Query 020635
Match_columns 323
No_of_seqs 179 out of 1499
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 03:57:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020635.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020635hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 4E-110 8E-115 794.8 26.0 298 21-323 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1E-102 3E-107 740.7 25.3 297 24-322 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 5.4E-73 1.2E-77 521.2 6.6 227 41-287 1-229 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 7.9E-70 1.7E-74 511.4 18.4 231 37-320 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 4.6E-67 1E-71 487.2 15.8 229 36-309 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.4E-65 2.9E-70 475.9 18.2 230 27-308 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 1E-64 2.2E-69 484.5 18.8 236 37-323 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 5.5E-63 1.2E-67 457.9 18.2 226 31-308 3-248 (251)
9 cd00314 plant_peroxidase_like 100.0 8.1E-59 1.7E-63 432.7 14.8 223 40-304 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.2E-54 2.7E-59 421.5 18.9 257 39-313 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 6.9E-52 1.5E-56 425.1 21.0 254 39-311 55-406 (716)
12 cd08201 plant_peroxidase_like_ 100.0 3.9E-51 8.4E-56 378.7 9.4 219 41-304 27-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 5.4E-48 1.2E-52 394.5 20.4 257 39-313 57-414 (726)
14 cd08200 catalase_peroxidase_2 100.0 1.1E-36 2.4E-41 285.5 15.1 219 43-306 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.6E-31 3.4E-36 275.2 14.2 219 41-307 430-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3.4E-31 7.4E-36 271.4 15.0 220 43-307 442-722 (726)
17 COG0376 KatG Catalase (peroxid 99.9 1.8E-26 4E-31 227.3 14.8 233 54-305 93-415 (730)
18 COG0376 KatG Catalase (peroxid 99.2 2.6E-10 5.7E-15 113.8 12.0 214 44-306 453-725 (730)
19 PF07172 GRP: Glycine rich pro 58.1 7.9 0.00017 31.1 2.2 14 1-14 1-14 (95)
20 PF11895 DUF3415: Domain of un 46.8 17 0.00037 28.3 2.3 18 291-308 3-20 (80)
21 COG3763 Uncharacterized protei 35.1 17 0.00037 27.6 0.7 28 40-67 24-51 (71)
22 COG0167 PyrD Dihydroorotate de 25.5 1.6E+02 0.0035 28.6 5.8 108 56-186 162-304 (310)
23 KOG4065 Uncharacterized conser 25.4 1.6E+02 0.0034 24.9 4.8 61 26-107 35-95 (144)
24 KOG0400 40S ribosomal protein 25.3 54 0.0012 28.0 2.1 33 166-198 31-64 (151)
25 PLN02826 dihydroorotate dehydr 23.9 1.6E+02 0.0034 29.8 5.5 79 56-134 263-370 (409)
26 KOG3803 Transcription factor c 23.7 51 0.0011 35.2 2.0 36 32-80 670-705 (968)
27 PF15240 Pro-rich: Proline-ric 23.0 50 0.0011 29.6 1.6 19 8-26 2-20 (179)
28 PRK01844 hypothetical protein; 22.8 40 0.00086 25.8 0.8 34 25-67 18-51 (72)
29 PF08782 c-SKI_SMAD_bind: c-SK 22.0 31 0.00068 27.8 0.1 15 63-78 4-18 (96)
30 PF06764 DUF1223: Protein of u 20.2 86 0.0019 28.5 2.6 25 32-65 11-35 (202)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=3.6e-110 Score=794.84 Aligned_cols=298 Identities=50% Similarity=0.863 Sum_probs=283.6
Q ss_pred CCCCCccCcccCCCchHHHHHHHHHHHHHHcCCcchhcccceeeccccccCCCceeeecCCCCCccccCCCCCCCCcchh
Q 020635 21 TGGELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTESNSGEKDALPNETLGGFD 100 (323)
Q Consensus 21 ~~~~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~l~g~~ 100 (323)
++++|+++||++|||++|+||++.|++++.+||+++|++|||+||||||+||||||||+++ .+||++++|.+|+||+
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~ 97 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYD 97 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHH
Confidence 4567999999999999999999999999999999999999999999999999999999964 3699999999999999
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCC
Q 020635 101 VIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGL 180 (323)
Q Consensus 101 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl 180 (323)
+|+.||++||++||++||||||||+||||||+++ |||.|+|++||||+++|.+++++ +||.|+.++++|++.|+++||
T Consensus 98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~-gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLT-NGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHhhCCCcccHHHHHHHHhhcccccc-CCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999 99999999999999999888775 899999999999999999999
Q ss_pred CccCcEeEeccccccccccccccccccccCCCC-CCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHH
Q 020635 181 TVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKG-DADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKIL 259 (323)
Q Consensus 181 ~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~-~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l 259 (323)
+.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|+..|++.||..+.....+++|+.||.+|||+||+||
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999999999999999875 4899999999999999999633333468899999999999999999
Q ss_pred hhCCccccchhhhcCChhHHHHHHHhhc-h----hHHHHHHHHHHHHhhcCCCcCCCCCcccccCccCC
Q 020635 260 TQHKGLFQSDAALLTDKGARNFVNVLLD-S----KRFFMEFGLSMKRMGAIGVLTGNSGEIRKKCNVIN 323 (323)
Q Consensus 260 ~~~~glL~SD~~L~~d~~t~~~V~~yA~-~----~~F~~~Fa~Am~Km~~l~v~tg~~GeiR~~C~~~n 323 (323)
++++|+|+|||+|++|++|+++|++||. + +.||++|++||+|||+|+|+||.+|||||+|+++|
T Consensus 256 l~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 256 KNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999997 5 49999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.3e-102 Score=740.75 Aligned_cols=297 Identities=54% Similarity=0.941 Sum_probs=287.1
Q ss_pred CCccCcccCCCchHHHHHHHHHHHHHHcCCcchhcccceeeccccccCCCceeeecCCCCCccccCCCCCCCCcchhHHH
Q 020635 24 ELRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTESNSGEKDALPNETLGGFDVIE 103 (323)
Q Consensus 24 ~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~l~g~~~I~ 103 (323)
||+++||++|||++|+||++.|++.+.++++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 59999999999999999999999999999999999999999999999999999999887777899999999999999999
Q ss_pred HHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcc
Q 020635 104 EVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVH 183 (323)
Q Consensus 104 ~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~ 183 (323)
.||++||+.||++||||||||||||+||+++ |||.|+|++||+|+.+|.+..+ ..||+|+.+++++++.|+++||+++
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~-GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLA-GGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceecc-CCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 9999999999999999999999999999999 9999999999999998887766 7899999999999999999999999
Q ss_pred CcEeEeccccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhCC
Q 020635 184 DLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHK 263 (323)
Q Consensus 184 dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~ 263 (323)
|||+|+||||||++||.+|.+|||+|+|++.+||+||+.|+..|++.||..+..++.+++|+.||.+|||+||++|+.++
T Consensus 159 d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 159 DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 99999999999999999999999999999889999999999999999997544556789999999999999999999999
Q ss_pred ccccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCcCCCCCcccccCccC
Q 020635 264 GLFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKCNVI 322 (323)
Q Consensus 264 glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~tg~~GeiR~~C~~~ 322 (323)
|+|+|||+|+.|++|+++|++||. |+.|+++|++||+||++|+|+||.+||||++|+++
T Consensus 239 glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999 99999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=5.4e-73 Score=521.19 Aligned_cols=227 Identities=46% Similarity=0.775 Sum_probs=209.1
Q ss_pred HHHHHHHHHHcCCcchhcccceeeccccc-cCCCceeeecCCCCCccccCCCCCCCCc-chhHHHHHHHHHHhhCCCCcc
Q 020635 41 VHNIVWKNAALNPTLAAKLLRVHFHDCFV-RGCDASVLIDSTESNSGEKDALPNETLG-GFDVIEEVKTELEKKCPGIVS 118 (323)
Q Consensus 41 V~~~v~~~~~~~~~~a~~llRL~FHDcfv-~GcDgSill~~~~~~~~E~~~~~N~~l~-g~~~I~~iK~~le~~cp~~VS 118 (323)
||+.|++++..+++++|+||||+|||||+ +|||||||+. ..|+++++|.+|+ |+++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999993 3699999999998 999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccCcEeEeccccccccc
Q 020635 119 CADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGGHTLGVGR 198 (323)
Q Consensus 119 cADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~h 198 (323)
|||||+||||+||+.+ |||.|+|++||+|+.++++.++ .+||.|+.++++|++.|+++|||++|||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~-GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELC-GGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHT-TGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccc-cccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccce
Confidence 9999999999999999 9999999999999999999877 7899999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhCCccccchhhhcCChhH
Q 020635 199 CRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHKGLFQSDAALLTDKGA 278 (323)
Q Consensus 199 c~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t 278 (323)
|.+|. ||| + .+||+||+.|+.. .| ..++. +.+++| ||.+|||+||++|++++|+|+|||+|++|++|
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~-~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t 220 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGD-NGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPET 220 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGC-TCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTH
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCcc-cccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHH
Confidence 99999 999 4 5699999999988 99 43333 378888 99999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 020635 279 RNFVNVLLD 287 (323)
Q Consensus 279 ~~~V~~yA~ 287 (323)
+++|++||.
