BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020635
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 184/304 (60%), Gaps = 5/304 (1%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L+ FY +CP AE++V V A N +A L+R+HFHDCFVRGCDASVL+DST +
Sbjct: 1 DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTAN 60
Query: 84 NSGEKDALPNE-TLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
N+ EKDA+PN +L GF+VI K+ +E CP VSCADI+A AARDS + T ++V
Sbjct: 61 NTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNIT-YQV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFF 202
+GRRDG +SLASEAN +PSP FN + L SF N LT ++V LSG H++GV C F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 203 RDRLYNFTGKGDADPSLNPTYAAFLRTKC--RNVEDNKTAVGMDPGSDLSFDTNYFKILT 260
+RLYNF DP+L+P+YAA LR C + V +D + D Y+ +
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239
Query: 261 QHKGLFQSDAALLTDKGARNFVNV-LLDSKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKC 319
GL SD AL+T+ V ++ + +F +M +MG I VLTG GEIR C
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNC 299
Query: 320 NVIN 323
+V+N
Sbjct: 300 SVVN 303
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 182/304 (59%), Gaps = 5/304 (1%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY ETCP IV +++ + +P + A L+R+HFHDCFV+GCD SVL+++T++
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
E+DALPN ++ G DV+ ++KT +E CP VSCADI+A+AA + S W V
Sbjct: 61 IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAA-EIASVLGGGPGWPV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFF 202
GRRD + + AN+++P+PFFN + L+ SF GL DLV LSGGHT G RC F
Sbjct: 120 PLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTF 179
Query: 203 RDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQH 262
+RLYNF+ G+ DP+LN TY LR +C +D + FD Y+ L Q
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239
Query: 263 KGLFQSDAALLTDKGARN--FVNVLLDSKR-FFMEFGLSMKRMGAIGVLTGNSGEIRKKC 319
GL QSD L + GA VN ++ FF F +SM +MG IGVLTG+ GEIR +C
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQC 299
Query: 320 NVIN 323
N +N
Sbjct: 300 NFVN 303
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 174/309 (56%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V MD + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 240 bits (612), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 173/304 (56%), Gaps = 5/304 (1%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY TCP A IV + + + + + A L+R+HFHDCFV GCDAS+L+D T S
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EK+A PN + GF+V++ +KT LE CPG+VSC+D++ALA+ SVS + W V
Sbjct: 62 IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPS-WTV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFF 202
L GRRD + + AN +PSP + S++ F GL +DLV LSG HT G RC F
Sbjct: 121 LLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVF 180
Query: 203 RDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQH 262
+RL+NF+G G+ DP+LN T + L+ C T +D + +FD NYF L +
Sbjct: 181 NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSN 240
Query: 263 KGLFQSDAALLTDKGARNFVNVL---LDSKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKC 319
GL QSD L + G+ V + FF F SM MG I LTG++GEIR C
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
Query: 320 NVIN 323
+N
Sbjct: 301 KKVN 304
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 174/304 (57%), Gaps = 16/304 (5%)
Query: 25 LRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTESN 84
L NFY CP A + + + V A + A LLR+HFHDCFV+GCDASVL+D T +
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 85 SGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVL 143
+GEK A PN ++ GF+VI+ +K+++E CPG+VSCADI+A+AARDSV W VL
Sbjct: 62 TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSV-VALGGASWNVL 120
Query: 144 TGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFFR 203
GRRD + S AN D+P+PFFN S L +F N G T +LV LSG HT+G +C FR
Sbjct: 121 LGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180
Query: 204 DRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHK 263
R+YN + +++PTYA L+ C +V + D + FD Y+ L K
Sbjct: 181 TRIYN-------ESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKK 233
Query: 264 GLFQSDAALL----TDKGARNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKC 319
GL SD L TD + N ++ F +FG +M +MG + LTG SG+IR C
Sbjct: 234 GLLHSDQQLFNGVSTDSQVTAYSN---NAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNC 290
Query: 320 NVIN 323
N
Sbjct: 291 RKTN 294
