Query 020633
Match_columns 323
No_of_seqs 505 out of 1364
Neff 12.1
Searched_HMMs 46136
Date Fri Mar 29 03:56:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020633.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020633hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 1.3E-47 2.9E-52 282.2 28.2 306 8-314 5-312 (313)
2 PLN02298 hydrolase, alpha/beta 100.0 4.6E-45 9.9E-50 293.2 32.5 316 1-317 1-320 (330)
3 PLN02385 hydrolase; alpha/beta 100.0 2.5E-42 5.4E-47 278.8 30.6 289 27-316 58-347 (349)
4 PHA02857 monoglyceride lipase; 100.0 4.8E-37 1E-41 241.2 29.6 267 34-314 4-273 (276)
5 COG2267 PldB Lysophospholipase 100.0 8.4E-37 1.8E-41 237.5 26.8 282 29-316 8-296 (298)
6 PLN02652 hydrolase; alpha/beta 100.0 8.2E-36 1.8E-40 240.8 30.9 279 27-316 107-389 (395)
7 PRK10749 lysophospholipase L2; 100.0 9.2E-35 2E-39 232.6 30.3 276 31-314 31-329 (330)
8 PLN02824 hydrolase, alpha/beta 100.0 1.6E-34 3.4E-39 228.9 20.5 254 38-313 15-293 (294)
9 PRK00870 haloalkane dehalogena 100.0 6.5E-34 1.4E-38 226.0 23.0 253 41-314 35-301 (302)
10 TIGR02240 PHA_depoly_arom poly 100.0 5E-34 1.1E-38 223.8 21.9 257 38-317 9-269 (276)
11 PRK03592 haloalkane dehalogena 100.0 2.7E-33 5.8E-38 221.9 23.5 259 37-316 13-291 (295)
12 TIGR01607 PST-A Plasmodium sub 100.0 5.6E-33 1.2E-37 221.4 25.0 268 35-312 2-331 (332)
13 KOG4178 Soluble epoxide hydrol 100.0 8.4E-33 1.8E-37 207.6 23.6 270 28-314 19-320 (322)
14 PLN02965 Probable pheophorbida 100.0 1.4E-33 3.1E-38 218.5 18.2 242 55-314 3-253 (255)
15 PLN03087 BODYGUARD 1 domain co 100.0 3.6E-33 7.8E-38 228.0 21.3 264 34-313 179-478 (481)
16 PRK03204 haloalkane dehalogena 100.0 1.1E-32 2.4E-37 216.4 21.1 260 28-311 12-285 (286)
17 PRK10673 acyl-CoA esterase; Pr 100.0 9.3E-33 2E-37 214.8 20.0 252 42-313 3-254 (255)
18 PLN02679 hydrolase, alpha/beta 100.0 1.7E-32 3.7E-37 221.6 20.9 264 32-313 63-356 (360)
19 TIGR03611 RutD pyrimidine util 100.0 4.3E-32 9.3E-37 211.6 18.7 248 42-312 1-256 (257)
20 PRK10349 carboxylesterase BioH 100.0 2E-32 4.2E-37 212.7 16.0 242 42-312 4-254 (256)
21 TIGR03056 bchO_mg_che_rel puta 100.0 1E-31 2.2E-36 211.9 19.5 256 35-312 10-278 (278)
22 PLN03084 alpha/beta hydrolase 100.0 5.4E-31 1.2E-35 211.5 23.5 264 27-312 101-382 (383)
23 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.4E-31 7.3E-36 209.1 18.4 248 41-312 21-281 (282)
24 PRK06489 hypothetical protein; 100.0 1.2E-30 2.6E-35 211.5 20.8 259 38-315 47-358 (360)
25 PLN02578 hydrolase 100.0 2.1E-30 4.5E-35 209.4 21.4 254 34-312 69-353 (354)
26 KOG4409 Predicted hydrolase/ac 100.0 9.7E-31 2.1E-35 197.1 17.9 272 23-313 58-363 (365)
27 PRK13604 luxD acyl transferase 100.0 1.8E-29 3.9E-34 192.4 24.3 231 29-292 8-246 (307)
28 COG1647 Esterase/lipase [Gener 100.0 6.8E-30 1.5E-34 179.6 20.0 228 55-312 15-242 (243)
29 PRK07581 hypothetical protein; 100.0 2.3E-30 5.1E-35 208.8 18.5 261 39-316 24-338 (339)
30 TIGR01250 pro_imino_pep_2 prol 100.0 5.5E-30 1.2E-34 203.1 20.2 251 37-312 8-288 (288)
31 PLN02511 hydrolase 100.0 1.9E-29 4.2E-34 205.0 22.8 283 26-317 67-368 (388)
32 TIGR01738 bioH putative pimelo 100.0 5.5E-30 1.2E-34 198.2 17.6 231 55-311 4-245 (245)
33 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.5E-30 5.4E-35 200.9 15.0 247 41-312 1-251 (251)
34 PRK11126 2-succinyl-6-hydroxy- 100.0 2.1E-30 4.4E-35 200.0 14.3 230 55-313 2-241 (242)
35 PLN02211 methyl indole-3-aceta 100.0 6.8E-30 1.5E-34 198.6 17.1 252 38-312 4-268 (273)
36 PRK08775 homoserine O-acetyltr 100.0 4.5E-30 9.7E-35 206.9 15.3 257 38-315 43-340 (343)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 2.5E-30 5.4E-35 197.9 11.4 217 58-298 1-224 (228)
38 PRK00175 metX homoserine O-ace 100.0 5E-29 1.1E-33 202.8 18.8 261 39-316 31-376 (379)
39 TIGR01392 homoserO_Ac_trn homo 100.0 1.2E-29 2.6E-34 205.1 14.8 259 38-312 13-351 (351)
40 KOG1454 Predicted hydrolase/ac 100.0 4.2E-29 9E-34 196.3 17.1 270 31-314 26-324 (326)
41 TIGR01249 pro_imino_pep_1 prol 100.0 1.4E-28 2.9E-33 195.4 19.8 260 32-310 6-305 (306)
42 TIGR03695 menH_SHCHC 2-succiny 100.0 4.9E-29 1.1E-33 193.5 16.7 233 55-311 1-250 (251)
43 PRK05077 frsA fermentation/res 100.0 6.5E-28 1.4E-32 196.7 23.5 247 26-315 164-413 (414)
44 PLN02894 hydrolase, alpha/beta 100.0 3.8E-27 8.3E-32 192.3 23.8 246 53-316 103-387 (402)
45 PRK10985 putative hydrolase; P 100.0 1.3E-27 2.8E-32 190.8 19.9 281 26-315 27-321 (324)
46 PRK14875 acetoin dehydrogenase 100.0 1.5E-28 3.2E-33 201.5 14.4 244 39-313 117-370 (371)
47 TIGR03100 hydr1_PEP hydrolase, 100.0 2.6E-26 5.6E-31 178.8 23.1 255 32-312 4-273 (274)
48 PLN02980 2-oxoglutarate decarb 100.0 3.6E-27 7.7E-32 220.1 19.2 244 54-318 1370-1643(1655)
49 KOG4391 Predicted alpha/beta h 100.0 3.1E-27 6.7E-32 165.3 13.9 238 21-316 45-284 (300)
50 KOG2382 Predicted alpha/beta h 100.0 1.4E-26 3E-31 174.5 17.1 259 41-314 37-313 (315)
51 PRK10566 esterase; Provisional 99.9 4.5E-25 9.7E-30 170.7 21.4 211 53-315 25-249 (249)
52 PRK05855 short chain dehydroge 99.9 1.4E-25 3.1E-30 194.8 20.2 264 33-314 5-292 (582)
53 TIGR01836 PHA_synth_III_C poly 99.9 5.7E-25 1.2E-29 177.7 18.5 274 30-314 36-350 (350)
54 PLN02872 triacylglycerol lipas 99.9 1.4E-24 2.9E-29 175.0 19.8 290 21-317 35-392 (395)
55 COG0429 Predicted hydrolase of 99.9 3E-24 6.5E-29 161.4 19.8 287 25-316 44-342 (345)
56 KOG1552 Predicted alpha/beta h 99.9 2.4E-24 5.1E-29 156.6 17.1 218 30-316 35-254 (258)
57 PRK06765 homoserine O-acetyltr 99.9 1.1E-24 2.4E-29 175.6 15.9 260 41-313 42-387 (389)
58 COG1506 DAP2 Dipeptidyl aminop 99.9 1.5E-23 3.3E-28 180.0 18.7 249 26-317 361-619 (620)
59 KOG2984 Predicted hydrolase [G 99.9 4.7E-24 1E-28 147.7 11.1 235 38-314 28-276 (277)
60 PF12695 Abhydrolase_5: Alpha/ 99.9 2E-23 4.3E-28 147.9 14.1 145 57-290 1-145 (145)
61 KOG1838 Alpha/beta hydrolase [ 99.9 2.3E-22 5E-27 157.1 19.8 283 25-315 88-389 (409)
62 TIGR01838 PHA_synth_I poly(R)- 99.9 1.1E-22 2.5E-27 168.3 18.9 263 22-298 154-463 (532)
63 KOG2564 Predicted acetyltransf 99.9 9.6E-23 2.1E-27 148.6 16.2 126 33-165 53-181 (343)
64 PRK11460 putative hydrolase; P 99.9 5.1E-22 1.1E-26 150.3 19.4 181 53-315 14-209 (232)
65 PRK11071 esterase YqiA; Provis 99.9 3E-22 6.4E-27 146.5 17.2 183 56-312 2-189 (190)
66 PF01738 DLH: Dienelactone hyd 99.9 2E-22 4.2E-27 152.3 16.2 201 43-315 2-218 (218)
67 TIGR03101 hydr2_PEP hydrolase, 99.9 2E-22 4.4E-27 153.4 16.0 132 32-168 2-136 (266)
68 KOG4667 Predicted esterase [Li 99.9 3.9E-22 8.4E-27 139.7 15.3 244 30-315 10-259 (269)
69 PF00326 Peptidase_S9: Prolyl 99.9 9.7E-23 2.1E-27 153.5 13.1 203 71-317 2-212 (213)
70 COG0412 Dienelactone hydrolase 99.9 1.2E-20 2.6E-25 142.0 21.7 213 31-316 3-235 (236)
71 TIGR02821 fghA_ester_D S-formy 99.9 6.4E-20 1.4E-24 143.1 24.0 228 32-314 15-274 (275)
72 PRK07868 acyl-CoA synthetase; 99.9 4.1E-21 8.9E-26 174.2 19.6 272 30-316 37-363 (994)
73 PF00561 Abhydrolase_1: alpha/ 99.9 3.2E-23 6.9E-28 158.8 5.0 205 84-298 1-223 (230)
74 COG2945 Predicted hydrolase of 99.9 9.4E-21 2E-25 130.8 16.1 195 31-312 5-205 (210)
75 PF06500 DUF1100: Alpha/beta h 99.9 7.6E-21 1.6E-25 149.9 16.1 246 26-315 161-410 (411)
76 PLN00021 chlorophyllase 99.9 3.9E-20 8.5E-25 144.9 19.8 208 41-317 38-286 (313)
77 PF05448 AXE1: Acetyl xylan es 99.9 1E-20 2.2E-25 148.3 14.8 247 26-314 52-320 (320)
78 PLN02442 S-formylglutathione h 99.9 3.3E-19 7.3E-24 139.2 21.9 205 41-292 31-264 (283)
79 TIGR01840 esterase_phb esteras 99.8 7.5E-20 1.6E-24 137.3 15.8 120 45-166 2-130 (212)
80 PF02230 Abhydrolase_2: Phosph 99.8 1.6E-19 3.5E-24 135.8 16.1 185 53-315 12-216 (216)
81 PRK10162 acetyl esterase; Prov 99.8 1.4E-18 3.1E-23 138.1 21.8 243 29-316 56-317 (318)
82 COG0596 MhpC Predicted hydrola 99.8 4.6E-19 9.9E-24 139.1 18.4 248 41-311 11-279 (282)
83 PF06342 DUF1057: Alpha/beta h 99.8 8.8E-18 1.9E-22 124.2 21.2 108 53-169 33-140 (297)
84 PF03096 Ndr: Ndr family; Int 99.8 1.7E-18 3.7E-23 129.8 17.3 264 32-313 1-278 (283)
85 TIGR00976 /NonD putative hydro 99.8 5E-19 1.1E-23 151.1 16.4 130 36-169 2-135 (550)
86 PRK10115 protease 2; Provision 99.8 8.3E-18 1.8E-22 145.8 21.8 252 26-317 412-678 (686)
87 KOG2931 Differentiation-relate 99.8 6.3E-18 1.4E-22 124.7 16.7 267 30-313 22-305 (326)
88 COG3458 Acetyl esterase (deace 99.8 1E-17 2.2E-22 122.2 16.2 244 26-314 52-317 (321)
89 COG4757 Predicted alpha/beta h 99.8 1.2E-17 2.5E-22 118.9 14.5 259 33-311 8-280 (281)
90 COG3208 GrsT Predicted thioest 99.8 2.5E-17 5.3E-22 119.5 15.8 226 53-314 5-236 (244)
91 COG2021 MET2 Homoserine acetyl 99.8 2E-17 4.4E-22 127.1 16.1 258 41-313 37-367 (368)
92 COG0400 Predicted esterase [Ge 99.8 1.7E-17 3.6E-22 120.8 14.2 180 53-314 16-205 (207)
93 PF02273 Acyl_transf_2: Acyl t 99.8 3.8E-17 8.1E-22 117.4 15.6 230 32-292 4-239 (294)
94 TIGR01839 PHA_synth_II poly(R) 99.8 8.5E-17 1.8E-21 132.2 18.2 259 25-296 184-487 (560)
95 PF12146 Hydrolase_4: Putative 99.8 4.6E-18 9.9E-23 104.1 8.2 78 40-119 1-79 (79)
96 PF08538 DUF1749: Protein of u 99.8 1.6E-16 3.4E-21 120.5 18.1 254 43-312 21-303 (303)
97 PF02129 Peptidase_S15: X-Pro 99.7 1E-16 2.2E-21 125.0 13.1 128 39-170 1-140 (272)
98 TIGR01849 PHB_depoly_PhaZ poly 99.7 7.3E-16 1.6E-20 123.2 16.5 249 55-314 102-406 (406)
99 KOG3043 Predicted hydrolase re 99.7 5.2E-16 1.1E-20 110.3 13.7 196 42-315 28-241 (242)
100 PF06821 Ser_hydrolase: Serine 99.7 3.9E-16 8.4E-21 111.3 12.7 153 58-292 1-155 (171)
101 KOG2624 Triglyceride lipase-ch 99.7 3.9E-15 8.4E-20 118.8 19.6 290 21-315 39-399 (403)
102 PF12740 Chlorophyllase2: Chlo 99.7 9.9E-15 2.2E-19 108.8 18.4 203 45-317 7-253 (259)
103 TIGR03230 lipo_lipase lipoprot 99.7 1E-15 2.2E-20 123.8 14.2 112 54-167 40-155 (442)
104 cd00707 Pancreat_lipase_like P 99.7 4.4E-16 9.6E-21 120.7 10.3 121 41-167 26-148 (275)
105 COG3571 Predicted hydrolase of 99.7 5.1E-14 1.1E-18 94.5 17.4 187 53-313 12-210 (213)
106 COG0657 Aes Esterase/lipase [L 99.7 7.7E-14 1.7E-18 111.4 21.5 235 37-312 58-308 (312)
107 PF10230 DUF2305: Uncharacteri 99.6 1.1E-14 2.3E-19 112.2 15.2 114 55-170 2-126 (266)
108 PF05728 UPF0227: Uncharacteri 99.6 4.5E-14 9.7E-19 101.8 16.5 182 58-311 2-186 (187)
109 PF00975 Thioesterase: Thioest 99.6 4.1E-14 8.8E-19 108.1 17.0 102 56-167 1-105 (229)
110 PF12715 Abhydrolase_7: Abhydr 99.6 2.2E-15 4.7E-20 117.3 9.9 140 24-165 82-259 (390)
111 KOG1515 Arylacetamide deacetyl 99.6 4.7E-13 1E-17 104.8 22.7 251 33-314 64-335 (336)
112 PRK05371 x-prolyl-dipeptidyl a 99.6 1.2E-14 2.6E-19 127.1 14.3 232 74-317 270-522 (767)
113 COG3243 PhaC Poly(3-hydroxyalk 99.6 9E-14 1.9E-18 108.7 16.4 277 28-316 79-401 (445)
114 PF07859 Abhydrolase_3: alpha/ 99.6 9.7E-15 2.1E-19 110.0 10.4 102 58-168 1-112 (211)
115 TIGR03502 lipase_Pla1_cef extr 99.6 2.1E-14 4.5E-19 123.5 12.7 119 31-150 418-575 (792)
116 KOG2100 Dipeptidyl aminopeptid 99.6 2.3E-13 4.9E-18 118.9 18.2 227 39-317 506-750 (755)
117 PF07224 Chlorophyllase: Chlor 99.6 2.4E-13 5.2E-18 99.3 14.5 120 41-169 32-160 (307)
118 PF10503 Esterase_phd: Esteras 99.6 4.6E-13 1E-17 98.8 16.4 123 42-166 1-132 (220)
119 PF03403 PAF-AH_p_II: Platelet 99.5 1.2E-13 2.6E-18 111.4 13.2 189 53-316 98-360 (379)
120 KOG4627 Kynurenine formamidase 99.5 6.6E-14 1.4E-18 98.1 9.1 198 40-296 54-253 (270)
121 PF09752 DUF2048: Uncharacteri 99.5 4.6E-12 9.9E-17 98.0 19.2 222 53-293 90-331 (348)
122 PF08840 BAAT_C: BAAT / Acyl-C 99.5 1.2E-13 2.7E-18 102.9 9.7 180 112-316 4-212 (213)
123 KOG2281 Dipeptidyl aminopeptid 99.5 1.2E-12 2.6E-17 107.1 15.7 235 29-313 612-866 (867)
124 COG2936 Predicted acyl esteras 99.5 1.1E-12 2.4E-17 107.9 15.5 137 28-168 17-161 (563)
125 COG4099 Predicted peptidase [G 99.5 1.5E-12 3.2E-17 96.8 13.7 122 38-166 169-304 (387)
126 PF06028 DUF915: Alpha/beta hy 99.5 2.9E-12 6.2E-17 96.9 15.7 209 53-311 9-252 (255)
127 COG4188 Predicted dienelactone 99.5 1.5E-12 3.3E-17 100.9 14.3 240 25-298 32-302 (365)
128 COG3545 Predicted esterase of 99.5 3.4E-12 7.3E-17 87.8 13.5 176 56-313 3-178 (181)
129 PF06057 VirJ: Bacterial virul 99.5 3.3E-12 7.3E-17 90.1 13.5 103 56-167 3-108 (192)
130 KOG2565 Predicted hydrolases o 99.5 2.7E-12 5.8E-17 98.4 13.9 120 36-163 129-261 (469)
131 KOG2551 Phospholipase/carboxyh 99.4 1.4E-11 3.1E-16 88.1 15.6 180 54-316 4-222 (230)
132 PTZ00472 serine carboxypeptida 99.4 6.2E-11 1.3E-15 98.6 19.2 136 31-168 48-218 (462)
133 PF03583 LIP: Secretory lipase 99.4 1.7E-11 3.6E-16 95.9 14.6 230 74-318 17-285 (290)
134 KOG3975 Uncharacterized conser 99.4 9.4E-11 2E-15 85.1 15.6 234 53-298 27-291 (301)
135 PF03959 FSH1: Serine hydrolas 99.4 5E-12 1.1E-16 94.5 9.0 165 54-292 3-203 (212)
136 KOG2112 Lysophospholipase [Lip 99.3 8.1E-11 1.8E-15 83.7 14.0 182 55-313 3-203 (206)
137 COG3509 LpqC Poly(3-hydroxybut 99.3 2.3E-11 5E-16 91.0 11.0 131 33-166 38-179 (312)
138 PF07819 PGAP1: PGAP1-like pro 99.3 6.5E-11 1.4E-15 88.8 13.2 111 54-170 3-127 (225)
139 PRK10252 entF enterobactin syn 99.3 2.2E-10 4.8E-15 109.1 19.2 100 55-165 1068-1170(1296)
140 COG3319 Thioesterase domains o 99.3 7.1E-10 1.5E-14 83.8 16.6 102 56-167 1-104 (257)
141 KOG3847 Phospholipase A2 (plat 99.3 1.5E-10 3.4E-15 86.9 12.8 111 53-166 116-275 (399)
142 PRK04940 hypothetical protein; 99.3 1.8E-09 4E-14 76.3 16.6 137 108-312 40-178 (180)
143 KOG3253 Predicted alpha/beta h 99.2 3.9E-10 8.5E-15 92.1 13.5 187 55-314 176-374 (784)
144 KOG1553 Predicted alpha/beta h 99.2 5.9E-11 1.3E-15 90.3 8.1 129 30-167 214-346 (517)
145 PF12048 DUF3530: Protein of u 99.2 7.7E-09 1.7E-13 81.6 20.1 208 31-314 63-309 (310)
146 PRK10439 enterobactin/ferric e 99.2 6.8E-08 1.5E-12 79.4 23.8 122 41-166 193-323 (411)
147 PF01674 Lipase_2: Lipase (cla 99.1 7.6E-11 1.7E-15 87.0 4.6 91 56-150 2-95 (219)
148 COG1505 Serine proteases of th 99.1 1.3E-09 2.9E-14 89.3 11.5 250 22-315 386-647 (648)
149 COG4814 Uncharacterized protei 99.1 1.9E-08 4E-13 73.7 15.9 110 55-167 45-177 (288)
150 PF05677 DUF818: Chlamydia CHL 99.1 4.1E-09 8.9E-14 81.0 12.8 117 30-151 112-236 (365)
151 PF00151 Lipase: Lipase; Inte 99.1 2E-10 4.3E-15 91.0 5.4 115 53-168 69-189 (331)
152 PLN02733 phosphatidylcholine-s 99.0 9.8E-10 2.1E-14 90.1 8.4 93 70-168 108-203 (440)
153 PF05990 DUF900: Alpha/beta hy 99.0 3.7E-09 8.1E-14 79.9 9.5 113 53-167 16-138 (233)
154 PF11339 DUF3141: Protein of u 99.0 4.3E-08 9.4E-13 79.5 15.2 88 74-170 92-179 (581)
155 KOG4840 Predicted hydrolases o 99.0 2.3E-07 5E-12 66.7 17.0 105 55-169 36-147 (299)
156 PF00756 Esterase: Putative es 98.9 1.2E-08 2.6E-13 79.1 10.4 127 41-168 7-152 (251)
157 smart00824 PKS_TE Thioesterase 98.9 1.5E-07 3.2E-12 70.9 15.4 96 60-166 2-102 (212)
158 PF00450 Peptidase_S10: Serine 98.9 1.6E-08 3.4E-13 84.7 10.6 136 31-168 12-183 (415)
159 KOG3101 Esterase D [General fu 98.9 1.2E-07 2.6E-12 67.6 12.9 128 41-169 27-179 (283)
160 KOG2237 Predicted serine prote 98.9 1E-07 2.2E-12 79.1 13.8 146 22-168 433-586 (712)
161 COG1770 PtrB Protease II [Amin 98.9 3.8E-07 8.2E-12 76.3 16.8 141 28-169 417-565 (682)
162 COG3150 Predicted esterase [Ge 98.8 3.9E-07 8.3E-12 62.5 13.6 89 58-167 2-92 (191)
163 COG1073 Hydrolases of the alph 98.8 4.1E-07 9E-12 72.5 15.8 70 245-315 228-298 (299)
164 PF10340 DUF2424: Protein of u 98.7 1.2E-06 2.6E-11 69.7 15.8 109 53-169 120-238 (374)
165 cd00312 Esterase_lipase Estera 98.7 3.6E-08 7.7E-13 84.3 7.8 120 41-167 78-214 (493)
166 PLN02209 serine carboxypeptida 98.7 2.9E-06 6.3E-11 70.2 18.1 134 33-168 42-214 (437)
167 KOG1282 Serine carboxypeptidas 98.7 1.7E-05 3.8E-10 65.3 21.4 139 29-169 43-216 (454)
168 PLN03016 sinapoylglucose-malat 98.7 8.8E-06 1.9E-10 67.4 19.7 136 31-168 38-212 (433)
169 PF11144 DUF2920: Protein of u 98.7 1E-05 2.2E-10 64.7 19.2 133 33-166 12-219 (403)
170 PF05057 DUF676: Putative seri 98.7 1.1E-07 2.3E-12 71.5 7.8 94 53-149 2-97 (217)
171 PLN02606 palmitoyl-protein thi 98.7 2.7E-06 5.8E-11 65.4 15.1 104 55-167 26-133 (306)
172 PF05705 DUF829: Eukaryotic pr 98.7 8.2E-07 1.8E-11 68.2 12.5 229 57-311 1-240 (240)
173 COG4782 Uncharacterized protei 98.6 4.1E-07 8.8E-12 70.8 10.1 112 53-167 114-235 (377)
174 KOG1551 Uncharacterized conser 98.6 3.3E-06 7.2E-11 62.6 13.7 251 41-315 101-367 (371)
175 PF05577 Peptidase_S28: Serine 98.6 7E-07 1.5E-11 74.9 11.6 112 55-167 29-149 (434)
176 COG2272 PnbA Carboxylesterase 98.6 3.3E-07 7.3E-12 74.4 8.8 122 41-167 79-218 (491)
177 PF02089 Palm_thioest: Palmito 98.5 3.9E-07 8.5E-12 69.3 7.7 108 54-166 4-116 (279)
178 COG1075 LipA Predicted acetylt 98.5 3.3E-07 7.1E-12 73.5 7.4 103 55-168 59-166 (336)
179 COG0627 Predicted esterase [Ge 98.5 1.3E-05 2.7E-10 63.3 15.1 113 53-169 52-190 (316)
180 COG3946 VirJ Type IV secretory 98.5 2E-05 4.4E-10 62.4 15.5 104 41-153 246-349 (456)
181 PLN02633 palmitoyl protein thi 98.5 8.6E-06 1.9E-10 62.7 12.9 104 55-166 25-131 (314)
182 PF04301 DUF452: Protein of un 98.4 3.4E-06 7.4E-11 61.9 10.2 78 55-165 11-89 (213)
183 PF00135 COesterase: Carboxyle 98.4 1.4E-06 3.1E-11 75.6 9.4 123 42-167 109-246 (535)
184 KOG2541 Palmitoyl protein thio 98.4 1.4E-05 3E-10 59.6 11.9 103 56-166 24-128 (296)
185 PF07082 DUF1350: Protein of u 98.3 1.3E-05 2.8E-10 59.7 10.0 104 53-163 15-122 (250)
186 PF08386 Abhydrolase_4: TAP-li 98.3 3.1E-06 6.8E-11 55.1 6.0 61 248-314 34-94 (103)
187 PF10142 PhoPQ_related: PhoPQ- 98.2 9E-05 1.9E-09 59.5 13.9 154 126-316 168-322 (367)
188 PF02450 LCAT: Lecithin:choles 98.2 9.3E-06 2E-10 66.8 8.6 85 71-167 66-161 (389)
189 COG2819 Predicted hydrolase of 98.2 0.0001 2.2E-09 55.7 12.7 45 121-166 128-172 (264)
190 KOG3724 Negative regulator of 98.2 2.6E-05 5.6E-10 66.9 10.6 111 54-170 88-224 (973)
191 COG4553 DepA Poly-beta-hydroxy 98.2 0.00012 2.7E-09 55.4 12.9 116 44-169 92-212 (415)
192 PLN02213 sinapoylglucose-malat 98.1 0.00029 6.3E-09 56.5 15.6 84 85-168 3-98 (319)
193 PF05576 Peptidase_S37: PS-10 98.1 0.00028 6.1E-09 56.5 14.4 107 53-166 61-169 (448)
194 COG2382 Fes Enterochelin ester 98.1 0.00036 7.8E-09 53.6 14.4 111 53-167 96-213 (299)
195 KOG2183 Prolylcarboxypeptidase 98.1 2.4E-05 5.2E-10 62.1 8.1 110 56-169 81-206 (492)
196 KOG3967 Uncharacterized conser 97.9 0.00051 1.1E-08 49.6 10.8 112 53-169 99-230 (297)
197 PF04083 Abhydro_lipase: Parti 97.8 4.8E-05 1E-09 44.0 4.5 50 22-72 4-59 (63)
198 KOG2182 Hydrolytic enzymes of 97.8 0.00033 7.2E-09 57.4 10.6 112 54-167 85-208 (514)
199 cd00741 Lipase Lipase. Lipase 97.8 7.2E-05 1.6E-09 53.1 6.0 58 107-166 7-67 (153)
200 PF06259 Abhydrolase_8: Alpha/ 97.7 0.0024 5.3E-08 45.8 12.5 120 44-166 9-144 (177)
201 KOG2369 Lecithin:cholesterol a 97.6 0.00015 3.2E-09 59.1 6.1 76 70-153 124-205 (473)
202 cd00519 Lipase_3 Lipase (class 97.6 0.00072 1.6E-08 51.6 8.8 59 106-166 106-168 (229)
203 PF11187 DUF2974: Protein of u 97.5 0.0036 7.8E-08 47.2 12.0 49 114-166 71-123 (224)
204 PLN02517 phosphatidylcholine-s 97.5 0.00038 8.2E-09 58.8 6.6 93 70-166 156-263 (642)
205 PF01764 Lipase_3: Lipase (cla 97.4 0.00044 9.6E-09 48.2 5.4 56 109-166 45-106 (140)
206 KOG1516 Carboxylesterase and r 97.3 0.0014 3.1E-08 57.1 8.9 121 41-165 96-231 (545)
207 KOG2521 Uncharacterized conser 97.3 0.016 3.4E-07 46.4 13.3 68 246-316 223-292 (350)
208 PF01083 Cutinase: Cutinase; 97.2 0.0014 3.1E-08 47.6 6.4 78 84-167 40-123 (179)
209 COG2939 Carboxypeptidase C (ca 97.2 0.0022 4.7E-08 53.1 7.8 124 42-167 87-237 (498)
210 PLN02454 triacylglycerol lipas 96.9 0.0032 7E-08 51.3 6.5 42 109-150 207-248 (414)
211 KOG4388 Hormone-sensitive lipa 96.8 0.0077 1.7E-07 50.7 7.6 119 39-168 380-510 (880)
212 COG2830 Uncharacterized protei 96.6 0.019 4.2E-07 39.7 7.3 77 55-164 11-88 (214)
213 KOG1283 Serine carboxypeptidas 96.5 0.07 1.5E-06 41.7 10.9 133 35-169 8-169 (414)
214 PF06441 EHN: Epoxide hydrolas 96.5 0.0085 1.8E-07 39.5 5.2 39 30-69 67-106 (112)
215 PLN02310 triacylglycerol lipas 96.5 0.0082 1.8E-07 49.0 5.9 22 129-150 208-229 (405)
216 PLN02162 triacylglycerol lipas 96.3 0.011 2.3E-07 48.9 5.7 34 114-149 264-297 (475)
217 PF06850 PHB_depo_C: PHB de-po 96.3 0.0095 2.1E-07 42.9 4.7 66 248-314 134-202 (202)
218 PLN02408 phospholipase A1 96.2 0.0082 1.8E-07 48.4 4.7 39 112-150 182-220 (365)
219 PLN02571 triacylglycerol lipas 96.2 0.0092 2E-07 48.8 4.9 39 112-150 208-246 (413)
220 PF11288 DUF3089: Protein of u 96.2 0.011 2.3E-07 43.6 4.6 74 76-151 39-116 (207)
221 PLN02847 triacylglycerol lipas 96.1 0.026 5.6E-07 48.2 7.2 37 112-150 235-271 (633)
222 PF07519 Tannase: Tannase and 96.1 0.075 1.6E-06 45.3 10.0 119 41-167 16-151 (474)
223 PLN03037 lipase class 3 family 96.0 0.0085 1.8E-07 50.2 4.0 38 111-150 301-338 (525)
224 PLN02324 triacylglycerol lipas 96.0 0.013 2.9E-07 47.8 4.7 40 111-150 196-235 (415)
225 PLN00413 triacylglycerol lipas 96.0 0.011 2.4E-07 49.0 4.3 33 115-149 271-303 (479)
226 COG4947 Uncharacterized protei 95.9 0.033 7.1E-07 39.1 5.8 38 129-167 100-137 (227)
227 PLN02934 triacylglycerol lipas 95.8 0.012 2.6E-07 49.2 4.1 34 114-149 307-340 (515)
228 PLN02802 triacylglycerol lipas 95.7 0.017 3.7E-07 48.3 4.5 39 112-150 312-350 (509)
229 COG5153 CVT17 Putative lipase 95.7 0.024 5.1E-07 43.3 4.7 44 107-152 255-298 (425)
230 KOG4540 Putative lipase essent 95.7 0.024 5.1E-07 43.3 4.7 44 107-152 255-298 (425)
231 KOG1202 Animal-type fatty acid 95.6 0.053 1.1E-06 50.1 7.1 97 53-166 2121-2219(2376)
232 COG4287 PqaA PhoPQ-activated p 95.4 0.051 1.1E-06 43.3 6.0 62 245-314 326-387 (507)
233 PLN02761 lipase class 3 family 95.3 0.028 6.1E-07 47.2 4.5 39 112-150 272-314 (527)
234 PLN02753 triacylglycerol lipas 95.2 0.031 6.7E-07 47.1 4.5 40 111-150 290-332 (531)
235 PLN02719 triacylglycerol lipas 95.0 0.039 8.4E-07 46.3 4.4 40 111-150 276-318 (518)
236 PF08237 PE-PPE: PE-PPE domain 94.7 0.14 3E-06 38.8 6.5 64 83-150 2-68 (225)
237 KOG4372 Predicted alpha/beta h 94.5 0.04 8.6E-07 44.6 3.2 89 53-150 78-170 (405)
238 PF03283 PAE: Pectinacetyleste 94.2 1.8 3.8E-05 35.7 12.1 39 112-150 138-176 (361)
239 KOG4569 Predicted lipase [Lipi 94.2 0.067 1.5E-06 43.4 4.0 37 112-150 155-191 (336)
240 PF05277 DUF726: Protein of un 93.8 0.24 5.2E-06 40.0 6.3 39 129-167 219-261 (345)
241 KOG2029 Uncharacterized conser 91.9 0.27 5.7E-06 42.1 4.3 57 110-166 506-572 (697)
242 KOG4389 Acetylcholinesterase/B 90.4 0.87 1.9E-05 38.3 5.7 97 42-144 121-232 (601)
243 TIGR03712 acc_sec_asp2 accesso 90.0 11 0.00024 32.1 19.2 118 37-167 272-391 (511)
244 PF09994 DUF2235: Uncharacteri 90.0 3.6 7.9E-05 32.5 8.8 95 55-150 1-112 (277)
245 PF09949 DUF2183: Uncharacteri 89.5 4.1 9E-05 26.3 7.4 84 71-161 12-97 (100)
246 PF07519 Tannase: Tannase and 88.5 1.2 2.6E-05 38.3 5.5 66 247-314 352-427 (474)
247 COG3673 Uncharacterized conser 83.3 13 0.00029 29.7 8.3 97 53-150 29-142 (423)
248 PRK12467 peptide synthase; Pro 82.6 15 0.00033 41.2 11.2 97 55-162 3692-3791(3956)
249 PRK02399 hypothetical protein; 79.7 23 0.0005 29.6 8.8 100 59-161 6-127 (406)
250 cd03818 GT1_ExpC_like This fam 78.6 16 0.00035 30.6 8.2 37 58-97 2-38 (396)
251 PF06792 UPF0261: Uncharacteri 78.4 21 0.00046 29.8 8.3 101 57-161 3-125 (403)
252 COG4822 CbiK Cobalamin biosynt 77.7 23 0.00049 26.5 7.4 40 53-92 136-176 (265)
253 PF08484 Methyltransf_14: C-me 76.9 11 0.00023 27.0 5.6 53 107-164 50-102 (160)
254 COG0529 CysC Adenylylsulfate k 75.9 6.5 0.00014 28.5 4.2 39 53-91 20-59 (197)
255 cd01714 ETF_beta The electron 75.4 15 0.00032 27.5 6.4 72 76-162 69-145 (202)
256 KOG2385 Uncharacterized conser 73.2 11 0.00023 32.3 5.5 40 129-169 446-490 (633)
257 PF12242 Eno-Rase_NADH_b: NAD( 72.0 16 0.00036 22.1 4.6 45 108-152 17-62 (78)
258 COG3340 PepE Peptidase E [Amin 70.7 11 0.00025 28.1 4.6 39 54-92 31-71 (224)
259 PF06309 Torsin: Torsin; Inte 69.7 7 0.00015 26.5 3.1 63 53-125 50-120 (127)
260 PRK05571 ribose-5-phosphate is 68.5 38 0.00083 23.8 6.6 75 73-164 16-90 (148)
261 PF10605 3HBOH: 3HB-oligomer h 68.4 17 0.00036 32.1 5.7 38 132-169 287-324 (690)
262 PRK05282 (alpha)-aspartyl dipe 67.1 56 0.0012 25.2 8.1 38 55-92 31-70 (233)
263 TIGR02884 spore_pdaA delta-lac 66.7 8 0.00017 29.5 3.4 36 55-90 186-221 (224)
264 TIGR02069 cyanophycinase cyano 65.4 57 0.0012 25.5 7.8 40 53-92 26-66 (250)
265 PF01583 APS_kinase: Adenylyls 61.8 16 0.00035 26.0 3.9 38 55-92 1-39 (156)
266 TIGR00689 rpiB_lacA_lacB sugar 61.1 55 0.0012 23.0 6.6 74 73-164 14-87 (144)
267 COG0031 CysK Cysteine synthase 61.1 86 0.0019 25.2 8.6 121 34-164 144-291 (300)
268 PF00698 Acyl_transf_1: Acyl t 60.9 8.7 0.00019 31.2 2.8 21 130-150 84-104 (318)
269 PF10081 Abhydrolase_9: Alpha/ 60.9 18 0.00039 28.5 4.2 38 129-167 108-148 (289)
270 PF02502 LacAB_rpiB: Ribose/Ga 60.4 45 0.00097 23.3 5.8 74 73-164 15-88 (140)
271 COG3727 Vsr DNA G:T-mismatch r 60.3 16 0.00035 24.8 3.4 15 75-89 100-114 (150)
272 TIGR02873 spore_ylxY probable 60.0 11 0.00024 29.7 3.1 34 56-90 231-264 (268)
273 cd03146 GAT1_Peptidase_E Type 58.8 49 0.0011 25.0 6.3 40 54-93 30-70 (212)
274 TIGR01119 lacB galactose-6-pho 58.6 68 0.0015 23.3 6.7 75 72-164 15-89 (171)
275 TIGR03709 PPK2_rel_1 polyphosp 58.6 15 0.00033 28.8 3.6 38 55-92 55-93 (264)
276 TIGR02764 spore_ybaN_pdaB poly 58.5 8.7 0.00019 28.3 2.3 34 56-90 152-188 (191)
277 PF00326 Peptidase_S9: Prolyl 58.5 29 0.00062 26.0 5.2 43 54-96 143-187 (213)
278 PRK09273 hypothetical protein; 58.3 75 0.0016 23.9 6.8 78 71-164 18-95 (211)
279 COG1073 Hydrolases of the alph 57.9 0.65 1.4E-05 36.8 -4.1 106 41-152 32-154 (299)
280 TIGR03707 PPK2_P_aer polyphosp 56.3 18 0.00038 27.8 3.5 70 55-142 30-101 (230)
281 cd07198 Patatin Patatin-like p 56.2 23 0.0005 25.6 4.1 23 131-153 27-49 (172)
282 KOG1252 Cystathionine beta-syn 55.9 1.1E+02 0.0025 25.0 8.3 59 34-94 187-250 (362)
283 cd05312 NAD_bind_1_malic_enz N 55.2 26 0.00056 27.8 4.3 83 57-148 26-124 (279)
284 cd07207 Pat_ExoU_VipD_like Exo 55.2 23 0.00049 26.1 4.0 22 131-152 28-49 (194)
285 PF02230 Abhydrolase_2: Phosph 55.1 33 0.00071 25.9 5.0 58 55-120 155-214 (216)
286 PF14606 Lipase_GDSL_3: GDSL-l 54.8 33 0.00072 25.0 4.5 13 83-95 33-45 (178)
287 KOG1199 Short-chain alcohol de 54.1 77 0.0017 23.0 6.1 85 55-146 8-98 (260)
288 smart00827 PKS_AT Acyl transfe 53.9 14 0.00031 29.5 3.0 20 131-150 83-102 (298)
289 TIGR01120 rpiB ribose 5-phosph 53.5 76 0.0016 22.3 6.7 74 73-164 15-88 (143)
290 TIGR01118 lacA galactose-6-pho 53.2 76 0.0016 22.2 5.9 73 72-164 15-87 (141)
291 PRK08622 galactose-6-phosphate 52.9 87 0.0019 22.8 6.6 75 72-164 15-89 (171)
292 PRK05579 bifunctional phosphop 52.8 1.3E+02 0.0028 25.6 8.3 75 55-137 116-196 (399)
293 PLN02748 tRNA dimethylallyltra 52.6 1.3E+02 0.0027 26.3 8.2 78 54-138 20-120 (468)
294 PRK06171 sorbitol-6-phosphate 52.5 58 0.0013 25.4 6.2 33 58-93 11-43 (266)
295 cd07225 Pat_PNPLA6_PNPLA7 Pata 52.5 26 0.00056 28.3 4.1 21 131-151 44-64 (306)
296 PRK12724 flagellar biosynthesi 52.1 1.5E+02 0.0033 25.4 8.5 75 76-162 292-367 (432)
297 TIGR03131 malonate_mdcH malona 51.4 17 0.00036 29.1 3.0 21 130-150 76-96 (295)
298 PTZ00445 p36-lilke protein; Pr 50.8 61 0.0013 24.5 5.4 66 71-140 30-102 (219)
299 PRK13256 thiopurine S-methyltr 50.5 17 0.00038 27.7 2.7 29 58-92 46-74 (226)
300 PF05724 TPMT: Thiopurine S-me 50.2 35 0.00076 25.9 4.3 30 57-92 39-68 (218)
301 PRK12615 galactose-6-phosphate 50.1 97 0.0021 22.5 6.5 74 73-164 16-89 (171)
302 cd07210 Pat_hypo_W_succinogene 50.1 33 0.00073 26.1 4.3 22 131-152 29-50 (221)
303 COG3946 VirJ Type IV secretory 49.9 59 0.0013 27.3 5.6 109 53-164 46-155 (456)
304 PRK10279 hypothetical protein; 49.8 27 0.00059 28.1 3.9 21 131-151 34-54 (300)
305 COG1255 Uncharacterized protei 49.5 21 0.00046 23.7 2.6 22 71-92 24-45 (129)
306 PRK06490 glutamine amidotransf 49.3 1.2E+02 0.0027 23.5 9.5 84 55-148 8-103 (239)
307 PRK00091 miaA tRNA delta(2)-is 49.2 1.2E+02 0.0025 24.7 7.2 66 56-124 4-92 (307)
308 COG1087 GalE UDP-glucose 4-epi 48.8 1E+02 0.0022 24.9 6.5 37 58-98 3-39 (329)
309 PF11713 Peptidase_C80: Peptid 48.7 10 0.00023 26.9 1.3 54 89-142 59-116 (157)
310 PF03976 PPK2: Polyphosphate k 48.4 11 0.00024 28.8 1.4 38 55-92 30-68 (228)
311 TIGR00128 fabD malonyl CoA-acy 47.7 20 0.00043 28.5 2.9 20 131-150 84-103 (290)
312 cd07227 Pat_Fungal_NTE1 Fungal 47.4 26 0.00055 27.7 3.3 20 132-151 40-59 (269)
313 COG3933 Transcriptional antite 47.4 1.3E+02 0.0028 25.8 7.3 75 55-148 109-183 (470)
314 cd07209 Pat_hypo_Ecoli_Z1214_l 47.3 35 0.00076 25.8 4.0 22 131-152 27-48 (215)
315 TIGR03127 RuMP_HxlB 6-phospho 47.3 58 0.0013 23.7 5.1 32 58-90 32-63 (179)
316 PRK08621 galactose-6-phosphate 46.1 1E+02 0.0022 21.6 5.8 73 72-164 15-87 (142)
317 PF09370 TIM-br_sig_trns: TIM- 46.0 34 0.00075 26.7 3.7 83 75-165 162-249 (268)
318 PF06833 MdcE: Malonate decarb 45.7 52 0.0011 25.2 4.5 56 84-145 66-123 (234)
319 cd07228 Pat_NTE_like_bacteria 45.2 44 0.00096 24.2 4.1 23 131-153 29-51 (175)
320 cd07212 Pat_PNPLA9 Patatin-lik 44.6 21 0.00045 29.0 2.5 19 133-151 35-53 (312)
321 PTZ00215 ribose 5-phosphate is 44.4 1.1E+02 0.0025 21.7 6.6 75 72-164 17-93 (151)
322 PRK06731 flhF flagellar biosyn 44.3 1.6E+02 0.0035 23.4 7.7 65 83-162 154-219 (270)
323 COG0331 FabD (acyl-carrier-pro 44.3 33 0.00072 27.7 3.6 21 129-149 84-104 (310)
324 PF05673 DUF815: Protein of un 43.9 1.5E+02 0.0033 23.1 6.8 18 72-89 69-86 (249)
325 cd07205 Pat_PNPLA6_PNPLA7_NTE1 43.8 48 0.001 24.0 4.2 21 131-151 29-49 (175)
326 COG2845 Uncharacterized protei 43.5 1.8E+02 0.0039 23.7 7.3 115 129-255 116-233 (354)
327 TIGR00632 vsr DNA mismatch end 43.2 72 0.0016 21.4 4.4 14 76-89 100-113 (117)
328 PRK11613 folP dihydropteroate 42.7 1.8E+02 0.0038 23.4 7.7 55 74-142 167-223 (282)
329 COG0698 RpiB Ribose 5-phosphat 41.6 1.3E+02 0.0027 21.4 7.0 76 73-165 16-91 (151)
330 PF03853 YjeF_N: YjeF-related 41.5 41 0.0009 24.3 3.5 35 54-89 24-58 (169)
331 COG1752 RssA Predicted esteras 40.5 35 0.00077 27.5 3.3 22 131-152 40-61 (306)
332 PF00448 SRP54: SRP54-type pro 40.2 1.3E+02 0.0029 22.4 6.0 73 75-162 75-148 (196)
333 KOG2941 Beta-1,4-mannosyltrans 40.0 39 0.00084 27.7 3.3 41 53-97 11-51 (444)
334 PF01012 ETF: Electron transfe 40.0 1.4E+02 0.003 21.3 6.7 63 74-151 49-113 (164)
335 KOG2872 Uroporphyrinogen decar 40.0 45 0.00097 26.4 3.5 30 55-92 252-281 (359)
336 PF14403 CP_ATPgrasp_2: Circul 39.6 66 0.0014 27.6 4.7 86 47-140 179-277 (445)
337 PRK12613 galactose-6-phosphate 39.6 1.3E+02 0.0029 21.0 5.9 72 72-164 15-86 (141)
338 PF09419 PGP_phosphatase: Mito 39.3 82 0.0018 22.8 4.5 53 79-140 36-88 (168)
339 KOG3551 Syntrophins (type beta 39.0 31 0.00067 28.4 2.6 40 28-67 449-497 (506)
340 cd07208 Pat_hypo_Ecoli_yjju_li 38.8 55 0.0012 25.7 4.1 23 132-154 29-51 (266)
341 PRK13255 thiopurine S-methyltr 38.8 42 0.00091 25.5 3.3 16 76-91 52-67 (218)
342 PRK14729 miaA tRNA delta(2)-is 38.4 2.2E+02 0.0047 23.1 8.0 75 57-138 5-101 (300)
343 KOG1201 Hydroxysteroid 17-beta 38.2 1.4E+02 0.003 24.0 5.9 38 55-95 37-74 (300)
344 PF02065 Melibiase: Melibiase; 38.0 98 0.0021 26.2 5.5 68 72-143 172-239 (394)
345 PF04084 ORC2: Origin recognit 37.7 2.1E+02 0.0045 23.6 7.1 15 129-143 136-150 (326)
346 KOG0781 Signal recognition par 37.4 1.2E+02 0.0026 26.3 5.7 87 60-162 443-538 (587)
347 KOG1752 Glutaredoxin and relat 37.3 1.2E+02 0.0026 19.9 5.2 77 54-150 13-89 (104)
348 PF14253 AbiH: Bacteriophage a 37.2 19 0.00041 28.3 1.3 14 129-142 234-247 (270)
349 PF05577 Peptidase_S28: Serine 36.9 75 0.0016 27.2 4.9 42 249-295 377-418 (434)
350 COG0218 Predicted GTPase [Gene 36.9 21 0.00046 26.5 1.4 64 242-313 129-198 (200)
351 cd03129 GAT1_Peptidase_E_like 36.6 1.8E+02 0.004 21.8 7.5 39 54-92 28-66 (210)
352 cd07218 Pat_iPLA2 Calcium-inde 36.4 72 0.0016 24.8 4.2 20 133-152 33-52 (245)
353 PF03721 UDPG_MGDP_dh_N: UDP-g 36.4 52 0.0011 24.2 3.3 30 59-92 3-32 (185)
354 PF03205 MobB: Molybdopterin g 36.2 87 0.0019 21.8 4.3 41 58-98 2-43 (140)
355 cd07230 Pat_TGL4-5_like Triacy 35.8 46 0.00099 28.4 3.3 24 131-154 102-125 (421)
356 cd07204 Pat_PNPLA_like Patatin 35.7 67 0.0015 24.9 4.0 20 133-152 34-53 (243)
357 COG0426 FpaA Uncharacterized f 35.5 2.7E+02 0.006 23.5 7.6 74 56-154 249-331 (388)
358 COG1506 DAP2 Dipeptidyl aminop 35.5 1.4E+02 0.003 27.2 6.4 45 53-97 549-595 (620)
359 TIGR03840 TMPT_Se_Te thiopurin 35.2 49 0.0011 25.1 3.1 16 76-91 49-64 (213)
360 cd00842 MPP_ASMase acid sphing 35.2 1E+02 0.0022 24.7 5.1 27 107-137 195-221 (296)
361 PLN02840 tRNA dimethylallyltra 34.7 2.7E+02 0.0059 23.9 7.4 31 104-138 89-119 (421)
362 KOG1200 Mitochondrial/plastidi 34.7 2E+02 0.0043 21.7 6.1 33 57-92 15-47 (256)
363 TIGR00521 coaBC_dfp phosphopan 34.4 2.9E+02 0.0063 23.5 8.3 89 56-150 113-224 (390)
364 TIGR02816 pfaB_fam PfaB family 34.4 42 0.00092 29.6 3.0 23 129-151 264-286 (538)
365 COG3007 Uncharacterized paraqu 34.1 1.8E+02 0.004 23.4 5.9 41 112-152 22-64 (398)
366 PF03681 UPF0150: Uncharacteri 34.0 43 0.00093 17.9 2.0 34 81-120 11-44 (48)
367 PRK14974 cell division protein 34.0 2.7E+02 0.0059 23.0 7.7 67 81-162 220-287 (336)
368 TIGR03708 poly_P_AMP_trns poly 33.9 73 0.0016 27.8 4.2 40 54-93 38-78 (493)
369 COG0541 Ffh Signal recognition 33.9 2E+02 0.0043 24.7 6.4 71 77-162 176-247 (451)
370 COG0482 TrmU Predicted tRNA(5- 33.9 1.3E+02 0.0029 24.9 5.4 61 55-123 4-64 (356)
371 PHA02114 hypothetical protein 33.8 79 0.0017 20.2 3.3 34 55-89 82-115 (127)
372 PRK06523 short chain dehydroge 33.8 1.5E+02 0.0032 23.0 5.8 32 58-92 11-42 (260)
373 PF03033 Glyco_transf_28: Glyc 33.6 42 0.00092 22.9 2.5 34 58-92 2-35 (139)
374 cd05005 SIS_PHI Hexulose-6-pho 33.5 1.5E+02 0.0033 21.5 5.4 31 59-90 36-66 (179)
375 cd07224 Pat_like Patatin-like 33.5 67 0.0014 24.7 3.7 21 132-152 31-51 (233)
376 PF13207 AAA_17: AAA domain; P 33.1 59 0.0013 21.5 3.0 31 58-91 1-32 (121)
377 TIGR02133 RPI_actino ribose 5- 33.1 1.5E+02 0.0033 20.9 5.0 75 73-164 16-90 (148)
378 PF06500 DUF1100: Alpha/beta h 33.0 66 0.0014 27.2 3.7 65 248-314 189-255 (411)
379 PRK13690 hypothetical protein; 32.7 1E+02 0.0022 22.4 4.0 33 107-139 3-35 (184)
380 COG1832 Predicted CoA-binding 32.4 1.2E+02 0.0026 21.1 4.1 33 60-92 20-52 (140)
381 PF01734 Patatin: Patatin-like 31.8 52 0.0011 23.8 2.9 21 131-151 28-48 (204)
382 cd07232 Pat_PLPL Patain-like p 31.5 75 0.0016 27.0 3.9 24 131-154 96-119 (407)
383 PTZ00317 NADP-dependent malic 31.5 85 0.0018 27.8 4.2 80 58-145 299-397 (559)
384 PF01118 Semialdhyde_dh: Semia 31.5 72 0.0016 21.3 3.2 31 131-163 1-32 (121)
385 PF00731 AIRC: AIR carboxylase 31.5 1.9E+02 0.0042 20.5 5.7 84 56-159 1-84 (150)
386 PRK14194 bifunctional 5,10-met 31.3 69 0.0015 25.8 3.4 38 111-150 143-182 (301)
387 COG4213 XylF ABC-type xylose t 30.9 3E+02 0.0064 22.5 7.2 78 55-138 81-161 (341)
388 cd05014 SIS_Kpsf KpsF-like pro 30.8 1.1E+02 0.0023 20.6 4.0 31 59-90 3-33 (128)
389 PRK00889 adenylylsulfate kinas 30.8 1.1E+02 0.0023 22.2 4.2 37 55-91 3-40 (175)
390 PRK11460 putative hydrolase; P 30.7 2E+02 0.0043 22.1 5.8 43 54-96 147-191 (232)
391 COG2939 Carboxypeptidase C (ca 30.1 76 0.0017 27.5 3.6 61 248-312 425-489 (498)
392 PF01656 CbiA: CobQ/CobB/MinD/ 30.1 89 0.0019 22.8 3.8 22 71-92 15-36 (195)
393 PRK13529 malate dehydrogenase; 29.5 88 0.0019 27.8 4.0 80 57-145 296-398 (563)
394 KOG0855 Alkyl hydroperoxide re 29.4 2.2E+02 0.0048 20.6 6.1 58 29-90 68-131 (211)
395 KOG2805 tRNA (5-methylaminomet 29.4 1.5E+02 0.0032 24.1 4.8 64 54-123 5-68 (377)
396 cd07229 Pat_TGL3_like Triacylg 29.3 71 0.0015 26.9 3.3 23 131-153 112-134 (391)
397 PF03949 Malic_M: Malic enzyme 29.1 84 0.0018 24.6 3.5 84 58-149 27-126 (255)
398 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.8 98 0.0021 25.0 3.9 23 131-153 98-120 (298)
399 PRK15482 transcriptional regul 28.7 73 0.0016 25.4 3.3 31 59-90 138-168 (285)
400 TIGR00174 miaA tRNA isopenteny 28.6 2.1E+02 0.0046 23.0 5.7 30 105-138 68-97 (287)
401 PRK09072 short chain dehydroge 28.4 1E+02 0.0022 24.0 4.1 32 58-92 7-38 (263)
402 KOG1209 1-Acyl dihydroxyaceton 28.3 1.3E+02 0.0027 23.0 4.0 36 55-92 6-41 (289)
403 cd07231 Pat_SDP1-like Sugar-De 28.3 1E+02 0.0022 25.1 3.9 20 131-150 97-116 (323)
404 cd01983 Fer4_NifH The Fer4_Nif 28.3 1.2E+02 0.0026 18.6 3.8 20 71-90 15-34 (99)
405 TIGR01425 SRP54_euk signal rec 28.0 2.2E+02 0.0048 24.5 6.0 69 78-161 177-246 (429)
406 cd07213 Pat17_PNPLA8_PNPLA9_li 28.0 55 0.0012 26.2 2.5 19 133-151 37-55 (288)
407 cd07211 Pat_PNPLA8 Patatin-lik 27.8 49 0.0011 26.8 2.2 17 133-149 44-60 (308)
408 cd01971 Nitrogenase_VnfN_like 27.8 3.3E+02 0.0071 23.4 7.1 75 56-138 87-164 (427)
409 cd01523 RHOD_Lact_B Member of 27.8 1.5E+02 0.0033 18.7 4.2 29 54-87 61-89 (100)
410 PRK01254 hypothetical protein; 27.6 2.1E+02 0.0044 26.3 5.9 37 57-93 41-79 (707)
411 PRK06849 hypothetical protein; 27.4 1.5E+02 0.0032 25.0 5.0 22 73-94 18-39 (389)
412 PF10686 DUF2493: Protein of u 27.3 62 0.0013 19.4 2.0 32 55-89 31-63 (71)
413 PF00004 AAA: ATPase family as 27.2 1.9E+02 0.0042 19.1 5.5 54 59-123 1-55 (132)
414 COG1856 Uncharacterized homolo 27.1 3E+02 0.0064 21.3 6.0 74 75-152 102-179 (275)
415 COG4425 Predicted membrane pro 27.1 4.2E+02 0.0091 23.0 10.2 32 111-145 381-412 (588)
416 COG0022 AcoB Pyruvate/2-oxoglu 27.0 2.5E+02 0.0054 22.8 5.6 57 74-150 217-278 (324)
417 cd07217 Pat17_PNPLA8_PNPLA9_li 26.9 60 0.0013 26.8 2.5 18 133-150 44-61 (344)
418 KOG2170 ATPase of the AAA+ sup 26.9 90 0.0019 25.2 3.3 31 53-83 107-138 (344)
419 PRK00865 glutamate racemase; P 26.9 2.2E+02 0.0048 22.4 5.6 47 265-313 19-65 (261)
420 COG1066 Sms Predicted ATP-depe 26.8 4E+02 0.0087 22.9 7.0 64 71-138 156-219 (456)
421 COG0552 FtsY Signal recognitio 26.8 3.7E+02 0.008 22.3 8.2 82 71-162 210-292 (340)
422 PRK13230 nitrogenase reductase 26.5 1.1E+02 0.0024 24.2 4.0 40 57-97 3-43 (279)
423 cd04950 GT1_like_1 Glycosyltra 26.4 1.5E+02 0.0032 24.7 4.9 39 56-94 5-44 (373)
424 cd01819 Patatin_and_cPLA2 Pata 26.2 1.2E+02 0.0027 21.4 3.8 18 131-148 29-46 (155)
425 KOG1465 Translation initiation 26.1 3.5E+02 0.0076 21.9 6.2 36 131-170 233-278 (353)
426 PRK13869 plasmid-partitioning 26.1 1.2E+02 0.0027 25.7 4.3 25 71-95 138-162 (405)
427 COG3887 Predicted signaling pr 25.9 2E+02 0.0043 25.9 5.3 51 108-164 320-376 (655)
428 COG1709 Predicted transcriptio 25.7 3.1E+02 0.0067 21.0 6.3 62 20-88 159-225 (241)
429 PRK12745 3-ketoacyl-(acyl-carr 25.6 2.6E+02 0.0055 21.5 5.9 31 59-92 5-35 (256)
430 PF12122 DUF3582: Protein of u 25.6 99 0.0021 20.1 2.9 50 264-313 10-60 (101)
431 PRK08220 2,3-dihydroxybenzoate 25.6 2.7E+02 0.0059 21.3 6.0 32 59-93 11-42 (252)
432 PLN02752 [acyl-carrier protein 25.5 57 0.0012 26.9 2.2 19 132-150 126-144 (343)
433 PF08497 Radical_SAM_N: Radica 25.4 3.3E+02 0.0071 22.0 6.0 37 56-92 17-55 (302)
434 PRK04148 hypothetical protein; 25.3 2.3E+02 0.005 19.7 4.7 22 129-150 17-38 (134)
435 PRK12828 short chain dehydroge 25.3 1.3E+02 0.0028 22.7 4.1 31 58-91 9-39 (239)
436 PF12780 AAA_8: P-loop contain 25.3 2.8E+02 0.006 22.0 5.8 57 55-124 31-87 (268)
437 PRK02399 hypothetical protein; 25.2 1.8E+02 0.0038 24.7 4.8 42 55-97 185-226 (406)
438 PRK10867 signal recognition pa 25.2 4.5E+02 0.0098 22.8 8.7 69 78-161 178-247 (433)
439 PRK00652 lpxK tetraacyldisacch 25.1 1.9E+02 0.0042 23.7 5.0 27 71-98 67-93 (325)
440 cd03131 GATase1_HTS Type 1 glu 25.0 38 0.00082 24.7 1.0 36 110-151 83-118 (175)
441 PF12641 Flavodoxin_3: Flavodo 24.9 2.7E+02 0.0058 20.0 5.8 60 248-313 39-98 (160)
442 PRK07053 glutamine amidotransf 24.9 3.3E+02 0.0071 21.1 8.8 83 55-148 3-100 (234)
443 PRK05368 homoserine O-succinyl 24.7 1.1E+02 0.0024 24.8 3.5 34 111-150 121-154 (302)
444 COG4221 Short-chain alcohol de 24.7 1.5E+02 0.0032 23.1 4.0 34 56-92 6-39 (246)
445 TIGR00682 lpxK tetraacyldisacc 24.6 1.6E+02 0.0034 24.0 4.5 42 56-98 28-72 (311)
446 PF05973 Gp49: Phage derived p 24.6 1.3E+02 0.0027 18.9 3.3 28 32-65 43-72 (91)
447 PF03698 UPF0180: Uncharacteri 24.5 86 0.0019 19.4 2.3 19 72-90 10-28 (80)
448 PRK14581 hmsF outer membrane N 24.5 99 0.0021 28.3 3.6 37 54-90 47-92 (672)
449 TIGR01278 DPOR_BchB light-inde 24.5 4.1E+02 0.009 23.6 7.3 77 55-139 85-168 (511)
450 PRK12748 3-ketoacyl-(acyl-carr 24.4 1.5E+02 0.0033 22.9 4.4 34 58-92 7-40 (256)
451 cd01520 RHOD_YbbB Member of th 24.4 1.7E+02 0.0037 19.8 4.1 34 53-90 85-118 (128)
452 PRK07326 short chain dehydroge 24.4 1.5E+02 0.0033 22.4 4.3 31 58-91 8-38 (237)
453 PF06792 UPF0261: Uncharacteri 24.4 1.5E+02 0.0033 25.1 4.3 43 54-97 183-225 (403)
454 COG5441 Uncharacterized conser 24.4 3.9E+02 0.0084 21.7 8.0 96 57-154 3-117 (401)
455 PRK08415 enoyl-(acyl carrier p 24.3 1.5E+02 0.0034 23.3 4.4 33 58-91 7-39 (274)
456 PF04763 DUF562: Protein of un 24.3 2.5E+02 0.0055 19.5 4.9 41 53-93 15-61 (146)
457 PF03575 Peptidase_S51: Peptid 24.0 83 0.0018 22.2 2.6 13 132-144 70-82 (154)
458 COG0324 MiaA tRNA delta(2)-iso 24.0 4E+02 0.0087 21.8 7.7 76 56-138 3-101 (308)
459 PRK08177 short chain dehydroge 24.0 1.5E+02 0.0032 22.4 4.2 31 59-92 4-34 (225)
460 PLN02924 thymidylate kinase 23.7 1.8E+02 0.004 22.2 4.5 41 53-93 13-54 (220)
461 COG3640 CooC CO dehydrogenase 23.7 1.5E+02 0.0032 23.1 3.8 62 59-124 3-69 (255)
462 PF07279 DUF1442: Protein of u 23.7 2.5E+02 0.0053 21.5 4.9 47 112-164 27-77 (218)
463 KOG2182 Hydrolytic enzymes of 23.5 1.8E+02 0.004 25.3 4.7 63 248-315 433-503 (514)
464 cd01521 RHOD_PspE2 Member of t 23.4 2.2E+02 0.0047 18.5 4.9 34 54-90 64-97 (110)
465 PRK03094 hypothetical protein; 23.4 1E+02 0.0023 19.0 2.5 19 72-90 10-28 (80)
466 PLN03050 pyridoxine (pyridoxam 23.3 1.7E+02 0.0038 22.8 4.3 33 57-90 62-94 (246)
467 PRK11557 putative DNA-binding 23.2 1.5E+02 0.0032 23.5 4.1 30 59-89 131-160 (278)
468 COG0746 MobA Molybdopterin-gua 23.2 3.2E+02 0.007 20.3 6.1 67 244-314 82-150 (192)
469 PRK06603 enoyl-(acyl carrier p 23.1 1.6E+02 0.0034 23.0 4.3 32 58-90 10-41 (260)
470 TIGR03708 poly_P_AMP_trns poly 23.1 1.1E+02 0.0024 26.7 3.5 71 53-141 296-368 (493)
471 PRK14179 bifunctional 5,10-met 23.1 1.2E+02 0.0027 24.2 3.5 37 112-150 143-181 (284)
472 PRK13938 phosphoheptose isomer 22.9 2.3E+02 0.005 21.2 4.8 24 129-152 45-68 (196)
473 PF03686 UPF0146: Uncharacteri 22.9 95 0.0021 21.2 2.4 23 72-94 25-47 (127)
474 cd00762 NAD_bind_malic_enz NAD 22.8 1.2E+02 0.0026 23.8 3.3 83 58-148 27-125 (254)
475 cd00951 KDGDH 5-dehydro-4-deox 22.7 4.1E+02 0.0088 21.3 7.9 85 71-167 22-106 (289)
476 PF02882 THF_DHG_CYH_C: Tetrah 22.6 1.4E+02 0.003 21.5 3.4 41 108-150 17-59 (160)
477 PF01580 FtsK_SpoIIIE: FtsK/Sp 22.5 2.9E+02 0.0063 20.5 5.4 41 57-97 40-84 (205)
478 cd02036 MinD Bacterial cell di 22.5 1.4E+02 0.003 21.4 3.6 22 71-92 16-37 (179)
479 PRK06953 short chain dehydroge 22.5 1.7E+02 0.0037 22.0 4.2 31 59-92 4-34 (222)
480 PF10561 UPF0565: Uncharacteri 22.3 94 0.002 25.1 2.7 22 129-150 192-213 (303)
481 cd01518 RHOD_YceA Member of th 22.3 1.9E+02 0.0041 18.3 3.9 32 54-90 61-93 (101)
482 PRK09135 pteridine reductase; 22.2 1.7E+02 0.0036 22.4 4.2 32 58-92 8-39 (249)
483 PRK07984 enoyl-(acyl carrier p 22.2 1.7E+02 0.0037 22.9 4.3 32 58-90 8-39 (262)
484 PRK06505 enoyl-(acyl carrier p 22.1 1.7E+02 0.0038 23.0 4.3 32 58-90 9-40 (271)
485 PRK05717 oxidoreductase; Valid 22.1 1.7E+02 0.0036 22.6 4.2 31 58-91 12-42 (255)
486 KOG3086 Predicted dioxygenase 22.0 2.1E+02 0.0046 22.2 4.3 60 106-168 18-81 (296)
487 TIGR02683 upstrm_HI1419 probab 22.0 1.7E+02 0.0036 18.6 3.4 27 33-65 50-77 (95)
488 PF00148 Oxidored_nitro: Nitro 21.9 2.5E+02 0.0055 23.7 5.5 62 71-140 92-156 (398)
489 PRK05876 short chain dehydroge 21.9 1.7E+02 0.0036 23.1 4.2 32 58-92 8-39 (275)
490 PF13728 TraF: F plasmid trans 21.9 2.5E+02 0.0055 21.4 4.9 42 55-97 122-164 (215)
491 COG1448 TyrB Aspartate/tyrosin 21.8 5E+02 0.011 22.0 6.9 88 54-164 170-263 (396)
492 PF08433 KTI12: Chromatin asso 21.8 3E+02 0.0065 21.9 5.4 39 57-95 2-41 (270)
493 cd01981 Pchlide_reductase_B Pc 21.7 4.6E+02 0.01 22.6 7.0 77 55-139 85-172 (430)
494 cd07199 Pat17_PNPLA8_PNPLA9_li 21.7 71 0.0015 25.0 2.0 18 133-150 37-54 (258)
495 PF10691 DUF2497: Protein of u 21.5 64 0.0014 19.5 1.3 19 299-317 39-57 (73)
496 TIGR02883 spore_cwlD N-acetylm 21.5 3.3E+02 0.0072 20.1 5.4 12 86-98 2-13 (189)
497 TIGR01279 DPOR_bchN light-inde 21.4 4.3E+02 0.0093 22.6 6.6 80 55-142 84-166 (407)
498 cd07216 Pat17_PNPLA8_PNPLA9_li 21.4 67 0.0015 26.0 1.9 17 133-149 45-61 (309)
499 PRK08339 short chain dehydroge 21.4 1.9E+02 0.004 22.6 4.3 31 58-91 10-40 (263)
500 PRK06091 membrane protein FdrA 21.4 6.1E+02 0.013 22.9 8.1 86 55-163 142-227 (555)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-47 Score=282.15 Aligned_cols=306 Identities=45% Similarity=0.820 Sum_probs=285.9
Q ss_pred CCCCCCCCCCCccccccccCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHhhCCcE
Q 020633 8 ETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFATWGYA 85 (323)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~ 85 (323)
...+.+|......+++...++.....++++.+| +|.+..|.|.++ +++..|+++||++.++.+.|+.++..|+..||.
T Consensus 5 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~ 84 (313)
T KOG1455|consen 5 ANRRSLAGELSEEEYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFA 84 (313)
T ss_pred ccCcccccccchhhhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCe
Confidence 345667888888888888888889999999999 999999999653 788999999999999888999999999999999
Q ss_pred EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 86 VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 86 v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
|+++|++|||.|++...+..+++..++|+...++.+..+....+.+..++||||||.+++.++.++|+. .+++|+++|.
T Consensus 85 v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~-w~G~ilvaPm 163 (313)
T KOG1455|consen 85 VYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF-WDGAILVAPM 163 (313)
T ss_pred EEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc-cccceeeecc
Confidence 999999999999999999999999999999999998777665678999999999999999999999998 9999999999
Q ss_pred ccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC
Q 020633 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
+...+...+.+....+...+..+.+.|...+.+......++++..+.....++..+...+++....++++...++...+.
