (10%)
Query: 61 AYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQS 120
+ G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QS
Sbjct: 27 SIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQS 85
Query: 121 ALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD 173
A+ M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + + T +
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT----TTE 140
Query: 174 LGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCAT 233
G GS PGM +SA+NTIGY QS G + S PS K PC T
Sbjct: 141 SGFGSFQTPGMSSSAYNTIGYSPAQSQ-------GIANVAGRAPTSRKPS--KAADPCPT 191
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
LF+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 192 LFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 239
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 156/226 (69%), Gaps = 23/226 (10%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QSA+
Sbjct: 44 GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQSAV 102
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLG 175
M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + + T + G
Sbjct: 103 AVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT----TTESG 157
Query: 176 IGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLF 235
GS PGM +SA+NTIGY QS G + S PS K PC TLF
Sbjct: 158 FGSFQTPGMSSSAYNTIGYSPAQSQ-------GIANVAGRAPTSRKPS--KAADPCPTLF 208
Query: 236 VANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 209 IANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 254
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 156/226 (69%), Gaps = 23/226 (10%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QSA+
Sbjct: 44 GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQSAV 102
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLG 175
M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + + T + G
Sbjct: 103 AVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT----TTESG 157
Query: 176 IGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLF 235
GS PGM +SA+NTIGY QS G + S PS K PC TLF
Sbjct: 158 FGSFQTPGMSSSAYNTIGYSPAQSQ-------GIANVAGRAPTSRKPS--KAADPCPTLF 208
Query: 236 VANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 209 IANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 254
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 158/228 (69%), Gaps = 23/228 (10%)
Query: 61 AYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQS 120
+ G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QS
Sbjct: 27 SIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQS 85
Query: 121 ALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD 173
A+ M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + + T +
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT----TTE 140
Query: 174 LGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCAT 233
G GS PGM +SA+NTIGY QS + G + S PS K PC T
Sbjct: 141 SGFGSFQTPGMSSSAYNTIGYSPAQSQGIANVAG-------RAPTSRKPS--KAADPCPT 191
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
LF+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 192 LFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 239
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 157/226 (69%), Gaps = 23/226 (10%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QSA+
Sbjct: 44 GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQSAV 102
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLG 175
M+ALN K STL+IDLAKSN +SKRSRTDD W S KK + + T + G
Sbjct: 103 AVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE-SLKKLKSWNT----TTESG 157
Query: 176 IGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLF 235
GS PGM +SA+NTIGY QS + G + S PS K PC TLF
Sbjct: 158 FGSFQTPGMSSSAYNTIGYSPAQSQGIANVAG-------RAPTSRKPS--KAADPCPTLF 208
Query: 236 VANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
+AN+GP CTE EL QVFS+C GFLKLKIQ TYG PVAFVDFQ V+C
Sbjct: 209 IANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSC 254
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/226 (59%), Positives = 162/226 (71%), Gaps = 17/226 (7%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRTLF+AGLP+DVK REIYNLFREFPGY S LR+S +Q +AF VF+DQQSAL AM
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSEGGTQVYAFTVFTDQQSALAAM 139
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTG-SDKKARGPSAFSRGTADLGI- 176
+ALN + LYIDLAKSNSRSKRSRTDD + SDK+ RGP++ D G+
Sbjct: 140 HALNGMDFDPETRAVLYIDLAKSNSRSKRSRTDDGGSNSSDKRIRGPNSVPGVYPDAGVG 199
Query: 177 GSVHMPGMGNSAF-NTIGYPHTQSHENFDAR----GGSLITTAKFNNSSAPSGPKNVTPC 231
G+VHMPGM NS + +T G+P TQS +A G +TT + S+AP+ P + PC
Sbjct: 200 GTVHMPGMANSGYSDTSGFPSTQSGGMMEASIFQDGVPGLTTGQ---STAPTQPASNPPC 256
Query: 232 ATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
TLFVANLGPTC+E+ELTQVFS+CPGFLKLK+Q PVAFVDFQ
Sbjct: 257 PTLFVANLGPTCSEEELTQVFSRCPGFLKLKMQIIGELPVAFVDFQ 302
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 155/221 (70%), Gaps = 21/221 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DE+RTLF+AGLP D K RE+YNLFR+FPGY SSHLR+S ++SQ +AFAVF+DQ SAL AM
Sbjct: 66 DELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAM 125
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWT-GSDKKARGPSAFSRGTADLGIG 177
A N TL++DLAKSNSRSKRSRTDD + S+KKAR P RG D G G
Sbjct: 126 SATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKARNP----RGFPDSGAG 181
Query: 178 S-VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
S +HM GMGNS+ + GYP QS+ NF+ A F+ + P+N PC TLFV
Sbjct: 182 SNIHMSGMGNSSHSLNGYPSAQSYTNFE--------PAAFSKDPSAFAPQNNPPCPTLFV 233
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
ANLGPTC+EQEL VFS C GF+K+K+Q+ +G PVAFVDF+
Sbjct: 234 ANLGPTCSEQELIDVFSSCAGFIKVKMQNKFGAPVAFVDFK 274
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 155/221 (70%), Gaps = 21/221 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DE+RTLF+AGLP D K RE+YNLFR+FPGY SSHLR+S ++SQ +AFAVF+DQ SAL AM
Sbjct: 66 DELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAM 125
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWT-GSDKKARGPSAFSRGTADLGIG 177
A N TL++DLAKSNSRSKRSRTDD + S+KKAR P RG D G G
Sbjct: 126 SATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKARNP----RGFPDSGAG 181
Query: 178 S-VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
S +HM GMGNS+ + GYP QS+ NF+ A F+ + P+N PC TLFV
Sbjct: 182 SNIHMSGMGNSSHSLNGYPSAQSYTNFE--------PAAFSKDPSAFAPQNNPPCPTLFV 233
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
ANLGPTC+EQEL VFS C GF+K+K+Q+ +G PVAFVDF+
Sbjct: 234 ANLGPTCSEQELIDVFSSCAGFIKVKMQNKFGAPVAFVDFK 274
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 166/258 (64%), Gaps = 23/258 (8%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL--- 122
DE+RTLF+AGLP D KPRE+YNLFR+FPGY SSHLR+ ++SQ +AFAVF+DQQSAL
Sbjct: 59 DELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTG-KSSQAYAFAVFADQQSALTAL 117
Query: 123 ----GAMYALNKGSTLYIDLAKSNSRSKRSRTDDEWTGS-DKKARGPSAFSRGTADLGIG 177
G ++ L K +L++DLAKSNSRSKR R+DD S +K+ R P RG D G G
Sbjct: 118 SGTNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRTRKP----RGFPDSGAG 173
Query: 178 S-VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
S +++ GMG+S+ + GYP QS+ SL ++A + + P+ PC TLFV
Sbjct: 174 SNIYISGMGSSSHSLSGYPSAQSYT-------SLESSASLSKDPSTFAPQINPPCPTLFV 226
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLLFKE 294
ANLGP C+EQEL VFS C GF+KLK+Q+ G PVAFVDF+ ++ + L ++
Sbjct: 227 ANLGPACSEQELIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDSISSTEAINRLQGVILYS 286
Query: 295 KLSDGISSNWDQWRLRSW 312
L +G+ + + R+ W
Sbjct: 287 SLGEGMRLEYAKSRMGLW 304
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 164/255 (64%), Gaps = 23/255 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRTLF+AGLP D KPRE+YNLFR+FPGY SSHLR+ ++SQ +AFAVF+DQQSAL A+
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTG-KSSQAYAFAVFADQQSALAAL 113
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGS-DKKARGPSAFSRGTADLGIG 177
A N K +L++DLAKSNSRSKR R+DD S +K+ R P RG D G G
Sbjct: 114 SATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNRKP----RGFPDSGAG 169
Query: 178 S-VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
S +++ GMG+++ + GYP QS+ SL ++A + + P+N PC TLFV
Sbjct: 170 SNIYISGMGSTSHSLSGYPSAQSYT-------SLESSASLSKDPSTFAPQNNPPCPTLFV 222
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLLFKE 294
ANL P C+EQ+L VFS C GF+KLK+Q+ G PVAFVDF+ ++ + L ++
Sbjct: 223 ANLAPACSEQQLIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDAISSTEAINRLQGVILYS 282
Query: 295 KLSDGISSNWDQWRL 309
+G+ + + R+
Sbjct: 283 SSGEGMRLEYAKSRM 297
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 172/291 (59%), Gaps = 37/291 (12%)
Query: 4 YYPPPAGLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASF---- 59
Y PPP Y T PPPPP G + T PP +Y F
Sbjct: 6 YNPPPPRAASSSYATLPPPPP-------GTSSYDTYRQHEHAYLAAPPPPAYGGYFDRAE 58
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P DE+RTLF+AGLP DVKPRE+YNLFR+FPGY SSH+RS +++Q +AFAVF DQ
Sbjct: 59 PLAPPRDELRTLFIAGLPADVKPREVYNLFRDFPGYVSSHVRSG-KSAQSYAFAVFGDQP 117
Query: 120 SALGAMYALN-------KGSTLYIDLAKSNSR---SKRSRTDDEW--TGSDKKARGPSAF 167
SAL A+ A N K ++++DLAKSNSR SKR R+D E + KKAR P
Sbjct: 118 SALAAVSATNGLVFDLEKNCSIHVDLAKSNSRSTSSKRPRSDYEDFPKSTGKKARSP--- 174
Query: 168 SRGTADLGIGS-VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPK 226
RG D G GS HM GMGNS+ + GYP QS+ +F ++A F+ + P+
Sbjct: 175 -RGRPDSGAGSNNHMSGMGNSSHSLNGYP-AQSYTDFG-------SSAAFSKDPSMFAPQ 225
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
N PC TLFVANLG T +E+ELT VFS C GF+KLK+Q+ +G PVAFVDF+
Sbjct: 226 NNPPCPTLFVANLGQTVSERELTDVFSGCEGFIKLKMQNKFGAPVAFVDFK 276
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 13/144 (9%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRTLFVAGLPEDVKPREI NLFREFPGYE+SHLRSS ++PFAFAVFSD QSA+
Sbjct: 29 GARDEVRTLFVAGLPEDVKPREIXNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQSAV 87
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLG 175
M+ALN K STL+IDLAKSN +SKRSRTDD W K P +++ T + G
Sbjct: 88 AVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESLKK----PKSWNT-TTESG 142
Query: 176 IGSVHMPGMGNSAFNTIGYPHTQS 199
GS PGM +SA+NTIGY QS
Sbjct: 143 FGSFQTPGMSSSAYNTIGYSPAQS 166
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 140/258 (54%), Gaps = 32/258 (12%)
Query: 34 VAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFP 93
VAPP P+ P S + + VRTLF++GLPED+K REIYNLFR P
Sbjct: 4 VAPPLAPHSPLQNNNKKQTHSRHHN---NNHKERVRTLFISGLPEDIKHREIYNLFRRRP 60
Query: 94 GYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSK 146
G+E+ L+ + + Q AFAVFS Q AL A LN G+TL I+LA++NSR K
Sbjct: 61 GFEACQLKYTGRGYQIVAFAVFSHHQLALAAKDVLNGLTFDPETGATLNIELARTNSRIK 120
Query: 147 RSRTDDEWTG-SDKKARGPSAFSRGTADLGIG-SVHMPGMGNSAFNTIGYPHTQSHENFD 204
RS TDD G DK+ RGP D G+G +V MPG N ++
Sbjct: 121 RSGTDDGGNGPYDKRIRGPFGVPGVFDDDGVGETVKMPGSSNIV------------QSGG 168
Query: 205 ARGGSLITTAKFNNSSAPSGPK-----NVTPCATLFVANLGPTCTEQELTQVFSKCPGFL 259
GGSL A + +S P+ + PC TLFVANLGPTCTE EL +V S+ GF
Sbjct: 169 VVGGSL---AGEDGNSGPTKEQAPGPGGNPPCPTLFVANLGPTCTEGELREVLSRFQGFK 225
Query: 260 KLKIQSTYGPPVAFVDFQ 277
LK+Q+ G PVAFVDF+
Sbjct: 226 MLKLQTKGGMPVAFVDFE 243
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 37 PTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYE 96
P PY P P G +++ + TLFV+GLP+DVK REI+N+FR PG++
Sbjct: 8 PYDPYYQLPPAAAAPGGEWNSG---------INTLFVSGLPDDVKAREIHNIFRRRPGFD 58
Query: 97 SSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSR 149
S L+ + + +Q AFA F + QSA+ A+++LN GSTL+I+LA+SNSR KR
Sbjct: 59 SCQLKYTGRGNQVVAFATFFNHQSAIAALHSLNGVKFDPQSGSTLHIELARSNSRRKRKP 118
Query: 150 TDDEWTGSDKKARGPS-AFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGG 208
+ DK+ + PS A + D+ P M N G E
Sbjct: 119 GSGAYVVIDKRTKKPSDAHETSSDDVESDPEEDPEMNNVDTAYQGDSENAKSEAASDPDN 178
Query: 209 SLITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYG 268
+ + + +A G V PC+TLF+ANLGP CTE EL QV S+ PGF LKI++ G
Sbjct: 179 AAVAVNEIGERTAEGG---VRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLKIRAKGG 235
Query: 269 PPVAFVDFQ 277
PVAF DF+
Sbjct: 236 MPVAFADFE 244
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 132/230 (57%), Gaps = 20/230 (8%)
Query: 61 AYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQS 120
A G + TLFV+GLP+DVKPREI+NLFR PG++S L+ + + +Q AFA F + Q+
Sbjct: 13 AQGDRSGINTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQT 72
Query: 121 ALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD 173
A+ A++ALN GS L+I+LA+SNSR KR + DK+++ + ++D
Sbjct: 73 AVAALHALNGVKFDPQTGSILHIELARSNSRRKRVPGSGAYVVIDKRSKTSTNAHETSSD 132
Query: 174 LGIGSVHMPGMGNSAFNTIGYPHTQSHENF-DARGGSLITTAKFNNSSAPSGPKNVT--- 229
G P ++ P + ++++ A+ G + ++ P+ T
Sbjct: 133 DGDSESDEPAKTSN-------PDSGNNDDLVTAKSGEMAVDPDSTLTAVNEQPEKTTDAG 185
Query: 230 --PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC+TLF+ANLGPTCTE EL QV S+ PGF LK+++ G PVAF DF+
Sbjct: 186 LPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFE 235
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 92/139 (66%), Gaps = 33/139 (23%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRTLFVAGLPEDVKPREIYNLFREFPGYE+SHLRSS ++PFAFAVFSD QSA+
Sbjct: 29 GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSS-DGAKPFAFAVFSDLQSAV 87
Query: 123 GAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLG 175
M+ALN K STL+IDLAKSN +SKRSRT +
Sbjct: 88 AVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTGKYF--------------------- 126
Query: 176 IGSVHMPGMGNSAFNTIGY 194
PGM +SA+NTIGY
Sbjct: 127 ----QTPGMSSSAYNTIGY 141
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 122/219 (55%), Gaps = 16/219 (7%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+ TLFV+GLP+DVK REI+NLFR PG++S L+ + + +Q AFA F + QSA+ A++A
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVH 180
LN GS L+I+LA+SNSR KR + DK+++G +++ G
Sbjct: 80 LNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRSKGEPDLQGSSSEDGDSDPD 139
Query: 181 MPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLG 240
P +S N S E A G + + + + G C+TLF+ANLG
Sbjct: 140 EP--SDSGDNQGDLAIMTSDET--AVGSDNAVSVEQHGKGSTGG-----LCSTLFIANLG 190
Query: 241 PTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT 279
P CTE EL Q FS GF +K++S G PVAFVDF+ T
Sbjct: 191 PNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEET 229
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 125/239 (52%), Gaps = 41/239 (17%)
Query: 55 YSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAV 114
Y+ P Y + TLF++GLP+DVK REI+NLFR PG++S L+ + + +Q AFA
Sbjct: 12 YNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFAT 71
Query: 115 FSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAF 167
F + QSA+ A++ALN GS L+I+LA+SNSR K + DK+ + P A
Sbjct: 72 FYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKK-PXAN 130
Query: 168 SRGTADLGIGS-----VHMPGMGNSAF----NTIGYPHTQSHENFDARGGSLITTAKFNN 218
S+ T+ GS N A N I P+ + HE D GG
Sbjct: 131 SQETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPY-EHHEKND--GG---------- 177
Query: 219 SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC+TLF+ANLGP C E EL +V K PGF LK+++ G PVAF DF+
Sbjct: 178 -----------PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFE 225
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 123/238 (51%), Gaps = 39/238 (16%)
Query: 55 YSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAV 114
Y+ P Y + TLF++GLP+DVK REI+NLFR PG++S L+ + + +Q AFA
Sbjct: 12 YNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFAT 71
Query: 115 FSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAF 167
F + QSA+ A++ALN GS L+I+LA+SNSR K + DK+ + +
Sbjct: 72 FYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANS 131
Query: 168 SRGTADLGIGSVHMPG----MGNSAF----NTIGYPHTQSHENFDARGGSLITTAKFNNS 219
++D G P N A N I P+ + HE D GG
