BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020639
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/323 (98%), Positives = 322/323 (99%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
Query: 61 LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
LTRAADDDEWGPEKEKE GGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61 LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
Query: 181 TIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPE 240
TIDSENFTVQNSI+FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQVTDSLV+PE
Sbjct: 181 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE 240
Query: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300
NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDL 300
Query: 301 RISRADAGSVFVFIKEGSPLLMP 323
RISRADAGSVFVFIKEGSPLLMP
Sbjct: 301 RISRADAGSVFVFIKEGSPLLMP 323
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/326 (72%), Positives = 270/326 (82%), Gaps = 3/326 (0%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240
Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
+PENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLD 300
Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
++LRISR DAGSVFV IKEGSPLL P
Sbjct: 301 DELRISRGDAGSVFVLIKEGSPLLKP 326
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/326 (71%), Positives = 269/326 (82%), Gaps = 3/326 (0%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S + +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240
Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
+PENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD
Sbjct: 241 LPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLD 300
Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
++LRI R DAGSVFV IKEGSPLL P
Sbjct: 301 DELRIPRGDAGSVFVLIKEGSPLLKP 326
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/327 (69%), Positives = 266/327 (81%), Gaps = 13/327 (3%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 59
MA +SQ NQ PCKTL+ NPP Q TSKPS+ P+ S+ +R+ A KS +S+ RP
Sbjct: 1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISV------RPA 54
Query: 60 VLTRAA-DDDEWGPEKEKEEGG----ALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGL 114
RA +DDEWG +K+++ G A+A EEE P E +EI LKKALVDSFYGTDRGL
Sbjct: 55 FKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGL 114
Query: 115 NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLAR 174
+ +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR LPL +
Sbjct: 115 RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVK 173
Query: 175 VEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTD 234
VEEISQTIDSEN TVQNS++F+GPLATTSI+TNAKFEVRSP RV IKFEEG+IGTPQ+TD
Sbjct: 174 VEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTD 233
Query: 235 SLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTT 294
S+VIP+NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP+KFSISN+ +SWLLTT
Sbjct: 234 SIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTT 293
Query: 295 YLDEDLRISRADAGSVFVFIKEGSPLL 321
YLDEDLRISR D GSVFV +KEGS L
Sbjct: 294 YLDEDLRISRGDGGSVFVLLKEGSSFL 320
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 258/326 (79%), Gaps = 10/326 (3%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARP 58
MA++ NQFPCKT Q+ +++ SKP S++P+++ L ++ F +R
Sbjct: 1 MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSA------LTRRPSFPPGEFAVSRS 54
Query: 59 LVLTRAAD-DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
R D +DE PE + G AL +AEE + + V E + LK++LVDS YGTDRGL+A+
Sbjct: 55 DFRVRVIDAEDELDPETSEGGGSALLMAEE-AIESVEETEVLKRSLVDSLYGTDRGLSAS 113
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+E
Sbjct: 114 SETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDE 173
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
ISQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSPKRVQIKFEEG+IGTPQ+TDS+
Sbjct: 174 ISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIE 233
Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLD 297