T Consensus 164 c~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~ 243 (313)
T KOG1455|consen 164 CKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLN 243 (313)
T ss_pred cccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998888888889999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|.+++||++|.++.++.++.+++...+.++++++|||+-|.++..+++++.+.+...|.+||+++
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998899999999999999998789999999999999999876
No 2
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.6e-45 Score=293.21 Aligned_cols=316 Identities=42% Similarity=0.811 Sum_probs=235.0
Q ss_pred CCCCC--CCCCCCCCCCCCCccccccccCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHH
Q 020633 1 MPPET--QTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKIC 76 (323)
Q Consensus 1 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~ 76 (323)
|+-.+ ++++...||...+..+++...++..+..++...|| +|+|+.|.+.+. .++++|||+||++.+..|.|..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~ 80 (330)
T PLN02298 1 MEDMSDHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA 80 (330)
T ss_pred CCCcCCCCCCCCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH
Confidence 44444 67888999999999999999999999999999999 999999987642 467899999999876665778888
Q ss_pred HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCce
Q 020633 77 ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTW 156 (323)
Q Consensus 77 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v 156 (323)
..|+++||+|+++|+||||.|.+......+++.+++|+.++++.+......+..+++|+||||||.+++.++.++|++ |
T Consensus 81 ~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~-v 159 (330)
T PLN02298 81 IFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEG-F 159 (330)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccc-c
Confidence 889989999999999999999865544458899999999999999865322245799999999999999999999998 9
Q ss_pred eEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH
Q 020633 157 TGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236 (323)
Q Consensus 157 ~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++|+++|...........+........+..+.+..........................++..+...........+...
T Consensus 160 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T PLN02298 160 DGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV 239 (330)
T ss_pred eeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH
Confidence 99999998765443322222222222222222222211111111111112222222233334334433344444455544
Q ss_pred HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.....+.++++|+|+++|++|.++|++.++.+++.+..++++++++++++|.+++++|+...+++.+.|.+||.+++.
T Consensus 240 ~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 240 TDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44456778899999999999999999999999998888656789999999999999999988888999999999999875
Q ss_pred h
Q 020633 317 R 317 (323)
Q Consensus 317 ~ 317 (323)
.
T Consensus 320 ~ 320 (330)
T PLN02298 320 G 320 (330)
T ss_pred C
Confidence 4
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.5e-42 Score=278.75 Aligned_cols=289 Identities=36% Similarity=0.659 Sum_probs=207.4
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+...++.++.+.+| +|++..|+|.+..++++|||+||++++....|..++..|+++||+|+++|+||||.|++......
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 137 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIP 137 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcC
Confidence 45566677888899 99999999875467899999999998766457889999998899999999999999987655445
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+++++++|+.++++.+.........+++|+||||||.+++.++.++|++ ++++|+++|....................+
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~-v~glVLi~p~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNA-WDGAILVAPMCKIADDVVPPPLVLQILILL 216 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcch-hhheeEecccccccccccCchHHHHHHHHH
Confidence 8899999999999998764322245799999999999999999999999 999999998765433222222222222222
Q ss_pred hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
....+..............+.+.........+...+...........+..........+.++++|+|+|+|++|.++|++
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~ 296 (349)
T PLN02385 217 ANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPS 296 (349)
T ss_pred HHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChH
Confidence 22222111111111111112222221222222222222223333444444444456778899999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.++.+++.+..+++++++++++||.++.++|++..+++.+.|.+||+++..
T Consensus 297 ~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 297 VSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 999999988656789999999999999899988888899999999998864
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=4.8e-37 Score=241.22 Aligned_cols=267 Identities=22% Similarity=0.433 Sum_probs=187.0
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++...|| +|+|..|.|.. .+++.|+++||+++++. .|..+++.|+++||+|+++|+||||.|++......++..+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 4667799 99999998864 66788888899998877 899999999999999999999999999765433346777888
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh-hhcc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LADT 191 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (323)
|+.+.++.+....+ ..+++|+||||||.+|+.++.++|+. ++++|+++|....... .....+...... ..+.
T Consensus 82 d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~-i~~lil~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 82 DVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNL-FTAMILMSPLVNAEAV----PRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccc-cceEEEeccccccccc----cHHHHHHHHHHHHhCCC
Confidence 88888887765433 45899999999999999999999998 9999999986542211 001111111111 0110
Q ss_pred cccCCcccccccc-cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 192 WAAMPDNKMVGKA-IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
... ....... ..+.........++..........+..............+.++++|+|+|+|++|.++|++.++.+
T Consensus 155 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 155 KIV---GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred Ccc---CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHH
Confidence 000 0000011 111111111222222222222233333444334445677889999999999999999999999999
Q ss_pred HHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+. +++++++++++||.++.|.+ +..+++.+.+.+||+++
T Consensus 232 ~~~~~-~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 232 MQHAN-CNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHcc-CCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 88874 36899999999999997655 56888999999999986
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=8.4e-37 Score=237.47 Aligned_cols=282 Identities=26% Similarity=0.450 Sum_probs=223.7
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC-CCcccCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~~ 106 (323)
...+..+...|| .++|..|.+.. .++.+||++||++.+.. .|..++..|..+||.|+++|+||||.|. +......+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 445677888899 99999999876 44589999999999888 8999999999999999999999999998 67777778
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++.+|+..+++.+....+ ..+++++||||||.+++.++.+++.. ++++|+.+|....................+.
T Consensus 86 f~~~~~dl~~~~~~~~~~~~--~~p~~l~gHSmGg~Ia~~~~~~~~~~-i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDP--GLPVFLLGHSMGGLIALLYLARYPPR-IDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred HHHHHHHHHHHHHHHhccCC--CCCeEEEEeCcHHHHHHHHHHhCCcc-ccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 99999999999999987644 67999999999999999999999987 9999999999887641111112222333333
Q ss_pred hhhcccccCC---cccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH-HHHhcCCCCCcCEEEEeeCCCccc
Q 020633 187 GLADTWAAMP---DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.+.+.+.... .........+++.....+..++..........+......... ........+++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 3433333332 122234445677888889999987777777777777766655 334446778999999999999999
Q ss_pred C-chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 C-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ .+...++.+.+..+++++++++|+.|..+. +++...+++.+.+.+|+.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~-E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 243 DNVEGLARFFERAGSPDKELKVIPGAYHELLN-EPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cCcHHHHHHHHhcCCCCceEEecCCcchhhhc-CcchHHHHHHHHHHHHHHhhcc
Confidence 9 788888999888888999999999999994 4444458999999999998764
No 6
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=8.2e-36 Score=240.82 Aligned_cols=279 Identities=31% Similarity=0.552 Sum_probs=195.4
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+.......+...++ .+++..|.|..++++++||++||++++.. .|..+++.|+++||+|+++|+||||.|++......
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 185 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVP 185 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCc
Confidence 33345566777888 99999999965467889999999998766 78999999999999999999999999987655556
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
+++.+++|+.++++.+..+.+ ..+++++||||||.+++.++. +|+ . ++++|+.+|......... ......
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~-v~glVL~sP~l~~~~~~~---~~~~~~ 258 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDK-LEGIVLTSPALRVKPAHP---IVGAVA 258 (395)
T ss_pred CHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCcccc-cceEEEECcccccccchH---HHHHHH
Confidence 888999999999999987653 458999999999999998764 553 5 999999998765432211 111111
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.......+.+..............+.........++..+...........+..........+.++++|+|+++|++|.++
T Consensus 259 ~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vv 338 (395)
T PLN02652 259 PIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVT 338 (395)
T ss_pred HHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCC
Confidence 11122222221111110000111222222222223333222222333333333334456778899999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|++.++.+++.+.+.+++++++++++|..+++ ...+++.+.+.+||.+++.
T Consensus 339 p~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 339 DPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 99999999998765668999999999999853 2467799999999999875
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=9.2e-35 Score=232.62 Aligned_cols=276 Identities=16% Similarity=0.227 Sum_probs=187.2
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-----ccC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-----CYL 104 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~ 104 (323)
++.++...+| +++|..+++. .++++||++||++++.. .|..++..|+++||+|+++|+||||.|+... ...
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 5567777889 9999999875 34679999999998777 7888998898999999999999999997432 122
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+++++++|+.++++.+....+ ..+++++||||||.+++.++.++|+. ++++|+++|......... ......+...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~-~~~~~~~~~~ 183 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGV-FDAIALCAPMFGIVLPLP-SWMARRILNW 183 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCC-cceEEEECchhccCCCCC-cHHHHHHHHH
Confidence 4789999999999998755432 45899999999999999999999998 999999998765432221 1111111111
Q ss_pred hhhh---hcccccC----Cccccccc-ccCChH----HHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 185 LFGL---ADTWAAM----PDNKMVGK-AIKDPE----KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 185 ~~~~---~~~~~~~----~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.... ....... ........ ...... ....+..++..........+..........+...+.++++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 263 (330)
T PRK10749 184 AEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLL 263 (330)
T ss_pred HHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEE
Confidence 1100 0000000 00000000 011111 1122233332211122333444443333334566788999999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC-----CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS-----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|+|++|.+++++.++.+++.+. .+++++++++++||.++.|.+. ..+++.+.|.+||+++
T Consensus 264 ii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 264 LLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-MRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-HHHHHHHHHHHHHhhc
Confidence 99999999999999888888763 1456899999999999966553 4678999999999865
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.6e-34 Score=228.89 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=165.5
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc------ccCCChHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR------CYLGDMEKV 110 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~ 110 (323)
.+| +++|...|++ +++|||+||+++++. .|..+++.|+++ |+|+++|+||||.|+... ...++++++
T Consensus 15 ~~~~~i~y~~~G~~----~~~vlllHG~~~~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 15 WKGYNIRYQRAGTS----GPALVLVHGFGGNAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred EcCeEEEEEEcCCC----CCeEEEECCCCCChh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHH
Confidence 367 9998887643 479999999999888 899999999887 899999999999998543 124689999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC-chhh---HHHHHhhhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM-KPSK---LHLFMYGLLF 186 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~-~~~~---~~~~~~~~~~ 186 (323)
++|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++........ .... ....+...+.
T Consensus 89 a~~l~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
T PLN02824 89 GEQLNDFCSDVVGD------PAFVICNSVGGVVGLQAAVDAPEL-VRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLR 161 (294)
T ss_pred HHHHHHHHHHhcCC------CeEEEEeCHHHHHHHHHHHhChhh-eeEEEEECCCcccccccccchhhhHHHHHHHHHHh
Confidence 99999999998743 899999999999999999999999 99999999754221110 0000 0000111000
Q ss_pred hhh--ccc-ccCCc----cccccccc-----CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEE
Q 020633 187 GLA--DTW-AAMPD----NKMVGKAI-----KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFL 252 (323)
Q Consensus 187 ~~~--~~~-~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l 252 (323)
... ..+ ..... ...+...+ ........+... ............+.... ......+.++++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 238 (294)
T PLN02824 162 ETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRP---GLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVL 238 (294)
T ss_pred chhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhc---cCCchHHHHHHHHhccccccchHHHHhhcCCCeE
Confidence 000 000 00000 00000000 001111111100 00000011111111000 012345678899999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|++|.+++.+.++.+.+.. ++.++++++++||++++++|++ +.+.|.+|+++
T Consensus 239 vi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (294)
T PLN02824 239 IAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPEL----VNPLIESFVAR 293 (294)
T ss_pred EEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHH----HHHHHHHHHhc
Confidence 9999999999999888877765 6689999999999999777666 99999999975
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.5e-34 Score=225.97 Aligned_cols=253 Identities=16% Similarity=0.127 Sum_probs=159.7
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhcHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~ 119 (323)
+|+|...+.++ +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... ..++++++++|+.++++
T Consensus 35 ~i~y~~~G~~~---~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~ 110 (302)
T PRK00870 35 RMHYVDEGPAD---GPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFE 110 (302)
T ss_pred EEEEEecCCCC---CCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 57777766532 579999999998877 89999999987899999999999999975432 23588999999999999
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccC-Ccc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM-PDN 198 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 198 (323)
++..+ +++++||||||.+++.++.++|++ |+++|++++........... ........... .+..... ...
T Consensus 111 ~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~ 181 (302)
T PRK00870 111 QLDLT------DVTLVCQDWGGLIGLRLAAEHPDR-FARLVVANTGLPTGDGPMPD-AFWAWRAFSQY-SPVLPVGRLVN 181 (302)
T ss_pred HcCCC------CEEEEEEChHHHHHHHHHHhChhh-eeEEEEeCCCCCCccccchH-HHhhhhccccc-CchhhHHHHhh
Confidence 88643 899999999999999999999999 99999998743221110000 00000000000 0000000 000
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHH---------HHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR---------EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
........ ......+................. ............+.++++|+++|+|++|.++|.+. +.
T Consensus 182 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 182 GGTVRDLS-DAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred ccccccCC-HHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 00000000 001111100000000000000000 00001111234567899999999999999999766 77
Q ss_pred HHHHcCCCCcc---EEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKS---IKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 270 ~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+ ++.+ +.+++++||++++++|++ +.+.|.+|++++
T Consensus 260 ~~~~~--~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 260 LQKRI--PGAAGQPHPTIKGAGHFLQEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred HHhhc--ccccccceeeecCCCccchhhChHH----HHHHHHHHHhcC
Confidence 88877 4444 889999999999777765 899999999764
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5e-34 Score=223.81 Aligned_cols=257 Identities=17% Similarity=0.135 Sum_probs=167.8
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|...+.+ ..+++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|+.+.. .++++.+++|+.+
T Consensus 9 ~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~~ 83 (276)
T TIGR02240 9 LDGQSIRTAVRPGK--EGLTPLLIFNGIGANLE-LVFPFIEALDPD-LEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAAR 83 (276)
T ss_pred cCCcEEEEEEecCC--CCCCcEEEEeCCCcchH-HHHHHHHHhccC-ceEEEECCCCCCCCCCCCC-cCcHHHHHHHHHH
Confidence 466 9999776422 22579999999999888 899999999765 9999999999999975433 3589999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh-cccccC
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA-DTWAAM 195 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 195 (323)
+++++..+ +++|+||||||.+++.+|.++|++ |+++|++++................... ..... ......
T Consensus 84 ~i~~l~~~------~~~LvG~S~GG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 155 (276)
T TIGR02240 84 MLDYLDYG------QVNAIGVSWGGALAQQFAHDYPER-CKKLILAATAAGAVMVPGKPKVLMMMAS-PRRYIQPSHGIH 155 (276)
T ss_pred HHHHhCcC------ceEEEEECHHHHHHHHHHHHCHHH-hhheEEeccCCccccCCCchhHHHHhcC-chhhhccccccc
Confidence 99998644 799999999999999999999998 9999999987643211111100000000 00000 000000
Q ss_pred Cccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 196 PDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.......... .++.......... ................ ......+.++++|+|+|+|++|+++|++.++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~ 232 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASKV---RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWR 232 (276)
T ss_pred hhhhhccceeeccchhhhhhhhhc---ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 0000000000 0111110100000 0001111111111111 112345788999999999999999999999999998
Q ss_pred cCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+ ++.+++++++ ||+.++++|++ +.+.|.+|+++.-..
T Consensus 233 ~--~~~~~~~i~~-gH~~~~e~p~~----~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 233 I--PNAELHIIDD-GHLFLITRAEA----VAPIIMKFLAEERQR 269 (276)
T ss_pred C--CCCEEEEEcC-CCchhhccHHH----HHHHHHHHHHHhhhh
Confidence 8 7889999985 99999776655 999999999876543
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.7e-33 Score=221.94 Aligned_cols=259 Identities=13% Similarity=0.121 Sum_probs=165.3
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..++. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+.. .++++.+++|+.
T Consensus 13 ~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~ 84 (295)
T PRK03592 13 EVLGSRMAYIETGE-----GDPIVFLHGNPTSSY-LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLD 84 (295)
T ss_pred EECCEEEEEEEeCC-----CCEEEEECCCCCCHH-HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 3477 999998873 469999999998877 899999999888 6999999999999986543 358999999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh--cccc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA--DTWA 193 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 193 (323)
++++++..+ +++++||||||.+|+.++.++|++ |+++|++++....................+.... ....
T Consensus 85 ~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 85 AWFDALGLD------DVVLVGHDWGSALGFDWAARHPDR-VRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHhCCC------CeEEEEECHHHHHHHHHHHhChhh-eeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 999998754 899999999999999999999999 9999999984332111000000011111110000 0000
Q ss_pred c---CCccccccc----ccCChHHHHHHhcCCCCcCCCCchhH---------HHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 194 A---MPDNKMVGK----AIKDPEKLKVIASNPRRYTGKPRVGT---------MREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 194 ~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
. ......... .........................+ .........+....+.++++|+|+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 0 000000000 01111111111000000000000000 0011111122345577899999999999
Q ss_pred CCcccCchhHHHHH-HHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 258 ADGVTCPTSSKLLY-EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 258 ~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.++++....++. +.+ ++.++++++++||++++++|++ +.+.|.+|+++...
T Consensus 238 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fl~~~~~ 291 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWP--NQLEITVFGAGLHFAQEDSPEE----IGAAIAAWLRRLRL 291 (295)
T ss_pred CCcccCcHHHHHHHHHhh--hhcceeeccCcchhhhhcCHHH----HHHHHHHHHHHhcc
Confidence 99999665555554 445 6789999999999999776665 99999999987653
No 12
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=5.6e-33 Score=221.37 Aligned_cols=268 Identities=23% Similarity=0.349 Sum_probs=193.7
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH-------------------------HHHHHHHhhCCcEEEE
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-------------------------QKICISFATWGYAVFA 88 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-------------------------~~~~~~l~~~g~~v~~ 88 (323)
+.+.|| +|+++.|.+. +++.+|+++||++.+..+.| ..+++.|.++||.|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 456789 9999999885 56889999999998875221 4679999999999999
Q ss_pred ecCCCCcCCCCC---cccCCChHHHhhcHHHHHHHHHhc-------------------CCCCCCCeEEEEechhHHHHHH
Q 020633 89 ADLLGHGRSDGI---RCYLGDMEKVAASSLSFFKHVRDS-------------------EPYRDLPGFLFGESMGGAATML 146 (323)
Q Consensus 89 ~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~-------------------~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
+|+||||.|.+. .....+++++++|+..+++.+... ++ ...+++++||||||.+++.
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE-NRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc-CCCceeEeeccCccHHHHH
Confidence 999999999854 233347999999999999987652 11 1458999999999999999
Q ss_pred HhhhcCC-------CceeEEEEccCcccCCCCC-----chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 147 MYFQSEP-------NTWTGLIFSAPLFVIPENM-----KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 147 ~a~~~p~-------~~v~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
++..++. ..++++|+++|........ ........+...+..+.+...... ......++...+..
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVNDII 234 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhhhHH
Confidence 8876542 1389999988876542211 011112222222333333222111 01223445566667
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
..++..+.......+...+..........+..+ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVIT 314 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCc
Confidence 777777666667778788777766555556666 799999999999999999999998887666789999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHH
Q 020633 293 QGEPDENANLVLKDMREWID 312 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+. ..+++.+.|.+||+
T Consensus 315 ~E~---~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 315 IEP---GNEEVLKKIIEWIS 331 (332)
T ss_pred cCC---CHHHHHHHHHHHhh
Confidence 542 35779999999985
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.4e-33 Score=207.65 Aligned_cols=270 Identities=19% Similarity=0.179 Sum_probs=178.0
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLG 105 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~ 105 (323)
...-++.+.+.+| ++++..-++++ +|.|+++||++.... .|+.....|+.+||+|+++|+||+|.|+.+.. ..+
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~---gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGD---GPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCC---CCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee
Confidence 3445677888889 89988887765 899999999997766 89999999999999999999999999997765 677
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh---------
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK--------- 176 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~--------- 176 (323)
++..++.|+..+++++..+ +++++||+||+.+|+.+|..+|++ |+++|+++.....+.......
T Consensus 95 t~~~l~~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Per-v~~lv~~nv~~~~p~~~~~~~~~~~f~~~~ 167 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPER-VDGLVTLNVPFPNPKLKPLDSSKAIFGKSY 167 (322)
T ss_pred eHHHHHHHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhh-cceEEEecCCCCCcccchhhhhccccCccc
Confidence 9999999999999999954 899999999999999999999999 999999887655111110000
Q ss_pred ---------HHHH-Hhh-----hhhhh----hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH
Q 020633 177 ---------LHLF-MYG-----LLFGL----ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237 (323)
Q Consensus 177 ---------~~~~-~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (323)
.... +.. ....+ .+.....+...-...........+.+......-.-.......+.+.+..
T Consensus 168 y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w 247 (322)
T KOG4178|consen 168 YICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNW 247 (322)
T ss_pred eeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCc
Confidence 0000 000 00000 0000000000000000000111111111111111112223333333333
Q ss_pred HHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCCCCc-cEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADK-SIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 238 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.....+.++++|+++|+|+.|.+.+... ...+.+.+ ++. +.++++++||+...|+|++ +++.|.+|+++.
T Consensus 248 ~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v--p~l~~~vv~~~~gH~vqqe~p~~----v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV--PRLTERVVIEGIGHFVQQEKPQE----VNQAILGFINSF 320 (322)
T ss_pred hhccccccccccceEEEEecCcccccchhHHHHHHHhh--ccccceEEecCCcccccccCHHH----HHHHHHHHHHhh
Confidence 22244567889999999999999988763 33333444 333 7889999999999777766 999999999864
No 14
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.4e-33 Score=218.47 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=155.5
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
...|||+||++.+.. .|..+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+... .++++
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-----~~~~l 76 (255)
T PLN02965 3 EIHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-----HKVIL 76 (255)
T ss_pred ceEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-----CCEEE
Confidence 346999999998766 899999999878899999999999999755444468999999999999987531 37999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc-ccCCcccccccccCChHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW-AAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 213 (323)
+||||||.+++.++.++|++ |+++|++++............ ............... .....................
T Consensus 77 vGhSmGG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDK-ISMAIYVAAAMVKPGSIISPR-LKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EecCcchHHHHHHHHhCchh-eeEEEEEccccCCCCCCccHH-HHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 99999999999999999999 999999987532221110000 000000000000000 000000000000000000000
Q ss_pred HhcCCC--------CcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEec
Q 020633 214 IASNPR--------RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 214 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
...... ............. .......+.++++|+++|+|++|..+|++..+.+.+.+ +++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~ 228 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQD----LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLE 228 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhh----hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEec
Confidence 000000 0000000000000 01122345578999999999999999999999999999 788999999
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++||++++++|++ +.+.|.+|++..
T Consensus 229 ~~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 229 DSDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred CCCCchhhcCHHH----HHHHHHHHHHHh
Confidence 9999999877776 888888887653
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=3.6e-33 Score=228.05 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=165.2
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH-HHHHHh---hCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISFA---TWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+.+.+| +|+|...+|.++..+++|||+||++++.. .|.. +...|. +.+|+|+++|+||||.|+.+....++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 3444456 99999999876455789999999998877 7764 445554 3689999999999999986544456889
Q ss_pred HHhhcHH-HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh--
Q 020633 109 KVAASSL-SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-- 185 (323)
Q Consensus 109 ~~~~d~~-~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-- 185 (323)
++++++. .+++.+.. .+++++||||||.+++.+|.++|++ |+++|++++............ .......
T Consensus 258 ~~a~~l~~~ll~~lg~------~k~~LVGhSmGG~iAl~~A~~~Pe~-V~~LVLi~~~~~~~~~~~~~~--~~~~~~~~~ 328 (481)
T PLN03087 258 EHLEMIERSVLERYKV------KSFHIVAHSLGCILALALAVKHPGA-VKSLTLLAPPYYPVPKGVQAT--QYVMRKVAP 328 (481)
T ss_pred HHHHHHHHHHHHHcCC------CCEEEEEECHHHHHHHHHHHhChHh-ccEEEEECCCccccccchhHH--HHHHHHhcc
Confidence 9999984 78887753 3899999999999999999999999 999999997644322111000 0000000
Q ss_pred hhhhcccccCCc-ccccc---c-----ccCChHHHHH----HhcCC-CCc--------CCCCchhHHHHHHHH----H-H
Q 020633 186 FGLADTWAAMPD-NKMVG---K-----AIKDPEKLKV----IASNP-RRY--------TGKPRVGTMREIARV----C-Q 238 (323)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~---~-----~~~~~~~~~~----~~~~~-~~~--------~~~~~~~~~~~~~~~----~-~ 238 (323)
....+....... ..+.. . .......... ..... ... ...........+... . .
T Consensus 329 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 329 RRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDG 408 (481)
T ss_pred cccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhh
Confidence 000000000000 00000 0 0000000000 00000 000 000000011011100 0 1
Q ss_pred HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccccc-CCCchhHHHHHHHHHHHHHH
Q 020633 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ-GEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.....++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++||..++ ++|+. +++.|.+|...
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 112223468999999999999999999999999999 88999999999999885 66655 88888888753
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-32 Score=216.37 Aligned_cols=260 Identities=13% Similarity=0.175 Sum_probs=159.1
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
++.+..+++..+++++|...+. +++|||+||++.+.. .|..+.+.|.+. |+|+++|+||||.|+.+....+++
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G~-----~~~iv~lHG~~~~~~-~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEGT-----GPPILLCHGNPTWSF-LYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ccccceEEEcCCcEEEEEECCC-----CCEEEEECCCCccHH-HHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCH
Confidence 3445556665433999887763 478999999987666 788999999764 999999999999998654434578
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh--h-
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG--L- 184 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~--~- 184 (323)
+++++++.++++++.. .+++++||||||.+++.++..+|++ |+++|++++........... ....... .
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~ 156 (286)
T PRK03204 85 DEHARVIGEFVDHLGL------DRYLSMGQDWGGPISMAVAVERADR-VRGVVLGNTWFWPADTLAMK-AFSRVMSSPPV 156 (286)
T ss_pred HHHHHHHHHHHHHhCC------CCEEEEEECccHHHHHHHHHhChhh-eeEEEEECccccCCCchhHH-HHHHHhccccc
Confidence 9999999999988754 3799999999999999999999999 99999987654221110000 0000000 0
Q ss_pred hhhhhcccccCCcccccc----cccCChHHHHHHhcCCCCcCCCCchhHHH-H---HHHHHHHHHhcCCC--CCcCEEEE
Q 020633 185 LFGLADTWAAMPDNKMVG----KAIKDPEKLKVIASNPRRYTGKPRVGTMR-E---IARVCQYIQDNFSK--VTVPFLTV 254 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~--~~~P~l~i 254 (323)
...... . ......+.. ........ ..+................. . ...........+.. +++|+++|
T Consensus 157 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 157 QYAILR-R-NFFVERLIPAGTEHRPSSAVM-AHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred hhhhhh-h-hHHHHHhccccccCCCCHHHH-HHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 000000 0 000000000 00000111 11100000000000000000 0 00000111111111 28999999
Q ss_pred eeCCCcccCch-hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 255 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+|++|.++++. ..+.+.+.+ ++.++++++++||++++++|++ +.+.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 99999988665 467788888 7899999999999999777766 888888886
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=9.3e-33 Score=214.79 Aligned_cols=252 Identities=13% Similarity=0.117 Sum_probs=161.8
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
++|..+++.+...+|+|||+||++++.. .|..++..|.+ +|+|+++|+||||.|..... .+++++++|+.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDAL 78 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHc
Confidence 5666666665467899999999998877 89899999976 49999999999999986543 48999999999999998
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMV 201 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (323)
.. .+++|+||||||.+++.+|.++|++ |+++|++++............................ .......
T Consensus 79 ~~------~~~~lvGhS~Gg~va~~~a~~~~~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 149 (255)
T PRK10673 79 QI------EKATFIGHSMGGKAVMALTALAPDR-IDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR--QQAAAIM 149 (255)
T ss_pred CC------CceEEEEECHHHHHHHHHHHhCHhh-cceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH--HHHHHHH
Confidence 54 3799999999999999999999999 9999998753321110000000000000000000000 0000000
Q ss_pred ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccE
Q 020633 202 GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281 (323)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
..................................... ....++++++|+|+|+|++|..++.+..+.+.+.+ +++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~ 226 (255)
T PRK10673 150 RQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQARA 226 (255)
T ss_pred HHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh-CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcEE
Confidence 0011111111111111000000000000111111000 12346678999999999999999999999998888 78999
Q ss_pred EEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 282 KIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 282 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++++||+.++++|+. +.+.|.+||.+
T Consensus 227 ~~~~~~gH~~~~~~p~~----~~~~l~~fl~~ 254 (255)
T PRK10673 227 HVIAGAGHWVHAEKPDA----VLRAIRRYLND 254 (255)
T ss_pred EEeCCCCCeeeccCHHH----HHHHHHHHHhc
Confidence 99999999999766655 88999999875
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.7e-32 Score=221.63 Aligned_cols=264 Identities=19% Similarity=0.235 Sum_probs=164.8
Q ss_pred eeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
..++...+. +++|...|++. ...+++|||+||++++.. .|..++..|.+ +|+|+++|+||||.|+......+++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~ 140 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMET 140 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHH
Confidence 345555566 89999888641 113589999999998877 89999999976 699999999999999865444468899
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCC-chhhHHHHHh---hh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENM-KPSKLHLFMY---GL 184 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~---~~ 184 (323)
+++++.++++.+..+ +++|+||||||.+++.++.. +|++ |+++|++++........ ...+...... ..
T Consensus 141 ~a~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~P~r-V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
T PLN02679 141 WAELILDFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDL-VRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWL 213 (360)
T ss_pred HHHHHHHHHHHhcCC------CeEEEEECHHHHHHHHHHHhcChhh-cCEEEEECCccccccccccchHHHhhhcchHHH
Confidence 999999999988643 89999999999999988874 6888 99999999764322111 0011000000 00
Q ss_pred hhhh------hccc-ccCC----ccccc-----ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCC
Q 020633 185 LFGL------ADTW-AAMP----DNKMV-----GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSK 246 (323)
Q Consensus 185 ~~~~------~~~~-~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (323)
+... .... .... ..... ................ ................. .+....+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (360)
T PLN02679 214 IDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGP---ADDEGALDAFVSIVTGPPGPNPIKLIPR 290 (360)
T ss_pred HHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhh---ccCCChHHHHHHHHhcCCCCCHHHHhhh
Confidence 0000 0000 0000 00000 0000011111111100 00000111111111100 012345678
Q ss_pred CCcCEEEEeeCCCcccCchh-----HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTS-----SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++|+|+|+|++|.++|.+. ...+.+.+ +++++++++++||++++++|++ +++.|.+||++
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~----~~~~I~~FL~~ 356 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDL----VHEKLLPWLAQ 356 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHH----HHHHHHHHHHh
Confidence 89999999999999998863 22344455 7899999999999999666655 99999999975
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=4.3e-32 Score=211.59 Aligned_cols=248 Identities=13% Similarity=0.131 Sum_probs=161.7
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
++|..+++++ .++|+||++||++++.. .|..+++.|.+ +|+|+++|+||||.|.......++++++++++.++++++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGS-YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchh-HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4677787654 45789999999998877 88888888865 699999999999999865555568999999999999988
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc-cccc-----C
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD-TWAA-----M 195 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~ 195 (323)
.. .+++++||||||.+++.++.++|+. |+++|++++........... .......+..... .+.. .
T Consensus 78 ~~------~~~~l~G~S~Gg~~a~~~a~~~~~~-v~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T TIGR03611 78 NI------ERFHFVGHALGGLIGLQLALRYPER-LLSLVLINAWSRPDPHTRRC--FDVRIALLQHAGPEAYVHAQALFL 148 (257)
T ss_pred CC------CcEEEEEechhHHHHHHHHHHChHH-hHHheeecCCCCCChhHHHH--HHHHHHHHhccCcchhhhhhhhhh
Confidence 64 3799999999999999999999988 99999998765432111100 0000000000000 0000 0
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
....+..... .............+.. ........... .+....+.++++|+++++|++|.++|++.++.+.+.
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 223 (257)
T TIGR03611 149 YPADWISENA--ARLAADEAHALAHFPG---KANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAA 223 (257)
T ss_pred ccccHhhccc--hhhhhhhhhcccccCc---cHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHh
Confidence 0000000000 0000000000000000 00011110100 112345678899999999999999999999999988
Q ss_pred cCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ ++.+++.++++||...+++|++ +.+.|.+||+
T Consensus 224 ~--~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 256 (257)
T TIGR03611 224 L--PNAQLKLLPYGGHASNVTDPET----FNRALLDFLK 256 (257)
T ss_pred c--CCceEEEECCCCCCccccCHHH----HHHHHHHHhc
Confidence 8 7789999999999999765554 8888999985
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=2e-32 Score=212.71 Aligned_cols=242 Identities=16% Similarity=0.188 Sum_probs=149.3
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
|+|..+|.+ .|+|||+||++++.. .|..+.+.|.++ |+|+++|+||||.|+... ..+++++++++.+ +
T Consensus 4 ~~y~~~G~g----~~~ivllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~ 71 (256)
T PRK10349 4 IWWQTKGQG----NVHLVLLHGWGLNAE-VWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q 71 (256)
T ss_pred cchhhcCCC----CCeEEEECCCCCChh-HHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c
Confidence 555555532 357999999998887 899999999776 999999999999997543 2466666665543 2
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc-hhh---HHHHHhhhhh----hhhcccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-PSK---LHLFMYGLLF----GLADTWA 193 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~-~~~---~~~~~~~~~~----~~~~~~~ 193 (323)
. ..+++++||||||.+++.+|.++|++ |+++|++++......... ... ........+. .....+.
T Consensus 72 ~------~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
T PRK10349 72 A------PDKAIWLGWSLGGLVASQIALTHPER-VQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFL 144 (256)
T ss_pred C------CCCeEEEEECHHHHHHHHHHHhChHh-hheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHH
Confidence 2 34899999999999999999999999 999999987543221110 000 0001100000 0000000
Q ss_pred cCCcccccccccCChHHHHHHhcC-CCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASN-PRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
. .................... .................. ..+....+.++++|+|+|+|++|.++|.+.++.+.+
T Consensus 145 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 220 (256)
T PRK10349 145 A---LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (256)
T ss_pred H---HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH
Confidence 0 00000000000001111000 000000000000111111 112445678899999999999999999998888888
Q ss_pred HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+ +++++++++++||++++++|+. +.+.+.+|-.
T Consensus 221 ~i--~~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~~ 254 (256)
T PRK10349 221 LW--PHSESYIFAKAAHAPFISHPAE----FCHLLVALKQ 254 (256)
T ss_pred hC--CCCeEEEeCCCCCCccccCHHH----HHHHHHHHhc
Confidence 88 8899999999999999777766 7777777743
No 21
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1e-31 Score=211.86 Aligned_cols=256 Identities=15% Similarity=0.169 Sum_probs=163.7
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...+| +++|...++.+ +++|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+......++++.+++|
T Consensus 10 ~~~~~~~~~~~~~~g~~~---~~~vv~~hG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 10 RVTVGPFHWHVQDMGPTA---GPLLLLLHGTGASTH-SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred eeeECCEEEEEEecCCCC---CCeEEEEcCCCCCHH-HHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 334477 99998887643 589999999998877 89999999976 5999999999999998655444689999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch---hhHHHHHh--hhhhhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP---SKLHLFMY--GLLFGL 188 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~---~~~~~~~~--~~~~~~ 188 (323)
+.++++.+..+ +++|+||||||.+++.++.++|++ ++++|++++.......... ........ ......
T Consensus 85 l~~~i~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T TIGR03056 85 LSALCAAEGLS------PDGVIGHSAGAAIALRLALDGPVT-PRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPM 157 (278)
T ss_pred HHHHHHHcCCC------CceEEEECccHHHHHHHHHhCCcc-cceEEEEcCcccccccccccccchhhHhhhhcccchHH
Confidence 99999887533 789999999999999999999998 9999998875432211100 00000000 000000
Q ss_pred hcccccCC--cccccc---cccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH--HHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 189 ADTWAAMP--DNKMVG---KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 189 ~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
........ ...... ...... ....+..... .............. .......++++++|+++|+|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 158 MSRGAADQQRVERLIRDTGSLLDKA-GMTYYGRLIR---SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHhhcccCcchhHHhhccccccccc-hhhHHHHhhc---CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 00000000 000000 000000 0000000000 00000000000000 0112345678899999999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.+.++.+.+.+ +++++++++++||++++++|++ +.+.|.+|++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADG----VVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHH----HHHHHHHHhC
Confidence 9999999998888 7889999999999999665544 8899998873
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=5.4e-31 Score=211.51 Aligned_cols=264 Identities=14% Similarity=0.116 Sum_probs=167.1
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC--- 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 102 (323)
+++.........+| +++|...++.+ +++|||+||++++.. .|+.++..|++ +|+|+++|+||||.|+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~ 175 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSNN---NPPVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYG 175 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCccccc
Confidence 34434444556778 99998887643 689999999998877 89999999976 69999999999999986543
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
..++++++++++.++++++..+ +++|+|||+||.+++.++.++|++ |+++|++++.........+. ....+.
T Consensus 176 ~~ys~~~~a~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~P~~-v~~lILi~~~~~~~~~~~p~-~l~~~~ 247 (383)
T PLN03084 176 FNYTLDEYVSSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAHPDK-IKKLILLNPPLTKEHAKLPS-TLSEFS 247 (383)
T ss_pred ccCCHHHHHHHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhChHh-hcEEEEECCCCccccccchH-HHHHHH
Confidence 2458999999999999999754 799999999999999999999999 99999999864322110111 011110
Q ss_pred hhh-hhhhcccccCCccccc---ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--------HHHHhc--CCCCC
Q 020633 183 GLL-FGLADTWAAMPDNKMV---GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--------QYIQDN--FSKVT 248 (323)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~ 248 (323)
..+ ..+............. ............+.... ........ ....+.... ...... ..+++
T Consensus 248 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~-~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~ 325 (383)
T PLN03084 248 NFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPY-LTSGSSGF-ALNAISRSMKKELKKYIEEMRSILTDKNWK 325 (383)
T ss_pred HHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccc-cCCcchHH-HHHHHHHHhhcccchhhHHHHhhhccccCC
Confidence 000 0000000000000000 00000111111111100 00000000 001111110 011111 14679
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|+++|+|+.|.+++.+.++.+.+. .+.++++++++||+++.++|++ +++.|.+||.
T Consensus 326 vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~Fl~ 382 (383)
T PLN03084 326 TPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEE----LGGIISGILS 382 (383)
T ss_pred CCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHH----HHHHHHHHhh
Confidence 9999999999999999888877775 3679999999999999666555 8899999985
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.98 E-value=3.4e-31 Score=209.09 Aligned_cols=248 Identities=17% Similarity=0.170 Sum_probs=151.0
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
+++|...+. +++|||+||++++.. .|.. .+..|.+.||+|+++|+||||.|+...........+++|+.++
T Consensus 21 ~~~y~~~g~-----~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 21 RIHYNEAGN-----GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred eEEEEecCC-----CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 577766542 468999999987765 4543 3456667789999999999999975432111122457888899
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc--hhhHHHHHhhhhhhh-hccccc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGL-ADTWAA 194 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~ 194 (323)
++.+..+ +++++||||||.+++.++.++|++ ++++|++++......... ............... ......
T Consensus 95 l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (282)
T TIGR03343 95 MDALDIE------KAHLVGNSMGGATALNFALEYPDR-IGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQ 167 (282)
T ss_pred HHHcCCC------CeeEEEECchHHHHHHHHHhChHh-hceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHH
Confidence 8888644 899999999999999999999999 999999987532111000 000001110000000 000000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHH-------HHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR-------VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
......................... ... .....+.. ...+....++++++|+|+++|++|.+++++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 168 MLNVFLFDQSLITEELLQGRWENIQ---RQP--EHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHhhCccCcccCcHHHHHhHHHHhh---cCH--HHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 0000000000000000000000000 000 00000000 00112345678999999999999999999999
Q ss_pred HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+.+.+ +++++++++++||++++++|+. +.+.|.+||+
T Consensus 243 ~~~~~~~--~~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNM--PDAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred HHHHHhC--CCCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 9999988 8899999999999999777665 8899999985
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=1.2e-30 Score=211.47 Aligned_cols=259 Identities=12% Similarity=0.108 Sum_probs=156.0
Q ss_pred CCC-cEEEEEecCCCC----CcceEEEEecCCCCCccccHH--HHHHHH-------hhCCcEEEEecCCCCcCCCCCccc
Q 020633 38 PNG-KLFTQSFLPLDQ----KVKATVYMTHGYGSDTGWMFQ--KICISF-------ATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.+| +++|..+|.+.. +.+|+|||+||++++.. .|. .+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 567 999998875320 11579999999998765 443 455444 135699999999999999754321
Q ss_pred ------CCChHHHhhcHHHHH-HHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 104 ------LGDMEKVAASSLSFF-KHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 ------~~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.++++++++++.+++ +++..+ +++ |+||||||.+|+.+|.++|++ |+++|++++....... ..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~------~~~~lvG~SmGG~vAl~~A~~~P~~-V~~LVLi~s~~~~~~~--~~ 196 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK------HLRLILGTSMGGMHAWMWGEKYPDF-MDALMPMASQPTEMSG--RN 196 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC------ceeEEEEECHHHHHHHHHHHhCchh-hheeeeeccCcccccH--HH
Confidence 357888888887754 666543 664 899999999999999999999 9999999875321110 11
Q ss_pred hHHHH-Hhhhhhhhhcccc---cCCcc-c---cc---------------ccccCChHHHHHHhcCCCCcCCCCchhHHHH
Q 020633 176 KLHLF-MYGLLFGLADTWA---AMPDN-K---MV---------------GKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232 (323)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~---~~~~~-~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
+.... ......... .+. ..... . .. ...................... ........
T Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 274 (360)
T PRK06489 197 WMWRRMLIESIRNDP-AWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT-ADANDFLY 274 (360)
T ss_pred HHHHHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh-cCHHHHHH
Confidence 10000 000000000 000 00000 0 00 0000000000000000000000 00011111
Q ss_pred HHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhH--HHHHHHcCCCCccEEEecCC----CcccccCCCchhHHHHH
Q 020633 233 IARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSS--KLLYEKASSADKSIKIYDGM----YHSLIQGEPDENANLVL 304 (323)
Q Consensus 233 ~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~ 304 (323)
..... .+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ ++.++++++++ ||..+ ++|+. +.
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~----~~ 347 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSAKF----WK 347 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCHHH----HH
Confidence 11111 113456788999999999999999998865 7788888 88999999996 99987 65554 99
Q ss_pred HHHHHHHHHHH
Q 020633 305 KDMREWIDERV 315 (323)
Q Consensus 305 ~~i~~fl~~~~ 315 (323)
+.|.+||++..
T Consensus 348 ~~i~~FL~~~~ 358 (360)
T PRK06489 348 AYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHhcc
Confidence 99999998754
No 25
>PLN02578 hydrolase
Probab=99.98 E-value=2.1e-30 Score=209.43 Aligned_cols=254 Identities=19% Similarity=0.192 Sum_probs=162.4
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...+. +++|||+||++++.. .|..+.+.|++. |+|+++|+||||.|+.... .++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g~-----g~~vvliHG~~~~~~-~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE-----GLPIVLIHGFGASAF-HWRYNIPELAKK-YKVYALDLLGFGWSDKALI-EYDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHHhcC-CEEEEECCCCCCCCCCccc-ccCHHHHHH
Confidence 3334467 898887652 468999999998876 888889999764 9999999999999986543 358888999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch---------hhH----HH
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP---------SKL----HL 179 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~---------~~~----~~ 179 (323)
++.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++.......... ... ..
T Consensus 141 ~l~~~i~~~~~~------~~~lvG~S~Gg~ia~~~A~~~p~~-v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (354)
T PLN02578 141 QVADFVKEVVKE------PAVLVGNSLGGFTALSTAVGYPEL-VAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVK 213 (354)
T ss_pred HHHHHHHHhccC------CeEEEEECHHHHHHHHHHHhChHh-cceEEEECCCccccccccccccccccccchhhHHHhH
Confidence 999999988643 799999999999999999999999 9999998875432211100 000 00
Q ss_pred HHhhhhhhhhccc---ccCCcc---c-----ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH------HHHHh
Q 020633 180 FMYGLLFGLADTW---AAMPDN---K-----MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC------QYIQD 242 (323)
Q Consensus 180 ~~~~~~~~~~~~~---~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 242 (323)
............+ ...... . +......+............ ............... ....+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T PLN02578 214 PLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAA---DPNAGEVYYRLMSRFLFNQSRYTLDS 290 (354)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhccc---CCchHHHHHHHHHHHhcCCCCCCHHH
Confidence 0000000000000 000000 0 00000000111111100000 000011111111110 01234
Q ss_pred cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+.++++|+++|+|++|.+++.+.++.+.+.+ ++.+++++ ++||+++.++|++ +.+.|.+|++
T Consensus 291 ~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 291 LLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred HhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 56789999999999999999999999999888 78899988 5899999776666 8899999985
No 26
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=9.7e-31 Score=197.10 Aligned_cols=272 Identities=20% Similarity=0.203 Sum_probs=165.0
Q ss_pred ccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc
Q 020633 23 YTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 23 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 101 (323)
+....+++...++...++ .+......+.+ ..++++|+|||+|.... .|-.-.+.|++ .+.|+++|++|+|.|+.+.
T Consensus 58 l~~~~v~~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~ 134 (365)
T KOG4409|consen 58 LSSVPVPYSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPK 134 (365)
T ss_pred hhhcCCCcceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCC
Confidence 334567777777777777 66666665554 67899999999998888 67677778887 5999999999999998654
Q ss_pred ccCC---ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCC-Cc----
Q 020633 102 CYLG---DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN-MK---- 173 (323)
Q Consensus 102 ~~~~---~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~-~~---- 173 (323)
-... ....+++-++++....+. .+.+|+|||+||++|..||.+||++ |+.+||++|+...... ..
T Consensus 135 F~~d~~~~e~~fvesiE~WR~~~~L------~KmilvGHSfGGYLaa~YAlKyPer-V~kLiLvsP~Gf~~~~~~~~~~~ 207 (365)
T KOG4409|consen 135 FSIDPTTAEKEFVESIEQWRKKMGL------EKMILVGHSFGGYLAAKYALKYPER-VEKLILVSPWGFPEKPDSEPEFT 207 (365)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCC------cceeEeeccchHHHHHHHHHhChHh-hceEEEecccccccCCCcchhhc
Confidence 3221 223444555555444443 3899999999999999999999999 9999999998765433 11
Q ss_pred --hhhHHHHHhhhhhhhhcccccCCcc----cccc-----------cccCChH-HHHHHhcCCCCcCCCCchhHHHHHH-
Q 020633 174 --PSKLHLFMYGLLFGLADTWAAMPDN----KMVG-----------KAIKDPE-KLKVIASNPRRYTGKPRVGTMREIA- 234 (323)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (323)
+......+......+.+........ .+.. ....+.. ..-.+..+ ...++.......+
T Consensus 208 ~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n----~~~psgE~~fk~l~ 283 (365)
T KOG4409|consen 208 KPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN----AQNPSGETAFKNLF 283 (365)
T ss_pred CCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc----CCCCcHHHHHHHHH
Confidence 1111111111111111100000000 0000 0001111 11111111 1111111111111
Q ss_pred ---H-HHHHHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHH
Q 020633 235 ---R-VCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 235 ---~-~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
. ....+.+.+..+ +||+++|+|++|. ++.....++...+....++.++++++||.+++++|+. +++.+.
T Consensus 284 ~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~----Fn~~v~ 358 (365)
T KOG4409|consen 284 EPGGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF----FNQIVL 358 (365)
T ss_pred hccchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHH----HHHHHH
Confidence 0 111233444444 4999999999985 4555566666654445689999999999999888877 777777
Q ss_pred HHHHH
Q 020633 309 EWIDE 313 (323)
Q Consensus 309 ~fl~~ 313 (323)
.++++
T Consensus 359 ~~~~~ 363 (365)
T KOG4409|consen 359 EECDK 363 (365)
T ss_pred HHHhc
Confidence 77754
No 27
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=192.38 Aligned_cols=231 Identities=14% Similarity=0.109 Sum_probs=159.1
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~ 104 (323)
...++.+.+.+| +|+++...|.+ ..+.++||++||++.+.. .+..+++.|+++||.|+.+|+||+ |.|++.....
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 446678889999 99999999963 356789999999998766 699999999999999999999988 9997654322
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++.....|+.+++++++... ..++.|+||||||.+|+..|... . ++++|+.+|+......... .
T Consensus 87 -t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~-v~~lI~~sp~~~l~d~l~~---------~ 150 (307)
T PRK13604 87 -TMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--D-LSFLITAVGVVNLRDTLER---------A 150 (307)
T ss_pred -cccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--C-CCEEEEcCCcccHHHHHHH---------h
Confidence 44445799999999998753 45899999999999997766632 3 8999999998764321110 0
Q ss_pred hhhhhcccccCCccc---ccccccC-ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc
Q 020633 185 LFGLADTWAAMPDNK---MVGKAIK-DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
+......+....... +.+.... ..........+... .....+.++++++|+|+|||++|.
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~----------------~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDT----------------LDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccc----------------cccHHHHHhhcCCCEEEEEcCCCC
Confidence 000000000000000 0000000 00111111111100 011234456778999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
+||.+.++.+++.+.+.++++++++|++|.+.
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 99999999999988656799999999999998
No 28
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=6.8e-30 Score=179.56 Aligned_cols=228 Identities=15% Similarity=0.188 Sum_probs=169.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+..||+|||+.|+.. ..+.++++|.++||.|.++.+||||.....-- ..+.++|.+|+.+..++|.... ...|.+
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~g---y~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEAG---YDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHcC---CCeEEE
Confidence 479999999999988 89999999999999999999999998863222 2378999999999999999442 458999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||.+++.+|..+| ++++|.++++......... ...+...... ...... ...+.....+
T Consensus 90 ~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~i---ie~~l~y~~~----~kk~e~-------k~~e~~~~e~ 152 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRII---IEGLLEYFRN----AKKYEG-------KDQEQIDKEM 152 (243)
T ss_pred EeecchhHHHHHHHhhCC---ccceeeecCCcccccchhh---hHHHHHHHHH----hhhccC-------CCHHHHHHHH
Confidence 999999999999999988 7899998887664432221 1111111110 000000 0011111111
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
... . .........+....+.....+..|..|++++.|.+|+.+|.+.+..+++.+.+.+.++.+++++||.+..
T Consensus 153 ~~~----~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~- 226 (243)
T COG1647 153 KSY----K-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL- 226 (243)
T ss_pred HHh----h-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec-
Confidence 111 0 0122334455555666778888999999999999999999999999999998888999999999999984
Q ss_pred CCchhHHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWID 312 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~ 312 (323)
++.++++.+.+..||+
T Consensus 227 --D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 227 --DKERDQVEEDVITFLE 242 (243)
T ss_pred --chhHHHHHHHHHHHhh
Confidence 6678899999999996
No 29
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=2.3e-30 Score=208.77 Aligned_cols=261 Identities=9% Similarity=0.005 Sum_probs=153.8
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHH---HHHhhCCcEEEEecCCCCcCCCCCcc--cCCChHH---
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC---ISFATWGYAVFAADLLGHGRSDGIRC--YLGDMEK--- 109 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~--- 109 (323)
+| +|+|..+|+.+.+..|+||++||++++.. .|..+. ..|...+|+||++|+||||.|+.+.. ..++++.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 56 89999998743233567777787776655 454333 35655679999999999999975432 1223332
Q ss_pred --HhhcHHH----HHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 110 --VAASSLS----FFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 110 --~~~d~~~----~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
+++|+.+ +++++..+ + ++|+||||||++|+.+|.++|++ |+++|++++....... .........
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~------~~~~lvG~S~GG~va~~~a~~~P~~-V~~Lvli~~~~~~~~~--~~~~~~~~~ 173 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIE------RLALVVGWSMGAQQTYHWAVRYPDM-VERAAPIAGTAKTTPH--NFVFLEGLK 173 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCC------ceEEEEEeCHHHHHHHHHHHHCHHH-HhhheeeecCCCCCHH--HHHHHHHHH
Confidence 4566655 55666643 7 47999999999999999999999 9999999865432110 000000000
Q ss_pred hhhhhhhcccc----cC-----------------Ccccccc----cccC----ChHHHHHHhcCCCCcCCCCchhHHHHH
Q 020633 183 GLLFGLADTWA----AM-----------------PDNKMVG----KAIK----DPEKLKVIASNPRRYTGKPRVGTMREI 233 (323)
Q Consensus 183 ~~~~~~~~~~~----~~-----------------~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
..+... +.+. .. ....+.. .... ..........................+
T Consensus 174 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 174 AALTAD-PAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred HHHHhC-CCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHh
Confidence 000000 0000 00 0000000 0000 000001111000000000000000000
Q ss_pred HH-----H---HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC-CCcccccCCCchhHHHHH
Q 020633 234 AR-----V---CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDENANLVL 304 (323)
Q Consensus 234 ~~-----~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~ 304 (323)
.. . ..+....++++++|+|+|+|++|..+|++.++.+.+.+ ++++++++++ +||..++++++. +.
T Consensus 253 ~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~ 326 (339)
T PRK07581 253 QRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DI 326 (339)
T ss_pred hhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HH
Confidence 00 0 01234567789999999999999999999999998888 7899999998 999999887776 77
Q ss_pred HHHHHHHHHHHh
Q 020633 305 KDMREWIDERVE 316 (323)
Q Consensus 305 ~~i~~fl~~~~~ 316 (323)
..|.+||++.+.
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 888888877653
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=5.5e-30 Score=203.09 Aligned_cols=251 Identities=18% Similarity=0.168 Sum_probs=155.2
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc--CCChHHHhhc
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY--LGDMEKVAAS 113 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d 113 (323)
..+| ++.|...++. +.+++|||+||++++....|..+...|.+.||+|+++|+||+|.|...... ..+++.+++|
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 8 TVDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred cCCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 3445 7877776653 336899999998766553566777777666899999999999999754322 2588999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH-HHhhhhhhhhccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL-FMYGLLFGLADTW 192 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (323)
+.++++++..+ +++++||||||.+++.++..+|++ ++++|++++............... .+...........
T Consensus 86 ~~~~~~~~~~~------~~~liG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (288)
T TIGR01250 86 LEEVREKLGLD------KFYLLGHSWGGMLAQEYALKYGQH-LKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRC 158 (288)
T ss_pred HHHHHHHcCCC------cEEEEEeehHHHHHHHHHHhCccc-cceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHH
Confidence 99999887643 799999999999999999999998 999999887543221100000000 0000000000000
Q ss_pred ccCCcccccccccCChHHHHHH----------------------hcCCCC----cCCCCchhHHHHHHHHHHHHHhcCCC
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVI----------------------ASNPRR----YTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
.. . ............ ...... ............ . ...+....+.+
T Consensus 159 ~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~ 229 (288)
T TIGR01250 159 EA--S-----GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGN-L-KDWDITDKLSE 229 (288)
T ss_pred Hh--c-----cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccccc-c-cccCHHHHhhc
Confidence 00 0 000000000000 000000 000000000000 0 00012345678
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++|+++++|++|.+ +++..+.+.+.+ ++.++++++++||+.++++|++ +.+.|.+||+
T Consensus 230 i~~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 288 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEV----YFKLLSDFIR 288 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHH----HHHHHHHHhC
Confidence 899999999999985 567788888877 6789999999999999776665 8888888873
No 31
>PLN02511 hydrolase
Probab=99.97 E-value=1.9e-29 Score=205.02 Aligned_cols=283 Identities=11% Similarity=0.056 Sum_probs=171.0
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCC---CCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~---~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
..+.+++..+.+.|| .+.+..+.+. ....+|+||++||+++++.. ++..++..+.++||+|+++|+||||.|...
T Consensus 67 ~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 67 PAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred CCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 446677888999999 8877655421 12457899999999876542 335577777788999999999999999753
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCCCCC---ch--
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENM---KP-- 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~~~~---~~-- 174 (323)
.... ....+++|+.++++++..+++ ..+++++||||||.+++.++.+++++ .|.++++++++.+..... ..
T Consensus 147 ~~~~-~~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~ 223 (388)
T PLN02511 147 TPQF-YSASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGF 223 (388)
T ss_pred CcCE-EcCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccH
Confidence 3222 235678899999999998764 56899999999999999999998864 267777776654321000 00
Q ss_pred -hhHHHHHhhhhhhhhcc----cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 175 -SKLHLFMYGLLFGLADT----WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 175 -~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
......+...+...... +...................++......... ......+++.. ......+.+|++
T Consensus 224 ~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~---gf~~~~~yy~~-~s~~~~L~~I~v 299 (388)
T PLN02511 224 NNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF---GFKSVDAYYSN-SSSSDSIKHVRV 299 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC---CCCCHHHHHHH-cCchhhhccCCC
Confidence 00000011011111100 0000000000000000001111100000000 11111111111 113456788999
Q ss_pred CEEEEeeCCCcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchh--HHHHHHHHHHHHHHHHhh
Q 020633 250 PFLTVHGTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDEN--ANLVLKDMREWIDERVER 317 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~--~~~~~~~i~~fl~~~~~~ 317 (323)
|+|+|+|++|+++|.+.. ....+.. +++++++++++||..+++.|+.. ...+.+.+.+||+.....
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999999998765 3444555 78999999999999999887642 123577888888877643
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=5.5e-30 Score=198.23 Aligned_cols=231 Identities=16% Similarity=0.234 Sum_probs=144.6
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+.+.|.+ +|+|+++|+||+|.|..... .+++++++++.+.+ ..++++
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~----------~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA----------PDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC----------CCCeEE
Confidence 479999999998877 89999999975 59999999999999875432 36666666655432 238999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--chhh---HHHHHhhhhh----hhhcccccCCccccccccc
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KPSK---LHLFMYGLLF----GLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 205 (323)
+||||||.+++.++.++|++ ++++|++++........ .... ....+...+. .....+... .......
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 145 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDR-VRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLAL---QTLGTPT 145 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHh-hheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHH---HHhcCCc
Confidence 99999999999999999998 99999988765432111 0000 0000000000 000000000 0000000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEE
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
............... ............... .+....+.++++|+++++|++|.++|.+..+.+.+.+ +++++++
T Consensus 146 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 221 (245)
T TIGR01738 146 ARQDARALKQTLLAR--PTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYI 221 (245)
T ss_pred cchHHHHHHHHhhcc--CCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEE
Confidence 011111111100000 000011111111111 1133456789999999999999999999988888888 7899999
Q ss_pred ecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 284 YDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++++||++++++|++ +.+.|.+|+
T Consensus 222 ~~~~gH~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHH----HHHHHHhhC
Confidence 999999999877766 888888874
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=2.5e-30 Score=200.89 Aligned_cols=247 Identities=17% Similarity=0.182 Sum_probs=157.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+++|..+++. +.+|+||++||++.+.. .|..+++.|. .||+|+++|+||||.|..... ..+++++++|+.++++.
T Consensus 1 ~~~~~~~g~~--~~~~~li~~hg~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 1 RLHYRLDGAA--DGAPVLVFINSLGTDLR-MWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDH 75 (251)
T ss_pred CceEEeecCC--CCCCeEEEEcCcccchh-hHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 3667777654 24689999999998877 8888998886 579999999999999975433 35899999999999998
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh-hhhhhhccc-ccCCcc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG-LLFGLADTW-AAMPDN 198 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 198 (323)
+.. .+++++|||+||.+++.+|.++|++ ++++|++++................... ......... ......
T Consensus 76 ~~~------~~v~liG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR02427 76 LGI------ERAVFCGLSLGGLIAQGLAARRPDR-VRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTP 148 (251)
T ss_pred hCC------CceEEEEeCchHHHHHHHHHHCHHH-hHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccc
Confidence 863 3799999999999999999999998 9999998875432211000000000000 000000000 000000
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS 276 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 276 (323)
.... ........+...... . ............ ......+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 149 ~~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-- 219 (251)
T TIGR02427 149 GFRE---AHPARLDLYRNMLVR---Q-PPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-- 219 (251)
T ss_pred cccc---CChHHHHHHHHHHHh---c-CHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--
Confidence 0000 000000000000000 0 000000000000 1123456788999999999999999999888888887
Q ss_pred CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 277 ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 277 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++.++++++++||..++++|+. +.+.|.+|++
T Consensus 220 ~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl~ 251 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCVEQPEA----FNAALRDFLR 251 (251)
T ss_pred CCceEEEECCCCCcccccChHH----HHHHHHHHhC
Confidence 6789999999999999776655 7888888863
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=2.1e-30 Score=199.97 Aligned_cols=230 Identities=15% Similarity=0.170 Sum_probs=142.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+.+.| + +|+|+++|+||||.|..... .+++++++|+.++++.+.. +++++
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~------~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNI------LPYWL 70 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCC------CCeEE
Confidence 578999999998887 999999988 4 59999999999999986543 3889999999999998753 38999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc----c-ccCCcccccccccCChH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----W-AAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 209 (323)
+||||||.+|+.+|.++|+..|++++++++.......................+... . ........... .....
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNAEQ 149 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCccH
Confidence 999999999999999986533999999887643322110000000000000000000 0 00000000000 00111
Q ss_pred HHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe
Q 020633 210 KLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
........... ........... ..+..+.+.++++|+++|+|++|..+. .+.+. .+++++++
T Consensus 150 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i 216 (242)
T PRK11126 150 RQQLVAKRSNN-----NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVI 216 (242)
T ss_pred HHHHHHhcccC-----CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEe
Confidence 11111100000 00001111110 012345677899999999999998542 23332 36899999
Q ss_pred cCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++||++++++|++ +.+.|.+|+++
T Consensus 217 ~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhChHH----HHHHHHHHHhh
Confidence 99999999877766 88888888864
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=6.8e-30 Score=198.60 Aligned_cols=252 Identities=14% Similarity=0.134 Sum_probs=154.0
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|.. |. +.+|+|||+||++.+.. .|..+...|.++||+|+++|+||||.|........+++++++++.+
T Consensus 4 ~~~~~~~~~~--~~--~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--PN--RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--cc--CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 356 776655 32 44789999999998776 8999999998889999999999999886443333588999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc----c
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----W 192 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 192 (323)
+++.+.. ..+++|+||||||.+++.++..+|++ |+++|++++............ .......+...... +
T Consensus 79 ~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~-v~~lv~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (273)
T PLN02211 79 FLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKK-ICLAVYVAATMLKLGFQTDED-MKDGVPDLSEFGDVYELGF 151 (273)
T ss_pred HHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhh-eeEEEEeccccCCCCCCHHHH-Hhccccchhhhccceeeee
Confidence 9887642 23899999999999999999999998 999999987532111111000 00000000000000 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-----HHH--HHHHhcCCCC-CcCEEEEeeCCCcccCc
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-----RVC--QYIQDNFSKV-TVPFLTVHGTADGVTCP 264 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~-~~P~l~i~g~~D~~~~~ 264 (323)
.....................+..+... .......... ... ........++ ++|+++|.|++|..+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 152 GLGPDQPPTSAIIKKEFRRKILYQMSPQ----EDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred ccCCCCCCceeeeCHHHHHHHHhcCCCH----HHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 0000000000000001011111100000 0000000000 000 0011123344 78999999999999999
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+..+.+.+.+ +..+++.++ +||.+++++|++ +.+.|.+...
T Consensus 228 ~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a~ 268 (273)
T PLN02211 228 EQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFL----LFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHhC--CccEEEEEC-CCCCccccCHHH----HHHHHHHHHH
Confidence 9999999988 567889997 899999988887 6666655543
No 36
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=4.5e-30 Score=206.90 Aligned_cols=257 Identities=12% Similarity=0.056 Sum_probs=154.7
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-----------cHHHHHH---HHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-----------MFQKICI---SFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
.+| +|+|..+|+.+ +++||+||+.++... .|..+.. .|...+|+|+++|+||||.|...
T Consensus 43 ~~~~~l~y~~~G~~~----~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-- 116 (343)
T PRK08775 43 LEDLRLRYELIGPAG----APVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-- 116 (343)
T ss_pred CCCceEEEEEeccCC----CCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--
Confidence 366 89999888632 346666666555442 4777775 56444699999999999988532
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
.++.+++++|+.++++++..+ ..++|+||||||++|+.+|.++|++ |+++|++++....... ...+ ....
T Consensus 117 -~~~~~~~a~dl~~ll~~l~l~-----~~~~lvG~SmGG~vA~~~A~~~P~~-V~~LvLi~s~~~~~~~-~~~~--~~~~ 186 (343)
T PRK08775 117 -PIDTADQADAIALLLDALGIA-----RLHAFVGYSYGALVGLQFASRHPAR-VRTLVVVSGAHRAHPY-AAAW--RALQ 186 (343)
T ss_pred -CCCHHHHHHHHHHHHHHcCCC-----cceEEEEECHHHHHHHHHHHHChHh-hheEEEECccccCCHH-HHHH--HHHH
Confidence 247889999999999998754 1357999999999999999999999 9999999986542210 0000 0000
Q ss_pred hhhhhhhcccccC-Cc----ccc-cccccCChHHHHHHhcCCCCcC-------------------CCCchhHHHHHHHHH
Q 020633 183 GLLFGLADTWAAM-PD----NKM-VGKAIKDPEKLKVIASNPRRYT-------------------GKPRVGTMREIARVC 237 (323)
Q Consensus 183 ~~~~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 237 (323)
............. .. ... .............+........ ..........+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 0000000000000 00 000 0000000000000000000000 000000001111111
Q ss_pred HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC-CCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 238 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
......+.++++|+|+|+|++|.++|++..+.+.+.+. ++.+++++++ +||..++++|++ +++.|.+||++.-
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~~~~l~~FL~~~~ 340 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----IDAILTTALRSTG 340 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----HHHHHHHHHHhcc
Confidence 10122467899999999999999999988888888773 4789999985 999999887776 9999999997653
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=2.5e-30 Score=197.85 Aligned_cols=217 Identities=24% Similarity=0.336 Sum_probs=147.1
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|..... ...+++++++|+.++++.+..+ +++++|
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK------KVILVG 72 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS------SEEEEE
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc------cccccc
Confidence 799999999887 8999999995 789999999999999986543 2358899999999999998853 899999
Q ss_pred echhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--c-hhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHH
Q 020633 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--K-PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
||+||.+++.++.++|++ |+++|+++|........ . .......+............ ................
T Consensus 73 ~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 147 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDR-VKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA----SRFFYRWFDGDEPEDL 147 (228)
T ss_dssp ETHHHHHHHHHHHHSGGG-EEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTHHHHHHH
T ss_pred cccccccccccccccccc-cccceeecccccccccccccccchhhhhhhhcccccccccc----cccccccccccccccc
Confidence 999999999999999998 99999999876532111 0 00001111100000000000 0000000011111111
Q ss_pred HhcCCCCcCCCCchhHHHHHHH---HHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 214 IASNPRRYTGKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
... .......... ........++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||+
T Consensus 148 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 216 (228)
T PF12697_consen 148 IRS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHF 216 (228)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSST
T ss_pred ccc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCc
Confidence 111 1111111111 223345667788999999999999999988889998888 78999999999999
Q ss_pred cccCCCch
Q 020633 291 LIQGEPDE 298 (323)
Q Consensus 291 ~~~~~~~~ 298 (323)
+++++|++
T Consensus 217 ~~~~~p~~ 224 (228)
T PF12697_consen 217 LFLEQPDE 224 (228)
T ss_dssp HHHHSHHH
T ss_pred cHHHCHHH
Confidence 99777665
No 38
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=5e-29 Score=202.76 Aligned_cols=261 Identities=12% Similarity=0.117 Sum_probs=159.4
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccc------------cHHHHHH---HHhhCCcEEEEecCCCC-cCCCCCc
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW------------MFQKICI---SFATWGYAVFAADLLGH-GRSDGIR 101 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~~~ 101 (323)
+| +|+|..+|..+++.+|+|||+||++++... .|..++. .|...+|+|+++|++|+ |.|+++.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 45 789999986432346899999999988651 2555542 34345799999999983 4443211
Q ss_pred ----c---------cCCChHHHhhcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 102 ----C---------YLGDMEKVAASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 102 ----~---------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
. ..++++++++++.++++++..+ + ++++||||||.+++.+|.++|++ |+++|++++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 183 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT------RLAAVVGGSMGGMQALEWAIDYPDR-VRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC------CceEEEEECHHHHHHHHHHHhChHh-hhEEEEECCCcc
Confidence 0 1358999999999999998764 6 58999999999999999999999 999999987654
Q ss_pred CCCCCchhhHHHHHhhhhhhhhccccc--------C-------------------------Ccccccccc----cCC-hH
Q 020633 168 IPENMKPSKLHLFMYGLLFGLADTWAA--------M-------------------------PDNKMVGKA----IKD-PE 209 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------------------~~~~~~~~~----~~~-~~ 209 (323)
...... .+ .......+.. ...+.. . ......... ... ..
T Consensus 184 ~~~~~~-~~-~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~ 260 (379)
T PRK00175 184 LSAQNI-AF-NEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQ 260 (379)
T ss_pred cCHHHH-HH-HHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccch
Confidence 322100 00 0000000000 000000 0 000000000 000 00
Q ss_pred HHHHHh----cCCCCcCCCCchhHHHHHHHHHH-------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC
Q 020633 210 KLKVIA----SNPRRYTGKPRVGTMREIARVCQ-------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 210 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
...... ........ .............+ ++...+.+|++|+|+|+|++|.++|++.++.+.+.+ ++
T Consensus 261 ~~~~l~~~~~~~~~~~d~-~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i--~~ 337 (379)
T PRK00175 261 VESYLRYQGDKFVERFDA-NSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL--LA 337 (379)
T ss_pred HHHHHHHHHHHHhhccCc-hHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH--Hh
Confidence 000000 00000000 00000000111110 134567889999999999999999999999999998 44
Q ss_pred c----cEEEec-CCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 279 K----SIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 279 ~----~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
. ++++++ ++||..++++|++ +++.|.+||++...