Sbjct: 132 QETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPY-EHHEKND--GG----------- 177
Query: 220 SAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC+TLF+ANLGP C E EL +V K PGF LK+++ G PVAF DF+
Sbjct: 178 ----------PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFE 225
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 17/219 (7%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+ TLFV+GLP+DVK REI+NLFR PG++S L+ + + +Q AFA F + Q+A+ A+++
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQAAMQALHS 79
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVH 180
LN GS L+I+LA+SNSR KR + DK+++G + ++D G
Sbjct: 80 LNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRSKGEANVQGSSSDDGESDPD 139
Query: 181 MPGMGNSAFNTIGYPHTQSHENFDARGGS--LITTAKFNNSSAPSGPKNVTPCATLFVAN 238
P S I + DA GS + A+ + + PC+TLF+AN
Sbjct: 140 EPSENGSNHGDIATAQSG-----DAVVGSDNHVPVARAQHGKGGG---DGGPCSTLFIAN 191
Query: 239 LGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
LGP CTE EL Q S GF +K++S G PVAF DF+
Sbjct: 192 LGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFE 230
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 7/93 (7%)
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P Y SYD+VR LFVAGLP+D+KP EIY+LFREFPGYESSHLRS +QNSQPFAFA F+DQ
Sbjct: 2 PTYVSYDQVRILFVAGLPDDIKPSEIYSLFREFPGYESSHLRSPSQNSQPFAFATFADQP 61
Query: 120 SALGAMYALN-------KGSTLYIDLAKSNSRS 145
SA+ AM+ALN +GSTLY DLAKSN+RS
Sbjct: 62 SAVAAMHALNGMVFDLERGSTLYTDLAKSNARS 94
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 114/220 (51%), Gaps = 15/220 (6%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+ TLFV+GLP DVK REI+NLFR G+ES L+ + + Q AFA F+ + AL AM
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVVAFATFTSHRFALAAMNE 95
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGS-- 178
LN GS L+I+LA+SNSR K + D + + S +D G
Sbjct: 96 LNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNRNKEISKSQDDQSDEGDSDPD 155
Query: 179 -VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVA 237
V PG +S + + D+ S +A + A G C+TLF+A
Sbjct: 156 EVQEPGNSDSP-----KENDTTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIA 210
Query: 238 NLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
NLGP CTE EL Q+ S+ PGF LKI++ G PVAF DF+
Sbjct: 211 NLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFE 250
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%)
Query: 62 YGSYDE---VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQ 118
Y DE + TLFV+GLP+DVK REI+NLFR PG++S L+ + + +Q AFA F +
Sbjct: 12 YQQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNH 71
Query: 119 QSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGT 171
QSA+ A++ALN GS L+I+LA+SNSR KR + DK++ G +
Sbjct: 72 QSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGEACVVIDKRSTGEPDLQGSS 131
Query: 172 ADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPC 231
+D G P +S N S E A G + + + + G C
Sbjct: 132 SDDGDSDPDEP--SDSGDNQGNIAIMTSDET--AVGSDNAVSVEQHGKGSAGG-----LC 182
Query: 232 ATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT 279
+TLF+ANLGP CTE EL Q FS GF +K++S G PVAFVDF+ T
Sbjct: 183 STLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGGMPVAFVDFEET 230
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 8/110 (7%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DE+RTLF+AGLP D K RE+YNLFR+FPGY SSHLR+S ++SQ +AFAVF+DQ SAL AM
Sbjct: 66 DELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAM 125
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWT-GSDKKARGPSAF 167
A N TL++DLAKSNSRSKRSRTDD + S+KKAR P F
Sbjct: 126 SATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKARNPRGF 175
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 119/198 (60%), Gaps = 22/198 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EV+TLF++GLP+D+K REIYNLFR F GYES L+ S + Q AFAVF+DQ +AL A
Sbjct: 13 EEVKTLFLSGLPDDIKEREIYNLFRNFEGYESCQLKFSGRGFQIVAFAVFTDQATALKAK 72
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIG- 177
LN G+ L+I+LA++NSR+KRSR+ T ++ + F G G+G
Sbjct: 73 EELNGLKFDPQTGAVLHIELARANSRTKRSRSVKTLT----ESFCGTVF--GFTLTGVGA 126
Query: 178 SVHMPGMGNSAFNTI-GYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFV 236
++HMPG+ S FN + G+P S R ++ S P C+TLF+
Sbjct: 127 TLHMPGLHPSIFNDMPGFPPPPSDFTNLRRFQGMVPLPPPAPGSNPP-------CSTLFI 179
Query: 237 ANLGPTCTEQELTQVFSK 254
ANLGP+CTE+EL+Q+ S+
Sbjct: 180 ANLGPSCTEEELSQLLSR 197
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 139/309 (44%), Gaps = 41/309 (13%)
Query: 25 PPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPRE 84
P PP G P Y P P P G V TLFVAGLP+DVKPRE
Sbjct: 10 PAAAPPLG---DPYYVYAPHPHSDPQRQG--------------VVTLFVAGLPDDVKPRE 52
Query: 85 IYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYID 137
I+NLF PG++ L + + +Q AF F Q+AL M ALN G L+I+
Sbjct: 53 IHNLFSRRPGFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLALNGTVFDPENGDCLHIE 112
Query: 138 LAKSNSRSKRSRTDDEWTGSDKKA--RGPSAFSRGTADLGIGSVHMPGMGNSAFNTIGYP 195
LAKSNSR + D + DK+ R +A + D + S G G P
Sbjct: 113 LAKSNSRRRHGGGGDVYRVIDKRVNRREVNADNEHIGDDDV-SGEDEGEGKYGEGGSDEP 171
Query: 196 HTQSHEN--------FDARGGSLITTAKFNNSSAPSGPK----NVTPCATLFVANLGPTC 243
++N D R G K S + P ++ PC+TLF+ NLG TC
Sbjct: 172 SDTENDNSSDKNELPADQRFGEPGIKQKKRQSPSNDQPDKSSVDIPPCSTLFIENLGQTC 231
Query: 244 TEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLLFKEKLSDGIS 301
TE+EL +VFSK PGF LK++ G P AF DF + + L + SDG+
Sbjct: 232 TEEELEEVFSKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGTILSSSDSDGLR 291
Query: 302 SNWDQWRLR 310
+ + ++R
Sbjct: 292 IEYARSKMR 300
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 140/320 (43%), Gaps = 65/320 (20%)
Query: 27 PPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIY 86
PPPPG P Y P P P P G V TLFVAGLP+DVKPREI+
Sbjct: 8 PPPPGD----PYYVYAPHPYPDPQRQG--------------VLTLFVAGLPDDVKPREIH 49
Query: 87 NLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLA 139
NLF PG++ L + + +Q AF F + Q+AL AM ALN G L+I+LA
Sbjct: 50 NLFSSRPGFDHCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNGTVFDPDTGDRLHIELA 109
Query: 140 KSNSRSKRSR------TDDEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNS------ 187
KS+SR + D ++ A +A G D G G
Sbjct: 110 KSSSRKRHGDGGVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGDGGSDEP 169
Query: 188 ---------------AFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCA 232
A + G P + H RG SL SS ++ PC+
Sbjct: 170 LDTENDDSDEKNELPAERSSGQPGLKQH-----RGQSLSDDQPDKLSS------DIPPCS 218
Query: 233 TLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSL 290
TLFVANLG +CTE+EL +V SK PGF LK++ G PVAF DF + L
Sbjct: 219 TLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGT 278
Query: 291 LFKEKLSDGISSNWDQWRLR 310
+ +DG+ + + ++R
Sbjct: 279 VLASSDADGLQIEYARSKMR 298
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 115/226 (50%), Gaps = 27/226 (11%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+ TLFV+GLP DVK REI+NLFR G+ES L+ + + Q AFA F+ + A+ AM
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRYGFESCQLKYTGRGDQVVAFATFTSHRFAMAAMNE 95
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGP-SAFSRGTADLGIGSV 179
LN GSTL+I+LA+SNSR K E GS GP +L
Sbjct: 96 LNGVKFDPQTGSTLHIELARSNSRRK------ERPGS-----GPYVVIDNRNKELSKSQD 144
Query: 180 HMPGMGNSAFNTIGYPHTQS--HENFDARG------GSLITTAKFNNSSAPSGPKNVTPC 231
G+S + + P EN +A+ S +A + A G C
Sbjct: 145 DQSDEGDSDPDEVQEPRNSESPKENDNAKSEADSEPDSKAPSANGHLEKAYEGGSGARAC 204
Query: 232 ATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
+TLF+ANLGP CTE EL Q+ S+ GF LKI++ G PVAF DF+
Sbjct: 205 STLFIANLGPNCTEDELRQLLSRYSGFNILKIRARGGMPVAFADFE 250
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 82/110 (74%), Gaps = 9/110 (8%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRTLF+AGLP D KPRE+YNLFR+FPGY SSHLR+ ++SQ +AFAVF+DQQSAL A+
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTG-KSSQAYAFAVFADQQSALAAL 113
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGS-DKKARGPSAF 167
A N K +L++DLAKSNSRSKR R+DD S +K+ R P F
Sbjct: 114 SATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNRKPRGF 163
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
V TLFVAGLP+DVKPREI+NLF PG++ L + + +Q AF F Q+AL M A
Sbjct: 36 VVTLFVAGLPDDVKPREIHNLFSRRPGFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLA 95
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVH 180
LN G L+I+LAKSNSR R GSD+ + + S +L
Sbjct: 96 LNGTVFDPENGDCLHIELAKSNSR----RRHGGEGGSDEPSDTENDNSSDKNELPADQSG 151
Query: 181 MPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLG 240
PG I QS N S+ ++ PC+TLF+ NLG
Sbjct: 152 EPG--------IKQKKRQSPSNDQPDKSSV----------------DIPPCSTLFIENLG 187
Query: 241 PTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLLFKEKLSD 298
TCTE+EL +VFSK PGF LK++ G P AF DF + + L + SD
Sbjct: 188 QTCTEEELEEVFSKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGTILSSSDSD 247
Query: 299 GISSNWDQWRLR 310
G+ + + ++R
Sbjct: 248 GLRIEYARSKMR 259
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 13/122 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRTLF+AGLP D KPRE+YNLFR+FPGY SSHLR+ ++SQ +AFAVF+DQQSAL A+
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTG-KSSQAYAFAVFADQQSALAAL 113
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGS-DKKARGPSAFSRGTADLGIG 177
A N K +L++DLAKSNSRSKR R+DD S +K+ R P RG D G+
Sbjct: 114 SATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNRKP----RGFPDSGMT 169
Query: 178 SV 179
V
Sbjct: 170 QV 171
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 114/238 (47%), Gaps = 33/238 (13%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQP------------------ 109
+ TLFV+GLP DVK REI+NLFR G+ES L+ + + Q
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFRKAV 95
Query: 110 FAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKAR 162
AFA F+ + AL AM LN GS L+I+LA+SNSR K + D + +
Sbjct: 96 VAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNRNK 155
Query: 163 GPSAFSRGTADLGIGS---VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNS 219
S +D G V PG +S + + D+ S +A +
Sbjct: 156 EISKSQDDQSDEGDSDPDEVQEPGNSDSP-----KENDTTKSEADSEPDSKAPSANGHLE 210
Query: 220 SAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
A G C+TLF+ANLGP CTE EL Q+ S+ PGF LKI++ G PVAF DF+
Sbjct: 211 KASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFE 268
>gi|222634965|gb|EEE65097.1| hypothetical protein OsJ_20145 [Oryza sativa Japonica Group]
Length = 315
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 140/335 (41%), Gaps = 80/335 (23%)
Query: 27 PPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIY 86
PPPPG P Y P P P P G V TLFVAGLP+DVKPREI+
Sbjct: 8 PPPPGD----PYYVYAPHPYPDPQRQG--------------VLTLFVAGLPDDVKPREIH 49
Query: 87 NLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN----------------- 129
NLF PG++ L + + +Q AF F + Q+AL AM ALN
Sbjct: 50 NLFSSRPGFDHCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGT 109
Query: 130 -----KGSTLYIDLAKSNSRSKRSR------TDDEWTGSDKKARGPSAFSRGTADLGIGS 178
G L+I+LAKS+SR + D ++ A +A G D G
Sbjct: 110 VFDPDTGDRLHIELAKSSSRKRHGDGGVYRVVDKRLKRKERAADHENAGDGGNDDDAWGE 169
Query: 179 VHMPGMGNS---------------------AFNTIGYPHTQSHENFDARGGSLITTAKFN 217
G A + G P + H RG SL
Sbjct: 170 DDNGGNDGDGGSDEPLDTENDDSDEKNELPAERSSGQPGLKQH-----RGQSLSDDQPDK 224
Query: 218 NSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
SS ++ PC+TLFVANLG +CTE+EL +V SK PGF LK++ G PVAF DF
Sbjct: 225 LSS------DIPPCSTLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFT 278
Query: 278 --VTCVCVCHILFSLLFKEKLSDGISSNWDQWRLR 310
+ L + +DG+ + + ++R
Sbjct: 279 DIESSTAAMDALQGTVLASSDADGLQIEYARSKMR 313
>gi|326506974|dbj|BAJ95564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 122/279 (43%), Gaps = 55/279 (19%)
Query: 41 YMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHL 100
Y PQP P P V TLFVAGLP+DVKPREI+NLF PG++ L
Sbjct: 25 YAPQPLQHPDPRQG-------------VVTLFVAGLPDDVKPREIHNLFSRRPGFDHCLL 71
Query: 101 RSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDE 153
+ + +Q AF F +AL AM +LN G L+I+LAKSNSR +
Sbjct: 72 EYTGRGNQAVAFVSFFTHHAALSAMASLNGSVFDPDNGDCLHIELAKSNSRKRHG----G 127
Query: 154 WTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITT 213
GSD + + S +L PG T
Sbjct: 128 QGGSDGPSDEENDNSSDKNELLTDQSGEPG-----------------------------T 158
Query: 214 AKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAF 273
+ S+ P + PC+TLF++NLG TCTE+EL ++ SK PGF LK++ G P AF
Sbjct: 159 KQQKGRSSNDQPDKIPPCSTLFLSNLGQTCTEKELEELLSKQPGFHVLKMRRRGGLPAAF 218
Query: 274 VDFQ--VTCVCVCHILFSLLFKEKLSDGISSNWDQWRLR 310
DF + + SDG+ + + ++R
Sbjct: 219 ADFTDIESSTAAMENFKGTMLSSSDSDGLQIEYARSKMR 257
>gi|219363207|ref|NP_001136951.1| uncharacterized protein LOC100217110 [Zea mays]
gi|194697740|gb|ACF82954.1| unknown [Zea mays]
Length = 303
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 133/319 (41%), Gaps = 65/319 (20%)
Query: 29 PPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNL 88
PP P Y P PQ V TLFVAGLP+DVKPREI+NL
Sbjct: 11 PPAAAAVDPYYVYAAHPDPQRQG----------------VLTLFVAGLPDDVKPREIHNL 54
Query: 89 FREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKS 141
F P ++ L + + +Q AF F ++AL AM +LN G L+I+LAKS
Sbjct: 55 FSHRPAFDHCLLEYTGRGNQAVAFVTFFTHEAALSAMSSLNGTIFDPESGDRLHIELAKS 114
Query: 142 NSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMGNSAFNTI--------- 192
SR R + + DK+A + G AD +G+ + +
Sbjct: 115 TSRRPRGGVEG-YRVIDKRANK----TEGNAD-------HENVGDEDDDEVWGEDEDGGN 162
Query: 193 --------GYPHTQSHEN-----------FDARGGSLITTAKFNNSSAPSGPKNVTPCAT 233
P +EN D G +N ++ PC+T
Sbjct: 163 DNNGDGGSDEPSGTENENPSDKNELPTDQSDQPGHKQQNGQSLSNEGRDKSSSDIPPCST 222
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLL 291
+F+ANLG TCTE EL +V SK PGF LK++ G PVAF DF + + L +
Sbjct: 223 IFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESSTAAMNRLQGTV 282
Query: 292 FKEKLSDGISSNWDQWRLR 310
+DG+ + + ++R
Sbjct: 283 LASSDNDGLHIEYARSKMR 301
>gi|218197597|gb|EEC80024.1| hypothetical protein OsI_21699 [Oryza sativa Indica Group]
Length = 315
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 138/335 (41%), Gaps = 80/335 (23%)
Query: 27 PPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIY 86
PPPPG P Y P P P G V TLFVAGLP+DVKPREI+
Sbjct: 8 PPPPGD----PYYVYAPHPYPDTQRQG--------------VLTLFVAGLPDDVKPREIH 49
Query: 87 NLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN----------------- 129
LF PG++ L + + +Q AF F + Q+AL AM ALN
Sbjct: 50 KLFSSRPGFDHCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGT 109
Query: 130 -----KGSTLYIDLAKSNSRSKRSR------TDDEWTGSDKKARGPSAFSRGTADLGIGS 178
G L+I+LAKS+SR + D ++ A +A G D G
Sbjct: 110 VFDPDTGDRLHIELAKSSSRKRHGDGGVYRVVDKRLKRKERAADHENAGDGGNDDDAWGE 169
Query: 179 VHMPGMGNS---------------------AFNTIGYPHTQSHENFDARGGSLITTAKFN 217
G A + G P + H RG SL
Sbjct: 170 DDNGGNDGDGGSDEPLDTENDDSDEKNELPAERSSGQPGLKQH-----RGQSLSDDQPDK 224
Query: 218 NSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
SS ++ PC+TLFVANLG +CTE+EL +V SK PGF LK++ G PVAF DF
Sbjct: 225 LSS------DIPPCSTLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFT 278
Query: 278 --VTCVCVCHILFSLLFKEKLSDGISSNWDQWRLR 310
+ L + +DG+ + + ++R
Sbjct: 279 DIESSTAAMDALQGTVLASSDADGLQIEYARSKMR 313
>gi|242094708|ref|XP_002437844.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
gi|241916067|gb|EER89211.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
Length = 826
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 141/317 (44%), Gaps = 52/317 (16%)
Query: 28 PPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYN 87
P P Y P P PQ V TLFVAGLP+DVKPREI+N
Sbjct: 8 PHAAAAAVDPYYVYAPHPDPQ----------------RQGVLTLFVAGLPDDVKPREIHN 51
Query: 88 LFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAK 140
LF P ++ L + + +Q AF F ++AL AM +LN G L+I+LAK
Sbjct: 52 LFSHRPAFDHCLLEYTGRANQVVAFVTFFTHEAALSAMTSLNGTIFDPETGYRLHIELAK 111