IPE VEFLGQKIDL+P +G+L+SVQDTA+SVA+TISSQPPLKFS+ +AQSWLLTTYLD
Sbjct: 234 IPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLD 293
Query: 298 EDLRISRADAGSVFVFIKEGSPLLMP 323
+D+RISR D GSVFV IKEGSPLL P
Sbjct: 294 KDIRISRGDGGSVFVLIKEGSPLLNP 319
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 249/324 (76%), Gaps = 15/324 (4%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ + QF C+T P+++ SKP L P+ S+ I R + +++ R +
Sbjct: 1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55
Query: 60 VLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
RA D E G + +A EE+ ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct: 56 FKVRATDTGEIG---------SALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSE 106
Query: 120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 179
TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF LFPLLSRG +PL +V+EIS
Sbjct: 107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166
Query: 180 QTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIP 239
QTIDS+NFTVQNS+RFAGPL T SISTNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS+ IP
Sbjct: 167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIP 226
Query: 240 ENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDED 299
E VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPPLKFS+ NAQSWLLTTYLD+D
Sbjct: 227 EYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKD 286
Query: 300 LRISRADAGSVFVFIKEGSPLLMP 323
+RISR D GSVFV IKEGSPLL P
Sbjct: 287 IRISRGDGGSVFVLIKEGSPLLNP 310
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/328 (62%), Positives = 253/328 (77%), Gaps = 15/328 (4%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ QFPCKTL+ + + + SK P +LP+NS+ ++S + G + RP
Sbjct: 1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51
Query: 60 VLTRAAD-DDEWGP---EKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLN 115
RA D DDEWG E+ ++VA++ + + V E + LK++L DS YGTDRGL+
Sbjct: 52 FKIRATDIDDEWGQDGVERVFASSSTVSVADK-AIESVEETERLKRSLADSLYGTDRGLS 110
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
+S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR PL +V
Sbjct: 111 VSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKV 170
Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 235
+EISQTIDS++FTVQNS+RFAGP +TTS STNAKFE+RSPKRVQIKFE+G+IGTPQ+TDS
Sbjct: 171 DEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDS 230
Query: 236 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 295
+ IPE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPPLKFS+ + N QSWLLTTY
Sbjct: 231 IEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTY 290
Query: 296 LDEDLRISRADAGSVFVFIKEGSPLLMP 323
LD+DLRISR D GSV+V IKEGS LL P
Sbjct: 291 LDKDLRISRGDGGSVYVLIKEGSSLLNP 318
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 242/328 (73%), Gaps = 21/328 (6%)
Query: 8 NQFPCKT-LSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRAR-------PL 59
+QF CKT ++ + + + P +LP+N + ++ + F RA P
Sbjct: 9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFK-----VRASDVNDEWGPD 63
Query: 60 VLTRAAD-DDEWGPEKEKEEGGALAVAEE---ESPKEVTEIDNLKKALVDSFYGTDRGLN 115
R D DDEWGPE G +VAE+ E+ + E + LK+ L S YGTDRGL+
Sbjct: 64 SKGRGGDVDDEWGPEI----GLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLS 119
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR PL +V
Sbjct: 120 ASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKV 179
Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDS 235
+EISQTIDS++FTV NS+RFA PLATTS+STNAKFEVRSPKRVQ+KFE+G+IGTPQ+TDS
Sbjct: 180 DEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDS 239
Query: 236 LVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 295
+ IPE VE LGQKIDL+P KG+L+SVQDTASSVA+TISSQPPLKFS+ +AQSWLLTTY
Sbjct: 240 IEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTY 299
Query: 296 LDEDLRISRADAGSVFVFIKEGSPLLMP 323
LD+DLRISR D GSVFV I+EGS LL P
Sbjct: 300 LDKDLRISRGDGGSVFVLIREGSSLLNP 327
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 347 bits (889), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/274 (67%), Positives = 213/274 (77%), Gaps = 7/274 (2%)