T Consensus 221 ~~~V~~yA~ 229 (230)
T PF00141_consen 221 RPIVERYAQ 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999984
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=7.9e-70 Score=511.41 Aligned_cols=231 Identities=28% Similarity=0.399 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHcCCcchhcccceeecccc-------ccCCCceeeecCCCCCccccCCCCCCCC-cchhHHHHHHHH
Q 020635 37 AENIVHNIVWKNAALNPTLAAKLLRVHFHDCF-------VRGCDASVLIDSTESNSGEKDALPNETL-GGFDVIEEVKTE 108 (323)
Q Consensus 37 ~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~~~~N~~l-~g~~~I~~iK~~ 108 (323)
++ .+++.+ ..+.++|.++|.+|||+||||| ++||||||+++ .|+++++|.+| +||++|+.||++
T Consensus 14 ~~-~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~ 85 (289)
T PLN02608 14 IE-KARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAK 85 (289)
T ss_pred HH-HHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHH
Confidence 44 445566 4477899999999999999999 89999999985 49999999999 599999999998
Q ss_pred HHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccCcEeE
Q 020635 109 LEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVL 188 (323)
Q Consensus 109 le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL 188 (323)
+ ++|||||||+||||+||+++ |||.|+|++||+|++++++ +.+||+|+.+++++++.|+++||+++|||+|
T Consensus 86 ~-----~~VScADilalAardAV~~~-GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaL 156 (289)
T PLN02608 86 H-----PKITYADLYQLAGVVAVEVT-GGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVAL 156 (289)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhc-CCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhh
Confidence 7 48999999999999999999 9999999999999999864 3689999999999999999999999999999
Q ss_pred eccccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhC--Ccc-
Q 020635 189 SGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQH--KGL- 265 (323)
Q Consensus 189 sGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~--~gl- 265 (323)
+||||||++||. |+ +|.| | + + .||.+|||+||++++.+ +|+
T Consensus 157 sGAHTiG~ahc~----r~-g~~g-----~-------------------~------~-~Tp~~FDN~Yy~~ll~~~~~gll 200 (289)
T PLN02608 157 SGGHTLGRAHPE----RS-GFDG-----P-------------------W------T-KEPLKFDNSYFVELLKGESEGLL 200 (289)
T ss_pred cccccccccccc----CC-CCCC-----C-------------------C------C-CCCCccChHHHHHHHcCCcCCcc
Confidence 999999999994 55 3322 1 1 1 68999999999999999 788
Q ss_pred -ccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCcCCCCCcccccCc
Q 020635 266 -FQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKCN 320 (323)
Q Consensus 266 -L~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~tg~~GeiR~~C~ 320 (323)
|+|||+|+.|++|+++|++||. ++.|+++|++||+||++|+|+||.+||+.+.-+
T Consensus 201 ~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 201 KLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 7999999999999999999999 999999999999999999999999999987643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=4.6e-67 Score=487.21 Aligned_cols=229 Identities=23% Similarity=0.290 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHHHHcCCcchhcccceeeccccccCCCceeeecCC---CCCccccCCCCCCCC-cchhHHHHHHHHHHh
Q 020635 36 EAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDST---ESNSGEKDALPNETL-GGFDVIEEVKTELEK 111 (323)
Q Consensus 36 ~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~---~~~~~E~~~~~N~~l-~g~~~I~~iK~~le~ 111 (323)
..++||++.|++.+. +++++|++|||+|||||+ ||+|++++.. ..+.+|+++++|.+| +||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 999999999999999994 7777776432 223469999999999 8999999999986
Q ss_pred hCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccCcEeEecc
Q 020635 112 KCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSGG 191 (323)
Q Consensus 112 ~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 191 (323)
++||||||||||||+||+.+ |||.|+|++||+|+.++....++.+||.|+.+++++++.|+++|||++|||+|+||
T Consensus 86 ---~~VScADilalAar~Av~~~-GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---PDISYADLWQLAGVVAIEEM-GGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---CCCCHHHHHHHHHHHHHHHc-CCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 48999999999999999999 99999999999999999887777899999999999999999999999999999999
Q ss_pred ccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhCCc-------
Q 020635 192 HTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHKG------- 264 (323)
Q Consensus 192 HTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~g------- 264 (323)
||||++||.. ++|.|. + ..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~------------------------~-------~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP------------------------W-------TKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC------------------------C-------CCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 1 15899999999999999999
Q ss_pred -cccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCcC
Q 020635 265 -LFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVLT 309 (323)
Q Consensus 265 -lL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~t 309 (323)
+|+|||+|+.|++|+++|++||. ++.|+++|++||+||++|+|..
T Consensus 206 ~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 206 LMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred eechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999 9999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.4e-65 Score=475.93 Aligned_cols=230 Identities=27% Similarity=0.383 Sum_probs=206.9
Q ss_pred cCcccCC--CchHHHHHHHHHHHHHHcCCcchhcccceeec-----ccccc--CCCceeeecCCCCCccccCCCCCCCC-
Q 020635 27 KNFYEET--CPEAENIVHNIVWKNAALNPTLAAKLLRVHFH-----DCFVR--GCDASVLIDSTESNSGEKDALPNETL- 96 (323)
Q Consensus 27 ~~fY~~s--Cp~~e~iV~~~v~~~~~~~~~~a~~llRL~FH-----Dcfv~--GcDgSill~~~~~~~~E~~~~~N~~l- 96 (323)
.+||... |+.+++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.++ +|+++++|.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~------~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFD------AEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCcccccc------ccccCCCccCHH
Confidence 3567644 8899999999999977 889999999999999 88886 999999543 59999999999
Q ss_pred cchhHHHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHH
Q 020635 97 GGFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFE 176 (323)
Q Consensus 97 ~g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~ 176 (323)
+||++|+.||+++ ++||||||||||||+||+++ |||.|+|++||+|++++++ ++.||.|+.++++|++.|+
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~-GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~ 146 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVT-GGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFA 146 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhc-CCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHH
Confidence 7999999999988 58999999999999999999 9999999999999999875 3679999999999999999
Q ss_pred H-CCCCccCcEeEeccccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHH
Q 020635 177 N-NGLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNY 255 (323)
Q Consensus 177 ~-~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Y 255 (323)
+ +|||++|||+|+||||||++|| .|+ +|.|. + + .||.+|||+|
T Consensus 147 ~~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------~------~-~tp~~fDn~Y 190 (250)
T PLN02364 147 KQMGLSDKDIVALSGAHTLGRCHK----DRS-GFEGA------------------------W------T-SNPLIFDNSY 190 (250)
T ss_pred HhcCCCHHHheeeecceeeccccC----CCC-CCCCC------------------------C------C-CCCCccchHH
Confidence 7 5999999999999999999999 454 33220 1 1 6899999999
Q ss_pred HHHHhhC--Ccccc--chhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCc
Q 020635 256 FKILTQH--KGLFQ--SDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVL 308 (323)
Q Consensus 256 y~~l~~~--~glL~--SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~ 308 (323)
|++|+.+ +|+|. |||+|+.|++|+.+|++||. ++.|+++|++||+||++|++-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89865 99999999999999999999 999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1e-64 Score=484.53 Aligned_cols=236 Identities=22% Similarity=0.278 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcC---Ccchhcccceeeccccc------------cCCCceeeecCCCCCccccCCCCCCCCcchhH
Q 020635 37 AENIVHNIVWKNAALN---PTLAAKLLRVHFHDCFV------------RGCDASVLIDSTESNSGEKDALPNETLGGFDV 101 (323)