Query: 141 SNSRSKR----------SRTD------DEWTGS--DKKARGPSAFSRGTADLGIGSVHMP 182
S SR R RT+ DE G D++ G D G G P
Sbjct: 112 STSRRPRGGGEVYRVIDKRTNKTEGNADENVGDEVDEEVWGGDE-DGANDDNGDGESDEP 170
Query: 183 -GMGN-SAFNTIGYPHTQSHE-NFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVANL 239
G N ++ + P QS + + G ++ + SS ++ PC+TLF+ANL
Sbjct: 171 SGTENENSSDKNELPADQSDQPRHKKQNGKSLSNDGRDKSS-----NDIPPCSTLFIANL 225
Query: 240 GPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHILFSLLFKEKLS 297
G TCT+ EL +V SK PGF LK++ G PVAF DF + + L + S
Sbjct: 226 GDTCTKDELNEVLSKEPGFDVLKMRRRGGMPVAFADFTDIESSTAAMNSLQGTVLASSDS 285
Query: 298 DGISSNWDQWRLRSWIQ 314
DG+ + LR+ ++
Sbjct: 286 DGLHIESELSTLRTMVR 302
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 131/291 (45%), Gaps = 52/291 (17%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQ---NSQPFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ + + N+ P F F + A A
Sbjct: 1 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKQGKNTSPVGFVTFETRVGAEAA 60
Query: 125 MYAL-------NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIG 177
AL + TL ++ AKSN++ + + + +A GP R DLG
Sbjct: 61 KQALQGVRFDPDIPQTLRLEFAKSNTKVSKPKQSSPQPPNSHQALGPHLTPREPYDLGAA 120
Query: 178 S--------VHMP---------GMGNSAFNTIGYPHTQSHENFDARGGSLITT------- 213
VH P M + AF+ H Q H S
Sbjct: 121 FFPGAPEAWVHHPLAAYAELGPAMHHPAFSHPAL-HAQPHPAHPVIAPSHPHAPIPQPPL 179
Query: 214 -AKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVA 272
A N+ A N PC+TLFVANLG TE+EL ++F + PGF +L++ + G P
Sbjct: 180 PASIANAMAAVTGSN-APCSTLFVANLGTHTTEEELRELFGRIPGFSRLRLHNKGGAPCC 238
Query: 273 FVDFQVTCVCVCHILFSLLFKEKLSDGISSNWDQWRLRSWIQSFKCVEFAK 323
FV+FQ +++F+ ++ + + D+ LR +EFAK
Sbjct: 239 FVEFQ-------NVVFASQALNQMQGQVMFSSDRGGLR--------IEFAK 274
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 28 PPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYN 87
P P V P+ P+ P PQP P P +A GS TLFVA L E+
Sbjct: 158 PHPAHPVIAPSHPHAPIPQP-PLPASIANAMAAVTGSNAPCSTLFVANLGTHTTEEELRE 216
Query: 88 LFREFPGYESSHLRSSTQNSQPFAF-----AVFSDQ---QSALGAMYALNKGSTLYIDLA 139
LF PG+ S LR + P F VF+ Q Q M++ ++G L I+ A
Sbjct: 217 LFGRIPGF--SRLRLHNKGGAPCCFVEFQNVVFASQALNQMQGQVMFSSDRGG-LRIEFA 273
Query: 140 KSNSRSKRSR 149
K+ ++R
Sbjct: 274 KNKMGEPQTR 283
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 41/255 (16%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQS 120
S DEVRTLFV+GLP D KPRE+Y LFR + GYE S L+ + +N + P F F +
Sbjct: 18 SEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTNKNGKTASPVGFVTFHTRSE 77
Query: 121 ALGAMYALNKG--------STLYIDLAKSNSRSKRSRTDDEWTGSDKKAR---------- 162
A A + L +G T+ ++ AKSN++ + + + A
Sbjct: 78 AEAAKHDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLTGPLGS 137
Query: 163 -----GPSAFSR----GTADLGIGSVHMPGMGNSAFN------TIGYPHTQSHENFDARG 207
GP + TA G++ + + A + ++ PH + + A
Sbjct: 138 PFFPGGPELWHHPLAYSTAGELPGTLQHAALVHPALHPQVPVPSMSLPHPTTLTSLHASL 197
Query: 208 GSLITTAKF-----NNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLK 262
+ + ++SS PS + PC+TLFVANLG +E EL ++F+ PGF +L+
Sbjct: 198 PHFLPSPALASPVGSSSSQPSIAVSNAPCSTLFVANLGQFVSEHELKEIFNSFPGFCRLR 257
Query: 263 IQSTYGPPVAFVDFQ 277
+ + G PVAFV++Q
Sbjct: 258 MHTKGGSPVAFVEYQ 272
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 31 GGVVAPPTQPYMPQPQ---PQPPPLGSYSASFPAY----------GSYDE---------- 67
+V P P +P P P P L S AS P + GS
Sbjct: 166 AALVHPALHPQVPVPSMSLPHPTTLTSLHASLPHFLPSPALASPVGSSSSQPSIAVSNAP 225
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
TLFVA L + V E+ +F FPG+ LR T+ P AF + D + A AM
Sbjct: 226 CSTLFVANLGQFVSEHELKEIFNSFPGF--CRLRMHTKGGSPVAFVEYQDVRYAAQAMAT 283
Query: 128 LNKGSTL 134
L +GS L
Sbjct: 284 L-QGSLL 289
>gi|452825214|gb|EME32212.1| RNA-binding protein, putative [Galdieria sulphuraria]
Length = 333
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 118/241 (48%), Gaps = 48/241 (19%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFR-EFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
S D VRTLF+ G P DV RE++NLFR +P Y+ +++S++ +P FAVF ++ A
Sbjct: 22 SEDTVRTLFITGFPADVLEREVHNLFRFRYPLYDGCIIKNSSRRKEPVVFAVFRTREEAE 81
Query: 123 GAMYALNK-------GSTLYIDLAKSNSRSKRS---------RTDDEWTGSDKKARGPSA 166
AM + GS L I+ AKSN+R KR +E +K+ RG S
Sbjct: 82 EAMKDFDGIVFDPALGSKLKIEFAKSNTRVKRDWAHSSSFEDNRRNEGRRVEKRYRG-SD 140
Query: 167 FSRGTADLGIGS----VHMPGMGNSAFNT---IGYPHTQSHENFDARGGSLITTAKFNNS 219
+S GT G+ + PG N A N + YP F+N
Sbjct: 141 YSLGTGTGGVVAQLPLFTQPGSWNLASNNTPGLQYPM-------------------FSNV 181
Query: 220 SAP--SGPK-NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQ-STYGPPVAFVD 275
S P S P N C+TLFV NL P+ T+ EL +FS+C GF ++++ PVAFV+
Sbjct: 182 SLPLTSNPSFNQNACSTLFVGNLSPSVTQAELENLFSRCTGFRRVRLNIKDERAPVAFVE 241
Query: 276 F 276
F
Sbjct: 242 F 242
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 55/269 (20%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR + GYE S L+ + +N + P F F+ + +A
Sbjct: 1 QVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKNGKTTSPVGFVTFTSRVAAEA 60
Query: 124 AMYALNKG--------STLYIDLAKSNSRSKRSRTD------------------------ 151
A L +G TL ++ AKSN++ + +
Sbjct: 61 AKQDLQQGVRFDPDLPQTLRLEFAKSNTKVTKPKQQSPQPAATHPTFIHPLTGQEIGGAF 120
Query: 152 -------DEWTGSDKKARGPSAFSRGTADLGI-------GSVH----MPGMGNSAFNT-I 192
+ W G + S + VH M G +A N+ +
Sbjct: 121 FPGMPGAEAWPGHPLVTGAYTELSPALHHPALLQHPALAAQVHPALAMSGHHAAAMNSAV 180
Query: 193 GYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVF 252
+PH + + G +T+ + S + PC+TLFVANLGP C+EQEL +F
Sbjct: 181 PHPHMAASPVLGSPVGGATSTSTLTSPSLATATSTHAPCSTLFVANLGPFCSEQELKDLF 240
Query: 253 SKCPGFLKLKIQSTYGPPVAFVDFQ-VTC 280
GFL+L++ + G PVAFV++Q V C
Sbjct: 241 QSISGFLRLRMHNKGGSPVAFVEYQDVRC 269
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + + + + + A G
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASVSHYFFKLPAQGVR 79
Query: 126 YALNKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKA---------------------RGP 164
+ + T+ ++ AKSN++ + + + A P
Sbjct: 80 FDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLTGHLGSPFFPGGPELWHHP 139
Query: 165 SAFSRGT---ADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNN-SS 220
A+S L ++ P + + PH + + A + + +
Sbjct: 140 LAYSTAGELPGTLQHATLVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVG 199
Query: 221 APSGPKNV----TPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
+PS N+ PC+TLFVANLG +E EL +FS PGF +L++ + G PVAFV++
Sbjct: 200 SPSSQPNIAVSNAPCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEY 259
Query: 277 Q 277
Q
Sbjct: 260 Q 260
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY--------------------GSYDEVRT 70
+V P P +P P P P L S AS P + S T
Sbjct: 157 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCST 216
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L +
Sbjct: 217 LFVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFVEYQDVRYAAQAMATL-Q 273
Query: 131 GSTLY------IDLAKSNSRSKRSRTDDEWT-GSDKKARG 163
GS L I + + S+ + W GS ++ G
Sbjct: 274 GSFLLSSDRGAIRIEYAKSKMAEVGFTNLWIEGSKREENG 313
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 118/268 (44%), Gaps = 62/268 (23%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN---SQPFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ + +N S P F FS + A
Sbjct: 25 EEVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVTFSSRAGAE 84
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKRSRTDDE--------------WTGSDKK 160
A L +G T+ ++ AK S +K S+ + TG +
Sbjct: 85 AAKQELQQGVRFDPDLPQTIRLEFAK--SNTKVSKPKQQSPPAAATHPTLLHPITGQEIS 142
Query: 161 ARGPSAFSRGTAD------LGIGSV------HMPGMGNSAFNT-----IGYPHTQSHENF 203
A A GT D L V H + + A + + PH SH
Sbjct: 143 A----ALLPGTHDGWPHHPLSYAEVPVTTTLHTAALMHPALHAQLPPPLTVPHPLSHAAL 198
Query: 204 DARGGSLITTA---KFNNSSAPSGPKNVT-----------PCATLFVANLGPTCTEQELT 249
++ T S A + P T PC+TLFVANLG +EQEL
Sbjct: 199 AGSAAAIHATMPPPHLVASPALASPVGSTSSSAAAAAGTPPCSTLFVANLGQFVSEQELK 258
Query: 250 QVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
+F PGF +L++ + G PVAFV++Q
Sbjct: 259 DLFGSFPGFCRLRMHNKGGAPVAFVEYQ 286
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN 129
TLFVA L + V +E+ +LF FPG+ LR + P AF + D + A AM AL
Sbjct: 242 TLFVANLGQFVSEQELKDLFGSFPGF--CRLRMHNKGGAPVAFVEYQDVRLATHAMNAL- 298
Query: 130 KGSTLY 135
+G L+
Sbjct: 299 QGCVLF 304
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 7/103 (6%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+ TLFV+GLP+DVK REI+NLFR PG++S L+ + + +Q AFA F + QSA+ A++A
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARG 163
LN GS L+I+LA+SNSR KR + DK+++G
Sbjct: 80 LNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRSKG 122
>gi|255568059|ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
++DEVRT+F+ GLPEDVK RE+ NL R PGYE+S + + + +P FA+FS Q A+
Sbjct: 54 THDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV--NYKGEKPMGFALFSTSQFAIA 111
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSRT-DDEWTGSDKKARGPSAFSRGTADLG 175
A AL S L+ ++AK N KR D K+ R +S
Sbjct: 112 AKEALQDMLFDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTP 171
Query: 176 IGSV-----------HMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSG 224
+M GYP Q A + + N+
Sbjct: 172 SPFHPPPAPVWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNT----- 226
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E EL +FS PGF ++K+ V F++F+
Sbjct: 227 -KDNPPCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFE 278
>gi|413921011|gb|AFW60943.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 23/227 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 46 DEVRTIFITGLPADVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSTAHQAIAAK 103
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD----L 174
AL L+ ++AK N KR G D A S R D
Sbjct: 104 TALQDMVFDAETKVALHTEMAKKNLFVKRC------VGIDANAVDQSKRLRTGGDYTHSP 157
Query: 175 GIGSVHMPGMGNSAFNTIGY----PHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVTP 230
H P S + T GY P + + ++ + A +A + ++ P
Sbjct: 158 YAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDNPP 217
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
C TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 218 CNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 264
>gi|413921013|gb|AFW60945.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 314
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 46 DEVRTIFITGLPADVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSTAHQAIAAK 103
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD----L 174
AL L+ ++AK N KR G D A S R D
Sbjct: 104 TALQDMVFDAETKVALHTEMAKKNLFVKRC------VGIDANAVDQSKRLRTGGDYTHSP 157
Query: 175 GIGSVHMPGMGNSAFNTIGY----PHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT- 229
H P S + T GY P + + ++ + A +A + +N
Sbjct: 158 YAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKD 217
Query: 230 --PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 218 NPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 267
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 7/94 (7%)
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P Y + TLF++GLP+DVK REI+NLFR PG++S L+ + + +Q AFA F + Q
Sbjct: 17 PTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQ 76
Query: 120 SALGAMYALN-------KGSTLYIDLAKSNSRSK 146
SA+ A++ALN GS L+I+LA+SNSR K
Sbjct: 77 SAVTALHALNGVKFDPQSGSVLHIELARSNSRRK 110
>gi|195641146|gb|ACG40041.1| cell wall integrity protein scw1 [Zea mays]
gi|195642380|gb|ACG40658.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 46 DEVRTIFITGLPADVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSTAHQAIAAK 103
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD----L 174
AL L+ ++AK N KR G D A S R D
Sbjct: 104 TALQDMVFDAETKVALHTEMAKKNLFVKRC------VGIDANAVDQSKRLRTGGDYTHSP 157
Query: 175 GIGSVHMPGMGNSAFNTIGY----PHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT- 229
H P S + T GY P + + ++ + A +A + +N
Sbjct: 158 YAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKD 217
Query: 230 --PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 218 NPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 267
>gi|226531816|ref|NP_001149394.1| LOC100283020 [Zea mays]
gi|195626938|gb|ACG35299.1| cell wall integrity protein scw1 [Zea mays]
gi|413921012|gb|AFW60944.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 46 DEVRTIFITGLPADVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSTAHQAIAAK 103
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD----L 174
AL L+ ++AK N KR G D A S R D
Sbjct: 104 TALQDMVFDAETKVALHTEMAKKNLFVKRC------VGIDANAVDQSKRLRTGGDYTHSP 157
Query: 175 GIGSVHMPGMGNSAFNTIGY----PHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT- 229
H P S + T GY P + + ++ + A +A + +N
Sbjct: 158 YAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKD 217
Query: 230 --PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 218 NPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 267
>gi|297835092|ref|XP_002885428.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
gi|297331268|gb|EFH61687.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
YDE+RT+F+AGLP+DVK RE+ NL R PGYE+S + + + +P FA+FS Q A+ A
Sbjct: 55 YDELRTIFIAGLPDDVKERELLNLLRWLPGYEASQV--NFKGEKPMGFALFSTAQYAMAA 112
Query: 125 -------MYALNKGSTLYIDLAKSN--------------SRSKRSRTDDEWTGSDKKARG 163
++ S ++ ++AK N +SKR RT + T S
Sbjct: 113 KDNLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSP 172
Query: 164 PSAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPS 223
G +M GY + + N
Sbjct: 173 FHPPPPPVWGPPHG--YMAPAPPPYDPYAGYHAPPVPMPAPPPIAAPSSYVPVQN----- 225
Query: 224 GPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+EL + S PGF ++KI V F++F+
Sbjct: 226 -IKDNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFE 278
>gi|9294016|dbj|BAB01919.1| unnamed protein product [Arabidopsis thaliana]
Length = 271
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 108 QPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKK 160
Q AFA F+ + AL AM LN GS L+I+LA+SNSR K + D +
Sbjct: 51 QVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNR 110
Query: 161 ARGPSAFSRGTADLGIGS---VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFN 217
+ S +D G V PG +S + + D+ S +A +
Sbjct: 111 NKEISKSQDDQSDEGDSDPDEVQEPGNSDSP-----KENDTTKSEADSEPDSKAPSANGH 165
Query: 218 NSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
A G C+TLF+ANLGP CTE EL Q+ S+ PGF LKI++ G PVAF DF+
Sbjct: 166 LEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFE 225
>gi|9280223|dbj|BAB01713.1| unnamed protein product [Arabidopsis thaliana]
Length = 317
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
YDE+RT+F+AGLP+DVK RE+ NL R PGYE+S + + + +P FA+FS Q A+ A
Sbjct: 55 YDELRTIFIAGLPDDVKERELLNLLRWLPGYEASQV--NFKGEKPMGFALFSTAQFAMAA 112
Query: 125 -------MYALNKGSTLYIDLAKSN--------------SRSKRSRTDDEWTGSDKKARG 163
++ S ++ ++AK N +SKR RT + T S
Sbjct: 113 KDTLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSP 172
Query: 164 PSAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPS 223
G +M GY + +APS
Sbjct: 173 FHPPPPPVWGPPHG--YMAPAPPPYDPYAGYH------------APPVPMPTPPPIAAPS 218
Query: 224 ------GPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+EL + S PGF ++KI V F++F+
Sbjct: 219 SYVPVQNIKDNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFE 278
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 98/232 (42%), Gaps = 28/232 (12%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRT+F+ GLPEDVK REI NL R PG+E+S L + +P FA+FS A+ A
Sbjct: 2 EEVRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAE--KPMGFALFSSPHQAIAAK 59
Query: 126 YAL-------NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGS 178
L + S L+ ++AK N KR G+D A S R D
Sbjct: 60 DILQDMLFDPDSKSVLHTEMAKKNLFVKRG------IGADAVAFDQSKRLRTAGDYTHTG 113
Query: 179 VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNS-------SAPS------GP 225
P + + PH +APS
Sbjct: 114 YVTPSPFHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNT 173