Query: 55 RARPLVLTRAA----DDDEWGPEKEKEEGGALAVAEEESPKE--VTEIDNLKKALVDSFY 108
RA P LT A +DEWG E ++GGA A E +E+ LK L ++ Y
Sbjct: 45 RAAPRRLTARAVAGDAEDEWGKEPAADQGGAAAAVAEAPADVPVTSEVAELKAKLKEALY 104
Query: 109 GTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRG 168
GT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPLL G
Sbjct: 105 GTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSG 164
Query: 169 TLP-LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGII 227
+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STNAKFEVRSPKRVQIKF+EGII
Sbjct: 165 SLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGII 224
Query: 228 GTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNA 287
GTPQ+TDS+V+PE E GQ IDL+P KGI SS+++ ASSVA+TIS QPPLK I NA
Sbjct: 225 GTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNA 284
Query: 288 QSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
+SWLLTTYLD++LRISR D S+FV KEGS LL
Sbjct: 285 ESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 165/260 (63%), Gaps = 13/260 (5%)
Query: 66 DDDEWGPE----KEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETR 121
++DEWG E E + G AV++ LK+ L DS YGT+ G A SE R
Sbjct: 124 NEDEWGGEIGGETEADAGNGSAVSDPTW--------ELKRCLADSVYGTELGFKAGSEVR 175
Query: 122 AEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQT 181
AE++EL+ QLEA NPTPAP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+
Sbjct: 176 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 235
Query: 182 IDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLVIPEN 241
ID+ N + NS + P A S S A FEVRSP R+++ F+EG + P + S+ +PE+
Sbjct: 236 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPES 295
Query: 242 VEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLR 301
V GQ+I LS K L+ +QD A+++++ +S QPPLK + SWLLTTYLD+DLR
Sbjct: 296 VGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLR 355
Query: 302 ISRADAGSVFVFIKEGSPLL 321
ISR D G +FV +EGS LL
Sbjct: 356 ISRGDGG-LFVLAREGSSLL 374
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 171/271 (63%), Gaps = 14/271 (5%)
Query: 64 AADDDEWGPEKEK-EEGGALAVAEEESPK-----EVTEIDN-------LKKALVDSFYGT 110
+A DEWG + E E AE + P E E D+ LK+ L D+ YGT
Sbjct: 89 SAVSDEWGEKSESVPEESVTRFAESDPPTNEDEWEEREADDGVDKTWELKRCLADTVYGT 148
Query: 111 DRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTL 170
+ G A SE RAE++E++ QLEA NPT AP E LL+ W+L+YT+FS L PLL+ G+
Sbjct: 149 ELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGST 208
Query: 171 PLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 230
PL +V+ ISQ+ID+++ ++ NS + P A S S A FEVR+P R+++ F+EG + P
Sbjct: 209 PLLKVKSISQSIDTKSLSIDNSTTLSSPFADFSFSATASFEVRTPSRIEVSFKEGTLKPP 268
Query: 231 QVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSW 290
++ S+ +PE+V GQ+I+LS K L+ +QD A+++++ IS QPPLK + SW
Sbjct: 269 EIKSSVDLPESVGVFGQEINLSFLKQSLNPLQDVAANISRAISGQPPLKLPFPGNRGSSW 328
Query: 291 LLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
LLTTYLD+DLRISR D G +FV +EGS LL
Sbjct: 329 LLTTYLDKDLRISRGDGG-LFVLAREGSSLL 358
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 224 bits (572), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 172/265 (64%), Gaps = 9/265 (3%)
Query: 62 TRAAD----DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
T AAD DDEWG + E E + LK+ LVD+ YG+D G A+
Sbjct: 111 TSAADPPTNDDEWGGDPAPP---PPPPPVPEEDNEEERREELKRCLVDTVYGSDLGFRAS 167
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SE R E++EL+TQLEA NPTP P +A LL WIL+YT++S L P+L+ G PL +V+E
Sbjct: 168 SEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDE 227
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSLV 237
ISQ ID+ + T+ N+ + P A+ S S A F+V+SP R++++F+EG P+++ S+
Sbjct: 228 ISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQPPKISSSVD 287
Query: 238 IPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSI-SNSNAQSWLLTTYL 296
+P V+ GQKI L P + +L+ +Q +S+A +IS QPPLK I N+ A+SWLLTTYL
Sbjct: 288 LPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRARSWLLTTYL 347