Q Consensus 37 ~e~iV~~~v~~~~~~~---~~~a~~llRL~FHDcfv------------~GcDgSill~~~~~~~~E~~~~~N~~l~g~~~ 101 (323)
+|..|++.+++.+..+ ...|+.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 4889999999999854 45677899999999996 899999999853 599999999998 99
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCC
Q 020635 102 IEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT 181 (323)
Q Consensus 102 I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~ 181 (323)
|+.||..+|+.| ||||||||||||+||+.++|||.|+|++||+|++++.+. +.||.|+.++++|++.|+++||+
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~---g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPD---GLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcc---cCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 999999999999999954499999999999999998754 57999999999999999999999
Q ss_pred ccCcEeEeccccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHh-
Q 020635 182 VHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILT- 260 (323)
Q Consensus 182 ~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~- 260 (323)
++|||+|+||||||++|. +||+++ ..++| .||.+|||+||+|++
T Consensus 164 ~~E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll~ 208 (328)
T cd00692 164 PDELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIETLL 208 (328)
T ss_pred HHHHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHHHH
Confidence 999999999999999982 367764 14577 699999999999987
Q ss_pred hCCc-------------------cccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCcCCCCCcccccCc
Q 020635 261 QHKG-------------------LFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVLTGNSGEIRKKCN 320 (323)
Q Consensus 261 ~~~g-------------------lL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~tg~~GeiR~~C~ 320 (323)
.+++ +|+||++|+.|++|+.+|++||. |++|+++|++||+||++|||. +..+.+|+
T Consensus 209 ~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs 284 (328)
T cd00692 209 KGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCS 284 (328)
T ss_pred cCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCc
Confidence 5555 49999999999999999999999 999999999999999999987 34788999
Q ss_pred cCC
Q 020635 321 VIN 323 (323)
Q Consensus 321 ~~n 323 (323)
.|+
T Consensus 285 ~v~ 287 (328)
T cd00692 285 DVI 287 (328)
T ss_pred ccC
Confidence 875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=5.5e-63 Score=457.89 Aligned_cols=226 Identities=26% Similarity=0.333 Sum_probs=200.0
Q ss_pred cCCCch-------HHHHHHHHHHHHHHcCCcchhcccceeeccccc-------cCCCceeeecCCCCCccccCCCCCCCC
Q 020635 31 EETCPE-------AENIVHNIVWKNAALNPTLAAKLLRVHFHDCFV-------RGCDASVLIDSTESNSGEKDALPNETL 96 (323)
Q Consensus 31 ~~sCp~-------~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~l 96 (323)
++.||. ..+-++..+.+.+ .+...+|.+|||+||||.+ |||||||++. .|+++++|.||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL 75 (251)
T PLN02879 3 KKSYPEVKEEYKKAVQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGL 75 (251)
T ss_pred cccCCCccHHHHHHHHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCCh
Confidence 356772 2334566777765 4578999999999999964 8999999874 49999999999
Q ss_pred c-chhHHHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHH
Q 020635 97 G-GFDVIEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSF 175 (323)
Q Consensus 97 ~-g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F 175 (323)
+ ++++|+.||+++ ++||||||||||||+||+.+ |||.|+|++||+|+.++++ +++||.|+.++++|++.|
T Consensus 76 ~~~~~~i~~iK~~~-----~~VScADilalAa~~AV~~~-GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F 146 (251)
T PLN02879 76 DIAVRLLDPIKELF-----PILSYADFYQLAGVVAVEIT-GGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVF 146 (251)
T ss_pred HHHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhc-CCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHH
Confidence 8 999999999987 58999999999999999999 9999999999999999865 468999999999999999
Q ss_pred HHCCCCccCcEeEeccccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHH
Q 020635 176 ENNGLTVHDLVVLSGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNY 255 (323)
Q Consensus 176 ~~~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Y 255 (323)
+++||+++||||||||||||++||. | ++|.|. | | .||.+|||+|
T Consensus 147 ~~~Gl~~~dlVALsGaHTiG~ah~~----r-~g~~g~------------------------~------d-~tp~~FDN~Y 190 (251)
T PLN02879 147 GRMGLNDKDIVALSGGHTLGRCHKE----R-SGFEGA------------------------W------T-PNPLIFDNSY 190 (251)
T ss_pred HHcCCCHHHHeeeeccccccccccc----c-ccCCCC------------------------C------C-CCccceeHHH
Confidence 9999999999999999999999995 4 233221 1 2 6899999999
Q ss_pred HHHHhhC--Ccc--ccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhcCCCc
Q 020635 256 FKILTQH--KGL--FQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGAIGVL 308 (323)
Q Consensus 256 y~~l~~~--~gl--L~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~l~v~ 308 (323)
|++|+.+ +|+ |+||++|+.|++|+++|++||. |++||++|++||+||++||+.
T Consensus 191 y~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 191 FKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 888 6899999999999999999999 999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=8.1e-59 Score=432.70 Aligned_cols=223 Identities=29% Similarity=0.405 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHcCCcchhcccceeecccccc--------CCCceeeecCCCCCccccCCCCCCCC-cchhHHHHHHHHHH
Q 020635 40 IVHNIVWKNAALNPTLAAKLLRVHFHDCFVR--------GCDASVLIDSTESNSGEKDALPNETL-GGFDVIEEVKTELE 110 (323)
Q Consensus 40 iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~--------GcDgSill~~~~~~~~E~~~~~N~~l-~g~~~I~~iK~~le 110 (323)
.|++.|++.+.+++.+++++|||+|||||+. ||||||++++ |+++++|.+| +++++|+.||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5788999999999999999999999999996 9999999974 9999999996 89999999999999
Q ss_pred hhCCCCccHHHHHHhhhhhhhhhcC-CCccceeecCccCCCCCc--ccccccCCCCCCCCHHHHHHHHHHCCCCccCcEe
Q 020635 111 KKCPGIVSCADIVALAARDSVSFQF-KRTLWEVLTGRRDGRISL--ASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVV 187 (323)
Q Consensus 111 ~~cp~~VScADilalAar~aV~~~~-GGP~~~v~~GR~D~~~s~--~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 187 (323)
. |++|||||||++|+++||+.++ |||.|+|++||+|++.+. ...+...+|.|+.+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 8999999999999999999986 899999999999999664 2233457888888999999999999999999999
Q ss_pred Ee-ccccc-cccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhCC--
Q 020635 188 LS-GGHTL-GVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHK-- 263 (323)
Q Consensus 188 Ls-GaHTi-G~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~-- 263 (323)
|+ ||||| |++||..+..|+ |+ +|+.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~------------------------~~----------~~~~tp~~fDN~yy~~l~~~~~~ 199 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG------------------------SG----------LWTSTPFTFDNAYFKNLLDMNWE 199 (255)
T ss_pred hccCCeeccCcccCCCCCccc------------------------CC----------CCCCCCCccchHHHHHHhcCCcc
Confidence 99 99999 999998777664 11 234799999999999999998
Q ss_pred --------------ccccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhhc
Q 020635 264 --------------GLFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMGA 304 (323)
Q Consensus 264 --------------glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~ 304 (323)
++|+||++|+.|++|+.+|++||. +++|+++|++||+||++
T Consensus 200 ~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 200 WRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999 99999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.2e-54 Score=421.53 Aligned_cols=257 Identities=17% Similarity=0.203 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHcC--------Ccchhcccceeeccccc-------cCCC-ceeeecCCCCCccccCCCCCCCC-cchhH
Q 020635 39 NIVHNIVWKNAALN--------PTLAAKLLRVHFHDCFV-------RGCD-ASVLIDSTESNSGEKDALPNETL-GGFDV 101 (323)
Q Consensus 39 ~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~l-~g~~~ 101 (323)
+.|++.+++.+... ...+|.+|||+|||+.+ +|++ |+|.++ .|++++.|.+| ++..+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 67889999888764 37999999999999986 7997 899887 49999999999 48899
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCccc--------------------------
Q 020635 102 IEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLAS-------------------------- 155 (323)
Q Consensus 102 I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 155 (323)
++.||++. |..||+||+|+||+..||+.+ |||.|++..||.|...+...