T Consensus 338 a~~~~~l~~i~~~~GH~~~le~p~~----~~~~L~~FL~~~~~ 376 (379)
T PRK00175 338 AGADVSYAEIDSPYGHDAFLLDDPR----YGRLVRAFLERAAR 376 (379)
T ss_pred cCCCeEEEEeCCCCCchhHhcCHHH----HHHHHHHHHHhhhh
Confidence 4 677775 8999999877765 99999999988654
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=1.2e-29 Score=205.07 Aligned_cols=259 Identities=15% Similarity=0.179 Sum_probs=157.6
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccc----------cHHHHH---HHHhhCCcEEEEecCCC--CcCCCCC-
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW----------MFQKIC---ISFATWGYAVFAADLLG--HGRSDGI- 100 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~~- 100 (323)
.+| +|+|..+|+.+...+++||++||++++... .|..++ ..|..++|+|+++|+|| ||.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 466 899999997432346799999999986521 366664 25556779999999999 5655421
Q ss_pred ---c-------ccCCChHHHhhcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 101 ---R-------CYLGDMEKVAASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 101 ---~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
. ...++++++++|+.+++++++.+ + ++++||||||.+++.++.++|++ |+++|++++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE------QIAAVVGGSMGGMQALEWAIDYPER-VRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEccCCcCC
Confidence 1 11357899999999999998654 6 99999999999999999999999 99999999865433
Q ss_pred CCCchhhHHHHHhhhhhhhhcccccC-------Cc------cccccc-ccCChHHHHHHhcCCCCc--------------
Q 020633 170 ENMKPSKLHLFMYGLLFGLADTWAAM-------PD------NKMVGK-AIKDPEKLKVIASNPRRY-------------- 221 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~-~~~~~~~~~~~~~~~~~~-------------- 221 (323)
..... +. ......+... ..+... +. ...... ..........+.......
T Consensus 166 ~~~~~-~~-~~~~~~~~~~-~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 166 AWCIA-FN-EVQRQAILAD-PNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred HHHHH-HH-HHHHHHHHhC-CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 21100 10 0000000000 000000 00 000000 000000000010000000
Q ss_pred ----------CCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEE
Q 020633 222 ----------TGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282 (323)
Q Consensus 222 ----------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
................. ++.+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++.+++
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCc
Confidence 00000000000011111 124567889999999999999999999999999998 556554
Q ss_pred -----EecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 283 -----IYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 283 -----~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++||..++++|++ +.+.|.+||+
T Consensus 321 v~~~~i~~~~GH~~~le~p~~----~~~~l~~FL~ 351 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETDQ----VEELIRGFLR 351 (351)
T ss_pred eEEEEeCCCCCcchhhcCHHH----HHHHHHHHhC
Confidence 5678999999877655 8888998874
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=4.2e-29 Score=196.30 Aligned_cols=270 Identities=20% Similarity=0.201 Sum_probs=167.3
Q ss_pred ceeEEEcCCC--cEEEEEecCCC------CCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcC-CCCC
Q 020633 31 GKKYFETPNG--KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGR-SDGI 100 (323)
Q Consensus 31 ~~~~~~~~~g--~l~~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~-s~~~ 100 (323)
....+....| .+....++... ...+++||++|||+++.. .|+.....|.++ |+.|+++|++|+|. |..+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCCCCC
Confidence 4455556666 56665555541 136899999999999666 999999988776 59999999999994 4445
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE---EccCcccCCCCCchhh-
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI---FSAPLFVIPENMKPSK- 176 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v---l~~~~~~~~~~~~~~~- 176 (323)
....++..++++-+..+......+ +++++|||+||.+|+.+|+.+|+. |++++ ++++.....+......
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~~~~------~~~lvghS~Gg~va~~~Aa~~P~~-V~~lv~~~~~~~~~~~~~~~~~~~~ 177 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEVFVE------PVSLVGHSLGGIVALKAAAYYPET-VDSLVLLDLLGPPVYSTPKGIKGLR 177 (326)
T ss_pred CCCceehhHHHHHHHHHHHhhcCc------ceEEEEeCcHHHHHHHHHHhCccc-ccceeeecccccccccCCcchhHHH
Confidence 555567777777777777766643 799999999999999999999999 99999 5555544332221110
Q ss_pred -HHHHHhhhhhhhhcccccCCcc--------cccccccC----ChHHHHHHhcCC-CCcCCCCchhHHHHHHHHHHHHHh
Q 020633 177 -LHLFMYGLLFGLADTWAAMPDN--------KMVGKAIK----DPEKLKVIASNP-RRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
.............+.....+.. ........ ............ ........................
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T KOG1454|consen 178 RLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLS 257 (326)
T ss_pred HhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHH
Confidence 1111111111111111100000 00000000 000000000000 000000000000000000011234
Q ss_pred cCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++++. +|+|+++|++|.++|.+.+..+.+.+ +++++++++++||.+++++|++ ++..|..|+.+.
T Consensus 258 ~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 258 LIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEE----VAALLRSFIARL 324 (326)
T ss_pred hhccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHH----HHHHHHHHHHHh
Confidence 456665 99999999999999999999999988 8999999999999999766666 999999999765
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=1.4e-28 Score=195.42 Aligned_cols=260 Identities=17% Similarity=0.158 Sum_probs=154.7
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~ 109 (323)
..++...+| +|+|..+++++ +++|||+||++++.. .+ .+...+...+|+|+++|+||||.|..... ...+.++
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 456777788 99998887543 568999999876654 32 34445555679999999999999985432 2346788
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----HHH-hhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH----LFM-YGL 184 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~----~~~-~~~ 184 (323)
+++|+..+++++..+ +++++||||||.+++.++.++|++ |+++|++++....+.. ..+.. ..+ ...
T Consensus 81 ~~~dl~~l~~~l~~~------~~~lvG~S~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~ 151 (306)
T TIGR01249 81 LVADIEKLREKLGIK------NWLVFGGSWGSTLALAYAQTHPEV-VTGLVLRGIFLLREKE--WSWFYEGGASMIYPDA 151 (306)
T ss_pred HHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHHChHh-hhhheeeccccCCHHH--HHHHHhcchhhhCHHH
Confidence 899999988887643 799999999999999999999998 9999999876542210 00000 000 000
Q ss_pred hhhhhcccccC-----CcccccccccCC-hHH----HHHH---hc-CCCCcCC-------CCchh-HHHHHH---HH---
Q 020633 185 LFGLADTWAAM-----PDNKMVGKAIKD-PEK----LKVI---AS-NPRRYTG-------KPRVG-TMREIA---RV--- 236 (323)
Q Consensus 185 ~~~~~~~~~~~-----~~~~~~~~~~~~-~~~----~~~~---~~-~~~~~~~-------~~~~~-~~~~~~---~~--- 236 (323)
+..+....... ....+....... ... .... .. ....... .+... ....+. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
T TIGR01249 152 WQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKG 231 (306)
T ss_pred HHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhc
Confidence 00010000000 000000000000 000 0000 00 0000000 00000 001100 00
Q ss_pred ----HHHHHhcCCCC-CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHH
Q 020633 237 ----CQYIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 237 ----~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.++ ++|+|+|+|++|.++|.+.++.+++.+ ++.++++++++||..+ .++..+.+.+.+.+|
T Consensus 232 ~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~---~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 232 FLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF---DPNNLAALVHALETY 305 (306)
T ss_pred hhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC---ChHHHHHHHHHHHHh
Confidence 01123455667 699999999999999999999999998 7889999999999987 234333344444433
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=4.9e-29 Score=193.53 Aligned_cols=233 Identities=17% Similarity=0.222 Sum_probs=145.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhc-HHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAAS-SLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~~ 132 (323)
+|+||++||++++.. .|..+.+.|+ +||+|+++|+||+|.|..... ...++++.+++ +..+++.+. ..++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------IEPF 72 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------CCeE
Confidence 378999999998877 8999999998 789999999999999975432 33477777777 666666653 3489
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH---Hhhhh-----hhhhcccccCCccccccc-
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF---MYGLL-----FGLADTWAAMPDNKMVGK- 203 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~- 203 (323)
+++|||+||.+++.++.++|+. |++++++++................ ....+ ..+...+... .....
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 148 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPER-VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQ---PLFASQ 148 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchh-eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcC---ceeeec
Confidence 9999999999999999999998 9999999876543321111000000 00000 0000000000 00000
Q ss_pred -ccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 204 -AIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
................ ... ......... .......+.++++|+++++|++|..++ +..+.+.+.. +
T Consensus 149 ~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~ 220 (251)
T TIGR03695 149 KNLPPEQRQALRAKRLA-NNP----EGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--P 220 (251)
T ss_pred ccCChHHhHHHHHhccc-ccc----hHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--C
Confidence 0001111111111000 000 011111110 011234467789999999999998764 4556666666 7
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+.++++++++||++++++|+. +.+.|.+|+
T Consensus 221 ~~~~~~~~~~gH~~~~e~~~~----~~~~i~~~l 250 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENPEA----FAKILLAFL 250 (251)
T ss_pred CCcEEEEcCCCCCcCccChHH----HHHHHHHHh
Confidence 889999999999999877755 888888887
No 43
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=6.5e-28 Score=196.75 Aligned_cols=247 Identities=15% Similarity=0.161 Sum_probs=161.9
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
.+...+++.++..+| +|.++.+.|...++.|+||++||+++.....|..+++.|+++||.|+++|+||+|.|......
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~- 242 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT- 242 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-
Confidence 344567888999999 999999988654667888888887765433678888999999999999999999999653211
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+.... ...+++++.....++..+++++|||+||++++.+|..+|++ ++++|+++|+...... .......+...
T Consensus 243 ~d~~~~---~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r-i~a~V~~~~~~~~~~~--~~~~~~~~p~~ 316 (414)
T PRK05077 243 QDSSLL---HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR-LKAVACLGPVVHTLLT--DPKRQQQVPEM 316 (414)
T ss_pred ccHHHH---HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC-ceEEEEECCccchhhc--chhhhhhchHH
Confidence 122222 24566777665444567999999999999999999998988 9999999887531100 00000000000
Q ss_pred hhh-hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcC-CCCCcCEEEEeeCCCccc
Q 020633 185 LFG-LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF-SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~ 262 (323)
... +....... ..........+.. + .......+ .++++|+|+|+|++|.++
T Consensus 317 ~~~~la~~lg~~--------~~~~~~l~~~l~~----~---------------sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 317 YLDVLASRLGMH--------DASDEALRVELNR----Y---------------SLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHHHHhCCC--------CCChHHHHHHhhh----c---------------cchhhhhhccCCCCcEEEEecCCCCCC
Confidence 000 00000000 0000000000000 0 00001111 568999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+.++.+.+.. ++.++++++++ .+++ ..+++++.+.+||++++
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e----~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYR----NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccC----CHHHHHHHHHHHHHHHh
Confidence 999999888777 78999999986 2322 34569999999998875
No 44
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=3.8e-27 Score=192.35 Aligned_cols=246 Identities=17% Similarity=0.130 Sum_probs=140.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH----HHhhcHHHHHHHHHhcCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME----KVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~----~~~~d~~~~l~~l~~~~~~~ 128 (323)
..+|+|||+||++++.. .|...+..|.++ |+|+++|+||||.|+.......+.+ .+++++.++++.+.
T Consensus 103 ~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~------ 174 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG-FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN------ 174 (402)
T ss_pred CCCCEEEEECCCCcchh-HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC------
Confidence 45789999999998776 677777888765 9999999999999975432211222 23455555555443
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH--------HHhhhh--hhhhcccccC---
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--------FMYGLL--FGLADTWAAM--- 195 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~--- 195 (323)
..+++++||||||.+++.+|.++|++ |+++|+++|............... .+...+ ..+.+.....
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 253 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEH-VQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLG 253 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchh-hcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhcc
Confidence 34899999999999999999999998 999999988654322111100000 000000 0000000000
Q ss_pred C---------ccccccc-----ccCChH---HHHHHhcCCCCcCCCCchhHHHHHH-----HHHHHHHhcCCCCCcCEEE
Q 020633 196 P---------DNKMVGK-----AIKDPE---KLKVIASNPRRYTGKPRVGTMREIA-----RVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 196 ~---------~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~ 253 (323)
+ ....... ...... ..+.+... .............. ....+....+.++++|+++
T Consensus 254 p~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~li 330 (402)
T PLN02894 254 PWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHT---LAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTF 330 (402)
T ss_pred chhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHh---hcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEE
Confidence 0 0000000 000000 00000000 00000000000000 0012234567889999999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+|++|.+.+ .....+.+... ..+++++++++||+.++++|+. +++.+.+|++..+.
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~----f~~~l~~~~~~~~~ 387 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSG----FHSAVLYACRKYLS 387 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHH----HHHHHHHHHHHhcc
Confidence 9999998765 55556666552 3588999999999999888877 56666666655543
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.96 E-value=1.3e-27 Score=190.85 Aligned_cols=281 Identities=11% Similarity=0.093 Sum_probs=165.4
Q ss_pred cCcccceeEEEcCCC-cEEEEEec-CCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFL-PLDQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~-~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..+......+.+.|| .+.+.... +....++|+||++||++++... ....+++.|.++||+|+++|+||||.+.....
T Consensus 27 ~~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 27 VLFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 345666777899999 76654432 2222457899999999876432 34668899999999999999999997754322
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCCCCCch---h---
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENMKP---S--- 175 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~~~~~~---~--- 175 (323)
..+. ....+|+..+++++....+ ..+++++||||||.+++.++.++++. .++++|+++++......... .
T Consensus 107 ~~~~-~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~ 183 (324)
T PRK10985 107 RIYH-SGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSR 183 (324)
T ss_pred ceEC-CCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHH
Confidence 1112 2246888888888887654 56899999999999988888876543 37888888886543211100 0
Q ss_pred hHHHHHhhhhhhhh-cccccCCcccccc--cccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 176 KLHLFMYGLLFGLA-DTWAAMPDNKMVG--KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.....+...+.... ............. .........++......... ......+.+.... ....++++++|++
T Consensus 184 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~~~-~~~~l~~i~~P~l 259 (324)
T PRK10985 184 VYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQCS-ALPLLNQIRKPTL 259 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHHCC-hHHHHhCCCCCEE
Confidence 00000000000000 0000000000000 00000000111000011111 1112222222222 3456788999999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCc-hhHHHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDERV 315 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~~ 315 (323)
+|+|++|++++.+....+.+.. ++.++++++++||+.+++..- ......-+.+.+|++...
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EEecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 9999999999988777776555 678999999999999976431 112346677888887654
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=1.5e-28 Score=201.54 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=153.3
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++ +++|..+++++ +++|||+||++++.. .|..+...|.+. |+|+++|+||||.|..... ..+++++++++..+
T Consensus 117 ~~~~i~~~~~g~~~---~~~vl~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~ 190 (371)
T PRK14875 117 GGRTVRYLRLGEGD---GTPVVLIHGFGGDLN-NWLFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAF 190 (371)
T ss_pred cCcEEEEecccCCC---CCeEEEECCCCCccc-hHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHH
Confidence 45 78887776543 689999999998887 888888888765 9999999999999964433 34889999999998
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh--hhhhhcccccC
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL--LFGLADTWAAM 195 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 195 (323)
++.+.. .+++++|||+||.+++.+|..+|++ ++++|++++........ ..+ ...+... ...+.......
T Consensus 191 ~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~~~~-v~~lv~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 191 LDALGI------ERAHLVGHSMGGAVALRLAARAPQR-VASLTLIAPAGLGPEIN-GDY-IDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHhcCC------ccEEEEeechHHHHHHHHHHhCchh-eeEEEEECcCCcCcccc-hhH-HHHhhcccchhHHHHHHHHH
Confidence 887653 3799999999999999999999988 99999998764322111 100 0000000 00000000000
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-------HHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
... ................... ........+... ..+....+.++++|+|+++|++|.++|.+..+
T Consensus 262 ~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~ 334 (371)
T PRK14875 262 FAD---PALVTRQMVEDLLKYKRLD----GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ 334 (371)
T ss_pred hcC---hhhCCHHHHHHHHHHhccc----cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh
Confidence 000 0000000000111000000 000000000000 01133456678999999999999999977654
Q ss_pred HHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+. .+.++.+++++||+.++++|+. +.+.|.+||++
T Consensus 335 ~l~-----~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 370 (371)
T PRK14875 335 GLP-----DGVAVHVLPGAGHMPQMEAAAD----VNRLLAEFLGK 370 (371)
T ss_pred hcc-----CCCeEEEeCCCCCChhhhCHHH----HHHHHHHHhcc
Confidence 432 4678999999999999776654 88888899864
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.96 E-value=2.6e-26 Score=178.83 Aligned_cols=255 Identities=15% Similarity=0.189 Sum_probs=156.1
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCC----ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD----TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+.+...+.+|....+.|.+ ..++.||++||++.. .. .+..+++.|+++||.|+++|+||||.|.+.. .++
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~ 78 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGF 78 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCH
Confidence 34454443389888888875 345678878876532 22 4667889999999999999999999997542 367
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+.+.+|+.++++++....+ ...+++++|||+||.+++.++.. +.. |+++|+++|+......................
T Consensus 79 ~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~-v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T TIGR03100 79 EGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLR-VAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS 155 (274)
T ss_pred HHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCC-ccEEEEECCccCCcccchHHHHHHHHHHHHhC
Confidence 8888999999999976531 13479999999999999998765 445 99999999875432211111100000000000
Q ss_pred hhcccccCCcccccccccCCh-HHHHHHh----cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 188 LADTWAAMPDNKMVGKAIKDP-EKLKVIA----SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
. ..+.. ......... ....+.. ..+.. ...... ....++...+..+++|+++++|+.|...
T Consensus 156 ~-~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~l~~~~~P~ll~~g~~D~~~ 221 (274)
T TIGR03100 156 A-DFWRK-----LLSGEVNLGSSLRGLGDALLKARQKG--DEVAHG------GLAERMKAGLERFQGPVLFILSGNDLTA 221 (274)
T ss_pred h-HHHHH-----hcCCCccHHHHHHHHHHHHHhhhhcC--CCcccc------hHHHHHHHHHHhcCCcEEEEEcCcchhH
Confidence 0 00000 000000000 0011110 00000 000000 0222244556667999999999999876
Q ss_pred CchhH------HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 263 CPTSS------KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ +.. ....+.+..++++++.+++++|++. .+...+++.+.|.+||+
T Consensus 222 ~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~---~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 222 Q-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFS---DRVWREWVAARTTEWLR 273 (274)
T ss_pred H-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccc---cHHHHHHHHHHHHHHHh
Confidence 3 221 3344445457899999999999886 25556889999999995
No 48
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=3.6e-27 Score=220.10 Aligned_cols=244 Identities=16% Similarity=0.160 Sum_probs=154.4
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-------ccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-------CYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
.+++|||+||++++.. .|..+...|.+. |+|+++|+||||.|.... ...++++.+++++.++++++..
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~--- 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP--- 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC---
Confidence 4689999999999888 899999999765 999999999999997432 1234788999999999988764
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH---HHhhhh-----hhhhcccccCCcc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL---FMYGLL-----FGLADTWAAMPDN 198 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~ 198 (323)
++++|+||||||.+++.++.++|++ |+++|++++............... .....+ ..+...+.. .
T Consensus 1445 ---~~v~LvGhSmGG~iAl~~A~~~P~~-V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~ 1517 (1655)
T PLN02980 1445 ---GKVTLVGYSMGARIALYMALRFSDK-IEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYS---G 1517 (1655)
T ss_pred ---CCEEEEEECHHHHHHHHHHHhChHh-hCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhcc---H
Confidence 3899999999999999999999999 999999886543321110000000 000000 000000000 0
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.........+........... . ............ ..+..+.+.++++|+|+|+|++|..++ +.++++.+.
T Consensus 1518 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~ 1592 (1655)
T PLN02980 1518 ELWKSLRNHPHFNKIVASRLL---H-KDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYRE 1592 (1655)
T ss_pred HHhhhhccCHHHHHHHHHHHh---c-CCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHH
Confidence 000000000111111110000 0 000011111111 112345678899999999999999875 566677776
Q ss_pred cCCC----------CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 274 ASSA----------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 274 ~~~~----------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+... .+++++++++||.+++++|+. +.+.|.+||++....+
T Consensus 1593 i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~~ 1643 (1655)
T PLN02980 1593 IGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLP----VIRALRKFLTRLHNSS 1643 (1655)
T ss_pred ccccccccccccccceEEEEECCCCCchHHHCHHH----HHHHHHHHHHhccccC
Confidence 6321 258999999999999877765 9999999999865443
No 49
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.95 E-value=3.1e-27 Score=165.25 Aligned_cols=238 Identities=17% Similarity=0.203 Sum_probs=180.9
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHH-hhCCcEEEEecCCCCcCCC
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISF-ATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l-~~~g~~v~~~d~~G~G~s~ 98 (323)
..++..+++++++.+.+.|. +|+.+....+ .++|+++++|+..++.+ ..-.+++-+ ..-+..|+.+++||+|.|.
T Consensus 45 ptP~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 45 PTPKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred CCccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 34567799999999999999 9998887744 57999999999999877 444555544 3347999999999999998
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
+.+ +-+.+.-|..++++++..+...+..++++.|.|+||.+|..+|++..++ +.++|+-+++.+.+....+...
T Consensus 122 Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-i~~~ivENTF~SIp~~~i~~v~- 195 (300)
T KOG4391|consen 122 GSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-ISAIIVENTFLSIPHMAIPLVF- 195 (300)
T ss_pred CCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-eeeeeeechhccchhhhhheec-
Confidence 875 4466778899999999998877888999999999999999999999998 9999999988776432211000
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
....+..+.+ ..+..-.....+.+.+.|.|++.|.+
T Consensus 196 ----p~~~k~i~~l----------------------------------------c~kn~~~S~~ki~~~~~P~LFiSGlk 231 (300)
T KOG4391|consen 196 ----PFPMKYIPLL----------------------------------------CYKNKWLSYRKIGQCRMPFLFISGLK 231 (300)
T ss_pred ----cchhhHHHHH----------------------------------------HHHhhhcchhhhccccCceEEeecCc
Confidence 0000000000 00000001223445689999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+||+...+.+++..++...++..+|++.|...+.. +-.++.|.+||.+...
T Consensus 232 DelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-----dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 232 DELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-----DGYFQAIEDFLAEVVK 284 (300)
T ss_pred cccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-----ccHHHHHHHHHHHhcc
Confidence 9999999999999999888899999999999876432 3388999999988754
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=1.4e-26 Score=174.51 Aligned_cols=259 Identities=16% Similarity=0.158 Sum_probs=171.9
Q ss_pred cEEEEEe-cCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSF-LPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~-~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
++.|..+ ...+....|+++++||+.++.. .|..+...|+.. |-.|+++|.|.||.|+..... +...+++|+..+|
T Consensus 37 ~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 37 RLAYDSVYSSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLFI 113 (315)
T ss_pred ccceeeeecccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHHH
Confidence 4666655 4444467899999999999987 999999999876 789999999999999876554 7899999999999
Q ss_pred HHHHhcCCCCCCCeEEEEechhH-HHHHHHhhhcCCCceeEEEEccCccc-CCCCCchhhHHHHHhhhhhhhhcc----c
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFV-IPENMKPSKLHLFMYGLLFGLADT----W 192 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~vl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~ 192 (323)
+..+.... ..+++++|||||| .+++..+...|+. +..+|++.-... ....... ...+...+...... .
T Consensus 114 ~~v~~~~~--~~~~~l~GHsmGG~~~~m~~t~~~p~~-~~rliv~D~sP~~~~~~~~e---~~e~i~~m~~~d~~~~~~~ 187 (315)
T KOG2382|consen 114 DGVGGSTR--LDPVVLLGHSMGGVKVAMAETLKKPDL-IERLIVEDISPGGVGRSYGE---YRELIKAMIQLDLSIGVSR 187 (315)
T ss_pred HHcccccc--cCCceecccCcchHHHHHHHHHhcCcc-cceeEEEecCCccCCcccch---HHHHHHHHHhccccccccc
Confidence 99974321 4489999999999 7778888889998 777777543322 1111111 11111111111111 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCC------CCchhHHHHHHHHH--HHHHhcC--CCCCcCEEEEeeCCCccc
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTG------KPRVGTMREIARVC--QYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
........+.....+....+++..+...-.. ...+....++.... ..+...+ .....||+++.|.++..+
T Consensus 188 ~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv 267 (315)
T KOG2382|consen 188 GRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFV 267 (315)
T ss_pred cHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCc
Confidence 0000011111223344444455444432111 12222233333221 1112222 556889999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+...++.+.+ ++++++.++++||+.+.|+|++ +.+.|.+|+.++
T Consensus 268 ~~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 268 PDEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLEEP 313 (315)
T ss_pred ChhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhccc
Confidence 999989998888 8899999999999999888877 888888888764
No 51
>PRK10566 esterase; Provisional
Probab=99.94 E-value=4.5e-25 Score=170.75 Aligned_cols=211 Identities=16% Similarity=0.142 Sum_probs=135.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-c-CC----ChHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-Y-LG----DMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~-~~----~~~~~~~d~~~~l~~l~~~~~ 126 (323)
++.|+||++||++++.. .|..++..|+++||.|+++|+||||.+..... . .. ......+|+.++++++.....
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45789999999988776 78889999999999999999999997642111 1 00 112335677778888776544
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEE-EEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGL-IFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++..+++++|||+||.+++.++.++|+ +.+. +++++... ....... .+.. . ....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~~~---~~~~---~----~~~~- 159 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGSGYF-----------TSLARTL---FPPL---I----PETA- 159 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCcHHH-----------HHHHHHh---cccc---c----cccc-
Confidence 456799999999999999999998887 4444 33332110 0000000 0000 0 0000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCC-CcCEEEEeeCCCcccCchhHHHHHHHcCCC----C
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSA----D 278 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~ 278 (323)
.. ............ +....+.++ ++|+|+++|++|.++|++.++.+.+.+... +
T Consensus 160 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~ 220 (249)
T PRK10566 160 AQ-------------------QAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKN 220 (249)
T ss_pred cc-------------------HHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcc
Confidence 00 000000000000 012234455 689999999999999999999998887432 3
Q ss_pred ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++++++++||.+. . ...+.+.+||++++
T Consensus 221 ~~~~~~~~~~H~~~----~----~~~~~~~~fl~~~~ 249 (249)
T PRK10566 221 LTCLWEPGVRHRIT----P----EALDAGVAFFRQHL 249 (249)
T ss_pred eEEEecCCCCCccC----H----HHHHHHHHHHHhhC
Confidence 57788999999865 2 26789999998753
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=1.4e-25 Score=194.80 Aligned_cols=264 Identities=13% Similarity=0.089 Sum_probs=153.5
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHHH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEKV 110 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 110 (323)
..+...+| +|+|..+++.+ +|+|||+||++++.. .|..+.+.| ..||+|+++|+||||.|+... ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~---~~~ivllHG~~~~~~-~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD---RPTVVLVHGYPDNHE-VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC---CCeEEEEcCCCchHH-HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 34455678 99999988643 689999999998877 899999999 457999999999999997543 234589999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcccCC------CCC---chhhHHH
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIP------ENM---KPSKLHL 179 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~~~------~~~---~~~~~~~ 179 (323)
++|+..+++++... .+++|+||||||.+++.++... +.. +..++.++++.... ... .......
T Consensus 80 a~dl~~~i~~l~~~-----~~~~lvGhS~Gg~~a~~~a~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 80 ADDFAAVIDAVSPD-----RPVHLLAHDWGSIQGWEAVTRPRAAGR-IASFTSVSGPSLDHVGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHhCCC-----CcEEEEecChHHHHHHHHHhCccchhh-hhhheeccCCchHHHHHHHhhcccccchhhhhH
Confidence 99999999998643 2599999999999998887662 333 44444433221100 000 0000000
Q ss_pred HHhhhhhhhhcc-cccCCcccccccccCChHHHHHHhcCCCCcCCCCc--------hhHHHHHHHHH--HHHHhcCCCCC
Q 020633 180 FMYGLLFGLADT-WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR--------VGTMREIARVC--QYIQDNFSKVT 248 (323)
Q Consensus 180 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~ 248 (323)
............ ................................... ........... .........++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 000000000000 00000000000000000011111100000000000 00000000000 00112345589
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|+++|+|++|.++|.+..+.+.+.+ ++.++++++ +||+.++++|++ +.+.|.+|+.+.
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~~ 292 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDAV 292 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhH----HHHHHHHHHHhc
Confidence 99999999999999998888887776 667777776 699999877766 888888998764
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.94 E-value=5.7e-25 Score=177.72 Aligned_cols=274 Identities=13% Similarity=0.065 Sum_probs=164.6
Q ss_pred cceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCcccc-----HHHHHHHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWM-----FQKICISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.+...+...++.+..+.|.+..+ ..+++||++||+..+.. . ++.+++.|+++||+|+++|++|+|.+...
T Consensus 36 ~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~--- 111 (350)
T TIGR01836 36 VTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY--- 111 (350)
T ss_pred CCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---
Confidence 34444555555455555666431 34568999999854322 3 36799999999999999999999987532
Q ss_pred CCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----
Q 020633 104 LGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---- 178 (323)
Q Consensus 104 ~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~---- 178 (323)
.++++++. ++.++++++....+ ..+++++||||||.+++.++..+|++ |+++|+++++.............
T Consensus 112 -~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~-v~~lv~~~~p~~~~~~~~~~~~~~~~~ 187 (350)
T TIGR01836 112 -LTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDK-IKNLVTMVTPVDFETPGNMLSNWARHV 187 (350)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchh-eeeEEEeccccccCCCCchhhhhcccc
Confidence 26777764 48888888877654 56899999999999999999999988 99999999887654322111000
Q ss_pred --HHHhhhhhhhhcc------cc-cCCcccccc------cccCChHH-HHHHhc-CCCCcCCCCchhHHHHHHHHH----
Q 020633 179 --LFMYGLLFGLADT------WA-AMPDNKMVG------KAIKDPEK-LKVIAS-NPRRYTGKPRVGTMREIARVC---- 237 (323)
Q Consensus 179 --~~~~~~~~~~~~~------~~-~~~~~~~~~------~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~---- 237 (323)
......... .+. +. ..+...... ....++.. ...... ...............++....
T Consensus 188 ~~~~~~~~~~~-~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 188 DIDLAVDTMGN-IPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred CHHHHHHhcCC-CCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 000000000 000 00 000000000 00011111 111000 000000001111112221111
Q ss_pred HHH---------HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHH
Q 020633 238 QYI---------QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 238 ~~~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
... ...+.++++|+++++|++|.++|++.++.+.+.+.+.+.++++++ +||...+..+. ..+++++.|.
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~-~~~~v~~~i~ 344 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGK-AQKEVPPAIG 344 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECch-hHhhhhHHHH
Confidence 000 113567899999999999999999999999998865567778887 68988866553 4677999999
Q ss_pred HHHHHH
Q 020633 309 EWIDER 314 (323)
Q Consensus 309 ~fl~~~ 314 (323)
+||.++
T Consensus 345 ~wl~~~ 350 (350)
T TIGR01836 345 KWLQAR 350 (350)
T ss_pred HHHHhC
Confidence 999763
No 54
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=1.4e-24 Score=175.01 Aligned_cols=290 Identities=13% Similarity=0.140 Sum_probs=172.6
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCC----CCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEe
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLD----QKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAA 89 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~ 89 (323)
++....+.+.+++.+++.|| .|......+.+ ..++++||++||+++++. .| +.++..|+++||+|+++
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccc
Confidence 34557899999999999999 88887765332 134689999999987655 44 34666788999999999
Q ss_pred cCCCCcCCCCC-------cc-cCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC--ceeE
Q 020633 90 DLLGHGRSDGI-------RC-YLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN--TWTG 158 (323)
Q Consensus 90 d~~G~G~s~~~-------~~-~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~ 158 (323)
|+||++.|.+. .. ...++++++ .|+.++++++.... ..+++++|||+||.+++.++ .+|+. +|+.
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~ 189 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEA 189 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHH
Confidence 99998866321 11 124678888 89999999986532 45899999999999998555 56652 2888
Q ss_pred EEEccCcccCCCCCchhhHH-HH-HhhhhhhhhcccccCCccccc----ccccCCh----HHHHHHhcCCCC--------
Q 020633 159 LIFSAPLFVIPENMKPSKLH-LF-MYGLLFGLADTWAAMPDNKMV----GKAIKDP----EKLKVIASNPRR-------- 220 (323)
Q Consensus 159 ~vl~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~-------- 220 (323)
+++++|.........+.... .. ....+..........+..... ....... .....+......
T Consensus 190 ~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 190 AALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred HHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 88888876543322221100 00 000000000000000000000 0000000 000000000000
Q ss_pred ----cCCCCchhHHHHHHHHH----------------H------HHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHH
Q 020633 221 ----YTGKPRVGTMREIARVC----------------Q------YIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 221 ----~~~~~~~~~~~~~~~~~----------------~------~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
.....+...+..+.... . ...-.++++ ++|+++++|++|.+++++.++.+.+
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~ 349 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA 349 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 00000111111111100 0 001135666 5899999999999999999999999
Q ss_pred HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.. ..+++.+++++|..++- .++..+.+.+.|.+||++..+.
T Consensus 350 ~Lp~-~~~l~~l~~~gH~dfi~-~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 350 ELPS-KPELLYLENYGHIDFLL-STSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred HCCC-ccEEEEcCCCCCHHHHh-CcchHHHHHHHHHHHHHHhhhc
Confidence 9842 25788899999974321 1345667999999999987654
No 55
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.93 E-value=3e-24 Score=161.42 Aligned_cols=287 Identities=13% Similarity=0.092 Sum_probs=173.7
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
...+.+++..+.++|| .+-.....++....+|.||++||+.|++. .+.+.+++.+.++||.|+++++||++.+.....
T Consensus 44 ~~~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 44 KPKVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ccccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4567788889999999 66666666554466789999999976643 255778899999999999999999999875333
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHH-HHHHHhhhcCCCceeEEEEccCcccCCCCC---ch----
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA-ATMLMYFQSEPNTWTGLIFSAPLFVIPENM---KP---- 174 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~-~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~---~~---- 174 (323)
..+. .-+.+|+..++++++...+ ..++..+|.|+||. ++..++.+-.+..+.+.+.++.+.++.... ..
T Consensus 124 ~~yh-~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 124 RLYH-SGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL 200 (345)
T ss_pred ceec-ccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh
Confidence 3222 3334999999999998776 78999999999995 454444443333355665555444321100 00
Q ss_pred hhHHHHHhhhhhhhhcccccCCccccccc-ccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
......+...+.................. ...-.....+.+.+.........+....++++... ....+.+|.+|+|+
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS-s~~~L~~Ir~PtLi 279 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS-SLPLLPKIRKPTLI 279 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc-ccccccccccceEE
Confidence 00011111111111100000000000000 00000011112222222222222333444444333 35678999999999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhH-HHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA-NLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~-~~~~~~i~~fl~~~~~ 316 (323)
|++.+|++++++........ .++++.+..-+.+||..++....... ....+.+.+||+..+.
T Consensus 280 i~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999998776655543 34889999999999999987433222 2567788899987654
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=2.4e-24 Score=156.58 Aligned_cols=218 Identities=20% Similarity=0.263 Sum_probs=160.2
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+-...++..| .+....+.+.. ...+++++.||...+.+ ....+...|.. -++.++++|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCccc----
Confidence 34456677777 66666666664 45799999999966655 33334444544 2699999999999999987643
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+|+.++.++++.+++ ...+++|+|+|+|...++.+|.+.| ++++|+.+|+.+......+.
T Consensus 109 ~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~rv~~~~------------ 172 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP---LAAVVLHSPFTSGMRVAFPD------------ 172 (258)
T ss_pred ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC---cceEEEeccchhhhhhhccC------------
Confidence 3677999999999999985 5789999999999999999999988 78999999986532211100
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
....+.-..+ . ..+..+.++||+|++||++|.+++....
T Consensus 173 --------~~~~~~~d~f-----------------------------~----~i~kI~~i~~PVLiiHgtdDevv~~sHg 211 (258)
T KOG1552|consen 173 --------TKTTYCFDAF-----------------------------P----NIEKISKITCPVLIIHGTDDEVVDFSHG 211 (258)
T ss_pred --------cceEEeeccc-----------------------------c----ccCcceeccCCEEEEecccCceeccccc
Confidence 0000000000 0 1356678899999999999999999999
Q ss_pred HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+++..+. ..+-.++.|+||... +... ++.+.+..|+.....
T Consensus 212 ~~Lye~~k~-~~epl~v~g~gH~~~-~~~~----~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 212 KALYERCKE-KVEPLWVKGAGHNDI-ELYP----EYIEHLRRFISSVLP 254 (258)
T ss_pred HHHHHhccc-cCCCcEEecCCCccc-ccCH----HHHHHHHHHHHHhcc
Confidence 999999853 368899999999988 2222 378888888876544
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=175.56 Aligned_cols=260 Identities=12% Similarity=0.066 Sum_probs=158.3
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc------------ccHHHHHH---HHhhCCcEEEEecCCCCcCCCCC-----
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG------------WMFQKICI---SFATWGYAVFAADLLGHGRSDGI----- 100 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~----- 100 (323)
+|.|..||..+....++||++|++.+++. ..|..++- .|-...|.||++|..|-|.|+.+
T Consensus 42 ~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~t 121 (389)
T PRK06765 42 QMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITT 121 (389)
T ss_pred eEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCC
Confidence 78999999877566799999999987531 02444432 23334599999999987753210
Q ss_pred ---------------cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 101 ---------------RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ---------------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
.....+++++++++..++++++.+ ++. ++||||||++++.+|.++|++ |+++|++++
T Consensus 122 gp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~------~~~~vvG~SmGG~ial~~a~~~P~~-v~~lv~ia~ 194 (389)
T PRK06765 122 GPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA------RLHAVMGPSMGGMQAQEWAVHYPHM-VERMIGVIG 194 (389)
T ss_pred CCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEec
Confidence 112358999999999999988765 675 999999999999999999999 999999987
Q ss_pred cccCCCCCchhhHHHHHhhhhhhhhcccccC-------Ccc------ccccc-ccCCh----------------------
Q 020633 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAM-------PDN------KMVGK-AIKDP---------------------- 208 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~-~~~~~---------------------- 208 (323)
............ .......+. ..+.|... +.. ..... .....
T Consensus 195 ~~~~~~~~~~~~-~~~~~~ai~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~ 272 (389)
T PRK06765 195 NPQNDAWTSVNV-LQNWAEAIR-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVST 272 (389)
T ss_pred CCCCChhHHHHH-HHHHHHHHH-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccc
Confidence 654332210000 000000000 00000000 000 00000 00000
Q ss_pred --HHHHHHhcCCCCcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC-
Q 020633 209 --EKLKVIASNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS- 276 (323)
Q Consensus 209 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 276 (323)
.....+......+........+..+.+..+ ++.+.+.++++|+|+|+|+.|.++|++..+.+.+.++.
T Consensus 273 ~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~ 352 (389)
T PRK06765 273 LTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ 352 (389)
T ss_pred hhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 000110000000111111111111111111 23456778999999999999999999999988888842
Q ss_pred -CCccEEEecC-CCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 277 -ADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 277 -~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++++++++ +||..++++|+. +.+.|.+||++
T Consensus 353 ~~~a~l~~I~s~~GH~~~le~p~~----~~~~I~~FL~~ 387 (389)
T PRK06765 353 GKYAEVYEIESINGHMAGVFDIHL----FEKKIYEFLNR 387 (389)
T ss_pred CCCeEEEEECCCCCcchhhcCHHH----HHHHHHHHHcc
Confidence 3688999985 999999766665 88999999865
No 58
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=1.5e-23 Score=180.04 Aligned_cols=249 Identities=15% Similarity=0.127 Sum_probs=169.2
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCc---ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCC--
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKV---KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSD-- 98 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~---~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-- 98 (323)
...+.+.+.+...|| +|+++.+.|.+.++ .|+||++||++... .+.|....+.|+.+||.|+.+|+||.+.-.
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 345667889999999 99999999976432 48999999997432 235777888999999999999999764321
Q ss_pred -CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 99 -GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 99 -~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
.......--....+|+.+.++++.....++.++++++|+|+||++++.++.+.+ . +++.+...+..........
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~-f~a~~~~~~~~~~~~~~~~--- 515 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-R-FKAAVAVAGGVDWLLYFGE--- 515 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-h-hheEEeccCcchhhhhccc---
Confidence 110000012334577888888776666667789999999999999999999888 4 7777776654431110000
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
... .+.......... . .. ....+.... ......++++|+|+|||+
T Consensus 516 ------~~~----~~~~~~~~~~~~-~-~~-~~~~~~~~s----------------------p~~~~~~i~~P~LliHG~ 560 (620)
T COG1506 516 ------STE----GLRFDPEENGGG-P-PE-DREKYEDRS----------------------PIFYADNIKTPLLLIHGE 560 (620)
T ss_pred ------cch----hhcCCHHHhCCC-c-cc-ChHHHHhcC----------------------hhhhhcccCCCEEEEeec
Confidence 000 000000000000 0 00 000000000 234567889999999999
Q ss_pred CCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 258 ADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|..||.+++..+.+.+. +.+++++++|+.+|.+.- .+....+.+.+.+|++++++.
T Consensus 561 ~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 561 EDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHHHhcC
Confidence 999999999999998884 456799999999999983 466778999999999998753
No 59
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.91 E-value=4.7e-24 Score=147.74 Aligned_cols=235 Identities=13% Similarity=0.095 Sum_probs=156.2
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhc--
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-- 113 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-- 113 (323)
.+| +|.|..+|.+. ..|+++.|.-++....|......|.+. .+.++++|.||+|.|.++.... ..+-+.+|
T Consensus 28 vng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~Da~ 102 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHGP----NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMKDAE 102 (277)
T ss_pred ecCceeeeeecCCCC----ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHHhHH
Confidence 356 99999999864 588999998777655777666666544 4899999999999998765543 44444444
Q ss_pred -HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 114 -SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 114 -~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
...+++.|+.+ ++.++|+|-||..|+..|+++++. |..+|+.++........... ...++.. ..|
T Consensus 103 ~avdLM~aLk~~------~fsvlGWSdGgiTalivAak~~e~-v~rmiiwga~ayvn~~~~ma------~kgiRdv-~kW 168 (277)
T KOG2984|consen 103 YAVDLMEALKLE------PFSVLGWSDGGITALIVAAKGKEK-VNRMIIWGAAAYVNHLGAMA------FKGIRDV-NKW 168 (277)
T ss_pred HHHHHHHHhCCC------CeeEeeecCCCeEEEEeeccChhh-hhhheeecccceecchhHHH------HhchHHH-hhh
Confidence 44555555543 899999999999999999999999 99999987765443221110 0000000 001
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH---------HHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC---------QYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
.....+.+ ...+..+.... .+..+.... +-.+..+.+++||+|+++|+.|++++
T Consensus 169 s~r~R~P~-e~~Yg~e~f~~----------------~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~ 231 (277)
T KOG2984|consen 169 SARGRQPY-EDHYGPETFRT----------------QWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCG 231 (277)
T ss_pred hhhhcchH-HHhcCHHHHHH----------------HHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCC
Confidence 00000000 00001110000 001111111 11345688999999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
...+-.+.... +.+++.+++.++|.+++ .++++++..+.+||++.
T Consensus 232 ~~hv~fi~~~~--~~a~~~~~peGkHn~hL----rya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 232 DPHVCFIPVLK--SLAKVEIHPEGKHNFHL----RYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCccchhhhc--ccceEEEccCCCcceee----echHHHHHHHHHHHhcc
Confidence 99888887777 77899999999999994 56667999999999753
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.91 E-value=2e-23 Score=147.89 Aligned_cols=145 Identities=30% Similarity=0.487 Sum_probs=114.6
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
+||++||++++.. .|..+++.|+++||.|+.+|+|++|.+... .++.++++.+..... +..+++++|
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 6899999999877 799999999999999999999999987221 244445544322111 266999999
Q ss_pred echhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhc
Q 020633 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS 216 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (323)
||+||.+++.++.+. .+ ++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~-v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PR-VKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TT-ESEEEEESESSG-------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cc-eeEEEEecCccc-------------------------------------------------
Confidence 999999999999988 44 999999998311
Q ss_pred CCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 217 NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
.+.+.+.++|+++++|++|..++.+..+.+++.++ .+.+++++++++|+
T Consensus 97 ------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12234567799999999999999999999999985 46899999999995
No 61
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=2.3e-22 Score=157.05 Aligned_cols=283 Identities=14% Similarity=0.127 Sum_probs=172.2
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCCC------CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQ------KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~------~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
...+.+++..++.+|| .+...+..+... ...|+||++||+.+++. .+-+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 4567889999999999 998888866542 45799999999976653 355778888888999999999999998
Q ss_pred CCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCc--eeEEEEccCcccC--CCCC
Q 020633 97 SDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNT--WTGLIFSAPLFVI--PENM 172 (323)
Q Consensus 97 s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~--v~~~vl~~~~~~~--~~~~ 172 (323)
|.-.....+ -..+.+|+.+++++++.+++ ..++..+|.||||.+.+.|..+..+.. +.++.+.+|+-.. ....
T Consensus 168 ~~LtTpr~f-~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~ 244 (409)
T KOG1838|consen 168 SKLTTPRLF-TAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI 244 (409)
T ss_pred CccCCCcee-ecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH
Confidence 874433332 24457999999999999998 779999999999999999998854321 5556666665432 1110
Q ss_pred chh---hHH-HHHhhhhhhhhc-ccccCCcc-cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC
Q 020633 173 KPS---KLH-LFMYGLLFGLAD-TWAAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 173 ~~~---~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
... +.. ..+...+.+... ........ .......+....+++.+.......+ +....++++... ....+.+
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~g---f~~~deYY~~aS-s~~~v~~ 320 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFG---FKSVDEYYKKAS-SSNYVDK 320 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcC---CCcHHHHHhhcc-hhhhccc
Confidence 000 000 011111111110 00000000 0000011111112222111111111 122333333322 4567889
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHH-HHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD-MREWIDERV 315 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~-i~~fl~~~~ 315 (323)
|++|+|+|++.+|+++|.+..- ..+...++++-+++-..+||..+++.-........+. +.+|+....
T Consensus 321 I~VP~L~ina~DDPv~p~~~ip-~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEAIP-IDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccccEEEEecCCCCCCCcccCC-HHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9999999999999999986433 2233345777788888899999987622122333343 777776544
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=1.1e-22 Score=168.33 Aligned_cols=263 Identities=10% Similarity=0.022 Sum_probs=155.3
Q ss_pred cccccCcccceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccHH-----HHHHHHhhCCcEEEEecCCCCc
Q 020633 22 YYTSQGVRNGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQ-----KICISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G 95 (323)
|--...+..+...+...++.+..+.|.|... ..+++||++||+..... .++ .+++.|.++||+|+++|++|+|
T Consensus 154 f~vg~~~a~Tpg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg 232 (532)
T TIGR01838 154 FEVGRNLATTPGAVVFENELFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPD 232 (532)
T ss_pred eeeCCCCCCCCCeEEEECCcEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCC
Confidence 3334455556656666666666667777642 25789999999974433 553 7999999999999999999999
Q ss_pred CCCCCcccCCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH----HHhhhc-CCCceeEEEEccCcccCC
Q 020633 96 RSDGIRCYLGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM----LMYFQS-EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~~v~~~vl~~~~~~~~ 169 (323)
.+.... ++++++. ++.+.++.+....+ ..+++++||||||.++. .++... +++ |++++++++..++.
T Consensus 233 ~s~~~~----~~ddY~~~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r-v~slvll~t~~Df~ 305 (532)
T TIGR01838 233 ASQADK----TFDDYIRDGVIAALEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKR-IKSATFFTTLLDFS 305 (532)
T ss_pred cccccC----ChhhhHHHHHHHHHHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCc-cceEEEEecCcCCC
Confidence 885432 3445553 46666666654433 55899999999999852 244554 666 99999999887765
Q ss_pred CCCchhhHH-HHHhhhhhhhhcccccCCcccc---cccccCChH------------------HHHHHhcCCCCcCCCCch
Q 020633 170 ENMKPSKLH-LFMYGLLFGLADTWAAMPDNKM---VGKAIKDPE------------------KLKVIASNPRRYTGKPRV 227 (323)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 227 (323)
......... ......+..........+...+ +........ ....+..+...+ ..
T Consensus 306 ~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~l----P~ 381 (532)
T TIGR01838 306 DPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNL----PG 381 (532)
T ss_pred CcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccc----hH
Confidence 422111100 0000000000000000000000 000000000 000011111111 11
Q ss_pred hHHHHHHHHH----H---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 228 GTMREIARVC----Q---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 228 ~~~~~~~~~~----~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
....++.+.. . .....+.+|++|+++|.|++|.++|.+.+..+.+.+ ++.+..+++++||..+++
T Consensus 382 ~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 382 KMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVV 459 (532)
T ss_pred HHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhh
Confidence 1122221111 0 012356789999999999999999999999998888 577888999999999988
Q ss_pred CCch
Q 020633 295 EPDE 298 (323)
Q Consensus 295 ~~~~ 298 (323)
+|..
T Consensus 460 nPp~ 463 (532)
T TIGR01838 460 NPPS 463 (532)
T ss_pred CCCC
Confidence 7753
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.91 E-value=9.6e-23 Score=148.60 Aligned_cols=126 Identities=19% Similarity=0.163 Sum_probs=98.9
Q ss_pred eEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
+.+...++++..+..++.. ...|.++++||+|.+.- .|..++..+... ..+|+++|+||||++.-......+.+.++
T Consensus 53 v~i~~~~~t~n~Y~t~~~~-t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~ 130 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSA-TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMS 130 (343)
T ss_pred cccCCCcceEEEEEecCCC-CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHH
Confidence 4444444456666666653 67899999999997766 899999988765 56789999999999987666667999999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~ 165 (323)
.|+.++++.+-.+. ..+++|+||||||.+|.+.|.. -|. +.++++++-.
T Consensus 131 KD~~~~i~~~fge~---~~~iilVGHSmGGaIav~~a~~k~lps--l~Gl~viDVV 181 (343)
T KOG2564|consen 131 KDFGAVIKELFGEL---PPQIILVGHSMGGAIAVHTAASKTLPS--LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHhccC---CCceEEEeccccchhhhhhhhhhhchh--hhceEEEEEe
Confidence 99999999887543 5589999999999999887765 344 8888887643
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.90 E-value=5.1e-22 Score=150.34 Aligned_cols=181 Identities=12% Similarity=0.065 Sum_probs=125.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc----------c---CCChHHHhhcHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC----------Y---LGDMEKVAASSLSFFK 119 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----------~---~~~~~~~~~d~~~~l~ 119 (323)
.++++||++||+|++.. .|..+++.|...++.+..++.+|...+..... . ...+....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 56789999999999887 78899999987765556666666532211000 0 0012333445556666
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNK 199 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
++..+..++..+++++|||+||.+++.++..+|+. +.+++.+++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~-~~~vv~~sg~~~~~------------------------------ 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL-AGRVIAFSGRYASL------------------------------ 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc-ceEEEEeccccccc------------------------------
Confidence 66666555567899999999999999999888886 77777665421100
Q ss_pred ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CC
Q 020633 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SA 277 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 277 (323)
......++|+++++|++|.++|.+.++.+.+.+. +.
T Consensus 142 ------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 142 ------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred ------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 0001136799999999999999999988888774 23
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++++++++||.+. .+ ..+.+.+||.+.+
T Consensus 180 ~~~~~~~~~~gH~i~----~~----~~~~~~~~l~~~l 209 (232)
T PRK11460 180 DVTLDIVEDLGHAID----PR----LMQFALDRLRYTV 209 (232)
T ss_pred CeEEEEECCCCCCCC----HH----HHHHHHHHHHHHc
Confidence 568888999999987 44 4555566665554
No 65
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=3e-22 Score=146.52 Aligned_cols=183 Identities=13% Similarity=0.059 Sum_probs=118.3
Q ss_pred eEEEEecCCCCCccccHH--HHHHHHhh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 56 ATVYMTHGYGSDTGWMFQ--KICISFAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~--~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
|+||++||++++.. .|. .+.+.|.+ .+|+|+++|+||++ ++.++++.++++.+.. .+
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~------~~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGG------DP 62 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCC------CC
Confidence 58999999998876 555 34566654 26999999999884 3456777777776543 38
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.+|.++|. .+|+++|..... ..+...+.... . .....
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~----~~vl~~~~~~~~---------~~~~~~~~~~~-~-------~~~~~-------- 113 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML----PAVVVNPAVRPF---------ELLTDYLGENE-N-------PYTGQ-------- 113 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC----CEEEECCCCCHH---------HHHHHhcCCcc-c-------ccCCC--------
Confidence 9999999999999999999884 257788754310 11111000000 0 00000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
. .............. ...+. ..+|+++++|++|.++|++.+..+++. ++.++++|++|.
T Consensus 114 ------------~--~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~ 173 (190)
T PRK11071 114 ------------Q--YVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHA 173 (190)
T ss_pred ------------c--EEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcc
Confidence 0 00000111111101 11122 577889999999999999999998874 356788999999
Q ss_pred cccCCCchhHHHHHHHHHHHHH
Q 020633 291 LIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+. . .+++.+.+.+|+.
T Consensus 174 f~----~--~~~~~~~i~~fl~ 189 (190)
T PRK11071 174 FV----G--FERYFNQIVDFLG 189 (190)
T ss_pred hh----h--HHHhHHHHHHHhc
Confidence 86 2 2668888998874
No 66
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.90 E-value=2e-22 Score=152.25 Aligned_cols=201 Identities=18% Similarity=0.168 Sum_probs=139.2
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcC-CCCCccc-C--------CChHHHhh
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGR-SDGIRCY-L--------GDMEKVAA 112 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~~~-~--------~~~~~~~~ 112 (323)
..++..|.+.+++|.||++|++.|-.. ..+.+++.|+++||.|+++|+-+-.. ....... . ...+....
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 456777776457899999999988766 77889999999999999999864433 1111100 0 01345668
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
++.+.++++......+..+|.++|+|+||.+++.++... .. ++++|...|..... .
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~-~~a~v~~yg~~~~~----~------------------ 136 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PR-VDAAVSFYGGSPPP----P------------------ 136 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TT-SSEEEEES-SSSGG----G------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cc-cceEEEEcCCCCCC----c------------------
Confidence 888889999887644567999999999999999999887 44 89998887611000 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
......++++|+++++|++|+.++.+..+.+.+
T Consensus 137 -----------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 137 -----------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp -----------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred -----------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 123456789999999999999999998888877
Q ss_pred Hc--CCCCccEEEecCCCcccccCCCc----hhHHHHHHHHHHHHHHHH
Q 020633 273 KA--SSADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDERV 315 (323)
Q Consensus 273 ~~--~~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~ 315 (323)
.+ .+...++++|+|++|.+...... ...++.++.+.+||++++
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 77 24568999999999999855443 456778889999998764
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.90 E-value=2e-22 Score=153.42 Aligned_cols=132 Identities=17% Similarity=0.236 Sum_probs=107.5
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCc---cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT---GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..+++...|.+....+.|.+.+++++||++||++... ...|..+++.|+++||.|+++|+||||.|.+.... .+++
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~ 80 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWD 80 (266)
T ss_pred CEEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHH
Confidence 3566677777777777776545678999999998642 22567788999999999999999999999765432 3788
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.+++|+..+++++.... ..+++|+||||||.+++.++.++|+. ++++|+++|....
T Consensus 81 ~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~-v~~lVL~~P~~~g 136 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAK-CNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccc-cceEEEeccccch
Confidence 89999999998887652 45899999999999999999999988 9999999987653
No 68
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.90 E-value=3.9e-22 Score=139.71 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=156.3
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+.+.++...+ ++....... ++..++|++||+-++... ....++..|.+.|+.++.+|++|.|.|.+.-.+ ...
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~t---gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~ 85 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHET---GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNY 85 (269)
T ss_pred eeEEEeccCCCchhhcceecc---CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccc
Confidence 34566666667 666544444 346899999999987642 445678889999999999999999999875433 356
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++|+..+++++.... ..--+++|||-||.+++.++.++++ ++-+|.+++-++......... ....+.+
T Consensus 86 ~~eadDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRydl~~~I~eRl----g~~~l~~ 156 (269)
T KOG4667|consen 86 NTEADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRYDLKNGINERL----GEDYLER 156 (269)
T ss_pred cchHHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC--chheEEcccccchhcchhhhh----cccHHHH
Confidence 667799999999998642 1113589999999999999999988 778888877555332211000 0000000
Q ss_pred hhc-c-cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC--CcCEEEEeeCCCcccC
Q 020633 188 LAD-T-WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTC 263 (323)
Q Consensus 188 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~ 263 (323)
... . +...+.+. .+.......... .+...+..+...+| +||||-+||..|.+||
T Consensus 157 ike~Gfid~~~rkG--------------------~y~~rvt~eSlm--drLntd~h~aclkId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 157 IKEQGFIDVGPRKG--------------------KYGYRVTEESLM--DRLNTDIHEACLKIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred HHhCCceecCcccC--------------------CcCceecHHHHH--HHHhchhhhhhcCcCccCceEEEeccCCceee
Confidence 000 0 00000000 000000001111 11111122333334 8999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.++++.+ ++.++.++||++|..... ..+.......|.+.+.
T Consensus 215 ve~AkefAk~i--~nH~L~iIEgADHnyt~~-----q~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 215 VEDAKEFAKII--PNHKLEIIEGADHNYTGH-----QSQLVSLGLEFIKTRI 259 (269)
T ss_pred chhHHHHHHhc--cCCceEEecCCCcCccch-----hhhHhhhcceeEEeee
Confidence 99999999999 779999999999998732 2235555566655443
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.90 E-value=9.7e-23 Score=153.51 Aligned_cols=203 Identities=16% Similarity=0.131 Sum_probs=136.2
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHH
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~ 147 (323)
.|......|+++||.|+.+|+||.+...... .....-...++|+.++++++.....++..++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 3456677898999999999999987543110 0111224567999999999988877778899999999999999999
Q ss_pred hhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH-HHHhcCCCCcCCCCc
Q 020633 148 YFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPR 226 (323)
Q Consensus 148 a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 226 (323)
+.++|+. +++++..+|..+.......... ... ..... .....
T Consensus 82 ~~~~~~~-f~a~v~~~g~~d~~~~~~~~~~-------------------------------~~~~~~~~~-~~~~~---- 124 (213)
T PF00326_consen 82 ATQHPDR-FKAAVAGAGVSDLFSYYGTTDI-------------------------------YTKAEYLEY-GDPWD---- 124 (213)
T ss_dssp HHHTCCG-SSEEEEESE-SSTTCSBHHTCC-------------------------------HHHGHHHHH-SSTTT----
T ss_pred hccccee-eeeeeccceecchhcccccccc-------------------------------ccccccccc-Cccch----
Confidence 9989998 9999999987765433221100 000 00000 00000
Q ss_pred hhHHHHHHHHHHHHHhcCCC--CCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHH
Q 020633 227 VGTMREIARVCQYIQDNFSK--VTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANL 302 (323)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~ 302 (323)
......... ....+.+ +++|+|+++|++|..||++.+..+.+.+. +.++++++++++||.+. ..+....
T Consensus 125 ---~~~~~~~~s-~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~---~~~~~~~ 197 (213)
T PF00326_consen 125 ---NPEFYRELS-PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG---NPENRRD 197 (213)
T ss_dssp ---SHHHHHHHH-HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT---SHHHHHH
T ss_pred ---hhhhhhhhc-cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC---CchhHHH
Confidence 000111111 2233444 78999999999999999999999988874 34589999999999655 2345668
Q ss_pred HHHHHHHHHHHHHhh
Q 020633 303 VLKDMREWIDERVER 317 (323)
Q Consensus 303 ~~~~i~~fl~~~~~~ 317 (323)
..+.+.+||+++++.
T Consensus 198 ~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 198 WYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999998863
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=1.2e-20 Score=142.03 Aligned_cols=213 Identities=17% Similarity=0.151 Sum_probs=165.9
Q ss_pred ceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCc--c----c
Q 020633 31 GKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIR--C----Y 103 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~--~----~ 103 (323)
+.+.+..+++++..+...|....+.|.||++|++.+-.. ..+.+++.|+..||.|+++|+-+. |.+.... . .
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 446677777789999999987555699999999998877 889999999999999999999874 3332111 0 0
Q ss_pred ----CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 104 ----LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 104 ----~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
..+..+...|+.+.+++|.....++..+|.++|+||||.+++.++...|+ +++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~--v~a~v~fyg~~~~~~--------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE--VKAAVAFYGGLIADD--------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC--ccEEEEecCCCCCCc---------
Confidence 11236778999999999998765567789999999999999999998874 899988776543110
Q ss_pred HHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCC
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
.....++++|+|++.|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 1123578999999999999
Q ss_pred cccCchhHHHHHHHcCCC--CccEEEecCCCcccccCC-------CchhHHHHHHHHHHHHHHHHh
Q 020633 260 GVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGE-------PDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-------~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+|.+....+.+.+... .+++.+++++.|.++-.. .....+..++.+.+||++.+.
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 999998888887777533 578899999999988432 234677889999999998764
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.88 E-value=6.4e-20 Score=143.10 Aligned_cols=228 Identities=15% Similarity=0.132 Sum_probs=133.8
Q ss_pred eeEEEcC-CC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHH--HHHHH-hhCCcEEEEecC--CCCcCCCCCc-
Q 020633 32 KKYFETP-NG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQK--ICISF-ATWGYAVFAADL--LGHGRSDGIR- 101 (323)
Q Consensus 32 ~~~~~~~-~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~--~~~~l-~~~g~~v~~~d~--~G~G~s~~~~- 101 (323)
...+.+. .+ ++.|.+|.|++ .++.|+|+++||++++.. .|.. ....+ .+.|+.|+++|. +|+|.+....
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~ 93 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDA 93 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccc
Confidence 3344443 33 88899999864 356799999999998765 4432 23344 456999999998 5555332100
Q ss_pred ------------------ccCCChHH-HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEc
Q 020633 102 ------------------CYLGDMEK-VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFS 162 (323)
Q Consensus 102 ------------------~~~~~~~~-~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~ 162 (323)
...+.... .++++..+++. ..+++..+++++||||||.+++.++.++|+. +++++++
T Consensus 94 w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~-~~~~~~~ 169 (275)
T TIGR02821 94 WDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA---QFPLDGERQGITGHSMGGHGALVIALKNPDR-FKSVSAF 169 (275)
T ss_pred ccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh---hCCCCCCceEEEEEChhHHHHHHHHHhCccc-ceEEEEE
Confidence 00011122 23455444443 2233356899999999999999999999999 9999999
Q ss_pred cCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh
Q 020633 163 APLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
+|....... .+... .....+..+...... .+... ...
T Consensus 170 ~~~~~~~~~---~~~~~-----------------------------~~~~~l~~~~~~~~~-------~~~~~----~~~ 206 (275)
T TIGR02821 170 APIVAPSRC---PWGQK-----------------------------AFSAYLGADEAAWRS-------YDASL----LVA 206 (275)
T ss_pred CCccCcccC---cchHH-----------------------------HHHHHhcccccchhh-------cchHH----HHh
Confidence 987653211 00000 000000000000000 00000 111
Q ss_pred cCCCCCcCEEEEeeCCCcccCc-hhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.. ....|+++++|+.|+.++. .....+.+.+. +..+++.+++|++|.+.+ .........+|..++
T Consensus 207 ~~-~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 207 DG-GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred hc-ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 11 2467999999999999998 45555555553 244788999999998872 333555555665543
No 72
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=4.1e-21 Score=174.20 Aligned_cols=272 Identities=12% Similarity=0.115 Sum_probs=159.6
Q ss_pred cceeEEEcCCCcEEEEEecCCCC-----CcceEEEEecCCCCCccccHHH-----HHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQ-----KVKATVYMTHGYGSDTGWMFQK-----ICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~-----~~~~~vv~~HG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
.+...+...++.+..+.|.|... ..+++|||+||++.+.. .|+. +.+.|.++||+|+++|+ |.++.
T Consensus 37 ~tp~~vv~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~ 112 (994)
T PRK07868 37 PSPFQIVESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDK 112 (994)
T ss_pred CCCCcEEEEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCCh
Confidence 34445555556555666666531 35689999999987665 7765 37889999999999994 55554
Q ss_pred Ccc-cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC-CCceeEEEEccCcccCCCCCchhhH
Q 020633 100 IRC-YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE-PNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 100 ~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
... ...++.+++..+.+.++.+.... ..+++++||||||.+++.+++.++ ++ |+++|++++..++.........
T Consensus 113 ~~~~~~~~l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~-v~~lvl~~~~~d~~~~~~~~~~ 188 (994)
T PRK07868 113 VEGGMERNLADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKD-IASIVTFGSPVDTLAALPMGIP 188 (994)
T ss_pred hHcCccCCHHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCc-cceEEEEecccccCCCCcccch
Confidence 322 12466777666666666654332 347999999999999999887654 46 9999998877654322110000
Q ss_pred HH---HHhhhhh-----h-hhcccc-------cCCcc------cccccccC------ChHHHHHHhcCCC-CcCCCCchh
Q 020633 178 HL---FMYGLLF-----G-LADTWA-------AMPDN------KMVGKAIK------DPEKLKVIASNPR-RYTGKPRVG 228 (323)
Q Consensus 178 ~~---~~~~~~~-----~-~~~~~~-------~~~~~------~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~ 228 (323)
.. .....+. . ..+.+. ..+.. .+...... ............. ... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~----g~ 264 (994)
T PRK07868 189 AGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWS----GP 264 (994)
T ss_pred hhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccc----hH
Confidence 00 0000000 0 000000 00000 00000000 0000011110000 000 01
Q ss_pred HHHHHHHHHHH---HH----------hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccE-EEecCCCcccccC
Q 020633 229 TMREIARVCQY---IQ----------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI-KIYDGMYHSLIQG 294 (323)
Q Consensus 229 ~~~~~~~~~~~---~~----------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~ 294 (323)
...++...... .. ..++++++|+|+|+|++|.++|++.++.+.+.+ ++.++ .+++++||+.++.
T Consensus 265 ~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~ 342 (994)
T PRK07868 265 AISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVV 342 (994)
T ss_pred HHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeee
Confidence 11222222210 10 137889999999999999999999999999888 67776 6779999998854
Q ss_pred CCchhHHHHHHHHHHHHHHHHh
Q 020633 295 EPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
-. ...++++..|.+||.++..
T Consensus 343 g~-~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 343 GS-RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred ch-hhhhhhChHHHHHHHHhcc
Confidence 43 4567799999999998864
No 73
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=3.2e-23 Score=158.84 Aligned_cols=205 Identities=20% Similarity=0.166 Sum_probs=123.1
Q ss_pred cEEEEecCCCCcCCCC---CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE
Q 020633 84 YAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v 160 (323)
|+|+++|+||+|.|++ .....++.+++++++..+++.+..+ +++++||||||.+++.++..+|++ |+++|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~vG~S~Gg~~~~~~a~~~p~~-v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK------KINLVGHSMGGMLALEYAAQYPER-VKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS------SEEEEEETHHHHHHHHHHHHSGGG-EEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC------CeEEEEECCChHHHHHHHHHCchh-hcCcE
Confidence 7899999999999985 4444558899999999999988865 799999999999999999999998 99999
Q ss_pred EccCcc----cCCCCCchh-hHHHHHhhhhhh-hhcccccCCccc-----ccccc-cCChHHHHHHhcCCCCcCCCCch-
Q 020633 161 FSAPLF----VIPENMKPS-KLHLFMYGLLFG-LADTWAAMPDNK-----MVGKA-IKDPEKLKVIASNPRRYTGKPRV- 227 (323)
Q Consensus 161 l~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 227 (323)
+++++. ......... ............ ............ ..... ........... ...........
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 152 (230)
T PF00561_consen 74 LISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQ-QYARFAETDAFD 152 (230)
T ss_dssp EESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH-HHHHTCHHHHHH
T ss_pred EEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchh-hhhHHHHHHHHh
Confidence 999852 110000000 000000000000 000000000000 00000 00000000000 00000000000
Q ss_pred hHH--HHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 228 GTM--REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 228 ~~~--~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
... .............+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||..+++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh
Confidence 000 01111112244567789999999999999999999999988888 7899999999999999766665
No 74
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.88 E-value=9.4e-21 Score=130.78 Aligned_cols=195 Identities=16% Similarity=0.181 Sum_probs=144.1
Q ss_pred ceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---C--CccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 31 GKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---S--DTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~--~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
.++.+..+-|++....-.+. ....|..|++|.-+ + +.. .-..++..|.+.||.++.+|+||.|.|.+.-+.
T Consensus 5 ~~v~i~Gp~G~le~~~~~~~-~~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-- 80 (210)
T COG2945 5 PTVIINGPAGRLEGRYEPAK-TPAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-- 80 (210)
T ss_pred CcEEecCCcccceeccCCCC-CCCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC--
Confidence 45666667776655544333 36788999999643 2 222 556778889999999999999999999876543
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCe-EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPG-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.. --.+|..++++|++.+.+ ..+. .+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 81 Gi-GE~~Da~aaldW~~~~hp--~s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~~~--------------- 140 (210)
T COG2945 81 GI-GELEDAAAALDWLQARHP--DSASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPINAY--------------- 140 (210)
T ss_pred Cc-chHHHHHHHHHHHHhhCC--CchhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCCch---------------
Confidence 22 235889999999999876 4444 689999999999999999887 55666666544310
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
-...+....+|.++|+|+.|.+++.
T Consensus 141 -------------------------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 -------------------------------------------------------DFSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred -------------------------------------------------------hhhhccCCCCCceeEecChhhhhcH
Confidence 0123344578999999999999998
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+...++.+.. ..+++++++++|+++ . ....+.+.+.+|+.
T Consensus 166 ~~~l~~~~~~---~~~~i~i~~a~HFF~-g----Kl~~l~~~i~~~l~ 205 (210)
T COG2945 166 VAVLKWQESI---KITVITIPGADHFFH-G----KLIELRDTIADFLE 205 (210)
T ss_pred HHHHHhhcCC---CCceEEecCCCceec-c----cHHHHHHHHHHHhh
Confidence 8877777653 578999999999999 2 24458888888884
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.87 E-value=7.6e-21 Score=149.86 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=145.0
Q ss_pred cCcccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 26 QGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
...+.+++.++..+++|..+.+.|...++.|+||++.|+.+.....+..+.+.|+++|+.++++|.||.|.|....-. .
T Consensus 161 ~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~ 239 (411)
T PF06500_consen 161 SDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-Q 239 (411)
T ss_dssp SSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S
T ss_pred CCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-c
Confidence 345567778888777888888888876788999999999877764666667789999999999999999998643321 1
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+. -..++++++.....+|..+|.++|.|+||++|.++|..++++ ++++|..+++...- ..............