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 174 KDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFE 225
>gi|224100531|ref|XP_002311913.1| predicted protein [Populus trichocarpa]
gi|222851733|gb|EEE89280.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
+++EVRT+F+ G P+DVK RE+ NL R PGYE+S + + + + FA+FS Q A+
Sbjct: 50 THEEVRTIFITGFPDDVKERELQNLLRWLPGYEASQV--NYKGDKAMGFALFSSSQHAIA 107
Query: 124 A-------MYALNKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
A ++ + S L+ ++AK N KR +D A S R D
Sbjct: 108 AKDSLQDMVFDVETKSVLHTEMAKKNLFVKRGIV------ADSNAYDQSKRLRTGGDYSH 161
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHEN---FDARGG-------SLITTAKFNNSSAP-SGP 225
+ P + G PH +D GG +S P
Sbjct: 162 AAYTTPSPFHPPPPVWG-PHGYMAPVPPPYDPYGGYPAPQVPMPPAPIPAPSSYVPIQNT 220
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E EL +FS PGF ++KI V F++F+
Sbjct: 221 KDNPPCNTLFIGNLGQNINEDELRGLFSVQPGFKQMKILRQERHTVCFIEFE 272
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR GYE + L+ +++N + P F F QQ A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQD 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARG-PSAFSRGTADLG 175
A L L ++LAKSN++ R + S A G P + DL
Sbjct: 89 ARKMLQGVRFDPECAQVLRLELAKSNTKVSRPKQSPPPQQSALAAAGVPQFLAPMQPDLL 148
Query: 176 IGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNN----------------- 218
+ + + PH + + A + + +FN
Sbjct: 149 LDPQSAALLNEHQLLALSLPHLHAAQALQAYMPA--SLQQFNQPLYAAAAAQLHPAAAAA 206
Query: 219 ---SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVD 275
S+ P + + C+TLFVANL E +L VF GF +L++ + G VAFV+
Sbjct: 207 AGLSAQPQA--STSACSTLFVANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVE 264
Query: 276 F 276
+
Sbjct: 265 Y 265
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYAL 128
TLFVA L +V ++ +F+ F G+ + LR +N AF +SD Q A AM AL
Sbjct: 222 TLFVANLSAEVNEDQLRGVFKAFTGF--TRLRLHNKNGSCVAFVEYSDLQKATQAMLAL 278
>gi|357467715|ref|XP_003604142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505197|gb|AES86339.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 311
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 98/233 (42%), Gaps = 27/233 (11%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S +EVRT+F+ GLPEDVK RE+ NL R PG+E+S L + +P FA+F+ A+
Sbjct: 31 SSEEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAE--KPMGFALFNSPHQAIA 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
A L S L+ ++AK N KR G+D A S R D
Sbjct: 89 AKDILQDMLFDPEAKSVLHTEMAKKNLFVKRG------IGADAVAFDQSKRLRTAGDYNH 142
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFN------NSSAPS------G 224
P + + PH S APS
Sbjct: 143 TGYVTPSPFHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQN 202
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 203 TKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFE 255
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 98/233 (42%), Gaps = 27/233 (11%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S +EVRT+F+ GLPEDVK RE+ NL R PG+E+S L + +P FA+F+ A+
Sbjct: 31 SSEEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAE--KPMGFALFNSPHQAIA 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
A L S L+ ++AK N KR G+D A S R D
Sbjct: 89 AKDILQDMLFDPEAKSVLHTEMAKKNLFVKRG------IGADAVAFDQSKRLRTAGDYNH 142
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFN------NSSAPS------G 224
P + + PH S APS
Sbjct: 143 TGYVTPSPFHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQN 202
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 203 TKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFE 255
>gi|357467717|ref|XP_003604143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505198|gb|AES86340.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 98/233 (42%), Gaps = 29/233 (12%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S +EVRT+F+ GLPEDVK RE+ NL R PG+E+S L + +P FA+F+ A+
Sbjct: 31 SSEEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAE--KPMGFALFNSPHQAIA 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
A L S L+ ++AK N KR G+D A S R D
Sbjct: 89 AKDILQDMLFDPEAKSVLHTEMAKKNLFVKR--------GADAVAFDQSKRLRTAGDYNH 140
Query: 177 GSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFN------NSSAPS------G 224
P + + PH S APS
Sbjct: 141 TGYVTPSPFHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQN 200
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 201 TKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFE 253
>gi|40253748|dbj|BAD05688.1| putative mec-8 [Oryza sativa Japonica Group]
gi|40253912|dbj|BAD05845.1| putative mec-8 [Oryza sativa Japonica Group]
Length = 315
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 22/237 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 59 DEVRTIFITGLPTDVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSSAHHAIAAK 116
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGS 178
AL + L+ ++AK N KR +D D+ R + +
Sbjct: 117 AALQDLIFDAETKTALHTEMAKKNLFVKRGVGNDA-NAMDQSKRLRTGGDYTHSPYAAPP 175
Query: 179 VHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGP---------KNVT 229
H P S + T GY N A S+ A + S P GP K+
Sbjct: 176 YHPPPPAVSMWGTPGYIAAPPPYNHYA-AYSVPPVAMTSPSPVP-GPTAYAPVQNTKDNP 233
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTCVCVCH 285
PC TLF+ NLG T E+EL +FS PG+ ++K+ V F++F+ V H
Sbjct: 234 PCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVH 290
>gi|168054248|ref|XP_001779544.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669025|gb|EDQ55620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
++VRT+FV G P DVK RE+ NL R +PGYE+S + + + QP FA+FS A+ A
Sbjct: 1 EQVRTIFVLGFPSDVKERELQNLLRWWPGYEASQM--NFKCDQPMGFALFSTVAMAMAAR 58
Query: 126 YAL-------NKGSTLYIDLAKSNSRSKRSRTDD---EWTGSDKKARGPSAFSRGTADLG 175
AL + S L ++AK N KR D + GS + G +S
Sbjct: 59 DALQNLVFDADTNSVLRAEMAKKNLFVKRGVAGDPCISFDGSKRMRTGGGDYSPAPYSAP 118
Query: 176 IGSVHMPGMGNS-----AFNTIGYPHTQSHENFDARGGSL------ITTAKFNNSSAP-S 223
S ++ S A T G P Q +D G + IT + + AP
Sbjct: 119 YPSTYLTQPMTSPTPAWAPQTYGLPQPQ----YDQYGAYVAPQPLPITPSGY----APVQ 170
Query: 224 GPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF-QVTCVC 282
K+ PC TLF+ NLG E EL +FS GF ++K+ V F++F V
Sbjct: 171 NTKDNPPCNTLFIGNLGEAVNEIELRALFSGQLGFRQMKVLRQGKNIVCFIEFLDVNSAM 230
Query: 283 VCH 285
+ H
Sbjct: 231 LVH 233
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 111/250 (44%), Gaps = 44/250 (17%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
VRTLFV+GLP D KPRE+Y LFR + GYESS L+ + +N + P F F+ + +A
Sbjct: 64 RVRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEE 123
Query: 124 AMYALNKGST-------LYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGI 176
A +L + ++ A+SN++ + + A P +L
Sbjct: 124 AKQSLQGVKFDPELPQPIRLEFARSNTKVCKPKVQS----PPASAYAPFLHPITGHELMA 179
Query: 177 GSVHMPG--MGNSAFNTIG------YPH-----TQSHENFDARGGSLITTAKFNNSSAPS 223
+H PG + + A + +PH T H L + +A S
Sbjct: 180 PILHGPGADLFHPALASYAAEFAQTFPHPLLQNTLQHPALPPIPHQLASHYPAAMLAAAS 239
Query: 224 GPKNVTPCATL-----------------FVANLGPTCTEQELTQVFSKCPGFLKLKIQST 266
G + P A+L FVANLG EQEL +VFS PGF++L+I
Sbjct: 240 GMPGMLPPASLPPTSVSSMSAGQPSTTLFVANLGAKTQEQELLEVFSNIPGFIRLRILHK 299
Query: 267 YGPPVAFVDF 276
G PVAFV++
Sbjct: 300 NGFPVAFVEY 309
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN 129
TLFVA L + +E+ +F PG+ LR +N P AF +SD +A A+ AL
Sbjct: 266 TLFVANLGAKTQEQELLEVFSNIPGF--IRLRILHKNGFPVAFVEYSDVINANHALNALQ 323
Query: 130 KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKK 160
+ D RS+ + G +K
Sbjct: 324 GFVLMSSDRGGMRIEFARSKPAEVGGGFGRK 354
>gi|224113311|ref|XP_002316452.1| predicted protein [Populus trichocarpa]
gi|222865492|gb|EEF02623.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRT+F+ G P+DVK RE+ NL R PGYE+S + + + + FA+FS Q A+ A A
Sbjct: 1 VRTIFITGFPDDVKERELQNLLRWLPGYEASQV--NYKGEKAMGFALFSCAQHAIAAKDA 58
Query: 128 L-------NKGSTLYIDLAKSNSRSKRSRT-DDEWTGSDKKARGPSAFSRGTADLGIGSV 179
L + S L+ ++AK N KR D K+ R +S T
Sbjct: 59 LQDMVFDADTKSVLHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTT-------- 110
Query: 180 HMPGMGNSAFNTIGYPH---TQSHENFDARGG--------SLITTAKFNNSSAP-SGPKN 227
+ + PH T + +D GG +S P K+
Sbjct: 111 YTSPSPFHPPPPVWGPHGYMTPAPPPYDPYGGYPVPQVPMPPPAPIPAPSSYVPVQNTKD 170
Query: 228 VTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG E EL +FS PGF ++K+ V F++F+
Sbjct: 171 NPPCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFE 220
>gi|242081063|ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
gi|241941650|gb|EES14795.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
Length = 320
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F+ GLP DVK RE++NL R PG+E+S + + + QP FA+FS A+ A
Sbjct: 45 DEVRTIFITGLPADVKERELHNLLRWLPGFEASQI--NFKGDQPMGFALFSSAHQAIAAK 102
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD----L 174
AL L+ ++AK N KR G D A S R D
Sbjct: 103 AALQDMVFDAETQVALHTEMAKKNLFVKRG------VGIDANAVDQSKRLRTGGDYTHSP 156
Query: 175 GIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGP--------- 225
H P S + T GY + ++ + + S +GP
Sbjct: 157 YAPPFHPPPPAVSMWGTPGY--ITAPPPYNPYAAYPVPPVAMTSPSPVTGPTAYAPVQNT 214
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG T E+EL +FS PG+ ++K+ V F++F+
Sbjct: 215 KDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFE 266
>gi|343172665|gb|AEL99036.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 94 GYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSK 146
G++S L+ + + +Q AF F + QSA+ A+ AL+ G+ L+I+LA+SNSR K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 147 RSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMG-NSAFNTIGYPHTQSHENFDA 205
R + DK+ + + +++ G + + N Q+ E D
Sbjct: 61 RKSGSGPYVVIDKRRKAANDAEEMSSEDGDNESNNSHQSEDQDQNNSSGDDEQTDEKSDV 120
Query: 206 RGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQS 265
+ L N ++ PC+TLF+ANLG C E+EL Q S+ PGF LK +
Sbjct: 121 KKADLNDPKYAANKPTEKTSSDLQPCSTLFIANLGSKCKEEELKQALSEYPGFKGLKRRG 180
Query: 266 TYGPPVAFVDFQ 277
VAF D++
Sbjct: 181 K--GTVAFADYE 190
>gi|270002453|gb|EEZ98900.1| hypothetical protein TcasGA2_TC004515 [Tribolium castaneum]
Length = 296
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 47/256 (18%)
Query: 79 DVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGAMYALNKG---- 131
D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A A L +G
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAAKQDLQQGVRFD 61
Query: 132 ----STLYIDLAKSNSRSKRSRTDDE---------------------WTGSDKKARGPSA 166
T+ ++ AKSN++ + + + G + P A
Sbjct: 62 PDMPQTIRLEFAKSNTKVSKPKQQAANAANTHPTLMHPLTGHLGTPFFPGGPELWHHPLA 121
Query: 167 FSRGT----ADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSL--------ITTA 214
+S A L ++ P + + PH + + A SL + +
Sbjct: 122 YSAAAELPGAALQHATLVHPALHPQVPPPMSLPHPTALTSVHA--ASLPHFLPSPALASP 179
Query: 215 KFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFV 274
++SS P + PC+TLFVANLG +E EL ++F+ PGF +L++ + G PVAF+
Sbjct: 180 VGSSSSQPGLGVSNPPCSTLFVANLGQFVSEHELKEIFASFPGFCRLRMHNKGGSPVAFM 239
Query: 275 DFQVTCVCVCHILFSL 290
++Q C ++ +L
Sbjct: 240 EYQ-DVRCAAQVMAAL 254
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 17 QTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYG-SYDEVRTLFVAG 75
Q PPP P P V A ++P P P+GS S+S P G S TLFVA
Sbjct: 146 QVPPPMSLPHPTALTSVHAASLPHFLPSPA-LASPVGS-SSSQPGLGVSNPPCSTLFVAN 203
Query: 76 LPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNKGSTLY 135
L + V E+ +F FPG+ LR + P AF + D + A M AL L
Sbjct: 204 LGQFVSEHELKEIFASFPGF--CRLRMHNKGGSPVAFMEYQDVRCAAQVMAALQGSFLLS 261
Query: 136 IDLAKSNSRSKRSRTDDE 153
D +S+ E
Sbjct: 262 SDRGPIRIEYAKSKMAAE 279
>gi|343172667|gb|AEL99037.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 94 GYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSK 146
G++S L+ + + +Q AF F + QSA+ A+ AL+ G+ L+I+LA+SNSR K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 147 RSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVHMPGMG-NSAFNTIGYPHTQSHENFDA 205
R + DK+ + + +++ G + + N Q+ E D
Sbjct: 61 RKSGSGPYVVIDKRRKAANDAEEMSSEDGDNESNNSHQSEDQDQNNSSSDDEQTDEKSDV 120
Query: 206 RGGSLITTAKFNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGF--LKLKI 263
+ L N ++ PC+TLF+ANLG C E+EL Q S+ GF LK ++
Sbjct: 121 KKADLNDPKDAANKPTEKTSGDLQPCSTLFIANLGSKCKEEELKQALSEYHGFKGLKRRV 180
Query: 264 QSTYGPPVAFVDFQ 277
+ T VAF D++
Sbjct: 181 KGT----VAFADYE 190
>gi|159475870|ref|XP_001696037.1| hypothetical protein CHLREDRAFT_104778 [Chlamydomonas reinhardtii]
gi|158275208|gb|EDP00986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 269
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 15/227 (6%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G+ DEVRT+FV G P DVK RE+ NL R PGYE+S + ++Q FA+F+ A
Sbjct: 2 GATDEVRTVFVTGFPIDVKERELNNLLRFLPGYEASQMNYGKGSAQ--GFALFTSGAHAR 59
Query: 123 GAMYAL-----NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIG 177
A L ++ S+L ++A+ N K + + K+AR P++ T G+
Sbjct: 60 AACDQLQHVRFDENSSLRAEMARKNMYIK------DMEPNAKRAR-PASGMVVTGGYGVP 112
Query: 178 SVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT-PCATLFV 236
P + + + +R GS ++A + ++ PC TLFV
Sbjct: 113 PSGGPSQRRAPLWLLPHRRVAPTAGGYSRPGSFGGPGGGGGAAAAAAARDDNPPCNTLFV 172
Query: 237 ANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCVCV 283
NL + E EL +FS PGF +LK+ + FV+F T +
Sbjct: 173 GNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAI 219
>gi|255572977|ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
gi|223533229|gb|EEF34985.1| RNA binding protein, putative [Ricinus communis]
Length = 206
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 125 MYALN-------KGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIG 177
M++LN GSTL+I+LA+SNSR R + DK+ + S ++D G G
Sbjct: 1 MHSLNGVKFDPQSGSTLHIELARSNSRRVRKPGSGAYVVIDKRTQQASNAQETSSDYG-G 59
Query: 178 SVHMPGMGNSAFNTIGYPHTQSHENFD-ARGGSLITTAK-----------FNNSSAPSGP 225
S + T + +N D A G L+ N S +
Sbjct: 60 SD--SDETAAPAPAPAPAPTTATDNTDSANQGDLMNVKSEPAGDPDNASVLANESEKTAE 117
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
V PC+TLF+ANLGP CTE EL S+ PGF LK+++ G PVAF DF+
Sbjct: 118 GGVHPCSTLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAKGGMPVAFADFE 169
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 40/183 (21%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
D VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +T+ QP F F + A A
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTTK--QPVGFVTFESRAGAEAAK 70
Query: 126 YAL-------NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGS 178
AL + TL ++ AK+N++ ++ + + A GP F+R +LG
Sbjct: 71 QALQGVRFDPDMPQTLRLEFAKANTKVQKPKQNSTTPQVGIPAIGPH-FAREPYELG--- 126
Query: 179 VHMPGMGNSAFNTIGYPHTQSHENF--------DARGGSLITTAKFNNSSAPSGPKNVTP 230
AF T G P +H F + +GGS + +F + P
Sbjct: 127 --------GAFFT-GVPEAWAHHPFPGFSRLRLNNKGGSPVCFIEFTD----------IP 167
Query: 231 CAT 233
CAT
Sbjct: 168 CAT 170
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 37/250 (14%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
+RTL+++G P DVK REI+NLFR + GYE S L+ + AF F+ ++A+ A
Sbjct: 22 MRTLWLSGFPLDVKHREIHNLFRPYRGYEDSILKPNG-----VAFVTFTSHEAAVAAKSD 76
Query: 128 L-------NKGSTLYIDLAKSNSRSKRSRTDDE----WTGSDKKARGPSAFSRGT----- 171
+ + L ++ AK NS+ +R + W+ + R A + G
Sbjct: 77 ITGLHFDPDGTDVLKVEFAKQNSKRRREAEESASPEFWSKEREAKRIKRALAGGGGGGGG 136
Query: 172 -ADLGIGSVHMPGMGNSAFN---TIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKN 227
+ + +++ G+ FN G + GG + P+G
Sbjct: 137 PTSIDVNAMYRAGLAGYPFNPPSMYGLSSMGPVPDAYLLGGQ-------DRLPKPAGKSL 189
Query: 228 VT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFV---DFQVTCVC 282
V P +TLF++NLG +EQE+++VF GF++ ++ + AFV D++ +
Sbjct: 190 VRFPPGSTLFISNLGTASSEQEISEVFGAFQGFVRAQLYNRGHNINAFVQYKDYESSTQA 249
Query: 283 VCHILFSLLF 292
+ H+ S+L
Sbjct: 250 LNHLQGSVLM 259
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P Y + VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F +