T Consensus 119 L~pik~k~----~~~iS~ADL~~LaG~~AiE~~-Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~ 193 (409)
T cd00649 119 LWPIKQKY----GNKISWADLMILAGNVALESM-GFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA 193 (409)
T ss_pred HHHHHHHc----CCCccHHHHHHHHHHHHHHHc-CCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence 99999976 457999999999999999999 99999999999999764320
Q ss_pred -----------ccccCCCCCCCCHHHHHHHHHHCCCCccCcEeE-eccccccccccccccccccccCCCCCCCCCCCHHH
Q 020635 156 -----------EANRDMPSPFFNFSSLQQSFENNGLTVHDLVVL-SGGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTY 223 (323)
Q Consensus 156 -----------~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~ 223 (323)
+....||+|..++.+|++.|.+||||++||||| +||||||++||..|.+||. +||.+++.|
T Consensus 194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~ 266 (409)
T cd00649 194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIE 266 (409)
T ss_pred hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHHH
Confidence 111269999999999999999999999999999 5999999999999999982 599999999
Q ss_pred HHHHh--hcCCCCCC-CCcccccC---CCCCcccchHHHHHHhh------------------------------------
Q 020635 224 AAFLR--TKCRNVED-NKTAVGMD---PGSDLSFDTNYFKILTQ------------------------------------ 261 (323)
Q Consensus 224 ~~~L~--~~Cp~~~~-~~~~~~~D---~~tp~~FDN~Yy~~l~~------------------------------------ 261 (323)
+..|. .+||.+.+ ++....+| +.||++|||+||++|++
T Consensus 267 ~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~ 346 (409)
T cd00649 267 QQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKH 346 (409)
T ss_pred HHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCcccccccc
Confidence 99995 89997432 33456788 47999999999999998
Q ss_pred CCccccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHh--hcCCCcCCCCC
Q 020635 262 HKGLFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRM--GAIGVLTGNSG 313 (323)
Q Consensus 262 ~~glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km--~~l~v~tg~~G 313 (323)
+.++|+||++|+.|++|+++|++||. +++||++|++||+|| +.+|+++--.|
T Consensus 347 ~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 347 APMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 56899999999999999999999999 999999999999999 69999986655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=6.9e-52 Score=425.08 Aligned_cols=254 Identities=18% Similarity=0.202 Sum_probs=221.8
Q ss_pred HHHHHHHHHHHHcC--------Ccchhcccceeeccccc-------cCC-CceeeecCCCCCccccCCCCCCCC-cchhH
Q 020635 39 NIVHNIVWKNAALN--------PTLAAKLLRVHFHDCFV-------RGC-DASVLIDSTESNSGEKDALPNETL-GGFDV 101 (323)
Q Consensus 39 ~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv-------~Gc-DgSill~~~~~~~~E~~~~~N~~l-~g~~~ 101 (323)
+.|++.+++.+... ...+|-+|||+||++.+ ||| .|+|.+. .|++++.|.+| +++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 46889999988764 36899999999999986 788 5899887 48999999999 48889
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCc----------------------------
Q 020635 102 IEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISL---------------------------- 153 (323)
Q Consensus 102 I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~---------------------------- 153 (323)
++.||+ .||++|||||||+||+++||+.+ |||.|+|.+||+|+..+.
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~-Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESM-GLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHh-CCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 998887 58999999999999999999999 999999999999994332
Q ss_pred ---------ccccccCCCCCCCCHHHHHHHHHHCCCCccCcEeEe-ccccccccccccccccccccCCCCCCCCCCCHHH
Q 020635 154 ---------ASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLS-GGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTY 223 (323)
Q Consensus 154 ---------~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~ 223 (323)
++. ...+|.|..++++|++.|.+||||++|||||+ ||||||++||.+|.+|| .+||++++.|
T Consensus 204 ~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~ 275 (716)
T TIGR00198 204 TEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIE 275 (716)
T ss_pred hhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-------CCCCCcCHHH
Confidence 111 12699999999999999999999999999995 99999999999999998 2799999999
Q ss_pred HHHHhhcCCCCC---CCCcccccC---CCCCcccchHHHHHHhhC----------------------------------C
Q 020635 224 AAFLRTKCRNVE---DNKTAVGMD---PGSDLSFDTNYFKILTQH----------------------------------K 263 (323)
Q Consensus 224 ~~~L~~~Cp~~~---~~~~~~~~D---~~tp~~FDN~Yy~~l~~~----------------------------------~ 263 (323)
++.|+.+||.+. .++..+.+| +.||.+|||+||+||+.. .
T Consensus 276 ~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~ 355 (716)
T TIGR00198 276 EQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNP 355 (716)
T ss_pred HHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccccccccccc
Confidence 999999998532 222356787 579999999999999975 6
Q ss_pred ccccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHhh--cCCCcCCC
Q 020635 264 GLFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRMG--AIGVLTGN 311 (323)
Q Consensus 264 glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~--~l~v~tg~ 311 (323)
++|+||++|..|++|+++|++||. ++.|+++|++||+||+ .+|++.--
T Consensus 356 ~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y 406 (716)
T TIGR00198 356 IMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRY 406 (716)
T ss_pred CccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhh
Confidence 899999999999999999999999 9999999999999998 57766543
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=3.9e-51 Score=378.71 Aligned_cols=219 Identities=23% Similarity=0.247 Sum_probs=182.1
Q ss_pred HHHHHHHHHHcCCcchhcccceeecccc-------ccCCCceeeecCCCCCccccC-CCCCCCCcchhHHHHHHHHHHhh
Q 020635 41 VHNIVWKNAALNPTLAAKLLRVHFHDCF-------VRGCDASVLIDSTESNSGEKD-ALPNETLGGFDVIEEVKTELEKK 112 (323)
Q Consensus 41 V~~~v~~~~~~~~~~a~~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~-~~~N~~l~g~~~I~~iK~~le~~ 112 (323)
|...-..+...+++++|++|||+||||| ++||||||+++.. .+|+. .+.|.+|++|+.|+.+
T Consensus 27 v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~------- 96 (264)
T cd08201 27 VTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP------- 96 (264)
T ss_pred cccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC-------
Confidence 3333344556889999999999999999 8999999999842 36877 5667789999988654
Q ss_pred CCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccCcEeEec-c
Q 020635 113 CPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLSG-G 191 (323)
Q Consensus 113 cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-a 191 (323)
+||||||||||||+||+.+ |||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++|||+||| |
T Consensus 97 ---~VScADiialAa~~AV~~~-GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsgga 168 (264)
T cd08201 97 ---RSSMADLIAMGVVTSVASC-GGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACG 168 (264)
T ss_pred ---ccCHHHHHHHHHHHHHHHc-CCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCC
Confidence 6999999999999999999 99999999999999998775 4999999999999999999999999999995 9
Q ss_pred ccccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccchHHHHHHhhCCc-------
Q 020635 192 HTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFDTNYFKILTQHKG------- 264 (323)
Q Consensus 192 HTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~g------- 264 (323)
||||++||..|.++.- |.. ..+...++| .||.+|||+||.+++.+..
T Consensus 169 HTiG~ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~ 222 (264)
T cd08201 169 HTLGGVHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVG 222 (264)
T ss_pred eeeeecccccchhhcC---------Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeec
Confidence 9999999998877651 100 001234567 7999999999999998742
Q ss_pred ---cccchhhhcCChhHHHHHHHhhchhHHHHHHHHHHHHhhc
Q 020635 265 ---LFQSDAALLTDKGARNFVNVLLDSKRFFMEFGLSMKRMGA 304 (323)
Q Consensus 265 ---lL~SD~~L~~d~~t~~~V~~yA~~~~F~~~Fa~Am~Km~~ 304 (323)
.+.||..+++.+.-.. ++..|++..|.+.++..+.||.+
T Consensus 223 ~~~~~~sd~r~f~~d~n~t-~~~l~~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 223 PNNTTNSDLRIFSSDGNVT-MNELASPDTFQKTCADILQRMID 264 (264)
T ss_pred CCCCccchhhheecCccHH-HHHhcChHHHHHHHHHHHHHHhC
Confidence 4689999997654443 57788888899999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=5.4e-48 Score=394.48 Aligned_cols=257 Identities=16% Similarity=0.208 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHcC--------Ccchhcccceeeccccc-------cCCC-ceeeecCCCCCccccCCCCCCCC-cchhH
Q 020635 39 NIVHNIVWKNAALN--------PTLAAKLLRVHFHDCFV-------RGCD-ASVLIDSTESNSGEKDALPNETL-GGFDV 101 (323)
Q Consensus 39 ~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~l-~g~~~ 101 (323)
+.|++.+.+.+... ...+|-+|||+||++.+ +||+ |+|.+. .|.+++.|.+| ++..+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~~ 130 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARRL 130 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHHH
Confidence 56888999888764 36899999999999986 7996 899886 48999999999 48899
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHhhhhhhhhhcCCCccceeecCccCCCCCccc--------------------------
Q 020635 102 IEEVKTELEKKCPGIVSCADIVALAARDSVSFQFKRTLWEVLTGRRDGRISLAS-------------------------- 155 (323)
Q Consensus 102 I~~iK~~le~~cp~~VScADilalAar~aV~~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 155 (323)
++.||.+. |..||+||+|+||+..||+.+ |||.|++..||.|...+...