Query: 297 DEDLRISRADAGSVFVFIKEGSPLL 321
D+DLRISR D G +F+ +KEGSPLL
Sbjct: 348 DKDLRISRGDGG-LFILVKEGSPLL 371
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 96 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY 155
++ LK++LVD+ YGT+ G A SE RAE+ E + QLEA NPTPAP E LLN W+L+Y
Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLY 191
Query: 156 TSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSP 215
T+ S L PLL+ G+LPL ++++ISQTID+++FTV NS + P A+ S S +A FEVRSP
Sbjct: 192 TASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSP 251
Query: 216 KRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQ 275
R+Q+ F+EG + P++ + +PEN+ GQ++ L P L +++ +++++ IS Q
Sbjct: 252 TRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQ 311
Query: 276 PPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321
PLK I SWL+TTYLD+DLRISR D G +FV +EGS LL
Sbjct: 312 SPLKIPIPGERTSSWLITTYLDKDLRISRGDGG-LFVLAREGSSLL 356
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 IDNLKKALVDSFYGTDRGL-NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154
+ ++K+ L ++ G +RG+ S+ + EI L+ LE +NPTP PT L + W L+
Sbjct: 83 VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142
Query: 155 YTSFSGLFPLLSR-GTLPLARVEEISQTIDSENFTVQNSIRF---AGPLATTSISTNAKF 210
Y++ + L ++ G + ++ Q ID + ++F L A F
Sbjct: 143 YSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVASF 202
Query: 211 EVRSPKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAK 270
++ S V+I +E I Q+ + + +N++ L L F
Sbjct: 203 KISSKSSVEITYESSTIKPDQLMN--IFRKNMDLL-----LGIF---------------- 239
Query: 271 TISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVF 313
P F IS YLDEDL++ R G+VFV
Sbjct: 240 ----NPEGLFEIS-----------YLDEDLQVGRDGKGNVFVL 267
>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic
OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2
Length = 299
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY--TSFSGLFP---LLSRGTLP 171
T+ R ++ E IT LE NPTP PT + +W + + GL + R
Sbjct: 94 TNMQRIDVNERITSLERLNPTPRPTTS-PCFEGRWNFEWFGSGSPGLLAARVIFERFPST 152
Query: 172 LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
LA + + I N +I+ + + I ++K V P R++ ++ EG++ TP
Sbjct: 153 LANLSRMEILIKDANAKATANIKLLNSIE-SKIILSSKLTVEGPLRLKEEYVEGMLETPT 211
Query: 232 VTDSLVIPENVE-FLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSW 290
V + +PE ++ LGQ +++Q + + T++S L+ +S S + +
Sbjct: 212 VIEE-AVPEQLKSALGQAA---------TTLQQLPALIKDTLASG--LRIPLSGS-FERF 258
Query: 291 LLTTYLDEDLRISRADAG 308
+ +YLDE++ I R G
Sbjct: 259 FMISYLDEEILIVRDTEG 276
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 52/262 (19%)
Query: 82 LAVAEEESPKEVT-----EIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNP 136
+AVA E+ V ++++ K L+ + T RGL ATS+ R+ I E + +E N
Sbjct: 41 VAVASGETSARVVVDNELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNG 100
Query: 137 TPA--PTEALTLLNAKWILVYTS---FSGLFPLLSRGTLPLARVEEISQTID----SENF 187
P + L+ W L YTS LF SR LP +V ++ Q + S+
Sbjct: 101 GEEIDPVK----LDGTWRLQYTSAPDVVVLFEAASR--LPFFQVGQVFQKFECRDRSDGG 154
Query: 188 TVQNSIRFAGP-----LATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQVTDSL------ 236
++N ++++ P ++ AKF+ S + + ++FEE + + + L
Sbjct: 155 IIRNVVQWSLPSLLEEQEGATLVVTAKFDKVSSRNIYLQFEEISVRNININEQLQALIAP 214
Query: 237 -VIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLT-T 294
++P + FL + L F +T +Q P+ + + L +
Sbjct: 215 AILPRS--FL--SLQLLQF--------------IRTFKAQIPVNATSPGRRSVGGLYYLS 256
Query: 295 YLDEDLRISRA-DAGSVFVFIK 315
YLD ++ + R+ G VFVF K
Sbjct: 257 YLDNNMLLGRSVGGGGVFVFTK 278
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS 157
LK+ L+++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L+YT+
Sbjct: 74 LKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKS-DLVNGKWELIYTT 131
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 286 NAQSWLLTTYLDEDLRISRADAGSVFVF 313
+A+ L TY+DE+LR+SR D G++F+
Sbjct: 204 SARGELEITYVDEELRLSRGDKGNLFIL 231
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
LK LV++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L+YT+