Sbjct: 17 PQYEKWHHVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRA 74
Query: 120 SALGAMYALN-------KGSTLYIDLAKSNSRSKRSR 149
A A ALN TL ++ AK+N++ +S+
Sbjct: 75 GAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSK 111
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 54 SYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN---SQPF 110
+ S S + + +EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N S P
Sbjct: 12 TLSQSMDSVNTEEEVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTSKNGKTSSPV 71
Query: 111 AFAVFSDQQSALGAMYALNKG--------STLYIDLAKSNSRSKRSRTDDE 153
F FS + A A L +G T+ ++ AKSN++ + + ++
Sbjct: 72 GFVTFSTRAGAEAAKQELQQGVRFDPDLPQTIRLEFAKSNTKVSKPKQSNQ 122
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P + DEVRT+F+ GLPEDVK RE+ NL R PGYE+S + + + +P FA+FS+ Q
Sbjct: 48 PGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV--NFKGEKPMGFALFSNAQ 105
Query: 120 SALGAMYALNK-------GSTLYIDLAKSNSRSKRSRTDD 152
A+ A AL S L+ ++AK N KR D
Sbjct: 106 FAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVAD 145
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 22 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 79
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 80 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 110
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 22 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 79
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 80 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 110
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A
Sbjct: 19 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAK 76
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 77 NALNGIRFDPECPQTLRLEFAKANTKMAKSK 107
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A
Sbjct: 18 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAK 75
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 76 NALNGIRFDPESPQTLRLEFAKANTKMAKSK 106
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 145 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 202
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 203 NALNGIRFDPENPQTLRLEFAKANTKMAKNK 233
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 17 EEVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 75 NALNGVRFDPENPQTLRLEFAKANTKMAKSK 105
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 33 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 90
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 91 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 121
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F++GLPEDVK RE+ NL R PGYE+S + + + P FA+FS Q A+ A
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQV--NFKGEHPMGFALFSTPQLAVAAK 104
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDD 152
AL + S L+ ++AK N KR D
Sbjct: 105 DALQEMVFDAESKSVLHTEMAKKNLFVKRGIVAD 138
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCV 283
K+ PC TLF+ NLG E+EL +FS PGF ++KI V F++F+ T V
Sbjct: 218 KDNPPCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNV 277
Query: 284 CHIL 287
H L
Sbjct: 278 HHSL 281
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 30 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 87
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 88 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 118
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 28 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 85
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 86 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116
>gi|30686138|ref|NP_683582.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211 [Arabidopsis thaliana]
gi|23505943|gb|AAN28831.1| At3g21211/At3g21211 [Arabidopsis thaliana]
gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis thaliana]
gi|110740646|dbj|BAE98426.1| hypothetical protein [Arabidopsis thaliana]
gi|222423570|dbj|BAH19754.1| AT3G21215 [Arabidopsis thaliana]
gi|332642956|gb|AEE76477.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 339
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
YDE+RT+F+AGLP+DVK RE+ NL R PGYE+S + + + +P FA+FS Q A+ A
Sbjct: 55 YDELRTIFIAGLPDDVKERELLNLLRWLPGYEASQV--NFKGEKPMGFALFSTAQFAMAA 112
Query: 125 -------MYALNKGSTLYIDLAKSNSRSKRSRTDD 152
++ S ++ ++AK N KR D
Sbjct: 113 KDTLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGD 147
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG E+EL + S PGF ++KI V F++F+
Sbjct: 231 PCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFE 278
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 115/281 (40%), Gaps = 64/281 (22%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSA 121
Y +VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A
Sbjct: 17 YSDVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGA 76
Query: 122 LGAMYALNKG-------STLYIDLAKSNSRSKR-------SRTDDEWTGSDKKARGPSAF 167
A L T+ ++ AKSN++ + S T + F
Sbjct: 77 EAAKQDLQGVRFDPDLPQTIRLEFAKSNTKVSKPKQPAAASATAHPTLVHSLTGHLSAPF 136
Query: 168 SRGTADLGIG-----SVHMPG--MGNSAFN----------TIGYPHTQSHENFDARGGSL 210
G A+L S +PG + ++A ++ PH + + A
Sbjct: 137 FPGAAELWHHPALAYSAELPGAALQHAALVHPALHPQVPPSLSIPHPTALTSIHASLPHF 196
Query: 211 ITTAKFNNSSAPSGPKNVTP-CATLFVANLGPTCTEQELTQVFSK--------CPGFLKL 261
+ + + S + P C+TLFVANLG +E EL ++FS CP L +
Sbjct: 197 LPSPGLASPVGSSASQPANPPCSTLFVANLGQFVSEHELKEIFSSHNIVVVLLCPRRLSV 256
Query: 262 K---------------IQSTYGPPVAFVDFQVTCVCVCHIL 287
K + S A VD CVC IL
Sbjct: 257 KYGGGGEDAIREREKVMTSRNISQKALVD------CVCRIL 291
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+F++GLPEDVK RE+ NL R PGYE+S + + + P FA+FS Q A+ A
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQV--NFKGEHPMGFALFSTPQLAVAAK 104
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSRTDD 152
AL + S L+ ++AK N KR D
Sbjct: 105 DALQEMVFDAESKSVLHTEMAKKNLFVKRGIVAD 138
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ--VTCVCVCHIL 287
PC TLF+ NLG E+EL +FS PGF ++KI V F++F+ T V H L
Sbjct: 222 PCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSL 281
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 46 QPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQ 105
Q Q G Y + + VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + +
Sbjct: 29 QTQHDASGMYPEKGKGFEKFSAVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR 88
Query: 106 NSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSR 149
QP F +F + A A ALN TL ++ AK+N++ +S+
Sbjct: 89 --QPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSK 137
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 19 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAK 76
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 77 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 107
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 17 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 75 NALNGIRFDPESPQTLRLEFAKANTKMAKSK 105
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 32 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 89
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 90 NALNGIRFDPENPQTLRLEFAKANTKMAKNK 120
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 87 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 144
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 145 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 175
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 247 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 304
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 305 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 334
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 17 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 74
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 75 NALNGIRFDPESPQTLRLEFAKANTKMAKSK 105
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 30 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAK 87
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 88 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 118
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 58 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 115
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 116 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 145
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 82 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAK 139
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 140 NALNGIRFDPESPQTLRLEFAKANTKMAKSK 170
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 2 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 59
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 60 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 89
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKSK 109
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F FS + A
Sbjct: 84 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFSTRSGAE 143
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 144 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 176
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 78 NALNGIRFDPEIPQTLRLEFAKANTKMAKSK 108
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL I+ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRIEFAKANTKMAKNK 109
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 78 NALNGIRFDPEIPQTLRLEFAKANTKMAKSK 108
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A
Sbjct: 245 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAE 304
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 305 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 337
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A
Sbjct: 245 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAE 304
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 305 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 337
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
+ D+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A
Sbjct: 11 AVDDVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 68
Query: 124 AMYALN-------KGSTLYIDLAKSNSRSKRSR 149
A ALN TL ++ AK+N++ +++
Sbjct: 69 AKNALNGIRFDPEIPQTLRLEFAKANTKMAKNK 101
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
DEVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 79
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 80 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 112
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 219 SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
SS P+ + PC+TLFVANLG +E EL +FS PGF +L++ + G PVAFV++Q
Sbjct: 213 SSQPNIAVSNAPCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQ 271
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY--------------------GSYDEVRT 70
+V P P +P P P P L S AS P + S T
Sbjct: 168 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCST 227
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L
Sbjct: 228 LFVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQG 285
Query: 131 GSTLYID 137
L D
Sbjct: 286 SFLLSSD 292
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+ VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 3 ERVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 60
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 61 NALNGIRFDPENPQTLRLEFAKANTKMAKSK 91
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
DEVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 79
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 80 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 112
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 219 SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
SS P+ + PC+TLFVANLG +E EL +FS PGF +L++ + G PVAFV++Q
Sbjct: 213 SSQPNIAVSNAPCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQ 271
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY--------------------GSYDEVRT 70
+V P P +P P P P L S AS P + S T
Sbjct: 168 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCST 227
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L +
Sbjct: 228 LFVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFVEYQDVRYAAQAMATL-Q 284
Query: 131 GSTLY------IDLAKSNSRSKRSRTDDEWT-GSDKKARG 163
GS L I + + S+ + W GS ++ G
Sbjct: 285 GSFLLSSDRGAIRIEYAKSKMAEVGFTNLWIEGSKREENG 324
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 75 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 132
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 133 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 162
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 58
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 59 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 88
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 34 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 91
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 92 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 121
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 58
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 59 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 88
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + QP F +F + A A
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 58
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 59 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 88
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR + GYESS L+ +++N + P F FS + A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADE 88
Query: 124 AMYAL-------NKGSTLYIDLAKSNSRSKR 147
A AL + T+ ++LA+SN++ +
Sbjct: 89 ARKALQGVRFDPDNAQTIRLELARSNTKVSK 119
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
LFVANLG + E+EL QVF PGF +L++ + G VAFV++
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEY 300
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN 129
LFVA L + V E+ +FR FPG+ LR T+ AF + D + A AM +L
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGF--CRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQ 314
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 79 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 136
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 137 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 167
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR + GYESS L+ +++N + P F FS + A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADE 88
Query: 124 AMYAL-------NKGSTLYIDLAKSNSRSKR 147
A AL + T+ ++LA+SN++ +
Sbjct: 89 ARKALQGVRFDPDNAQTIRLELARSNTKVSK 119
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 234 LFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
LFVANLG + E+EL QVF PGF +L++ + G VAFV++
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEY 300
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN 129
LFVA L + V E+ +FR FPG+ LR T+ AF + D + A AM +L
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGF--CRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQ 314
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 78 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 108
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 78 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 108
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVF------SDQQSA 121
VRTLFV+GLP DVKPRE+Y LFR F GYE S L+ + + QP AF F SD +S
Sbjct: 1 VRTLFVSGLPLDVKPREVYLLFRSFKGYEGSLLKLT--DKQPVAFVTFENKDCASDAKSE 58
Query: 122 L-GAMYALNKGSTLYIDLAKSNSR 144
L G + + TL ++ AKSN++
Sbjct: 59 LQGVQFDPDVSQTLRLEFAKSNTK 82
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 58
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 59 ALNGIRFDPENPQTLRLEFAKANTKMAKNK 88
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A A
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPDNPQTLRLEFAKANTKMAKSK 87