T Consensus 131 L~pik~ky----~~~iS~ADLi~LaG~vAiE~~-Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 131 LWPIKQKY----GNKISWADLMILAGNVALESM-GFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHh----CCCccHHHHHHHHHHHHHHHc-CCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 99999986 457999999999999999999 99999999999998654321
Q ss_pred ------------ccccCCCCCCCCHHHHHHHHHHCCCCccCcEeEe-ccccccccccccccccccccCCCCCCCCCCCHH
Q 020635 156 ------------EANRDMPSPFFNFSSLQQSFENNGLTVHDLVVLS-GGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPT 222 (323)
Q Consensus 156 ------------~a~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~ 222 (323)
+-...+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|| .+||.+++.
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~~ 278 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAPI 278 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc-------CCCCCcCHH
Confidence 0012379999999999999999999999999995 99999999999999998 369999999
Q ss_pred HHHHHh--hcCCCCC-CCCcccccC---CCCCcccchHHHHHHhhC----------------------------------
Q 020635 223 YAAFLR--TKCRNVE-DNKTAVGMD---PGSDLSFDTNYFKILTQH---------------------------------- 262 (323)
Q Consensus 223 ~~~~L~--~~Cp~~~-~~~~~~~~D---~~tp~~FDN~Yy~~l~~~---------------------------------- 262 (323)
+++.|. +.||.+. .++.+..+| ..||++|||+||++|+.+
T Consensus 279 ~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~ 358 (726)
T PRK15061 279 EEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKK 358 (726)
T ss_pred HHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccc
Confidence 999984 8999743 233456788 579999999999999985
Q ss_pred --CccccchhhhcCChhHHHHHHHhhc-hhHHHHHHHHHHHHh--hcCCCcCCCCC
Q 020635 263 --KGLFQSDAALLTDKGARNFVNVLLD-SKRFFMEFGLSMKRM--GAIGVLTGNSG 313 (323)
Q Consensus 263 --~glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km--~~l~v~tg~~G 313 (323)
.++|+||++|..||+++++|++||. +++|+++|++||+|| ..+|+++---|
T Consensus 359 ~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 359 HAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred cCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 5899999999999999999999999 999999999999999 55777664433
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.1e-36 Score=285.55 Aligned_cols=219 Identities=17% Similarity=0.185 Sum_probs=177.4
Q ss_pred HHHHHHHHcCCcchhcccceeeccccc-------cCCCce-eeecCCCCCccccCCCCCCC--C-cchhHHHHHHHHHHh
Q 020635 43 NIVWKNAALNPTLAAKLLRVHFHDCFV-------RGCDAS-VLIDSTESNSGEKDALPNET--L-GGFDVIEEVKTELEK 111 (323)
Q Consensus 43 ~~v~~~~~~~~~~a~~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~--l-~g~~~I~~iK~~le~ 111 (323)
+.+++.+....-.++.|+||+||++.+ ||++|+ |.|. .|++++.|.+ | +.+.+++.||.+...
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567777777778899999999999986 799999 7776 4999999998 8 488999999998842
Q ss_pred h-CC-CCccHHHHHHhhhhhhhhhcCCC-----ccceeecCccCCCCCccccc--ccCCCCCC------------CCHHH
Q 020635 112 K-CP-GIVSCADIVALAARDSVSFQFKR-----TLWEVLTGRRDGRISLASEA--NRDMPSPF------------FNFSS 170 (323)
Q Consensus 112 ~-cp-~~VScADilalAar~aV~~~~GG-----P~~~v~~GR~D~~~s~~~~a--~~~lP~p~------------~~~~~ 170 (323)
. -+ ..||+||+|+||+..||+.+ || |.+++.+||.|.+.+..... ...+|.+. .+.+.
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~a-gg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKA-AKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHH-HhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence 1 11 26999999999999999999 99 99999999999987543210 11234332 23577
Q ss_pred HHHHHHHCCCCccCcEeEeccc-cccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCc
Q 020635 171 LQQSFENNGLTVHDLVVLSGGH-TLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDL 249 (323)
Q Consensus 171 l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 249 (323)
|++.|.++|||++|||||+||| ++|..|..+ +.| .|+ .+|.
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s-------~~G------------------------~wT-------~~p~ 211 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHG------------------------VFT-------DRPG 211 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CCC------------------------CCc-------CCCC
Confidence 9999999999999999999998 699877421 111 133 6899
Q ss_pred ccchHHHHHHhhCC--------------------c-----cccchhhhcCChhHHHHHHHhhc---hhHHHHHHHHHHHH
Q 020635 250 SFDTNYFKILTQHK--------------------G-----LFQSDAALLTDKGARNFVNVLLD---SKRFFMEFGLSMKR 301 (323)
Q Consensus 250 ~FDN~Yy~~l~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~---~~~F~~~Fa~Am~K 301 (323)
+|||.||+||+... | .+.+|..|.+|++.|++|+.||. ++.||++|++||.|
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~K 291 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTK 291 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 99999999999520 1 16789999999999999999998 78999999999999
Q ss_pred hhcCC
Q 020635 302 MGAIG 306 (323)
Q Consensus 302 m~~l~ 306 (323)
|.++.
T Consensus 292 lmeld 296 (297)
T cd08200 292 VMNLD 296 (297)
T ss_pred HHhcC
Confidence 99874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=99.97 E-value=1.6e-31 Score=275.16 Aligned_cols=219 Identities=18% Similarity=0.208 Sum_probs=172.9
Q ss_pred HHHHHHH---HHHcCCcchhcccceeeccccc-------cCCCce-eeecCCCCCccccCCCCC--CCC-cchhHHHHHH
Q 020635 41 VHNIVWK---NAALNPTLAAKLLRVHFHDCFV-------RGCDAS-VLIDSTESNSGEKDALPN--ETL-GGFDVIEEVK 106 (323)
Q Consensus 41 V~~~v~~---~~~~~~~~a~~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N--~~l-~g~~~I~~iK 106 (323)
|++.|.. .+....-..+.|+|++||++.+ ||++|+ |.|. .|++++.| .+| +.+.+++.||
T Consensus 430 v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~Ik 503 (716)
T TIGR00198 430 SEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKIQ 503 (716)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHHH
Confidence 3555444 3445566789999999999986 799999 8886 49999999 688 5889999999
Q ss_pred HHHHhhCCCCccHHHHHHhhhhhhhhhcC--CCc--cceeecCccCCCCCcccccccCCC---C------------CCCC
Q 020635 107 TELEKKCPGIVSCADIVALAARDSVSFQF--KRT--LWEVLTGRRDGRISLASEANRDMP---S------------PFFN 167 (323)
Q Consensus 107 ~~le~~cp~~VScADilalAar~aV~~~~--GGP--~~~v~~GR~D~~~s~~~~a~~~lP---~------------p~~~ 167 (323)
++... ..||.||+|+||+..||+.+. ||| .+++.+||.|.+..... ++...| . ....
T Consensus 504 ~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~~ 579 (716)
T TIGR00198 504 AEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVTP 579 (716)
T ss_pred HHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCCH
Confidence 98742 279999999999999999984 687 57889999999876421 222222 1 1223
Q ss_pred HHHHHHHHHHCCCCccCcEeEeccc-cccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCC
Q 020635 168 FSSLQQSFENNGLTVHDLVVLSGGH-TLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPG 246 (323)
Q Consensus 168 ~~~l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~ 246 (323)
.+.|++.|..+|||++|||||+||| ++|..|..+ +.| .++ .