T Consensus 240 D~~~---l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-lkavV~~Ga~vh~~--ft~~~~~~~~P~my 313 (411)
T PF06500_consen 240 DSSR---LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-LKAVVALGAPVHHF--FTDPEWQQRVPDMY 313 (411)
T ss_dssp -CCH---HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--SEEEEES---SCG--GH-HHHHTTS-HHH
T ss_pred CHHH---HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc-eeeEeeeCchHhhh--hccHHHHhcCCHHH
Confidence 2222 245677777777667788999999999999999999988888 99999999865321 00000000000000
Q ss_pred -hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcC--CCCCcCEEEEeeCCCccc
Q 020633 186 -FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
..+...... ....+............. ....+ .+..+|+|.+.+++|+++
T Consensus 314 ~d~LA~rlG~--------~~~~~~~l~~el~~~SLk-------------------~qGlL~~rr~~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 314 LDVLASRLGM--------AAVSDESLRGELNKFSLK-------------------TQGLLSGRRCPTPLLAINGEDDPVS 366 (411)
T ss_dssp HHHHHHHCT---------SCE-HHHHHHHGGGGSTT-------------------TTTTTTSS-BSS-EEEEEETT-SSS
T ss_pred HHHHHHHhCC--------ccCCHHHHHHHHHhcCcc-------------------hhccccCCCCCcceEEeecCCCCCC
Confidence 000000000 000000000000000000 01233 567899999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCC-cccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMY-HSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+..+.++..- .+.+...++... |..+ ++.+..+.+||++.+
T Consensus 367 P~eD~~lia~~s--~~gk~~~~~~~~~~~gy--------~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 367 PIEDSRLIAESS--TDGKALRIPSKPLHMGY--------PQALDEIYKWLEDKL 410 (411)
T ss_dssp -HHHHHHHHHTB--TT-EEEEE-SSSHHHHH--------HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcC--CCCceeecCCCccccch--------HHHHHHHHHHHHHhc
Confidence 999988777665 556777777544 5444 347889999998875
No 76
>PLN00021 chlorophyllase
Probab=99.87 E-value=3.9e-20 Score=144.94 Aligned_cols=208 Identities=13% Similarity=0.148 Sum_probs=139.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.+.+.++.|..++..|+|||+||++.+.. .|..+++.|+++||.|+++|++|++.+.. ...+ ++..+++++
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i----~d~~~~~~~ 108 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEI----KDAAAVINW 108 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhH----HHHHHHHHH
Confidence 67788888876577899999999998877 79999999999999999999998643311 1122 223333333
Q ss_pred HHhc--------CCCCCCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 121 VRDS--------EPYRDLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 121 l~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
+... ...+..+++++|||+||.+++.+|..+++. +++++|+++|..........
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~-------------- 174 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT-------------- 174 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC--------------
Confidence 3321 112346899999999999999999987742 28999999887543210000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc-----c--
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG-----V-- 261 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~-- 261 (323)
..... . ......++.+|+|+|.+..|. .
T Consensus 175 --------~p~il------------------~-------------------~~~~s~~~~~P~liig~g~~~~~~~~~~p 209 (313)
T PLN00021 175 --------PPPVL------------------T-------------------YAPHSFNLDIPVLVIGTGLGGEPRNPLFP 209 (313)
T ss_pred --------CCccc------------------c-------------------cCcccccCCCCeEEEecCCCccccccccc
Confidence 00000 0 111223468999999999763 2
Q ss_pred --cCchh-HHHHHHHcCCCCccEEEecCCCcccccCCC-------------------chhHHHHHHHHHHHHHHHHhh
Q 020633 262 --TCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEP-------------------DENANLVLKDMREWIDERVER 317 (323)
Q Consensus 262 --~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-------------------~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.|... ..++++.++ +.+.+.+++++||+-++++. +...+.+...+..||+..+..
T Consensus 210 ~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 210 PCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred ccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 23433 366777765 46788889999999997665 123455666788899887753
No 77
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.86 E-value=1e-20 Score=148.30 Aligned_cols=247 Identities=19% Similarity=0.207 Sum_probs=151.1
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcC-CCCC--
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGR-SDGI-- 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~-- 100 (323)
..+....+.+...+| +|+.+.+.|. ..++.|.||.+||.++... .+.... .++..||.|+.+|.||+|. +...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-Cccccc-ccccCCeEEEEecCCCCCCCCCCccc
Confidence 455666788888899 9999999998 4467899999999998765 454433 3678899999999999983 3210
Q ss_pred ------c----------ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 101 ------R----------CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ------~----------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
. ...+-+..+..|....++.+.....+|..+|.+.|.|+||.+++.+|+..+. |++++...|
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r--v~~~~~~vP 207 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR--VKAAAADVP 207 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST---SEEEEESE
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc--ccEEEecCC
Confidence 0 0001134456888899999998877888899999999999999999998765 999999888
Q ss_pred cccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh-cCCCCcCCCCchhHHHHHHHHHHHHHhc
Q 020633 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
+..-... ...... ...........+. .+... .......+.+...+ ....
T Consensus 208 ~l~d~~~---------~~~~~~----------------~~~~y~~~~~~~~~~d~~~----~~~~~v~~~L~Y~D-~~nf 257 (320)
T PF05448_consen 208 FLCDFRR---------ALELRA----------------DEGPYPEIRRYFRWRDPHH----EREPEVFETLSYFD-AVNF 257 (320)
T ss_dssp SSSSHHH---------HHHHT------------------STTTHHHHHHHHHHSCTH----CHHHHHHHHHHTT--HHHH
T ss_pred Cccchhh---------hhhcCC----------------ccccHHHHHHHHhccCCCc----ccHHHHHHHHhhhh-HHHH
Confidence 6542100 000000 0000001111111 00000 00001111111111 3456
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++|++|+++..|-.|.++|+......++.+.+ .+++.+++..||... .+ ...+...+||.++
T Consensus 258 A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~----~~---~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 258 ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYG----PE---FQEDKQLNFLKEH 320 (320)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTT----HH---HHHHHHHHHHHH-
T ss_pred HHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCch----hh---HHHHHHHHHHhcC
Confidence 788999999999999999999999999999864 489999999999877 33 1267788888764
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.86 E-value=3.3e-19 Score=139.24 Aligned_cols=205 Identities=18% Similarity=0.198 Sum_probs=124.3
Q ss_pred cEEEEEecCCC--CCcceEEEEecCCCCCccccHH---HHHHHHhhCCcEEEEecCCCCcCC-----C------CCc---
Q 020633 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ---KICISFATWGYAVFAADLLGHGRS-----D------GIR--- 101 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s-----~------~~~--- 101 (323)
.+.|.+|.|.. +.+.|+|+++||++++.. .|. .+.+.+...|+.|+.+|..++|.. . +..
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~ 109 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYL 109 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceee
Confidence 89999998863 246799999999987754 342 244566677999999998876621 0 000
Q ss_pred ----cc--CCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 102 ----CY--LGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ----~~--~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.. ... .....+++..+++..... .+..+++|+||||||..|+.++.++|+. +++++++++........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~~~~~~~~-- 184 (283)
T PLN02442 110 NATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDK-YKSVSAFAPIANPINCP-- 184 (283)
T ss_pred ccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchh-EEEEEEECCccCcccCc--
Confidence 00 001 112334444444443221 1256899999999999999999999998 99999999876532110
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
+....+ ... +.. ... .....++ ......+...++|++++
T Consensus 185 -~~~~~~----~~~------------~g~---~~~--~~~~~d~-------------------~~~~~~~~~~~~pvli~ 223 (283)
T PLN02442 185 -WGQKAF----TNY------------LGS---DKA--DWEEYDA-------------------TELVSKFNDVSATILID 223 (283)
T ss_pred -hhhHHH----HHH------------cCC---Chh--hHHHcCh-------------------hhhhhhccccCCCEEEE
Confidence 100000 000 000 000 0000000 00123344568999999
Q ss_pred eeCCCcccCch-hHHHHHHHcC--CCCccEEEecCCCcccc
Q 020633 255 HGTADGVTCPT-SSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 255 ~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
+|++|.+++.. ..+.+.+.+. +.+++++++++.+|...
T Consensus 224 ~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 224 QGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred ECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 99999998863 3445544442 24578999999999876
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.85 E-value=7.5e-20 Score=137.30 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=87.4
Q ss_pred EEecCCC-CCcceEEEEecCCCCCccccHH---HHHHHHhhCCcEEEEecCCCCcCCCCCcccC-----CChHHHhhcHH
Q 020633 45 QSFLPLD-QKVKATVYMTHGYGSDTGWMFQ---KICISFATWGYAVFAADLLGHGRSDGIRCYL-----GDMEKVAASSL 115 (323)
Q Consensus 45 ~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~ 115 (323)
++|.|.+ .++.|+||++||.+++.. .+. .+...+.+.||.|+++|++|++.+....... ........++.
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 4566654 256899999999997755 333 2445555679999999999987543211000 01123356778
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++++..+..++..+++|+|||+||.+++.++.++|+. +.+++.+++..
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDV-FAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchh-heEEEeecCCc
Confidence 888888887777778999999999999999999999998 89988877653
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.84 E-value=1.6e-19 Score=135.84 Aligned_cols=185 Identities=19% Similarity=0.218 Sum_probs=113.1
Q ss_pred CcceEEEEecCCCCCccccHHHHHH-HHhhCCcEEEEecCCC------CcC---CCC-----Ccc---cCCChHHHhhcH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICI-SFATWGYAVFAADLLG------HGR---SDG-----IRC---YLGDMEKVAASS 114 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~-----~~~---~~~~~~~~~~d~ 114 (323)
...++||++||+|.+.. .+..+.. .+......+++++-|. .|. +-- ... ....+...++.+
T Consensus 12 ~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp T-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 67899999999998875 5555544 2233357777776542 122 110 000 011234445566
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++|+..... .++..++++.|+|.||.+|+.++.++|.. +.++|++++..........
T Consensus 91 ~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~-~~gvv~lsG~~~~~~~~~~-------------------- 148 (216)
T PF02230_consen 91 DELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEP-LAGVVALSGYLPPESELED-------------------- 148 (216)
T ss_dssp HHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSST-SSEEEEES---TTGCCCHC--------------------
T ss_pred HHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcC-cCEEEEeeccccccccccc--------------------
Confidence 6677665433 35577999999999999999999999998 9999999976532211000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 274 (323)
...... ++|++++||++|+++|.+.++...+.+
T Consensus 149 ---------------------------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 149 ---------------------------------------------RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp ---------------------------------------------CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 001111 789999999999999999888888777
Q ss_pred CC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 275 SS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 275 ~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.. .+++++.+++.||... .+ ..+.+.+||++++
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~----~~----~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEIS----PE----ELRDLREFLEKHI 216 (216)
T ss_dssp HCTT-GEEEEEETT-SSS------HH----HHHHHHHHHHHH-
T ss_pred HhcCCCEEEEEcCCCCCCCC----HH----HHHHHHHHHhhhC
Confidence 42 3578999999999887 34 6788999998763
No 81
>PRK10162 acetyl esterase; Provisional
Probab=99.84 E-value=1.4e-18 Score=138.06 Aligned_cols=243 Identities=16% Similarity=0.232 Sum_probs=146.9
Q ss_pred ccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCC---CccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccC
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
..++..+...+|.+..+.|.|.. ...|+||++||++. +.. .+..++..|++ .|+.|+++|+|.....
T Consensus 56 ~~~~~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 56 ATRAYMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred eEEEEEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 34556677666788888898865 45789999999873 334 56778888877 4999999999964332
Q ss_pred CChHHHhhcHHHHHHHHHh---cCCCCCCCeEEEEechhHHHHHHHhhhc------CCCceeEEEEccCcccCCCCCchh
Q 020633 105 GDMEKVAASSLSFFKHVRD---SEPYRDLPGFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.+....+|+.++++++.. +.+++..+++|+|+|+||.+++.++... +.. +++++++.|..+.... ..
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~-~~~~vl~~p~~~~~~~--~s 202 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGK-VAGVLLWYGLYGLRDS--VS 202 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccC-hhheEEECCccCCCCC--hh
Confidence 222334566666665543 2334467999999999999999988753 244 8999999987664211 00
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.... ...+. ........ ..+..+..... .+.... ....+.+.-.|++
T Consensus 203 --~~~~-------~~~~~----------~l~~~~~~~~~~~y~~~~~~~~-~p~~~p----------~~~~l~~~lPp~~ 252 (318)
T PRK10162 203 --RRLL-------GGVWD----------GLTQQDLQMYEEAYLSNDADRE-SPYYCL----------FNNDLTRDVPPCF 252 (318)
T ss_pred --HHHh-------CCCcc----------ccCHHHHHHHHHHhCCCccccC-CcccCc----------chhhhhcCCCCeE
Confidence 0000 00000 00000000 00100000000 000000 0011211235999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|+.|++.+ ..+.+.+++. +..+++++++|..|.+....+ -...++..+.+.+||++.++
T Consensus 253 i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 253 IAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999999864 5566666663 345789999999998764322 24466788889999988764
No 82
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=4.6e-19 Score=139.14 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=137.6
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
.+.+...+.. .++|+++||++++.. .|......+... .|+++++|+||||.|. .. .......++++..++
T Consensus 11 ~~~~~~~~~~----~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~ 82 (282)
T COG0596 11 RLAYREAGGG----GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALL 82 (282)
T ss_pred EEEEeecCCC----CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHH
Confidence 4555555543 459999999998776 565532333332 1899999999999997 11 224455588888888
Q ss_pred HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh------h---HHHHHhhhh--hh
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS------K---LHLFMYGLL--FG 187 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~------~---~~~~~~~~~--~~ 187 (323)
+.+... +++++|||+||.+++.++.++|+. ++++|++++........... . ......... ..
T Consensus 83 ~~~~~~------~~~l~G~S~Gg~~~~~~~~~~p~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
T COG0596 83 DALGLE------KVVLVGHSMGGAVALALALRHPDR-VRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA 155 (282)
T ss_pred HHhCCC------ceEEEEecccHHHHHHHHHhcchh-hheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhh
Confidence 877644 699999999999999999999998 99999999765411000000 0 000000000 00
Q ss_pred hhcccccCC-ccccc-------ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCC
Q 020633 188 LADTWAAMP-DNKMV-------GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 188 ~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
......... ..... ......... ......................... ........+++|+++++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 156 FAALLAALGLLAALAAAARAGLAEALRAPLL-GAAAAAFARAARADLAAALLALLDR--DLRAALARITVPTLIIHGEDD 232 (282)
T ss_pred hhhhhhcccccccccccchhccccccccccc-hhHhhhhhhhcccccchhhhccccc--ccchhhccCCCCeEEEecCCC
Confidence 000000000 00000 000000000 0000000000000000000000000 122345667899999999999
Q ss_pred cccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.+.|......+.+.+.. ..++++++++||..++++|+. +.+.+.+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~----~~~~i~~~~ 279 (282)
T COG0596 233 PVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEA----FAAALLAFL 279 (282)
T ss_pred CcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHH----HHHHHHHHH
Confidence 66666555666666622 489999999999999877764 666666643
No 83
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=8.8e-18 Score=124.25 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=96.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
++..+||-+||.+|++. .|..+...|.+.|.++|.+++||+|.+++.....++-.+...-+.++++.+..+ .++
T Consensus 33 s~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-----~~~ 106 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-----GKL 106 (297)
T ss_pred CCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-----Cce
Confidence 56779999999999988 899999999999999999999999999988887788888889999999999885 389
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+++|||.||-.|+.++..+| ..++++++|.....
T Consensus 107 i~~gHSrGcenal~la~~~~---~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP---LHGLVLINPPGLRP 140 (297)
T ss_pred EEEEeccchHHHHHHHhcCc---cceEEEecCCcccc
Confidence 99999999999999999985 66999999876433
No 84
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.82 E-value=1.7e-18 Score=129.77 Aligned_cols=264 Identities=10% Similarity=0.082 Sum_probs=148.6
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHH-----HHHHhhCCcEEEEecCCCCcCCCC--Ccc-c
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISFATWGYAVFAADLLGHGRSDG--IRC-Y 103 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~~~-~ 103 (323)
++.+.+..|.|++..+|..+ +.+|++|-.|..|.+....|..+ ...+.++ |.++-+|.||+..... +.. .
T Consensus 1 eh~v~t~~G~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~ 78 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQ 78 (283)
T ss_dssp -EEEEETTEEEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT--
T ss_pred CceeccCceEEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccc
Confidence 35678888999999999876 57999999999998865345544 3455555 9999999999965432 222 2
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+++++++++..++++++.+ .++.+|-..|++|..++|..+|++ |.++||+++....... ..|....+..
T Consensus 79 yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~-V~GLiLvn~~~~~~gw--~Ew~~~K~~~ 149 (283)
T PF03096_consen 79 YPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPER-VLGLILVNPTCTAAGW--MEWFYQKLSS 149 (283)
T ss_dssp ---HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGG-EEEEEEES---S---H--HHHHHHHHH-
T ss_pred ccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccc-eeEEEEEecCCCCccH--HHHHHHHHhc
Confidence 458999999999999999987 699999999999999999999999 9999999987653321 1121111111
Q ss_pred hhhhhhcccccCCccccccccc------CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAI------KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
...... .+.......++...+ ......+.++...........+..+.+.+....++....+...||+|++.|+
T Consensus 150 ~~L~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~ 228 (283)
T PF03096_consen 150 WLLYSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGD 228 (283)
T ss_dssp -------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEET
T ss_pred cccccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEec
Confidence 000000 000000000000001 0111111111111111111112222222233344556667778999999999
Q ss_pred CCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+.. +.+.++..++.....++..+++||=.+..| .+.++.+.+.=||..
T Consensus 229 ~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eE----qP~klaea~~lFlQG 278 (283)
T PF03096_consen 229 NSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEE----QPGKLAEAFKLFLQG 278 (283)
T ss_dssp TSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-----HHHHHHHHHHHHHH
T ss_pred CCcch--hhHHHHHhhcCcccceEEEecccCCccccc----CcHHHHHHHHHHHcc
Confidence 98764 567788888876678899999999999944 445588888888864
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.82 E-value=5e-19 Score=151.06 Aligned_cols=130 Identities=20% Similarity=0.257 Sum_probs=104.6
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc--c-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--W-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
++.|| +|++..+.|.+.++.|+||++||++.+.. + ........|+++||.|+++|+||+|.|.+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 56789 99999999876567899999999986542 1 1123456788899999999999999998765432 2 5678
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+|+.++++++..+.. ...+++++|+|+||.+++.+|..+|+. ++++|..++..+..
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~-l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPA-LRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCc-eeEEeecCcccchh
Confidence 999999999987632 246999999999999999999998888 99999988776543
No 86
>PRK10115 protease 2; Provisional
Probab=99.81 E-value=8.3e-18 Score=145.77 Aligned_cols=252 Identities=12% Similarity=0.069 Sum_probs=161.2
Q ss_pred cCcccceeEEEcCCC-cEEE-EEecCCC--CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFT-QSFLPLD--QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~-~~~~~~~--~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
.....+++.+++.|| +|.+ .++.+.. .++.|+||++||..+.+ ...|......|+++||.|+.++.||-|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 345778888999999 9998 4554531 25679999999987654 23566666788899999999999987654321
Q ss_pred c---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 101 R---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
. .....-....+|+.+.+++|..+.-.++.++.+.|.|.||+++..++.++|++ ++++|+..|+.++...+...
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl-f~A~v~~vp~~D~~~~~~~~-- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL-FHGVIAQVPFVDVVTTMLDE-- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh-eeEEEecCCchhHhhhcccC--
Confidence 1 00001113457888888888877667788999999999999999999999999 99999999987743221000
Q ss_pred HHHHhhhhhhhhcccccCCcc-cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-EEEEe
Q 020633 178 HLFMYGLLFGLADTWAAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVH 255 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~ 255 (323)
........ ...+.. .++.....+. ... ....+.+++.| +|+++
T Consensus 569 -------------~~p~~~~~~~e~G~p-~~~~~~~~l~--------------------~~S-P~~~v~~~~~P~lLi~~ 613 (686)
T PRK10115 569 -------------SIPLTTGEFEEWGNP-QDPQYYEYMK--------------------SYS-PYDNVTAQAYPHLLVTT 613 (686)
T ss_pred -------------CCCCChhHHHHhCCC-CCHHHHHHHH--------------------HcC-chhccCccCCCceeEEe
Confidence 00000000 000000 0111111111 000 23445667889 56779
Q ss_pred eCCCcccCchhHHHHHHHcC--CCCccEEEe---cCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIY---DGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|.+|.-||+.++.++..++. +...+.+++ +++||... ..... .-+-......||-..+..
T Consensus 614 g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~-~~r~~-~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 614 GLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK-SGRFK-SYEGVAMEYAFLIALAQG 678 (686)
T ss_pred cCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC-cCHHH-HHHHHHHHHHHHHHHhCC
Confidence 99999999999999988874 234567777 89999954 21122 222233446677666543
No 87
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.80 E-value=6.3e-18 Score=124.74 Aligned_cols=267 Identities=10% Similarity=0.032 Sum_probs=169.2
Q ss_pred cceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHH-----HHHHhhCCcEEEEecCCCCcCCC--CCcc
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISFATWGYAVFAADLLGHGRSD--GIRC 102 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~--~~~~ 102 (323)
.+++.+.+..|.+++.++|..+ +++|++|-.|..|.++...|+.+ +..+..+ |.++.+|.||+-... -+.+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~-~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPK-GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccccEEEEEecCCC-CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 5788899999999999999987 47889999999998876446544 4456677 999999999995443 2222
Q ss_pred -cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 103 -YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 103 -~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
...+++++++++..+++++..+ .++-+|-..|++|..++|..||++ |-++||+++....... ..|...++
T Consensus 100 y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~r-V~GLvLIn~~~~a~gw--iew~~~K~ 170 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPER-VLGLVLINCDPCAKGW--IEWAYNKV 170 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhh-eeEEEEEecCCCCchH--HHHHHHHH
Confidence 2458999999999999999976 689999999999999999999999 9999999986653322 22222222
Q ss_pred hhhhhhhh---cccccCCccccccccc--CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC----CCCcCEE
Q 020633 182 YGLLFGLA---DTWAAMPDNKMVGKAI--KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS----KVTVPFL 252 (323)
Q Consensus 182 ~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~l 252 (323)
...+.... ...........++... .+....+.++...........+..+.+.+....++..... .++||+|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vl 250 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVL 250 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEE
Confidence 21111000 0000000000011100 0111112221111111111111111111111111222222 4569999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.|++.+.+ +.+.....++...+.++..+.++|-.+..++|.+ +.+.+.=|+..
T Consensus 251 lvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG 305 (326)
T KOG2931|consen 251 LVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQG 305 (326)
T ss_pred EEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHcc
Confidence 9999998775 4566677777656788999999999999667766 88888888764
No 88
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1e-17 Score=122.16 Aligned_cols=244 Identities=18% Similarity=0.169 Sum_probs=164.2
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCC----
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG---- 99 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---- 99 (323)
..++.-+.+++..+| +|..+...|... ++.|.||-.||.++... .|..+. .++..||.|+.+|.||.|.|..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecccCCCccccCCC
Confidence 345556678888899 999999999875 67899999999998766 565544 3456799999999999998842
Q ss_pred Cccc----------------CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 100 IRCY----------------LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 100 ~~~~----------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.+.. .+-+.....|+..+++.+..-..++.++|.+.|.|.||.+++.+++..|. +++++++-
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r--ik~~~~~~ 207 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR--IKAVVADY 207 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh--hhcccccc
Confidence 1110 11134455788888888888778889999999999999999998888776 99999998
Q ss_pred CcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhc
Q 020633 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|+.+....... ... .-...+....+...... -....+-+...+ ....
T Consensus 208 Pfl~df~r~i~-------------------~~~-------~~~ydei~~y~k~h~~~------e~~v~~TL~yfD-~~n~ 254 (321)
T COG3458 208 PFLSDFPRAIE-------------------LAT-------EGPYDEIQTYFKRHDPK------EAEVFETLSYFD-IVNL 254 (321)
T ss_pred cccccchhhee-------------------ecc-------cCcHHHHHHHHHhcCch------HHHHHHHHhhhh-hhhH
Confidence 87653211100 000 00001111111111110 011111111111 3455
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..++++|+|+..|-.|+++|+...-.+++++.. .+++.+++.-+|... |.- ..+.+..|+...
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~---p~~----~~~~~~~~l~~l 317 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG---PGF----QSRQQVHFLKIL 317 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC---cch----hHHHHHHHHHhh
Confidence 678899999999999999999999999999853 467778877678777 332 334566777654
No 89
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.78 E-value=1.2e-17 Score=118.93 Aligned_cols=259 Identities=17% Similarity=0.197 Sum_probs=153.0
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc--ccCCChHH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR--CYLGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~ 109 (323)
..+...|| .+....|...+ +....++.-.+.+.... +|+.++..++++||.|+.+|+||.|.|.... .....+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 56788899 99999887764 33334444444444344 8999999999999999999999999998543 22345666
Q ss_pred Hh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH--HHhhhhh
Q 020633 110 VA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--FMYGLLF 186 (323)
Q Consensus 110 ~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~--~~~~~~~ 186 (323)
++ .|+.+.+++++...+ ..+.+.+|||+||.+.-. +.+++. ..+....+........+....... .+.....
T Consensus 86 wA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL-~~~~~k--~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~ 160 (281)
T COG4757 86 WARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGL-LGQHPK--YAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVG 160 (281)
T ss_pred hhhcchHHHHHHHHhhCC--CCceEEeeccccceeecc-cccCcc--cceeeEeccccccccchhhhhcccceeeccccc
Confidence 65 799999999998544 668999999999997544 444452 444444444333332221111000 0000000
Q ss_pred hhhcccccCCcccccccc--cCChHHHH--HHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 187 GLADTWAAMPDNKMVGKA--IKDPEKLK--VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.....+.....+.+++.. ..-...++ ..-..+..+...+... ...+..+.+++|++.+...+|+.+
T Consensus 161 p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~----------~~~q~yaaVrtPi~~~~~~DD~w~ 230 (281)
T COG4757 161 PPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR----------NYRQVYAAVRTPITFSRALDDPWA 230 (281)
T ss_pred cchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHh----------HHHHHHHHhcCceeeeccCCCCcC
Confidence 000111111111111111 01111111 1111221111111111 134455678999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecC----CCcccccCCCchhHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDG----MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+...+.+.+...+...+...++. .||+..+.++ .|.+++.+++|+
T Consensus 231 P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~---~Ealwk~~L~w~ 280 (281)
T COG4757 231 PPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREP---FEALWKEMLGWF 280 (281)
T ss_pred CHHHHHHHHHhhhcCcccceecCcccCcccchhhhccc---hHHHHHHHHHhh
Confidence 999999888887555566666654 4899886554 245778888776
No 90
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=2.5e-17 Score=119.53 Aligned_cols=226 Identities=17% Similarity=0.197 Sum_probs=137.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH-HHhcCCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH-VRDSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-l~~~~~~~~~~ 131 (323)
..+..++++|-.|+++. .|+.+...|... ..++++.+||+|..-+.+.. .+++.+++.+...+.. .. ..+
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~~------d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPLL------DAP 75 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhccccC------CCC
Confidence 45778899998888888 899999988765 99999999999987544433 3788888777777663 22 458
Q ss_pred eEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCcccCCCCCc--hhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 132 GFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+.++||||||++|..+|.+.... .+.++.+.+.......... ....-..+...+..+.. .......+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG---------~p~e~led 146 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGG---------TPPELLED 146 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCC---------CChHHhcC
Confidence 99999999999999999874221 1455555443222111000 00001111111111100 00011112
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH-hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ-DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
++...++. ..++..+...+.+. ..-..++||+.++.|++|..+..+....+.+..+ ...++.+++|
T Consensus 147 ~El~~l~L------------PilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG 213 (244)
T COG3208 147 PELMALFL------------PILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG 213 (244)
T ss_pred HHHHHHHH------------HHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC
Confidence 21111110 01111111111111 1224689999999999999999999888888764 4689999996
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
||++. ....+++...|.+.+...
T Consensus 214 -gHFfl----~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 214 -GHFFL----NQQREEVLARLEQHLAHH 236 (244)
T ss_pred -cceeh----hhhHHHHHHHHHHHhhhh
Confidence 89999 444555777777766543
No 91
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=2e-17 Score=127.13 Aligned_cols=258 Identities=12% Similarity=0.128 Sum_probs=154.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc--c--------cHHHHHH---HHhhCCcEEEEecCCCCc-CCCCC----cc
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--W--------MFQKICI---SFATWGYAVFAADLLGHG-RSDGI----RC 102 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~--------~~~~~~~---~l~~~g~~v~~~d~~G~G-~s~~~----~~ 102 (323)
+|.|..||..+.....+||++|++.+++. . .|+.++. .+....|.||+.|..|.+ .|+++ +.
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~ 116 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG 116 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC
Confidence 89999999887666789999999988542 0 2333321 233334999999999986 33322 11
Q ss_pred --------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc
Q 020633 103 --------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 103 --------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~ 173 (323)
...++.+++.--..++++|+.+ ++. |+|-||||+.|+.++..+|++ |+.+|.+++........
T Consensus 117 g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~------~l~avvGgSmGGMqaleWa~~yPd~-V~~~i~ia~~~r~s~~~- 188 (368)
T COG2021 117 GKPYGSDFPVITIRDMVRAQRLLLDALGIK------KLAAVVGGSMGGMQALEWAIRYPDR-VRRAIPIATAARLSAQN- 188 (368)
T ss_pred CCccccCCCcccHHHHHHHHHHHHHhcCcc------eEeeeeccChHHHHHHHHHHhChHH-HhhhheecccccCCHHH-
Confidence 2236677777777788888876 555 999999999999999999999 99999888755433211
Q ss_pred hhhHHHHHhhhhhhhhccc--------------------------------ccCCcccccccccC----ChHHHHHHhcC
Q 020633 174 PSKLHLFMYGLLFGLADTW--------------------------------AAMPDNKMVGKAIK----DPEKLKVIASN 217 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~ 217 (323)
..+.......-..-+.| .....+........ .......+...
T Consensus 189 --ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~q 266 (368)
T COG2021 189 --IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQ 266 (368)
T ss_pred --HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHH
Confidence 11111111110001111 00000000000000 01111222222
Q ss_pred CCCcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe-cCC
Q 020633 218 PRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY-DGM 287 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 287 (323)
-.++..+.....+..+.+..+ ++...++++++|+|++.-+.|..+|++..+.+.+.+..... ++++ ...
T Consensus 267 g~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~ 345 (368)
T COG2021 267 GDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPY 345 (368)
T ss_pred HHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCC
Confidence 222222222222333333222 23345788999999999999999999999999999943332 6555 467
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHH
Q 020633 288 YHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||..++.+.+. +...|..||+.
T Consensus 346 GHDaFL~e~~~----~~~~i~~fL~~ 367 (368)
T COG2021 346 GHDAFLVESEA----VGPLIRKFLAL 367 (368)
T ss_pred Cchhhhcchhh----hhHHHHHHhhc
Confidence 99998654443 66788888763
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.77 E-value=1.7e-17 Score=120.78 Aligned_cols=180 Identities=16% Similarity=0.157 Sum_probs=125.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC--cCCC---CCcccCC---ChHHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH--GRSD---GIRCYLG---DMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~---~~~~~~~---~~~~~~~d~~~~l~~l~~~ 124 (323)
...|+||++||+|++.. .+-.+.+.+..+ +.++.+.-+-- |.-. ......+ ++..-.+.+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~-~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDEL-DLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChh-hhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 55678999999998765 565666666555 66666532210 1000 0001111 2333345566677777777
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
++++..+++++|+|.||++++.+..++|.. ++++|+.++........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~-~~~ail~~g~~~~~~~~-------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGL-FAGAILFSGMLPLEPEL-------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchh-hccchhcCCcCCCCCcc--------------------------------
Confidence 777788999999999999999999999998 99999999876533110
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEE
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIK 282 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 282 (323)
.-..-..|+++++|+.|+++|...+.++.+.+. +.+++..
T Consensus 141 --------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 141 --------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred --------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 001126799999999999999988888777763 3567788
Q ss_pred EecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++ .||... .+ ..+.+.+|+.+.
T Consensus 183 ~~~-~GH~i~----~e----~~~~~~~wl~~~ 205 (207)
T COG0400 183 WHE-GGHEIP----PE----ELEAARSWLANT 205 (207)
T ss_pred Eec-CCCcCC----HH----HHHHHHHHHHhc
Confidence 888 799988 44 566777788765
No 93
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.77 E-value=3.8e-17 Score=117.45 Aligned_cols=230 Identities=14% Similarity=0.139 Sum_probs=128.7
Q ss_pred eeEEEcCCC-cEEEEEecCCCC--CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccCCCh
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~ 107 (323)
++.+...+| +|+.+.-.|.+. ..+++||+..|++.... .|..++.+|+..||+|+.+|.-.| |.|++.... .++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cch
Confidence 566778899 999999988764 34589999999998777 899999999999999999999988 999887554 388
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh-hhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG-LLF 186 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (323)
.....++..+++++.... ..++.|+.-|+.|-+|+..|.+- + +.-+|..-+...+...... .+.. .+.
T Consensus 82 s~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~i-~--lsfLitaVGVVnlr~TLe~-----al~~Dyl~ 150 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAADI-N--LSFLITAVGVVNLRDTLEK-----ALGYDYLQ 150 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTTS-----SEEEEES--S-HHHHHHH-----HHSS-GGG
T ss_pred HHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhcc-C--cceEEEEeeeeeHHHHHHH-----Hhccchhh
Confidence 889999999999999543 56799999999999999999853 3 7777776665543211100 0000 000
Q ss_pred hhhcccccCCccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 187 GLADTWAAMPDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
......+. ...+.+... .+.+..+.++...... +.....++.+++|++.+++.+|.+|...
T Consensus 151 ~~i~~lp~--dldfeGh~l~~~vFv~dc~e~~w~~l----------------~ST~~~~k~l~iP~iaF~A~~D~WV~q~ 212 (294)
T PF02273_consen 151 LPIEQLPE--DLDFEGHNLGAEVFVTDCFEHGWDDL----------------DSTINDMKRLSIPFIAFTANDDDWVKQS 212 (294)
T ss_dssp S-GGG--S--EEEETTEEEEHHHHHHHHHHTT-SSH----------------HHHHHHHTT--S-EEEEEETT-TTS-HH
T ss_pred cchhhCCC--cccccccccchHHHHHHHHHcCCccc----------------hhHHHHHhhCCCCEEEEEeCCCccccHH
Confidence 00000000 000111111 1122333333332211 1134567788999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
.+.++...+.+..++++.++|++|.+.
T Consensus 213 eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 213 EVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999888778889999999999988
No 94
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.76 E-value=8.5e-17 Score=132.23 Aligned_cols=259 Identities=12% Similarity=0.068 Sum_probs=156.7
Q ss_pred ccCcccceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccH-----HHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 25 SQGVRNGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMF-----QKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
...+..+...+...++.+..+.|.|... .-+.+||+++.+- +..+.+ +.++++|.++||.|+.+|+++-+...
T Consensus 184 G~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~ 262 (560)
T TIGR01839 184 GKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH 262 (560)
T ss_pred CCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhh-hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh
Confidence 4455556666666666556666766532 4568999999986 333244 57899999999999999999876553
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHH----HhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATML----MYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
. ..+++++++.+.+.++.+....+ ..++.++|+|+||.+++. +++++++.+|++++++.+..++......
T Consensus 263 r----~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l 336 (560)
T TIGR01839 263 R----EWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPA 336 (560)
T ss_pred c----CCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcc
Confidence 2 24889999999999999987765 668999999999999986 7778886239999999888776542211
Q ss_pred hh-----HHHHHhhhh--hhhhcc------cccCCccccccc-----c-c-CChHH--HHHHhcCCCCcCCCCchhHHHH
Q 020633 175 SK-----LHLFMYGLL--FGLADT------WAAMPDNKMVGK-----A-I-KDPEK--LKVIASNPRRYTGKPRVGTMRE 232 (323)
Q Consensus 175 ~~-----~~~~~~~~~--~~~~~~------~~~~~~~~~~~~-----~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
.. ......... ....+. +.......++.. . . ..+.. ...+..+...+.. ....+
T Consensus 337 ~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg----~~~~e 412 (560)
T TIGR01839 337 ALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPA----AFHGD 412 (560)
T ss_pred hhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchH----HHHHH
Confidence 11 010000000 000100 000000000000 0 0 00000 1111111111111 11122
Q ss_pred HHHHH--HHHH-----------hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCC
Q 020633 233 IARVC--QYIQ-----------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 233 ~~~~~--~~~~-----------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 296 (323)
+.... +.+. -.+++|+||++++.|+.|.++|++.+....+.+.+ +++++..+ +||..-+-.|
T Consensus 413 ~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIggivnp 487 (560)
T TIGR01839 413 LLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQSILNP 487 (560)
T ss_pred HHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCccccccCC
Confidence 22111 0011 23678999999999999999999999999998865 57777776 5887654433
No 95
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.76 E-value=4.6e-18 Score=104.08 Aligned_cols=78 Identities=36% Similarity=0.634 Sum_probs=71.8
Q ss_pred C-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 40 G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 40 g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
| +|+++.|.|.++ ++.+|+++||++.++. .|..+++.|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 5 799999999873 7999999999998888 899999999999999999999999999988888889999999999887
Q ss_pred H
Q 020633 119 K 119 (323)
Q Consensus 119 ~ 119 (323)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.76 E-value=1.6e-16 Score=120.50 Aligned_cols=254 Identities=15% Similarity=0.166 Sum_probs=100.5
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHhhcHHH
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
....+.+....+...||||.|++... -.+...+++.|.+.||.|+-+-++ |+|.+ ++++-++|+.+
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~ 92 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQ 92 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHH
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHH
Confidence 33444443323577999999997542 226788999997779999999876 44433 78888999999
Q ss_pred HHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcCC----CceeEEEEccCcccCCCCCchhhH---HHHHhhhhhh
Q 020633 117 FFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKPSKL---HLFMYGLLFG 187 (323)
Q Consensus 117 ~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~vl~~~~~~~~~~~~~~~~---~~~~~~~~~~ 187 (323)
++++++...+. ...+|+|+|||-|+.-+++|+..... ..|+++|+-+|..+.......... ..........
T Consensus 93 ~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~ 172 (303)
T PF08538_consen 93 LVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKE 172 (303)
T ss_dssp HHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHH
T ss_pred HHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHH
Confidence 99999987421 25689999999999999999987532 339999999998765443332211 2222222222
Q ss_pred hhcc-c--ccCCccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH---HHHHhcCCCCCcCEEEEeeCCCc
Q 020633 188 LADT-W--AAMPDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVC---QYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 188 ~~~~-~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
.... . ...+. ....... ..+.....+.... ......+++... +.+...+.++++|+|++.+++|.
T Consensus 173 ~i~~g~~~~~lp~-~~~~~~~~~~PiTA~Rf~SL~-------s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 173 LIAEGKGDEILPR-EFTPLVFYDTPITAYRFLSLA-------SPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHCT-TT-GG-----GGTTT-SS---HHHHHT-S--------SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHcCCCCceeec-cccccccCCCcccHHHHHhcc-------CCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 1110 0 00000 0000000 1111111111000 001111222111 34567788999999999999999
Q ss_pred ccCchh-HHHHHHHcC---CC---CccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 261 VTCPTS-SKLLYEKAS---SA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~-~~~~~~~~~---~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+|... .+.+.+++. .+ ...-.+++|++|.+--...++..+.+.+.+..||+
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 998643 223333331 11 12245889999999833333345678888888874
No 97
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.72 E-value=1e-16 Score=125.03 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=98.4
Q ss_pred CC-cEEEEEecC--CCCCcceEEEEecCCCCCccccHHHH---------HHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 39 NG-KLFTQSFLP--LDQKVKATVYMTHGYGSDTGWMFQKI---------CISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 39 ~g-~l~~~~~~~--~~~~~~~~vv~~HG~~~~~~~~~~~~---------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
|| +|...+|.| ...++.|+||..|+++.......... ...|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 78 999999999 55578899999999986431011111 12388999999999999999999876542
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
.....+|..++|+++..+ ++.+.+|.++|.|++|..++.+|...|.. +++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~-LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPH-LKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TT-EEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCC-ceEEEecccCCcccc
Confidence 566789999999999988 66677999999999999999999987777 999999888776655
No 98
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.71 E-value=7.3e-16 Score=123.21 Aligned_cols=249 Identities=10% Similarity=0.032 Sum_probs=148.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.|+||++..+.++.....+.+++.|.. |+.|+..|+..-+..+..... .+++++++-+.+++++++ . ++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G------~-~v~l 172 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLG------P-DIHV 172 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhC------C-CCcE
Confidence 379999999886654355788899988 999999999877755322222 388999988888887773 2 4899
Q ss_pred EEechhHHHHHHHhhhc-----CCCceeEEEEccCcccCCCCCchhhHH------HHHhhhhhh------------hhcc
Q 020633 135 FGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLH------LFMYGLLFG------------LADT 191 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~~~ 191 (323)
+|+|+||..++.+++.. |.+ ++.+++++++.+..........+ ..+...... ..+.
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~-~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQ-PRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCC-cceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 99999999977666554 556 99999999888765431111100 001111100 0110
Q ss_pred ccc-------CCcc------ccccccc-CC-hH---HHHHHh--cCCCCcCCCCchhHHHHHHHHHHHH---------Hh
Q 020633 192 WAA-------MPDN------KMVGKAI-KD-PE---KLKVIA--SNPRRYTGKPRVGTMREIARVCQYI---------QD 242 (323)
Q Consensus 192 ~~~-------~~~~------~~~~~~~-~~-~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 242 (323)
+.. .+.+ .+..... .+ +. ...+.. .+...+.......+...++....-. .-
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 000 0000 0000000 00 00 000111 1111111111111111111111100 12
Q ss_pred cCCCCC-cCEEEEeeCCCcccCchhHHHHHHHc---CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+++|+ +|+|.|.|++|.++|++++..+.+.+ .+.+.+.++.+++||...+.-. ...++++..|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-RFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh-hhhhhhchHHHHHHHhC
Confidence 357888 99999999999999999999888874 4456667888889999986544 56788999999999763
No 99
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.71 E-value=5.2e-16 Score=110.28 Aligned_cols=196 Identities=15% Similarity=0.160 Sum_probs=141.1
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC-CCcCCCCCcc-------cCCChHHHhhc
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL-GHGRSDGIRC-------YLGDMEKVAAS 113 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~-------~~~~~~~~~~d 113 (323)
|..+..+... ++..||++--+.+.....-+..+..++.+||.|+.+|+- |--.+..... ...+.+....+
T Consensus 28 ldaYv~gs~~--~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~ 105 (242)
T KOG3043|consen 28 LDAYVVGSTS--SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKD 105 (242)
T ss_pred eeEEEecCCC--CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhH
Confidence 5555566553 235666666665554424677889999999999999975 3222221110 11245556688
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+..++++++.... ..+|.++|++|||.++..+....+. +.++++.-|....
T Consensus 106 i~~v~k~lk~~g~--~kkIGv~GfCwGak~vv~~~~~~~~--f~a~v~~hps~~d------------------------- 156 (242)
T KOG3043|consen 106 ITAVVKWLKNHGD--SKKIGVVGFCWGAKVVVTLSAKDPE--FDAGVSFHPSFVD------------------------- 156 (242)
T ss_pred HHHHHHHHHHcCC--cceeeEEEEeecceEEEEeeccchh--heeeeEecCCcCC-------------------------
Confidence 9999999997754 6789999999999999988888774 7888777654321
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.+...++++|+|++.|+.|.++|++....+.+.
T Consensus 157 -----------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~ 189 (242)
T KOG3043|consen 157 -----------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEK 189 (242)
T ss_pred -----------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHH
Confidence 134466789999999999999999988888877
Q ss_pred cCCC---CccEEEecCCCccccc-----CCCc--hhHHHHHHHHHHHHHHHH
Q 020633 274 ASSA---DKSIKIYDGMYHSLIQ-----GEPD--ENANLVLKDMREWIDERV 315 (323)
Q Consensus 274 ~~~~---~~~~~~~~~~gH~~~~-----~~~~--~~~~~~~~~i~~fl~~~~ 315 (323)
+... +.++.++++.+|.+.. ..|+ ...++..+.+..||+.++
T Consensus 190 lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 190 LKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 7421 2469999999998873 2333 467888899999998775
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.70 E-value=3.9e-16 Score=111.31 Aligned_cols=153 Identities=18% Similarity=0.165 Sum_probs=97.9
Q ss_pred EEEecCCCCCccccHHH-HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 58 VYMTHGYGSDTGWMFQK-ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
|+++||++++....|.. +.+.|... ++|-..++- ..+.+++...+.+.+..+ ..++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-----------~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-----------NPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-----------S--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-----------CCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 68999999886545655 55566555 777766651 126677766666666543 33699999
Q ss_pred echhHHHHHHHh-hhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh
Q 020633 137 ESMGGAATMLMY-FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 137 ~S~Gg~~a~~~a-~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
||+|+..+++++ .....+ |++++|++|+......... . .....
T Consensus 62 HSLGc~~~l~~l~~~~~~~-v~g~lLVAp~~~~~~~~~~---------------------~---~~~~f----------- 105 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKK-VAGALLVAPFDPDDPEPFP---------------------P---ELDGF----------- 105 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSS-EEEEEEES--SCGCHHCCT---------------------C---GGCCC-----------
T ss_pred eCHHHHHHHHHHhhccccc-ccEEEEEcCCCcccccchh---------------------h---hcccc-----------
Confidence 999999999999 555555 9999999987532000000 0 00000
Q ss_pred cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
.......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..
T Consensus 106 ------------------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 106 ------------------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNA 155 (171)
T ss_dssp ------------------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSG
T ss_pred ------------------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccc
Confidence 00111234667899999999999999999999998 689999999999987
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.70 E-value=3.9e-15 Score=118.81 Aligned_cols=290 Identities=14% Similarity=0.086 Sum_probs=174.5
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEecCCC
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~d~~G 93 (323)
+.....+.+.|++.+.+.|| -|......... +++|+|++.||+-+++. .| +.++-.|+++||+|..-+.||
T Consensus 39 ~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 39 EIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHHHHcCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcC
Confidence 44567789999999999999 55555444443 77999999999987765 34 346667889999999999999
Q ss_pred CcCCCCCc---------ccCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC--CceeEEEE
Q 020633 94 HGRSDGIR---------CYLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP--NTWTGLIF 161 (323)
Q Consensus 94 ~G~s~~~~---------~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~vl 161 (323)
-..|.... -...++++++ .|+-+.|+++....+ ..+++.+|||.|+.+...++...|+ .+|+..++
T Consensus 117 n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 87776211 1123666755 799999999988754 6799999999999999998888765 23999999
Q ss_pred ccCcccCCCCCchhhHH-HHH---hhhhhhhhcccccCCccc----ccccccCCh-HH----------------HHHHhc
Q 020633 162 SAPLFVIPENMKPSKLH-LFM---YGLLFGLADTWAAMPDNK----MVGKAIKDP-EK----------------LKVIAS 216 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~----------------~~~~~~ 216 (323)
++|.............. ... ...+..+.......+... +........ .. ..+...
T Consensus 195 LAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~ 274 (403)
T KOG2624|consen 195 LAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTT 274 (403)
T ss_pred ecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhc
Confidence 99987544211111100 000 001111111111111110 000000000 00 000000
Q ss_pred C-CCCcCCCCchhHHHHHHHHHH-------------------------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 217 N-PRRYTGKPRVGTMREIARVCQ-------------------------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 217 ~-~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
. +..+...+.......+..... ...-.+.++++|+.+.+|++|.++.++.+..+
T Consensus 275 ~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~ 354 (403)
T KOG2624|consen 275 LLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLIL 354 (403)
T ss_pred ccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHH
Confidence 0 000111111111111111111 01123567799999999999999999999988
Q ss_pred HHHcCCCCccEEE-ecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 271 YEKASSADKSIKI-YDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 271 ~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
...+........+ +++-.|.-++- .....+.+.+.|.+.++...
T Consensus 355 ~~~~~~~~~~~~~~~~~ynHlDFi~-g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 355 LLVLPNSVIKYIVPIPEYNHLDFIW-GLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHhcccccccccccCCCccceeeee-ccCcHHHHHHHHHHHHHhhh
Confidence 8777322222222 78888987743 33457778888888887654
No 102
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.68 E-value=9.9e-15 Score=108.80 Aligned_cols=203 Identities=15% Similarity=0.186 Sum_probs=131.8
Q ss_pred EEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 45 QSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 45 ~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
.++.|...+..|+|||+||+..... .|..+.++++++||.|+++|+...+.. .-...++++.++++|+...
T Consensus 7 ~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 7 LVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred EEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 4556666677899999999996666 699999999999999999997654321 1122234445555554332
Q ss_pred C--------CCCCCCeEEEEechhHHHHHHHhhhc-----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 125 E--------PYRDLPGFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 125 ~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
. ..|-.++.|.|||-||-+|..++..+ ..+ ++++++++|.-.........
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~-~~ali~lDPVdG~~~~~~~~---------------- 140 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLR-FSALILLDPVDGMSKGSQTE---------------- 140 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccc-eeEEEEeccccccccccCCC----------------
Confidence 1 12456899999999999999998886 345 99999999986432211000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc---------cc
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG---------VT 262 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~~ 262 (323)
...+. .....-+..+|+++|-..-+. ..
T Consensus 141 ------P~v~~-------------------------------------~~p~s~~~~~P~lviGtGLg~~~~~~~~~~Ca 177 (259)
T PF12740_consen 141 ------PPVLT-------------------------------------YTPQSFDFSMPALVIGTGLGGEPRNPLFPPCA 177 (259)
T ss_pred ------Ccccc-------------------------------------CcccccCCCCCeEEEecccCcccccccCCCCC
Confidence 00000 001122346899999777664 22
Q ss_pred Cc-hhHHHHHHHcCCCCccEEEecCCCcccccCCCc---------------------hhHHHHHHHHHHHHHHHHhh
Q 020633 263 CP-TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD---------------------ENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---------------------~~~~~~~~~i~~fl~~~~~~ 317 (323)
|. ..-+++++.+..+ .-..+..+.||+-+++... ..++-+...+..|++..+..
T Consensus 178 P~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g 253 (259)
T PF12740_consen 178 PAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQG 253 (259)
T ss_pred CCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 32 2456777877543 5556668899999987661 23344555667787777653
No 103
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=1e-15 Score=123.76 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=85.2
Q ss_pred cceEEEEecCCCCCcc-ccHHH-HHHHHhh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 54 VKATVYMTHGYGSDTG-WMFQK-ICISFAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~-~~~~~-~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
.+|++|++||++++.. ..|.. +...|.. ..|+|+++|++|+|.+...... ......++++.++++.+....+.+.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4789999999986532 13443 5555542 2599999999999988644322 2456777889999998865433335
Q ss_pred CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+++|+||||||.+|..++...|++ |.++++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~r-V~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHK-VNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcc-eeEEEEEcCCCC
Confidence 6899999999999999999988988 999999998754
No 104
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=4.4e-16 Score=120.69 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=87.9
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccH-HHHHHHHh-hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-QKICISFA-TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
.+....+.+. +|++|++||++++....| ..+.+.+. ..+|.|+++|+++++.+.. .....+.....+++..++
T Consensus 26 ~~~~~~f~~~----~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~a~~~~~~v~~~la~~l 100 (275)
T cd00707 26 SLKNSNFNPS----RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-PQAVNNTRVVGAELAKFL 100 (275)
T ss_pred hhhhcCCCCC----CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-HHHHHhHHHHHHHHHHHH
Confidence 5555545443 689999999998762244 34555444 4579999999998843321 111124566678888888
Q ss_pred HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+.+....+.+..+++++||||||.+|..++..++++ |+++++++|...
T Consensus 101 ~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~-v~~iv~LDPa~p 148 (275)
T cd00707 101 DFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGK-LGRITGLDPAGP 148 (275)
T ss_pred HHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCc-cceeEEecCCcc
Confidence 888765333356899999999999999999999987 999999998754
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.66 E-value=5.1e-14 Score=94.50 Aligned_cols=187 Identities=15% Similarity=0.183 Sum_probs=123.1
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCC----CCcccCCC-hHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSD----GIRCYLGD-MEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~----~~~~~~~~-~~~~~~d~~~~l~~l~~~~~ 126 (323)
....+||+-||.|.+.+ ......+..|+.+|+.|..++++..-... .++....+ -..++..+.++-+.+.
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~---- 87 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA---- 87 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc----
Confidence 44568999999986632 26778899999999999999998653322 11111112 2333333333333322
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
..++++-|+||||-++.+++...... |+++++++-+...+.....
T Consensus 88 --~gpLi~GGkSmGGR~aSmvade~~A~-i~~L~clgYPfhppGKPe~-------------------------------- 132 (213)
T COG3571 88 --EGPLIIGGKSMGGRVASMVADELQAP-IDGLVCLGYPFHPPGKPEQ-------------------------------- 132 (213)
T ss_pred --CCceeeccccccchHHHHHHHhhcCC-cceEEEecCccCCCCCccc--------------------------------
Confidence 55899999999999999998876655 9999998754332221100
Q ss_pred ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
. ..+.+..+++|+|+.+|+.|++-..+.+ ....-++..+++++++
T Consensus 133 --------------~------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~ls~~iev~wl~~ 177 (213)
T COG3571 133 --------------L------------------RTEHLTGLKTPTLITQGTRDEFGTRDEV---AGYALSDPIEVVWLED 177 (213)
T ss_pred --------------c------------------hhhhccCCCCCeEEeecccccccCHHHH---HhhhcCCceEEEEecc
Confidence 0 1356788999999999999998766555 2222346789999999
Q ss_pred CCcccccCC------CchhHHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGE------PDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH~~~~~~------~~~~~~~~~~~i~~fl~~ 313 (323)
+.|.+--.+ .+.......+.|..|+.+
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999875111 112344456667777654
No 106
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.65 E-value=7.7e-14 Score=111.41 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=136.3
Q ss_pred cCCC-cEEEEEecC--CCCCcceEEEEecCCCCC---ccccH-HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 37 TPNG-KLFTQSFLP--LDQKVKATVYMTHGYGSD---TGWMF-QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 37 ~~~g-~l~~~~~~~--~~~~~~~~vv~~HG~~~~---~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
...+ .+.++.|.| ....+.|+||++||++.. .. .. ..+...+...|+.|+++|||-..+ ..+..
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe--------~~~p~ 128 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPE--------HPFPA 128 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCC--------CCCCc
Confidence 3444 588888988 333458999999999743 23 33 344555566799999999994322 24555
Q ss_pred HhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 110 VAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.++|+.+.++++... .+.+..+|+|+|+|.||.+++.++..-.++ ...+.+++.|..+... ........
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~---- 203 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGY---- 203 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhc----
Confidence 667777777776654 345678999999999999999988774421 2789999999877654 11100000
Q ss_pred hhhhhhcccccCCcccccccccCChHHH-HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.. .......... ............... .....+ ....+.. -.|+++++|+.|.+.
T Consensus 204 ------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~spl------~~~~~~~-lPP~~i~~a~~D~l~ 259 (312)
T COG0657 204 ------------GE----ADLLDAAAILAWFADLYLGAAPDRED-PEASPL------ASDDLSG-LPPTLIQTAEFDPLR 259 (312)
T ss_pred ------------CC----ccccCHHHHHHHHHHHhCcCccccCC-CccCcc------ccccccC-CCCEEEEecCCCcch
Confidence 00 0000000000 000000000000000 000000 0111333 458999999999998
Q ss_pred CchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ ..+.+.+++. +..++++.+++..|.+..... ....+....+.+|+.
T Consensus 260 ~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~ 308 (312)
T COG0657 260 D--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQIAAFLR 308 (312)
T ss_pred h--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHHHHHHH
Confidence 7 5555555553 345688999999997753333 334444667777776
No 107
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.64 E-value=1.1e-14 Score=112.25 Aligned_cols=114 Identities=11% Similarity=0.145 Sum_probs=93.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhC---CcEEEEecCCCCcCCCCC-----cccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATW---GYAVFAADLLGHGRSDGI-----RCYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
+..+|+|+|.+|-.+ +|..+.+.|.+. .+.|+++.+.||-.++.. ....+++++.++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 578999999999988 899988888743 699999999999777654 34567899999999999998887531
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcC---CCceeEEEEccCcccCCC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~~~~ 170 (323)
....+++++|||.|+++++.++.+.+ .+ |++++++-|....-.
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~-V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFR-VKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCc-eeEEEEeCCcccccc
Confidence 12669999999999999999999988 44 999999988765433
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.63 E-value=4.5e-14 Score=101.75 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=105.0
Q ss_pred EEEecCCCCCccc-cHHHHHHHHhhCC--cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 58 VYMTHGYGSDTGW-MFQKICISFATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 58 vv~~HG~~~~~~~-~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
||++||+.++... -...+.+.+.+.+ ..+.++|++ ...+...+.+.++++.... ..++|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~------~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKP------ENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCC------CCeEE
Confidence 7999999877541 2344556666554 456666665 1455556667777766643 35999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||..|..++.+++- ++ |+++|...+.... ...+.... .. .....+
T Consensus 64 iGSSlGG~~A~~La~~~~~---~a-vLiNPav~p~~~l---------~~~iG~~~---~~-----~~~e~~--------- 113 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYGL---PA-VLINPAVRPYELL---------QDYIGEQT---NP-----YTGESY--------- 113 (187)
T ss_pred EEEChHHHHHHHHHHHhCC---CE-EEEcCCCCHHHHH---------HHhhCccc---cC-----CCCccc---------
Confidence 9999999999999998864 44 8889876532111 00000000 00 000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
............+......-..+++++.++.|.+++...+. +.. .+...++.+|++|.+.
T Consensus 114 -------------~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~--~~~~~~i~~ggdH~f~-- 173 (187)
T PF05728_consen 114 -------------ELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAV---AKY--RGCAQIIEEGGDHSFQ-- 173 (187)
T ss_pred -------------eechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHH---HHh--cCceEEEEeCCCCCCc--
Confidence 00000000000001111223568999999999999985443 333 3445566788899887
Q ss_pred CCchhHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWI 311 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl 311 (323)
..++....|.+|+
T Consensus 174 ----~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 174 ----DFEEYLPQIIAFL 186 (187)
T ss_pred ----cHHHHHHHHHHhh
Confidence 2445777888876
No 109
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.63 E-value=4.1e-14 Score=108.13 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=80.3
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
++|+|+|+.+++.. .|..+++.|....+.|+.++.+|.+... ....++++++++..+.|.....+ +++.|+
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~~-----gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQPE-----GPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTSS-----SSEEEE
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCCC-----CCeeeh
Confidence 47999999999877 8999999997645899999999998322 22248899998888877766543 389999
Q ss_pred EechhHHHHHHHhhhc---CCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQS---EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~ 167 (323)
|||+||.+|+.+|.+. ... +..++++++...
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~-v~~l~liD~~~p 105 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEE-VSRLILIDSPPP 105 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-S-ESEEEEESCSST
T ss_pred ccCccHHHHHHHHHHHHHhhhc-cCceEEecCCCC
Confidence 9999999999999863 233 889999986543
No 110
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.63 E-value=2.2e-15 Score=117.26 Aligned_cols=140 Identities=20% Similarity=0.185 Sum_probs=92.2
Q ss_pred cccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccc-----------------cHHHHHHHHhhCCc
Q 020633 24 TSQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW-----------------MFQKICISFATWGY 84 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~-----------------~~~~~~~~l~~~g~ 84 (323)
...+...+...|.+..+ .+..++..|.+ .++-|.||++||-++.... .-..++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 35677888888888888 99999999887 5788999999997754310 01236788999999
Q ss_pred EEEEecCCCCcCCCCCcccC----CChHHH---------------hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH
Q 020633 85 AVFAADLLGHGRSDGIRCYL----GDMEKV---------------AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM 145 (323)
Q Consensus 85 ~v~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 145 (323)
.|+++|.+|+|+........ ++.+.+ +-|...++++|.....+++++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 99999999999986432111 111121 23445688889888888889999999999999999
Q ss_pred HHhhhcCCCceeEEEEccCc
Q 020633 146 LMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 146 ~~a~~~p~~~v~~~vl~~~~ 165 (323)
.+++..+. |++.|..+-.
T Consensus 242 ~LaALDdR--Ika~v~~~~l 259 (390)
T PF12715_consen 242 WLAALDDR--IKATVANGYL 259 (390)
T ss_dssp HHHHH-TT----EEEEES-B
T ss_pred HHHHcchh--hHhHhhhhhh
Confidence 99998655 8888876644
No 111
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.63 E-value=4.7e-13 Score=104.83 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=144.2
Q ss_pred eEEEcCCC-cEEEEEecCCCC---CcceEEEEecCCCCC----ccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCccc
Q 020633 33 KYFETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSD----TGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~---~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~ 103 (323)
..+..... .|..++|.|... +..|.||++||+|.. ....|..+...+++. +..|+++|||=--+..-+
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P--- 140 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP--- 140 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC---
Confidence 34444444 788899998763 457999999999732 122677888887554 889999999943322211
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC-----CCceeEEEEccCcccCCCCCchhhHH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE-----PNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
..+++..+.+.-+.++.-...+.|..+++|+|-|.||.+|..++.+.- ..++++.|++.|+.............
T Consensus 141 -a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 141 -AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred -ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 133444444444444312234456789999999999999998887632 12399999999988765544332210
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHH-hcCCCCc--CCCCchhHHHHHHHHHHHHHhcCCCCCc-CEEEE
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI-ASNPRRY--TGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTV 254 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i 254 (323)
..... ..........++ ...+... ...+... .... ..........+ |+|++
T Consensus 220 ~~~~~-------------------~~~~~~~~~~~w~~~lP~~~~~~~~p~~n---p~~~---~~~~d~~~~~lp~tlv~ 274 (336)
T KOG1515|consen 220 NLNGS-------------------PELARPKIDKWWRLLLPNGKTDLDHPFIN---PVGN---SLAKDLSGLGLPPTLVV 274 (336)
T ss_pred hhcCC-------------------cchhHHHHHHHHHHhCCCCCCCcCCcccc---cccc---ccccCccccCCCceEEE
Confidence 00000 000000000000 0000000 0000000 0000 00112223344 59999
Q ss_pred eeCCCcccCchhHHHHHHHcCCC--CccEEEecCCCcccccCCCc-hhHHHHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDER 314 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~ 314 (323)
.++.|.+.. ....+.+++... .+++..++++.|.+++..+. ..+.++.+.+.+|+++.
T Consensus 275 ~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 275 VAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999998864 445555555433 34566789999999988776 67788999999999764
No 112
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.62 E-value=1.2e-14 Score=127.11 Aligned_cols=232 Identities=15% Similarity=0.110 Sum_probs=132.2
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc--------------CCCCCCCeEEEEech
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS--------------EPYRDLPGFLFGESM 139 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~~~~~~~~l~G~S~ 139 (323)
.+.+.|+++||.|+..|.||.|.|.+.... -.....+|..++|+++..+ .++..++|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 356788999999999999999999886432 1245578999999999842 233467999999999
Q ss_pred hHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh----hhhhhcccccCCcccccccccCC-hHHHHHH
Q 020633 140 GGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL----LFGLADTWAAMPDNKMVGKAIKD-PEKLKVI 214 (323)
Q Consensus 140 Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 214 (323)
||.+++.+|...|+. ++++|..++..+................. ...+. ...... .......... .......
T Consensus 348 ~G~~~~~aAa~~pp~-LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~-~~~~~r-~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 348 LGTLPNAVATTGVEG-LETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLA-ELTYSR-NLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHHHhhCCCc-ceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHH-HHhhhc-ccCcchhhcchHHHHHHH
Confidence 999999999988887 99999988765432111000000000000 00000 000000 0000000000 0000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC--CCccEEEecCCCcccc
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 292 (323)
........ .. .....++.... .+...+.++++|+|+|+|..|..++++.+.++++.+.. ...++.+.+ .+|...
T Consensus 425 ~~~~~~~~-~~-~~~y~~fW~~r-n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~ 500 (767)
T PRK05371 425 AELTAAQD-RK-TGDYNDFWDDR-NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYP 500 (767)
T ss_pred hhhhhhhh-hc-CCCccHHHHhC-CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCC
Confidence 00000000 00 00000111111 13345678999999999999999998888888887742 235565544 578654
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 293 QGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
. .....++.+.+.+||+.++..
T Consensus 501 ~---~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 501 N---NWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred C---chhHHHHHHHHHHHHHhcccc
Confidence 2 223456788889999988764
No 113
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.60 E-value=9e-14 Score=108.75 Aligned_cols=277 Identities=13% Similarity=0.087 Sum_probs=157.7
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCC-cceEEEEecCCCCCcc----ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQK-VKATVYMTHGYGSDTG----WMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~vv~~HG~~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
+..++..+...+..+.+..|.|...+ -+++++++|.+-.... ..-..++..|.++|+.|+.+++++-..+..
T Consensus 79 va~tpg~vV~~ndv~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--- 155 (445)
T COG3243 79 VATTPGKVVFRNDVLELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--- 155 (445)
T ss_pred hhcCCceEEEeechhhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---
Confidence 33444444444333444455554422 4678999998753211 022467889999999999999997766644
Q ss_pred cCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh-----
Q 020633 103 YLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK----- 176 (323)
Q Consensus 103 ~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~----- 176 (323)
..++++++ +.+...++.+....+ .++|.++|+|.||.++..+++.++.++|+.++++.+..++........
T Consensus 156 -~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~ 232 (445)
T COG3243 156 -AKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEA 232 (445)
T ss_pred -hccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHH
Confidence 23788888 788888887776643 468999999999999999888888767999998887766554222111
Q ss_pred HHHHHhhhh--hhhhcccc------cCCccccc-----ccccC----ChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--
Q 020633 177 LHLFMYGLL--FGLADTWA------AMPDNKMV-----GKAIK----DPEKLKVIASNPRRYTGKPRVGTMREIARVC-- 237 (323)
Q Consensus 177 ~~~~~~~~~--~~~~~~~~------~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (323)
....+...+ ....+.+. ......+. ..... -+........+.. .........+.+.+
T Consensus 233 ~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst----~~~~~~~~~~Lrn~y~ 308 (445)
T COG3243 233 TIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADST----RLPGAAHSEYLRNFYL 308 (445)
T ss_pred HHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCc----cCchHHHHHHHHHHHH
Confidence 001110000 00111100 00000000 00000 0001111111111 11122222222211
Q ss_pred --HHH---------HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC-CchhHHHHHH
Q 020633 238 --QYI---------QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PDENANLVLK 305 (323)
Q Consensus 238 --~~~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~ 305 (323)
.-. .-.+.+|+||++.+.|++|.++|.+.+....+.+++ .++++..+ +||...+-. |.....+.+.
T Consensus 309 ~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~vVN~p~~~k~~~w~ 386 (445)
T COG3243 309 ENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAGVVNPPGNAKYQYWT 386 (445)
T ss_pred hChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEEEeCCcchhhhhcCC
Confidence 101 124678999999999999999999999888888843 35555555 799876544 3333333444
Q ss_pred ----HHHHHHHHHHh
Q 020633 306 ----DMREWIDERVE 316 (323)
Q Consensus 306 ----~i~~fl~~~~~ 316 (323)
.+..|+.+...
T Consensus 387 n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 387 NLPADAEAWLSGAKE 401 (445)
T ss_pred CCcchHHHHHHhhcc
Confidence 77788876543
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.60 E-value=9.7e-15 Score=110.05 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=73.5
Q ss_pred EEEecCCCCC---ccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc---CCCCCC
Q 020633 58 VYMTHGYGSD---TGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS---EPYRDL 130 (323)
Q Consensus 58 vv~~HG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 130 (323)
||++||++.. .. ....++..+++ .|+.|+.+|+|-.. ...+.+..+|+.++++++... .+.+..
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeeccccc--------cccccccccccccceeeecccccccccccc
Confidence 7999999854 33 34556666665 79999999999331 126778889999999988876 233467
Q ss_pred CeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVI 168 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~ 168 (323)
+++|+|+|.||.+++.++....+ ..++++++++|..+.
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999876322 238999999997765
No 115
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.59 E-value=2.1e-14 Score=123.49 Aligned_cols=119 Identities=17% Similarity=0.081 Sum_probs=91.1
Q ss_pred ceeEEEcCCC-cEEEEEecCCC------CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC---
Q 020633 31 GKKYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--- 100 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--- 100 (323)
....+..+++ +|.|...+... ....|+||++||++++.. .|..+++.|+++||+|+++|+||||.|...
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccc
Confidence 3346667777 77776654331 123579999999999888 899999999989999999999999999432
Q ss_pred -------cc---c---------CCChHHHhhcHHHHHHHHH------hc----CCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 101 -------RC---Y---------LGDMEKVAASSLSFFKHVR------DS----EPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 101 -------~~---~---------~~~~~~~~~d~~~~l~~l~------~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.. + ..++++.+.|+..+...+. .+ ...+..+++++||||||.++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1267899999999999887 22 11336699999999999999999875
No 116
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.3e-13 Score=118.91 Aligned_cols=227 Identities=16% Similarity=0.166 Sum_probs=146.6
Q ss_pred CC-cEEEEEecCCC---CCcceEEEEecCCCCCc----c--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-----cc
Q 020633 39 NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----G--WMFQKICISFATWGYAVFAADLLGHGRSDGIR-----CY 103 (323)
Q Consensus 39 ~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~ 103 (323)
+| ...+....|++ .++-|.+|.+||++++. . ..|... .+...|+.|+.+|.||.|.....- ..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~ 583 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRN 583 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhh
Confidence 78 89899998864 35678999999998632 1 122222 355679999999999987664221 11
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+ .-++|...+++.+....-+|..++.++|+|.||.+++.++...++..+++.+.++|..+.. ........+
T Consensus 584 lG~--~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~ter---- 656 (755)
T KOG2100|consen 584 LGD--VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTER---- 656 (755)
T ss_pred cCC--cchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHh----
Confidence 111 1235555555655555556688999999999999999999998855477779999987643 111000000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE-EEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF-LTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~i~g~~D~~~ 262 (323)
.+.....+.. ...+.. ....+..++.|. |++||+.|..|
T Consensus 657 ----------------ymg~p~~~~~--~y~e~~----------------------~~~~~~~~~~~~~LliHGt~DdnV 696 (755)
T KOG2100|consen 657 ----------------YMGLPSENDK--GYEESS----------------------VSSPANNIKTPKLLLIHGTEDDNV 696 (755)
T ss_pred ----------------hcCCCccccc--hhhhcc----------------------ccchhhhhccCCEEEEEcCCcCCc
Confidence 0000000000 000000 123344455555 99999999999
Q ss_pred CchhHHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 263 CPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+++..+.+++.. -..++.++|+.+|.+.. ......+...+..|+...+..