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 173/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 173/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 173/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 173/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 172/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 121 PLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 172/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 121 PLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 173/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGH+ G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 172/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV L GGHT G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 172/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HF DCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 234 bits (598), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 172/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +LR+HFHDCFV GCDAS+L+D+T S
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 120
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CR
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRS 180
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 297
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 298 IRLNCRVVN 306
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 171/309 (55%), Gaps = 13/309 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L FY+ +CP NIV + + +P +AA +L +HF DCFV GCDAS+L+D+T S
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EKDA N + GF VI+ +K +E CP VSCAD++ +AA+ SV+ + W V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS-WRV 119
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT-VHDLVVLSGGHTLGVGRCRF 201
GRRD + AN ++P+PFF L+ SF N GL DLV LSGGHT G +CRF
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 202 FRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQ 261
DRLYNF+ G DP+LN TY LR C + V D + FD Y+ L +
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 262 HKGLFQSDAALLTDKGA-------RNFVNVLLDSKRFFMEFGLSMKRMGAIGVLTGNSGE 314
KGL QSD L + A R+F N ++ FF F +M RMG I LTG G+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN---STQTFFNAFVEAMDRMGNITPLTGTQGQ 296
Query: 315 IRKKCNVIN 323
IR C V+N
Sbjct: 297 IRLNCRVVN 305
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 172/306 (56%), Gaps = 5/306 (1%)
Query: 22 GGELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDST 81
GG L FY TCP A +V IV + + + A L+R+HFHDCFV GCDAS+L+D++
Sbjct: 1 GGSLNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNS 60
Query: 82 ESNSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLW 140
S EK+A PN + GF+V++ +KT LE CPG+VSC D++ALA++ SVS + W
Sbjct: 61 GSIISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPS-W 119
Query: 141 EVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCR 200
V GRRD + + AN +PSP S++ F GL +DLV LSG HT G C
Sbjct: 120 TVDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCG 179
Query: 201 FFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILT 260
F +RL+NF+GKG+ DP+LN T + L+ C + +D + +FD NYF L
Sbjct: 180 VFSNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQ 239
Query: 261 QHKGLFQSDAALLTDKGARNFVNVL---LDSKRFFMEFGLSMKRMGAIGVLTGNSGEIRK 317
+ GL QSD L + G+ V + FF F SM MG I LTG+SGEIR
Sbjct: 240 SNNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRL 299
Query: 318 KCNVIN 323
C N
Sbjct: 300 DCKKTN 305
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 172/306 (56%), Gaps = 13/306 (4%)
Query: 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTES 83
+L + Y ++CP IV V +AA L+R+HFHDCFV GCDAS+L+D +S
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60
Query: 84 NSGEKDALPN-ETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEV 142
EK A+PN + GF+VI+ +K +E CPG+VSCADI+ LAARDSV W V
Sbjct: 61 ---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPG-WRV 116
Query: 143 LTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFF 202
GR+DG ++ + AN ++PSPF ++ F L + D+V LSG HT G +C F
Sbjct: 117 ALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVF 175
Query: 203 RDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQH 262
+RL+NFTG G+ D +L + + L+T C ++ +D + +FD NYFK L +
Sbjct: 176 SNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEG 235
Query: 263 KGLFQSDAALLTDKGARNFVNVLLDS-----KRFFMEFGLSMKRMGAIGVLTGNSGEIRK 317
KGL SD L + A N L+++ FF +F +M RMG I G SGE+R
Sbjct: 236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRT 293
Query: 318 KCNVIN 323
C VIN
Sbjct: 294 NCRVIN 299
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 175/302 (57%), Gaps = 14/302 (4%)
Query: 28 NFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTESNSGE 87
+FY +TCP AE+IV V + + LAA LLR+HFHDCFV+GCDASVL+D + + GE
Sbjct: 12 DFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGE 71
Query: 88 KDALPNETL--GGFDVIEEVKTELEKKCPG-IVSCADIVALAARDSVSFQFKRTLWEVLT 144
+ A PN TL F + +++ LE++C G +VSC+DI+ALAARDSV + V
Sbjct: 72 QQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPD-YRVPL 130