T Consensus 580 ~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s-------~~G------------------------~~T-------~ 621 (716)
T TIGR00198 580 EELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS-------KHG------------------------VFT-------D 621 (716)
T ss_pred HHHHHHHHHhCCCChHHHHheecchhhccccCCCC-------CCC------------------------CCc-------C
Confidence 5668999999999999999999995 999988532 111 132 5
Q ss_pred CCcccchHHHHHHhhCC--------------------c---cc--cchhhhcCChhHHHHHHHhhc-h--hHHHHHHHHH
Q 020635 247 SDLSFDTNYFKILTQHK--------------------G---LF--QSDAALLTDKGARNFVNVLLD-S--KRFFMEFGLS 298 (323)
Q Consensus 247 tp~~FDN~Yy~~l~~~~--------------------g---lL--~SD~~L~~d~~t~~~V~~yA~-~--~~F~~~Fa~A 298 (323)
+|.+|||.||+||+... | ++ .+|..|.+|++.|++|+.||+ + +.||+||++|
T Consensus 622 ~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~A 701 (716)
T TIGR00198 622 RVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAA 701 (716)
T ss_pred CCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHH
Confidence 89999999999999721 2 22 679999999999999999999 5 8999999999
Q ss_pred HHHhhcCCC
Q 020635 299 MKRMGAIGV 307 (323)
Q Consensus 299 m~Km~~l~v 307 (323)
|.|+.+++-
T Consensus 702 w~Klm~ldr 710 (716)
T TIGR00198 702 WTKVMNLDR 710 (716)
T ss_pred HHHHHhCCC
Confidence 999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=99.97 E-value=3.4e-31 Score=271.40 Aligned_cols=220 Identities=17% Similarity=0.164 Sum_probs=177.0
Q ss_pred HHHHHHHHcCCcchhcccceeeccccc-------cCCCce-eeecCCCCCccccCCCCCC--CC-cchhHHHHHHHHHHh
Q 020635 43 NIVWKNAALNPTLAAKLLRVHFHDCFV-------RGCDAS-VLIDSTESNSGEKDALPNE--TL-GGFDVIEEVKTELEK 111 (323)
Q Consensus 43 ~~v~~~~~~~~~~a~~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~l-~g~~~I~~iK~~le~ 111 (323)
..+++.+....-..+.|+|++||++.+ ||++|+ |.|. .|++++.|. +| +.+.+++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 456666666667799999999999986 799999 8887 499999999 88 488999999999864
Q ss_pred hC--CCCccHHHHHHhhhhhhhhhcC--CC--ccceeecCccCCCCCcccccc---cCCCCCC------------CCHHH
Q 020635 112 KC--PGIVSCADIVALAARDSVSFQF--KR--TLWEVLTGRRDGRISLASEAN---RDMPSPF------------FNFSS 170 (323)
Q Consensus 112 ~c--p~~VScADilalAar~aV~~~~--GG--P~~~v~~GR~D~~~s~~~~a~---~~lP~p~------------~~~~~ 170 (323)
.- ...||.||+|+||+..||+.+. || |.+++.+||.|.+..... ++ ..+|... ...+.
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHH
Confidence 32 1369999999999999999982 37 999999999999875332 21 2346432 23477
Q ss_pred HHHHHHHCCCCccCcEeEeccc-cccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCc
Q 020635 171 LQQSFENNGLTVHDLVVLSGGH-TLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDL 249 (323)
Q Consensus 171 l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 249 (323)
|++.|.++|||+.|||||+||| ++|..|-.+ +. +.++ .+|.
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-------~~------------------------G~~T-------~~p~ 636 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KH------------------------GVFT-------DRPG 636 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CC------------------------CCCc-------CCCC
Confidence 9999999999999999999997 788876321 00 1132 5899
Q ss_pred ccchHHHHHHhhCC--------------------c---c--ccchhhhcCChhHHHHHHHhhc---hhHHHHHHHHHHHH
Q 020635 250 SFDTNYFKILTQHK--------------------G---L--FQSDAALLTDKGARNFVNVLLD---SKRFFMEFGLSMKR 301 (323)
Q Consensus 250 ~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~---~~~F~~~Fa~Am~K 301 (323)
+|||.||+||+... | + +.+|..|.+|++.|++|+.||. +++||+||++||.|
T Consensus 637 ~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~K 716 (726)
T PRK15061 637 VLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTK 716 (726)
T ss_pred ccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 99999999999521 1 1 4789999999999999999997 78999999999999
Q ss_pred hhcCCC
Q 020635 302 MGAIGV 307 (323)
Q Consensus 302 m~~l~v 307 (323)
+.+++-
T Consensus 717 vmeldr 722 (726)
T PRK15061 717 VMNLDR 722 (726)
T ss_pred HHhCCC
Confidence 999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.8e-26 Score=227.34 Aligned_cols=233 Identities=15% Similarity=0.209 Sum_probs=180.8
Q ss_pred cchhcccceeeccccc-------cCC-CceeeecCCCCCccccCCCCCCCC-cchhHHHHHHHHHHhhCCCCccHHHHHH
Q 020635 54 TLAAKLLRVHFHDCFV-------RGC-DASVLIDSTESNSGEKDALPNETL-GGFDVIEEVKTELEKKCPGIVSCADIVA 124 (323)
Q Consensus 54 ~~a~~llRL~FHDcfv-------~Gc-DgSill~~~~~~~~E~~~~~N~~l-~g~~~I~~iK~~le~~cp~~VScADila 124 (323)
...|-+|||+||-+.+ +|. .|...+ ..+.++|.|.+| +++.++..||.+. +..+|+||+|.
T Consensus 93 hYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRF------aPlnSWPDN~nLDKarRLLWPIKkKY----G~kiSWaDL~i 162 (730)
T COG0376 93 HYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNANLDKARRLLWPIKKKY----GRKISWADLII 162 (730)
T ss_pred ccccceeeeeecccCceecccCCCCCCCCceec------ccccCCCcccchHHHHHHhhhHhHhh----cccccHhHhhh
Confidence 3789999999999986 233 333333 347788999999 5999999999987 46899999999
Q ss_pred hhhhhhhhhcCCCccceeecCccCCCCCcc--------------------------------------cccccCCCCCCC
Q 020635 125 LAARDSVSFQFKRTLWEVLTGRRDGRISLA--------------------------------------SEANRDMPSPFF 166 (323)
Q Consensus 125 lAar~aV~~~~GGP~~~v~~GR~D~~~s~~--------------------------------------~~a~~~lP~p~~ 166 (323)
||+..|++.+ |++++.+..||.|-..+.. +. ++..|+|..
T Consensus 163 LaGnvAlEsM-GfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVNPEG-png~PDpl~ 240 (730)
T COG0376 163 LAGNVALESM-GFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVNPEG-PNGNPDPLA 240 (730)
T ss_pred hhchhhhhhc-CCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeCCCC-CCCCCChhh
Confidence 9999999999 9999999999999877654 22 245788999
Q ss_pred CHHHHHHHHHHCCCCccCcEeEe-ccccccccccccccccccccCCCCCCCCCCCHHHHHH--HhhcCCCCCC-CCcccc
Q 020635 167 NFSSLQQSFENNGLTVHDLVVLS-GGHTLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAF--LRTKCRNVED-NKTAVG 242 (323)
Q Consensus 167 ~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~--L~~~Cp~~~~-~~~~~~ 242 (323)
+..+++..|++|+++.+|.|||+ ||||+|++|-..-.+-+ +++|.--+--.+- ++..|-.+.+ ++.+..
T Consensus 241 aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlGW~~~~g~G~G~dtitsG 313 (730)
T COG0376 241 AARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLGWANTYGSGKGPDTITSG 313 (730)
T ss_pred hHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchhhhccccccccCCCcCccccccc
Confidence 99999999999999999999998 69999999965422221 2445322211221 2334433222 222222
Q ss_pred cC---CCCCcccchHHHHHHhhCC-----------------------------------ccccchhhhcCChhHHHHHHH
Q 020635 243 MD---PGSDLSFDTNYFKILTQHK-----------------------------------GLFQSDAALLTDKGARNFVNV 284 (323)
Q Consensus 243 ~D---~~tp~~FDN~Yy~~l~~~~-----------------------------------glL~SD~~L~~d~~t~~~V~~ 284 (323)
+. ..||++|||+||.+|+... .+|.+|.+|.-||..+++.++
T Consensus 314 lE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y~kIs~r 393 (730)
T COG0376 314 LEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEYEKISRR 393 (730)
T ss_pred ccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHHHHHHHH
Confidence 22 2689999999999998631 479999999999999999999
Q ss_pred hhc-hhHHHHHHHHHHHHhhcC
Q 020635 285 LLD-SKRFFMEFGLSMKRMGAI 305 (323)
Q Consensus 285 yA~-~~~F~~~Fa~Am~Km~~l 305 (323)
|.. ++.|.+.|++||.||..-
T Consensus 394 f~e~pd~F~~~FArAWfKLtHR 415 (730)
T COG0376 394 FLEDPDEFADAFARAWFKLTHR 415 (730)
T ss_pred HHhCHHHHHHHHHHHHHHHhhc
Confidence 999 999999999999999764
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.15 E-value=2.6e-10 Score=113.83 Aligned_cols=214 Identities=18% Similarity=0.226 Sum_probs=146.0
Q ss_pred HHHHHHHcCCcchhcccceeeccccc-------cCCCce-eeecCCCCCccccCCCCCC--CC-cchhHHHHHHHHHHhh
Q 020635 44 IVWKNAALNPTLAAKLLRVHFHDCFV-------RGCDAS-VLIDSTESNSGEKDALPNE--TL-GGFDVIEEVKTELEKK 112 (323)
Q Consensus 44 ~v~~~~~~~~~~a~~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~l-~g~~~I~~iK~~le~~ 112 (323)
.++..+....-....|+-.+|--+-+ +|.+|. |.|. ..++++.|. -| +-+.+++.|.+...