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S +VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A
Sbjct: 1 SLPQVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEA 58
Query: 124 AMYALN-------KGSTLYIDLAKSNSRSKRSR 149
A ALN TL ++ AK+N++ +++
Sbjct: 59 AKNALNGIRFDPENPQTLRLEFAKANTKMAKNK 91
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 60 PAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQ 119
P + VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F +
Sbjct: 110 PHLCALGSVRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRA 167
Query: 120 SALGAMYALN-------KGSTLYIDLAKSNSRSKRSR 149
A A ALN TL ++ AK+N++ +S+
Sbjct: 168 GAEVAKNALNGIRFDPENPQTLRLEFAKANTKMAKSK 204
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAKSK 87
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A
Sbjct: 77 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAE 136
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 137 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 169
>gi|442619723|ref|NP_001014631.3| couch potato, isoform T [Drosophila melanogaster]
gi|442619727|ref|NP_001163640.2| couch potato, isoform V [Drosophila melanogaster]
gi|440217576|gb|AAX52961.3| couch potato, isoform T [Drosophila melanogaster]
gi|440217578|gb|ACZ94936.2| couch potato, isoform V [Drosophila melanogaster]
Length = 607
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 499 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 531
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|442619719|ref|NP_732282.6| couch potato, isoform R [Drosophila melanogaster]
gi|440217574|gb|AAF55483.7| couch potato, isoform R [Drosophila melanogaster]
Length = 749
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 499 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 531
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFS 253
NN+S P P+ PC+TLFVANLG +E EL +VFS
Sbjct: 698 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFS 736
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 24 KVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 81
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 82 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 111
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 78 NALNGVRFDPEIPQTLRLEFAKANTKMAKNK 108
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 8 KVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 65
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 66 ALNGIRFDPENPQTLRLEFAKANTKMAKNK 95
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 79 NALNGIRFDPEIPQTLRLEFAKANTKMAKNK 109
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 2 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 59
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 60 ALNGIRFDPENPQTLRLEFAKANTKMAKNK 89
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 78 NALNGVRFDPEIPQTLRLEFAKANTKMAKNK 108
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F+ + A
Sbjct: 23 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAE 82
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 83 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 115
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 20 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 77
Query: 126 YALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 78 NALNGVRFDPEIPQTLRLEFAKANTKMAKNK 108
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A A
Sbjct: 1 VRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAKSK 87
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 27 KVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 84
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 85 ALNGIRFDPENPQTLRLEFAKANTKMAKSK 114
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 58
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +S+
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAKSK 87
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 26 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 85
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 86 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 118
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQS 265
NN++ P P+ PC+TLFVANLG +E EL +VFS PGF +L++ +
Sbjct: 261 NNATHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHT 311
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 106 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 163
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 164 ALNGIRFDPENPQTLRLEFAKANTKMAKNK 193
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A A
Sbjct: 91 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 148
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 149 LNGIRFDPENPQTLRLEFAKANTKMAKNK 177
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
+ VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A
Sbjct: 22 FVRVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAA 79
Query: 125 MYALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 80 KNALNGIRFDPENPQTLRLEFAKANTKMAKNK 111
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A A
Sbjct: 116 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 173
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 174 LNGIRFDPENPQTLRLEFAKANTKMAKNK 202
>gi|413942879|gb|AFW75528.1| hypothetical protein ZEAMMB73_795624, partial [Zea mays]
Length = 210
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 216 FNNSSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVD 275
+N ++ PC+T+F+ANLG TCTE EL +V SK PGF LK++ G PVAF D
Sbjct: 112 LSNEGRDKSSSDIPPCSTIFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFAD 171
Query: 276 FQ--VTCVCVCHILFSLLFKEKLSDGISSNWDQWRLR 310
F + + L + +DG+ + + ++R
Sbjct: 172 FTDIESSTAAMNRLQGTVLASSDNDGLHIEYARSKMR 208
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A A
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAKNK 105
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 524 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 583
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 584 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 616
>gi|313231469|emb|CBY08583.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
S D VRTL++AGLP DVK REI NLF+ P +E + ++SS + P AFA FS ++A
Sbjct: 113 NSEDGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAK 172
Query: 123 GA--------MYALNKGSTLYIDLAKSNSRSK 146
A M N L ID AKSN++++
Sbjct: 173 SAKLEYSGYQMDIDNAELKLKIDFAKSNTKNR 204
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 26 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 85
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 86 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 118
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 54 SYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFA 113
S+ + P+ +VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F
Sbjct: 65 SHQSGLPSSCPRLQVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFV 122
Query: 114 VFSDQQSALGAMYALNKG-------STLYIDLAKSNSRSKRSR 149
F + A A ALN TL ++ AK+N++ +++
Sbjct: 123 SFDSRSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNK 165
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A A
Sbjct: 24 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 81
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 82 LNGIRFDPENPQTLRLEFAKANTKMAKNK 110
>gi|195107387|ref|XP_001998295.1| GI23706 [Drosophila mojavensis]
gi|193914889|gb|EDW13756.1| GI23706 [Drosophila mojavensis]
Length = 609
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 441 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 500
Query: 123 GAMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 501 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 533
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 59 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 116
Query: 127 ALNKG-------STLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 117 ALNGIRFDPEIPQTLRLEFAKANTKMAKSK 146
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F FS + A
Sbjct: 8 QVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFSTRSGAEA 67
Query: 124 AMYALNKG--------STLYIDLAKSNSRSKRSR 149
A L +G T+ ++ AKSN++ + +
Sbjct: 68 AKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPK 101
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 12 KVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 69
Query: 127 ALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +S+
Sbjct: 70 ALNGIRFDPEIPQTLRLEFAKANTKMAKSK 99
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A A
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAKNK 105
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A A
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAKNK 105
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A A
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAKNK 105
>gi|356526326|ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
Length = 318
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 112/291 (38%), Gaps = 58/291 (19%)
Query: 10 GLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVR 69
G+H + Q PPP +A P +EVR
Sbjct: 5 GIHPYHQQ------------------------WAPAAAAPPPPPPAAAGGPPPHPGEEVR 40
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYAL- 128
T+F+ GLPEDVK RE+ NL R PG+E+S L + +P FA+FS AL A L
Sbjct: 41 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAE--KPMGFALFSAPHQALTAKDILQ 98
Query: 129 ------NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTADLGIGSVHMP 182
+ S L+ ++AK N KR G+D A S R D P
Sbjct: 99 DMLFDPDTKSVLHTEMAKKNLFVKRG------IGADAGAFDQSKRLRTAGDYTHTGYTSP 152
Query: 183 GMGNSAFNTIGYPHTQSHENFDARGGS----------LITTAKFNNSSAPS------GPK 226
+ + PH + T A +APS K
Sbjct: 153 SPFHPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPTPAPI---AAPSTYVPVQNTK 209
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 210 DNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFE 260
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 3 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 60
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 61 ALNGIRFDPEIPQTLRLEFAKANTKMAKNK 90
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 1 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 58
Query: 127 ALN-------KGSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 59 ALNGIRFDPEIPQTLRLEFAKANTKMAKNK 88
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 14/98 (14%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQ------NSQPFAFAVFSDQQSA 121
VRTLFV+GLP DVK R+++ LFR PGY S L++ST+ S P AFA F ++ A
Sbjct: 15 VRTLFVSGLPVDVKQRDLHLLFRGLPGYLDSILKTSTKQPGHGNKSGPVAFATFETRELA 74
Query: 122 LGAMYALN--------KGSTLYIDLAKSNSRSKRSRTD 151
A L S L +D AKSN++S RSR +
Sbjct: 75 NEAKAILQGFQFDPDVTDSHLRVDFAKSNTKSYRSRHN 112
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYG-PPVAFVDF 276
C+TLFVANLG T++EL +F +C GF +L++ G P AF++F
Sbjct: 205 CSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKKPGFPTTAFIEF 251
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 12 KVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 69
Query: 127 ALNK-------GSTLYIDLAKSNSRSKRSR 149
ALN TL ++ AK+N++ +++
Sbjct: 70 ALNGIRFDPEIPQTLRLEFAKANTKMAKNK 99
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 2 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 59
Query: 128 LN-------KGSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 60 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 88
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F FS + A A
Sbjct: 19 QVRTLFVSGLPMDIKPRELYLLFRPFQGYEGSLIKFTSK--QPVGFVSFSSRSEAEAAKN 76
Query: 127 ALNKG-------STLYIDLAKSNSRSKRSRTD 151
LN TL ++ AK+N++ R ++
Sbjct: 77 RLNGVRFDPDVPQTLRLEFAKANTKMSRRNSN 108
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 30 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 87
Query: 128 LNKG-------STLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 88 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 116
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNKG-------STLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 72 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 129
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 130 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 158
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 62 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 119
Query: 128 LNK-------GSTLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 120 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 148
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 7 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 64
Query: 128 LNKG-------STLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 65 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 93
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYA 127
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A A
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 128 LNKG-------STLYIDLAKSNSRSKRSR 149
LN TL ++ AK+N++ +++
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAKNK 87
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 15 KVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEA 74
Query: 124 AMYALNKG--------STLYIDLAKSNSRSKR 147
A L +G T+ ++ AKSN++ +
Sbjct: 75 AKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 106
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 225 PKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
P + PC+TLFVANLG +E EL ++FS C GF +L++ + PVAFV+F
Sbjct: 217 PAHTAPCSTLFVANLGQFVSEHELKEIFSSCSGFNRLRLMTGGNGPVAFVEF 268
>gi|194900318|ref|XP_001979704.1| GG22582 [Drosophila erecta]
gi|190651407|gb|EDV48662.1| GG22582 [Drosophila erecta]
Length = 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A A
Sbjct: 63 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 122
Query: 125 MYALNKG--------STLYIDLAKSNSRSKR 147
L +G T+ ++ AKSN++ +
Sbjct: 123 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPV 271
NN+S P P+ PC+TLFVANLG +E EL +VFS PGF +L++ + P+
Sbjct: 305 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKGTHPI 361
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F ++ A A
Sbjct: 18 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAK 75
Query: 126 YALN 129
ALN
Sbjct: 76 NALN 79
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQS 265
NN+S P P+ PC+TLFVANLG +E EL +VFS PGF +L++ +
Sbjct: 697 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHT 747
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKRSR 149
A L + T+ ++ AKSN++ + +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPK 532
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVF 252
NN+S P P+ PC+TLFVANLG +E EL +VF
Sbjct: 697 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVF 734
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 448 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 507
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKRSR 149
A L + T+ ++ AKSN++ + +
Sbjct: 508 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPK 541
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFS 253
NN+S P P+ PC+TLFVANLG +E EL +VFS
Sbjct: 687 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFS 725
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKRSR 149
A L + T+ ++ AKSN++ + +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPK 532
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFS 253
NN+S P P+ PC+TLFVANLG +E EL +VFS
Sbjct: 697 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFS 735
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQ 119
G+ +VRTLFV+GLP D KPRE+Y LFR F GY SS L+ + +N + P F F ++
Sbjct: 85 GTEHQVRTLFVSGLPLDAKPRELYLLFRSFKGYLSSTLKPAGKNGKLTAPVGFVTFESRE 144
Query: 120 SALGAMYAL-------NKGSTLYIDLAKSNSRSKRSRT 150