T Consensus 697 h~q~s~~~~~aL~~~gv~~~~~vypde~H~is~---~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 697 HFQQSAILIKALQNAGVPFRLLVYPDENHGISY---VEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred CHHHHHHHHHHHHHCCCceEEEEeCCCCccccc---ccchHHHHHHHHHHHHHHcCc
Confidence 99999988888743 23678899999999983 233356888999999976654
No 117
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.56 E-value=2.4e-13 Score=99.30 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=90.5
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.....++.|..++..|+|+|+||+.-... .|..+..+++.+||.|+++++-..- . + +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~-~--p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLF-P--P-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhccc-C--C-----CchHHHHHHHHHHHH
Confidence 45666777877778999999999987766 8999999999999999999986421 1 1 223334556666666
Q ss_pred HHhcC--------CCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCC
Q 020633 121 VRDSE--------PYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 121 l~~~~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~ 169 (323)
+.... ..+-.++.++|||.||-.|..+|..+ .+.+++++|.++|.....
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 65431 12356899999999999999999887 455589999999987644
No 118
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.56 E-value=4.6e-13 Score=98.82 Aligned_cols=123 Identities=14% Similarity=0.079 Sum_probs=85.4
Q ss_pred EEEEEecCCCC--CcceEEEEecCCCCCccccHHHH--HHHHhh-CCcEEEEecCCCCcCCCCCc----ccCCChHHHhh
Q 020633 42 LFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKI--CISFAT-WGYAVFAADLLGHGRSDGIR----CYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~--~~~l~~-~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~ 112 (323)
|.|.+|.|++. .+.|+||++||.+.+.. .+... ...|++ +||.|+.++........... .....-.....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 46888988752 35699999999998765 33221 123444 58999988854221111000 00001112245
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+.++++++..++.+|..+|++.|+|.||.++..++..+|+. +.++...++..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL-FAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc-ceEEEeecccc
Confidence 677888989888889999999999999999999999999999 99888776653
No 119
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.55 E-value=1.2e-13 Score=111.35 Aligned_cols=189 Identities=17% Similarity=0.244 Sum_probs=104.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC------CCC---cc-----c-------CC------
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS------DGI---RC-----Y-------LG------ 105 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s------~~~---~~-----~-------~~------ 105 (323)
++.|+|||-||++++.. .|..++..|+.+||.|+++|.|..-.+ +.. .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 45799999999999887 899999999999999999999953211 000 00 0 00
Q ss_pred -------ChHHHhhcHHHHHHHHHhcC--------------------CCCCCCeEEEEechhHHHHHHHhhhcCCCceeE
Q 020633 106 -------DMEKVAASSLSFFKHVRDSE--------------------PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTG 158 (323)
Q Consensus 106 -------~~~~~~~d~~~~l~~l~~~~--------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~ 158 (323)
-++.-+.++..+++.+..-. .++..+++++|||+||..++..+.+. .+ +++
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r-~~~ 254 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TR-FKA 254 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cC-cce
Confidence 01122355666666554210 01234799999999999999888776 44 999
Q ss_pred EEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH
Q 020633 159 LIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ 238 (323)
Q Consensus 159 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
.|+++|+...-.
T Consensus 255 ~I~LD~W~~Pl~-------------------------------------------------------------------- 266 (379)
T PF03403_consen 255 GILLDPWMFPLG-------------------------------------------------------------------- 266 (379)
T ss_dssp EEEES---TTS---------------------------------------------------------------------
T ss_pred EEEeCCcccCCC--------------------------------------------------------------------
Confidence 999998753110
Q ss_pred HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc-CCCCccEEEecCCCcccccC-------------------CCch
Q 020633 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA-SSADKSIKIYDGMYHSLIQG-------------------EPDE 298 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~-------------------~~~~ 298 (323)
.+....++.|+|+|+.+. +.-.+....+.+.. ...+..++.+.|+.|..+-+ +|..
T Consensus 267 --~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~ 342 (379)
T PF03403_consen 267 --DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPER 342 (379)
T ss_dssp --GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHH
T ss_pred --cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHH
Confidence 112245678999998874 22222333333222 12456788999999986522 2334
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 020633 299 NANLVLKDMREWIDERVE 316 (323)
Q Consensus 299 ~~~~~~~~i~~fl~~~~~ 316 (323)
..+...+.+.+||++++.
T Consensus 343 a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 343 ALRINNRASLAFLRRHLG 360 (379)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 566778889999999975
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.53 E-value=6.6e-14 Score=98.10 Aligned_cols=198 Identities=14% Similarity=0.106 Sum_probs=128.7
Q ss_pred CcEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
|+-...+|++. +..+..||+||+-.... ..--.++..+.++||+|.++++ +.+... .++++.+.++...
T Consensus 54 g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~----htL~qt~~~~~~g 124 (270)
T KOG4627|consen 54 GRQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQV----HTLEQTMTQFTHG 124 (270)
T ss_pred CceEEEEecCC--CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccc----ccHHHHHHHHHHH
Confidence 35667888875 55789999999753211 0112344556678999999864 444322 2677777777777
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
++++-...+ ..+.+.+-|||.|+.+|+.+..+..+.+|.++++.++.+.......... .
T Consensus 125 v~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~------------------g-- 183 (270)
T KOG4627|consen 125 VNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTES------------------G-- 183 (270)
T ss_pred HHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcc------------------c--
Confidence 777766544 1335778899999999999888754444999999998765332111000 0
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
..++..... ..........+..+++|+|++.|+.|.---.++.+.+...+ .
T Consensus 184 -~dlgLt~~~--------------------------ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~--~ 234 (270)
T KOG4627|consen 184 -NDLGLTERN--------------------------AESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL--R 234 (270)
T ss_pred -cccCcccch--------------------------hhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh--h
Confidence 000000000 00000012345678899999999999766678888888888 5
Q ss_pred CccEEEecCCCcccccCCC
Q 020633 278 DKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~ 296 (323)
.+.+..+++.+|+-.+++.
T Consensus 235 ~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 235 KASFTLFKNYDHYDIIEET 253 (270)
T ss_pred hcceeecCCcchhhHHHHh
Confidence 6889999999999886544
No 121
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.52 E-value=4.6e-12 Score=98.01 Aligned_cols=222 Identities=12% Similarity=-0.001 Sum_probs=127.2
Q ss_pred CcceEEEEecCCCCCccccHHHH-HHHHhhCCcEEEEecCCCCcCCCCCcccC---CCh-------HHHhhcHHHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKI-CISFATWGYAVFAADLLGHGRSDGIRCYL---GDM-------EKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~-------~~~~~d~~~~l~~l 121 (323)
..+|.+|.+.|.|.+.-|.-..+ +..|.++|+..+.+..|-||...+..... .++ ...+.+...+++++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999987654333445 78888889999999999999876332211 122 23346777888888
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC----CCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE----NMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
..+ + ..++.+.|.||||.+|...+...|.. +..+-++++...... .+.....+..+...+... ....
T Consensus 170 ~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~p-v~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~----~~~~- 240 (348)
T PF09752_consen 170 ERE-G--YGPLGLTGISMGGHMAALAASNWPRP-VALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDT----VYEE- 240 (348)
T ss_pred Hhc-C--CCceEEEEechhHhhHHhhhhcCCCc-eeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhccc----chhh-
Confidence 887 3 66999999999999999999999986 766666654332111 000000111111110000 0000
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc-----CEEEEeeCCCcccCchhHHHHHH
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-----PFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
................. ............+....+ ....+.+..+ .+.+|.+++|..||...+..+.+
T Consensus 241 --~~~~~~~~~~~~~~~~~----~~~~~~~Ea~~~m~~~md-~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 241 --EISDIPAQNKSLPLDSM----EERRRDREALRFMRGVMD-SFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred --hhcccccCcccccchhh----ccccchHHHHHHHHHHHH-hhccccccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 00000000000000000 000001111111111111 1223333333 47899999999999999999999
Q ss_pred HcCCCCccEEEecCCCccccc
Q 020633 273 KASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~ 293 (323)
.. +++++.++++ ||...+
T Consensus 314 ~W--PGsEvR~l~g-GHVsA~ 331 (348)
T PF09752_consen 314 IW--PGSEVRYLPG-GHVSAY 331 (348)
T ss_pred hC--CCCeEEEecC-CcEEEe
Confidence 99 8899999997 997653
No 122
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.51 E-value=1.2e-13 Score=102.86 Aligned_cols=180 Identities=10% Similarity=0.020 Sum_probs=89.7
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+-+..++++|.....++..+|.|+|.|.||-+|+.+|..+|+ |+++|.++|............... ...+.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~--i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~ 74 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ--ISAVVAISPSSVVFQGIGFYRDSS-------KPLPY 74 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS--EEEEEEES--SB--SSEEEETTE---------EE--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC--ccEEEEeCCceeEecchhcccCCC-------ccCCc
Confidence 446778888888877677899999999999999999999995 999999998765443221110000 00000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHH
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~ 270 (323)
.......... ..................... ...-.+.++++|+|+|.|++|...|... ++.+
T Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i 138 (213)
T PF08840_consen 75 LPFDISKFSW-NEPGLLRSRYAFELADDKAVE---------------EARIPVEKIKGPILLISGEDDQIWPSSEMAEQI 138 (213)
T ss_dssp --B-GGG-EE--TTS-EE-TT-B--TTTGGGC---------------CCB--GGG--SEEEEEEETT-SSS-HHHHHHHH
T ss_pred CCcChhhcee-cCCcceehhhhhhcccccccc---------------cccccHHHcCCCEEEEEeCCCCccchHHHHHHH
Confidence 0000000000 000000000000000000000 0012356789999999999999998654 4444
Q ss_pred HHHcC---CC-CccEEEecCCCcccccCC-C--------------------c---hhHHHHHHHHHHHHHHHHh
Q 020633 271 YEKAS---SA-DKSIKIYDGMYHSLIQGE-P--------------------D---ENANLVLKDMREWIDERVE 316 (323)
Q Consensus 271 ~~~~~---~~-~~~~~~~~~~gH~~~~~~-~--------------------~---~~~~~~~~~i~~fl~~~~~ 316 (323)
.+++. .+ +.+++.|+++||.+..-- | + ...++.+..+++||++++.
T Consensus 139 ~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 139 EERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55442 12 468889999999975210 0 0 1456788999999999875
No 123
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.2e-12 Score=107.06 Aligned_cols=235 Identities=16% Similarity=0.111 Sum_probs=145.0
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc----cccHHH--HHHHHhhCCcEEEEecCCCCcCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQK--ICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
+.+-+.+.+..| .++..+|.|.+ +++.|+|+++-|+++-. .+.+.. -...|+..||.|+.+|-||.....
T Consensus 612 p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 612 PPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRG 691 (867)
T ss_pred ChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccc
Confidence 335566778778 89999999875 35689999999998531 111211 234688899999999999875543
Q ss_pred CC-------cccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 99 GI-------RCYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 99 ~~-------~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
-. .-....+++.++- ++.|..+.+ +|-++|.|-|+|+||++++....++|+- ++..|.-+|......
T Consensus 692 lkFE~~ik~kmGqVE~eDQVeg----lq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I-frvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVEVEDQVEG----LQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI-FRVAIAGAPVTDWRL 766 (867)
T ss_pred hhhHHHHhhccCeeeehhhHHH----HHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce-eeEEeccCcceeeee
Confidence 11 1111133444444 444444442 4577999999999999999999999997 777777776543211
Q ss_pred CCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC
Q 020633 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
. +....+.+...+..-.......... ...+.+..-...
T Consensus 767 Y-----------------------------------DTgYTERYMg~P~~nE~gY~agSV~-------~~VeklpdepnR 804 (867)
T KOG2281|consen 767 Y-----------------------------------DTGYTERYMGYPDNNEHGYGAGSVA-------GHVEKLPDEPNR 804 (867)
T ss_pred e-----------------------------------cccchhhhcCCCccchhcccchhHH-------HHHhhCCCCCce
Confidence 0 0000000111110000000000000 022334444556
Q ss_pred EEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 251 FLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.|++||--|.-|.......+...+- ++.-+++++|+..|.+-- .+...-+-..+..|+.+
T Consensus 805 LlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~---~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 805 LLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN---PESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC---CccchhHHHHHHHHHhh
Confidence 8999999999998877777766652 345689999999998863 23334455677888764
No 124
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.50 E-value=1.1e-12 Score=107.87 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=107.3
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEec--CCCCCc--cccHHHHHH---HHhhCCcEEEEecCCCCcCCCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTH--GYGSDT--GWMFQKICI---SFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~H--G~~~~~--~~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
+-.....+++.|| +|+..+|.|.+.++.|+++..+ ...-.. ...-..... .++.+||.|+..|.||.|.|.+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 4445688999999 9999999999878899999999 333221 001122233 5788999999999999999998
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
......+ +-++|-.++|+++..+ ++.+++|..+|.|++|...+.+|+..|.. +++++...+..+.
T Consensus 97 ~~~~~~~--~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa-Lkai~p~~~~~D~ 161 (563)
T COG2936 97 VFDPESS--REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPA-LKAIAPTEGLVDR 161 (563)
T ss_pred ccceecc--ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCch-heeeccccccccc
Confidence 7665444 4578888899988874 45578999999999999999999998877 8888887776653
No 125
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.49 E-value=1.5e-12 Score=96.83 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=76.8
Q ss_pred CCC-cEEEEEecCCC---CCcc-eEEEEecCCCCCccccHHHHHH-------HHhhCCcEEEEecCCC-CcCCCCCcccC
Q 020633 38 PNG-KLFTQSFLPLD---QKVK-ATVYMTHGYGSDTGWMFQKICI-------SFATWGYAVFAADLLG-HGRSDGIRCYL 104 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~---~~~~-~~vv~~HG~~~~~~~~~~~~~~-------~l~~~g~~v~~~d~~G-~G~s~~~~~~~ 104 (323)
..| +|.|+.|.|.+ .++. |.|||+||.|..+......+.. ..-+.++-|+++.+-- +-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----- 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-----
Confidence 345 99999999954 1334 9999999998654422222211 1111223333333110 000111
Q ss_pred CChHHHhhcHHHHH-HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 105 GDMEKVAASSLSFF-KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 105 ~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..+.+......++ +.+..++.+|..+|+++|.|+||..++.++.++|+. +.+.+++++..
T Consensus 244 -~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf-FAaa~~iaG~~ 304 (387)
T COG4099 244 -KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF-FAAAVPIAGGG 304 (387)
T ss_pred -ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh-hheeeeecCCC
Confidence 1122223333334 477778888899999999999999999999999999 99999988654
No 126
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.49 E-value=2.9e-12 Score=96.92 Aligned_cols=209 Identities=20% Similarity=0.191 Sum_probs=122.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHh-hCCc--E--EEEecCCCC----cCCCC---C-------cccC-CChHHHhh
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFA-TWGY--A--VFAADLLGH----GRSDG---I-------RCYL-GDMEKVAA 112 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~-~~g~--~--v~~~d~~G~----G~s~~---~-------~~~~-~~~~~~~~ 112 (323)
....|.||+||++++.. .+..++..+. ++|. . ++.++--|. |.-.. . .... .++...+.
T Consensus 9 ~~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cCCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 34679999999999877 8999999997 6554 2 344444443 22111 0 0111 25778899
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---C-ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---N-TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.+..++.+|..++. -.++-+|||||||..++.++..+.. . .+..+|.+++++..........
T Consensus 88 wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~------------ 153 (255)
T PF06028_consen 88 WLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ------------ 153 (255)
T ss_dssp HHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T------------
T ss_pred HHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc------------
Confidence 99999999999987 6689999999999999999887432 1 2899999887655321111000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeC------CCcc
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGT------ADGV 261 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~------~D~~ 261 (323)
....+... + .......+...... +..+++ ++.+|-|.|. .|..
T Consensus 154 -------~~~~~~~~-------------------g---p~~~~~~y~~l~~~~~~~~p~-~i~VLnI~G~~~~g~~sDG~ 203 (255)
T PF06028_consen 154 -------NQNDLNKN-------------------G---PKSMTPMYQDLLKNRRKNFPK-NIQVLNIYGDLEDGSNSDGI 203 (255)
T ss_dssp -------TTT-CSTT-----------------------BSS--HHHHHHHHTHGGGSTT-T-EEEEEEEESBTTCSBTSS
T ss_pred -------hhhhhccc-------------------C---CcccCHHHHHHHHHHHhhCCC-CeEEEEEecccCCCCCCCeE
Confidence 00000000 0 00011111111111 122222 6789999998 7889
Q ss_pred cCchhHHHHHHHcCC--CCccEEEecC--CCcccccCCCchhHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASS--ADKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
||...++.+...+.. ...+-.++.| +.|.-..+.+ ++.+.|.+||
T Consensus 204 V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-----~V~~~I~~FL 252 (255)
T PF06028_consen 204 VPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-----QVDKLIIQFL 252 (255)
T ss_dssp SBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-----HHHHHHHHHH
T ss_pred EeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-----HHHHHHHHHh
Confidence 998888877777743 2334555544 6898885443 3888888887
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.49 E-value=1.5e-12 Score=100.88 Aligned_cols=240 Identities=20% Similarity=0.182 Sum_probs=139.5
Q ss_pred ccCcc-cceeEEEcCC-C-cEEEEEecCCCC-C-----cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-
Q 020633 25 SQGVR-NGKKYFETPN-G-KLFTQSFLPLDQ-K-----VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH- 94 (323)
Q Consensus 25 ~~~~~-~~~~~~~~~~-g-~l~~~~~~~~~~-~-----~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~- 94 (323)
..+.. ...+.+.... + ++....+.+... . ..|+|++-||.|+... .|..+++.|++.||.|.++|.+|.
T Consensus 32 ~~g~~~~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~ 110 (365)
T COG4188 32 PEGVALFVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSN 110 (365)
T ss_pred ccCcceEEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcc
Confidence 33443 3334444433 3 677777766542 2 5799999999998877 899999999999999999999985
Q ss_pred -cCCCCCccc-----CCChHHHhhcHHHHHHHHHhc---C----CCCCCCeEEEEechhHHHHHHHhhhcCCCc------
Q 020633 95 -GRSDGIRCY-----LGDMEKVAASSLSFFKHVRDS---E----PYRDLPGFLFGESMGGAATMLMYFQSEPNT------ 155 (323)
Q Consensus 95 -G~s~~~~~~-----~~~~~~~~~d~~~~l~~l~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~------ 155 (323)
|..+..... ...+-+...|+..+|++|... . ..+..+|.++|||+||+.++.++..+.+..
T Consensus 111 ~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C 190 (365)
T COG4188 111 AGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHC 190 (365)
T ss_pred cccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHh
Confidence 333311110 012335567888888887766 2 145679999999999999999887654420
Q ss_pred -eeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH
Q 020633 156 -WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 156 -v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
..+.++..+... . ...+. .....+. .......+++..+..+..++..-.. .
T Consensus 191 ~~~~~~~~~~~~~------~---~~~l~----q~~av~~-----~~~~~~~rDpriravvA~~p~~~~~-------F--- 242 (365)
T COG4188 191 ESASRICLDPPGL------N---GRLLN----QCAAVWL-----PRQAYDLRDPRIRAVVAINPALGMI-------F--- 242 (365)
T ss_pred hhhhhcccCCCCc------C---hhhhc----ccccccc-----chhhhccccccceeeeeccCCcccc-------c---
Confidence 000111111000 0 00000 0000000 0011111222211111111110000 0
Q ss_pred HHHHHHHhcCCCCCcCEEEEeeCCCcccCch-hHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
-...+.++++|++++.|..|.+.|.. .....+..+.+....+..++++.|+.+++...+
T Consensus 243 -----g~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 243 -----GTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred -----ccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 13456788999999999999987754 344556667555557888999999999765554
No 128
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.47 E-value=3.4e-12 Score=87.84 Aligned_cols=176 Identities=13% Similarity=0.011 Sum_probs=113.0
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
+.+|++||++++....|+...+.-. -.+-.+++. .-.....+++++.+.+.+... .++++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-------~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD--------DWEAPVLDDWIARLEKEVNAA-------EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC--------CCCCCCHHHHHHHHHHHHhcc-------CCCeEEE
Confidence 5789999998876546655433211 112223322 111126777777777766665 2369999
Q ss_pred EechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh
Q 020633 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
+||+|+.+++.++...... |.|+++++|+-..........
T Consensus 65 AHSLGc~~v~h~~~~~~~~-V~GalLVAppd~~~~~~~~~~--------------------------------------- 104 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQ-VAGALLVAPPDVSRPEIRPKH--------------------------------------- 104 (181)
T ss_pred EecccHHHHHHHHHhhhhc-cceEEEecCCCccccccchhh---------------------------------------
Confidence 9999999999999886665 999999998743221100000
Q ss_pred cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC
Q 020633 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 295 (323)
...+. .....++.-|.+++.+.+|++++++.++.+++.+ +..++....+||... +.
T Consensus 105 --~~tf~------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~-~s 160 (181)
T COG3545 105 --LMTFD------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINA-ES 160 (181)
T ss_pred --ccccC------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccch-hh
Confidence 00000 0112334569999999999999999999999998 467888888888776 22
Q ss_pred CchhHHHHHHHHHHHHHH
Q 020633 296 PDENANLVLKDMREWIDE 313 (323)
Q Consensus 296 ~~~~~~~~~~~i~~fl~~ 313 (323)
.-....+....+.+|+.+
T Consensus 161 G~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 161 GFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCcHHHHHHHHHHhhh
Confidence 223344456666666543
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.47 E-value=3.3e-12 Score=90.05 Aligned_cols=103 Identities=19% Similarity=0.181 Sum_probs=83.3
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
..+||+-|=|+-.. .-..+++.|+++|+.|+.+|-+-|=.+.. +.++.+.|+..++++...+.. ..+++|+
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w~--~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARWG--RKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHhC--CceEEEE
Confidence 56788888776655 66789999999999999999876655532 678889999999999888865 7799999
Q ss_pred EechhHHHHHHHhhhcCCC---ceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQSEPN---TWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~ 167 (323)
|+|+|+-+.-....+.|.. +|+.++|++|...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999998887777766531 3999999988643
No 130
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.46 E-value=2.7e-12 Score=98.44 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=91.7
Q ss_pred EcCCC-cEEEEEecCCCC---CcceEEEEecCCCCCccccHHHHHHHHhhC---------CcEEEEecCCCCcCCCCCcc
Q 020633 36 ETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICISFATW---------GYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~~ 102 (323)
+...| +||+....++.. +.-.+++++|||+|+-. .|-.++..|.+. -|.||++.+||+|.|+++..
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34578 999998887642 23358999999999876 666777777543 27899999999999997765
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
...+..+.+.-+..++-.++ -.++.|-|-.+|+.|+..+|..+|++ |.|+-+-.
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg------~nkffiqGgDwGSiI~snlasLyPen-V~GlHlnm 261 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLG------YNKFFIQGGDWGSIIGSNLASLYPEN-VLGLHLNM 261 (469)
T ss_pred CCccHHHHHHHHHHHHHHhC------cceeEeecCchHHHHHHHHHhhcchh-hhHhhhcc
Confidence 54455665555555555554 44899999999999999999999998 88776533
No 131
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.4e-11 Score=88.08 Aligned_cols=180 Identities=15% Similarity=0.152 Sum_probs=113.2
Q ss_pred cceEEEEecCCCCCccccHH----HHHHHHhhCCcEEEEecCCC----CcCCC--C------Cc------c--------c
Q 020633 54 VKATVYMTHGYGSDTGWMFQ----KICISFATWGYAVFAADLLG----HGRSD--G------IR------C--------Y 103 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G----~G~s~--~------~~------~--------~ 103 (323)
.++-|||+||+-.+.. .|. .+.+.|.+. +..+.+|-|- -+.+. . +. . .
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4688999999987655 443 345556555 7778777662 01111 0 00 0 0
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh---------cCCCceeEEEEccCcccCCCCCch
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ---------SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.......-+.+..+.+++....+. -.|+|+|.|+.++..++.. +|. ++-+|+++++........
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF----DGllGFSQGA~laa~l~~~~~~~~~~~~~P~--~kF~v~~SGf~~~~~~~~- 154 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF----DGLLGFSQGAALAALLAGLGQKGLPYVKQPP--FKFAVFISGFKFPSKKLD- 154 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC----ccccccchhHHHHHHhhcccccCCcccCCCC--eEEEEEEecCCCCcchhh-
Confidence 001111223355566666665432 3599999999999988872 122 678888887643210000
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
-......+++|.|-|
T Consensus 155 -----------------------------------------------------------------~~~~~~~i~~PSLHi 169 (230)
T KOG2551|consen 155 -----------------------------------------------------------------ESAYKRPLSTPSLHI 169 (230)
T ss_pred -----------------------------------------------------------------hhhhccCCCCCeeEE
Confidence 112335689999999
Q ss_pred eeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.|+.|.++|.+.+..+++.+ ++..++.-+ +||.+.-.+ ...+.|.+||.....
T Consensus 170 ~G~~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~------~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 170 FGETDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA------KYKEKIADFIQSFLQ 222 (230)
T ss_pred ecccceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch------HHHHHHHHHHHHHHH
Confidence 99999999999999999999 666555555 589998222 366677777766554
No 132
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.40 E-value=6.2e-11 Score=98.56 Aligned_cols=136 Identities=21% Similarity=0.222 Sum_probs=93.4
Q ss_pred ceeEEEcCC---C-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH------------------HHhhCCcEEE
Q 020633 31 GKKYFETPN---G-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI------------------SFATWGYAVF 87 (323)
Q Consensus 31 ~~~~~~~~~---g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~------------------~l~~~g~~v~ 87 (323)
...++...+ + .++|+.+...+ ....|+||+++|++|.++ .+..+.+ .+.+. ..++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 445555532 5 89999998654 356799999999988765 3322210 12223 6789
Q ss_pred EecCC-CCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc---------CCCc
Q 020633 88 AADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS---------EPNT 155 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~~~ 155 (323)
.+|.| |+|.|..... ...+.++.++|+.++++..-.+.+ ....+++|+|||+||.++..+|..- ..-+
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~in 205 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYIN 205 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceee
Confidence 99975 8888864322 223567889999999987765543 2346899999999999988777652 1124
Q ss_pred eeEEEEccCcccC
Q 020633 156 WTGLIFSAPLFVI 168 (323)
Q Consensus 156 v~~~vl~~~~~~~ 168 (323)
++++++.++..+.
T Consensus 206 LkGi~IGNg~~dp 218 (462)
T PTZ00472 206 LAGLAVGNGLTDP 218 (462)
T ss_pred eEEEEEeccccCh
Confidence 8999998887653
No 133
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.40 E-value=1.7e-11 Score=95.85 Aligned_cols=230 Identities=21% Similarity=0.221 Sum_probs=118.5
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC---C-CCCCeEEEEechhHHHHHHHhh
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP---Y-RDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
.++..+.++||.|+++|+.|.|.. +. .-......+.+.++..+.-.+ . ...++.++|||.||.-++..+.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~-----y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP-----YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc-----cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 455667789999999999999872 11 222333444444444442221 1 2458999999999998876664
Q ss_pred h----cCCCc--eeEEEEccCcccCCCCCchh---hHHHHHhhhhhhhhcccccCCcccccccccCChH-----------
Q 020633 150 Q----SEPNT--WTGLIFSAPLFVIPENMKPS---KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE----------- 209 (323)
Q Consensus 150 ~----~p~~~--v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 209 (323)
. -|+.+ +.+.++.+++.++....... .........+..+...+.... ..+........
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~--~~~~~~l~~~g~~~~~~~~~~c 168 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELD--ELLDSYLTPEGRALLDDARTRC 168 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHH--HHHHHHhhHHHHHHHHHHHhhh
Confidence 3 36666 78888877765532211100 000001111111111111000 00000000000
Q ss_pred HHHHHhcC-CCCc--------CCCCchhHHHHHHHHHHHHHh---cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--
Q 020633 210 KLKVIASN-PRRY--------TGKPRVGTMREIARVCQYIQD---NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 210 ~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
........ .... ...........+.....+..- .-...++|+++.+|..|.++|......+.+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~ 248 (290)
T PF03583_consen 169 LADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAA 248 (290)
T ss_pred HHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHc
Confidence 00000000 0000 000000001112222221111 112347999999999999999999998888875
Q ss_pred C-CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 276 S-ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 276 ~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+ .+++++.+++.+|...... -......||.+++...
T Consensus 249 G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 249 GGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCC
Confidence 3 3577888899999875211 3366789999998654
No 134
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.37 E-value=9.4e-11 Score=85.11 Aligned_cols=234 Identities=10% Similarity=0.017 Sum_probs=129.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC-C--cEEEEecCCCCcCCC---C-----CcccCCChHHHhhcHHHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW-G--YAVFAADLLGHGRSD---G-----IRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~G~G~s~---~-----~~~~~~~~~~~~~d~~~~l~~l 121 (323)
..++.++++.|.+|... +|..++..|... + ..++.+-.-||-.-+ . ......++++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 56899999999999988 899998887654 1 458888777775443 1 1122346677776666666655
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
.-+ +.+++++|||.|+++.+.+... .+...|.+++++-|...--......+........+.....-...
T Consensus 106 ~Pk----~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~y------ 175 (301)
T KOG3975|consen 106 VPK----DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSY------ 175 (301)
T ss_pred CCC----CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeee------
Confidence 444 5699999999999999998874 33334778887766432111111111111110000000000000
Q ss_pred cccccCChHHHHHHhcCCCCcCC-------------------CCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 201 VGKAIKDPEKLKVIASNPRRYTG-------------------KPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
.-........+.++.....+... ....-...++........+...+..+-+.+.+|+.|.+
T Consensus 176 i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00000000011111000000000 00000111122222222334445567789999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
+|.+....+.+.++..+.++-+ +++.|.+.+...+.
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ 291 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQY 291 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHH
Confidence 9999999999999655666666 78999998655554
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.35 E-value=5e-12 Score=94.52 Aligned_cols=165 Identities=19% Similarity=0.204 Sum_probs=83.2
Q ss_pred cceEEEEecCCCCCccccHHH----HHHHHhhCCcEEEEecCCCCc-----CCC------------CCcccCC-------
Q 020633 54 VKATVYMTHGYGSDTGWMFQK----ICISFATWGYAVFAADLLGHG-----RSD------------GIRCYLG------- 105 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G-----~s~------------~~~~~~~------- 105 (323)
+++-||+|||++.+.. .++. +...|.+.++.++.+|-|--- ... .+...+.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4789999999999876 5644 455555536888888865221 110 0000000
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc----C---CCceeEEEEccCcccCCCCCchhhHH
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS----E---PNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p---~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
....+.+.+..+.+.+....+ =..|+|+|.||.+|..++... + ...++.+|+++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~------ 151 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY------ 151 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G------
T ss_pred cccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh------
Confidence 122233344444444444422 357999999999998888642 1 11278899988765321100
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.. .. .-.+|++|+|.|+|++
T Consensus 152 -----------------------~~------------------------------------~~-~~~~i~iPtlHv~G~~ 171 (212)
T PF03959_consen 152 -----------------------QE------------------------------------LY-DEPKISIPTLHVIGEN 171 (212)
T ss_dssp -----------------------TT------------------------------------TT---TT---EEEEEEETT
T ss_pred -----------------------hh------------------------------------hh-ccccCCCCeEEEEeCC
Confidence 00 00 1245799999999999
Q ss_pred CcccCchhHHHHHHHcCCCC-ccEEEecCCCcccc
Q 020633 259 DGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLI 292 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 292 (323)
|.+++++.++.+.+.+ .+ .+++..++ ||.+.
T Consensus 172 D~~~~~~~s~~L~~~~--~~~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 172 DPVVPPERSEALAEMF--DPDARVIEHDG-GHHVP 203 (212)
T ss_dssp -SSS-HHHHHHHHHHH--HHHEEEEEESS-SSS--
T ss_pred CCCcchHHHHHHHHhc--cCCcEEEEECC-CCcCc
Confidence 9999999999999888 44 66666674 88887
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.34 E-value=8.1e-11 Score=83.72 Aligned_cols=182 Identities=16% Similarity=0.155 Sum_probs=117.6
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC-----------------CCcccCCChHHHhhcHHHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-----------------GIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 117 (323)
..+||++||.+.+.. .|..+.+.|.-.....+++.-|-.-.+. .-......+...++-+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 468999999998776 7777777776556677776444221111 0001112344445556666
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
+++.... +++..++.+-|.|+||.+++..+..++.. +.+++...++........+.
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~-l~G~~~~s~~~p~~~~~~~~---------------------- 137 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKA-LGGIFALSGFLPRASIGLPG---------------------- 137 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccccc-cceeeccccccccchhhccC----------------------
Confidence 6655443 33456899999999999999999999776 77777766554311100000
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
.....+ ..|++..||+.|++||....+...+.+.
T Consensus 138 ------------------------------------------~~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~ 173 (206)
T KOG2112|consen 138 ------------------------------------------WLPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSL 173 (206)
T ss_pred ------------------------------------------CccccC--cchhheecccCCceeehHHHHHHHHHHHHc
Confidence 000001 6799999999999999876665555442
Q ss_pred CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...++++.|++.+|... ++ -.+.+..|+.+
T Consensus 174 ~~~~~f~~y~g~~h~~~---~~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 174 GVRVTFKPYPGLGHSTS---PQ-----ELDDLKSWIKT 203 (206)
T ss_pred CCceeeeecCCcccccc---HH-----HHHHHHHHHHH
Confidence 12388999999999988 33 35677778776
No 137
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.33 E-value=2.3e-11 Score=90.96 Aligned_cols=131 Identities=15% Similarity=0.051 Sum_probs=90.8
Q ss_pred eEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHH--HHHhh-CCcEEEEecCCCC-------cCCCCCc
Q 020633 33 KYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKIC--ISFAT-WGYAVFAADLLGH-------GRSDGIR 101 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~--~~l~~-~g~~v~~~d~~G~-------G~s~~~~ 101 (323)
..+.....+..|+.|.|..- ++.|.||++||.+++.. .+.... +.|++ .||-|+.+|--.. +.+..+.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~ 116 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPA 116 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence 33443333889999998763 34589999999987754 333222 33443 4999999853221 1121111
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..... .+-+..+.+++..+..++.++..+|++.|.|-||.++..++..+|+. +.++..+++..
T Consensus 117 ~~~~g-~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~-faa~A~VAg~~ 179 (312)
T COG3509 117 DRRRG-VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI-FAAIAPVAGLL 179 (312)
T ss_pred cccCC-ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc-ccceeeeeccc
Confidence 10112 23367788899999999999999999999999999999999999998 88888777654
No 138
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.32 E-value=6.5e-11 Score=88.84 Aligned_cols=111 Identities=13% Similarity=0.063 Sum_probs=73.3
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHh--------hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFA--------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE 125 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~--------~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 125 (323)
.+.+||||||.+++.. .++.+...+. ...++++++|+......-. . ..+.+..+-+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhh
Confidence 3679999999988766 6666665552 1247899999876432211 1 134444555555555554433
Q ss_pred ---CCCCCCeEEEEechhHHHHHHHhhhcC---CCceeEEEEccCcccCCC
Q 020633 126 ---PYRDLPGFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 126 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~~~~ 170 (323)
.....+++++||||||.+|..++.... +. |+.+|.++++.....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~-v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDS-VKTIITLGTPHRGSP 127 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhcccccccc-EEEEEEEcCCCCCcc
Confidence 123679999999999999988776533 34 999999987765443
No 139
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.31 E-value=2.2e-10 Score=109.11 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=82.7
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++++++||++++.. .|..+.+.|... +.|++++.+|++.+.. ...+++++++++.+.++.+.. ..++++
T Consensus 1068 ~~~l~~lh~~~g~~~-~~~~l~~~l~~~-~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~-----~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-QFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP-----HGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchH-HHHHHHHhcCCC-CcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC-----CCCEEE
Confidence 478999999998876 899999999654 9999999999986532 234899999999988887643 337999
Q ss_pred EEechhHHHHHHHhhh---cCCCceeEEEEccCc
Q 020633 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFSAPL 165 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~ 165 (323)
+|||+||.+|..+|.+ .+.+ +..++++++.
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~-v~~l~l~~~~ 1170 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEE-VAFLGLLDTW 1170 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCc-eeEEEEecCC
Confidence 9999999999999986 4666 9999988764
No 140
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.28 E-value=7.1e-10 Score=83.77 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=82.8
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
|+++++|+.+|... .|..++..|... ..|+.++.||.+.-.. ...+++++++...+.|..++- .++++|+
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~~---~~~~l~~~a~~yv~~Ir~~QP-----~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGEQ---PFASLDDMAAAYVAAIRRVQP-----EGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccC-ceeeccccCccccccc---ccCCHHHHHHHHHHHHHHhCC-----CCCEEEE
Confidence 57999999998876 899999999887 9999999999985322 223788888888887777765 4489999
Q ss_pred EechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
|||+||.+|..+|.+. ..+.|..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999998872 2223999999998766
No 141
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.28 E-value=1.5e-10 Score=86.91 Aligned_cols=111 Identities=16% Similarity=0.244 Sum_probs=74.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC------CC-ccc-C------C-------------
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD------GI-RCY-L------G------------- 105 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~------~~-~~~-~------~------------- 105 (323)
++.|+|||-||+|++.. .|..++-.|+.+||.|.+++.|.+..+. .. .+. . .
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 56799999999999877 8999999999999999999998764432 00 000 0 0
Q ss_pred -ChHHHhhcHHHHH---HHHHhcC------------------CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 106 -DMEKVAASSLSFF---KHVRDSE------------------PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 106 -~~~~~~~d~~~~l---~~l~~~~------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.+..-+.++..++ +.+..-. .++-.++.|+|||+||..++.....+.+ +++.|+++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~--FrcaI~lD 272 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD--FRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc--eeeeeeee
Confidence 0111122222222 2222110 1234578999999999999887777665 88988888
Q ss_pred Ccc
Q 020633 164 PLF 166 (323)
Q Consensus 164 ~~~ 166 (323)
.+.
T Consensus 273 ~WM 275 (399)
T KOG3847|consen 273 AWM 275 (399)
T ss_pred eee
Confidence 764
No 142
>PRK04940 hypothetical protein; Provisional
Probab=99.25 E-value=1.8e-09 Score=76.26 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=79.5
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++.+.+.+..+..... ..++.|+|.|+||+.|..++.++.- ..|+++|...+.... ...+..
T Consensus 40 ~~a~~~l~~~i~~~~~~~~--~~~~~liGSSLGGyyA~~La~~~g~----~aVLiNPAv~P~~~L---------~~~ig~ 104 (180)
T PRK04940 40 KHDMQHLLKEVDKMLQLSD--DERPLICGVGLGGYWAERIGFLCGI----RQVIFNPNLFPEENM---------EGKIDR 104 (180)
T ss_pred HHHHHHHHHHHHHhhhccC--CCCcEEEEeChHHHHHHHHHHHHCC----CEEEECCCCChHHHH---------HHHhCC
Confidence 3334445555543322110 1378999999999999999999764 367889876542110 000000
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC-CCCcCEEEEeeCCCcccCchh
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-KVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~ 266 (323)
.. . +. .+... ..+.++ +..-..+++..+.|++.+...
T Consensus 105 ---------~~--------------------~-y~---------~~~~~---h~~eL~~~~p~r~~vllq~gDEvLDyr~ 142 (180)
T PRK04940 105 ---------PE--------------------E-YA---------DIATK---CVTNFREKNRDRCLVILSRNDEVLDSQR 142 (180)
T ss_pred ---------Cc--------------------c-hh---------hhhHH---HHHHhhhcCcccEEEEEeCCCcccCHHH
Confidence 00 0 00 00000 011111 112246899999999998876
Q ss_pred HHHHHHHcCCCCc-cEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 267 SKLLYEKASSADK-SIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 267 ~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+...+. +. +..+.+|++|.+. ..++....|.+|++
T Consensus 143 a~~~y~-----~~y~~~v~~GGdH~f~------~fe~~l~~I~~F~~ 178 (180)
T PRK04940 143 TAEELH-----PYYEIVWDEEQTHKFK------NISPHLQRIKAFKT 178 (180)
T ss_pred HHHHhc-----cCceEEEECCCCCCCC------CHHHHHHHHHHHHh
Confidence 665543 34 6888899888876 24558888999984
No 143
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.22 E-value=3.9e-10 Score=92.08 Aligned_cols=187 Identities=17% Similarity=0.168 Sum_probs=119.8
Q ss_pred ceEEEEecCCC-C--Ccc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH--HHhcCCC
Q 020633 55 KATVYMTHGYG-S--DTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH--VRDSEPY 127 (323)
Q Consensus 55 ~~~vv~~HG~~-~--~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ 127 (323)
.|.+|++||.+ . .++ |.|........+. ..|.++|++.--.. .++...++.+..+.++ +......
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 58899999987 1 122 3333333333332 56677787732111 2555556666666552 2222223
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
...+|+|+|.|||+.++.+......+-.|+++|+++-......... ..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------gi-- 295 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------GI-- 295 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------CC--
Confidence 3779999999999988888777665544999999885443221100 00
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCC
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
..+.+-.++.|+|+|.|.+|..++++..+.+.+++.. ..+++++.++
T Consensus 296 --------------------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI~~a 342 (784)
T KOG3253|consen 296 --------------------------------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVIGGA 342 (784)
T ss_pred --------------------------------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEecCC
Confidence 1244556789999999999999999999999999863 5789999999
Q ss_pred CcccccCCC-----chhHHHHHHHHHHHHHHH
Q 020633 288 YHSLIQGEP-----DENANLVLKDMREWIDER 314 (323)
Q Consensus 288 gH~~~~~~~-----~~~~~~~~~~i~~fl~~~ 314 (323)
+|.+-.-.. ......+...+.+||.+.
T Consensus 343 dhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 343 DHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999875431 122334444455554443
No 144
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.22 E-value=5.9e-11 Score=90.34 Aligned_cols=129 Identities=14% Similarity=0.093 Sum_probs=87.0
Q ss_pred cceeEEEcCCC-cEEEEEec---CCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 30 NGKKYFETPNG-KLFTQSFL---PLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~---~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+..+.+.|| +|-..... ...++....|||+-|..+-.+ -.++..=++.||.|+.++.||++.|.+.+....
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE---vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n 290 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE---VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN 290 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE---eeeecChHHhCceeeccCCCCccccCCCCCccc
Confidence 35567777787 55433222 222245678999998765432 122222335689999999999999998765543
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+....-.-+.-.|+.++-. .+.|++.|+|.||.-+..+|..+|+ |+++|+.+++-+
T Consensus 291 ~~nA~DaVvQfAI~~Lgf~----~edIilygWSIGGF~~~waAs~YPd--VkavvLDAtFDD 346 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVLGFR----QEDIILYGWSIGGFPVAWAASNYPD--VKAVVLDATFDD 346 (517)
T ss_pred chHHHHHHHHHHHHHcCCC----ccceEEEEeecCCchHHHHhhcCCC--ceEEEeecchhh
Confidence 3333222233344444433 6689999999999999999999999 999999987654
No 145
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.21 E-value=7.7e-09 Score=81.56 Aligned_cols=208 Identities=13% Similarity=0.246 Sum_probs=128.4
Q ss_pred ceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCccc--cHHHHHHHHhhCCcEEEEecCCCC--cCCC------
Q 020633 31 GKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDTGW--MFQKICISFATWGYAVFAADLLGH--GRSD------ 98 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~--G~s~------ 98 (323)
+...+.. ++ ++- ..|.+. .++.+..||++||.+.+..| ....+...|.+.||.++++.+|.- ....
T Consensus 63 e~~~L~~-~~~~fl-aL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 63 EVQWLQA-GEERFL-ALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred hcEEeec-CCEEEE-EEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 3344444 44 443 334443 34678899999999987642 456677889999999999998871 1110
Q ss_pred ------C--C--cc--------------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC
Q 020633 99 ------G--I--RC--------------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 99 ------~--~--~~--------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
+ . .. .....+.+..-+.+++..+.... ..+++|+||+.|+..++.+....+..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCc
Confidence 0 0 00 00012334455666666666653 33499999999999999999997765
Q ss_pred ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH
Q 020633 155 TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 155 ~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
.++++|++++.......
T Consensus 218 ~~daLV~I~a~~p~~~~--------------------------------------------------------------- 234 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDR--------------------------------------------------------------- 234 (310)
T ss_pred ccCeEEEEeCCCCcchh---------------------------------------------------------------
Confidence 58999999986432210
Q ss_pred HHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH---HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL---LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
...+.+.+.++++|||=|++.+...+ ...+.. ..++....+.+-+.+.+..|... ...+.+.+.|..||
T Consensus 235 --n~~l~~~la~l~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL 306 (310)
T PF12048_consen 235 --NPALAEQLAQLKIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWL 306 (310)
T ss_pred --hhhHHHHhhccCCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHH
Confidence 00134566778999999998873322 222211 12222223445556666555443 33344999999999
Q ss_pred HHH
Q 020633 312 DER 314 (323)
Q Consensus 312 ~~~ 314 (323)
+++
T Consensus 307 ~~~ 309 (310)
T PF12048_consen 307 KRH 309 (310)
T ss_pred Hhh
Confidence 875
No 146
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.15 E-value=6.8e-08 Score=79.37 Aligned_cols=122 Identities=11% Similarity=0.066 Sum_probs=75.1
Q ss_pred cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCc----EEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGY----AVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
+..+++|.|.+ .++.|+|+++||............++.|...|. .++.+|..+... ..... ..-..+.+.+
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~--R~~el-~~~~~f~~~l 269 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTH--RSQEL-PCNADFWLAV 269 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCccc--ccccC-CchHHHHHHH
Confidence 67778888864 245799999999653222123344556655553 467777532111 11111 1112222222
Q ss_pred -HHHHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 115 -LSFFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 115 -~~~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++-++...+.+ +..+.+|+|+||||..|+.++.++|+. +.+++.+++..
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~-Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPER-FGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCccc-ccEEEEeccce
Confidence 3334444444332 356789999999999999999999999 99999998753
No 147
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.12 E-value=7.6e-11 Score=87.02 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=57.4
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcE---EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.||||+||.+++....|..+++.|.++||. ++++++-....+...... ....+.+..+.++|+.+...-+ . +|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~TG--a-kV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYTG--A-KV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhhC--C-EE
Confidence 589999999986555899999999999999 799998543332211111 0123345778888888776543 5 99
Q ss_pred EEEEechhHHHHHHHhhh
Q 020633 133 FLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~ 150 (323)
-||||||||.++..+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999999887754
No 148
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.10 E-value=1.3e-09 Score=89.29 Aligned_cols=250 Identities=11% Similarity=0.050 Sum_probs=155.5
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
.|+..++..++...++.|| +|+|.+.+.. ..++.|++|+--|+..-+ ...|......+.++|...+..+.||=|+=.
T Consensus 386 ~FDa~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 386 QFDADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred CcCccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 4556678888999999999 9999998621 123567777655543221 224555557777899999999999987764
Q ss_pred CC---cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 99 GI---RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 99 ~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.. ...-.+-+...+|+.++.+.|..+.-..++++.+.|-|-||.+.-....++|+. +.++|+-.|..++-.....
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel-fgA~v~evPllDMlRYh~l- 543 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL-FGAAVCEVPLLDMLRYHLL- 543 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh-hCceeeccchhhhhhhccc-
Confidence 21 111124456678899999988877554566899999999999998888899998 9888888887664321100
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccc--cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC--CCcCE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK--VTVPF 251 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~ 251 (323)
.....+...+ -.++.....+..... ...++. .=.|+
T Consensus 544 -------------------~aG~sW~~EYG~Pd~P~d~~~l~~YSP---------------------y~nl~~g~kYP~~ 583 (648)
T COG1505 544 -------------------TAGSSWIAEYGNPDDPEDRAFLLAYSP---------------------YHNLKPGQKYPPT 583 (648)
T ss_pred -------------------ccchhhHhhcCCCCCHHHHHHHHhcCc---------------------hhcCCccccCCCe
Confidence 0000111000 011111111211110 111221 12479
Q ss_pred EEEeeCCCcccCchhHHHHHHHcCCCCccEEEe--cCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIY--DGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
||-.+..|.-|.+..++.++.++...+.....+ -++||..--. ......-...+..||.+.+
T Consensus 584 LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~--~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 584 LITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAP--TAEIARELADLLAFLLRTL 647 (648)
T ss_pred EEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCC--hHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988885333444444 3689988721 1111223445667777654
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.09 E-value=1.9e-08 Score=73.73 Aligned_cols=110 Identities=13% Similarity=0.039 Sum_probs=79.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCC-----cEEEEecCCCC----cCCCCC----------cccCCChHHHhhcHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWG-----YAVFAADLLGH----GRSDGI----------RCYLGDMEKVAASSL 115 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~~----------~~~~~~~~~~~~d~~ 115 (323)
.-+.|||||.+++.+ ....++..|...+ --++.+|--|- |.-+.. .....+..++...+.
T Consensus 45 ~iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 347899999999988 7888888887763 23566666552 111111 111235677789999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCccc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFV 167 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~ 167 (323)
.++.+|..++. -.++.++||||||.-...++..+... .++.+|.+++...
T Consensus 124 ~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999999987 56899999999999999998875321 1888888876654
No 150
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.08 E-value=4.1e-09 Score=81.00 Aligned_cols=117 Identities=18% Similarity=0.176 Sum_probs=83.9
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..++.+.. |+ .|-.....-++..+...||+.-|.++..+..+ ..+.+.....|-.|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~- 189 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP- 189 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-
Confidence 34444544 66 76655555444467889999999886544211 12233333347899999999999998765
Q ss_pred cCCChHHHhhcHHHHHHHHHhcC-CCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSE-PYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+.++++.|..+.++++..+. ++...++++.|||+||.++..++.++
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56999999999999998643 33467899999999999998866654
No 151
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.07 E-value=2e-10 Score=90.99 Aligned_cols=115 Identities=14% Similarity=0.095 Sum_probs=70.2
Q ss_pred CcceEEEEecCCCCCc-cc-cHHHHHHHH-hh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDT-GW-MFQKICISF-AT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-~~-~~~~~~~~l-~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 127 (323)
..+|++|++|||.++. .. ....+.+.+ .. .++.||++|+...-... -.............+..+|+.|....+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5689999999998776 22 334455544 44 47999999996332211 0000112344556677777777754444
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCC-CceeEEEEccCcccC
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVI 168 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~~ 168 (323)
+.++++|||||+||++|-.++..... .+|..|+.++|+...
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 57799999999999999988887666 239999999987654
No 152
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.04 E-value=9.8e-10 Score=90.10 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=74.4
Q ss_pred ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+.|..+++.|.+.||.+ ..|++|+|.+.... ...++..+++.++++.+....+ ..+++|+||||||.++..++.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHH
Confidence 48999999999999865 88999999986542 2456777888888888776654 568999999999999999998
Q ss_pred hcCCC---ceeEEEEccCcccC
Q 020633 150 QSEPN---TWTGLIFSAPLFVI 168 (323)
Q Consensus 150 ~~p~~---~v~~~vl~~~~~~~ 168 (323)
.+|+. .|+++|+++++..-
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCC
Confidence 87753 27888988876543
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.99 E-value=3.7e-09 Score=79.88 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=73.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCc--EEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGY--AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
+.+.++||+||+..+........++....-++ .++.+.+|+.|.-..-.....+...-...+..+|+.+....+ ..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~--~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG--IK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC--Cc
Confidence 45789999999987643122222222222223 799999998876432111112344556778888888877643 66
Q ss_pred CeEEEEechhHHHHHHHhhh----cCC----CceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQ----SEP----NTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~----~p~----~~v~~~vl~~~~~~ 167 (323)
+|+|++||||+.+.+.+... .+. ..+..+++.+|-.+
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999998887654 111 13788899887654
No 154
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.98 E-value=4.3e-08 Score=79.52 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=68.2
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
.+...| +.|+.|+.+.+. ..+....++++.......+++.+....+..+ +.+|+|.|.||..++.+|+.+|+
T Consensus 92 evG~AL-~~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 92 EVGVAL-RAGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHHH-HcCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcC
Confidence 344455 458999888765 2233334888888888899999888776333 89999999999999999999999
Q ss_pred CceeEEEEccCcccCCC
Q 020633 154 NTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~~~ 170 (323)
. +.-+|+.+++.+...
T Consensus 164 ~-~gplvlaGaPlsywa 179 (581)
T PF11339_consen 164 L-VGPLVLAGAPLSYWA 179 (581)
T ss_pred c-cCceeecCCCccccc
Confidence 8 888888877766655
No 155
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.97 E-value=2.3e-07 Score=66.70 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=78.4
Q ss_pred ceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCCC----CcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 55 KATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLLG----HGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 55 ~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+-.|||+.|++..- -.+-..+...|-+.+|..+-+-++. +|.+ ++.+-++|+..+++++.....
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~f-- 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGF-- 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCc--
Confidence 46899999998542 2255778889989999999888763 3333 667778999999998876543
Q ss_pred CCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCC
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~ 169 (323)
...|+++|||-|+.=.+.|... .-++.+++.|+.+|..+..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 4489999999999988888733 2223388888888876643
No 156
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.93 E-value=1.2e-08 Score=79.13 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=75.1
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCC----cEEEEecCCCCcCCCC---------C-cc
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWG----YAVFAADLLGHGRSDG---------I-RC 102 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~---------~-~~ 102 (323)
...+.+|.|.+ .++.|+|+++||..... .+........+...| ..+++++..+.+.... . ..
T Consensus 7 ~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (251)
T PF00756_consen 7 DRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRAD 86 (251)
T ss_dssp EEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCT
T ss_pred eEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccc
Confidence 56677777765 35679999999962211 111222333333332 4566666655541110 0 00
Q ss_pred cCCChHHHhhcH-HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 103 YLGDMEKVAASS-LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 103 ~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.......+.+.+ .+++..+...+.....+..|+|+||||..|+.++.++|+. +.++++++|....
T Consensus 87 ~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~-F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 87 DSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL-FGAVIAFSGALDP 152 (251)
T ss_dssp STTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT-ESEEEEESEESET
T ss_pred cCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc-cccccccCccccc
Confidence 011122222222 2444555555443344489999999999999999999999 9999999987654
No 157
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.90 E-value=1.5e-07 Score=70.94 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=66.1
Q ss_pred EecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEe
Q 020633 60 MTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGE 137 (323)
Q Consensus 60 ~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 137 (323)
++|+.+ ++.. .|..+...|... +.|+++|.+|++.+.... .+++.+++.+...+.... + ..+++++||
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~---~--~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGR-RDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA---G--GRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCC-ccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc---C--CCCeEEEEE
Confidence 445543 3334 788888888764 999999999998664332 256666655544444322 1 447999999
Q ss_pred chhHHHHHHHhhh---cCCCceeEEEEccCcc
Q 020633 138 SMGGAATMLMYFQ---SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 138 S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~ 166 (323)
|+||.++...+.. .+.. +.+++++++..
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~-~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIP-PAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCC-CcEEEEEccCC
Confidence 9999999888876 3445 88888877543
No 158
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.89 E-value=1.6e-08 Score=84.66 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=89.3
Q ss_pred ceeEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH-------------------HHhhCCcEEE
Q 020633 31 GKKYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-------------------SFATWGYAVF 87 (323)
Q Consensus 31 ~~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~-------------------~l~~~g~~v~ 87 (323)
..-++... .+ .++|+.+...+ .+.+|+||++.|++|.++ .+-.+.+ .+.+. ..++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccc-cceE
Confidence 34455555 55 99999998765 356899999999998776 5533321 12222 6899
Q ss_pred EecCC-CCcCCCCCcc--cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CCC
Q 020633 88 AADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EPN 154 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~~ 154 (323)
.+|.| |.|.|..... ...+.++.++|+..+|+..-.+.+ ....+++|.|.|+||..+-.+|.. . +..
T Consensus 90 ~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~i 169 (415)
T PF00450_consen 90 FIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKI 169 (415)
T ss_dssp EE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTS
T ss_pred EEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccc
Confidence 99966 8999974433 344778889999999887766654 334589999999999887666654 2 134
Q ss_pred ceeEEEEccCcccC
Q 020633 155 TWTGLIFSAPLFVI 168 (323)
Q Consensus 155 ~v~~~vl~~~~~~~ 168 (323)
+++++++.++..+.
T Consensus 170 nLkGi~IGng~~dp 183 (415)
T PF00450_consen 170 NLKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEEESE-SBH
T ss_pred ccccceecCccccc
Confidence 58999999987654
No 159
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.88 E-value=1.2e-07 Score=67.57 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=78.6
Q ss_pred cEEEEEecCCCC---CcceEEEEecCCCCCccccHH--HHHHHHhhCCcEEEEecCCCCcCCC-CCcccC----------
Q 020633 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQ--KICISFATWGYAVFAADLLGHGRSD-GIRCYL---------- 104 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~---------- 104 (323)
.+.+-+|.|+.. ++-|++.++-|+..+...... .+-+..+++|+.|+.+|---.|..- +..+..
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYv 106 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYV 106 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEE
Confidence 566677777642 346899999999877541211 2334445679999999964333221 000000
Q ss_pred -CChHHHh-------hcHHHHHHHHH-hcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 105 -GDMEKVA-------ASSLSFFKHVR-DSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 105 -~~~~~~~-------~d~~~~l~~l~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+.+-|. --+.++.+.+. ...+++..++.+.||||||.-|+..+.+.|.+ .+++-..+|.....
T Consensus 107 nAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~k-ykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 107 NATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSK-YKSVSAFAPICNPI 179 (283)
T ss_pred ecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCccc-ccceeccccccCcc
Confidence 0111111 11223333333 23345677899999999999999999999998 88888888776543
No 160
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=1e-07 Score=79.07 Aligned_cols=146 Identities=13% Similarity=0.073 Sum_probs=102.3
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
.++......+++.+.+.|| .+...+..... .+++|.+|..+|.-+-+ ...|..-...|.++|+.....|.||=|.
T Consensus 433 g~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe 512 (712)
T KOG2237|consen 433 GFDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGE 512 (712)
T ss_pred cccccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcc
Confidence 3444456778899999999 76655544322 25788888888765322 2234433344667899999999999776
Q ss_pred CCC---CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 97 SDG---IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 97 s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
-.. ..+....-.+..+|+.+..++|....-..+.+..+.|.|.||.++..++..+|+. +.++|+-.|+.++
T Consensus 513 ~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL-F~avia~VpfmDv 586 (712)
T KOG2237|consen 513 YGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL-FGAVIAKVPFMDV 586 (712)
T ss_pred cccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH-hhhhhhcCcceeh
Confidence 542 1222222344557777777887776555577999999999999999999999999 9999998887664
No 161
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.85 E-value=3.8e-07 Score=76.32 Aligned_cols=141 Identities=13% Similarity=0.085 Sum_probs=95.5
Q ss_pred cccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-- 100 (323)
...+++..+..|| +|...+.-..+ .++.|++|+.-|.-+.+ ...|....-.|.++|+.....-.||=|.-...
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WY 496 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWY 496 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHH
Confidence 3345566666888 77666544322 25678888877764432 22444445567789998877888887665421
Q ss_pred -cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 101 -RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+....-..-..|+.+..++|..+.-.+...++++|-|.||++.-..+...|+. ++++|+-.|+.+.-
T Consensus 497 e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l-f~~iiA~VPFVDvl 565 (682)
T COG1770 497 EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL-FAGIIAQVPFVDVL 565 (682)
T ss_pred HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh-hhheeecCCccchh
Confidence 111112223345666677777666555567899999999999999999999999 99999999988754
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=98.84 E-value=3.9e-07 Score=62.47 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=58.7
Q ss_pred EEEecCCCCCccccHHH-H-HHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 58 VYMTHGYGSDTGWMFQK-I-CISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~-~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
||++||+.++.. .... + .+.+.. |.|-.+.+..... .+....++.+..++...+.+ ...++
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~--------~~~~i~y~~p~l~--h~p~~a~~ele~~i~~~~~~------~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDE--------DVRDIEYSTPHLP--HDPQQALKELEKAVQELGDE------SPLIV 64 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhc--------cccceeeecCCCC--CCHHHHHHHHHHHHHHcCCC------CceEE
Confidence 899999988655 3332 2 222322 3333333433222 26788888888888887644 47999
Q ss_pred EechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
|.|+||+.|..++.++. +++ |+++|...
T Consensus 65 GssLGGY~At~l~~~~G---ira-v~~NPav~ 92 (191)
T COG3150 65 GSSLGGYYATWLGFLCG---IRA-VVFNPAVR 92 (191)
T ss_pred eecchHHHHHHHHHHhC---Chh-hhcCCCcC
Confidence 99999999999998875 333 45666654
No 163
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.81 E-value=4.1e-07 Score=72.50 Aligned_cols=70 Identities=24% Similarity=0.352 Sum_probs=54.6
Q ss_pred CCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 245 SKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 245 ~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.++. +|+|+++|.+|..+|......++........+...+++++|...... ....++..+.+.+|+.+.+
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 3444 79999999999999999999998887543467888888999888422 2334568889999998764
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.74 E-value=1.2e-06 Score=69.67 Aligned_cols=109 Identities=15% Similarity=0.112 Sum_probs=71.5
Q ss_pred CcceEEEEecCCCCCccc---c---HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTGW---M---FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~---~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
++.|+||++||+|-.-.. . ...+...| + ...++++|+.-...- .. ...+.....++.+..+++....+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~--~~--~~~yPtQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSD--EH--GHKYPTQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccc--cC--CCcCchHHHHHHHHHHHHHhccC
Confidence 457999999999843221 1 11222333 3 368999998744300 11 12455566777788888874443
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhc----CCCceeEEEEccCcccCC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~~~ 169 (323)
...|+|+|-|.||.+++.+.... +..-.+++|+++|+..+.
T Consensus 194 --~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 --NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred --CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 56899999999999998876541 111268999999998865
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.73 E-value=3.6e-08 Score=84.30 Aligned_cols=120 Identities=18% Similarity=0.130 Sum_probs=75.6
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCC---ccccHHHHHHHHhhC--CcEEEEecCC-C---CcCCCCCcccCCChH
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSD---TGWMFQKICISFATW--GYAVFAADLL-G---HGRSDGIRCYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~~--g~~v~~~d~~-G---~G~s~~~~~~~~~~~ 108 (323)
-|+..+|.|.. .++.|+||++||++.. .. .+ ....|+.. |+.|+++++| | +..+... . ..-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~--~~~n 151 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-E--LPGN 151 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccccCCCC-C--CCcc
Confidence 56667777754 2567999999997632 22 11 22334433 3999999999 3 2222111 1 1112
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
.-..|...++++++.. .+.++.+|.|+|+|.||..+..++.. .+.. ++++|+.++...
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~l-f~~~i~~sg~~~ 214 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGL-FHRAISQSGSAL 214 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHH-HHHHhhhcCCcc
Confidence 2245666666666543 34567899999999999998887765 2334 888888776543
No 166
>PLN02209 serine carboxypeptidase
Probab=98.72 E-value=2.9e-06 Score=70.24 Aligned_cols=134 Identities=13% Similarity=0.137 Sum_probs=84.0
Q ss_pred eEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH----------------H-------HhhCCcE
Q 020633 33 KYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI----------------S-------FATWGYA 85 (323)
Q Consensus 33 ~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~----------------~-------l~~~g~~ 85 (323)
.++... .+ .++|+.+.... ....|+|+++-|++|.++ .+..+.+ . +.+. ..
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-an 119 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-AN 119 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-Cc
Confidence 344443 35 78888877654 245799999999987765 3322211 1 1122 57
Q ss_pred EEEecCC-CCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CC
Q 020633 86 VFAADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 86 v~~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
++.+|.| |.|.|-.... ...+-++.++|+..+++..-...+ ....+++|.|.|+||..+-.+|.. . +.
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 8999955 8888853321 112333455777777776554443 234589999999999876666543 1 12
Q ss_pred CceeEEEEccCcccC
Q 020633 154 NTWTGLIFSAPLFVI 168 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~ 168 (323)
-+++++++.++..+.
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 248899999887653
No 167
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.69 E-value=1.7e-05 Score=65.25 Aligned_cols=139 Identities=16% Similarity=0.137 Sum_probs=88.6
Q ss_pred ccceeEEEcC--CC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHh----h-C-------------CcEE
Q 020633 29 RNGKKYFETP--NG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFA----T-W-------------GYAV 86 (323)
Q Consensus 29 ~~~~~~~~~~--~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~----~-~-------------g~~v 86 (323)
+....++... .+ .|+|+.+..... ..+|.||.+-|++|.++ .. .+..++. + . --.+
T Consensus 43 ~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNi 120 (454)
T KOG1282|consen 43 KQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANI 120 (454)
T ss_pred ccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcceeCCccccccccE
Confidence 3344556555 56 999999887653 55899999999998765 22 2222221 0 1 1368
Q ss_pred EEecCC-CCcCCCCCcc--cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CC
Q 020633 87 FAADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 87 ~~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
+.+|.| |.|.|-.... ...+-+..++|+..++...-.+.+ ....++.|.|.|++|...-.+|.. + |.
T Consensus 121 LfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~ 200 (454)
T KOG1282|consen 121 LFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPN 200 (454)
T ss_pred EEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCc
Confidence 888988 7777753222 112445556777666654433433 446689999999999776666654 2 22
Q ss_pred CceeEEEEccCcccCC
Q 020633 154 NTWTGLIFSAPLFVIP 169 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~~ 169 (323)
-+++|+++-+|..+..
T Consensus 201 iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 201 INLKGYAIGNGLTDPE 216 (454)
T ss_pred ccceEEEecCcccCcc
Confidence 3489999988876543
No 168
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.68 E-value=8.8e-06 Score=67.44 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=82.8
Q ss_pred ceeEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHH---H-------------HH-------hhCC
Q 020633 31 GKKYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKIC---I-------------SF-------ATWG 83 (323)
Q Consensus 31 ~~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~---~-------------~l-------~~~g 83 (323)
...++... .+ .++|+.+...+ ....|+||++-|++|.++ ....+. . .| .+.
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS-~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~- 115 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSC-LGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM- 115 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHH-HHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-
Confidence 34455553 35 78888877654 246799999999987665 221111 1 11 122
Q ss_pred cEEEEecCC-CCcCCCCCcccCC-ChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----
Q 020633 84 YAVFAADLL-GHGRSDGIRCYLG-DMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S----- 151 (323)
Q Consensus 84 ~~v~~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~----- 151 (323)
..++.+|.| |.|.|........ +-.+.++++..+++..-...+ ....+++|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 578999955 8898864322111 112334666666665443333 235689999999999876666553 1
Q ss_pred CCCceeEEEEccCcccC
Q 020633 152 EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 152 p~~~v~~~vl~~~~~~~ 168 (323)
+.-+++|+++.+|....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 22248999999886543
No 169
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.68 E-value=1e-05 Score=64.71 Aligned_cols=133 Identities=17% Similarity=0.188 Sum_probs=81.8
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcc-------
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-MFQKICISFATW-GYAVFAADLLGHGRSDGIRC------- 102 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------- 102 (323)
+.+-.... +|.|+..-+.....+..|+++.|+|++... .+..+.+.+++. +..|+.+++-|+|..+....
T Consensus 12 vELgikR~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~ 91 (403)
T PF11144_consen 12 VELGIKRESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDI 91 (403)
T ss_pred eeecccccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHH
Confidence 33444445 788888666554678899999999988652 456677778776 33455566666654321000
Q ss_pred -----------------cCC---ChHHH-------------------------------------------hhcHHHHHH
Q 020633 103 -----------------YLG---DMEKV-------------------------------------------AASSLSFFK 119 (323)
Q Consensus 103 -----------------~~~---~~~~~-------------------------------------------~~d~~~~l~ 119 (323)
... ..... +-|+..++.
T Consensus 92 D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~ 171 (403)
T PF11144_consen 92 DKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALL 171 (403)
T ss_pred HHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHH
Confidence 000 11111 223333344
Q ss_pred HHHhcCCCCC--CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 120 HVRDSEPYRD--LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 120 ~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
++....+... -|++++|+|.||++|...|.-.|-. +++++=-+++.
T Consensus 172 ~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~-~~~~iDns~~~ 219 (403)
T PF11144_consen 172 DLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL-FDGVIDNSSYA 219 (403)
T ss_pred HHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc-eeEEEecCccc
Confidence 4433333222 4999999999999999999888987 88887666544
No 170
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.67 E-value=1.1e-07 Score=71.51 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=52.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
++.-.|||+||+.++.. .|..+...+... .+.-..+...++.... ......++..++.+..-|............
T Consensus 2 ~~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 44679999999999876 777776666551 1221122222221111 111124555555544333333322221134
Q ss_pred CeEEEEechhHHHHHHHhh
Q 020633 131 PGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~ 149 (323)
++.++||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999866554
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=98.66 E-value=2.7e-06 Score=65.40 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=66.6
Q ss_pred ceEEEEecCCCCC--ccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSD--TGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
..+||+.||+|.+ .. .+..+.+.+.+. |+-+..+. .|-+. .......+.+.++.+.+.+...... ..-
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L----~~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL----SEG 96 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh----cCc
Confidence 4689999999943 33 566777777422 66555554 23221 1122234555555555555443322 225
Q ss_pred eEEEEechhHHHHHHHhhhcCC-CceeEEEEccCccc
Q 020633 132 GFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFV 167 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~ 167 (323)
+.++|+|.||.++-.++.+.|+ .+|+.+|.+++...
T Consensus 97 ~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999999999877 45999999876543
No 172
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.65 E-value=8.2e-07 Score=68.24 Aligned_cols=229 Identities=12% Similarity=0.029 Sum_probs=112.7
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
++|++=||.+..........+...+.|+.++.+-.+-....... ......++.+.+.+...... +..++++-.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~---~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSA---SPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccC---CCCCEEEEE
Confidence 35666677655443556666666678999999876532211111 12333333333333332222 123899999
Q ss_pred echhHHHHHHHhhh-----c----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 137 ESMGGAATMLMYFQ-----S----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~-----~----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+|.||...+..... . +-.+++++|+.+++.......... .+...+......+ .. ...