T Consensus 453 ~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn-- 524 (730)
T COG0376 453 ALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN-- 524 (730)
T ss_pred HHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc--
Confidence 44555555555566777777766644 577765 4454 378899996 34 46788888888775
Q ss_pred CCCCccHHHHHHhhhhhhhhhcC--CCccc--eeecCccCCCCCcccccccC--C-C------------CCCCCHHHHHH
Q 020635 113 CPGIVSCADIVALAARDSVSFQF--KRTLW--EVLTGRRDGRISLASEANRD--M-P------------SPFFNFSSLQQ 173 (323)
Q Consensus 113 cp~~VScADilalAar~aV~~~~--GGP~~--~v~~GR~D~~~s~~~~a~~~--l-P------------~p~~~~~~l~~ 173 (323)
..||.||+|.|++..+|+.+. +|-.+ |+..||.|........ +.. | | ....+-.-|++
T Consensus 525 --kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv-~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 --KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDV-ESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred --CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcch-hhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 479999999999999998752 56554 5668999987653321 110 0 1 11122344778
Q ss_pred HHHHCCCCccCcEeEeccc-cccccccccccccccccCCCCCCCCCCCHHHHHHHhhcCCCCCCCCcccccCCCCCcccc
Q 020635 174 SFENNGLTVHDLVVLSGGH-TLGVGRCRFFRDRLYNFTGKGDADPSLNPTYAAFLRTKCRNVEDNKTAVGMDPGSDLSFD 252 (323)
Q Consensus 174 ~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FD 252 (323)
.-+-.+||..||++|.||- -+|. ||.|+. ..|.- ..|..+.
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~-----------n~g~s~-------------------------~GVfT--~~pg~Lt 643 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGA-----------NYGGSK-------------------------HGVFT--DRPGVLT 643 (730)
T ss_pred HHHHhccCCccceEEEcceEeecc-----------CCCCCc-------------------------cceec--cCccccc
Confidence 8888899999999999876 3443 222210 11222 2566777
Q ss_pred hHHHHHHhhCC--------------------cc-----ccchhhhcCChhHHHHHHHhhc---hhHHHHHHHHHHHHhhc
Q 020635 253 TNYFKILTQHK--------------------GL-----FQSDAALLTDKGARNFVNVLLD---SKRFFMEFGLSMKRMGA 304 (323)
Q Consensus 253 N~Yy~~l~~~~--------------------gl-----L~SD~~L~~d~~t~~~V~~yA~---~~~F~~~Fa~Am~Km~~ 304 (323)
|.||.||+.-. |- -..|..+-+++..|.+.+-||. ++.|.+||+.||.|+.+
T Consensus 644 ndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn 723 (730)
T COG0376 644 NDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMN 723 (730)
T ss_pred chhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhc
Confidence 77777777521 21 2467777788999999999997 89999999999999988
Q ss_pred CC
Q 020635 305 IG 306 (323)
Q Consensus 305 l~ 306 (323)
+.
T Consensus 724 ~D 725 (730)
T COG0376 724 LD 725 (730)
T ss_pred cc
Confidence 75
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=58.11 E-value=7.9 Score=31.09 Aligned_cols=14 Identities=29% Similarity=0.401 Sum_probs=7.9
Q ss_pred CcchhHHHHHHHHH
Q 020635 1 MKASSIFFLISLVA 14 (323)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (323)
|+++.++|+.++|+
T Consensus 1 MaSK~~llL~l~LA 14 (95)
T PF07172_consen 1 MASKAFLLLGLLLA 14 (95)
T ss_pred CchhHHHHHHHHHH
Confidence 88777555433333
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=46.84 E-value=17 Score=28.31 Aligned_cols=18 Identities=17% Similarity=0.313 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhcCCCc
Q 020635 291 FFMEFGLSMKRMGAIGVL 308 (323)
Q Consensus 291 F~~~Fa~Am~Km~~l~v~ 308 (323)
....|..||.||+.||..
T Consensus 3 m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 567899999999999864
No 21
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.05 E-value=17 Score=27.63 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCcchhcccceeeccc
Q 020635 40 IVHNIVWKNAALNPTLAAKLLRVHFHDC 67 (323)
Q Consensus 40 iV~~~v~~~~~~~~~~a~~llRL~FHDc 67 (323)
|.|+.+++.++++|.+-...+|+.+---
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8899999999999999999999987644
No 22
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
Probab=25.51 E-value=1.6e+02 Score=28.62 Aligned_cols=108 Identities=24% Similarity=0.326 Sum_probs=67.6
Q ss_pred hhccccee--ecccc-------ccCCCceeeecCCCCCc-c--ccC--CCCCC--CCc-------chhHHHHHHHHHHhh
Q 020635 56 AAKLLRVH--FHDCF-------VRGCDASVLIDSTESNS-G--EKD--ALPNE--TLG-------GFDVIEEVKTELEKK 112 (323)
Q Consensus 56 a~~llRL~--FHDcf-------v~GcDgSill~~~~~~~-~--E~~--~~~N~--~l~-------g~~~I~~iK~~le~~ 112 (323)
.|-++.|. +.|.- -.|-||=++++.+.... . |.. ...|. ||. ++++|.++...++..