Query: 145 GRRDGRISLASEAN--RDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFF 202
GRRD R S AS + D+P P N SL GL DLV +SGGHT+G+ C F
Sbjct: 131 GRRDSR-SFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSSF 189
Query: 203 RDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQH 262
DRL+ DP+++PT+ + L+ C ++ V +D + FD Y+ L
Sbjct: 190 EDRLFP-----RPDPTISPTFLSRLKRTCPAKGTDRRTV-LDVRTPNVFDNKYYIDLVNR 243
Query: 263 KGLFQSDAALLTDKGARNFVNVLLDSKR-FFMEFGLSMKRMGAIGVLTGNSGEIRKKCNV 321
+GLF SD L T+ R V S++ FF +FG+S+ +MG + V T + GE+R+ C+V
Sbjct: 244 EGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCSV 303
Query: 322 IN 323
N
Sbjct: 304 RN 305
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 32/156 (20%)
Query: 162 PSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNP 221
PSP L+ F GL ++V LSG HTLG R P
Sbjct: 136 PSPA---QHLRDVFYRMGLNDKEIVALSGAHTLGRSR----------------------P 170
Query: 222 TYAAFLRTKCRNVEDNKTAVGMDPGSD--LSFDTNYFKILTQHKG----LFQSDAALLTD 275
+ + + + + +D A G + L FD +YFK + + + + +DAAL D
Sbjct: 171 DRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKERRDEDLLVLPTDAALFED 230
Query: 276 KGARNFV-NVLLDSKRFFMEFGLSMKRMGAIGVLTG 310
+ + D + FF ++ + ++ +G G
Sbjct: 231 PSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGAKFG 266
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 149 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 182
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 183 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 232
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 233 DYAEAHQKLSELG 245
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 149 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 182
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 183 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 232
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 233 DYAEAHQKLSELG 245
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 149 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 182
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 183 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 232
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 233 DYAEAHQKLSELG 245
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G ++R F G ++P
Sbjct: 149 GLTDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 182
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 183 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 232
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 233 DYAEAHQKLSELG 245
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GLT D+V LSGGHT+G F G ++P
Sbjct: 161 GLTDQDIVALSGGHTIGAA-----HKEASGFEGPWTSNP--------------------- 194
Query: 239 TAVGMDPGSDLSFDTNYFKILT--QHKGLFQ--SDAALLTDKGARNFVN-VLLDSKRFFM 293
L FD +YF L + +GL Q SD ALL+D R V+ D FF
Sbjct: 195 ----------LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFA 244
Query: 294 EFGLSMKRMGAIG 306
++ + +++ +G
Sbjct: 245 DYAEAHQKLSELG 257
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 179 GLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNK 238
GL+ D+V LSGGHT+G ++R F G ++P
Sbjct: 149 GLSDQDIVALSGGHTIGAAH----KER-SGFEGPWTSNP--------------------- 182
Query: 239 TAVGMDPGSDLSFDTNYF-KILTQHK-GLFQ--SDAALLTDKGARNFV-NVLLDSKRFFM 293
L FD +YF ++LT K GL Q SD ALLTD R V D FF
Sbjct: 183 ----------LIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFA 232
Query: 294 EFGLSMKRMGAIG 306
++ + ++ +G
Sbjct: 233 DYAEAHLKLSELG 245
>pdb|3OLZ|A Chain A, Crystal Structure Of The Gluk3 (Glur7) Atd Dimer At 2.75
Angstrom Resolution
pdb|3OLZ|B Chain B, Crystal Structure Of The Gluk3 (Glur7) Atd Dimer At 2.75
Angstrom Resolution
Length = 398
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 43 NIVWKNAALNP--TLAAKLLRVHFHDCF---VRGCDASVL 77
NI+ +N L P TL + R+HFHD F + CD L
Sbjct: 34 NIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLAL 73
>pdb|4ER9|A Chain A, Crystal Structure Of Cytochrome B562 From Salmonella
Enterica Subsp. Enterica Serovar Typhimurium Str. 14028s
Length = 131
Score = 27.7 bits (60), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 77 LIDSTESNSGEKDALPNETLGGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFK 136
+++ T+S K AL D + +LE K P DS +
Sbjct: 41 VVEKTDSAPELKAALTKMRAAALDAQKATPPKLEDKAP--------------DSPEMKDF 86
Query: 137 RTLWEVLTGRRDGRISLASEAN 158
R +++L G+ DG + LA+E N
Sbjct: 87 RHGFDILVGQIDGALKLANEGN 108
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,668,706
Number of Sequences: 62578
Number of extensions: 399631
Number of successful extensions: 942
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 836
Number of HSP's gapped (non-prelim): 35
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)