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~----~~~~~~~~~~~~~-------~~---~~~ 139 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSAR----AFSAALPKSSPRW-------FV---PLW 139 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHH----HHHHHcCccchhh-------HH---HHH
Confidence 99988776655431 1 111289999887765433211100 0000000000000 00 000
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEec
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYD 285 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 285 (323)
......+....................+..+ ........+|-|+++++.|.+++.+.+++..+... +-+++...++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~ 217 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGYPDVQEYYRRALN--DFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE 217 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh--hhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC
Confidence 0000000000000000000000001111111 11223457899999999999999998888776653 2347788889
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHH
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.|..++ ....++.++.+.+|+
T Consensus 218 ~S~HV~H~---r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 218 DSPHVAHL---RKHPDRYWRAVDEFW 240 (240)
T ss_pred CCchhhhc---ccCHHHHHHHHHhhC
Confidence 99999985 344566777777763
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.63 E-value=4.1e-07 Score=70.78 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=74.3
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCC--cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+.++||+||+..+-...-...++-....| ...+.+-+|..|.--+-.....+.+.-..+++.+|+.|..+.+ ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--Cc
Confidence 3478999999998543212223333333333 4678888887765432211112445556889999999998865 66
Q ss_pred CeEEEEechhHHHHHHHhhhc--------CCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~vl~~~~~~ 167 (323)
+|+|++||||..+++....+. +.+ ++-+|+.+|-.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~k-i~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAK-IKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhh-hhheEeeCCCCC
Confidence 899999999999998776541 223 778888887554
No 174
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=3.3e-06 Score=62.58 Aligned_cols=251 Identities=12% Similarity=-0.026 Sum_probs=124.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH----H
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL----S 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~----~ 116 (323)
+-++..+.|. +..+.-|++-|-|.+....-..+...+.++|...+.+.-|-+|...........++ .+.|+. +
T Consensus 101 ~A~~~~liPQ--K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le-~vtDlf~mG~A 177 (371)
T KOG1551|consen 101 TARVAWLIPQ--KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLE-YVTDLFKMGRA 177 (371)
T ss_pred ceeeeeeccc--CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHH-HHHHHHHhhHH
Confidence 5556666664 34455555555554432111135566778889999999999998765433221222 223322 1
Q ss_pred HHHH----HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 117 FFKH----VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 117 ~l~~----l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
.|+. +.......-.+..++|-||||.+|......++.. |.-+=++++.......... .+......+.++...
T Consensus 178 ~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P-va~~p~l~~~~asvs~teg--~l~~~~s~~~~~~~~- 253 (371)
T KOG1551|consen 178 TIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP-VATAPCLNSSKASVSATEG--LLLQDTSKMKRFNQT- 253 (371)
T ss_pred HHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC-ccccccccccccchhhhhh--hhhhhhHHHHhhccC-
Confidence 2222 2111111245899999999999999988877665 5444444332111100000 000000111111100
Q ss_pred ccCCcccccccccCCh--HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-----EEEEeeCCCcccCch
Q 020633 193 AAMPDNKMVGKAIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-----FLTVHGTADGVTCPT 265 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~ 265 (323)
. .......+.+ ......+... +..-.....+.+...+--..+....+| +.++.+++|..+|..
T Consensus 254 ---t--~~~~~~~r~p~Q~~~~~~~~~s-----rn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~ 323 (371)
T KOG1551|consen 254 ---T--NKSGYTSRNPAQSYHLLSKEQS-----RNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRT 323 (371)
T ss_pred ---c--chhhhhhhCchhhHHHHHHHhh-----hcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcccccc
Confidence 0 0000000000 0000000000 000111111222111101122333333 577889999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCccccc-CCCchhHHHHHHHHHHHHHHHH
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQ-GEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+..+.+.. |++++..++ .||...+ .+.+. +.+.|.+-|++..
T Consensus 324 gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dl----fRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 324 GVRSLQEIW--PGCEVRYLE-GGHVSAYLFKQDL----FRRAIVDGLDRLD 367 (371)
T ss_pred CcHHHHHhC--CCCEEEEee-cCceeeeehhchH----HHHHHHHHHHhhh
Confidence 999999999 899999999 5896653 33333 7777888887765
No 175
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.60 E-value=7e-07 Score=74.95 Aligned_cols=112 Identities=20% Similarity=0.183 Sum_probs=73.2
Q ss_pred ceEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcc------cCCChHHHhhcHHHHHHHHHhcCC
Q 020633 55 KATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRC------YLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
+|++|++-|=+.-.. +....+...|+++ |-.+++++.|-+|.|.+... ...+.++..+|+..++++++.+..
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 667777755442221 1222344555554 77899999999999974321 124789999999999999996642
Q ss_pred -CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 127 -YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 127 -~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+..|++++|-|+||.+|..+-.++|+. |.+.+..+++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~-~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHL-FDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT--SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCe-eEEEEeccceee
Confidence 2356999999999999999999999999 988888776654
No 176
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.59 E-value=3.3e-07 Score=74.36 Aligned_cols=122 Identities=18% Similarity=0.138 Sum_probs=77.6
Q ss_pred cEEEEEecCC-CCCcceEEEEecCCCC---Ccc-ccHHHHHHHHhhCC-cEEEEecCCC--CcCCCC---C--cccCCCh
Q 020633 41 KLFTQSFLPL-DQKVKATVYMTHGYGS---DTG-WMFQKICISFATWG-YAVFAADLLG--HGRSDG---I--RCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~-~~~~~~~vv~~HG~~~---~~~-~~~~~~~~~l~~~g-~~v~~~d~~G--~G~s~~---~--~~~~~~~ 107 (323)
=|+..+|.|. +.++.|++|+|||++. +.. ..|+ ...|+++| +.|+++++|- .|.-.. . ... .-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~--~~ 154 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAF--AS 154 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccc--cc
Confidence 4777888888 5567899999999863 222 1233 45688887 9999999992 122110 0 111 01
Q ss_pred HHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCccc
Q 020633 108 EKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~ 167 (323)
.--..|....|++++.. .+.|+..|.|+|+|.||+.++.+.+. |.. -++++|+.++...
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 12235566666666543 34568899999999999988776654 431 1666777777664
No 177
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.54 E-value=3.9e-07 Score=69.30 Aligned_cols=108 Identities=15% Similarity=0.051 Sum_probs=55.5
Q ss_pred cceEEEEecCCCCCcc--ccHHHHHHHHhh--CCcEEEEecCCCCcCC-CCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 54 VKATVYMTHGYGSDTG--WMFQKICISFAT--WGYAVFAADLLGHGRS-DGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~--~~~~~~~~~l~~--~g~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+..+||+.||+|.+.. ..+..+.+.+.+ -|.-|.+++.- -+.+ +.......++.+.++.+.+.++....-
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L---- 78 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPEL---- 78 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG----
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhh----
Confidence 3568999999996531 134444433322 26778888763 2221 111112223455555555555443322
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..-+.++|+|.||.++-.++.+.+...|+.+|.+++..
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 23599999999999999999998776699999987654
No 178
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=3.3e-07 Score=73.53 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=72.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcE---EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
.-+++++||++.+.. .|..+...+...|+. ++.+++++- .. .. +.....+.+...++.+....+ ..+
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~--~~----~~~~~~~ql~~~V~~~l~~~g--a~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG-DG--TY----SLAVRGEQLFAYVDEVLAKTG--AKK 128 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc-CC--Cc----cccccHHHHHHHHHHHHhhcC--CCc
Confidence 459999999976666 777777778777887 888888855 11 11 222223334444444333322 358
Q ss_pred eEEEEechhHHHHHHHhhhcC--CCceeEEEEccCcccC
Q 020633 132 GFLFGESMGGAATMLMYFQSE--PNTWTGLIFSAPLFVI 168 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p--~~~v~~~vl~~~~~~~ 168 (323)
+.++||||||.++..++...+ .. |+.++.++++...
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~-V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANR-VASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccce-EEEEEEeccCCCC
Confidence 999999999999998888877 66 9999999876553
No 179
>COG0627 Predicted esterase [General function prediction only]
Probab=98.49 E-value=1.3e-05 Score=63.26 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=69.5
Q ss_pred CcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCC--------------CCcCCCC------Cccc-CCChHH
Q 020633 53 KVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLL--------------GHGRSDG------IRCY-LGDMEK 109 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~------~~~~-~~~~~~ 109 (323)
.+-|+++++||..++.. .....+-+.....|+.++++|-. |-+.|-. .... .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 45688999999987732 23334445555668888886433 2222210 0000 123444
Q ss_pred Hh-hcHHHHHHHHHhcCCCCC--CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 110 VA-ASSLSFFKHVRDSEPYRD--LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 110 ~~-~d~~~~l~~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
++ +++-+.++... +.+. .+..++||||||.-|+.+|.++|++ ++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f---~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAF---PADGTGDGRAIAGHSMGGYGALKLALKHPDR-FKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhc---CcccccCCceeEEEeccchhhhhhhhhCcch-hceecccccccccc
Confidence 33 34443333222 1112 2679999999999999999999998 99999999887655
No 180
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.47 E-value=2e-05 Score=62.36 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=77.4
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.|....+....+++...-||+.|=|+-.. .-..+.+.|.++|+.|+.+|-.=|-+|.. +.++.+.|+..++++
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~ 318 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRF 318 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHH
Confidence 44444444332245677788888776655 56778999999999999999665555532 678899999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
...+.+ ..+++|+|+|+|+-+.-....+.|.
T Consensus 319 y~~~w~--~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 319 YARRWG--AKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHhhC--cceEEEEeecccchhhHHHHHhCCH
Confidence 888765 7799999999999887665555443
No 181
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.45 E-value=8.6e-06 Score=62.73 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=67.8
Q ss_pred ceEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
..++|+.||+|.+.. .....+.+.+... |..+.++.. |.+ ........+.+.++.+.+.+...... ..-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l----~~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL----SQGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh----hCcE
Confidence 468899999997643 1444555555332 666666654 332 22333335556566655555553332 2259
Q ss_pred EEEEechhHHHHHHHhhhcCC-CceeEEEEccCcc
Q 020633 133 FLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~ 166 (323)
.++|+|.||.++-.++.+.++ .+|+.+|.+++..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999999877 4599999987654
No 182
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.45 E-value=3.4e-06 Score=61.88 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=49.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEE-EEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAV-FAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
+..|||..|||++.. .+..+. ...++.| +++|+|.. +++ .|+ .. ..++.
T Consensus 11 ~~LilfF~GWg~d~~-~f~hL~---~~~~~D~l~~yDYr~l-----------~~d---~~~--------~~----y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-PFSHLI---LPENYDVLICYDYRDL-----------DFD---FDL--------SG----YREIY 60 (213)
T ss_pred CeEEEEEecCCCChH-Hhhhcc---CCCCccEEEEecCccc-----------ccc---ccc--------cc----CceEE
Confidence 579999999998876 554432 1334654 56788722 111 011 11 34899
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
|+|+|||-.+|..+....+ ++..|.+++.
T Consensus 61 lvAWSmGVw~A~~~l~~~~---~~~aiAINGT 89 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP---FKRAIAINGT 89 (213)
T ss_pred EEEEeHHHHHHHHHhccCC---cceeEEEECC
Confidence 9999999999988765543 5555555543
No 183
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.42 E-value=1.4e-06 Score=75.58 Aligned_cols=123 Identities=17% Similarity=0.079 Sum_probs=71.0
Q ss_pred EEEEEecCCCCC---cceEEEEecCCCCCccc---cHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 42 LFTQSFLPLDQK---VKATVYMTHGYGSDTGW---MFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 42 l~~~~~~~~~~~---~~~~vv~~HG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
|+..+|.|.... +.|++|+|||++...+. ....-...++.++..||++++| |+-.+...... .-..-.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 186 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGL 186 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhh
Confidence 667778777643 46999999998633211 1222234455678999999999 33222111100 112234
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
.|...+|++++.. .+.|+.+|.|+|+|.||..+...+.. .... ++++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL-FHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS-BSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc-cccccccccccc
Confidence 6677777777654 34567799999999999887766655 2345 999999887443
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=1.4e-05 Score=59.65 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=68.6
Q ss_pred eEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 56 ATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 56 ~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.++|++||++..+. .....+.+.+.+. |..|+++|. |-|- .........+.++.+.+.+...... ..-+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~l----sqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPEL----SQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchhc----cCceE
Confidence 58899999997654 2366777777665 889999986 4441 1111123444444444444433322 33589
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
++|.|.||.++-.++..-++.+|+..|.++++.
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999988886666699999887654
No 185
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.28 E-value=1.3e-05 Score=59.66 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=65.8
Q ss_pred CcceEEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC--
Q 020633 53 KVKATVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR-- 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~-- 128 (323)
+++.+|=|+.|.. ......|+.+.+.|+++||.|++.-+.- | -++..--.+........++.+.......
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4677888888863 3344588999999999999999987641 1 0000011222233444555555443221
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.-+++-+|||+|+-+-+.+...++.. -++-++++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~-r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVE-RAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCc-ccceEEEe
Confidence 23788999999999988887776544 45666665
No 186
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.27 E-value=3.1e-06 Score=55.13 Aligned_cols=61 Identities=20% Similarity=0.268 Sum_probs=51.3
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..|+|++.++.|+.+|.+.++.+.+.+ ++..++.+++.||..+. .. ..-+.+.+.+||.+-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~-~~---s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYA-GG---SPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceec-CC---ChHHHHHHHHHHHcC
Confidence 589999999999999999999999999 67899999999999983 12 233677788888643
No 187
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.20 E-value=9e-05 Score=59.52 Aligned_cols=154 Identities=16% Similarity=0.203 Sum_probs=92.5
Q ss_pred CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC-cccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 126 PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP-LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 126 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
+....+++|.|.|==|..++..|+. ..+ |++++-+.- ...+. ..+......+...|......
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa~-D~R-V~aivP~Vid~LN~~---------~~l~h~y~~yG~~ws~a~~d------ 230 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAAV-DPR-VKAIVPIVIDVLNMK---------ANLEHQYRSYGGNWSFAFQD------ 230 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhcc-Ccc-eeEEeeEEEccCCcH---------HHHHHHHHHhCCCCccchhh------
Confidence 3346789999999999999998884 445 888875432 11111 11111111222122221111
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
............+. ...+....+ ......++++|-++|.|..|++..+.....++..+++ ...+..+
T Consensus 231 --------Y~~~gi~~~l~tp~---f~~L~~ivD-P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v 297 (367)
T PF10142_consen 231 --------YYNEGITQQLDTPE---FDKLMQIVD-PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV 297 (367)
T ss_pred --------hhHhCchhhcCCHH---HHHHHHhcC-HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC
Confidence 01111111111111 111111111 1223356799999999999999999999999999964 4678899
Q ss_pred cCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 285 DGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+++|.... ..+.+.+..|+.....
T Consensus 298 PN~~H~~~~-------~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 298 PNAGHSLIG-------SDVVQSLRAFYNRIQN 322 (367)
T ss_pred CCCCcccch-------HHHHHHHHHHHHHHHc
Confidence 999999982 4478889999988654
No 188
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.19 E-value=9.3e-06 Score=66.76 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=63.1
Q ss_pred cHHHHHHHHhhCCcEE-----EE-ecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHH
Q 020633 71 MFQKICISFATWGYAV-----FA-ADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT 144 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a 144 (323)
.|..+++.|.+.||.. .+ +|+|- + .. ..+.+...+...|+...... ..+++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~~---~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---PA---ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---c---hh---hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHH
Confidence 7899999999888742 22 67771 1 11 34567777888888776553 5699999999999999
Q ss_pred HHHhhhcCC-----CceeEEEEccCccc
Q 020633 145 MLMYFQSEP-----NTWTGLIFSAPLFV 167 (323)
Q Consensus 145 ~~~a~~~p~-----~~v~~~vl~~~~~~ 167 (323)
..+....+. ..|+++|.++++..
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 998887643 24999999987654
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.16 E-value=0.0001 Score=55.67 Aligned_cols=45 Identities=11% Similarity=0.177 Sum_probs=37.9
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+...+..+.++-.++|||+||.+++.....+|+. +...++++|..
T Consensus 128 Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~-F~~y~~~SPSl 172 (264)
T COG2819 128 IEARYRTNSERTAIIGHSLGGLFVLFALLTYPDC-FGRYGLISPSL 172 (264)
T ss_pred HhcccccCcccceeeeecchhHHHHHHHhcCcch-hceeeeecchh
Confidence 3334445577899999999999999999999999 99999999864
No 190
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.16 E-value=2.6e-05 Score=66.91 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=63.9
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHh----------------hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFA----------------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++-+|+||+|..|+.. .-+.++.... ...|+.+++|+-+- -..-+..++.+.++-+.+.
T Consensus 88 sGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHH
Confidence 4679999999987754 3333333222 22367777776531 0011112556666666666
Q ss_pred HHHHHhcCC----CC---CCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCcccCCC
Q 020633 118 FKHVRDSEP----YR---DLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 118 l~~l~~~~~----~~---~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~~~ 170 (323)
|+.+...+. .+ +..|+++||||||.+|...+.. .++. |.-++..+++...++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~s-VntIITlssPH~a~P 224 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGS-VNTIITLSSPHAAPP 224 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccch-hhhhhhhcCcccCCC
Confidence 665544322 11 3459999999999999765543 1233 666666666554443
No 191
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.16 E-value=0.00012 Score=55.40 Aligned_cols=116 Identities=6% Similarity=0.002 Sum_probs=79.0
Q ss_pred EEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 44 TQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
+....+....+.|.|+++-...++.....+.-.+.|... ..|+..|+-.-..-+-..+. .+++++++-+.+.+..++.
T Consensus 92 F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~Gp 169 (415)
T COG4553 92 FERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLGP 169 (415)
T ss_pred hhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhCC
Confidence 333444444567888888888887665677778888776 78898888754443333333 3889999999999999864
Q ss_pred cCCCCCCCeEEEEechhH-----HHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 124 SEPYRDLPGFLFGESMGG-----AATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 124 ~~~~~~~~~~l~G~S~Gg-----~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+++++-+.-+ .+++..+...|.. ...+++++++.+..
T Consensus 170 -------~~hv~aVCQP~vPvLAAisLM~~~~~p~~-PssMtlmGgPIDaR 212 (415)
T COG4553 170 -------DAHVMAVCQPTVPVLAAISLMEEDGDPNV-PSSMTLMGGPIDAR 212 (415)
T ss_pred -------CCcEEEEecCCchHHHHHHHHHhcCCCCC-CceeeeecCccccc
Confidence 36777777654 3444444446665 78888888776543
No 192
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.12 E-value=0.00029 Score=56.48 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=56.0
Q ss_pred EEEEecCC-CCcCCCCCcccC-CChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----C
Q 020633 85 AVFAADLL-GHGRSDGIRCYL-GDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----E 152 (323)
Q Consensus 85 ~v~~~d~~-G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p 152 (323)
.++.+|.| |.|.|-...... .+-+..++|+..+++..-...+ ....+++|.|.|+||..+-.+|.. . +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 58899999 888886432211 1223344777777766554443 346689999999999877766654 1 1
Q ss_pred CCceeEEEEccCcccC
Q 020633 153 PNTWTGLIFSAPLFVI 168 (323)
Q Consensus 153 ~~~v~~~vl~~~~~~~ 168 (323)
.-+++|+++-+|+...
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 2248999998887654
No 193
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=98.09 E-value=0.00028 Score=56.52 Aligned_cols=107 Identities=13% Similarity=-0.021 Sum_probs=82.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC--CChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL--GDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+|+..-|.+.............|. -+-+.+++|-++.|.+.+... .++.+.+.|...+++.++.-+ .+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY---~~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY---PG 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc---cC
Confidence 4579999999998654323334444442 346889999999998654322 378889999999999998877 56
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+++--|.|-||+.++.+=.-+|+. |++.|....+.
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~D-VD~tVaYVAP~ 169 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDD-VDGTVAYVAPN 169 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCC-CCeeeeeeccc
Confidence 899999999999998887779998 99999854443
No 194
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.08 E-value=0.00036 Score=53.59 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=64.3
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC----CcEEEEecCCCCcCCCCCcccCCChHHHhhc-HHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW----GYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-SLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~ 127 (323)
.+.|+++++||--....-....+.+.|... .-.++.+|.-.- .......+..+++... ..+++=++...++.
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~---~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~ 172 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDV---KKRREELHCNEAYWRFLAQELLPYVEERYPT 172 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCH---HHHHHHhcccHHHHHHHHHHhhhhhhccCcc
Confidence 568999999986432111122334444443 245666665421 0001111122222222 23344455555442
Q ss_pred --CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 128 --RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+...-+|+|.|+||.+++..+..+|+. +..++..+|...
T Consensus 173 ~~~a~~r~L~G~SlGG~vsL~agl~~Pe~-FG~V~s~Sps~~ 213 (299)
T COG2382 173 SADADGRVLAGDSLGGLVSLYAGLRHPER-FGHVLSQSGSFW 213 (299)
T ss_pred cccCCCcEEeccccccHHHHHHHhcCchh-hceeeccCCccc
Confidence 234568999999999999999999999 999988887654
No 195
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.07 E-value=2.4e-05 Score=62.11 Aligned_cols=110 Identities=16% Similarity=0.212 Sum_probs=78.7
Q ss_pred eEEEEecCCCCCccc------cHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc---------CCChHHHhhcHHHHHHH
Q 020633 56 ATVYMTHGYGSDTGW------MFQKICISFATWGYAVFAADLLGHGRSDGIRCY---------LGDMEKVAASSLSFFKH 120 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~~~~~~~d~~~~l~~ 120 (323)
.+|+|.-|--++..| +.-.+++.| +--++..+.|-+|+|.+--.. ..+.++...|...+|.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 688888887665442 112233333 567899999999999732111 12568888999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE-ccCcccCC
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF-SAPLFVIP 169 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl-~~~~~~~~ 169 (323)
++.+......+|+++|-|+||++|..+=.++|.. |.|... .+|..-+.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi-v~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI-VLGALAASAPVLYFE 206 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhh-hhhhhhccCceEeec
Confidence 9988654567999999999999999999999998 655554 44444333
No 196
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.85 E-value=0.00051 Score=49.63 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=64.8
Q ss_pred CcceEEEEecCCCCCccccHH---------------HHHHHHhhCCcEEEEecCCC---CcCCC-CCcccCCChHHHhhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQ---------------KICISFATWGYAVFAADLLG---HGRSD-GIRCYLGDMEKVAAS 113 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~---------------~~~~~l~~~g~~v~~~d~~G---~G~s~-~~~~~~~~~~~~~~d 113 (323)
++...+|+|||.|.-....|. ++++...+.||.|+..+.-- +-.+. .+..+ ...-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky---irt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY---IRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh---ccchHHH
Confidence 456799999998853221332 23455556799999987531 11111 11111 1122222
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCC
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIP 169 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~ 169 (323)
+..+-.++-... ....+.++.||.||...+.+..++|+. .|.++.+..++...+
T Consensus 176 ~~yvw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 176 AKYVWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HHHHHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 332222222221 255799999999999999999998752 277777766554433
No 197
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.83 E-value=4.8e-05 Score=44.00 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=28.4
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCCC-----CCcceEEEEecCCCCCccccH
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPLD-----QKVKATVYMTHGYGSDTGWMF 72 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-----~~~~~~vv~~HG~~~~~~~~~ 72 (323)
+....+.+.+++.+.+.|| -|......+++ ..++|+|++.||+.+++. .|
T Consensus 4 ~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 4 LIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp HHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred HHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 3456788999999999999 76665554432 256899999999998776 44
No 198
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.81 E-value=0.00033 Score=57.38 Aligned_cols=112 Identities=17% Similarity=0.117 Sum_probs=81.4
Q ss_pred cceEEEEecCCCCCccccH-----HHHHHHHhhCCcEEEEecCCCCcCCCCCccc------CCChHHHhhcHHHHHHHHH
Q 020633 54 VKATVYMTHGYGSDTGWMF-----QKICISFATWGYAVFAADLLGHGRSDGIRCY------LGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~l~ 122 (323)
..|..|+|-|=|.-.. .| ..+.....+.|-.|+.++.|-+|.|.+.... ..+..+...|+..+|+++.
T Consensus 85 ~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 3677777777654331 12 1223333344889999999999988643221 2267888899999999999
Q ss_pred hcCCCCCC-CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 123 DSEPYRDL-PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 123 ~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+.+.... |++.+|-|+-|.++..+=.++|+. +.+.|..+++..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel-~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL-TVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchh-heeeccccccee
Confidence 98765444 999999999999999999999999 777777665543
No 199
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.79 E-value=7.2e-05 Score=53.08 Aligned_cols=58 Identities=21% Similarity=0.193 Sum_probs=40.2
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcc
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLF 166 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~ 166 (323)
.......+...++....+++ ..+++++|||+||.+|..++...... .+..++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p--~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYP--DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455666666766655444 66899999999999999988876441 255666666544
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.70 E-value=0.0024 Score=45.85 Aligned_cols=120 Identities=16% Similarity=0.088 Sum_probs=71.3
Q ss_pred EEEecCCCCCcceEEEEecCCCCCccccHH-------HHHHH----H--hhCCcEEEEecCCCCcCCCC---CcccCCCh
Q 020633 44 TQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICIS----F--ATWGYAVFAADLLGHGRSDG---IRCYLGDM 107 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-------~~~~~----l--~~~g~~v~~~d~~G~G~s~~---~~~~~~~~ 107 (323)
...+|... ..+.+.++++|.+.+...... .+.+. + ...+-.|-++-+.||-.-.. .......-
T Consensus 9 ava~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A 87 (177)
T PF06259_consen 9 AVAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYA 87 (177)
T ss_pred EEEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHH
Confidence 34566555 667899999999865431111 11111 1 11222444444444422100 01111123
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+.-+.++..+++.|.... ....++.++|||+|+.++-..+...+.. ++.+|+++++.
T Consensus 88 ~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~-vddvv~~GSPG 144 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLR-VDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCC-cccEEEECCCC
Confidence 556678888888888776 2366899999999999998877774555 99999887653
No 201
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.63 E-value=0.00015 Score=59.05 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=57.5
Q ss_pred ccHHHHHHHHhhCCcE------EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHH
Q 020633 70 WMFQKICISFATWGYA------VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~ 143 (323)
+.|..+++.|..-||. -..+|+|- |.... ...+++...+...|+...+..+ .+|++|++||||+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~---e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS---EERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLY 195 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh---hHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHH
Confidence 4788899999988886 45677772 21111 1456777888888887777664 579999999999999
Q ss_pred HHHHhhhcCC
Q 020633 144 TMLMYFQSEP 153 (323)
Q Consensus 144 a~~~a~~~p~ 153 (323)
.+.+...+++
T Consensus 196 ~lyFl~w~~~ 205 (473)
T KOG2369|consen 196 VLYFLKWVEA 205 (473)
T ss_pred HHHHHhcccc
Confidence 9999988776
No 202
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.55 E-value=0.00072 Score=51.64 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=39.6
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCceeEEEEccCcc
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~vl~~~~~ 166 (323)
.+.....++...+..+..+++ ..++++.|||+||.+|..++.... ...+..+...+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p--~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYP--DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 445555666666666665554 668999999999999998877532 22266555555544
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.54 E-value=0.0036 Score=47.19 Aligned_cols=49 Identities=12% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCceeEEEEccCcc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~vl~~~~~ 166 (323)
..+.++.+.... +.++.+.|||.||.+|..++...+ ++ |.+++..+++.
T Consensus 71 A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~r-I~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDR-ISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhh-eeEEEEeeCCC
Confidence 344455554443 336999999999999999888733 35 88888776654
No 204
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.47 E-value=0.00038 Score=58.78 Aligned_cols=93 Identities=10% Similarity=0.041 Sum_probs=60.0
Q ss_pred ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHh
Q 020633 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMY 148 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
+.|..+++.|++.||. -.++.|...--... .....-+.+...+...|+.+....+ +.+++|+||||||.+++.+.
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHH
Confidence 4678999999999996 33433332111100 0011336666778888887765543 56999999999999999876
Q ss_pred hhcC--------------CCceeEEEEccCcc
Q 020633 149 FQSE--------------PNTWTGLIFSAPLF 166 (323)
Q Consensus 149 ~~~p--------------~~~v~~~vl~~~~~ 166 (323)
.... ++.|++.|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 6321 11378888887654
No 205
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.38 E-value=0.00044 Score=48.21 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=35.4
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----C--CceeEEEEccCcc
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----P--NTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~--~~v~~~vl~~~~~ 166 (323)
.+.+.+.+.++.+..+++ ..++++.|||+||.+|..++.... . ..+..+..-+|..
T Consensus 45 ~~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 344556666666666654 568999999999999988887621 1 2255555555543
No 206
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.32 E-value=0.0014 Score=57.10 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=68.1
Q ss_pred cEEEEEecCCCCCc--ceEEEEecCCCCCccc--cH--HHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHH
Q 020633 41 KLFTQSFLPLDQKV--KATVYMTHGYGSDTGW--MF--QKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~~~~--~~~vv~~HG~~~~~~~--~~--~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 110 (323)
-|+..+|.|..... .|++|++||++-.... .+ ......+..+..-|+.+.+| |+.... ......++.-
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN~gl- 173 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGNLGL- 173 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCcccH-
Confidence 46777787775332 6999999998743221 12 12222333445788888888 221211 1111112221
Q ss_pred hhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCc
Q 020633 111 AASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPL 165 (323)
Q Consensus 111 ~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~ 165 (323)
.|....+++++.. .+.++.+|.|+|||.||..+..+...- ... +.++|..++.
T Consensus 174 -~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~L-F~~aI~~SG~ 231 (545)
T KOG1516|consen 174 -FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGL-FHKAISMSGN 231 (545)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHH-HHHHHhhccc
Confidence 2555555555543 335688999999999999987766541 122 4555555443
No 207
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.29 E-value=0.016 Score=46.45 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=49.4
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
....+.+.+.+..|.++|....+++.+.... -+++.+-+.++-|..++ ..+.....+...+|++....
T Consensus 223 ~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~---r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 223 ELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHF---RSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeee---ccCcHHHHHHHHHHHHhccc
Confidence 3356788999999999999988888555432 34555556778888875 34556688888899987654
No 208
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.20 E-value=0.0014 Score=47.57 Aligned_cols=78 Identities=12% Similarity=0.011 Sum_probs=50.2
Q ss_pred cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh------cCCCcee
Q 020633 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ------SEPNTWT 157 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~~v~ 157 (323)
..+..+++|-.... ..+..+...-+.++...|+....+.+ ..+++|+|+|.|+.++..++.. ..++ |.
T Consensus 40 ~~~~~V~YpA~~~~---~~y~~S~~~G~~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~-I~ 113 (179)
T PF01083_consen 40 VAVQGVEYPASLGP---NSYGDSVAAGVANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSGDGLPPDVADR-IA 113 (179)
T ss_dssp EEEEE--S---SCG---GSCHHHHHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHH-EE
T ss_pred eEEEecCCCCCCCc---ccccccHHHHHHHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHhccCChhhhhh-EE
Confidence 55666677743221 11222456666778888887777776 7799999999999999998776 1234 88
Q ss_pred EEEEccCccc
Q 020633 158 GLIFSAPLFV 167 (323)
Q Consensus 158 ~~vl~~~~~~ 167 (323)
++++++-+..
T Consensus 114 avvlfGdP~~ 123 (179)
T PF01083_consen 114 AVVLFGDPRR 123 (179)
T ss_dssp EEEEES-TTT
T ss_pred EEEEecCCcc
Confidence 9998875543
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0022 Score=53.06 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=74.9
Q ss_pred EEEEEecC-CCCCcceEEEEecCCCCCccccHHHHHHH-------------------HhhCCcEEEEec-CCCCcCCCC-
Q 020633 42 LFTQSFLP-LDQKVKATVYMTHGYGSDTGWMFQKICIS-------------------FATWGYAVFAAD-LLGHGRSDG- 99 (323)
Q Consensus 42 l~~~~~~~-~~~~~~~~vv~~HG~~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~- 99 (323)
..++.+.+ ....++|.|+++.|++|.++ .+-.+.+. +... -.++.+| .-|.|.|..
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccccc
Confidence 33444444 33356899999999998876 55444221 1111 3688999 448888874
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCC---CCCCCeEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCccc
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEP---YRDLPGFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFV 167 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~ 167 (323)
......++....+|+..+.+.+....+ -...+.+|+|.|+||.-+..+|..--+. ..++++++++...
T Consensus 165 ~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 165 GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 223334666666777766665543321 0123789999999999888877653221 1455555555443
No 210
>PLN02454 triacylglycerol lipase
Probab=96.92 E-value=0.0032 Score=51.31 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=30.9
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
...+++...++.+...++....+|++.|||+||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 455677777777777665212249999999999999998864
No 211
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.76 E-value=0.0077 Score=50.68 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=66.2
Q ss_pred CCcEEEEEecCCCCCcceEEEEecCCCCC------ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSD------TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~HG~~~~------~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.|+-.|..|.++.+.++-.|+-+||+|.- ++.+.+.++..| |.-|+.+|+----+.+ +....+
T Consensus 380 ~g~~~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP--------FPRale 448 (880)
T KOG4388|consen 380 NGQRSLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP--------FPRALE 448 (880)
T ss_pred cCccccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC--------CCcHHH
Confidence 34334555555543557788999998732 122334444443 7899999985333222 222223
Q ss_pred cHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCcccC
Q 020633 113 SSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 113 d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~ 168 (323)
.+.-..-|+.... +..+++|+++|-|.||.+.+..+.+ +.-+..+++++.-++.-.
T Consensus 449 Ev~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 449 EVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred HHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 3333333322211 1236799999999999876555443 222335788887665443
No 212
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.59 E-value=0.019 Score=39.69 Aligned_cols=77 Identities=10% Similarity=-0.027 Sum_probs=48.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcE-EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYA-VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
...||+.-|||..++ ....+. ...++. ++++|++.... ++ |+.+ ...+-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi---lpeN~dl~lcYDY~dl~l---------df-----DfsA------------y~hir 60 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI---LPENHDLLLCYDYQDLNL---------DF-----DFSA------------YRHIR 60 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc---CCCCCcEEEEeehhhcCc---------cc-----chhh------------hhhhh
Confidence 458999999997766 444332 234454 56788873321 11 1111 11467
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
++++|||-.+|-++....+ ++..+.+++
T Consensus 61 lvAwSMGVwvAeR~lqg~~---lksatAiNG 88 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR---LKSATAING 88 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc---ccceeeecC
Confidence 8999999999998887655 556666554
No 213
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.55 E-value=0.07 Score=41.68 Aligned_cols=133 Identities=15% Similarity=0.230 Sum_probs=87.8
Q ss_pred EEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHH--------------HHhhCCcEEEEecCC-CCcC
Q 020633 35 FETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICI--------------SFATWGYAVFAADLL-GHGR 96 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~--------------~l~~~g~~v~~~d~~-G~G~ 96 (323)
+...++ ..+++.|.... ...+|..+.+.|.++.++.-|-.+-+ .| +. ..++.+|-| |.|.
T Consensus 8 v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k~-adllfvDnPVGaGf 85 (414)
T KOG1283|consen 8 VDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-KD-ADLLFVDNPVGAGF 85 (414)
T ss_pred eeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-hh-ccEEEecCCCcCce
Confidence 344456 67666665432 14578889999987665423332221 12 22 567888877 7777
Q ss_pred CC--CCcccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc------C--CCceeEEEEccCc
Q 020633 97 SD--GIRCYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS------E--PNTWTGLIFSAPL 165 (323)
Q Consensus 97 s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~------p--~~~v~~~vl~~~~ 165 (323)
|- +...+..+..+.+.|+.++++.+-...+ ....|++++-.|+||-+|..++... . +.++.+++|-.++
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 74 4444455778899999999988765543 3456899999999999998877652 1 2237788887777
Q ss_pred ccCC
Q 020633 166 FVIP 169 (323)
Q Consensus 166 ~~~~ 169 (323)
.+..
T Consensus 166 ISP~ 169 (414)
T KOG1283|consen 166 ISPE 169 (414)
T ss_pred cChh
Confidence 6543
No 214
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.52 E-value=0.0085 Score=39.47 Aligned_cols=39 Identities=8% Similarity=0.063 Sum_probs=23.5
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG 69 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~ 69 (323)
.-.++.+..+| .||+....+.+ ....+|||+||++++--
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GG
T ss_pred cCCCeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHH
Confidence 34566666789 99999888765 56789999999998754
No 215
>PLN02310 triacylglycerol lipase
Probab=96.47 E-value=0.0082 Score=48.97 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=18.8
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..++.+.|||+||.+|+..|..
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHH
Confidence 3479999999999999988754
No 216
>PLN02162 triacylglycerol lipase
Probab=96.30 E-value=0.011 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+.+.++.+..+++ ..++++.|||+||.+|..++.
T Consensus 264 I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 3444444333333 568999999999999988765
No 217
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.27 E-value=0.0095 Score=42.89 Aligned_cols=66 Identities=18% Similarity=0.264 Sum_probs=50.7
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHc---CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|-|-|+.|.+....+.....+.+ +......++.+|+||+..+.-+ ...+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-RWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-hhhhhhhHHHHHHHHhC
Confidence 578888999999999988766655554 2233567788999999986544 56788999999998753
No 218
>PLN02408 phospholipase A1
Probab=96.23 E-value=0.0082 Score=48.35 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=26.5
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+.+.++.+...++....+|++.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 444444555544443223369999999999999988875
No 219
>PLN02571 triacylglycerol lipase
Probab=96.21 E-value=0.0092 Score=48.81 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=25.2
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+.++.+...++....++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 344444444443332112368999999999999988865
No 220
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.17 E-value=0.011 Score=43.62 Aligned_cols=74 Identities=14% Similarity=0.037 Sum_probs=42.9
Q ss_pred HHHHhhCCcEEEEecCCCCcCCCCC----cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 76 CISFATWGYAVFAADLLGHGRSDGI----RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 76 ~~~l~~~g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+..|... .+|+++-+|=.....-. .......+--..|+.+..++...... .+.+++|+|||.|+.+..++..++
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3344444 67888887733211100 00001122233666666655444332 256899999999999999998874
No 221
>PLN02847 triacylglycerol lipase
Probab=96.12 E-value=0.026 Score=48.16 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=25.6
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+...+..+...++ +-+++++|||+||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~P--dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEYP--DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHH
Confidence 334444444444443 5589999999999999887765
No 222
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.11 E-value=0.075 Score=45.29 Aligned_cols=119 Identities=18% Similarity=0.278 Sum_probs=71.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHH----HHHHHhhCCcEEEEecCCCCcCCCC--CcccCCChHHHh---
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK----ICISFATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVA--- 111 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~--- 111 (323)
.|.+.++.|.+ =..-++.+-|.|......+.. +...+ .+||.+++-|- ||..+.. ......+.+.+.
T Consensus 16 ~i~fev~LP~~--WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa 91 (474)
T PF07519_consen 16 NIRFEVWLPDN--WNGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFA 91 (474)
T ss_pred eEEEEEECChh--hccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHH
Confidence 78888888873 112344444444332212222 33334 67999999995 7765533 111112222221
Q ss_pred --------hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 112 --------ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 --------~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.--+++++..- +.....-+..|.|-||.-++..|.++|+. +++|+..+|...
T Consensus 92 ~ra~h~~~~~aK~l~~~~Y---g~~p~~sY~~GcS~GGRqgl~~AQryP~d-fDGIlAgaPA~~ 151 (474)
T PF07519_consen 92 YRALHETTVVAKALIEAFY---GKAPKYSYFSGCSTGGRQGLMAAQRYPED-FDGILAGAPAIN 151 (474)
T ss_pred hhHHHHHHHHHHHHHHHHh---CCCCCceEEEEeCCCcchHHHHHHhChhh-cCeEEeCCchHH
Confidence 11222232222 22255789999999999999999999999 999999998764
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.04 E-value=0.0085 Score=50.15 Aligned_cols=38 Identities=18% Similarity=0.353 Sum_probs=25.1
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+++..+++....... ..++.|.|||+||.+|+..|..
T Consensus 301 l~eV~rLv~~Yk~~ge--~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGE--EVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCC--cceEEEeccCHHHHHHHHHHHH
Confidence 3445555544432111 3479999999999999988854
No 224
>PLN02324 triacylglycerol lipase
Probab=95.95 E-value=0.013 Score=47.82 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=26.9
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+-++.+...++....+|++.|||+||.+|+..|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445555555555443212369999999999999988864
No 225
>PLN00413 triacylglycerol lipase
Probab=95.95 E-value=0.011 Score=49.01 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=23.8
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
...++.+..+++ ..++++.|||+||.+|..++.
T Consensus 271 ~~~Lk~ll~~~p--~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 271 LRHLKEIFDQNP--TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHH
Confidence 334444444443 568999999999999998875
No 226
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.92 E-value=0.033 Score=39.13 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.8
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+...++-|-||||..|..+..++|+. +.++|.+++.++
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~l-ftkvialSGvYd 137 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHL-FTKVIALSGVYD 137 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhH-hhhheeecceee
Confidence 34678899999999999999999999 999999998765
No 227
>PLN02934 triacylglycerol lipase
Probab=95.83 E-value=0.012 Score=49.17 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+...++.+..+++ ..++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 4555555555554 668999999999999998874
No 228
>PLN02802 triacylglycerol lipase
Probab=95.71 E-value=0.017 Score=48.30 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=25.9
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+-++.+...++....+|++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344444444444443113379999999999999988765
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.66 E-value=0.024 Score=43.34 Aligned_cols=44 Identities=27% Similarity=0.416 Sum_probs=35.0
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.+.+..+..+++..++..++ ..++.+.|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 255 FDRYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC
Confidence 34455666777777777777 789999999999999998877764
No 230
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.66 E-value=0.024 Score=43.34 Aligned_cols=44 Identities=27% Similarity=0.416 Sum_probs=35.0
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.+.+..+..+++..++..++ ..++.+.|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 255 FDRYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC
Confidence 34455666777777777777 789999999999999998877764
No 231
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.55 E-value=0.053 Score=50.12 Aligned_cols=97 Identities=19% Similarity=0.171 Sum_probs=60.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
...|++.|+|.+-+... .+..++..| ..|.+|.-........+++..+.-...-++.++ + .++.
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ---P--~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ---P--EGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC---C--CCCe
Confidence 45789999999876554 444444433 234444433222223366666555444444444 3 5589
Q ss_pred EEEEechhHHHHHHHhhhcC--CCceeEEEEccCcc
Q 020633 133 FLFGESMGGAATMLMYFQSE--PNTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p--~~~v~~~vl~~~~~ 166 (323)
.++|+|+|+.++..+|.... +. ...+|++++..
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~-~~~lillDGsp 2219 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQS-PAPLILLDGSP 2219 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcC-CCcEEEecCch
Confidence 99999999999999887632 22 55688876543
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.45 E-value=0.051 Score=43.30 Aligned_cols=62 Identities=18% Similarity=0.426 Sum_probs=46.9
Q ss_pred CCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++.+|-.++.++.|.+.++..+...++.+++ ...+..+|+..|... ... +.+.+..|+.+.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~----n~~---i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI----NQF---IKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh----HHH---HHHHHHHHHHHH
Confidence 56789999999999999999999999999942 245788899999887 222 344455555543
No 233
>PLN02761 lipase class 3 family protein
Probab=95.31 E-value=0.028 Score=47.22 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=25.8
Q ss_pred hcHHHHHHHHHhcC----CCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSE----PYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+.|+.+...+ .....+|.+.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44455555554433 1113479999999999999988753
No 234
>PLN02753 triacylglycerol lipase
Probab=95.24 E-value=0.031 Score=47.07 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=26.7
Q ss_pred hhcHHHHHHHHHhcCCC---CCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPY---RDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+.++.+...++. ...+|.+.|||+||.+|+..|..
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455555555444321 13489999999999999988754
No 235
>PLN02719 triacylglycerol lipase
Probab=94.99 E-value=0.039 Score=46.35 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=27.0
Q ss_pred hhcHHHHHHHHHhcCCC---CCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPY---RDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+++.+.|+.+...++. ...+|.+.|||+||.+|...|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555555554431 12479999999999999988754
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.74 E-value=0.14 Score=38.77 Aligned_cols=64 Identities=20% Similarity=0.214 Sum_probs=37.7
Q ss_pred CcEEEEecCCCC-cC-CC-CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 83 GYAVFAADLLGH-GR-SD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 83 g~~v~~~d~~G~-G~-s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
|+.+..+++|.. +- +. +......+..+-++.+.+.|+..... ..+++|+|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~----~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAA----GGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccC----CCCEEEEEECHHHHHHHHHHHH
Confidence 577788888862 11 00 11111124444444444444443323 5689999999999999887765
No 237
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.49 E-value=0.04 Score=44.59 Aligned_cols=89 Identities=15% Similarity=0.070 Sum_probs=45.3
Q ss_pred CcceEEEEecCCCC-CccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCCh-HHHhhcHHHHHHHHHhcCCCC
Q 020633 53 KVKATVYMTHGYGS-DTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDM-EKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~-~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+++-.||+.||+-+ +.. .|...+....+. +..++.....+. ..........+ ...++++.+.+....
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~s------ 148 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDYS------ 148 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhccc------
Confidence 45679999999977 334 555555555443 333333333322 11111100000 222233333332222
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
-.++-++|||+||.++..+...
T Consensus 149 i~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEe
Confidence 2389999999999987654443
No 238
>PF03283 PAE: Pectinacetylesterase
Probab=94.25 E-value=1.8 Score=35.67 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=26.7
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.-+.++++++....-.+.++++|.|.|.||.-++..+..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 345667777666511235689999999999988765543
No 239
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.18 E-value=0.067 Score=43.35 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=26.4
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+.++.+...++ .-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 344444555444444 5589999999999999988765
No 240
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.82 E-value=0.24 Score=40.01 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=29.0
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~ 167 (323)
..|+.|+|||+|+.+.........++ -|..+++++.+..
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 56899999999999987766553222 2788888886654
No 241
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.93 E-value=0.27 Score=42.11 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=35.4
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh-----cCC-----CceeEEEEccCcc
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-----SEP-----NTWTGLIFSAPLF 166 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~-----~~v~~~vl~~~~~ 166 (323)
++.-...+++.+....-.++.+++.+||||||.++-.+... .|+ ++-+++|+++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 33334456666655443446789999999999988665544 232 1256777766543
No 242
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=90.36 E-value=0.87 Score=38.28 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=50.3
Q ss_pred EEEEEecC-CCCCcceEEEEecCCCCCc---c-ccHHHHHHHHhhC-CcEEEEecCC----CC---cCCCCCcccCCChH
Q 020633 42 LFTQSFLP-LDQKVKATVYMTHGYGSDT---G-WMFQKICISFATW-GYAVFAADLL----GH---GRSDGIRCYLGDME 108 (323)
Q Consensus 42 l~~~~~~~-~~~~~~~~vv~~HG~~~~~---~-~~~~~~~~~l~~~-g~~v~~~d~~----G~---G~s~~~~~~~~~~~ 108 (323)
|+..+|.| .++....++|.|-|+|--+ . ..|. .+.|+.. ...|+.+++| |+ +..+..++...-++
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~D 198 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLD 198 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHH
Confidence 66777877 3334456888888876321 1 1332 3344443 3556677776 11 11212222221222
Q ss_pred H--HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHH
Q 020633 109 K--VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT 144 (323)
Q Consensus 109 ~--~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a 144 (323)
+ ....+.+-|... +.++.++.|+|.|.|+.-.
T Consensus 199 QqLAl~WV~~Ni~aF----GGnp~~vTLFGESAGaASv 232 (601)
T KOG4389|consen 199 QQLALQWVQENIAAF----GGNPSRVTLFGESAGAASV 232 (601)
T ss_pred HHHHHHHHHHhHHHh----CCCcceEEEeccccchhhh
Confidence 2 123333333333 3457799999999998644
No 243
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.04 E-value=11 Score=32.10 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=70.9
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh-HHHhhcH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM-EKVAASS 114 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~d~ 114 (323)
...+ .+.|+ +.|++ -+.|..|+.-|+-..-++.-..+++.|..- -.+.-|.|--|.+--.-.. .+ +...+-+
T Consensus 272 D~~reEi~yY-FnPGD-~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs~--eyE~~I~~~I 345 (511)
T TIGR03712 272 DSKRQEFIYY-FNPGD-FKPPLNVYFSGYRPAEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGSD--EYEQGIINVI 345 (511)
T ss_pred cCCCCeeEEe-cCCcC-CCCCeEEeeccCcccCcchhHHHHHhcCCC--eEEeeccccccceeeeCcH--HHHHHHHHHH
Confidence 3344 55443 33433 456788999998754332222345555321 2455588866665321111 12 3344555
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+.+++|+-+ ...++|-|-|||..-|+.++++.. ..++|+.-|...
T Consensus 346 ~~~L~~LgF~----~~qLILSGlSMGTfgAlYYga~l~---P~AIiVgKPL~N 391 (511)
T TIGR03712 346 QEKLDYLGFD----HDQLILSGLSMGTFGALYYGAKLS---PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHhCCC----HHHeeeccccccchhhhhhcccCC---CceEEEcCcccc
Confidence 6666666655 568999999999999999998854 347777776654
No 244
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.99 E-value=3.6 Score=32.52 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=51.0
Q ss_pred ceEEEEecCCCCCcccc-----HHHHHHHH-hhCCcEEEEecCCCCcCC--------CCCcccC--CCh-HHHhhcHHHH
Q 020633 55 KATVYMTHGYGSDTGWM-----FQKICISF-ATWGYAVFAADLLGHGRS--------DGIRCYL--GDM-EKVAASSLSF 117 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~~~~--~~~-~~~~~d~~~~ 117 (323)
|..|||+=|.+.+.... -..+.+.+ ...+-..+++=.+|-|.. ....... ..+ ....+.+...
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 35778888877543211 23344445 222334455566777771 1100000 000 1223344444
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
...+...+. ...+|.++|+|-|+.+|-.++..
T Consensus 81 y~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 81 YRFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 555544432 25689999999999999988865
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.46 E-value=4.1 Score=26.32 Aligned_cols=84 Identities=12% Similarity=-0.012 Sum_probs=49.5
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhH--HHHHHHh
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGG--AATMLMY 148 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg--~~a~~~a 148 (323)
.|..+.+.+..+||-.=.+.++..|.+....-.....+. =...|+.+....+ ..+++++|-|--. -+-..+|
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~----K~~~i~~i~~~fP--~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEH----KRDNIERILRDFP--ERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhH----HHHHHHHHHHHCC--CCcEEEEeeCCCcCHHHHHHHH
Confidence 556667777677887777777777554321111001111 2233334444444 6699999999544 3344567
Q ss_pred hhcCCCceeEEEE
Q 020633 149 FQSEPNTWTGLIF 161 (323)
Q Consensus 149 ~~~p~~~v~~~vl 161 (323)
.++|++ |.++.+
T Consensus 86 ~~~P~~-i~ai~I 97 (100)
T PF09949_consen 86 RRFPGR-ILAIYI 97 (100)
T ss_pred HHCCCC-EEEEEE
Confidence 789999 888754
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.51 E-value=1.2 Score=38.25 Aligned_cols=66 Identities=23% Similarity=0.276 Sum_probs=49.1
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcC----CC------CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKAS----SA------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
-.-.+++.||..|.++|+....++++++. .. -.++..+||.+|+.--.-+. .-..+..|.+|+++-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~--~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPD--PFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCC--CCCHHHHHHHHHhCC
Confidence 35689999999999999988887777652 11 24688889999998733222 224888999999854
No 247
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=83.34 E-value=13 Score=29.70 Aligned_cols=97 Identities=12% Similarity=-0.025 Sum_probs=57.4
Q ss_pred CcceEEEEecCCCCC----ccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCc----------ccCCC--hHHHhhcHH
Q 020633 53 KVKATVYMTHGYGSD----TGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIR----------CYLGD--MEKVAASSL 115 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----------~~~~~--~~~~~~d~~ 115 (323)
..+..|+|+-|.... ....--.+...|.. .+..++++--+|.|.-.-.. ....+ -..+...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 457788888886422 11122234455544 57888888778887653110 00000 012234455
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+...|...+. .+++|+++|+|-|+.+|--+|..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 55555555543 26689999999999999888776
No 248
>PRK12467 peptide synthase; Provisional
Probab=82.61 E-value=15 Score=41.20 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=63.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.+.+++.|...+... .+..+...+.. +..++.+..++.-... . ...+++.++....+.+.+... ..+..+
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~-~~~~~~l~~~~~~~d~-~--~~~~~~~~~~~y~~~~~~~~~-----~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEG-DRHVLGLTCRHLLDDG-W--QDTSLQAMAVQYADYILWQQA-----KGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCC-CCcEEEEecccccccc-C--CccchHHHHHHHHHHHHHhcc-----CCCeee
Confidence 456999999887655 67777777754 4788888776542211 1 122566666666666666553 347899
Q ss_pred EEechhHHHHHHHhhh---cCCCceeEEEEc
Q 020633 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFS 162 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~ 162 (323)
.|+|+||.++..++.. ..+. +..+.++
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~-~~~~~~~ 3791 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGES-EAFLGLF 3791 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCc-eeEEEEE
Confidence 9999999999887765 2333 5555444
No 249
>PRK02399 hypothetical protein; Provisional
Probab=79.72 E-value=23 Score=29.63 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=58.8
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---------cCCC-------------hHHHhhcHHH
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC---------YLGD-------------MEKVAASSLS 116 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~-------------~~~~~~d~~~ 116 (323)
|++=|...++...+..+.+.+.++|..|+.+|.-..|....... ...+ ++.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 44445555554466667777777799999999843432210000 0001 2333344445
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
+++.+..+.. -.-++-+|-|.|..++.......|-- +-++++
T Consensus 86 ~v~~L~~~g~--i~gviglGGs~GT~lat~aMr~LPiG-~PKlmV 127 (406)
T PRK02399 86 FVRELYERGD--VAGVIGLGGSGGTALATPAMRALPIG-VPKLMV 127 (406)
T ss_pred HHHHHHhcCC--ccEEEEecCcchHHHHHHHHHhCCCC-CCeEEE
Confidence 5554444432 33578899999999999988887765 544444
No 250
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=78.61 E-value=16 Score=30.65 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=29.2
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
|||+|.... . .|+.+++.|.++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p--~-~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--G-QFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--h-hHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 788987642 3 688999999999999988877766543
No 251
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=78.40 E-value=21 Score=29.83 Aligned_cols=101 Identities=16% Similarity=0.048 Sum_probs=61.5
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc---------C-------------CChHHHhhcH
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY---------L-------------GDMEKVAASS 114 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~-------------~~~~~~~~d~ 114 (323)
+|+++ |...++...+..+.+.+.+.|..|+.+|.-=.+........ . ..++.+.+-+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 44444 44445544677788888889999999997544443311100 0 0123334444
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
..++..+..+.. -.-++-+|-|.|..++.......|-- +-++++
T Consensus 82 ~~~v~~l~~~g~--i~Gvi~~GGs~GT~lat~aMr~LPiG-~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGK--IDGVIGIGGSGGTALATAAMRALPIG-FPKLMV 125 (403)
T ss_pred HHHHHHHHhcCC--ccEEEEecCCccHHHHHHHHHhCCCC-CCeEEE
Confidence 555555555432 23478899999999999988887765 545544
No 252
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=77.67 E-value=23 Score=26.54 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=27.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCc-EEEEecCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGY-AVFAADLL 92 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~ 92 (323)
+...+|++.||...++...|..+-..|.++|| .|+....-
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve 176 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVE 176 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 55678999999876665466666666777788 55554443
No 253
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=76.88 E-value=11 Score=27.02 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=32.3
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
.+...+++.++++.+..+ +.+|+++|-|..|.+-+.++...++. +..++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~-I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDL-IDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTT-S--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcce-eEEEEeCCh
Confidence 445556677777777776 55899999999999999988876776 777766554
No 254
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=75.93 E-value=6.5 Score=28.49 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=30.1
Q ss_pred CcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecC
Q 020633 53 KVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
..++.+|++-|+.++. +..-..+.+.|.+.|++++.+|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3467899999998764 32455677788889999999983
No 255
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=75.41 E-value=15 Score=27.53 Aligned_cols=72 Identities=13% Similarity=-0.057 Sum_probs=45.6
Q ss_pred HHHHhhCCc-EEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEech----hHHHHHHHhhh
Q 020633 76 CISFATWGY-AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESM----GGAATMLMYFQ 150 (323)
Q Consensus 76 ~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~ 150 (323)
.+.+...|. +|+..|-+.... ++.+.++..+.++++... ..++++|+|. |..++-++|.+
T Consensus 69 ~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~~-------p~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 69 LREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKIG-------VDLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred HHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHhC-------CCEEEEcCCcccCCcCcHHHHHHHH
Confidence 334445566 677777653321 356777777777776543 2699999998 88899888887
Q ss_pred cCCCceeEEEEc
Q 020633 151 SEPNTWTGLIFS 162 (323)
Q Consensus 151 ~p~~~v~~~vl~ 162 (323)
..-.-+..++-+
T Consensus 134 Lga~lvsdv~~l 145 (202)
T cd01714 134 LGWPQITYVSKI 145 (202)
T ss_pred hCCCccceEEEE
Confidence 432214444443
No 256
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.23 E-value=11 Score=32.34 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=29.3
Q ss_pred CCCeEEEEechhHHHHHHHhhh-----cCCCceeEEEEccCcccCC
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~vl~~~~~~~~ 169 (323)
..||.|+|+|+|+.+....... .-.. |..+++++++....
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~i-IEnViL~GaPv~~k 490 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGI-IENVILFGAPVPTK 490 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccc-eeeeeeccCCccCC
Confidence 5689999999999998865543 2233 78888888766543
No 257
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=72.03 E-value=16 Score=22.12 Aligned_cols=45 Identities=11% Similarity=-0.008 Sum_probs=28.7
Q ss_pred HHHhhcHHHHHHHHHhcCCCC-CCCeEEEEechhHHHHHHHhhhcC
Q 020633 108 EKVAASSLSFFKHVRDSEPYR-DLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.-....+.+.+++++...... ++++.++|-|-|=.+|.+.+..+.
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 334456666667766643322 357899999999999988877753
No 258
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=70.69 E-value=11 Score=28.09 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=30.1
Q ss_pred cceEEEEecCCCCCccc--cHHHHHHHHhhCCcEEEEecCC
Q 020633 54 VKATVYMTHGYGSDTGW--MFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.++.|.||+-.+.+..+ +-+...+.|.+.|+.+..+++-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 36799999988877654 4466778888999999888753
No 259
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=69.72 E-value=7 Score=26.53 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=37.5
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcE---EE----EecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWGYA---VF----AADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~---v~----~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
..+|.|+-+||+.|... +.-+.+++.|-+.|.. |. ..|+| ....++++-+++...|...-..
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~~v~~ 119 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRGNVSR 119 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHHHHHh
Confidence 55899999999988754 2334566666555432 22 22332 1125677777777777665544
Q ss_pred C
Q 020633 125 E 125 (323)
Q Consensus 125 ~ 125 (323)
.
T Consensus 120 C 120 (127)
T PF06309_consen 120 C 120 (127)
T ss_pred C
Confidence 3
No 260
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=68.50 E-value=38 Score=23.84 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=43.1
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.++||.|+ |+ |. .+.... .++.+++..+...+..=.. ..-|.+.|...|-.++ |.++|
T Consensus 16 ~~l~~~L~~~g~eV~--D~-G~--~~~~~~--~dYpd~a~~va~~V~~g~~-----~~GIliCGtGiG~sia---ANK~~ 80 (148)
T PRK05571 16 EEIIEHLEELGHEVI--DL-GP--DSYDAS--VDYPDYAKKVAEAVVAGEA-----DRGILICGTGIGMSIA---ANKVK 80 (148)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC--CCCCCC--CCHHHHHHHHHHHHHcCCC-----CEEEEEcCCcHHHHHH---HhcCC
Confidence 457888988999885 43 21 111101 2556666665555532211 2236677777776655 55777
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++.++.++
T Consensus 81 G--IRAA~~~d~ 90 (148)
T PRK05571 81 G--IRAALCHDT 90 (148)
T ss_pred C--eEEEEECCH
Confidence 6 777777664
No 261
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=68.36 E-value=17 Score=32.06 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=30.0
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
++.-+.|-||..++..|.+..+.-|++++...|...+.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 45557888999999999887665599999988866554
No 262
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=67.09 E-value=56 Score=25.18 Aligned_cols=38 Identities=13% Similarity=0.047 Sum_probs=26.7
Q ss_pred ceEEEEecCCCCC--ccccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSD--TGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
++.|+||+-.... ...+...+.+.|.+.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5789999977632 2323455667787889998888765
No 263
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=66.69 E-value=8 Score=29.49 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=26.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
...||++|............+++.|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 357999998543322267788999999999998875
No 264
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=65.43 E-value=57 Score=25.46 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=26.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcE-EEEecCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYA-VFAADLL 92 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 92 (323)
++.+.|++++-.++........+.+.|.+.|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 446788899866554443556677778777884 5566664
No 265
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=61.82 E-value=16 Score=25.95 Aligned_cols=38 Identities=16% Similarity=0.083 Sum_probs=27.1
Q ss_pred ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
++.||++-|..++. ...-..+.+.|.+.|+.++.+|--
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 46899999998764 324456777888889999999843
No 266
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=61.12 E-value=55 Score=22.98 Aligned_cols=74 Identities=15% Similarity=0.039 Sum_probs=42.0
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.+.||.|+ |+ |..+..+ .++.+++..+...+..=.. ..-|.+.|...|-.++ |.++|
T Consensus 14 ~~l~~~L~~~g~eV~--D~---G~~~~~~---~dYpd~a~~va~~V~~g~~-----~~GIliCGtGiG~sia---ANK~~ 77 (144)
T TIGR00689 14 SEIIEHLKQKGHEVI--DC---GTLYDER---VDYPDYAKLVADKVVAGEV-----SLGILICGTGIGMSIA---ANKFK 77 (144)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCCCCC---CChHHHHHHHHHHHHcCCC-----ceEEEEcCCcHHHHHH---HhcCC
Confidence 457888989999885 43 2111111 2556666666555532111 1235666766665554 55777
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++.++.++
T Consensus 78 G--Iraa~~~d~ 87 (144)
T TIGR00689 78 G--IRAALCVDE 87 (144)
T ss_pred C--eEEEEECCH
Confidence 6 777776654
No 267
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=61.08 E-value=86 Score=25.25 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=60.0
Q ss_pred EEEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCc-------------
Q 020633 34 YFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHG------------- 95 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G------------- 95 (323)
+|.++.+ ..|+...++.- .....+=.|+-|.|. .. ....+.++|.++ +.+++++|.-|..
T Consensus 144 Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGT-GG-TitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~G 221 (300)
T COG0031 144 QFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGT-GG-TITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEG 221 (300)
T ss_pred hcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCc-ch-hHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCC
Confidence 3445555 66665555431 011223344444442 22 455667777654 4789999877521
Q ss_pred --CCCCCcccCCC-hHHH----hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHH--HHHhhhcCCCceeEEEEccC
Q 020633 96 --RSDGIRCYLGD-MEKV----AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT--MLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 96 --~s~~~~~~~~~-~~~~----~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a--~~~a~~~p~~~v~~~vl~~~ 164 (323)
.+.-+.....+ +++. -++..+..+.|..+. =+++|-|-|+.++ +.+|.+.+. =+.+|.+-|
T Consensus 222 IG~~~ip~~~~~~~iD~v~~V~d~~A~~~~r~La~~e------GilvG~SsGA~~~aa~~~a~~~~~--g~~IVti~p 291 (300)
T COG0031 222 IGAGFVPENLDLDLIDEVIRVSDEEAIATARRLAREE------GLLVGISSGAALAAALKLAKELPA--GKTIVTILP 291 (300)
T ss_pred CCCCcCCcccccccCceEEEECHHHHHHHHHHHHHHh------CeeecccHHHHHHHHHHHHHhcCC--CCeEEEEEC
Confidence 11111000000 1111 144455666666553 3899999999875 445555543 233444443
No 268
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=60.90 E-value=8.7 Score=31.16 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=16.9
Q ss_pred CCeEEEEechhHHHHHHHhhh
Q 020633 130 LPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+-.++|||+|=+.|+.++..
T Consensus 84 ~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp CESEEEESTTHHHHHHHHTTS
T ss_pred ccceeeccchhhHHHHHHCCc
Confidence 367899999999988876643
No 269
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=60.85 E-value=18 Score=28.49 Aligned_cols=38 Identities=21% Similarity=0.359 Sum_probs=27.0
Q ss_pred CCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~ 167 (323)
..+++|.|.|+|+.-+...... .-+. +++.+..+|+..
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~-vdGalw~GpP~~ 148 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDR-VDGALWVGPPFF 148 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhh-cceEEEeCCCCC
Confidence 3479999999998766543322 2344 899999988654
No 270
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=60.39 E-value=45 Score=23.26 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=39.4
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.+.||.|+=+-.. +.. ..++.+++..+...+..=.. ..-|.+.|...|-.++ |.+.|
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~-----~~~---~~dy~~~a~~va~~V~~~~~-----d~GIliCgtGiG~~ia---ANK~~ 78 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTY-----SED---SVDYPDFAEKVAEAVASGEA-----DRGILICGTGIGMSIA---ANKVP 78 (140)
T ss_dssp HHHHHHHHHTTEEEEEESES-----STS---T--HHHHHHHHHHHHHTTSS-----SEEEEEESSSHHHHHH---HHTST
T ss_pred HHHHHHHHHCCCEEEEeCCC-----CCC---CCCHHHHHHHHHHHHHcccC-----CeEEEEcCCChhhhhH---hhcCC
Confidence 45778888889988754322 111 12566666655555442211 1125566666665554 56777
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++..+.++
T Consensus 79 G--IrAa~~~d~ 88 (140)
T PF02502_consen 79 G--IRAALCSDP 88 (140)
T ss_dssp T----EEE-SSH
T ss_pred C--EEEEeeCCH
Confidence 7 777776664
No 271
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=60.34 E-value=16 Score=24.76 Aligned_cols=15 Identities=13% Similarity=0.215 Sum_probs=11.3
Q ss_pred HHHHHhhCCcEEEEe
Q 020633 75 ICISFATWGYAVFAA 89 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~ 89 (323)
....|.+.|++|+.+
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 355788889998765
No 272
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=60.03 E-value=11 Score=29.71 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=27.0
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
..||++|....+.. ....++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~-aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTE-GLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHH-HHHHHHHHHHHCCCEEEeHH
Confidence 46889997655455 67788999999999998875
No 273
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=58.77 E-value=49 Score=25.00 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=28.8
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLG 93 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G 93 (323)
..+.|+||.-.......+...+...|.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 46788888877665443556677788888 99988887543
No 274
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=58.63 E-value=68 Score=23.28 Aligned_cols=75 Identities=13% Similarity=0.065 Sum_probs=40.9
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-..+.++|.++||.|+-+- ..+... .++.+++..+...+. .... ..-|.+.|...|-.++ |.+.
T Consensus 15 K~~l~~~L~~~G~eV~D~G-----~~~~~~---~dYpd~a~~va~~V~---~g~~--~~GIliCGTGiG~sia---ANKv 78 (171)
T TIGR01119 15 KMEVSEFLKSKGYEVLDVG-----TYDFTR---THYPIFGKKVGEAVV---SGEA--DLGVCICGTGVGINNA---VNKV 78 (171)
T ss_pred HHHHHHHHHHCCCEEEEeC-----CCCCCC---CChHHHHHHHHHHHH---cCCC--CEEEEEcCCcHHHHHH---HhcC
Confidence 3567889999999886432 111111 245555555555542 2211 1235566666665554 5566
Q ss_pred CCCceeEEEEccC
Q 020633 152 EPNTWTGLIFSAP 164 (323)
Q Consensus 152 p~~~v~~~vl~~~ 164 (323)
|. |++.++.++
T Consensus 79 ~G--IRAAl~~d~ 89 (171)
T TIGR01119 79 PG--VRSALVRDM 89 (171)
T ss_pred CC--eEEEEeCCH
Confidence 76 777666554
No 275
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=58.59 E-value=15 Score=28.77 Aligned_cols=38 Identities=5% Similarity=0.050 Sum_probs=30.7
Q ss_pred ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.|+||++.|+.+.. +..-..+...|..+|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 58999999997553 336678888898999999999655
No 276
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=58.53 E-value=8.7 Score=28.34 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=24.3
Q ss_pred eEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEec
Q 020633 56 ATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 56 ~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
..||++|... .+.. ....+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~-~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVK-ALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHH-HHHHHHHHHHHCCCEEEEHH
Confidence 4699999422 1223 55778888999999998874
No 277
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=58.50 E-value=29 Score=26.02 Aligned_cols=43 Identities=19% Similarity=0.181 Sum_probs=28.1
Q ss_pred cceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 54 VKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
.+++++++||.....- ..-..+.+.|.+.|..+...-+++-|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 4789999999864421 133456778888887766666665444
No 278
>PRK09273 hypothetical protein; Provisional
Probab=58.29 E-value=75 Score=23.94 Aligned_cols=78 Identities=10% Similarity=-0.034 Sum_probs=41.1
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+..+.+.|.+.||.|+=+- ........ .++.+++.-+...+. .... ..-|.++|...|..++ |.+
T Consensus 18 i~~~L~~~L~~~G~eV~D~G-----~~~~~~~s-~dYpd~a~~vA~~V~---~g~~--d~GIliCGTGiG~siA---ANK 83 (211)
T PRK09273 18 IYEALKKVADPKGHEVFNYG-----MYDEEDHQ-LTYVQNGIMASILLN---SKAV--DFVVTGCGTGQGAMLA---LNS 83 (211)
T ss_pred HHHHHHHHHHHCCCEEEEeC-----CCCCCCCC-CChHHHHHHHHHHHH---cCCC--CEEEEEcCcHHHHHHH---Hhc
Confidence 67778889999999885432 11111101 255555555554442 2210 1123444555554443 556
Q ss_pred cCCCceeEEEEccC
Q 020633 151 SEPNTWTGLIFSAP 164 (323)
Q Consensus 151 ~p~~~v~~~vl~~~ 164 (323)
+|. |++..+.++
T Consensus 84 ~pG--Iraalc~d~ 95 (211)
T PRK09273 84 FPG--VVCGYCIDP 95 (211)
T ss_pred CCC--eEEEEeCCH
Confidence 777 777776664
No 279
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=57.94 E-value=0.65 Score=36.81 Aligned_cols=106 Identities=25% Similarity=0.275 Sum_probs=60.4
Q ss_pred cEEEEEecCCCC---CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC----------CCcccCCCh
Q 020633 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD----------GIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~----------~~~~~~~~~ 107 (323)
.+....+.|... .+.|.+++.||+++... ........++..++.++..+...+|.+. ...... ..