T Consensus 162 ~Pv~vKl~P~~~di~~iA~~~~~~g~Dgl~~~NT~~~~~~id~~~~~~~~~~~~GGLSG~~ikp~al~~v~~l~~~~~~~ 241 (310)
T COG0167 162 VPVFVKLAPNITDIDEIAKAAEEAGADGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPIALRVVAELYKRLGGD 241 (310)
T ss_pred CceEEEeCCCHHHHHHHHHHHHHcCCcEEEEEeeccccccccccccccccCcCCCCcCcccchHHHHHHHHHHHHhcCCC
Confidence 66666666 44431 26999999988654211 1 111 12232 552 678888999988876
Q ss_pred CC-----CCccHHHHHH--hhhhhhhhhcC----CCccceeecCccCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCC
Q 020635 113 CP-----GIVSCADIVA--LAARDSVSFQF----KRTLWEVLTGRRDGRISLASEANRDMPSPFFNFSSLQQSFENNGLT 181 (323)
Q Consensus 113 cp-----~~VScADila--lAar~aV~~~~----GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~ 181 (323)
+| |+-|+-|.+- +|+..+|+..+ .||.+- ..=.++|.++..++|++
T Consensus 242 ipIIGvGGI~s~~DA~E~i~aGA~~vQv~Tal~~~Gp~i~-----------------------~~I~~~l~~~l~~~g~~ 298 (310)
T COG0167 242 IPIIGVGGIETGEDALEFILAGASAVQVGTALIYKGPGIV-----------------------KEIIKGLARWLEEKGFE 298 (310)
T ss_pred CcEEEecCcCcHHHHHHHHHcCCchheeeeeeeeeCchHH-----------------------HHHHHHHHHHHHHcCCC
Confidence 66 5678888875 57788888762 233321 01135677788888985
Q ss_pred -ccCcE
Q 020635 182 -VHDLV 186 (323)
Q Consensus 182 -~~dlV 186 (323)
.+|+|
T Consensus 299 si~d~i 304 (310)
T COG0167 299 SIQDII 304 (310)
T ss_pred CHHHHh
Confidence 77776
No 23
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.36 E-value=1.6e+02 Score=24.92 Aligned_cols=61 Identities=11% Similarity=0.235 Sum_probs=41.5
Q ss_pred ccCcccCCCchHHHHHHHHHHHHHHcCCcchhcccceeeccccccCCCceeeecCCCCCccccCCCCCCCCcchhHHHHH
Q 020635 26 RKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDSTESNSGEKDALPNETLGGFDVIEEV 105 (323)
Q Consensus 26 ~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~l~g~~~I~~i 105 (323)
+.+|-.++--+ |.-|.+.+...+.....+.|.=||+|+-- ..+-..|+-|+|++++.+|
T Consensus 35 s~~~~~~~vhD-eeHIkeHLegki~~~a~mtpeqlqfHYF~--------------------MHDldknn~lDGiEl~kAi 93 (144)
T KOG4065|consen 35 SMGLDKKEVHD-EEHIKEHLEGKIEKVAKMTPEQLQFHYFS--------------------MHDLDKNNFLDGIELLKAI 93 (144)
T ss_pred ccccccccccc-HHHHHHHHhcccchhhhCCHHHHhhhhhh--------------------hhccCcCCcchHHHHHHHH
Confidence 45666665544 44568888888887778899988887632 2233346678899888777
Q ss_pred HH
Q 020635 106 KT 107 (323)
Q Consensus 106 K~ 107 (323)
--
T Consensus 94 TH 95 (144)
T KOG4065|consen 94 TH 95 (144)
T ss_pred HH
Confidence 43
No 24
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=25.31 E-value=54 Score=28.04 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHCCCCccCc-EeEeccccccccc
Q 020635 166 FNFSSLQQSFENNGLTVHDL-VVLSGGHTLGVGR 198 (323)
Q Consensus 166 ~~~~~l~~~F~~~Gl~~~dl-VaLsGaHTiG~~h 198 (323)
+++.+.+-.|+++||++.++ |.|--+|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 34556667999999999886 5556999999876
No 25
>PLN02826 dihydroorotate dehydrogenase
Probab=23.88 E-value=1.6e+02 Score=29.81 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=49.0
Q ss_pred hhccccee--ec--c-------ccccCCCceeeecCCCCCcc--ccCC--CCCCCCc-------chhHHHHHHHHHHhh-
Q 020635 56 AAKLLRVH--FH--D-------CFVRGCDASVLIDSTESNSG--EKDA--LPNETLG-------GFDVIEEVKTELEKK- 112 (323)
Q Consensus 56 a~~llRL~--FH--D-------cfv~GcDgSill~~~~~~~~--E~~~--~~N~~l~-------g~~~I~~iK~~le~~- 112 (323)
.|-++.+. +. | +--.|+||=|+.+.+.+... +... .+..||. .+++|..+...+...
T Consensus 263 ~Pv~vKlaPdl~~~di~~ia~~a~~~G~dGIi~~NTt~~r~~dl~~~~~~~~~GGlSG~pl~~~sl~~v~~l~~~~~~~i 342 (409)
T PLN02826 263 PPLLVKIAPDLSKEDLEDIAAVALALGIDGLIISNTTISRPDSVLGHPHADEAGGLSGKPLFDLSTEVLREMYRLTRGKI 342 (409)
T ss_pred CceEEecCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCcCccchhcccccccCCCcCCccccHHHHHHHHHHHHHhCCCC
Confidence 67788773 33 2 23479999999886542211 1101 1122442 467888888777543
Q ss_pred ----CCCCccHHHHHHh--hhhhhhhhc
Q 020635 113 ----CPGIVSCADIVAL--AARDSVSFQ 134 (323)
Q Consensus 113 ----cp~~VScADilal--Aar~aV~~~ 134 (323)
|.|+-|..|++.+ |+.++|++.
T Consensus 343 pIIgvGGI~sg~Da~e~i~AGAs~VQv~ 370 (409)
T PLN02826 343 PLVGCGGVSSGEDAYKKIRAGASLVQLY 370 (409)
T ss_pred cEEEECCCCCHHHHHHHHHhCCCeeeec
Confidence 4477788899874 778888876
No 26
>KOG3803 consensus Transcription factor containing C2HC type Zn finger [Transcription]
Probab=23.75 E-value=51 Score=35.16 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=25.7
Q ss_pred CCCchHHHHHHHHHHHHHHcCCcchhcccceeeccccccCCCceeeecC
Q 020635 32 ETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDCFVRGCDASVLIDS 80 (323)
Q Consensus 32 ~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~ 80 (323)
.-||-+++++|..|...-+. --|-+-|||||=-+..
T Consensus 670 sgcpladks~Rslma~~sqe-------------LkCPTPGCDGSGHiTG 705 (968)
T KOG3803|consen 670 SGCPLADKSLRSLMAAGSQE-------------LKCPTPGCDGSGHITG 705 (968)
T ss_pred cCCchhHHHHHHHHhccccc-------------ccCCCCCCCCCCcccc
Confidence 34999999999877654222 1366899999987653
No 27
>PF15240 Pro-rich: Proline-rich
Probab=23.03 E-value=50 Score=29.62 Aligned_cols=19 Identities=32% Similarity=0.261 Sum_probs=8.0
Q ss_pred HHHHHHHHHhhhcCCCCCc
Q 020635 8 FLISLVAALGACSTGGELR 26 (323)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~ 26 (323)
|||||..+|+++|++..+.
T Consensus 2 LlVLLSvALLALSSAQ~~d 20 (179)
T PF15240_consen 2 LLVLLSVALLALSSAQSTD 20 (179)
T ss_pred hhHHHHHHHHHhhhccccc
Confidence 4443434444443444343
No 28
>PRK01844 hypothetical protein; Provisional
Probab=22.82 E-value=40 Score=25.81 Aligned_cols=34 Identities=15% Similarity=0.379 Sum_probs=28.2
Q ss_pred CccCcccCCCchHHHHHHHHHHHHHHcCCcchhcccceeeccc
Q 020635 25 LRKNFYEETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFHDC 67 (323)
Q Consensus 25 l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc 67 (323)
+--||| +-|+.+++.++++|.+-...||.-|--.
T Consensus 18 ~~~Gff---------~ark~~~k~lk~NPpine~mir~Mm~QM 51 (72)
T PRK01844 18 VALGFF---------IARKYMMNYLQKNPPINEQMLKMMMMQM 51 (72)
T ss_pred HHHHHH---------HHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 455677 7799999999999999999999877644
No 29
>PF08782 c-SKI_SMAD_bind: c-SKI Smad4 binding domain; InterPro: IPR014890 c-SKI is an oncoprotein that inhibits TGF-beta signalling through interaction with Smad proteins []. This protein binds to Smad4 [].; GO: 0005634 nucleus; PDB: 1MR1_C.
Probab=21.98 E-value=31 Score=27.82 Aligned_cols=15 Identities=40% Similarity=1.112 Sum_probs=9.8
Q ss_pred eeccccccCCCceeee
Q 020635 63 HFHDCFVRGCDASVLI 78 (323)
Q Consensus 63 ~FHDcfv~GcDgSill 78 (323)
.+|+|| +||.|+++-
T Consensus 4 V~HeC~-g~c~G~f~P 18 (96)
T PF08782_consen 4 VYHECF-GGCRGSFIP 18 (96)
T ss_dssp EEE-ST-T-EEEEE-G
T ss_pred eEEeec-CccceEech
Confidence 479997 799999874
No 30
>PF06764 DUF1223: Protein of unknown function (DUF1223); InterPro: IPR010634 This family consists of several hypothetical proteins of around 250 residues in length, which are found in both plants and bacteria. The function of this family is unknown.; PDB: 2AXO_A.
Probab=20.16 E-value=86 Score=28.54 Aligned_cols=25 Identities=20% Similarity=0.691 Sum_probs=19.7
Q ss_pred CCCchHHHHHHHHHHHHHHcCCcchhcccceeec
Q 020635 32 ETCPEAENIVHNIVWKNAALNPTLAAKLLRVHFH 65 (323)
Q Consensus 32 ~sCp~~e~iV~~~v~~~~~~~~~~a~~llRL~FH 65 (323)
+|||.|+..+.+...+ +.+|=|.||
T Consensus 11 sSCPpAD~~L~~l~~~---------~~Vi~LafH 35 (202)
T PF06764_consen 11 SSCPPADRLLSELAAR---------PDVIALAFH 35 (202)
T ss_dssp TT-HHHHHHHHHHHHH---------TSSEEEEEE
T ss_pred CCCcHHHHHHHHhhcC---------CCEEEEEec
Confidence 6899999988877666 477889999
Done!