A AM L + + ++ A+SN++ + +T
Sbjct: 145 QAEEAMSKLQGVKFDPDGNQHMRLEFARSNTKVTKPKT 182
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 448 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 507
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 508 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 539
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGF 258
NN+S P P+ PC+TLFVANLG +E EL +VFS+ G
Sbjct: 697 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSRGAGM 740
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 457 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 516
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 517 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 548
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPV 271
NN+S P P+ PC+TLFVANLG +E EL +VFS PGF +L++ + P+
Sbjct: 700 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKGTHPI 756
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A A
Sbjct: 56 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFQTRAGAEAA 115
Query: 125 MYALNKG--------STLYIDLAKSNSRSKR 147
L +G T+ ++ AKSN++ +
Sbjct: 116 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 146
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVF------- 115
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F
Sbjct: 450 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 509
Query: 116 SDQQSALGAMYALNKGSTLYIDLAKSNSRSKRSR 149
+ +Q G + + T+ ++ AKSN++ + +
Sbjct: 510 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPK 543
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
+EVRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 21 EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAK 78
Query: 126 YALNKGS 132
ALN S
Sbjct: 79 NALNMSS 85
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A A
Sbjct: 15 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 74
Query: 125 MYALNKG--------STLYIDLAKSNSRSKR 147
L +G T+ ++ AKSN++ +
Sbjct: 75 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 105
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 219 SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ- 277
SS P+ + PC+TLFVANLG +E EL +FS PGF +L++ + G PVAFV++Q
Sbjct: 206 SSQPNIAVSNAPCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQD 265
Query: 278 --VTCVCVCHILFSLLF------------KEKLSD-GISSNWDQW-RLRSWIQSFKCVEF 321
+ + S L K K+++ G ++ W +W R R I C
Sbjct: 266 VRYAAQAMATLQGSFLLSSDRGAIRIEYAKSKMAEVGFTNLWIEWRRYRQRITKMVCALR 325
Query: 322 AK 323
A+
Sbjct: 326 AR 327
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY--------------------GSYDEVRT 70
+V P P +P P P P L S AS P + S T
Sbjct: 161 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCST 220
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L
Sbjct: 221 LFVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQG 278
Query: 131 GSTLYID 137
L D
Sbjct: 279 SFLLSSD 285
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 465 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 524
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSRSKR 147
A L + T+ ++ AKSN++ +
Sbjct: 525 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 556
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVF------- 115
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F
Sbjct: 26 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 85
Query: 116 SDQQSALGAMYALNKGSTLYIDLAKSNSRSKR 147
+ +Q G + + T+ ++ AKSN++ +
Sbjct: 86 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 117
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR GYE + L+ +++N + P F F QQ A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQD 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKR 147
A L L ++LAKSN++ R
Sbjct: 89 ARKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
+ + C+TLFVANL E +L VF GF +L++ + G VAFV++
Sbjct: 216 STSACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 265
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALG 123
+VRTLFV+GLP D KPRE+Y LFR GYE + L+ +++N + P F F QQ A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQD 88
Query: 124 AMYALNK-------GSTLYIDLAKSNSRSKR 147
A L L ++LAKSN++ R
Sbjct: 89 AKKLLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 229 TPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
+ C+TLFVANL E +L VF GF +L++ + G VAFV++
Sbjct: 226 SACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 273
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYAL 128
TLFVA L +V ++ +F+ F G+ + LR +N AF +SD Q A AM +L
Sbjct: 230 TLFVANLSAEVNEDQLRGVFKAFSGF--TRLRLHNKNGSCVAFVEYSDLQKATQAMMSL 286
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 26 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 85
Query: 123 GAMYAL-------NKGSTLYIDLAKSNSR 144
A L + T+ ++ AKSN++
Sbjct: 86 AAKQDLQGVRFDPDMPQTIRLEFAKSNTK 114
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFA---FAVFSDQQSALG 123
+VRT+FV+GLP D KPRE+Y LFR F GY+SS L+ + +N +P A F F ++ A
Sbjct: 80 QVRTIFVSGLPLDAKPRELYLLFRGFKGYQSSTLKPAGKNGKPTAPVGFVTFDSREQAED 139
Query: 124 AMYALN------KGSTLY-IDLAKSNSRSKR 147
AM L +G+ L ++ A++N++ +
Sbjct: 140 AMRKLQGVKFDPEGNQLMRLEFARTNTKVTK 170
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSST---QNSQPFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ ++ +N P F F + A A
Sbjct: 12 VRTLFVSGLPMDAKPRELYLLFRAYQGYEGSLLKVTSKPGKNQSPVGFVTFESRAGAEAA 71
Query: 125 MYALNKG-------STLYIDLAKSNSR 144
AL T+ ++ AKSN++
Sbjct: 72 KQALQGVRFDPELPQTIRLEFAKSNTK 98
>gi|302811155|ref|XP_002987267.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
gi|300144902|gb|EFJ11582.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
Length = 350
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRT+FV G P DVK RE+ NL R +PGYE+S + + + QP FA+FS A+ A
Sbjct: 1 QVRTIFVLGFPPDVKERELQNLLRWWPGYEASQM--NFKGDQPMGFALFSTASMAMAARD 58
Query: 127 ALNKGSTLYIDLAKSNSRSKRSRTD 151
AL + ++ AKS R++ ++ +
Sbjct: 59 ALQASNLVFDADAKSVLRAEMAKKN 83
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSK-C----PGFLKLKIQSTYGPPVAFVDF 276
K+ PC TLF+ NLG +E EL +FS+ C PGF ++K+ V F++F
Sbjct: 189 KDNPPCNTLFIGNLGEATSEAELRGLFSRQCPCSQPGFRQMKVLRQGRSTVCFIEF 244
>gi|302789375|ref|XP_002976456.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
gi|300156086|gb|EFJ22716.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
Length = 350
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
+VRT+FV G P DVK RE+ NL R +PGYE+S + + + QP FA+FS A+ A
Sbjct: 1 QVRTIFVLGFPPDVKERELQNLLRWWPGYEASQM--NFKGDQPMGFALFSTASMAMAARD 58
Query: 127 ALNKGSTLYIDLAKSNSRSKRSRTD 151
AL + ++ AKS R++ ++ +
Sbjct: 59 ALQASNLVFDADAKSVLRAEMAKKN 83
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSK-C----PGFLKLKIQSTYGPPVAFVDF 276
K+ PC TLF+ NLG +E EL +FS+ C PGF ++K+ V F++F
Sbjct: 189 KDNPPCNTLFIGNLGEATSEAELRGLFSRQCLCSQPGFRQMKVLRQGRSTVCFIEF 244
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMY 126
VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A
Sbjct: 5 RVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKN 62
Query: 127 ALNKGS 132
ALN S
Sbjct: 63 ALNMSS 68
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVF-------SD 117
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F +
Sbjct: 56 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 115
Query: 118 QQSALGAMYALNKGSTLYIDLAKSNSRSKR 147
+Q G + + T+ ++ AKSN++ +
Sbjct: 116 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 145
>gi|1345458|emb|CAA78664.1| Cpo 61.2 [Drosophila melanogaster]
Length = 536
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN---SQPFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 449 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 508
Query: 123 GA 124
A
Sbjct: 509 AA 510
>gi|7512025|pir||B46230 RNA-binding protein homolog Cpo (clone 61.2) - fruit fly
(Drosophila melanogaster)
Length = 536
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN---SQPFAFAVFSDQQSAL 122
+EVRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + P F F + A
Sbjct: 449 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 508
Query: 123 GA 124
A
Sbjct: 509 AA 510
>gi|307110907|gb|EFN59142.1| hypothetical protein CHLNCDRAFT_19159, partial [Chlorella
variabilis]
Length = 382
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFA-FAVFSDQQSALGA 124
DEVRT+F++G PEDV+ RE+ N+ R PGYE+S + +Q FA FA S ++A+ A
Sbjct: 2 DEVRTVFISGFPEDVRERELNNMLRFLPGYEASQMHFRNGQAQGFALFASGSLARAAVDA 61
Query: 125 MYAL--NKGSTLYIDLAKSNSRSKR 147
+ L + L ++A N ++R
Sbjct: 62 IQNLVFDNDCVLRAEMAHKNMCARR 86
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 223 SGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
S K+ PC TLF+ NLG + +E E+ +F PGF +LK+ F+++
Sbjct: 169 SNTKDNPPCNTLFIGNLGDSVSEAEMRGLFGHQPGFQQLKLVRGQKGMSCFIEY 222
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Query: 72 FVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-- 129
FV+GLP D+KPRE+Y LFR F GYE S ++ +++ QP F +F + A A ALN
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNALNGI 58
Query: 130 -----KGSTLYIDLAKSNSRSKRSR 149
TL ++ AK+N++ +++
Sbjct: 59 RFDPENPQTLRLEFAKANTKMAKNK 83
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 220 SAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVT 279
SA G N PC+TLFVANLG +EQEL ++F PG+ +L++ + G PVAFV++
Sbjct: 175 SAMGGGANA-PCSTLFVANLGQFVSEQELKELFGSFPGYCRLRMHNKGGAPVAFVEY-AD 232
Query: 280 CVCVCHILFSL 290
C L SL
Sbjct: 233 VRCAAQALISL 243
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN 129
TLFVA L + V +E+ LF FPGY LR + P AF ++D + A A+ +L
Sbjct: 187 TLFVANLGQFVSEQELKELFGSFPGY--CRLRMHNKGGAPVAFVEYADVRCAAQALISLQ 244
Query: 130 KGSTLYIDLAKSNSRSKRSRTDDEWTG 156
T + + R + +R TG
Sbjct: 245 --GTYLLSSDRGGVRIEYARNKMAETG 269
>gi|312371573|gb|EFR19722.1| hypothetical protein AND_21916 [Anopheles darlingi]
Length = 516
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 63 GSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSAL 122
G + VRTLFV+GLP D KPRE+Y LFR + GYE S L+ +++N + ++
Sbjct: 36 GKFHSVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNG----------KTASQ 85
Query: 123 GAMYALNKGSTLYIDLAKSNSRSKR 147
G + + T+ ++ AKSN++ +
Sbjct: 86 GVRFDPDMPQTIRLEFAKSNTKVSK 110
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQS 265
PC+TLFVANLG +E EL ++F+ PGF +L++ +
Sbjct: 216 PCSTLFVANLGQFVSEHELKEIFASLPGFCRLRLHT 251
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN----SQPFAFAVFSDQQSALG 123
VRTLFV+GLP D K RE+Y LFR GYE+S LR + + P F FS + A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDAEI 97
Query: 124 AMYALNK-------GSTLYIDLAKSNSR 144
AM AL G + ++ AKSN++
Sbjct: 98 AMKALQSALFDPITGHKIRLEKAKSNTK 125
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLR 101
VRTLFV+GLP D K RE+Y LFR GYE+S LR
Sbjct: 379 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLR 412
>gi|241686636|ref|XP_002412834.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
gi|215506636|gb|EEC16130.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
Length = 144
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN---SQPFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYE S L+ + +N S P F FS + A A
Sbjct: 75 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVTFSSRAGAEAA 134
Query: 125 MYALNK 130
L +
Sbjct: 135 KQELQE 140
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQS 120
S EVRTLFV+GLP D KPREIY +FR + GY+ S L+ + + + P AF F +++
Sbjct: 22 SQQEVRTLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKEGKKATPVAFVTFENREQ 81
Query: 121 A-------LGAMYALNKGSTLYIDLAKSNSRSKR 147
A G + +++ I+ AK+N++ +
Sbjct: 82 AEVCKAELQGIRFDPELPTSIRIEFAKANTKVTK 115
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYG-PPVAFVDF 276
C TLFVANLG TE EL +F + P F +LK+ G PV+FV++
Sbjct: 230 CTTLFVANLGYNTTEDELKNMFGRIPSFRRLKMLRNKGTTPVSFVEY 276
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 58 SFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN----SQPFAFA 113
+ P + VRTLFV+GLP D K RE+Y LFR GYE+S LR + + P F
Sbjct: 28 AVPNITGNEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFV 87
Query: 114 VFSDQQSALGAMYALNK-------GSTLYIDLAKSNSR 144
FS + A AM AL G + ++ AKSN++
Sbjct: 88 TFSSAEDAEIAMKALQSALFDPITGHKIRLEKAKSNTK 125
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
C+TLFVANLG TE EL VF PGF +L++ + VAFV+F+
Sbjct: 280 CSTLFVANLGDGVTEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFR 326
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSAL 122
+EVRTLFV+GLP D K RE+Y LFR F GYE S +R++ + + P F F + A
Sbjct: 79 EEVRTLFVSGLPADAKKRELYLLFRGFTGYEGSIIRTTAKPGKAPVPVGFVTFDSRGEAD 138
Query: 123 GAMYALNKGS-------TLYIDLAKSNSRSK 146
A +L TL ++ AK+N++ K
Sbjct: 139 LAKNSLQGIKFDPELPHTLRLEFAKANTKVK 169
>gi|313242687|emb|CBY39480.1| unnamed protein product [Oikopleura dioica]
Length = 196
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 64 SYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALG 123
S D VRTL++AGLP DVK REI NLF+ P +E + ++SS + P AFA FS ++A
Sbjct: 114 SEDGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAKS 173
Query: 124 A 124
A
Sbjct: 174 A 174
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 68 VRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGA 124
VRTLFV+GLP D KPRE+Y LFR + GYESS L+ + +N + P F F+ + +A A
Sbjct: 1 VRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEEA 60
Query: 125 MYALNKGST-------LYIDLAKSNSR 144
+L + ++ A+SN++
Sbjct: 61 KQSLQGVKFDPELPQPIRLEFARSNTK 87
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 59 FPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN----SQPFAFAV 114
P + VRTLFV+GLP D K RE+Y LFR GYE+S LR + + P F
Sbjct: 29 VPNVAGSEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVT 88
Query: 115 FSDQQSALGAMYALNK-------GSTLYIDLAKSNSR 144
FS + A AM L G + ++ AKSN++
Sbjct: 89 FSSAEDADIAMKTLQSVLFDPTTGHKIRLEKAKSNTK 125
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
C+TLFVANLG TE EL VF PGF +L++ + VAFV+F+
Sbjct: 309 CSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFR 355
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 59 FPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQN----SQPFAFAV 114
P + VRTLFV+GLP D K RE+Y LFR GYE+S LR + + P F
Sbjct: 29 VPNVAGSEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVT 88
Query: 115 FSDQQSALGAMYALNK-------GSTLYIDLAKSNSR 144
FS + A AM L G + ++ AKSN++
Sbjct: 89 FSSAEDADIAMKTLQSVLFDPTTGHKIRLEKAKSNTK 125
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
C+TLFVANLG TE EL VF PGF +L++ + VAFV+F+
Sbjct: 309 CSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFR 355
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 56 SASFPAYGSY--DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ----- 108
+ + ++ SY DEVRTLFV+GLP DVK RE+ LFR + G+ES+ L+ + +
Sbjct: 65 NGDYKSHESYQNDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIA 124
Query: 109 PFAFAVFSDQQSA-------LGAMYALNKGSTLYIDLAKSNSRSK 146
P AF F + A G + + +TL ++ AKSN++++
Sbjct: 125 PVAFVTFKSKAEAQVPKEELQGEKFDNDNPTTLRLEFAKSNTKNR 169
>gi|307184926|gb|EFN71193.1| Protein couch potato [Camponotus floridanus]
Length = 358
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 219 SSAPSGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
SS P+ + C+TLFVANLG +E EL +FS PGF +L++ + G PVAFV++Q
Sbjct: 182 SSQPNIAVSNAQCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQ 240
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 79 DVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGAMYALNKG---- 131
D KPRE+Y LFR + GYE S L+ +++N + P F F + A A L +G
Sbjct: 2 DTKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQQGVRFD 61
Query: 132 ----STLYIDLAKSNSRSKR 147
T+ ++ AKSN++ +
Sbjct: 62 PDMPQTIRLEFAKSNTKVSK 81
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY--------------------GSYDEVRT 70
+V P P +P P P P L S AS P + S + T
Sbjct: 137 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAQCST 196