T Consensus 32 ~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~ 109 (299)
T COG1073 32 ALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDF-SA 109 (299)
T ss_pred eeeeEEEecCCCCccccCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCcccccccc-ch
Confidence 355555666543 47899999999998876 4334778888888998887753333332 111100 00
Q ss_pred HHHh---hcHHHH-HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 108 EKVA---ASSLSF-FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 108 ~~~~---~d~~~~-l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.... ..+... ....... ..+....|.++|+..+..++...+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGAS----LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hheeeeccccccHHHHHHhhh----cCcceEEEEEeeccchHHHhhcch
Confidence 0000 010000 1111111 347888888888888888777765
No 280
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=56.29 E-value=18 Score=27.76 Aligned_cols=70 Identities=16% Similarity=0.094 Sum_probs=45.7
Q ss_pred ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc-HHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-SLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~~ 132 (323)
.|+||++.|+.+.. +..-..+...|..+|+.|.++..| +-++...+ +-.+-+.+-. .+++
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~-----~G~i 91 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHLPA-----AGEI 91 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhCCC-----CCeE
Confidence 68999999997553 336678888898999999998765 22332222 3333333332 4478
Q ss_pred EEEEechhHH
Q 020633 133 FLFGESMGGA 142 (323)
Q Consensus 133 ~l~G~S~Gg~ 142 (323)
.|+=-|+=+-
T Consensus 92 ~IF~rSwY~~ 101 (230)
T TIGR03707 92 VLFDRSWYNR 101 (230)
T ss_pred EEEeCchhhh
Confidence 8887776443
No 281
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=56.24 E-value=23 Score=25.60 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=19.4
Q ss_pred CeEEEEechhHHHHHHHhhhcCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
.-.+.|-|+|+.++..++...+.
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCCH
Confidence 56899999999999999887543
No 282
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=55.89 E-value=1.1e+02 Score=25.01 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=34.0
Q ss_pred EEEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCC
Q 020633 34 YFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGH 94 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~ 94 (323)
.|..+.+ ..||...+++- ...+++=+|+||.|... .-..+.++|.++ +..|+..|.-+.
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGG--TitgvGRylke~~~~~kVv~vdp~~S 250 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGG--TITGVGRYLKEQNPNIKVVGVDPQES 250 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCc--eeechhHHHHHhCCCCEEEEeCCCcc
Confidence 3455555 66666665531 12355668888886432 233455555544 578888886543
No 283
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=55.23 E-value=26 Score=27.75 Aligned_cols=83 Identities=24% Similarity=0.175 Sum_probs=45.3
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCc-------EEEEecCCCCcCCCCCcccCCChHHH--------hhcHHHHHHHH
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGY-------AVFAADLLGHGRSDGIRCYLGDMEKV--------AASSLSFFKHV 121 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~--------~~d~~~~l~~l 121 (323)
.-|++.|.|...--.-+.+...+.+.|. +++.+|..|-=..+... ....-..+ ..++.++++.+
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~-l~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD-LTPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc-chHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 3345566654332144556666666677 89999999863222111 00001111 23566666655
Q ss_pred HhcCCCCCCCeEEEEech-hHHHHHHHh
Q 020633 122 RDSEPYRDLPGFLFGESM-GGAATMLMY 148 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~-Gg~~a~~~a 148 (323)
+ +-+++|-|- ||.+.-...
T Consensus 105 ~--------ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 K--------PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred C--------CCEEEEeCCCCCCCCHHHH
Confidence 4 569999995 676544433
No 284
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=55.15 E-value=23 Score=26.15 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=18.5
Q ss_pred CeEEEEechhHHHHHHHhhhcC
Q 020633 131 PGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.-.++|-|.||.+|..++....
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred cceEEEECHHHHHHHHHHcCCC
Confidence 4589999999999999987643
No 285
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=55.11 E-value=33 Score=25.89 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=34.5
Q ss_pred ceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 55 KATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+.+|+++||-....- ...+...+.|.+.|..|-.-.++|.|.+- ..+...++.++|+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhh
Confidence 568999999875431 13456777888888878777777666542 24445666666553
No 286
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=54.78 E-value=33 Score=25.05 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=6.2
Q ss_pred CcEEEEecCCCCc
Q 020633 83 GYAVFAADLLGHG 95 (323)
Q Consensus 83 g~~v~~~d~~G~G 95 (323)
|+.++-+-+-|.|
T Consensus 33 ~~~~iNLGfsG~~ 45 (178)
T PF14606_consen 33 GLDVINLGFSGNG 45 (178)
T ss_dssp T-EEEEEE-TCCC
T ss_pred CCCeEeeeecCcc
Confidence 5666666554444
No 287
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=54.10 E-value=77 Score=22.95 Aligned_cols=85 Identities=14% Similarity=-0.042 Sum_probs=52.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--ccc--CCChH--HHhhcHHHHHHHHHhcCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--RCY--LGDME--KVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~--~~~~~--~~~~d~~~~l~~l~~~~~~~ 128 (323)
+..|-++.|..+. .-..-++.|+++|-.|+..|+|..+..+.. ... ..... .--+|+.+.+...+.+++
T Consensus 8 kglvalvtggasg---lg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg-- 82 (260)
T KOG1199|consen 8 KGLVALVTGGASG---LGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG-- 82 (260)
T ss_pred cCeeEEeecCccc---ccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc--
Confidence 4566666665433 334568899999999999999976544310 000 00011 112677788877777754
Q ss_pred CCCeEEEEechhHHHHHH
Q 020633 129 DLPGFLFGESMGGAATML 146 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~ 146 (323)
++-+.-.+.|-..+..
T Consensus 83 --rld~~vncagia~a~k 98 (260)
T KOG1199|consen 83 --RLDALVNCAGIAYAFK 98 (260)
T ss_pred --ceeeeeeccceeeeee
Confidence 7777777777655543
No 288
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=53.95 E-value=14 Score=29.46 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=16.5
Q ss_pred CeEEEEechhHHHHHHHhhh
Q 020633 131 PGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+-.++|||+|-+.|+.++..
T Consensus 83 p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred ccEEEecCHHHHHHHHHhCC
Confidence 67899999999988776643
No 289
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=53.46 E-value=76 Score=22.26 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.+.||.|+=+- -+. . . . .++.+++..+...+..=.. ..-|.+.|...|-.++ |.+.|
T Consensus 15 ~~l~~~L~~~g~eV~D~G--~~~-~--~--~-~dYpd~a~~va~~V~~~~~-----~~GIliCGtGiG~sia---ANK~~ 78 (143)
T TIGR01120 15 EEIKAFLVERGVKVIDKG--TWS-S--E--R-TDYPHYAKQVALAVAGGEV-----DGGILICGTGIGMSIA---ANKFA 78 (143)
T ss_pred HHHHHHHHHCCCEEEEeC--CCC-C--C--C-CCHHHHHHHHHHHHHCCCC-----ceEEEEcCCcHHHHHH---HhcCC
Confidence 457788888999885332 111 1 1 1 2566666666555532111 1235566666665554 55677
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++.++.++
T Consensus 79 G--Iraa~~~d~ 88 (143)
T TIGR01120 79 G--IRAALCSEP 88 (143)
T ss_pred C--eEEEEECCH
Confidence 6 777766654
No 290
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=53.20 E-value=76 Score=22.18 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-..+.++|.++||.|+ |+ |.+.| .++.+++..+...+..=.. ..-|.+.|...|-.++ |.+.
T Consensus 15 K~~i~~~L~~~G~eV~--D~-G~~~~-------~dYpd~a~~va~~V~~~e~-----~~GIliCGtGiG~sia---ANK~ 76 (141)
T TIGR01118 15 KDVIKNFLVDNGFEVI--DV-TEGDG-------QDFVDVTLAVASEVQKDEQ-----NLGIVIDAYGAGSFMV---ATKI 76 (141)
T ss_pred HHHHHHHHHHCCCEEE--Ec-CCCCC-------CCcHHHHHHHHHHHHcCCC-----ceEEEEcCCCHhHhhh---hhcC
Confidence 3457888988999885 43 22111 2556666655555532111 2236677777776655 5566
Q ss_pred CCCceeEEEEccC
Q 020633 152 EPNTWTGLIFSAP 164 (323)
Q Consensus 152 p~~~v~~~vl~~~ 164 (323)
+. |++.++.++
T Consensus 77 ~G--IRAA~~~d~ 87 (141)
T TIGR01118 77 KG--MIAAEVSDE 87 (141)
T ss_pred CC--eEEEEECCH
Confidence 66 777776654
No 291
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=52.93 E-value=87 Score=22.76 Aligned_cols=75 Identities=12% Similarity=0.021 Sum_probs=41.2
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-..+.++|.+.||.|+-+- ..+... .++.+++..+...+.. ... ..-|.+.|...|-.++ |.+.
T Consensus 15 K~~l~~~L~~~G~eV~D~G-----~~~~e~---~dYpd~a~~va~~V~~---g~~--d~GIliCGTGiG~sia---ANKv 78 (171)
T PRK08622 15 KMAVSDYLKSKGHEVIDVG-----TYDFTR---THYPIFGKKVGEAVAS---GEA--DLGVCICGTGVGISNA---VNKV 78 (171)
T ss_pred HHHHHHHHHHCCCEEEEcC-----CCCCCC---CChHHHHHHHHHHHHc---CCC--cEEEEEcCCcHHHHHH---HhcC
Confidence 3567888988999885332 111111 2456666555555522 211 1235566666665554 5566
Q ss_pred CCCceeEEEEccC
Q 020633 152 EPNTWTGLIFSAP 164 (323)
Q Consensus 152 p~~~v~~~vl~~~ 164 (323)
|. |++.++.++
T Consensus 79 ~G--IRAA~~~d~ 89 (171)
T PRK08622 79 PG--IRSALVRDM 89 (171)
T ss_pred CC--eEEEEeCCH
Confidence 66 777766654
No 292
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=52.84 E-value=1.3e+02 Score=25.59 Aligned_cols=75 Identities=11% Similarity=0.146 Sum_probs=39.8
Q ss_pred ceEEEEecCCCCC---ccccHHHHHHHHhhCCcEEEEecCCCC---cCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 55 KATVYMTHGYGSD---TGWMFQKICISFATWGYAVFAADLLGH---GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 55 ~~~vv~~HG~~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+.+||+++-.... .. ....-...|.+.|+.|+-+. +|+ |... .+...+.++.+..+...+.. . ...
T Consensus 116 ~~pvvi~Pamn~~m~~~p-~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~--~--~l~ 187 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENP-ATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSP--K--DLA 187 (399)
T ss_pred CCCEEEEeCCChhHcCCH-HHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhh--c--ccC
Confidence 3466666644321 12 34556677888899988654 343 2221 12233666666666655532 1 122
Q ss_pred CCCeEEEEe
Q 020633 129 DLPGFLFGE 137 (323)
Q Consensus 129 ~~~~~l~G~ 137 (323)
+.++.+.|-
T Consensus 188 gk~vlITgG 196 (399)
T PRK05579 188 GKRVLITAG 196 (399)
T ss_pred CCEEEEeCC
Confidence 456777777
No 293
>PLN02748 tRNA dimethylallyltransferase
Probab=52.57 E-value=1.3e+02 Score=26.28 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEec----CCCC--cCCC----------------CCcccCCChHHH
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAAD----LLGH--GRSD----------------GIRCYLGDMEKV 110 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d----~~G~--G~s~----------------~~~~~~~~~~~~ 110 (323)
.++.+|+|-|-.++.- ..++..|+.+ +..++..| |+|. |... -.+...++..++
T Consensus 20 ~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 4556777777655432 2344455544 56788888 3333 1111 112234588899
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEec
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
..+....|+.+..+ +.-.+|+|-|
T Consensus 97 ~~~A~~~I~~I~~r----gk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSR----NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhc----CCCeEEEcCh
Confidence 99999999998876 3345677655
No 294
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=52.54 E-value=58 Score=25.37 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=23.2
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 93 (323)
+++|-|..+. .-..+++.|+++|+.|+..+...
T Consensus 11 ~vlItG~s~g---IG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSG---IGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 3455565432 44578889999999999988653
No 295
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=52.48 E-value=26 Score=28.32 Aligned_cols=21 Identities=19% Similarity=0.146 Sum_probs=18.1
Q ss_pred CeEEEEechhHHHHHHHhhhc
Q 020633 131 PGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
.-.++|-|+|+.++..++...
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 457999999999999998864
No 296
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=52.06 E-value=1.5e+02 Score=25.37 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=40.9
Q ss_pred HHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHH-HHHHHhhhcCCC
Q 020633 76 CISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA-ATMLMYFQSEPN 154 (323)
Q Consensus 76 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~-~a~~~a~~~p~~ 154 (323)
...+..+++.++.+|-+|+... + ...++.+..+++...... ...++|+=-+..+. -....+..+...
T Consensus 292 ~~~l~~~~~D~VLIDTaGr~~r--------d-~~~l~eL~~~~~~~~~~~---~~e~~LVLsAt~~~~~~~~~~~~f~~~ 359 (432)
T PRK12724 292 KETLARDGSELILIDTAGYSHR--------N-LEQLERMQSFYSCFGEKD---SVENLLVLSSTSSYHHTLTVLKAYESL 359 (432)
T ss_pred HHHHHhCCCCEEEEeCCCCCcc--------C-HHHHHHHHHHHHhhcCCC---CCeEEEEEeCCCCHHHHHHHHHHhcCC
Confidence 3444446899999998765422 1 234455666655543221 12345554444444 555555555444
Q ss_pred ceeEEEEc
Q 020633 155 TWTGLIFS 162 (323)
Q Consensus 155 ~v~~~vl~ 162 (323)
.++++|+.
T Consensus 360 ~~~glIlT 367 (432)
T PRK12724 360 NYRRILLT 367 (432)
T ss_pred CCCEEEEE
Confidence 47888873
No 297
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=51.40 E-value=17 Score=29.11 Aligned_cols=21 Identities=24% Similarity=0.178 Sum_probs=17.2
Q ss_pred CCeEEEEechhHHHHHHHhhh
Q 020633 130 LPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+..++|||+|-+.|+.++..
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCC
Confidence 478999999999888876643
No 298
>PTZ00445 p36-lilke protein; Provisional
Probab=50.83 E-value=61 Score=24.52 Aligned_cols=66 Identities=17% Similarity=0.030 Sum_probs=41.2
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCC-------cCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechh
Q 020633 71 MFQKICISFATWGYAVFAADLLGH-------GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMG 140 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~-------G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~G 140 (323)
.-..+.+.|.+.|..+++.|+=.. |.-.+......-......++..++..+... +-+++|+-+|--
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~----~I~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS----NIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC----CCeEEEEEccch
Confidence 456678889999999999998643 111111000001122346677788888765 558999999854
No 299
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=50.49 E-value=17 Score=27.70 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=20.1
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
=||+.|=|.+.. +..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEecC
Confidence 456666553322 45688999999999973
No 300
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=50.15 E-value=35 Score=25.95 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=21.5
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.=||++|=|.+.. +..|+++||.|+.+|+-
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES-
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEecC
Confidence 4477787765433 45688899999999973
No 301
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=50.11 E-value=97 Score=22.52 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=39.9
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.+.||.|+ |+ |. .+... .++.+++..+...+. .... ..-|.+.|...|-.++ |.+.|
T Consensus 16 ~~l~~~L~~~G~eV~--D~-G~--~~~~~---~dYpd~a~~va~~V~---~g~~--d~GIliCGTGiG~sia---ANK~~ 79 (171)
T PRK12615 16 MAVSDFLKSKGYDVI--DC-GT--YDHTR---THYPIFGKKVGEAVV---NGQA--DLGVCICGTGVGINNA---VNKVP 79 (171)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC--CCCCC---CChHHHHHHHHHHHH---cCCC--CEEEEEcCCcHHHHHH---HhcCC
Confidence 467888988999885 43 21 11111 245555555555442 2211 1125566666665554 55666
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++.++.++
T Consensus 80 G--IRAA~~~d~ 89 (171)
T PRK12615 80 G--IRSALVRDM 89 (171)
T ss_pred C--eEEEEeCCH
Confidence 6 777666554
No 302
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=50.11 E-value=33 Score=26.10 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=18.3
Q ss_pred CeEEEEechhHHHHHHHhhhcC
Q 020633 131 PGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.-.++|-|.|+.++..++...+
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCCC
Confidence 4479999999999999987543
No 303
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=49.86 E-value=59 Score=27.33 Aligned_cols=109 Identities=14% Similarity=0.015 Sum_probs=58.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC-CCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP-YRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~ 131 (323)
....+|+++--..+... .-...++.+.+.|.-|+-.|..++=.-...... .---.+.|++++.+.+..-.. .....
T Consensus 46 ~~~~~villSd~~G~~d-~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~--ecvylisd~Ealsr~~Qr~a~~g~yr~ 122 (456)
T COG3946 46 DPQGLVILLSDEAGIGD-QERSRADALLARGALVAPVDLGAYLAALGADDN--ECVYLISDFEALSREAQRAADLGVYRL 122 (456)
T ss_pred CcceeeEEEEcccChhh-hhcchhHHHhhcCCeeeccccchhhhccccCCC--cceEEehhHHHHhHHHHHHhhccCccc
Confidence 33456666654333333 233456778788899999998876332211111 111122333333333322111 00223
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
-+|.|---||.++...+.+-|...+.+.+...+
T Consensus 123 PVl~g~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 123 PVLTGPGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred ceEeecCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 478889999999999888877654555554443
No 304
>PRK10279 hypothetical protein; Provisional
Probab=49.81 E-value=27 Score=28.08 Aligned_cols=21 Identities=14% Similarity=0.109 Sum_probs=18.2
Q ss_pred CeEEEEechhHHHHHHHhhhc
Q 020633 131 PGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
.-.++|-|+|+.++..+|...
T Consensus 34 ~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcCC
Confidence 458999999999999998764
No 305
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=49.51 E-value=21 Score=23.66 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=19.5
Q ss_pred cHHHHHHHHhhCCcEEEEecCC
Q 020633 71 MFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+..+++.|+++|+.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 6778899999999999999975
No 306
>PRK06490 glutamine amidotransferase; Provisional
Probab=49.31 E-value=1.2e+02 Score=23.45 Aligned_cols=84 Identities=13% Similarity=0.155 Sum_probs=44.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC-CCcC----CC-------CCcccCCChHHHhhcHHHHHHHHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL-GHGR----SD-------GIRCYLGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~----s~-------~~~~~~~~~~~~~~d~~~~l~~l~ 122 (323)
..++|+.|--.+... .+.+.|.+.|+.+-.++.. |--. .. +.+...++...+...+.++|+...
T Consensus 8 ~~vlvi~h~~~~~~g----~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~ 83 (239)
T PRK06490 8 RPVLIVLHQERSTPG----RVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPL 83 (239)
T ss_pred ceEEEEecCCCCCCh----HHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHH
Confidence 457777786654433 3455565666665554321 1000 00 111111222345555556666544
Q ss_pred hcCCCCCCCeEEEEechhHHHHHHHh
Q 020633 123 DSEPYRDLPGFLFGESMGGAATMLMY 148 (323)
Q Consensus 123 ~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
.. ++=++|.|+|..+...+.
T Consensus 84 ~~------~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 84 KE------NKPFLGICLGAQMLARHL 103 (239)
T ss_pred HC------CCCEEEECHhHHHHHHHc
Confidence 33 456999999998876654
No 307
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=49.18 E-value=1.2e+02 Score=24.73 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=36.5
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCC--C----cCCC----------------CCcccCCChHHHhh
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLG--H----GRSD----------------GIRCYLGDMEKVAA 112 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G--~----G~s~----------------~~~~~~~~~~~~~~ 112 (323)
+.+|++-|-.++.. ..++..|++. +..++..|-.= . |... ......++..++.+
T Consensus 4 ~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 4 PKVIVIVGPTASGK---TALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred ceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 45667777655432 2455555554 56677777531 1 1111 01112246777888
Q ss_pred cHHHHHHHHHhc
Q 020633 113 SSLSFFKHVRDS 124 (323)
Q Consensus 113 d~~~~l~~l~~~ 124 (323)
+....++.+...
T Consensus 81 ~a~~~i~~i~~~ 92 (307)
T PRK00091 81 DALAAIADILAR 92 (307)
T ss_pred HHHHHHHHHHhC
Confidence 888888877665
No 308
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=48.82 E-value=1e+02 Score=24.95 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=25.0
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
|+..-|.| . .-...+..|.+.||.|+.+|--..|...
T Consensus 3 iLVtGGAG-Y---IGSHtv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 3 VLVTGGAG-Y---IGSHTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred EEEecCcc-h---hHHHHHHHHHHCCCeEEEEecCCCCCHH
Confidence 44444444 2 2335677888899999999987666544
No 309
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=48.73 E-value=10 Score=26.95 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=28.1
Q ss_pred ecCCCCcCCCC--CcccCCChHHHhhcHHHHHHHHHhcCC--CCCCCeEEEEechhHH
Q 020633 89 ADLLGHGRSDG--IRCYLGDMEKVAASSLSFFKHVRDSEP--YRDLPGFLFGESMGGA 142 (323)
Q Consensus 89 ~d~~G~G~s~~--~~~~~~~~~~~~~d~~~~l~~l~~~~~--~~~~~~~l~G~S~Gg~ 142 (323)
+-+-|||.... ..-...+.++++.-+..+-+.+..... ..+.+|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34457776621 111123566666666555566665432 2356899999999877
No 310
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=48.35 E-value=11 Score=28.81 Aligned_cols=38 Identities=13% Similarity=0.213 Sum_probs=27.1
Q ss_pred ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.|+||++.|+.++. +..-..+...|-.+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 57999999997664 325566777777889999999866
No 311
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=47.67 E-value=20 Score=28.51 Aligned_cols=20 Identities=25% Similarity=0.414 Sum_probs=16.7
Q ss_pred CeEEEEechhHHHHHHHhhh
Q 020633 131 PGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+..++|||+|=+.|+.++..
T Consensus 84 p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCEEeecCHHHHHHHHHhCC
Confidence 67899999999988777654
No 312
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=47.45 E-value=26 Score=27.70 Aligned_cols=20 Identities=20% Similarity=0.135 Sum_probs=17.5
Q ss_pred eEEEEechhHHHHHHHhhhc
Q 020633 132 GFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-.+.|-|+|+.++..+|...
T Consensus 40 d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 40 DAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred cEEEEECHHHHHHHHHHcCC
Confidence 47999999999999998863
No 313
>COG3933 Transcriptional antiterminator [Transcription]
Probab=47.38 E-value=1.3e+02 Score=25.75 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=50.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
-.+||+.||....+ .....+..|.+. --+.++|+|- ..++.+..+.+.+.+++.... +=++
T Consensus 109 v~vIiiAHG~sTAS--SmaevanrLL~~-~~~~aiDMPL----------dvsp~~vle~l~e~~k~~~~~------~Gll 169 (470)
T COG3933 109 VKVIIIAHGYSTAS--SMAEVANRLLGE-EIFIAIDMPL----------DVSPSDVLEKLKEYLKERDYR------SGLL 169 (470)
T ss_pred eeEEEEecCcchHH--HHHHHHHHHhhc-cceeeecCCC----------cCCHHHHHHHHHHHHHhcCcc------CceE
Confidence 46899999997543 456778888777 5689999981 126677667777666665543 3355
Q ss_pred EEechhHHHHHHHh
Q 020633 135 FGESMGGAATMLMY 148 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a 148 (323)
+=-.||......=.
T Consensus 170 lLVDMGSL~~f~~~ 183 (470)
T COG3933 170 LLVDMGSLTSFGSI 183 (470)
T ss_pred EEEecchHHHHHHH
Confidence 56689988766433
No 314
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.31 E-value=35 Score=25.80 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=19.0
Q ss_pred CeEEEEechhHHHHHHHhhhcC
Q 020633 131 PGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.-.+.|.|.|+.+|..++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 4579999999999999998764
No 315
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=47.30 E-value=58 Score=23.68 Aligned_cols=32 Identities=13% Similarity=0.269 Sum_probs=21.0
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
-|++.|.|.+.. .-..+...|..-|..+...+
T Consensus 32 ~I~i~G~G~S~~-~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGL-VGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHH-HHHHHHHHHHhCCCeEEEeC
Confidence 367777775543 44556666777788887764
No 316
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=46.05 E-value=1e+02 Score=21.60 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=42.1
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-..+.++|.+.||.|+ |+ |. .. . .++.+++..+...+.. ... ..-|.+.|...|-.++ |.+.
T Consensus 15 K~~l~~~L~~~G~eV~--D~-G~--~~---~--~dYpd~a~~va~~V~~---~~~--~~GIliCGTGiG~sia---ANK~ 76 (142)
T PRK08621 15 KEVVKDYLEDNKYEVV--DV-TE--EG---A--EDFVDSTLAVAKEVNK---SED--NLGIVIDAYGAGSFMV---ATKI 76 (142)
T ss_pred HHHHHHHHHHCCCEEE--EC-CC--CC---C--CCcHHHHHHHHHHHHc---CCC--ceEEEEcCCChhhhhh---hhcC
Confidence 3567888988999886 54 22 11 1 2455665555554422 210 2236677777776654 5566
Q ss_pred CCCceeEEEEccC
Q 020633 152 EPNTWTGLIFSAP 164 (323)
Q Consensus 152 p~~~v~~~vl~~~ 164 (323)
|. |++..+.++
T Consensus 77 ~G--IRAA~~~d~ 87 (142)
T PRK08621 77 KG--MVAAEVSDE 87 (142)
T ss_pred CC--eEEEEECCH
Confidence 66 777766553
No 317
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=45.98 E-value=34 Score=26.70 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=46.1
Q ss_pred HHHHHhhCCcEEEEecCCCC-cCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH----HHhh
Q 020633 75 ICISFATWGYAVFAADLLGH-GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM----LMYF 149 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~ 149 (323)
.++.+++.|-.++++.+--. |.+.+.. ...++++.++.+.++.+......+ .++++.| ||.++. .+..
T Consensus 162 ~A~~M~~AGaDiiv~H~GlT~gG~~Ga~-~~~sl~~a~~~~~~i~~aa~~v~~----dii~l~h--GGPI~~p~D~~~~l 234 (268)
T PF09370_consen 162 QARAMAEAGADIIVAHMGLTTGGSIGAK-TALSLEEAAERIQEIFDAARAVNP----DIIVLCH--GGPIATPEDAQYVL 234 (268)
T ss_dssp HHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-T----T-EEEEE--CTTB-SHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCccCCCCcCcc-ccCCHHHHHHHHHHHHHHHHHhCC----CeEEEEe--CCCCCCHHHHHHHH
Confidence 35667778889999876322 2222222 234889999999999888877643 6788877 777652 3333
Q ss_pred hcCCCceeEEEEccCc
Q 020633 150 QSEPNTWTGLIFSAPL 165 (323)
Q Consensus 150 ~~p~~~v~~~vl~~~~ 165 (323)
++-.. +.+.+--++.
T Consensus 235 ~~t~~-~~Gf~G~Ss~ 249 (268)
T PF09370_consen 235 RNTKG-IHGFIGASSM 249 (268)
T ss_dssp HH-TT-EEEEEESTTT
T ss_pred hcCCC-CCEEecccch
Confidence 33333 7787776654
No 318
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=45.75 E-value=52 Score=25.23 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=38.0
Q ss_pred cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE--EEEechhHHHHH
Q 020633 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF--LFGESMGGAATM 145 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~--l~G~S~Gg~~a~ 145 (323)
=-|+.+|-+|...+.... ..-+......+...+...+.. +.+++ |+|++++|....
T Consensus 66 pIv~lVD~~sQa~grreE--llGi~~alAhla~a~a~AR~~----GHpvI~Lv~G~A~SGaFLA 123 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREE--LLGINQALAHLAKAYALARLA----GHPVIGLVYGKAMSGAFLA 123 (234)
T ss_pred CEEEEEeCCccccchHHH--HhhHHHHHHHHHHHHHHHHHc----CCCeEEEEecccccHHHHH
Confidence 468889999887775332 225666666677777777766 44765 889999765543
No 319
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=45.20 E-value=44 Score=24.22 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=18.9
Q ss_pred CeEEEEechhHHHHHHHhhhcCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
.-.+.|-|.|+.++..++.....
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCCH
Confidence 45799999999999998876543
No 320
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=44.56 E-value=21 Score=28.96 Aligned_cols=19 Identities=21% Similarity=0.482 Sum_probs=16.8
Q ss_pred EEEEechhHHHHHHHhhhc
Q 020633 133 FLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~ 151 (323)
.+.|-|+||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6999999999999998754
No 321
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=44.35 E-value=1.1e+02 Score=21.65 Aligned_cols=75 Identities=12% Similarity=0.019 Sum_probs=42.6
Q ss_pred HHHHHHHHhh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 72 FQKICISFAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 72 ~~~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
-..+.++|.+ .||.|+-+ |...... .++.+++..+...+. .... ..-|.+.|..+|-.++ |.
T Consensus 17 K~~l~~~L~~~~~g~eV~D~-----G~~~~~~---~dYp~~a~~va~~V~---~~~~--~~GIliCGtGiG~sia---AN 80 (151)
T PTZ00215 17 KNEIIDYIKNKGKEYKIEDM-----GTYTAES---VDYPDFAEKVCEEVL---KGEA--DTGILVCGSGIGISIA---AN 80 (151)
T ss_pred HHHHHHHHHhccCCCEEEEc-----CCCCCCC---CCHHHHHHHHHHHHh---cCCC--cEEEEEcCCcHHHHHH---Hh
Confidence 3467888988 89988643 2111111 255666555555543 2211 1236677777776655 55
Q ss_pred hcCCCceeEEEEccC
Q 020633 150 QSEPNTWTGLIFSAP 164 (323)
Q Consensus 150 ~~p~~~v~~~vl~~~ 164 (323)
++|. |++.++.++
T Consensus 81 K~~G--IRAa~~~d~ 93 (151)
T PTZ00215 81 KVKG--IRCALCHDH 93 (151)
T ss_pred cCCC--eEEEEECCH
Confidence 6666 777777654
No 322
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=44.27 E-value=1.6e+02 Score=23.38 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=39.5
Q ss_pred CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE-EEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 83 GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL-FGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 83 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l-~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
++.++.+|.+|..... ....+.+.++++... +..+++ +.-++++.-+...+..+....++++|+
T Consensus 154 ~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~~------~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYRA---------SETVEEMIETMGQVE------PDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcCC---------HHHHHHHHHHHhhhC------CCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 6899999998764321 223344445544332 223454 445677777777777765555888887
Q ss_pred c
Q 020633 162 S 162 (323)
Q Consensus 162 ~ 162 (323)
.
T Consensus 219 T 219 (270)
T PRK06731 219 T 219 (270)
T ss_pred E
Confidence 4
No 323
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=44.26 E-value=33 Score=27.73 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=17.6
Q ss_pred CCCeEEEEechhHHHHHHHhh
Q 020633 129 DLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
..+..+.|||+|=+.|+.++.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 457899999999999887665
No 324
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=43.93 E-value=1.5e+02 Score=23.12 Aligned_cols=18 Identities=11% Similarity=0.253 Sum_probs=9.1
Q ss_pred HHHHHHHHhhCCcEEEEe
Q 020633 72 FQKICISFATWGYAVFAA 89 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~ 89 (323)
-..+...+++.|.++|-+
T Consensus 69 Vkall~~y~~~GLRlIev 86 (249)
T PF05673_consen 69 VKALLNEYADQGLRLIEV 86 (249)
T ss_pred HHHHHHHHhhcCceEEEE
Confidence 344445555555555544
No 325
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=43.77 E-value=48 Score=23.97 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=17.7
Q ss_pred CeEEEEechhHHHHHHHhhhc
Q 020633 131 PGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
.-.++|-|.|+.+|..++...
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCC
Confidence 357999999999999988653
No 326
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.55 E-value=1.8e+02 Score=23.74 Aligned_cols=115 Identities=13% Similarity=-0.070 Sum_probs=54.4
Q ss_pred CCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
..+|.++|-|+++.++-.+-.. .|. |.-........++.......|+ ..+...+.... ....+--.+
T Consensus 116 a~kvLvvGDslm~gla~gl~~al~t~~~--i~i~~~sn~SSGlvr~dYfdWp-k~i~~~l~~~~-------~~a~vVV~l 185 (354)
T COG2845 116 ADKVLVVGDSLMQGLAEGLDKALATSPG--ITIVTRSNGSSGLVRDDYFDWP-KAIPELLDKHP-------KPAAVVVML 185 (354)
T ss_pred CCEEEEechHHhhhhHHHHHHHhccCCC--cEEEEeecCCCCcccccccccH-HHHHHHHHhcC-------CccEEEEEe
Confidence 5689999999998887654433 244 4444444443333332222221 11111111110 000000011
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEe
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
.....+++...+ .+....+..|..++.+..+.+.....+-.+|++.+-
T Consensus 186 GaND~q~~~~gd--~~~kf~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvG 233 (354)
T COG2845 186 GANDRQDFKVGD--VYEKFRSDEWTKEYEKRVDAILKIAHTHKVPVLWVG 233 (354)
T ss_pred cCCCHHhcccCC--eeeecCchHHHHHHHHHHHHHHHHhcccCCcEEEee
Confidence 111111111111 222334556777777777777777777788888774
No 327
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=43.16 E-value=72 Score=21.43 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=11.0
Q ss_pred HHHHhhCCcEEEEe
Q 020633 76 CISFATWGYAVFAA 89 (323)
Q Consensus 76 ~~~l~~~g~~v~~~ 89 (323)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45677889999876
No 328
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=42.67 E-value=1.8e+02 Score=23.36 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=28.4
Q ss_pred HHHHHHhhCCcE--EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHH
Q 020633 74 KICISFATWGYA--VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA 142 (323)
Q Consensus 74 ~~~~~l~~~g~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~ 142 (323)
...+.+.+.|.. =+.+|. |.|.+. +.++.. .+..-++.++.- +.-+++|+|-=..
T Consensus 167 ~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~n~-~ll~~l~~l~~l-----g~Pilvg~SRKsf 223 (282)
T PRK11613 167 EQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSHNY-QLLARLAEFHHF-----NLPLLVGMSRKSM 223 (282)
T ss_pred HHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHHHH-HHHHHHHHHHhC-----CCCEEEEecccHH
Confidence 344556667875 677884 777653 222222 222333344321 1347899994333
No 329
>COG0698 RpiB Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]
Probab=41.65 E-value=1.3e+02 Score=21.40 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.+.||.|+ |+-.+... .. .++.+++..+.+.+..=.. +.-|.+.|...|-.++ |.+.|
T Consensus 16 ~~I~~~Lk~~g~~v~--D~G~~~~~---~~--~dyp~~a~~va~~v~~~~~-----d~GIliCGTGiG~~ia---ANKv~ 80 (151)
T COG0698 16 EIIIDHLKSKGYEVI--DFGTYTDE---GS--VDYPDYAKKVAEAVLNGEA-----DLGILICGTGIGMSIA---ANKVP 80 (151)
T ss_pred HHHHHHHHHCCCEEE--eccccCCC---CC--cchHHHHHHHHHHHHcCCC-----CeeEEEecCChhHHHH---hhccC
Confidence 457788988899887 33222111 00 1445555544444322111 2236677777776665 45666
Q ss_pred CCceeEEEEccCc
Q 020633 153 PNTWTGLIFSAPL 165 (323)
Q Consensus 153 ~~~v~~~vl~~~~ 165 (323)
. |++..+.++.
T Consensus 81 G--iraAl~~D~~ 91 (151)
T COG0698 81 G--IRAALVSDPT 91 (151)
T ss_pred C--eEEEEecCHH
Confidence 6 6666665543
No 330
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=41.49 E-value=41 Score=24.28 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=24.3
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEe
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA 89 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~ 89 (323)
+.+.|+++-|-|.+.. .--..++.|..+|+.|.++
T Consensus 24 ~~~~v~il~G~GnNGg-Dgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGG-DGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHH-HHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChH-HHHHHHHHHHHCCCeEEEE
Confidence 3567777777776655 4446788999999998883
No 331
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=40.48 E-value=35 Score=27.53 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=18.7
Q ss_pred CeEEEEechhHHHHHHHhhhcC
Q 020633 131 PGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.-+|.|-|+|+.++..+|....
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCCC
Confidence 5689999999999999998643
No 332
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=40.15 E-value=1.3e+02 Score=22.38 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=43.0
Q ss_pred HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CC
Q 020633 75 ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EP 153 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~ 153 (323)
..+.+.++++.++.+|-+|... .-.+..+++..+++.+. +..++++=-+..+.-.+..+..+ ..
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~------~~~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALN------PDEVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHS------SSEEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcC------CccceEEEecccChHHHHHHHHHhhc
Confidence 4445556789999999987642 23455677777777763 33566665555555555444432 21
Q ss_pred CceeEEEEc
Q 020633 154 NTWTGLIFS 162 (323)
Q Consensus 154 ~~v~~~vl~ 162 (323)
..+.++|+.
T Consensus 140 ~~~~~lIlT 148 (196)
T PF00448_consen 140 FGIDGLILT 148 (196)
T ss_dssp SSTCEEEEE
T ss_pred ccCceEEEE
Confidence 127788874
No 333
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=40.04 E-value=39 Score=27.68 Aligned_cols=41 Identities=29% Similarity=0.364 Sum_probs=26.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
+++.++|++=|--+.+. ..+.-+..|++.||.| |+-|++.|
T Consensus 11 ~k~ra~vvVLGDvGRSP-RMqYHA~Sla~~gf~V---dliGy~~s 51 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRSP-RMQYHALSLAKLGFQV---DLIGYVES 51 (444)
T ss_pred ccceEEEEEecccCCCh-HHHHHHHHHHHcCCeE---EEEEecCC
Confidence 34555555555444444 5666677899999776 55577666
No 334
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=39.97 E-value=1.4e+02 Score=21.33 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=39.8
Q ss_pred HHHHHHhhCCc-EEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEec-hhHHHHHHHhhhc
Q 020633 74 KICISFATWGY-AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGES-MGGAATMLMYFQS 151 (323)
Q Consensus 74 ~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 151 (323)
.+.+.+...|. +|+.++.+... .++.+.+++-+.++++... ..++++|++ .|.-++.++|.+.
T Consensus 49 ~l~~~l~~~G~d~v~~~~~~~~~--------~~~~~~~a~~l~~~~~~~~-------~~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 49 ALRKALAKYGADKVYHIDDPALA--------EYDPEAYADALAELIKEEG-------PDLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHHSTTESEEEEEE-GGGT--------TC-HHHHHHHHHHHHHHHT--------SEEEEESSHHHHHHHHHHHHHH
T ss_pred HHhhhhhhcCCcEEEEecCcccc--------ccCHHHHHHHHHHHHHhcC-------CCEEEEcCcCCCCcHHHHHHHHh
Confidence 34455665776 58888765332 1256777778888877743 258888887 5666777777763
No 335
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=39.96 E-value=45 Score=26.41 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=23.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
-|.|+|.-|.++ ..+.|+..||.|+.+|+-
T Consensus 252 vPmi~fakG~g~--------~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSGG--------ALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcch--------HHHHHHhcCCcEEeeccc
Confidence 488899888763 256788889999999974
No 336
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2
Probab=39.60 E-value=66 Score=27.61 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=50.7
Q ss_pred ecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-------cC------CChHHHhhc
Q 020633 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-------YL------GDMEKVAAS 113 (323)
Q Consensus 47 ~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-------~~------~~~~~~~~d 113 (323)
++....+++-+||=..+.+... .+..+.+.|.++||.++..|.+---.-.+... .. ..+-...+.
T Consensus 179 ~~~~~~~P~IAIvDf~~~~~~~--Ef~~f~~~f~~~G~~~vI~d~~~L~y~~g~L~~~~~~ID~VyRR~Vt~e~l~~~d~ 256 (445)
T PF14403_consen 179 FGGRVEKPNIAIVDFLEYPTLS--EFEVFQRLFEEHGYDCVICDPRDLEYRDGRLYAGGRPIDAVYRRFVTSELLERYDE 256 (445)
T ss_pred hcCcCCCCcEEEEecccCCccc--hHHHHHHHHHHcCCceEecChHHceecCCEEEECCEeeehhhHhhhhHHhhhcccc
Confidence 3333334566777778865443 57889999999999999998774432221100 00 012222346
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMG 140 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~G 140 (323)
+..++++.... .+.++|..-+
T Consensus 257 ~~~li~Ay~~~------av~~vgsfrs 277 (445)
T PF14403_consen 257 VQPLIQAYRDG------AVCMVGSFRS 277 (445)
T ss_pred chHHHHHHhcC------CeEEecchhh
Confidence 66777777643 6777776543
No 337
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=39.56 E-value=1.3e+02 Score=21.04 Aligned_cols=72 Identities=11% Similarity=0.006 Sum_probs=42.1
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-..+.++|.+.||.|+ |+ |. .| .++.+++..+...+..=.. ..-|.+.|...|-.++ |.+.
T Consensus 15 K~~l~~~L~~~g~eV~--D~-G~-~~-------~dypd~a~~va~~V~~~e~-----~~GIliCGtGiG~sia---ANKv 75 (141)
T PRK12613 15 KELIKSFLQEEGYDII--DV-TD-IN-------SDFIDNTLAVAKAVNEAEG-----RLGIMVDAYGAGPFMV---ATKL 75 (141)
T ss_pred HHHHHHHHHHCCCEEE--Ec-CC-CC-------CChHHHHHHHHHHHHcCCC-----ceEEEEcCCCHhHhhh---hhcC
Confidence 3457888988999885 43 22 11 2556666555555522111 2236677777776654 5566
Q ss_pred CCCceeEEEEccC
Q 020633 152 EPNTWTGLIFSAP 164 (323)
Q Consensus 152 p~~~v~~~vl~~~ 164 (323)
+. |++.++.++
T Consensus 76 ~G--IRaA~~~d~ 86 (141)
T PRK12613 76 KG--MVAAEVSDE 86 (141)
T ss_pred CC--eEEEEECCH
Confidence 65 777766554
No 338
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=39.27 E-value=82 Score=22.84 Aligned_cols=53 Identities=8% Similarity=0.063 Sum_probs=35.5
Q ss_pred HhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechh
Q 020633 79 FATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMG 140 (323)
Q Consensus 79 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~G 140 (323)
|.+.|++.+.+|.=+.=... .-.+...++.+.++.++...+ ..++.++-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------~~~~i~~~~~~~~~~l~~~~~--~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------YEDEIPPEYAEWLNELKKQFG--KDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------CcCcCCHHHHHHHHHHHHHCC--CCeEEEEECCCC
Confidence 77889999999986542111 223334556677777776653 346999999986
No 339
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=39.03 E-value=31 Score=28.41 Aligned_cols=40 Identities=20% Similarity=0.231 Sum_probs=30.1
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCC--------CcceEEEEecCCCCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQ--------KVKATVYMTHGYGSD 67 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~--------~~~~~vv~~HG~~~~ 67 (323)
.+++.......|| ++-|..||++.+ -++|+|+++|-+.+.
T Consensus 449 ~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 449 HPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 3456677777889 988999996542 478999999988643
No 340
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.80 E-value=55 Score=25.74 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=19.2
Q ss_pred eEEEEechhHHHHHHHhhhcCCC
Q 020633 132 GFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
-.++|-|.|+.++..++......
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcch
Confidence 37999999999999998875543
No 341
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=38.75 E-value=42 Score=25.52 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.2
Q ss_pred HHHHhhCCcEEEEecC
Q 020633 76 CISFATWGYAVFAADL 91 (323)
Q Consensus 76 ~~~l~~~g~~v~~~d~ 91 (323)
+..|+++|+.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 3457789999999996
No 342
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=38.42 E-value=2.2e+02 Score=23.14 Aligned_cols=75 Identities=12% Similarity=0.072 Sum_probs=45.0
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecC----CCC--cCCC----------------CCcccCCChHHHhhcH
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADL----LGH--GRSD----------------GIRCYLGDMEKVAASS 114 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~d~ 114 (323)
.||+|-|-.++.. ..++-.|++++-.+|..|- +|. |... -.+...++...+.++.
T Consensus 5 ~ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 3666666655432 2445556665557888884 333 2211 1122335788899999
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEec
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
...++.+... +...+|+|-|
T Consensus 82 ~~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHC----CCCEEEEeCc
Confidence 9999988766 3345677655
No 343
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.24 E-value=1.4e+02 Score=24.02 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=27.7
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCc
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 95 (323)
..-+++|-|.|+. .-+.++..|+++|..++.+|.-..|
T Consensus 37 ~g~~vLITGgg~G---lGr~ialefa~rg~~~vl~Din~~~ 74 (300)
T KOG1201|consen 37 SGEIVLITGGGSG---LGRLIALEFAKRGAKLVLWDINKQG 74 (300)
T ss_pred cCCEEEEeCCCch---HHHHHHHHHHHhCCeEEEEeccccc
Confidence 3456677776643 4567888999999999999976544
No 344
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=38.05 E-value=98 Score=26.19 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHH
Q 020633 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~ 143 (323)
+..+.+.+.+.|+.-+=+|+-......+..........+...+.++++.|....+ .+.+=+.|.||.-
T Consensus 172 ~~~i~~ll~~~gidYiK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~L~~~~P----~v~iE~CssGG~R 239 (394)
T PF02065_consen 172 FEVIDRLLREWGIDYIKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLDRLRARFP----DVLIENCSSGGGR 239 (394)
T ss_dssp HHHHHHHHHHTT-SEEEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHHHHHHTT----TSEEEE-BTTBTT
T ss_pred HHHHHHHHHhcCCCEEEeccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhCC----CcEEEeccCCCCc
Confidence 3445566778899999999864322211111112356666778889999999876 7888888888653
No 345
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=37.70 E-value=2.1e+02 Score=23.57 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=11.5
Q ss_pred CCCeEEEEechhHHH
Q 020633 129 DLPGFLFGESMGGAA 143 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~ 143 (323)
..+++|+=|++=|..
T Consensus 136 ~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 136 PPPLYLVIHNIDGPS 150 (326)
T ss_pred CCceEEEEECCCChh
Confidence 348999999987655
No 346
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.42 E-value=1.2e+02 Score=26.34 Aligned_cols=87 Identities=16% Similarity=0.224 Sum_probs=48.9
Q ss_pred EecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEech
Q 020633 60 MTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESM 139 (323)
Q Consensus 60 ~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~ 139 (323)
|=-|+|.+....-..-+++-..+||.|+.+|--|.-.. -+.+...+..+++.-. ++.|+.+|.-+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~~------pd~i~~vgeal 507 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVNK------PDLILFVGEAL 507 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC---------ChhHHHHHHHHHhcCC------CceEEEehhhh
Confidence 33455555432333344555567999999998765332 1223344444444332 55788999887
Q ss_pred hHHHHHHHhhh---------cCCCceeEEEEc
Q 020633 140 GGAATMLMYFQ---------SEPNTWTGLIFS 162 (323)
Q Consensus 140 Gg~~a~~~a~~---------~p~~~v~~~vl~ 162 (323)
=|.=++.-+.. .|.. ++++++.
T Consensus 508 vg~dsv~q~~~fn~al~~~~~~r~-id~~~lt 538 (587)
T KOG0781|consen 508 VGNDSVDQLKKFNRALADHSTPRL-IDGILLT 538 (587)
T ss_pred hCcHHHHHHHHHHHHHhcCCCccc-cceEEEE
Confidence 77655443322 2334 7777764
No 347
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=37.32 E-value=1.2e+02 Score=19.89 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=41.1
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
..|+|||.--+...+. ....+...+. -.+.|+-+|...+| .++...+..+..... -..+.
T Consensus 13 ~~~VVifSKs~C~~c~-~~k~ll~~~~-v~~~vvELD~~~~g----------------~eiq~~l~~~tg~~t--vP~vF 72 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCH-RAKELLSDLG-VNPKVVELDEDEDG----------------SEIQKALKKLTGQRT--VPNVF 72 (104)
T ss_pred cCCEEEEECCcCchHH-HHHHHHHhCC-CCCEEEEccCCCCc----------------HHHHHHHHHhcCCCC--CCEEE
Confidence 3678888874443222 2222222222 23677877765333 134444444432221 23678
Q ss_pred EEEechhHHHHHHHhhh
Q 020633 134 LFGESMGGAATMLMYFQ 150 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~ 150 (323)
|-|.+.||.--+.....
T Consensus 73 I~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 73 IGGKFIGGASDLMALHK 89 (104)
T ss_pred ECCEEEcCHHHHHHHHH
Confidence 88999999876655544
No 348
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.22 E-value=19 Score=28.30 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=11.7
Q ss_pred CCCeEEEEechhHH
Q 020633 129 DLPGFLFGESMGGA 142 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~ 142 (323)
...|+++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 45899999999974
No 349
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=36.93 E-value=75 Score=27.21 Aligned_cols=42 Identities=12% Similarity=-0.017 Sum_probs=25.2
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 295 (323)
.-+++++|+.|+...... .+.. +.....++++|++|..-+..
T Consensus 377 tnviFtNG~~DPW~~lgv----~~~~-~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGV----TSDS-SDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-S-SSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCcccccC----CCCC-CCCcccEEECCCeeeccccC
Confidence 479999999999876542 1222 24456678999999887543
No 350
>COG0218 Predicted GTPase [General function prediction only]
Probab=36.93 E-value=21 Score=26.47 Aligned_cols=64 Identities=13% Similarity=0.320 Sum_probs=36.2
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchhH---HHHHHHcC-CCCcc--EEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTSS---KLLYEKAS-SADKS--IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~---~~~~~~~~-~~~~~--~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+....+|++++.-..|.+-..+.. ....+.+. .+... +..++-... ...+++...|.+|+..
T Consensus 129 ~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k--------~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 129 EFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKK--------KGIDELKAKILEWLKE 198 (200)
T ss_pred HHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccc--------cCHHHHHHHHHHHhhc
Confidence 44455689999999999998765443 33333332 11122 333332211 2245577888887754
No 351
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=36.62 E-value=1.8e+02 Score=21.82 Aligned_cols=39 Identities=18% Similarity=0.114 Sum_probs=23.9
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
..+.|+++.-...........+.+.+.+.|..+..+...
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEecc
Confidence 356677776555443324556667777778877765543
No 352
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=36.38 E-value=72 Score=24.83 Aligned_cols=20 Identities=20% Similarity=0.195 Sum_probs=17.3
Q ss_pred EEEEechhHHHHHHHhhhcC
Q 020633 133 FLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p 152 (323)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987644
No 353
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=36.36 E-value=52 Score=24.23 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=19.0
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
|.+.|.|- .-..++..|++.|+.|+.+|.-
T Consensus 3 I~ViGlGy----vGl~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 3 IAVIGLGY----VGLPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEEE--ST----THHHHHHHHHHTTSEEEEE-S-
T ss_pred EEEECCCc----chHHHHHHHHhCCCEEEEEeCC
Confidence 34456663 2336788899999999999964
No 354
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=36.21 E-value=87 Score=21.77 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=25.2
Q ss_pred EEEecCCCCC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 58 VYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 58 vv~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
+|.+-|...+ ....-..++..|.++||+|.++=.-+||...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 4555555433 3436678889999999999876666676553
No 355
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=35.77 E-value=46 Score=28.39 Aligned_cols=24 Identities=17% Similarity=0.429 Sum_probs=19.4
Q ss_pred CeEEEEechhHHHHHHHhhhcCCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
+-++.|-|.|+.+|..++...++.
T Consensus 102 p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHH
Confidence 448999999999999988865443
No 356
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=35.71 E-value=67 Score=24.92 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=17.8
Q ss_pred EEEEechhHHHHHHHhhhcC
Q 020633 133 FLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p 152 (323)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999988654
No 357
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=35.50 E-value=2.7e+02 Score=23.52 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=46.0
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
-.|++.--++.+.. .-+.+++.|.+.|..|..+++.- .|..++++.+.. .+.+++
T Consensus 249 V~l~Y~smyg~T~~-ma~aiaegl~~~gv~v~~~~~~~------------------~~~~eI~~~i~~------a~~~vv 303 (388)
T COG0426 249 VDLIYDSMYGNTEK-MAQAIAEGLMKEGVDVEVINLED------------------ADPSEIVEEILD------AKGLVV 303 (388)
T ss_pred EEEEEecccCCHHH-HHHHHHHHhhhcCCceEEEEccc------------------CCHHHHHHHHhh------cceEEE
Confidence 34444444443334 77788889999999999988641 134444444442 267899
Q ss_pred Eec---------hhHHHHHHHhhhcCCC
Q 020633 136 GES---------MGGAATMLMYFQSEPN 154 (323)
Q Consensus 136 G~S---------~Gg~~a~~~a~~~p~~ 154 (323)
|-+ ++..+....+...+.+
T Consensus 304 GsPT~~~~~~p~i~~~l~~v~~~~~~~k 331 (388)
T COG0426 304 GSPTINGGAHPPIQTALGYVLALAPKNK 331 (388)
T ss_pred ecCcccCCCCchHHHHHHHHHhccCcCc
Confidence 988 5556666666665555
No 358
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=35.50 E-value=1.4e+02 Score=27.20 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=30.4
Q ss_pred CcceEEEEecCCCCCccc--cHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 53 KVKATVYMTHGYGSDTGW--MFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
+-+.++++|||.....-. .-..+...|...|..|-..-+|+-|.+
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 457899999998754221 334567788778888777777754433
No 359
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=35.21 E-value=49 Score=25.06 Aligned_cols=16 Identities=25% Similarity=0.262 Sum_probs=13.4
Q ss_pred HHHHhhCCcEEEEecC
Q 020633 76 CISFATWGYAVFAADL 91 (323)
Q Consensus 76 ~~~l~~~g~~v~~~d~ 91 (323)
+..|+++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 4467789999999996
No 360
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=35.17 E-value=1e+02 Score=24.71 Aligned_cols=27 Identities=4% Similarity=-0.044 Sum_probs=19.5
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEe
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGE 137 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 137 (323)
.....+.+.+.|+..... ..+++|+||
T Consensus 195 ~~~Ql~WL~~~L~~a~~~----~~~v~I~~H 221 (296)
T cd00842 195 PAGQLQWLEDELQEAEQA----GEKVWIIGH 221 (296)
T ss_pred HHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 456677788888777654 447889988
No 361
>PLN02840 tRNA dimethylallyltransferase
Probab=34.68 E-value=2.7e+02 Score=23.91 Aligned_cols=31 Identities=3% Similarity=-0.091 Sum_probs=22.7
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEec
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
.++..++.++....++.+.... ...+|+|-+
T Consensus 89 ~ySv~~F~~~A~~~I~~i~~rg----kiPIvVGGT 119 (421)
T PLN02840 89 DYSVGAFFDDARRATQDILNRG----RVPIVAGGT 119 (421)
T ss_pred ceeHHHHHHHHHHHHHHHHhcC----CCEEEEcCc
Confidence 3578889999999999987763 344666654
No 362
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=34.67 E-value=2e+02 Score=21.68 Aligned_cols=33 Identities=33% Similarity=0.245 Sum_probs=23.9
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+..+-|.+. . .-+.++..|+++|++|++.|+.
T Consensus 15 k~~~vtGg~s--G-IGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGGSS--G-IGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecCCc--h-HHHHHHHHHHhcCcEEEEeecc
Confidence 3444555442 3 5567889999999999999876
No 363
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=34.44 E-value=2.9e+02 Score=23.47 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=46.0
Q ss_pred eEEEEecCCCC---CccccHHHHHHHHhhCCcEEEEecCCCC--cCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 56 ATVYMTHGYGS---DTGWMFQKICISFATWGYAVFAADLLGH--GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 56 ~~vv~~HG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
.++|+++-... .+. ....-...|.+.|+.|+-+..--+ |... .....+.++.+..+...+..-+ ...+.
T Consensus 113 ~plviaPamn~~m~~~p-~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~---~~~~~ 186 (390)
T TIGR00521 113 APIILAPAMNENMYNNP-AVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKE---DLEGK 186 (390)
T ss_pred CCEEEEeCCChhhcCCH-HHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhcc---ccCCc
Confidence 45666665321 122 335556678788888776652211 2222 1112366666666665553311 11245
Q ss_pred CeEEEEe------------------chhHHHHHHHhhh
Q 020633 131 PGFLFGE------------------SMGGAATMLMYFQ 150 (323)
Q Consensus 131 ~~~l~G~------------------S~Gg~~a~~~a~~ 150 (323)
++.+.|- .+|..+|..++.+
T Consensus 187 ~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 187 RVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR 224 (390)
T ss_pred eEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC
Confidence 6777766 3566676666554
No 364
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=34.42 E-value=42 Score=29.60 Aligned_cols=23 Identities=26% Similarity=0.138 Sum_probs=18.6
Q ss_pred CCCeEEEEechhHHHHHHHhhhc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
-.+-.++|||+|=+.|+..|.-.
T Consensus 264 I~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 264 IKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCEEeecCHHHHHHHHHhCCC
Confidence 33679999999999998877654
No 365
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=34.09 E-value=1.8e+02 Score=23.36 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=30.1
Q ss_pred hcHHHHHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcC
Q 020633 112 ASSLSFFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.+-|++.+...++ .+.++.++|-|-|=.+|.+.++.+.
T Consensus 22 ~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 22 ANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 3455566666666543 2568999999999999998888754
No 366
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=33.99 E-value=43 Score=17.91 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=22.3
Q ss_pred hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 81 TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 81 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
..+|.+.++|+||.-.. ..+.++..+.+..++..
T Consensus 11 ~~~y~~~~pdlpg~~t~------G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQ------GDTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCEEE------ESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhc------CCCHHHHHHHHHHHHHH
Confidence 34789999999976411 12667766666666543
No 367
>PRK14974 cell division protein FtsY; Provisional
Probab=33.98 E-value=2.7e+02 Score=23.03 Aligned_cols=67 Identities=12% Similarity=0.146 Sum_probs=36.9
Q ss_pred hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-CceeEE
Q 020633 81 TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-NTWTGL 159 (323)
Q Consensus 81 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~ 159 (323)
..|+.++.+|-.|.... -..+.+.+..+.+.+. +..++++.-+.-|.-+...+..+.. ..+.++
T Consensus 220 ~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~------pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTK------PDLVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred hCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhC------CceEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 35788888888765432 1333455555544433 2355667666666655555544321 226777
Q ss_pred EEc
Q 020633 160 IFS 162 (323)
Q Consensus 160 vl~ 162 (323)
|+.
T Consensus 285 IlT 287 (336)
T PRK14974 285 ILT 287 (336)
T ss_pred EEe
Confidence 763
No 368
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=33.95 E-value=73 Score=27.83 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=32.0
Q ss_pred cceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCC
Q 020633 54 VKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G 93 (323)
..++||++.|+-+.. +.....+...|..+|+.|+++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 378999999996553 3367788899999999999998773
No 369
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.94 E-value=2e+02 Score=24.73 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=45.1
Q ss_pred HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-c
Q 020633 77 ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-T 155 (323)
Q Consensus 77 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~ 155 (323)
+.+.+.+|.|+.+|--|.=. --+++.+.+.++-+.+. +..+.+|--++=|.-|...|..+.+. .
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~~------P~E~llVvDam~GQdA~~~A~aF~e~l~ 240 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVIN------PDETLLVVDAMIGQDAVNTAKAFNEALG 240 (451)
T ss_pred HHHHHcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhcC------CCeEEEEEecccchHHHHHHHHHhhhcC
Confidence 34444567777777654311 12444455555544444 55899999999999999988876543 3
Q ss_pred eeEEEEc
Q 020633 156 WTGLIFS 162 (323)
Q Consensus 156 v~~~vl~ 162 (323)
+.++|+.
T Consensus 241 itGvIlT 247 (451)
T COG0541 241 ITGVILT 247 (451)
T ss_pred CceEEEE
Confidence 7888874
No 370
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=33.89 E-value=1.3e+02 Score=24.90 Aligned_cols=61 Identities=11% Similarity=-0.005 Sum_probs=34.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
..+|+.+-|+-.+ + -.+..|.++||.|+.+-+..+....... ...++...|+..+.+.|++
T Consensus 4 ~kV~v~mSGGVDS-S----VaA~lLk~QGyeViGl~m~~~~~~~~~~---C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDS-S----VAAYLLKEQGYEVIGLFMKNWDEDGGGG---CCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHH-H----HHHHHHHHcCCeEEEEEEEeeccCCCCc---CCchhHHHHHHHHHHHhCC
Confidence 4566666665432 2 1244567789999999988776421111 1233344556666665554
No 371
>PHA02114 hypothetical protein
Probab=33.85 E-value=79 Score=20.19 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=25.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEe
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA 89 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~ 89 (323)
..+||+=-.+..+.. .|-.++..|.+.||.|++-
T Consensus 82 ~gtivldvn~amsr~-pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 82 YGTIVLDVNYAMSRA-PWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred cCeEEEEehhhhccC-cHHHHHHHHHhcCceeeeh
Confidence 346666666666666 7888888888889998874
No 372
>PRK06523 short chain dehydrogenase; Provisional
Probab=33.84 E-value=1.5e+02 Score=22.99 Aligned_cols=32 Identities=9% Similarity=-0.038 Sum_probs=22.5
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+++.|..+. .-..+++.|+++|++|+..+..
T Consensus 11 ~vlItGas~g---IG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKG---IGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCc---hhHHHHHHHHHCCCEEEEEeCC
Confidence 4555665433 3457788899999999998754
No 373
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=33.57 E-value=42 Score=22.90 Aligned_cols=34 Identities=18% Similarity=0.075 Sum_probs=23.0
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
+|...|.+|+-. -+-.+++.|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~-P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVY-PFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHH-HHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHH-HHHHHHHHHhccCCeEEEeecc
Confidence 455566666655 6677899999999999755443
No 374
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=33.48 E-value=1.5e+02 Score=21.49 Aligned_cols=31 Identities=13% Similarity=0.261 Sum_probs=19.1
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
|++-|.|.+.. .-..+...|..-|..+..++
T Consensus 36 I~i~G~G~S~~-~A~~~~~~l~~~g~~~~~~~ 66 (179)
T cd05005 36 IFVYGAGRSGL-VAKAFAMRLMHLGLNVYVVG 66 (179)
T ss_pred EEEEecChhHH-HHHHHHHHHHhCCCeEEEeC
Confidence 55566665543 44556666766677777764
No 375
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=33.46 E-value=67 Score=24.73 Aligned_cols=21 Identities=24% Similarity=0.037 Sum_probs=18.2
Q ss_pred eEEEEechhHHHHHHHhhhcC
Q 020633 132 GFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p 152 (323)
-.++|-|.|+.++..++...+
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCC
Confidence 479999999999999988744
No 376
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=33.12 E-value=59 Score=21.50 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=22.3
Q ss_pred EEEecCCCCCccccHHHHHHHHhhC-CcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATW-GYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 91 (323)
||+|.|.+++.. ..+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 578888876643 2456666665 899999987
No 377
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=33.11 E-value=1.5e+02 Score=20.92 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=39.0
Q ss_pred HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.++|.++||.|+ |+ |. .+.... .++.+++..+...+.. ... ..-|.+.|...|-.++ |.+.+
T Consensus 16 ~~l~~~L~~~g~eV~--D~-G~--~~~~~~--~dYpd~a~~va~~V~~---~~~--~~GIliCGtGiG~sia---ANK~~ 80 (148)
T TIGR02133 16 EALWLDLAAHEPEVC--DV-GV--YDADDD--DDYPCFCIAAAEAVAR---DAA--DLGIVIGGSGNGEAIA---ANKVK 80 (148)
T ss_pred HHHHHHHHHCCCEEE--EC-CC--CCCCCC--CCchHHHHHHHHHHhc---CCC--ceEEEEcCCChhheee---ecccC
Confidence 457788888999885 43 21 111101 2455555555555422 210 1235566666665443 55666
Q ss_pred CCceeEEEEccC
Q 020633 153 PNTWTGLIFSAP 164 (323)
Q Consensus 153 ~~~v~~~vl~~~ 164 (323)
. |++.++.++
T Consensus 81 G--iRAA~~~d~ 90 (148)
T TIGR02133 81 G--ARAALAWDT 90 (148)
T ss_pred C--eEEEEECCH
Confidence 5 666666553
No 378
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=32.98 E-value=66 Score=27.25 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=33.5
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEE--EecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK--IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..|++++.|.-|.+-. +....+.+.+...+.-.. .+||.|+...+.-. +..+.+.+.+++||...
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcC
Confidence 6799999999997642 333333333322334444 45788876432212 22456888999999764
No 379
>PRK13690 hypothetical protein; Provisional
Probab=32.74 E-value=1e+02 Score=22.45 Aligned_cols=33 Identities=12% Similarity=0.251 Sum_probs=23.1
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEech
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESM 139 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~ 139 (323)
++++.+++..+++.+..........+.++|-|-
T Consensus 3 ~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 3 LEEIKKQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 455566666666666665555577999999994
No 380
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=32.36 E-value=1.2e+02 Score=21.12 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=22.4
Q ss_pred EecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 60 MTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 60 ~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
-+=|...+....-..+.++|.++||+|+-++..
T Consensus 20 AvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 20 AVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred EEEecCCCCCccHHHHHHHHHHCCCEEEeeCcc
Confidence 334555444323446788999999999998853
No 381
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=31.80 E-value=52 Score=23.85 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=16.6
Q ss_pred CeEEEEechhHHHHHHHhhhc
Q 020633 131 PGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
--.+.|-|.||.+|+.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 457999999999998877763
No 382
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.49 E-value=75 Score=27.00 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=19.6
Q ss_pred CeEEEEechhHHHHHHHhhhcCCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
+-++.|-|.|+.+|..++...++.
T Consensus 96 p~iI~GtSAGAivaalla~~t~~e 119 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEE 119 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHH
Confidence 457999999999999999865443
No 383
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=31.48 E-value=85 Score=27.81 Aligned_cols=80 Identities=20% Similarity=0.141 Sum_probs=42.5
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCc-------EEEEecCCCCcCCCCCcccCCChHHH-----------hhcHHHHHH
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGY-------AVFAADLLGHGRSDGIRCYLGDMEKV-----------AASSLSFFK 119 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~-----------~~d~~~~l~ 119 (323)
-|++-|.|...--.-+.+...+...|. +++.+|..|-=..+........-..+ ..++.++++
T Consensus 299 riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~ 378 (559)
T PTZ00317 299 RIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVR 378 (559)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHh
Confidence 344555554322144555666666777 89999998852222110000000111 235666665
Q ss_pred HHHhcCCCCCCCeEEEEech-hHHHHH
Q 020633 120 HVRDSEPYRDLPGFLFGESM-GGAATM 145 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~-Gg~~a~ 145 (323)
.++ +-+++|-|- ||.+.-
T Consensus 379 ~~K--------PtvLIG~S~~~g~Ft~ 397 (559)
T PTZ00317 379 FVK--------PTALLGLSGVGGVFTE 397 (559)
T ss_pred ccC--------CCEEEEecCCCCCCCH
Confidence 554 679999996 675443
No 384
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=31.47 E-value=72 Score=21.35 Aligned_cols=31 Identities=6% Similarity=0.089 Sum_probs=23.0
Q ss_pred CeEEEE-echhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 131 PGFLFG-ESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 131 ~~~l~G-~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
|+.|+| ..+.|...+.+...+|. +.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~--~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD--FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST--EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC--ccEEEeee
Confidence 478999 88888888888888887 55444443
No 385
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=31.47 E-value=1.9e+02 Score=20.52 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=46.8
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
|.|.++-|..++.. ..+.....|.+-| +.+|.+=. +.....+.+.++++.+..+ ..++++.
T Consensus 1 p~V~Ii~gs~SD~~-~~~~a~~~L~~~g---i~~~~~V~-----------saHR~p~~l~~~~~~~~~~----~~~viIa 61 (150)
T PF00731_consen 1 PKVAIIMGSTSDLP-IAEEAAKTLEEFG---IPYEVRVA-----------SAHRTPERLLEFVKEYEAR----GADVIIA 61 (150)
T ss_dssp -EEEEEESSGGGHH-HHHHHHHHHHHTT----EEEEEE-------------TTTSHHHHHHHHHHTTTT----TESEEEE
T ss_pred CeEEEEeCCHHHHH-HHHHHHHHHHHcC---CCEEEEEE-----------eccCCHHHHHHHHHHhccC----CCEEEEE
Confidence 45677777766655 6677777777666 33343211 1222234466666666543 3368888
Q ss_pred EechhHHHHHHHhhhcCCCceeEE
Q 020633 136 GESMGGAATMLMYFQSEPNTWTGL 159 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~ 159 (323)
+-.+-+.+.-.++..-+.. |-++
T Consensus 62 ~AG~~a~Lpgvva~~t~~P-VIgv 84 (150)
T PF00731_consen 62 VAGMSAALPGVVASLTTLP-VIGV 84 (150)
T ss_dssp EEESS--HHHHHHHHSSS--EEEE
T ss_pred ECCCcccchhhheeccCCC-EEEe
Confidence 8888888887777775444 5444
No 386
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.27 E-value=69 Score=25.82 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=28.1
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEec--hhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGES--MGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 150 (323)
...+.+++++...+. .+.++.++|.| ||-.++.++...
T Consensus 143 p~aii~lL~~~~i~l--~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDL--TGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCC--CCCEEEEECCCCccHHHHHHHHHHC
Confidence 345666777665543 37789999997 999999988765
No 387
>COG4213 XylF ABC-type xylose transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=30.85 E-value=3e+02 Score=22.50 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=44.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh---hcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA---ASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~---~d~~~~l~~l~~~~~~~~~~ 131 (323)
++-+|++....+ . ......+...+.|..|+++|..=+- ....+..+++... -....++..+..+...+...