Sbjct: 65 LKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKS-DLINGKWELIYTTS 123
Query: 159 SGLF 162
+ +
Sbjct: 124 AAIL 127
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 48/223 (21%)
Query: 103 LVDSFYGTD-RGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGL 161
L+D+ G RG +A+ + ++ + LE PT++ L+ +W L++T+ G
Sbjct: 78 LIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS-DLIEGRWRLMFTTRPGT 136
Query: 162 FPLLSRGTLPLARVEEISQTI---DSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRV 218
+ R T V + Q + + + V N ++F+ + + A ++ KRV
Sbjct: 137 ASPIQR-TFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGELKVEAVA--SIKDGKRV 193
Query: 219 QIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPL 278
+F+ +++FL PFK P+
Sbjct: 194 LFRFDRAAF-------------DLKFL-------PFK------------------VPYPV 215
Query: 279 KFSISNSNAQSWLLTTYL--DEDLRISRADAGSVFVFIKEGSP 319
F + A+ WL TTYL +LRISR + G+ FV KE P
Sbjct: 216 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKETVP 258
>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic
OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1
Length = 308
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 117 TSETRAEIVELITQLEAKNPTPAPTEALTL---LNAKWILVYTSFS-GLFPLLSRGTLPL 172
T + ++ E IT LE NPTP PT + L + +W V T S + + R L
Sbjct: 99 TDMQKIDVNERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTL 158
Query: 173 ARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQV 232
+ + I N +I+ + I+ ++K + P R++ ++ EG++ +P V
Sbjct: 159 VSLSNMEIFIKDNNTKATANIKLLNSIE-NKITLSSKLTIEGPLRMKEEYLEGLLESPTV 217
Query: 233 TDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLL 292
+ V + LGQ + + + ++DT ++ + PL Q + +
Sbjct: 218 IEEAVPDQLRGLLGQAT--TTLQQLPEPIKDTLANGLRI-----PL-----GGTYQRFFM 265
Query: 293 TTYLDEDLRISRADAG 308
+YLD+++ I R AG
Sbjct: 266 ISYLDDEILIVRDTAG 281
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 48/220 (21%)
Query: 109 GTDRGLNATSET--RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYT------SFSG 160
G +RGL A+ + RAE+ +LE T+ L L KW L+Y+ S G
Sbjct: 97 GLNRGLVASVDDLERAEVAA--KELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGG 154
Query: 161 LFPLLSRGTLPLARVEEISQTID--SENFTVQNSIRFAGPLATTSISTNA----KFEVRS 214
P L G L + ++ Q ID S++F + P + A KFE+
Sbjct: 155 SRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLG 214
Query: 215 PKRVQIKFEEGIIGTPQVTDSLVIPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISS 274
+++I FE+ + T G + PF
Sbjct: 215 TCKIKITFEKTTVKTS---------------GNLSQIPPFD-----------------IP 242
Query: 275 QPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFI 314
+ P F S++ TY+D+ +RI+R D G + VF+
Sbjct: 243 RLPDSFRPSSNPGTGDFEVTYVDDTMRITRGDRGELRVFV 282
>sp|Q9YAC2|ATGT_AERPE tRNA-guanine(15) transglycosylase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=tgtA PE=3 SV=1
Length = 512
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 135 NPTPAPTEALTLLNA-KWILVYTSFSGLFPLLSRGTLP 171
+P P P + +++ +WIL Y F G+FP+ + G P
Sbjct: 405 DPKPEPGQCESMVGGGEWILFYQPFLGVFPVEACGAYP 442
>sp|Q0H8X8|AI2_USTMA Probable intron-encoded endonuclease aI2 OS=Ustilago maydis (strain
521 / FGSC 9021) GN=aI2 PE=3 SV=2
Length = 533
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 132 EAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTID 183
N + +A++++ W++ +T G F ++ +G L L EISQ +D
Sbjct: 391 NVNNQVTSILDAMSVMTKSWLIGFTEAEGSFYIVKKGPLRLVHAFEISQKLD 442
>sp|Q9SD67|FTSH7_ARATH ATP-dependent zinc metalloprotease FTSH 7, chloroplastic
OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 12 CKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDE 69
C+ QNP N+F S LPL +++ + F GF+R + ++ +DD+
Sbjct: 37 CRVYRQNP--NRFVSNSITLPLQKKQVTVLRNHERFNLWDGFSRKKSRLVVNCQEDDQ 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,143,805
Number of Sequences: 539616
Number of extensions: 4386299
Number of successful extensions: 10832
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10779
Number of HSP's gapped (non-prelim): 56
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)