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNK 130
LFVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L
Sbjct: 197 LFVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQG 254
Query: 131 GSTLYID 137
L D
Sbjct: 255 SFLLSSD 261
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 56 SASFPAYGSY--DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ----- 108
+ + ++ SY DEVRTLFV+GLP DVK RE+ LFR + G+ES+ L+ + +
Sbjct: 48 NGDYKSHESYHNDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIA 107
Query: 109 PFAFAVFSDQQSA-------LGAMYALNKGSTLYIDLAKSNSRSK 146
P AF F + A G + + +TL ++ AKSN++++
Sbjct: 108 PVAFVTFKSKAEAQVPKEELQGEKFDNDNPTTLRLEFAKSNTKNR 152
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 229 TPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
+PC+TLFVANLG +EQEL +F+ GF +L++ + G PVAFV+FQ
Sbjct: 214 SPCSTLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNKGGSPVAFVEFQ 262
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 79 DVKPREIYNLFREFPGYESSHLRSSTQNSQ---PFAFAVFSDQQSALGAMYALNKG---- 131
D KPRE+Y LFR + GYE S L+ + +N + P F FS + +A A L
Sbjct: 2 DAKPRELYLLFRAYKGYEGSLLKVTNKNGKNTSPVGFVTFSSRSAAEAAKQDLQGVRFDP 61
Query: 132 ---STLYIDLAKSNSRSKR 147
TL ++ AKSN++ +
Sbjct: 62 DLPQTLRLEFAKSNTKVTK 80
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 58 SFPAYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSD 117
S A+ S TLFVA L + +E+ +LF F G+ S LR + P AF F D
Sbjct: 206 SMAAHTSNSPCSTLFVANLGQFSSEQELKDLFNSFQGF--SRLRMHNKGGSPVAFVEFQD 263
Query: 118 QQSALGAMYALN 129
+ A AM L
Sbjct: 264 VRQAAEAMGRLQ 275
>gi|307202627|gb|EFN81948.1| Protein couch potato [Harpegnathos saltator]
Length = 189
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 231 CATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
C+TLFVANLG +E EL +FS PGF +L++ + G PVAF+++Q
Sbjct: 90 CSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFIEYQ 136
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 23/141 (16%)
Query: 33 VVAPPTQPYMPQPQ--PQPPPLGSYSASFPAY-------------------GSYDEVRTL 71
+V P P +P P P P L S AS P + + TL
Sbjct: 34 LVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAGNAQCSTL 93
Query: 72 FVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALNKG 131
FVA L + V E+ ++F FPG+ S LR T+ P AF + D + A AM L
Sbjct: 94 FVANLGQFVSEHELKDIFSSFPGF--SRLRMHTKGGSPVAFIEYQDVRYAAQAMATLQGS 151
Query: 132 STLYIDLAKSNSRSKRSRTDD 152
L D +S+ +
Sbjct: 152 FLLSSDRGAIRIEYAKSKMAE 172
>gi|384253459|gb|EIE26934.1| hypothetical protein COCSUDRAFT_12206, partial [Coccomyxa
subellipsoidea C-169]
Length = 253
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM 125
DEVRT+FV G P DVK RE+ N+ R GYE+S + +N FA+F+ ++A A+
Sbjct: 1 DEVRTVFVTGFPADVKERELNNMLRFVHGYEASQMH--WKNGLAQGFALFTHGEAARMAI 58
Query: 126 YAL-----NKGSTLYIDLAKSN 142
++ + G+ L ++A+ N
Sbjct: 59 SSIHNLVFDDGAILRCEMARKN 80
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
PC TLF+ NL E EL +F PGF +LK+ FV+F
Sbjct: 140 PCNTLFIGNLSENTNEDELRGLFVGQPGFRQLKLVRGARSVTCFVEF 186
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 16/95 (16%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQ--------PFAFAVFSD 117
+E+RTLFV+GLP+DVK RE Y LF+ F G+E + ++ +N + P AF F+
Sbjct: 41 EELRTLFVSGLPQDVKEREFYLLFQGFSGFECAIVKQPVRNVKLPNNQPLGPVAFLTFAS 100
Query: 118 QQSALGAM-----YALN---KGSTLYIDLAKSNSR 144
++ A A +AL+ + I+ AK+N++
Sbjct: 101 RKDAETAKDKFHGFALDPQVDNLVMKIEFAKANTK 135
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 71 LFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAM----- 125
LF+A +P +V E + F PGY S+ LR +N F FSD +SA A
Sbjct: 48 LFIAEIPLEVTEAEFRSTFSSEPGYISARLRRD-RNENTVGFVEFSDHKSAAEAREQFNN 106
Query: 126 --YALNKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSRGTAD-----LGIGS 178
++ N + I A +SR+K DD + PS+ +G + G GS
Sbjct: 107 FKFSHNDDHGITIHFAHEHSRNKHRERDDGKHYGSQHYDQPSSSRKGYNNGGYRHDGYGS 166
Query: 179 VHMPGMGNSAFNTIGYPHTQSH--------ENFDARGGSLITT----AKFNNSSAPSGPK 226
+ + + T G P + D G +T A+F + P
Sbjct: 167 MRAADVNSRVSLTSGLPLVPMGVSPMMPGPTSLDMSGMQFYSTVAPNAQFASYVQPQAYS 226
Query: 227 -NVTPCA--TLFVANLGPTCTEQELTQVFSKCPGFLKLKIQ 264
++P A TL+V L TE+E+ +F + PG+L ++I+
Sbjct: 227 PQLSPDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIK 267
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQP-----FAFAVFSDQQS 120
D TL+V GLP D RE+ ++FR+ PGY ++ P + F + +
Sbjct: 232 DAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNLCWVEFETKYN 291
Query: 121 ALGAM-----YALNKGST--LYIDLAKSNSRSKR 147
A A+ Y ++K T L I AK+ + +R
Sbjct: 292 AAVALHHLKGYKMDKNDTKGLTISYAKTTRKERR 325
>gi|413918505|gb|AFW58437.1| hypothetical protein ZEAMMB73_336478 [Zea mays]
Length = 242
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 19 PPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPE 78
P PP P G A P + + QP P+ S A DEV T+F+ LP
Sbjct: 38 PLAAPPVPTVAIHGGCATPARVHDLGHQPTASPVPGASDIVAA----DEVCTIFM-DLPA 92
Query: 79 DVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA-------MYALNKG 131
DVK RE++NL G+E+S + + + +QP FA+FS A+ A ++
Sbjct: 93 DVKERELHNLLCWLLGFETSEM--NFKGNQPMGFALFSTVHQAITAKAMFQDTVFDAETK 150
Query: 132 STLYIDLAKSNSRSKR 147
L D+AK N KR
Sbjct: 151 VALQTDMAKKNLFVKR 166
>gi|302842092|ref|XP_002952590.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
gi|300262229|gb|EFJ46437.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
Length = 257
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSS-TQNSQPFAFAVFSDQQSALGA 124
+E+RT+FV G P +V RE++NL PGYE+S + + + P FA+FS A A
Sbjct: 1 EEIRTIFVTGFPSNVHERELHNLVCFLPGYEASQMNTKPATGTAPQGFALFSSHAHAQAA 60
Query: 125 MYALN 129
M L+
Sbjct: 61 MLTLH 65
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
PC TLF+ NLG T E EL QVF PG+ +LK+ FV+F
Sbjct: 173 PCNTLFIGNLGDTVDENELMQVFGNQPGYKQLKLLRHPRQVSCFVEF 219
>gi|395746852|ref|XP_003780695.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein with multiple
splicing 2 [Pongo abelii]
Length = 232
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPF 110
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ + + F
Sbjct: 70 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQGIRF 113
>gi|284005979|gb|ADB57051.1| MIP15437p [Drosophila melanogaster]
Length = 299
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 217 NNSSAPSGPKNVT--PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQS 265
NN+S P P+ PC+TLFVANLG +E EL +VFS PGF +L++ +
Sbjct: 34 NNASHPGNPQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHT 84
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 66 DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLR-----------SSTQN--SQPFAF 112
+++ T+FV G PED++ RE N+F G+E++ L+ +ST N Q F
Sbjct: 35 EDISTIFVVGFPEDMQEREFQNMFMFSSGFEAATLKVPSSKDGEEDMTSTSNIKKQIIGF 94
Query: 113 AVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKRSRTDDEW 154
A F ++ A+ A LN KG+TL ++AK N +K++ + +
Sbjct: 95 AKFRTRKEAIEAKDTLNGRKIDAEKGNTLKAEMAKKNLHTKKANNNGDH 143
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TL+V NL P E+EL +FSKC G+ +L ++ P+ FV+F+
Sbjct: 378 PCNTLYVGNLPPDANEEELKSMFSKCAGYKRLSFRNKSNGPMCFVEFE 425
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 79 DVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYALN-------KG 131
D+KPRE+Y LFR F GYE S ++ +++ QP F F + A A ALN
Sbjct: 2 DIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRTGAEAAKNALNGIRFDPENP 59
Query: 132 STLYIDLAKSNSRSKRSR 149
TL ++ AK+N++ +S+
Sbjct: 60 QTLRLEFAKANTKMAKSK 77
>gi|47203440|emb|CAG13908.1| unnamed protein product [Tetraodon nigroviridis]
Length = 41
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 67 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQ 105
+VRTLFV+GLP D+KPRE+Y LFR F GYE S ++ +++
Sbjct: 1 KVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK 39
>gi|356521751|ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
Length = 320
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 50/171 (29%)
Query: 10 GLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVR 69
G+H + Q P PP +A P +EVR
Sbjct: 5 GIHPYHQQW-------------------------APAAAAPPPPPAAAGGPPPHPGEEVR 39
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGAMYAL- 128
T+F+ GLPEDVK RE+ NL R PG+E+S L + +P FA+FS AL A L
Sbjct: 40 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAE--KPMGFALFSAPHQALAAKDILQ 97
Query: 129 ------NKGSTLYIDLAKSN----------------SRSKRSRTDDEWTGS 157
+ S L+ ++AK N +SKR RT ++T S
Sbjct: 98 DMLFDPDTKSVLHTEMAKKNLFVKRGIGAADAGGAFDQSKRLRTAGDYTHS 148
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG E+E+ +FS PGF ++KI V F++F+
Sbjct: 211 KDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFE 262
>gi|357145342|ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829014 [Brachypodium
distachyon]
Length = 317
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF-QVTCVCVC 284
K+ PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F V+
Sbjct: 212 KDNPPCNTLFIGNLGETVVEEELRGLFSVQPGFKQMKVLRQDRNTVCFIEFDDVSAASAV 271
Query: 285 H 285
H
Sbjct: 272 H 272
>gi|223949569|gb|ACN28868.1| unknown [Zea mays]
Length = 234
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
K+ PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 129 KDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 180
>gi|194708472|gb|ACF88320.1| unknown [Zea mays]
Length = 231
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ 277
PC TLF+ NLG T E+EL +FS PGF ++K+ V F++F+
Sbjct: 130 PCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFE 177
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 47 PQPPPLGSYSASFPAYGSY-DEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLR---- 101
P PPL + + F ++V T+FV G P+D++ RE N+F G+E + L+
Sbjct: 16 PSSPPLSAAQSPFSGTSPVPEDVTTIFVVGFPDDMQEREFQNMFLFSKGFEGASLKWHCK 75
Query: 102 -----SSTQNSQPFAFAVFSDQQSALGAMYALN-------KGSTLYIDLAKSNSRSKR 147
+ Q FA F+ + A+ A+ LN K S L ++AK N K+
Sbjct: 76 QDEETNENNKKQMIGFARFATRSEAIEAVDILNGRKVDLEKSSVLKAEMAKKNLHIKK 133
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKL--KIQSTYGPPVAFVDFQ 277
PC TL+V NL + ++EL +FSKC G+ ++ +I+S P+ FV+F+
Sbjct: 280 PCNTLYVGNLPSSTNQEELRSLFSKCEGYKRMSFRIKSPQQGPMCFVEFE 329
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQVTCVCVCHILFS 289
PC TL+V NL P E+EL +FSK G+ +L ++ P+ FV+F+ V +
Sbjct: 411 PCNTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFE--DVRTAGKTLN 468
Query: 290 LLFKEKLSDGISS 302
L+ KLS+ I +
Sbjct: 469 ELYGYKLSNSIKT 481
>gi|125560763|gb|EAZ06211.1| hypothetical protein OsI_28451 [Oryza sativa Indica Group]
Length = 215
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTCVCVC 284
K+ PC TLF+ NLG T E+EL +FS PG+ ++K+ V F++F+ V
Sbjct: 130 KDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAV 189
Query: 285 H 285
H
Sbjct: 190 H 190
>gi|218200768|gb|EEC83195.1| hypothetical protein OsI_28448 [Oryza sativa Indica Group]
Length = 215
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 226 KNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQ-VTCVCVC 284
K+ PC TLF+ NLG T E+EL +FS PG+ ++K+ V F++F+ V
Sbjct: 130 KDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAV 189
Query: 285 H 285
H
Sbjct: 190 H 190
>gi|302834225|ref|XP_002948675.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
gi|300265866|gb|EFJ50055.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
Length = 332
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
PC TLFV NL T E EL +F PGF +LK+ + FV+F
Sbjct: 205 PCNTLFVGNLSETVDENELRNLFGGAPGFRQLKLMRGPKATLGFVEF 251
>gi|414870052|tpg|DAA48609.1| TPA: hypothetical protein ZEAMMB73_404025 [Zea mays]
Length = 665
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 33 VVAPPTQPYMPQPQPQPPPLGSYSASFP---------AYGSYDEVRTLFVAGLPEDVKPR 83
+VAPP Q + P P P + S + P + DEV T+F+ LP DVK
Sbjct: 422 LVAPPFQQWPPTGAVLPLPGSTASVTNPPSPPIPGASDIVAADEVCTIFM-DLPIDVKET 480
Query: 84 EIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA-------MYALNKGSTLYI 136
E++NL G+E+ + + + +QP FA+FS A+ A ++ L
Sbjct: 481 EMHNLLCWLLGFEAFEM--NFKGNQPMGFALFSTVHQAITAKAMFQDTVFDTETKVVLQT 538
Query: 137 DLAKSNSRSKRSRTDDEWTG 156
D+AK N KRS D G
Sbjct: 539 DMAKKNLFVKRSNQLDLVKG 558
>gi|294463303|gb|ADE77187.1| unknown [Picea sitchensis]
Length = 245
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 25/185 (13%)
Query: 110 FAFAVFSDQQSALGAMYAL-------NKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKAR 162
FA+FS A+ A AL + S L ++AK N KR + + S +
Sbjct: 1 MGFALFSTAHMAIQARDALQNLVFDADTNSVLRAEMAKKNLYVKRVSDTNNFDQSKRMRT 60
Query: 163 GPSAFSRGTADLGIGSVHMPGMGNSAFNTIGYPHT---QSHENFDARGG------SLITT 213
G D + H PG S ++ P T S ++D GG +
Sbjct: 61 G--------GDYTPAAYHAPGTFVSPPASVWGPQTYMASSTASYDPYGGYPVAQVPPVPI 112
Query: 214 AKFNNSSAP-SGPKNVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVA 272
AP K+ PC TLF+ NLG E EL +FS PGF ++K+ V
Sbjct: 113 PVAPAGYAPVQNMKDNPPCNTLFIGNLGENTNETELRGLFSGQPGFRQMKVLRQERSTVC 172
Query: 273 FVDFQ 277
F++++
Sbjct: 173 FIEYE 177
>gi|403216283|emb|CCK70780.1| hypothetical protein KNAG_0F01120 [Kazachstania naganishii CBS
8797]
Length = 635
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 230 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQ-----STYGPPVAFVDFQVTCVCVC 284
PC TL+V NL P TEQEL +FS GF +L + P+ FV+F V
Sbjct: 495 PCNTLYVGNLPPDATEQELRHLFSAQQGFRRLSFRNKNGNGNGHGPMCFVEFD--DVSFA 552
Query: 285 HILFSLLFKEKLSDGISSNWDQWRL 309
+ L+ KL SN RL
Sbjct: 553 TRALAELYGSKLPRSTISNKGGIRL 577
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
+ + C+TLFVANL E L VF GF +L++ + G VAFV++
Sbjct: 223 STSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 272
>gi|294868584|ref|XP_002765593.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
gi|239865672|gb|EEQ98310.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
Length = 400
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 211 ITTAKFNNSSAPSGPKNV----TPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQST 266
+TTA+ ++A S PK V P TLFV NL P CT ++LT VF PGF ++ +
Sbjct: 303 LTTAEDFFNTAVSAPKVVQHSNVPNKTLFVENLPPRCTPEKLTAVFKSYPGFEGTRVIAE 362
Query: 267 YGPPVAFVDF 276
V F+DF
Sbjct: 363 RQ--VGFIDF 370
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 227 NVTPCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDF 276
+ + C+TLFVANL E L VF GF +L++ + G VAFV++
Sbjct: 223 STSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEY 272
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 70 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQ-NSQPFAFAVFSDQQSALGAMYAL 128
TL ++G+P+D REI ++FR F G++S+ L S P FA F++ + A A+ L
Sbjct: 233 TLHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERGPLCFAEFTNPELAFVALETL 292
Query: 129 N---------KGSTLYIDLAKSNSRSKRSR 149
S L+I AK+ + +R
Sbjct: 293 EGYLIDRDDPDSSALHIAFAKNKPSGRMAR 322
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 5 YPPPAGLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGS 64
Y PPAG+ PP P PPG + P Q MP P PPL +
Sbjct: 165 YMPPAGM------IPPTGLAPGQIPPGAM---PPQQLMPGQMPPAPPLSENPPN------ 209
Query: 65 YDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSSTQNSQPFAFAVFSDQQSALGA 124
LF+ LPE+ + LF +FPG++ +HL + AF F ++ A A
Sbjct: 210 ----HILFLTNLPEETNELMLSMLFTQFPGFKEAHLVPGCHD---IAFVEFDNEVQAGAA 262
Query: 125 MYALNKGSTLYIDLAKSNSRSKRSR 149
+ AL +G + + A S K+ R
Sbjct: 263 LDAL-QGFKITQNNAMKISFVKKER 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,352,937,478
Number of Sequences: 23463169
Number of extensions: 329570685
Number of successful extensions: 5514950
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16077
Number of HSP's successfully gapped in prelim test: 15031
Number of HSP's that attempted gapping in prelim test: 4239147
Number of HSP's gapped (non-prelim): 651462
length of query: 323
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 181
effective length of database: 9,027,425,369
effective search space: 1633963991789
effective search space used: 1633963991789
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)