T Consensus 81 g~~vlvi~a~d~--~-~l~~~i~~A~~~gikViaYDRlI~n---~dvd~YvsFDN~~VG~lQa~~l~~~lk~k~~~~~gn 154 (341)
T COG4213 81 GVKVLVIGAIDG--G-VLSNAVEKAKSEGIKVIAYDRLINN---ADVDFYVSFDNEKVGELQAKALVKGLKLKPLTSEGN 154 (341)
T ss_pred CCCEEEEEeccc--h-hHHHHHHHHHHcCCeEEEeeccccc---CCccEEEEecchhHHHHHHHHHHHHhccCCCCCCCC
Confidence 455666655543 2 4456666677789999999977443 1111111333322 23345666676665333557
Q ss_pred eEEEEec
Q 020633 132 GFLFGES 138 (323)
Q Consensus 132 ~~l~G~S 138 (323)
+.++|-|
T Consensus 155 ~~l~~GS 161 (341)
T COG4213 155 YVLLGGS 161 (341)
T ss_pred EEEecCC
Confidence 8888887
No 388
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=30.85 E-value=1.1e+02 Score=20.59 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=19.0
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
|++-|.|.+.. ....+...|...|..+...+
T Consensus 3 I~i~G~G~S~~-~a~~~~~~l~~~g~~~~~~~ 33 (128)
T cd05014 3 VVVTGVGKSGH-IARKIAATLSSTGTPAFFLH 33 (128)
T ss_pred EEEEeCcHhHH-HHHHHHHHhhcCCCceEEcc
Confidence 56667765543 44556666666677777663
No 389
>PRK00889 adenylylsulfate kinase; Provisional
Probab=30.82 E-value=1.1e+02 Score=22.15 Aligned_cols=37 Identities=14% Similarity=0.120 Sum_probs=24.8
Q ss_pred ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecC
Q 020633 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 55 ~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
++.+|.+.|..++. ...-..++..|...|..++.+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 45688888987764 32445567777667777877754
No 390
>PRK11460 putative hydrolase; Provisional
Probab=30.67 E-value=2e+02 Score=22.09 Aligned_cols=43 Identities=14% Similarity=-0.001 Sum_probs=26.3
Q ss_pred cceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 54 VKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
..++|+++||-....- .....+.+.|.+.|..+-..-++|.|.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH 191 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGH 191 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCC
Confidence 3578999999875421 133456677777777665555554443
No 391
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=30.13 E-value=76 Score=27.51 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=32.0
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcC----CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKAS----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+++...|-.|..+++-..+...+.++ ..+..+..+-.+||++.+++|+. ....+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~----~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPES----SLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHH----HHHHHHHHHh
Confidence 3445555555565555544433333332 12233333344799999899987 4444444443
No 392
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=30.09 E-value=89 Score=22.80 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=17.5
Q ss_pred cHHHHHHHHhhCCcEEEEecCC
Q 020633 71 MFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.-..++..|+.+|++|+.+|.=
T Consensus 15 ~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 15 IAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp HHHHHHHHHHHTTS-EEEEEES
T ss_pred HHHHHHhccccccccccccccC
Confidence 4456888999999999999983
No 393
>PRK13529 malate dehydrogenase; Provisional
Probab=29.46 E-value=88 Score=27.76 Aligned_cols=80 Identities=25% Similarity=0.208 Sum_probs=43.3
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCc-------EEEEecCCCCcCCCCCcccCCChHHH---------------hhcH
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGY-------AVFAADLLGHGRSDGIRCYLGDMEKV---------------AASS 114 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~---------------~~d~ 114 (323)
.-|++.|.|...--.-+.+...+...|. +++.+|..|.=..+... ....-..+ ..++
T Consensus 296 ~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~-l~~~k~~fa~~~~~~~~~~~~~~~~~L 374 (563)
T PRK13529 296 QRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPD-LLDFQKPYARKREELADWDTEGDVISL 374 (563)
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc-chHHHHHHhhhcccccccccccCCCCH
Confidence 3455566664332144556666666677 89999999852222110 00000111 1345
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEech-hHHHHH
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESM-GGAATM 145 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~-Gg~~a~ 145 (323)
.++++.++ +-+++|-|- ||.+.-
T Consensus 375 ~e~v~~~k--------PtvLIG~S~~~g~Ft~ 398 (563)
T PRK13529 375 LEVVRNVK--------PTVLIGVSGQPGAFTE 398 (563)
T ss_pred HHHHhccC--------CCEEEEecCCCCCCCH
Confidence 56665544 569999998 665543
No 394
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=29.45 E-value=2.2e+02 Score=20.59 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=37.7
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc-----cccHHHHHHHHhhCCcEEEEec
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-----GWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~-----~~~~~~~~~~l~~~g~~v~~~d 90 (323)
...+..+...|| .|....+... +++|+|+-.-.... ...|+.-.+.|.+.|+.|+.+.
T Consensus 68 ~iPD~tL~dedg~sisLkkit~n----k~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 68 AIPDFTLKDEDGKSISLKKITGN----KPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred cCCCcccccCCCCeeeeeeecCC----CcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeec
Confidence 334566777788 8887777654 47888876554332 1245555667777789998764
No 395
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=29.40 E-value=1.5e+02 Score=24.06 Aligned_cols=64 Identities=14% Similarity=-0.033 Sum_probs=36.2
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
...+||.+-|+-. +. --+..|+++||.|..+=++.. .+..........+.-..|+..+.++|.+
T Consensus 5 ~~~VvvamSgGVD-Ss----Vaa~Ll~~~g~~v~gv~M~nW-d~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 5 PDRVVVAMSGGVD-SS----VAARLLAARGYNVTGVFMKNW-DSLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred cceEEEEecCCch-HH----HHHHHHHhcCCCeeEEeeecc-ccccccccCCCchhhHHHHHHHHHHhCC
Confidence 3557777776543 22 124557788999999888876 2222222122344445566666666554
No 396
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.32 E-value=71 Score=26.89 Aligned_cols=23 Identities=17% Similarity=0.390 Sum_probs=18.8
Q ss_pred CeEEEEechhHHHHHHHhhhcCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
+-++.|-|.|+.+|..+|...++
T Consensus 112 p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 112 PRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred CceEEEecHHHHHHHHHHcCCHH
Confidence 45799999999999999985443
No 397
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=29.12 E-value=84 Score=24.62 Aligned_cols=84 Identities=24% Similarity=0.158 Sum_probs=44.3
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCc-------EEEEecCCCCcCCCCCccc--------CCChHHHhhcHHHHHHHHH
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGY-------AVFAADLLGHGRSDGIRCY--------LGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~--------~~~~~~~~~d~~~~l~~l~ 122 (323)
-|++.|.|...--.-+.+...+..+|. +++.+|..|.=..+...-. .........++.++++.++
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~eav~~~k 106 (255)
T PF03949_consen 27 RIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWGSLLEAVKGAK 106 (255)
T ss_dssp EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--SSHHHHHHCH-
T ss_pred EEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccccCHHHHHHhcC
Confidence 345556654322145566666666676 6999999886222211000 0000001147777777765
Q ss_pred hcCCCCCCCeEEEEec-hhHHHHHHHhh
Q 020633 123 DSEPYRDLPGFLFGES-MGGAATMLMYF 149 (323)
Q Consensus 123 ~~~~~~~~~~~l~G~S-~Gg~~a~~~a~ 149 (323)
+-+|+|-| .||.+.-.+..
T Consensus 107 --------PtvLIG~S~~~g~ft~evv~ 126 (255)
T PF03949_consen 107 --------PTVLIGLSGQGGAFTEEVVR 126 (255)
T ss_dssp ---------SEEEECSSSTTSS-HHHHH
T ss_pred --------CCEEEEecCCCCcCCHHHHH
Confidence 56999999 88876554443
No 398
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.76 E-value=98 Score=24.95 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=18.6
Q ss_pred CeEEEEechhHHHHHHHhhhcCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
+-++.|.|.|+.+|..++....+
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCCcH
Confidence 45799999999999998876443
No 399
>PRK15482 transcriptional regulator MurR; Provisional
Probab=28.73 E-value=73 Score=25.39 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=20.1
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
|++.|.|.+.. .-..+...|..-|+.|....
T Consensus 138 I~i~G~G~S~~-~A~~l~~~l~~~g~~~~~~~ 168 (285)
T PRK15482 138 IQITGLGGSAL-VGRDLSFKLMKIGYRVACEA 168 (285)
T ss_pred eEEEEeChhHH-HHHHHHHHHHhCCCeeEEec
Confidence 67777775543 44555666666788877753
No 400
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=28.65 E-value=2.1e+02 Score=22.97 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=21.6
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEec
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
++..++..+....++.+... +...+|+|-|
T Consensus 68 ~~v~~f~~~a~~~i~~~~~~----g~~pi~vGGT 97 (287)
T TIGR00174 68 YSAADFQTLALNAIADITAR----GKIPLLVGGT 97 (287)
T ss_pred EcHHHHHHHHHHHHHHHHhC----CCCEEEEcCc
Confidence 46677888888888888765 3346777755
No 401
>PRK09072 short chain dehydrogenase; Provisional
Probab=28.37 E-value=1e+02 Score=24.00 Aligned_cols=32 Identities=13% Similarity=0.080 Sum_probs=22.9
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+++.|..+. .-..+++.|+++|+.|+.++..
T Consensus 7 ~vlItG~s~~---iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGG---IGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCEEEEEECC
Confidence 3566665543 4457888899999999998753
No 402
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.32 E-value=1.3e+02 Score=23.02 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=24.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+..|++-|-.. .+ .-..++..|++.||.|++--.+
T Consensus 6 ~~k~VlItgcs~-GG-IG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSS-GG-IGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCC-cc-hhHHHHHHHHhCCeEEEEEccc
Confidence 455666666432 22 4457889999999999997654
No 403
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=28.30 E-value=1e+02 Score=25.13 Aligned_cols=20 Identities=20% Similarity=0.423 Sum_probs=17.0
Q ss_pred CeEEEEechhHHHHHHHhhh
Q 020633 131 PGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+-++.|-|.|+.+|..++..
T Consensus 97 p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 45799999999999988764
No 404
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=28.30 E-value=1.2e+02 Score=18.59 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=16.7
Q ss_pred cHHHHHHHHhhCCcEEEEec
Q 020633 71 MFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d 90 (323)
.-..++..|++.|++|+.+|
T Consensus 15 ~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 15 LAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHCCCeEEEEC
Confidence 45677888888899999999
No 405
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=28.03 E-value=2.2e+02 Score=24.51 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=40.1
Q ss_pred HHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-Cce
Q 020633 78 SFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-NTW 156 (323)
Q Consensus 78 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v 156 (323)
.+...+|.++.+|-+|.-. .-+.+.+.+..+.+... +..++++--++-|.-+...+..+.+ ..+
T Consensus 177 ~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~------p~e~lLVlda~~Gq~a~~~a~~F~~~~~~ 241 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQ------PDNIIFVMDGSIGQAAEAQAKAFKDSVDV 241 (429)
T ss_pred HHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcC------CcEEEEEeccccChhHHHHHHHHHhccCC
Confidence 3444579999999997532 12334444555443332 3357777777766666655555432 127
Q ss_pred eEEEE
Q 020633 157 TGLIF 161 (323)
Q Consensus 157 ~~~vl 161 (323)
.++|+
T Consensus 242 ~g~Il 246 (429)
T TIGR01425 242 GSVII 246 (429)
T ss_pred cEEEE
Confidence 77777
No 406
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.00 E-value=55 Score=26.15 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=16.9
Q ss_pred EEEEechhHHHHHHHhhhc
Q 020633 133 FLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~ 151 (323)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7999999999999998754
No 407
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=27.80 E-value=49 Score=26.76 Aligned_cols=17 Identities=24% Similarity=0.501 Sum_probs=15.4
Q ss_pred EEEEechhHHHHHHHhh
Q 020633 133 FLFGESMGGAATMLMYF 149 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~ 149 (323)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 68999999999999876
No 408
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=27.79 E-value=3.3e+02 Score=23.45 Aligned_cols=75 Identities=9% Similarity=-0.018 Sum_probs=42.7
Q ss_pred eEEEEecCCCCC--ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC-CCCCCCe
Q 020633 56 ATVYMTHGYGSD--TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE-PYRDLPG 132 (323)
Q Consensus 56 ~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~~ 132 (323)
|-+|++-..+.. .......+++.+.+.|..|+.++.+|+..+.. ..+-.-+.++++++.... ......|
T Consensus 87 p~~I~V~ttC~~~~IGdDi~~v~~~~~~~~~~vi~v~t~gf~g~~~--------~G~~~a~~al~~~~~~~~~~~~~~~V 158 (427)
T cd01971 87 ADLFVVLTGCIAEIIGDDVGAVVSEFQEGGAPIVYLETGGFKGNNY--------AGHEIVLKAIIDQYVGQSEEKEPGLV 158 (427)
T ss_pred CCEEEEEcCCcHHHhhcCHHHHHHHhhhcCCCEEEEECCCcCcccc--------cHHHHHHHHHHHHhccCCCCCCCCeE
Confidence 445555544422 22366777777755588999999999865421 222233445555443321 1124568
Q ss_pred EEEEec
Q 020633 133 FLFGES 138 (323)
Q Consensus 133 ~l~G~S 138 (323)
.|+|.+
T Consensus 159 NiiG~~ 164 (427)
T cd01971 159 NLWGPV 164 (427)
T ss_pred EEEecc
Confidence 899964
No 409
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=27.76 E-value=1.5e+02 Score=18.70 Aligned_cols=29 Identities=24% Similarity=0.172 Sum_probs=17.8
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVF 87 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~ 87 (323)
.+++||+++.... -...+..|.+.||.+.
T Consensus 61 ~~~ivv~C~~G~r-----s~~aa~~L~~~G~~~~ 89 (100)
T cd01523 61 DQEVTVICAKEGS-----SQFVAELLAERGYDVD 89 (100)
T ss_pred CCeEEEEcCCCCc-----HHHHHHHHHHcCceeE
Confidence 3567777764431 2245667778899843
No 410
>PRK01254 hypothetical protein; Provisional
Probab=27.65 E-value=2.1e+02 Score=26.35 Aligned_cols=37 Identities=11% Similarity=0.105 Sum_probs=24.7
Q ss_pred EEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCCC
Q 020633 57 TVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 57 ~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G 93 (323)
=||++-|=. .+.++...-+.+.|..+||+|-.+.+|.
T Consensus 41 DiilVtGDAYVDHPsFG~AiigR~Le~~G~rVgIiaQPd 79 (707)
T PRK01254 41 DIIIVTGDAYVDHPSFGMAIIGRMLEAQGFRVGIIAQPD 79 (707)
T ss_pred CEEEEeCcccccCccchHHHHHHHHHHcCCeEEEEeCCC
Confidence 456666643 2334344556778888899999988773
No 411
>PRK06849 hypothetical protein; Provisional
Probab=27.40 E-value=1.5e+02 Score=25.02 Aligned_cols=22 Identities=27% Similarity=0.235 Sum_probs=18.4
Q ss_pred HHHHHHHhhCCcEEEEecCCCC
Q 020633 73 QKICISFATWGYAVFAADLLGH 94 (323)
Q Consensus 73 ~~~~~~l~~~g~~v~~~d~~G~ 94 (323)
..+++.|.+.|++|++.|....
T Consensus 18 l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 18 LELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred HHHHHHHHHCCCEEEEEeCCch
Confidence 4678899999999999998754
No 412
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=27.29 E-value=62 Score=19.38 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=18.0
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEe
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAA 89 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~ 89 (323)
.|.++++||.... .-..++...++ +|+.++.+
T Consensus 31 ~~~~~lvhGga~~---GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPK---GADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCC---CHHHHHHHHHHHCCCeeEEe
Confidence 4678899997621 22344444443 46665543
No 413
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=27.17 E-value=1.9e+02 Score=19.15 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=29.7
Q ss_pred EEecCCCCCcccc-HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 59 YMTHGYGSDTGWM-FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 59 v~~HG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
|++||-.|..... -+.+++.+ |+.++.+|..-...+ ...+....+..+++....
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELISS--------YAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHHTS--------STTHHHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccccc--------cccccccccccccccccc
Confidence 6889987764322 22333333 688888887644311 233344556666665543
No 414
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=27.10 E-value=3e+02 Score=21.26 Aligned_cols=74 Identities=14% Similarity=0.121 Sum_probs=40.0
Q ss_pred HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHH----HHHHhhh
Q 020633 75 ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA----TMLMYFQ 150 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~----a~~~a~~ 150 (323)
.++.|...+..|+.+|+-|-...-. ..+.+..-++|....++.+.... +.-.+=+.+|-+.|+.- |+.+...
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vIk---~vy~l~ksv~dyl~~l~~L~e~~-irvvpHitiGL~~gki~~e~kaIdiL~~ 177 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVIK---RVYKLPKSVEDYLRSLLLLKENG-IRVVPHITIGLDFGKIHGEFKAIDILVN 177 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHHH---HHHcCCccHHHHHHHHHHHHHcC-ceeceeEEEEeccCcccchHHHHHHHhc
Confidence 3456666678899999875322210 01111222344555555554432 11234578999998854 5666665
Q ss_pred cC
Q 020633 151 SE 152 (323)
Q Consensus 151 ~p 152 (323)
++
T Consensus 178 ~~ 179 (275)
T COG1856 178 YE 179 (275)
T ss_pred CC
Confidence 54
No 415
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.09 E-value=4.2e+02 Score=23.03 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=19.4
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM 145 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 145 (323)
.+++...+++|-.. ...|.++.|.|+|++-..
T Consensus 381 f~aVy~yw~qLP~~---sRPKLylhG~SLGa~~s~ 412 (588)
T COG4425 381 FEAVYGYWTQLPKS---SRPKLYLHGESLGAMGSE 412 (588)
T ss_pred HHHHHHHHHhCCcC---CCCceEEeccccccccCc
Confidence 34444444444333 244899999999987543
No 416
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]
Probab=27.03 E-value=2.5e+02 Score=22.82 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=39.0
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE-----EechhHHHHHHHh
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF-----GESMGGAATMLMY 148 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~-----G~S~Gg~~a~~~a 148 (323)
..++.|.++|+.+=.+|+|-. .- -|...+++.+++.. +++++ ..|+|+-++...+
T Consensus 217 ~AAe~l~~~Gis~EVIDLRTl-------------~P--lD~etIi~SvkKTg-----R~viV~Ea~~~~g~gaei~A~i~ 276 (324)
T COG0022 217 EAAEELEKEGISAEVIDLRTL-------------SP--LDKETIIASVKKTG-----RLVIVHEAPKTGGIGAEIAALIA 276 (324)
T ss_pred HHHHHHhhcCCCeEEEecccc-------------Cc--cCHHHHHHHHHhhC-----cEEEEEeccccCChHHHHHHHHH
Confidence 456678888999999999821 11 45566777777643 67766 5567777777666
Q ss_pred hh
Q 020633 149 FQ 150 (323)
Q Consensus 149 ~~ 150 (323)
.+
T Consensus 277 e~ 278 (324)
T COG0022 277 EE 278 (324)
T ss_pred HH
Confidence 54
No 417
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.94 E-value=60 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.312 Sum_probs=16.0
Q ss_pred EEEEechhHHHHHHHhhh
Q 020633 133 FLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999998864
No 418
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=26.87 E-value=90 Score=25.21 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=19.7
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCC
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWG 83 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g 83 (323)
..+|.++-+||+.|+.. +.-+.+++.+-..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 56899999999988754 22233444443333
No 419
>PRK00865 glutamate racemase; Provisional
Probab=26.85 E-value=2.2e+02 Score=22.43 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=34.6
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...+.+.+.+ |+..++.+-+..|++.-+++.+....+...+.+||.+
T Consensus 19 tvl~~i~~~l--p~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 19 TVLREIRRLL--PDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred HHHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 4456777777 7888888888889998777766666666666667664
No 420
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=26.83 E-value=4e+02 Score=22.92 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=40.6
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEec
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
..+.+...+.+...+++.+|---.=.|+.......+..+.-+-..++++..+.. +..++++||=
T Consensus 156 ~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~----~i~~fiVGHV 219 (456)
T COG1066 156 NLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTK----NIAIFIVGHV 219 (456)
T ss_pred CHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHc----CCeEEEEEEE
Confidence 345566677777788999996644344332223336666656666666666665 4578999995
No 421
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=26.82 E-value=3.7e+02 Score=22.26 Aligned_cols=82 Identities=13% Similarity=0.170 Sum_probs=52.3
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.|+.+. +-..+||.|+.+|--|.=. +-..+.+.+..+.+-+....+..+..+.++--+.-|.=++.-|..
T Consensus 210 afDAi~-~Akar~~DvvliDTAGRLh---------nk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~ 279 (340)
T COG0552 210 AFDAIQ-AAKARGIDVVLIDTAGRLH---------NKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI 279 (340)
T ss_pred HHHHHH-HHHHcCCCEEEEeCccccc---------CchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHH
Confidence 444433 3445679999999765422 345566677777766666544334457788788888888877776
Q ss_pred cCCC-ceeEEEEc
Q 020633 151 SEPN-TWTGLIFS 162 (323)
Q Consensus 151 ~p~~-~v~~~vl~ 162 (323)
+.+. .+.++|+.
T Consensus 280 F~eav~l~GiIlT 292 (340)
T COG0552 280 FNEAVGLDGIILT 292 (340)
T ss_pred HHHhcCCceEEEE
Confidence 5432 27788773
No 422
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=26.54 E-value=1.1e+02 Score=24.21 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=27.4
Q ss_pred EEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 57 TVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 57 ~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
+|.+. |=||.. ...-..++..|+++|++|+.+|+=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45555 555442 32456788899999999999998765544
No 423
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=26.42 E-value=1.5e+02 Score=24.72 Aligned_cols=39 Identities=13% Similarity=-0.025 Sum_probs=27.5
Q ss_pred eEEEEe-cCCCCCccccHHHHHHHHhhCCcEEEEecCCCC
Q 020633 56 ATVYMT-HGYGSDTGWMFQKICISFATWGYAVFAADLLGH 94 (323)
Q Consensus 56 ~~vv~~-HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 94 (323)
+.+|++ |++.+.....-++++..|+++|++|+-++-+|.
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~ 44 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGL 44 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCc
Confidence 444444 544333223668899999978899999999886
No 424
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=26.21 E-value=1.2e+02 Score=21.40 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.9
Q ss_pred CeEEEEechhHHHHHHHh
Q 020633 131 PGFLFGESMGGAATMLMY 148 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a 148 (323)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 457899999999999888
No 425
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=26.13 E-value=3.5e+02 Score=21.95 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=20.6
Q ss_pred CeEEEEec----------hhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 131 PGFLFGES----------MGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 131 ~~~l~G~S----------~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
++++..|+ .|+..+..+|.+|.- -++.++|.+...+
T Consensus 233 KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~v----Pv~VlAp~yKLsP 278 (353)
T KOG1465|consen 233 KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSV----PVIVLAPMYKLSP 278 (353)
T ss_pred eEEEEeeeEecCCCeeccchHHHHHHHHHhcCC----cEEEecchhhcCC
Confidence 67766665 356666666665543 3566666655443
No 426
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=26.13 E-value=1.2e+02 Score=25.72 Aligned_cols=25 Identities=28% Similarity=0.313 Sum_probs=20.1
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCc
Q 020633 71 MFQKICISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G 95 (323)
.-..++..|+..|++|+++|+=-.|
T Consensus 138 ta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 138 TSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred HHHHHHHHHHhcCCceEEEcCCCCC
Confidence 4557788899999999999986554
No 427
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=25.92 E-value=2e+02 Score=25.86 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=34.8
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEe------chhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGE------SMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
..-+.++...++.+-.+ .++|+++|| +.|+.+++...+..-.+ .+.+++.|
T Consensus 320 RvRaRvis~al~d~i~e----~d~VfImGHk~pDmDalGsAig~~~~A~~~~~--~a~~v~dp 376 (655)
T COG3887 320 RVRARVISTALSDIIKE----SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK--EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHHHhh----cCcEEEEccCCCChHHHHHHHHHHHHHHhccc--ccEEEECc
Confidence 44556777777766666 458999999 68999998776654432 34555554
No 428
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=25.68 E-value=3.1e+02 Score=20.99 Aligned_cols=62 Identities=16% Similarity=0.284 Sum_probs=34.5
Q ss_pred cccccccCcccceeEE--EcCCC--cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEE
Q 020633 20 EEYYTSQGVRNGKKYF--ETPNG--KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFA 88 (323)
Q Consensus 20 ~~~~~~~~~~~~~~~~--~~~~g--~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~ 88 (323)
.+|+.-.+...++.-+ ....| .+-..... .-+|.+|.+||+... .-..++-.+++. |...++
T Consensus 159 ~ef~~LyG~~t~RalvFT~VstGRSPMVAirV~----~lKP~aVVlHGi~~~---~vD~lAikiAe~e~IpLvv 225 (241)
T COG1709 159 LEFYRLYGWTTERALVFTKVSTGRSPMVAIRVS----PLKPAAVVLHGIPPD---NVDELAIKIAEIERIPLVV 225 (241)
T ss_pred hhHHHHhcCCcceEEEEEeccCCCCceEEEEcc----CCCccEEEEecCCcc---chhHHHHHHHhhcCCceEE
Confidence 4555555555555432 33345 44333332 237999999998754 334667777765 444443
No 429
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.62 E-value=2.6e+02 Score=21.52 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=21.6
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
+++-|..+. .-..+++.|+++|+.|+.++.+
T Consensus 5 vlItG~sg~---iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 5 ALVTGGRRG---IGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred EEEeCCCch---HHHHHHHHHHHCCCEEEEEecC
Confidence 445554332 4457888899999999998855
No 430
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=25.61 E-value=99 Score=20.14 Aligned_cols=50 Identities=12% Similarity=0.222 Sum_probs=27.9
Q ss_pred chhHHHHHHHcCCCCccEEEec-CCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+..+..+.+.+...++++.+.+ +.|++..+-..+...+++...+..|+.+
T Consensus 10 ~r~AqaF~DYl~sqgI~~~i~~~~~~~~~lwl~de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 10 PRAAQAFIDYLASQGIELQIEPEGQGQFALWLHDEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHHHTT--EEEE-SSSE--EEEES-GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCCceEEEEeCHHHHHHHHHHHHHHHHC
Confidence 3445666666654567777774 4564444344556677788888888864
No 431
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=25.61 E-value=2.7e+02 Score=21.27 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=21.8
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCCC
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 93 (323)
+++-|..+. .-..+++.|.++|++|+..+...
T Consensus 11 vlItGas~~---iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 11 VWVTGAAQG---IGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred EEEeCCCch---HHHHHHHHHHHCCCEEEEEecch
Confidence 444454432 34567888889999999998643
No 432
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=25.48 E-value=57 Score=26.87 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=15.3
Q ss_pred eEEEEechhHHHHHHHhhh
Q 020633 132 GFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~ 150 (323)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3689999999988877643
No 433
>PF08497 Radical_SAM_N: Radical SAM N-terminal; InterPro: IPR013704 This domain tends to occur to the N terminus of PF04055 from PFAM radical SAM domain in hypothetical bacterial proteins. Proteins in this entry are radical SAM proteins, they catalyse diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].
Probab=25.36 E-value=3.3e+02 Score=21.96 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=24.8
Q ss_pred eEEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 56 ATVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 56 ~~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.=||++-|=. .+.++.-.-+.+.|.++||+|-.+-+|
T Consensus 17 lDvilVtGDAYVDHPsFG~AiIgR~Le~~GyrVgIiaQP 55 (302)
T PF08497_consen 17 LDVILVTGDAYVDHPSFGAAIIGRVLEAHGYRVGIIAQP 55 (302)
T ss_pred ccEEEEeCcccccCcchhHHHHHHHHHHcCCeEEEEeCC
Confidence 3466666643 233433455677888899999998877
No 434
>PRK04148 hypothetical protein; Provisional
Probab=25.33 E-value=2.3e+02 Score=19.68 Aligned_cols=22 Identities=5% Similarity=-0.227 Sum_probs=17.7
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..++..+|-..|..+|..++..
T Consensus 17 ~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHHC
Confidence 3479999999998888887754
No 435
>PRK12828 short chain dehydrogenase; Provisional
Probab=25.31 E-value=1.3e+02 Score=22.73 Aligned_cols=31 Identities=16% Similarity=-0.026 Sum_probs=22.4
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
.++|.|..+. .-..+++.|.++|+.|+.++.
T Consensus 9 ~vlItGatg~---iG~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGG---LGRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCc---HhHHHHHHHHHCCCeEEEEeC
Confidence 3566666543 345678888889999999985
No 436
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=25.27 E-value=2.8e+02 Score=22.05 Aligned_cols=57 Identities=11% Similarity=0.228 Sum_probs=35.5
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
+.-.+++ |.+|+.......++..+. ++.++-++.. . .++..++-+|+..++...+.+
T Consensus 31 ~Gh~LLv-G~~GsGr~sl~rLaa~i~--~~~~~~i~~~--------~--~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 31 RGHALLV-GVGGSGRQSLARLAAFIC--GYEVFQIEIT--------K--GYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp TEEEEEE-CTTTSCHHHHHHHHHHHT--TEEEE-TTTS--------T--TTHHHHHHHHHHHHHHHHHCS
T ss_pred CCCeEEe-cCCCccHHHHHHHHHHHh--ccceEEEEee--------C--CcCHHHHHHHHHHHHHHHhcc
Confidence 3444444 444444335556666653 5888887742 1 147888899999999888766
No 437
>PRK02399 hypothetical protein; Provisional
Probab=25.24 E-value=1.8e+02 Score=24.73 Aligned_cols=42 Identities=19% Similarity=0.228 Sum_probs=32.4
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
..++|-+-=+|.+.. .-..+.+.|.++||.|++|.--|.|..
T Consensus 185 ~kp~Ig~TmfGvTtp-~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 185 DKPLIGLTMFGVTTP-CVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCceEEEecCCCcHH-HHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 445556665665555 677888899999999999999999864
No 438
>PRK10867 signal recognition particle protein; Provisional
Probab=25.24 E-value=4.5e+02 Score=22.77 Aligned_cols=69 Identities=20% Similarity=0.151 Sum_probs=35.2
Q ss_pred HHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-Cce
Q 020633 78 SFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-NTW 156 (323)
Q Consensus 78 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v 156 (323)
.....+|.++.+|-+|....+ +...+.+..+.+.+. +..++++--++-|.-+...+..+.+ ..+
T Consensus 178 ~a~~~~~DvVIIDTaGrl~~d---------~~lm~eL~~i~~~v~------p~evllVlda~~gq~av~~a~~F~~~~~i 242 (433)
T PRK10867 178 EAKENGYDVVIVDTAGRLHID---------EELMDELKAIKAAVN------PDEILLVVDAMTGQDAVNTAKAFNEALGL 242 (433)
T ss_pred HHHhcCCCEEEEeCCCCcccC---------HHHHHHHHHHHHhhC------CCeEEEEEecccHHHHHHHHHHHHhhCCC
Confidence 334457999999998864321 223333444433332 2245555555544545555544321 125
Q ss_pred eEEEE
Q 020633 157 TGLIF 161 (323)
Q Consensus 157 ~~~vl 161 (323)
.++|+
T Consensus 243 ~giIl 247 (433)
T PRK10867 243 TGVIL 247 (433)
T ss_pred CEEEE
Confidence 66666
No 439
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=25.07 E-value=1.9e+02 Score=23.71 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=20.6
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
.-..+++.|.++|++|..+ .||||...
T Consensus 67 ~v~~L~~~l~~~g~~~~il-sRGYg~~~ 93 (325)
T PRK00652 67 VVIALAEQLQARGLKPGVV-SRGYGGKL 93 (325)
T ss_pred HHHHHHHHHHHCCCeEEEE-CCCCCCCc
Confidence 5567788888899987766 48998754
No 440
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=24.97 E-value=38 Score=24.70 Aligned_cols=36 Identities=3% Similarity=0.003 Sum_probs=28.2
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+-+.+..++++.+.. -.-.+|-|||+.+|+.++...
T Consensus 83 Yw~El~~i~dwa~~~------v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 83 YWEELTEILDWAKTH------VTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred hHHHHHHHHHHHHHh------CcchHHHHHHHHHHHHHHcCc
Confidence 445688889988854 356889999999999887653
No 441
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=24.95 E-value=2.7e+02 Score=20.03 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=38.4
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.-++++..--|.-.+.+.++++.+.+ .+.++.+|--+|.... .++...+.+.+..++.+
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l--~~KkV~lF~T~G~~~~----s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKL--KGKKVALFGTAGAGPD----SEYAKKILKNVEALLPK 98 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHc--cCCeEEEEEecCCCCc----hHHHHHHHHHHHHhhcc
Confidence 345677777777777777777887777 4566666665555444 44555566666666543
No 442
>PRK07053 glutamine amidotransferase; Provisional
Probab=24.92 E-value=3.3e+02 Score=21.06 Aligned_cols=83 Identities=18% Similarity=0.131 Sum_probs=44.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC--------C-----CCcccCCC--hHHHhhcHHHHHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS--------D-----GIRCYLGD--MEKVAASSLSFFK 119 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s--------~-----~~~~~~~~--~~~~~~d~~~~l~ 119 (323)
++.+|+-|--..+.. .+.+.|.+.|+.+-.++.. .+.. + +.+...++ ...+..+..++++
T Consensus 3 ~~ilviqh~~~e~~g----~i~~~L~~~g~~~~v~~~~-~~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~ 77 (234)
T PRK07053 3 KTAVAIRHVAFEDLG----SFEQVLGARGYRVRYVDVG-VDDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLR 77 (234)
T ss_pred ceEEEEECCCCCCCh----HHHHHHHHCCCeEEEEecC-CCccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHH
Confidence 357778887665544 3566676777766555331 1110 0 10001111 1123445556666
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHh
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMY 148 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
.+... .+-++|.|+|..+...+.
T Consensus 78 ~~~~~------~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 78 QRLAA------GLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHC------CCCEEEECccHHHHHHHc
Confidence 55433 356999999998876655
No 443
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=24.73 E-value=1.1e+02 Score=24.78 Aligned_cols=34 Identities=3% Similarity=-0.064 Sum_probs=26.1
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+..++++++.. ..-++|-|+|+.+++.+..-
T Consensus 121 W~El~~i~~w~~~~------~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTH------VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHc------CCCEEEEcHHHHHHHHHcCC
Confidence 44578888888754 46799999999998876654
No 444
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=24.70 E-value=1.5e+02 Score=23.11 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=27.0
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.-|+++-|..+ + .-...++.|++.|+.|+....|
T Consensus 6 ~kv~lITGASS--G-iG~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 6 GKVALITGASS--G-IGEATARALAEAGAKVVLAARR 39 (246)
T ss_pred CcEEEEecCcc--h-HHHHHHHHHHHCCCeEEEEecc
Confidence 36788888754 3 5567899999999999998866
No 445
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=24.61 E-value=1.6e+02 Score=24.02 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=27.4
Q ss_pred eEEEEecCCC--CC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 56 ATVYMTHGYG--SD-TGWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 56 ~~vv~~HG~~--~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
-+||.+-.+. |+ ....-..+++.|.++|+++..+- ||||...
T Consensus 28 vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~ 72 (311)
T TIGR00682 28 VPVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKT 72 (311)
T ss_pred CCEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCC
Confidence 3566665432 22 22255667888889999987765 7998764
No 446
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=24.56 E-value=1.3e+02 Score=18.87 Aligned_cols=28 Identities=7% Similarity=0.025 Sum_probs=16.2
Q ss_pred eeEEEcCCC--cEEEEEecCCCCCcceEEEEecCCC
Q 020633 32 KKYFETPNG--KLFTQSFLPLDQKVKATVYMTHGYG 65 (323)
Q Consensus 32 ~~~~~~~~g--~l~~~~~~~~~~~~~~~vv~~HG~~ 65 (323)
+..+....+ ++.|..... ..||++||+.
T Consensus 43 ElR~~~~~~~~Ri~y~~~~~------~~ivll~~f~ 72 (91)
T PF05973_consen 43 ELRVRGGSNIYRILYFFDGG------DIIVLLHGFI 72 (91)
T ss_pred EEEEeecCCcceEEEEEcCc------cEEEEEEEEE
Confidence 334444443 665554332 3899999985
No 447
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=24.52 E-value=86 Score=19.37 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=16.0
Q ss_pred HHHHHHHHhhCCcEEEEec
Q 020633 72 FQKICISFATWGYAVFAAD 90 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d 90 (323)
...+.++|.++||.|+-++
T Consensus 10 Ls~v~~~L~~~GyeVv~l~ 28 (80)
T PF03698_consen 10 LSNVKEALREKGYEVVDLE 28 (80)
T ss_pred chHHHHHHHHCCCEEEecC
Confidence 4567889999999999877
No 448
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=24.52 E-value=99 Score=28.30 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=27.4
Q ss_pred cceEEEEecCCCCCc---------cccHHHHHHHHhhCCcEEEEec
Q 020633 54 VKATVYMTHGYGSDT---------GWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~---------~~~~~~~~~~l~~~g~~v~~~d 90 (323)
.+.+||+.|...... ...|....+.|.++||+++.++
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~ 92 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVD 92 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHH
Confidence 356788888875321 1157788889999999999987
No 449
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=24.51 E-value=4.1e+02 Score=23.57 Aligned_cols=77 Identities=10% Similarity=0.082 Sum_probs=43.8
Q ss_pred ceEEEEecCCCCC--ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC-----C
Q 020633 55 KATVYMTHGYGSD--TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP-----Y 127 (323)
Q Consensus 55 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-----~ 127 (323)
+|-+|++-+.+.. .......+++.+...|..|+.++.+|+..+.. ..+..-+.++++.+..... .
T Consensus 85 ~P~~I~V~sTC~selIGdDi~~~~~~~~~~~~pvi~v~t~gf~g~~~--------~g~~~al~~lv~~~~~~~~~~~~~~ 156 (511)
T TIGR01278 85 KPDLIVVTPSCTSSLLQEDLGNLAAAAGLDKSKVIVADVNAYRRKEN--------QAADRTLTQLVRRFAKEQPKPGRTT 156 (511)
T ss_pred CCCEEEEeCCChHHHhccCHHHHHHHhccCCCcEEEecCCCcccchh--------HHHHHHHHHHHHHHHhccccccccC
Confidence 4556666665432 12255677777765578999999999866521 2222334444444322100 1
Q ss_pred CCCCeEEEEech
Q 020633 128 RDLPGFLFGESM 139 (323)
Q Consensus 128 ~~~~~~l~G~S~ 139 (323)
....|.|+|.+.
T Consensus 157 ~~~~VNIiG~~~ 168 (511)
T TIGR01278 157 EKPSVNLLGPAS 168 (511)
T ss_pred CCCcEEEEeCCC
Confidence 244699999874
No 450
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.43 E-value=1.5e+02 Score=22.90 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=23.4
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.++|-|..+... .-..+++.|+++|+.|+..+.+
T Consensus 7 ~vlItGas~~~g-iG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 7 IALVTGASRLNG-IGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred EEEEeCCCCCCC-HHHHHHHHHHHcCCcEEEEcCC
Confidence 456666543222 4456888999999999998764
No 451
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=24.42 E-value=1.7e+02 Score=19.79 Aligned_cols=34 Identities=9% Similarity=0.054 Sum_probs=18.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
+.+++||++...+..+. ..+..|...||.|..+|
T Consensus 85 ~~~~vvvyC~~~G~rs~----~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRSQ----SLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccHH----HHHHHHHHcCCceeEeC
Confidence 34678888852222222 22234545699866554
No 452
>PRK07326 short chain dehydrogenase; Provisional
Probab=24.41 E-value=1.5e+02 Score=22.45 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=21.1
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
.+++.|.++. .-..++..|.++|+.|++++.
T Consensus 8 ~ilItGatg~---iG~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKG---IGFAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCc---HHHHHHHHHHHCCCEEEEeeC
Confidence 4455554433 445678888888999999874
No 453
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=24.39 E-value=1.5e+02 Score=25.09 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=34.5
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
...+.|-+--+|-+.. .-..+.+.|.+.||.|++|---|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp-~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTP-CVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHH-HHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 3456777777776665 777888899999999999999999854
No 454
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=24.36 E-value=3.9e+02 Score=21.69 Aligned_cols=96 Identities=11% Similarity=-0.036 Sum_probs=56.4
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc-------------------CCChHHHhhcHHHH
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY-------------------LGDMEKVAASSLSF 117 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-------------------~~~~~~~~~d~~~~ 117 (323)
..|++-|.+.+.+.....+++.....|-.++.+|.--.+........ ...-..++.--.++
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 45677777776654666677777778999999997543222110000 00011112222355
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
.+.+..+.. -.-++-+|-|.|..++.-.+...|--
T Consensus 83 ~r~l~sR~d--V~gmig~GGsgGT~lit~~m~~LPlg 117 (401)
T COG5441 83 VRFLSSRGD--VAGMIGMGGSGGTALITPAMRRLPLG 117 (401)
T ss_pred HHHhhcccc--hhheeecCCCcchHhhhhHHHhcCcC
Confidence 566665543 33577788899988888888777754
No 455
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=24.29 E-value=1.5e+02 Score=23.34 Aligned_cols=33 Identities=12% Similarity=0.028 Sum_probs=22.9
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
+++|-|.+.+.. .-..+++.|+++|+.|+..+.
T Consensus 7 ~~lItGas~~~G-IG~aiA~~la~~G~~Vil~~r 39 (274)
T PRK08415 7 KGLIVGVANNKS-IAYGIAKACFEQGAELAFTYL 39 (274)
T ss_pred EEEEECCCCCCC-HHHHHHHHHHHCCCEEEEEec
Confidence 455666542233 556788999999999988764
No 456
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=24.27 E-value=2.5e+02 Score=19.49 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=28.7
Q ss_pred CcceEEEEecCCCCCc---cccHHHHHHHHhhCCc---EEEEecCCC
Q 020633 53 KVKATVYMTHGYGSDT---GWMFQKICISFATWGY---AVFAADLLG 93 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~---~~~~~~~~~~l~~~g~---~v~~~d~~G 93 (323)
.+.-+||+.|+..+.. ...+..+.+.|...|| .+++++..+
T Consensus 15 Ek~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 15 EKNVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cCcEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 3467888889987542 2266778899988898 466666654
No 457
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=24.05 E-value=83 Score=22.24 Aligned_cols=13 Identities=31% Similarity=0.585 Sum_probs=11.3
Q ss_pred eEEEEechhHHHH
Q 020633 132 GFLFGESMGGAAT 144 (323)
Q Consensus 132 ~~l~G~S~Gg~~a 144 (323)
.+++|.|.|+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 6899999999873
No 458
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=24.02 E-value=4e+02 Score=21.76 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=43.8
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecC----CCC--cCCC----------------CCcccCCChHHHhh
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADL----LGH--GRSD----------------GIRCYLGDMEKVAA 112 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~ 112 (323)
+.+++|=|-.++.. ..++-.|+++ |-.||..|- +|. |... .++...++..++..
T Consensus 3 ~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 44555555543322 1334445444 667888883 333 2211 11222457888889
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEec
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGES 138 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S 138 (323)
++...++.+..+ +.-.+++|-|
T Consensus 80 ~a~~~i~~i~~r----gk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILAR----GKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhC----CCCcEEEccH
Confidence 999999999876 3345777755
No 459
>PRK08177 short chain dehydrogenase; Provisional
Probab=24.02 E-value=1.5e+02 Score=22.35 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=22.0
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
+++.|..+. .-..+++.|+++|+.|++++..
T Consensus 4 vlItG~sg~---iG~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 4 ALIIGASRG---LGLGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred EEEeCCCch---HHHHHHHHHHhCCCEEEEEeCC
Confidence 455555432 4456788899999999999865
No 460
>PLN02924 thymidylate kinase
Probab=23.72 E-value=1.8e+02 Score=22.16 Aligned_cols=41 Identities=10% Similarity=0.056 Sum_probs=29.8
Q ss_pred CcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCC
Q 020633 53 KVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G 93 (323)
.+.+.+|.+=|..++. ...-..+.+.|..+|+.|+....|+
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 3456777778876553 3356678888888899998877775
No 461
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=23.71 E-value=1.5e+02 Score=23.06 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=32.0
Q ss_pred EEecCCCCCccccHHHH-HHHHhhC-CcEEEEecCC-CCcCCC--CCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 59 YMTHGYGSDTGWMFQKI-CISFATW-GYAVFAADLL-GHGRSD--GIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~-~~~l~~~-g~~v~~~d~~-G~G~s~--~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
|.+-|=|+........+ +..|.++ ||.|+++|-- ..+... +.. .......+..++++.....
T Consensus 3 IaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDpd~nL~~~LGve----~~~~~lg~~~e~~~k~~~a 69 (255)
T COG3640 3 IAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADPDSNLPEALGVE----EPMKYLGGKRELLKKRTGA 69 (255)
T ss_pred EEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCCCCCChHHhcCCC----CCCcccccHHHHHHHHhcc
Confidence 45556655543244444 5555555 5999999853 122111 111 1133456666676666443
No 462
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=23.66 E-value=2.5e+02 Score=21.46 Aligned_cols=47 Identities=11% Similarity=0.078 Sum_probs=30.5
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhH----HHHHHHhhhcCCCceeEEEEccC
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGG----AATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg----~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
.++.++|..+..-. +.+.++.-.|-|+ .+++..|+++..- .+|++-|
T Consensus 27 p~~aEfISAlAAG~---nAkliVe~~s~g~~~~ttiaLaaAAr~TgG---R~vCIvp 77 (218)
T PF07279_consen 27 PGVAEFISALAAGW---NAKLIVEAWSSGGAISTTIALAAAARQTGG---RHVCIVP 77 (218)
T ss_pred CCHHHHHHHHhccc---cceEEEEEecCCCchHhHHHHHHHHHhcCC---eEEEEcC
Confidence 34566777776543 5588888888875 5677777776653 4455544
No 463
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=23.54 E-value=1.8e+02 Score=25.32 Aligned_cols=63 Identities=11% Similarity=0.175 Sum_probs=39.4
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC-Cc-------hhHHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PD-------ENANLVLKDMREWIDERV 315 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~-------~~~~~~~~~i~~fl~~~~ 315 (323)
..-|++.+|..|++-..... . ....++....+.|++|+.-+-- ++ ..+..+.+.+..||+...
T Consensus 433 atnVvf~NG~~DPWh~LG~~----~-st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~~~ 503 (514)
T KOG2182|consen 433 ATNVVFPNGSLDPWHALGLQ----N-STDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQQP 503 (514)
T ss_pred cceEEecCCCCCchhhhccc----c-CCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhhcc
Confidence 56799999999987543221 1 2234577888999999886321 11 234455566666666544
No 464
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=23.44 E-value=2.2e+02 Score=18.50 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=20.2
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
.+++||++.+.... .-...+..|...||.|..++
T Consensus 64 ~~~vvvyc~~g~~~---~s~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 64 EKLFVVYCDGPGCN---GATKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCeEEEEECCCCCc---hHHHHHHHHHHcCCeEEEec
Confidence 46777777654311 22345566777899866553
No 465
>PRK03094 hypothetical protein; Provisional
Probab=23.43 E-value=1e+02 Score=19.00 Aligned_cols=19 Identities=16% Similarity=0.295 Sum_probs=15.7
Q ss_pred HHHHHHHHhhCCcEEEEec
Q 020633 72 FQKICISFATWGYAVFAAD 90 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d 90 (323)
...+.+.|.++||.|+-++
T Consensus 10 Ls~i~~~L~~~GYeVv~l~ 28 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLR 28 (80)
T ss_pred cHHHHHHHHHCCCEEEecC
Confidence 4567889999999998775
No 466
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=23.26 E-value=1.7e+02 Score=22.79 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=23.0
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
.|+++=|-|.+.. .---.++.|..+||.|.++-
T Consensus 62 ~V~VlcG~GNNGG-DGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGG-DGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCch-hHHHHHHHHHHCCCeEEEEE
Confidence 4666666665655 34467888988999987765
No 467
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=23.21 E-value=1.5e+02 Score=23.53 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=17.1
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEe
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAA 89 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~ 89 (323)
|++.|.|.+.. .-..+...|..-|..++..
T Consensus 131 I~i~G~G~s~~-~A~~~~~~l~~~g~~~~~~ 160 (278)
T PRK11557 131 IILTGIGASGL-VAQNFAWKLMKIGINAVAE 160 (278)
T ss_pred EEEEecChhHH-HHHHHHHHHhhCCCeEEEc
Confidence 55566655433 4455566666667666553
No 468
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=23.18 E-value=3.2e+02 Score=20.34 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=44.0
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCC--cccccCCCchhHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY--HSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--H~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.....+.+++.+-+-+.++.+....+.+.........+.....| |-.+ .-+...+.+.+.+|+.+.
T Consensus 82 l~~~~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~~~~~~~~~~g~~~Pl~----aly~~~l~~~l~~~l~~g 150 (192)
T COG0746 82 LRHFGTEWVLVLPCDMPFIPPELVERLLSAFKQTGAAIVPAHDDGRLEPLF----ALYHRALLPALEEYLAKG 150 (192)
T ss_pred HHhCCCCeEEEEecCCCCCCHHHHHHHHHhhcccCCcEEEeCCCCceeeEE----EEehHHHHHHHHHHHHhC
Confidence 344457788888888899999999999888743233444444445 4333 233555777888877654
No 469
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=23.14 E-value=1.6e+02 Score=22.97 Aligned_cols=32 Identities=9% Similarity=0.049 Sum_probs=22.2
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
+++|-|.++... .-..+++.|+++|++|+..+
T Consensus 10 ~~lITGas~~~G-IG~a~a~~la~~G~~v~~~~ 41 (260)
T PRK06603 10 KGLITGIANNMS-ISWAIAQLAKKHGAELWFTY 41 (260)
T ss_pred EEEEECCCCCcc-hHHHHHHHHHHcCCEEEEEe
Confidence 556666654323 44577889999999998765
No 470
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=23.09 E-value=1.1e+02 Score=26.72 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=47.5
Q ss_pred CcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc-HHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-SLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~ 130 (323)
...++||++-|+.+.. +..-..+...|..+||+|+++--| +-++...+ +-.+-+++-. .+
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P-------------t~~E~~~~~lwRf~~~lP~-----~G 357 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP-------------TDEEKAQHYLWRFWRHIPR-----RG 357 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc-------------CHHHHcCcHHHHHHHhCCC-----CC
Confidence 3478999999996542 336778888999999999998765 33333333 4444444433 44
Q ss_pred CeEEEEechhH
Q 020633 131 PGFLFGESMGG 141 (323)
Q Consensus 131 ~~~l~G~S~Gg 141 (323)
.+.++=-|+=+
T Consensus 358 ~i~iFdRSwY~ 368 (493)
T TIGR03708 358 RITIFDRSWYG 368 (493)
T ss_pred eEEEEcCCccC
Confidence 78888777633
No 471
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.08 E-value=1.2e+02 Score=24.22 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=27.2
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEec--hhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGES--MGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 150 (323)
..+.+++++...+. .+.+++++|.| +|.-++.++..+
T Consensus 143 ~avi~lL~~~~i~l--~Gk~v~vIG~S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 143 AGIMEMFREYNVEL--EGKHAVVIGRSNIVGKPMAQLLLDK 181 (284)
T ss_pred HHHHHHHHHhCCCC--CCCEEEEECCCCcCcHHHHHHHHHC
Confidence 44566676665443 37789999997 899999988765
No 472
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.88 E-value=2.3e+02 Score=21.17 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=20.9
Q ss_pred CCCeEEEEechhHHHHHHHhhhcC
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
+.+++++|.+-.|.+|..++.+..
T Consensus 45 g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 45 GARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHcC
Confidence 559999999999999999998753
No 473
>PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown.; PDB: 2K4M_A.
Probab=22.85 E-value=95 Score=21.21 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=15.8
Q ss_pred HHHHHHHHhhCCcEEEEecCCCC
Q 020633 72 FQKICISFATWGYAVFAADLLGH 94 (323)
Q Consensus 72 ~~~~~~~l~~~g~~v~~~d~~G~ 94 (323)
+...+..|.++|+.|++.|..-.
T Consensus 25 ~~~vA~~L~~~G~dV~~tDi~~~ 47 (127)
T PF03686_consen 25 NPEVAKKLKERGFDVIATDINPR 47 (127)
T ss_dssp --HHHHHHHHHS-EEEEE-SS-S
T ss_pred CHHHHHHHHHcCCcEEEEECccc
Confidence 44678899999999999998754
No 474
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=22.80 E-value=1.2e+02 Score=23.79 Aligned_cols=83 Identities=19% Similarity=0.180 Sum_probs=43.2
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCC-------cEEEEecCCCCcCCCCCc--cc------CCChHHHhhcHHHHHHHHH
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWG-------YAVFAADLLGHGRSDGIR--CY------LGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g-------~~v~~~d~~G~G~s~~~~--~~------~~~~~~~~~d~~~~l~~l~ 122 (323)
-|++.|.|...--.-+.+...+.+.| -+++.+|..|-=..+... .. ......-..++.++++.++
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~k 106 (254)
T cd00762 27 KVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAAK 106 (254)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhhC
Confidence 34555665432213344445544433 268999999852222110 00 0000111246777777665
Q ss_pred hcCCCCCCCeEEEEech-hHHHHHHHh
Q 020633 123 DSEPYRDLPGFLFGESM-GGAATMLMY 148 (323)
Q Consensus 123 ~~~~~~~~~~~l~G~S~-Gg~~a~~~a 148 (323)
+-+++|-|- ||.+.-...
T Consensus 107 --------ptvlIG~S~~~g~ft~evv 125 (254)
T cd00762 107 --------PDFLIGVSRVGGAFTPEVI 125 (254)
T ss_pred --------CCEEEEeCCCCCCCCHHHH
Confidence 569999998 886654443
No 475
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=22.65 E-value=4.1e+02 Score=21.33 Aligned_cols=85 Identities=16% Similarity=0.219 Sum_probs=49.3
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+++++.+.|.+-+.+- | |.+.... .+.++..+-+..+++....+ .+ +++|-+.+-.-+..++..
T Consensus 22 ~l~~l~~~l~~~Gv~gi~v~--G---stGE~~~-Ls~eEr~~l~~~~~~~~~~~-----~p-vi~gv~~~t~~~i~~a~~ 89 (289)
T cd00951 22 AYRAHVEWLLSYGAAALFAA--G---GTGEFFS-LTPDEYAQVVRAAVEETAGR-----VP-VLAGAGYGTATAIAYAQA 89 (289)
T ss_pred HHHHHHHHHHHcCCCEEEEC--c---CCcCccc-CCHHHHHHHHHHHHHHhCCC-----CC-EEEecCCCHHHHHHHHHH
Confidence 55677888888888777653 2 1122111 26676666666677765422 13 444554445555555555
Q ss_pred cCCCceeEEEEccCccc
Q 020633 151 SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 151 ~p~~~v~~~vl~~~~~~ 167 (323)
..+..+++++++.|.+.
T Consensus 90 a~~~Gad~v~~~pP~y~ 106 (289)
T cd00951 90 AEKAGADGILLLPPYLT 106 (289)
T ss_pred HHHhCCCEEEECCCCCC
Confidence 44434888888777654
No 476
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=22.60 E-value=1.4e+02 Score=21.48 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=26.3
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEec--hhHHHHHHHhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGES--MGGAATMLMYFQ 150 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 150 (323)
......+.+++++...+. .+.+++++|.| .|--++..+..+
T Consensus 17 PcTp~aii~lL~~~~~~l--~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 17 PCTPLAIIELLEYYGIDL--EGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp -HHHHHHHHHHHHTT-ST--TT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCCC--CCCEEEEECCcCCCChHHHHHHHhC
Confidence 334566777777755443 37789999999 588888777665
No 477
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=22.52 E-value=2.9e+02 Score=20.50 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=23.3
Q ss_pred EEEEecCCCCCccccHHHHHHHHhh----CCcEEEEecCCCCcCC
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFAT----WGYAVFAADLLGHGRS 97 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~----~g~~v~~~d~~G~G~s 97 (323)
-+++.-.-|+........++..++. ....++.+|..|.+..
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~ 84 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLA 84 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCG
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccc
Confidence 4444444444444344556666665 5789999999876443
No 478
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=22.52 E-value=1.4e+02 Score=21.44 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=18.2
Q ss_pred cHHHHHHHHhhCCcEEEEecCC
Q 020633 71 MFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.-..++..|+++|++|+.+|.=
T Consensus 16 ~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 16 TTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred HHHHHHHHHHhCCCeEEEEeCC
Confidence 4567888899999999999764
No 479
>PRK06953 short chain dehydrogenase; Provisional
Probab=22.46 E-value=1.7e+02 Score=21.96 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=22.0
Q ss_pred EEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 59 YMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 59 v~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
+++.|..+. .-..+++.|.++|++|+.++..
T Consensus 4 vlvtG~sg~---iG~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 4 VLIVGASRG---IGREFVRQYRADGWRVIATARD 34 (222)
T ss_pred EEEEcCCCc---hhHHHHHHHHhCCCEEEEEECC
Confidence 556665543 4456788888899999998753
No 480
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=22.28 E-value=94 Score=25.08 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=18.6
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+++|+|+|=|+.+.-.+...
T Consensus 192 ~~~~~LiGFSKGcvVLNqll~E 213 (303)
T PF10561_consen 192 KPPLTLIGFSKGCVVLNQLLYE 213 (303)
T ss_pred CCceEEEEecCcchHHHHHHHH
Confidence 4589999999999998777765
No 481
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=22.27 E-value=1.9e+02 Score=18.32 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=17.6
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcE-EEEec
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYA-VFAAD 90 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~d 90 (323)
.++.||++.+.. .+. ..+..|...||. |+.++
T Consensus 61 ~~~ivvyC~~G~-rs~----~a~~~L~~~G~~~v~~l~ 93 (101)
T cd01518 61 GKKVLMYCTGGI-RCE----KASAYLKERGFKNVYQLK 93 (101)
T ss_pred CCEEEEECCCch-hHH----HHHHHHHHhCCcceeeec
Confidence 356777776532 222 234566677885 65543
No 482
>PRK09135 pteridine reductase; Provisional
Probab=22.19 E-value=1.7e+02 Score=22.37 Aligned_cols=32 Identities=19% Similarity=0.112 Sum_probs=22.8
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+++-|..+. .-..+++.|.++|+.|+.++.+
T Consensus 8 ~vlItGa~g~---iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 8 VALITGGARR---IGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3555555432 4457888899999999999865
No 483
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=22.18 E-value=1.7e+02 Score=22.90 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=22.4
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
+++|-|.++... .-..+++.|+++|++|+..+
T Consensus 8 ~~lITGas~~~G-IG~aia~~la~~G~~vil~~ 39 (262)
T PRK07984 8 RILVTGVASKLS-IAYGIAQAMHREGAELAFTY 39 (262)
T ss_pred EEEEeCCCCCcc-HHHHHHHHHHHCCCEEEEEe
Confidence 456666653223 45578899999999998775
No 484
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=22.14 E-value=1.7e+02 Score=22.97 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=22.6
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEec
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d 90 (323)
++++-|.++++. .-..++..|+++|++|+..+
T Consensus 9 ~~lVTGas~~~G-IG~aiA~~la~~Ga~V~~~~ 40 (271)
T PRK06505 9 RGLIMGVANDHS-IAWGIAKQLAAQGAELAFTY 40 (271)
T ss_pred EEEEeCCCCCCc-HHHHHHHHHHhCCCEEEEec
Confidence 455666553223 55678899999999998876
No 485
>PRK05717 oxidoreductase; Validated
Probab=22.10 E-value=1.7e+02 Score=22.63 Aligned_cols=31 Identities=26% Similarity=0.269 Sum_probs=22.4
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
.++|-|..+. .-..+++.|.++|+.|+..|.
T Consensus 12 ~vlItG~sg~---IG~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 12 VALVTGAARG---IGLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred EEEEeCCcch---HHHHHHHHHHHcCCEEEEEcC
Confidence 4556665433 445788899999999999874
No 486
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=22.03 E-value=2.1e+02 Score=22.24 Aligned_cols=60 Identities=10% Similarity=0.110 Sum_probs=41.9
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEE---EechhHHHHH-HHhhhcCCCceeEEEEccCcccC
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLF---GESMGGAATM-LMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~---G~S~Gg~~a~-~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
+-.++..++..++.......+ +.+.++. |+++-|..|. .++...|.. |+++.+++|....
T Consensus 18 ~~~~Ls~QL~~wL~~~~~~~~--paRaiIaPHAGY~YcG~~Aa~ay~qvdps~-v~RIFILGPSHHv 81 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQVTLTKG--PARAIIAPHAGYTYCGSCAAYAYKQVDPSN-VQRIFILGPSHHV 81 (296)
T ss_pred CHHHHHHHHHHHHhccCCCCC--CceEEEcCCCCcccchHHHHHHHhhcChhH-eeEEEEecCccee
Confidence 557777888888888777654 4466654 7787665554 445556776 9999999986553
No 487
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=21.98 E-value=1.7e+02 Score=18.63 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=15.5
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG 65 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~ 65 (323)
.++...++ ++.|... + ...+|++||+-
T Consensus 50 lR~r~g~~yRiif~~~-~-----~~~vvll~gf~ 77 (95)
T TIGR02683 50 LRIDFGPGYRVYFTQR-G-----KVIILLLCGGD 77 (95)
T ss_pred EEecCCCCEEEEEEEE-C-----CEEEEEEeCEe
Confidence 33433335 6655444 2 34889999975
No 488
>PF00148 Oxidored_nitro: Nitrogenase component 1 type Oxidoreductase; InterPro: IPR000510 Enzymes belonging to this family include cofactor-requiring nitrogenases and protochlorophyllide reductase. The key enzymatic reactions in nitrogen fixation are catalysed by the nitrogenase complex, which has two components, the iron protein (component 2), and a component (component 1) which is either a molybdenum-iron, vanadium-iron or iron-iron protein. The enzyme (1.18.6.1 from EC) forms a hexamer of two alpha, two beta and two delta chains. Protochlorophyllide reductase (1.3.1.33 from EC) is involved in the light-dependent accumulation of chlorophyll, probably at the step of reduction of protochlorophyllide to chlorophyllide.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QH1_C 1QH8_A 1H1L_C 1QGU_A 3AEK_C 3AET_C 3AER_C 3AEU_A 3AES_C 3AEQ_C ....
Probab=21.90 E-value=2.5e+02 Score=23.68 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=38.6
Q ss_pred cHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh-cCCCCCCCeEEEEec-hh
Q 020633 71 MFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD-SEPYRDLPGFLFGES-MG 140 (323)
Q Consensus 71 ~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~~~l~G~S-~G 140 (323)
.+..+++.+.++ |..|+.++.+|+..+ ...-+..-+.++++.+.. ....+...|.|+|.+ ++
T Consensus 92 D~~~v~~~~~~~~~~~vi~v~~~gf~~~--------~~~G~~~a~~~l~~~~~~~~~~~~~~~VNiiG~~~~~ 156 (398)
T PF00148_consen 92 DIEAVARELQEEYGIPVIPVHTPGFSGS--------YSQGYDAALRALAEQLVKPPEEKKPRSVNIIGGSPLG 156 (398)
T ss_dssp THHHHHHHHHHHHSSEEEEEE--TTSSS--------HHHHHHHHHHHHHHHHTTGTTTTSSSEEEEEEESTBT
T ss_pred CHHHHHHHhhcccCCcEEEEECCCccCC--------ccchHHHHHHHHHhhcccccccCCCCceEEecCcCCC
Confidence 677788888765 669999999999333 223344556666666632 222234578999998 55
No 489
>PRK05876 short chain dehydrogenase; Provisional
Probab=21.88 E-value=1.7e+02 Score=23.12 Aligned_cols=32 Identities=22% Similarity=0.102 Sum_probs=22.8
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 92 (323)
.+++-|..+. .-..+++.|+++|++|+..+.+
T Consensus 8 ~vlVTGas~g---IG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 8 GAVITGGASG---IGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3556665533 4457888999999999988754
No 490
>PF13728 TraF: F plasmid transfer operon protein
Probab=21.87 E-value=2.5e+02 Score=21.36 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=32.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRS 97 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s 97 (323)
...++|.-|.+..+. .+.++...|+++ |+.|+.++.=|.+..
T Consensus 122 ~gL~~F~~~~C~~C~-~~~pil~~~~~~yg~~v~~vs~DG~~~~ 164 (215)
T PF13728_consen 122 YGLFFFYRSDCPYCQ-QQAPILQQFADKYGFSVIPVSLDGRPIP 164 (215)
T ss_pred eEEEEEEcCCCchhH-HHHHHHHHHHHHhCCEEEEEecCCCCCc
Confidence 457777777766555 677888888765 999999998887765
No 491
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=21.83 E-value=5e+02 Score=22.01 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=54.2
Q ss_pred cceEEEEecCCCCCc------cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC
Q 020633 54 VKATVYMTHGYGSDT------GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 127 (323)
+...||++||=.-+. ...|..+++.+.++|+ +-.+|.-..|..++ +++-+.-+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G-------leeDa~~lR~~a~~~------ 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG-------LEEDAYALRLFAEVG------ 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc-------hHHHHHHHHHHHHhC------
Confidence 456899999865331 2388999999988865 45567665554432 233223333332221
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
+-.++..|+.=..++ |.++ |-++.+++.
T Consensus 236 ---~~~lva~S~SKnfgL-----YgER-VGa~~vva~ 263 (396)
T COG1448 236 ---PELLVASSFSKNFGL-----YGER-VGALSVVAE 263 (396)
T ss_pred ---CcEEEEehhhhhhhh-----hhhc-cceeEEEeC
Confidence 337888887655544 5677 888888864
No 492
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=21.76 E-value=3e+02 Score=21.88 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=22.6
Q ss_pred EEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCc
Q 020633 57 TVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 57 ~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G 95 (323)
++|++-|+++++. ..-..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 5788888887653 24456777777788999888855444
No 493
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=21.75 E-value=4.6e+02 Score=22.56 Aligned_cols=77 Identities=9% Similarity=0.004 Sum_probs=44.3
Q ss_pred ceEEEEecCCCCC--ccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC------
Q 020633 55 KATVYMTHGYGSD--TGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE------ 125 (323)
Q Consensus 55 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~------ 125 (323)
+|-+|++...+.. .......+++.+.+ .|..|+.++.+|+..+. ...+...+..+++.+....
T Consensus 85 ~p~~I~v~~tC~~~iIGdDi~~v~~~~~~~~~~~vi~v~t~gf~g~~--------~~g~~~al~~l~~~~~~~~~~~~~~ 156 (430)
T cd01981 85 KPDLIVLTPTCTSSILQEDLQNFVRAAGLSSKSPVLPLDVNHYRVNE--------LQAADETFEQLVRFYAEKARPQGTP 156 (430)
T ss_pred CCCEEEEeCCccHHHHhhCHHHHHHHhhhccCCCeEEecCCCccchH--------HHHHHHHHHHHHHHHhccccccccc
Confidence 4557777766433 22256667766653 47899999999986552 1222333444555442211
Q ss_pred --CCCCCCeEEEEech
Q 020633 126 --PYRDLPGFLFGESM 139 (323)
Q Consensus 126 --~~~~~~~~l~G~S~ 139 (323)
......+.|+|.+.
T Consensus 157 ~~~~~~~~VNiiG~~~ 172 (430)
T cd01981 157 REKTEKPSVNLIGPSS 172 (430)
T ss_pred cccCCCCcEEEEcCCC
Confidence 11134699999874
No 494
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.69 E-value=71 Score=24.98 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=16.3
Q ss_pred EEEEechhHHHHHHHhhh
Q 020633 133 FLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~ 150 (323)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 699999999999998876
No 495
>PF10691 DUF2497: Protein of unknown function (DUF2497) ; InterPro: IPR019632 Members of this family belong to the Alphaproteobacteria. The function of the family is not known.
Probab=21.50 E-value=64 Score=19.51 Aligned_cols=19 Identities=21% Similarity=0.560 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q 020633 299 NANLVLKDMREWIDERVER 317 (323)
Q Consensus 299 ~~~~~~~~i~~fl~~~~~~ 317 (323)
..+-+-..+.+||+++++.
T Consensus 39 vremLRPmLkeWLD~nLP~ 57 (73)
T PF10691_consen 39 VREMLRPMLKEWLDENLPG 57 (73)
T ss_pred HHHHHHHHHHHHHHhccHH
Confidence 4444556778899988753
No 496
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=21.45 E-value=3.3e+02 Score=20.07 Aligned_cols=12 Identities=42% Similarity=0.747 Sum_probs=9.5
Q ss_pred EEEecCCCCcCCC
Q 020633 86 VFAADLLGHGRSD 98 (323)
Q Consensus 86 v~~~d~~G~G~s~ 98 (323)
+|++| ||||..+
T Consensus 2 ~I~iD-pGHGg~d 13 (189)
T TIGR02883 2 IIVID-PGHGGID 13 (189)
T ss_pred EEEEe-CCCCCCC
Confidence 67788 7998776
No 497
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=21.43 E-value=4.3e+02 Score=22.59 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=44.9
Q ss_pred ceEEEEecCCCCCc--cccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDT--GWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~--~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
+|-+|++...+... ......+++.+.+ .|..|+.++-+|+..+- .. .++. -+.++++.+.......+..
T Consensus 84 ~P~~I~V~tTC~se~IGDDi~~v~~~~~~~~~~pVi~v~tpgf~g~~-~~----G~~~---~~~alv~~~~~~~~~~~~~ 155 (407)
T TIGR01279 84 NPSVIFLLSSCTPEVIKMDLEGLAERLSTNFGVPVLFAPASGLDYTF-TQ----GEDT---VLAALVPFCPEAPASEQRA 155 (407)
T ss_pred CCCEEEEECCchHHHHHhhHHHHHHHHHHhhCCCEEEeeCCCccccH-HH----HHHH---HHHHHHHhhccccCCCCCc
Confidence 57788888876432 2255666666643 48899999999884431 11 1233 3344444443211111246
Q ss_pred eEEEEechhHH
Q 020633 132 GFLFGESMGGA 142 (323)
Q Consensus 132 ~~l~G~S~Gg~ 142 (323)
+.++|.-..+-
T Consensus 156 vniiG~~~~~d 166 (407)
T TIGR01279 156 LVLVGSVNDIV 166 (407)
T ss_pred EEEEeccChhh
Confidence 78888766543
No 498
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.38 E-value=67 Score=25.99 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=15.2
Q ss_pred EEEEechhHHHHHHHhh
Q 020633 133 FLFGESMGGAATMLMYF 149 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~ 149 (323)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68999999999998874
No 499
>PRK08339 short chain dehydrogenase; Provisional
Probab=21.35 E-value=1.9e+02 Score=22.63 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=22.2
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecC
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 91 (323)
++++-|..+. .-..+++.|+++|++|+..+.
T Consensus 10 ~~lItGas~g---IG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKG---IGFGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCc---HHHHHHHHHHHCCCEEEEEeC
Confidence 4555665433 445788899999999998874
No 500
>PRK06091 membrane protein FdrA; Validated
Probab=21.35 E-value=6.1e+02 Score=22.86 Aligned_cols=86 Identities=12% Similarity=0.000 Sum_probs=0.0
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+.++||-.|+ ... .-..+.+...+.|.+++.+|. |.+...+....+...-. .++|.+
T Consensus 142 ~~viI~S~gf--g~~-~E~~L~e~Ar~~GlrvmGPNC-G~~~i~gl~lsF~~~~~-------------------~G~Igi 198 (555)
T PRK06091 142 LNVMMFSDNV--TLE-DEIRLKTRAREKGLLVMGPDC-GTAMIAGTPLAFANVMP-------------------EGNIGV 198 (555)
T ss_pred CeEEEEcCCC--CHH-HHHHHHHHHHHcCCEEECCCC-hhhhhcCCcccccCCCC-------------------CCCEEE
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
++.|-++...+..........++.+|.++
T Consensus 199 VSQSGtl~~~v~~~a~~~GiG~S~~Vs~G 227 (555)
T PRK06091 199 IGASGTGIQELCSQIALAGEGITHAIGLG 227 (555)
T ss_pred EeCcHHHHHHHHHHHHHcCCCeEEEEECC
Done!